trd_0010	PWY-5686	UMP biosynthesis
trd_0025	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
trd_0026	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
trd_0031	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
trd_0035	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
trd_0035	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
trd_0059	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
trd_0059	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
trd_0060	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
trd_0060	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
trd_0060	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
trd_0061	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
trd_0061	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
trd_0063	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
trd_0063	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
trd_0064	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
trd_0064	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
trd_0065	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
trd_0065	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
trd_0095	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
trd_0102	PWY-5958	acridone alkaloid biosynthesis
trd_0102	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
trd_0102	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
trd_0103	PWY-5958	acridone alkaloid biosynthesis
trd_0103	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
trd_0103	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
trd_0109	PWY-3461	L-tyrosine biosynthesis II
trd_0109	PWY-3462	L-phenylalanine biosynthesis II
trd_0109	PWY-6120	L-tyrosine biosynthesis III
trd_0109	PWY-6627	salinosporamide A biosynthesis
trd_0110	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
trd_0110	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
trd_0110	PWY-6164	3-dehydroquinate biosynthesis I
trd_0117	PWY-5392	reductive TCA cycle II
trd_0117	PWY-5537	pyruvate fermentation to acetate V
trd_0117	PWY-5538	pyruvate fermentation to acetate VI
trd_0117	PWY-5690	TCA cycle II (plants and fungi)
trd_0117	PWY-5913	TCA cycle VI (obligate autotrophs)
trd_0117	PWY-6728	methylaspartate cycle
trd_0117	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
trd_0117	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
trd_0132	PWY-5532	adenosine nucleotides degradation IV
trd_0132	PWY-5723	Rubisco shunt
trd_0142	PWY-6984	lipoate salvage II
trd_0142	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
trd_0142	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
trd_0166	PWY-4983	L-citrulline-nitric oxide cycle
trd_0166	PWY-4984	urea cycle
trd_0166	PWY-5	canavanine biosynthesis
trd_0166	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
trd_0166	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
trd_0168	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
trd_0168	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
trd_0168	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
trd_0170	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
trd_0170	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
trd_0172	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
trd_0172	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
trd_0172	PWY-6896	thiamin salvage I
trd_0172	PWY-6897	thiamin salvage II
trd_0173	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
trd_0178	PWY-2301	<i>myo</i>-inositol biosynthesis
trd_0178	PWY-4702	phytate degradation I
trd_0178	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
trd_0195	PWY-4202	arsenate detoxification I (glutaredoxin)
trd_0195	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
trd_0195	PWY-6608	guanosine nucleotides degradation III
trd_0195	PWY-6609	adenine and adenosine salvage III
trd_0195	PWY-6611	adenine and adenosine salvage V
trd_0195	PWY-6620	guanine and guanosine salvage
trd_0195	PWY-6627	salinosporamide A biosynthesis
trd_0195	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
trd_0195	PWY-7179	purine deoxyribonucleosides degradation I
trd_0195	PWY-7179-1	purine deoxyribonucleosides degradation
trd_0197	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
trd_0197	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
trd_0197	PWY-7242	D-fructuronate degradation
trd_0197	PWY-7310	D-glucosaminate degradation
trd_0199	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
trd_0199	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
trd_0199	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
trd_0201	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
trd_0201	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
trd_0201	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
trd_0201	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
trd_0201	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
trd_0201	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
trd_0209	PWY-5686	UMP biosynthesis
trd_0212	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
trd_0212	PWY-5686	UMP biosynthesis
trd_0212	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
trd_0213	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
trd_0213	PWY-5686	UMP biosynthesis
trd_0213	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
trd_0214	PWY-5686	UMP biosynthesis
trd_0217	PWY-6834	spermidine biosynthesis III
trd_0226	PWY-6829	tRNA methylation (yeast)
trd_0226	PWY-7285	methylwyosine biosynthesis
trd_0226	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
trd_0229	PWY-3221	dTDP-L-rhamnose biosynthesis II
trd_0229	PWY-6808	dTDP-D-forosamine biosynthesis
trd_0229	PWY-6942	dTDP-D-desosamine biosynthesis
trd_0229	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
trd_0229	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
trd_0229	PWY-6974	dTDP-L-olivose biosynthesis
trd_0229	PWY-6976	dTDP-L-mycarose biosynthesis
trd_0229	PWY-7104	dTDP-L-megosamine biosynthesis
trd_0229	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
trd_0229	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
trd_0229	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
trd_0229	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
trd_0229	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
trd_0229	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
trd_0229	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
trd_0229	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
trd_0234	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
trd_0235	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
trd_0260	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
trd_0260	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
trd_0261	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
trd_0261	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
trd_0295	PWY-6599	guanine and guanosine salvage II
trd_0295	PWY-6609	adenine and adenosine salvage III
trd_0295	PWY-6610	adenine and adenosine salvage IV
trd_0295	PWY-6620	guanine and guanosine salvage
trd_0306	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
trd_0306	PWY-6549	L-glutamine biosynthesis III
trd_0306	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
trd_0306	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
trd_0308	PWY-6854	ethylene biosynthesis III (microbes)
trd_0309	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
trd_0322	PWY-5419	catechol degradation to 2-oxopent-4-enoate II
trd_0322	PWY-5641	2-nitrotoluene degradation
trd_0330	PWY-3781	aerobic respiration I (cytochrome c)
trd_0330	PWY-4302	aerobic respiration III (alternative oxidase pathway)
trd_0330	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
trd_0330	PWY-5690	TCA cycle II (plants and fungi)
trd_0330	PWY-6728	methylaspartate cycle
trd_0330	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
trd_0330	PWY-7254	TCA cycle VII (acetate-producers)
trd_0330	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
trd_0331	PWY-3781	aerobic respiration I (cytochrome c)
trd_0331	PWY-4302	aerobic respiration III (alternative oxidase pathway)
trd_0331	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
trd_0331	PWY-5690	TCA cycle II (plants and fungi)
trd_0331	PWY-6728	methylaspartate cycle
trd_0331	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
trd_0331	PWY-7254	TCA cycle VII (acetate-producers)
trd_0331	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
trd_0336	PWY-5484	glycolysis II (from fructose 6-phosphate)
trd_0337	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
trd_0358	PWY-4041	&gamma;-glutamyl cycle
trd_0358	PWY-5826	hypoglycin biosynthesis
trd_0359	PWY-5964	guanylyl molybdenum cofactor biosynthesis
trd_0365	PWY-5101	L-isoleucine biosynthesis II
trd_0365	PWY-6871	3-methylbutanol biosynthesis
trd_0366	PWY-2941	L-lysine biosynthesis II
trd_0366	PWY-2942	L-lysine biosynthesis III
trd_0366	PWY-5097	L-lysine biosynthesis VI
trd_0366	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
trd_0366	PWY-6559	spermidine biosynthesis II
trd_0366	PWY-6562	norspermidine biosynthesis
trd_0366	PWY-7153	grixazone biosynthesis
trd_0366	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
trd_0368	PWY-5344	L-homocysteine biosynthesis
trd_0378	PWY-6823	molybdenum cofactor biosynthesis
trd_0378	PWY-6891	thiazole biosynthesis II (Bacillus)
trd_0378	PWY-6892	thiazole biosynthesis I (E. coli)
trd_0378	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
trd_0398	PWY-6910	hydroxymethylpyrimidine salvage
trd_0398	PWY-7356	thiamin salvage IV (yeast)
trd_0398	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
trd_0399	PWY-6891	thiazole biosynthesis II (Bacillus)
trd_0399	PWY-6892	thiazole biosynthesis I (E. coli)
trd_0400	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
trd_0400	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
trd_0400	PWY-6897	thiamin salvage II
trd_0400	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
trd_0400	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
trd_0400	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
trd_0400	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
trd_0401	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
trd_0401	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
trd_0401	PWY-6897	thiamin salvage II
trd_0401	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
trd_0401	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
trd_0401	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
trd_0401	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
trd_0413	PWY-2941	L-lysine biosynthesis II
trd_0413	PWY-2942	L-lysine biosynthesis III
trd_0413	PWY-5097	L-lysine biosynthesis VI
trd_0414	PWY-2941	L-lysine biosynthesis II
trd_0414	PWY-2942	L-lysine biosynthesis III
trd_0414	PWY-5097	L-lysine biosynthesis VI
trd_0438	PWY-7205	CMP phosphorylation
trd_0447	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
trd_0447	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
trd_0447	PWY-6936	seleno-amino acid biosynthesis
trd_0447	PWY-702	L-methionine biosynthesis II
trd_0448	PWY-3162	L-tryptophan degradation V (side chain pathway)
trd_0448	PWY-5057	L-valine degradation II
trd_0448	PWY-5076	L-leucine degradation III
trd_0448	PWY-5078	L-isoleucine degradation II
trd_0448	PWY-5079	L-phenylalanine degradation III
trd_0448	PWY-5082	L-methionine degradation III
trd_0448	PWY-5480	pyruvate fermentation to ethanol I
trd_0448	PWY-5486	pyruvate fermentation to ethanol II
trd_0448	PWY-5751	phenylethanol biosynthesis
trd_0448	PWY-6028	acetoin degradation
trd_0448	PWY-6313	serotonin degradation
trd_0448	PWY-6333	acetaldehyde biosynthesis I
trd_0448	PWY-6342	noradrenaline and adrenaline degradation
trd_0448	PWY-6587	pyruvate fermentation to ethanol III
trd_0448	PWY-6802	salidroside biosynthesis
trd_0448	PWY-6871	3-methylbutanol biosynthesis
trd_0448	PWY-7013	L-1,2-propanediol degradation
trd_0448	PWY-7111	pyruvate fermentation to isobutanol (engineered)
trd_0448	PWY-7118	chitin degradation to ethanol
trd_0448	PWY-7396	butanol and isobutanol biosynthesis (engineered)
trd_0448	PWY-7557	dehydrodiconiferyl alcohol degradation
trd_0449	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
trd_0449	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
trd_0449	PWY-6164	3-dehydroquinate biosynthesis I
trd_0459	PWY-5381	pyridine nucleotide cycling (plants)
trd_0459	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
trd_0476	PWY-6891	thiazole biosynthesis II (Bacillus)
trd_0476	PWY-6892	thiazole biosynthesis I (E. coli)
trd_0476	PWY-7560	methylerythritol phosphate pathway II
trd_0478	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
trd_0478	PWY-5723	Rubisco shunt
trd_0495	PWY-6728	methylaspartate cycle
trd_0495	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
trd_0495	PWY-7118	chitin degradation to ethanol
trd_0495	PWY-7294	xylose degradation IV
trd_0495	PWY-7295	L-arabinose degradation IV
trd_0503	PWY-6167	flavin biosynthesis II (archaea)
trd_0503	PWY-6168	flavin biosynthesis III (fungi)
trd_0503	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
trd_0504	PWY-6167	flavin biosynthesis II (archaea)
trd_0504	PWY-6168	flavin biosynthesis III (fungi)
trd_0504	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
trd_0505	PWY-6167	flavin biosynthesis II (archaea)
trd_0505	PWY-6168	flavin biosynthesis III (fungi)
trd_0513	PWY-5988	wound-induced proteolysis I
trd_0513	PWY-6018	seed germination protein turnover
trd_0517	PWY-5350	thiosulfate disproportionation III (rhodanese)
trd_0524	PWY-2161	folate polyglutamylation
trd_0528	PWY-40	putrescine biosynthesis I
trd_0528	PWY-6305	putrescine biosynthesis IV
trd_0529	PWY-40	putrescine biosynthesis I
trd_0529	PWY-6305	putrescine biosynthesis IV
trd_0531	PWY-5704	urea degradation II
trd_0532	PWY-5704	urea degradation II
trd_0533	PWY-5704	urea degradation II
trd_0539	PWY-6899	base-degraded thiamin salvage
trd_0539	PWY-7356	thiamin salvage IV (yeast)
trd_0542	PWY-3221	dTDP-L-rhamnose biosynthesis II
trd_0542	PWY-6808	dTDP-D-forosamine biosynthesis
trd_0542	PWY-6942	dTDP-D-desosamine biosynthesis
trd_0542	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
trd_0542	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
trd_0542	PWY-6974	dTDP-L-olivose biosynthesis
trd_0542	PWY-6976	dTDP-L-mycarose biosynthesis
trd_0542	PWY-7104	dTDP-L-megosamine biosynthesis
trd_0542	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
trd_0542	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
trd_0542	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
trd_0542	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
trd_0542	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
trd_0542	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
trd_0542	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
trd_0542	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
trd_0546	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
trd_0547	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
trd_0547	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
trd_0547	PWY-6268	adenosylcobalamin salvage from cobalamin
trd_0547	PWY-6269	adenosylcobalamin salvage from cobinamide II
trd_0558	PWY-3781	aerobic respiration I (cytochrome c)
trd_0558	PWY-4521	arsenite oxidation I (respiratory)
trd_0558	PWY-6692	Fe(II) oxidation
trd_0558	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
trd_0561	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
trd_0562	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
trd_0573	PWY-5392	reductive TCA cycle II
trd_0573	PWY-5537	pyruvate fermentation to acetate V
trd_0573	PWY-5538	pyruvate fermentation to acetate VI
trd_0573	PWY-5690	TCA cycle II (plants and fungi)
trd_0573	PWY-5913	TCA cycle VI (obligate autotrophs)
trd_0573	PWY-6728	methylaspartate cycle
trd_0573	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
trd_0573	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
trd_0580	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
trd_0580	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
trd_0581	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
trd_0581	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
trd_0582	PWY-3162	L-tryptophan degradation V (side chain pathway)
trd_0582	PWY-5057	L-valine degradation II
trd_0582	PWY-5076	L-leucine degradation III
trd_0582	PWY-5078	L-isoleucine degradation II
trd_0582	PWY-5079	L-phenylalanine degradation III
trd_0582	PWY-5082	L-methionine degradation III
trd_0582	PWY-5480	pyruvate fermentation to ethanol I
trd_0582	PWY-5486	pyruvate fermentation to ethanol II
trd_0582	PWY-5751	phenylethanol biosynthesis
trd_0582	PWY-6028	acetoin degradation
trd_0582	PWY-6313	serotonin degradation
trd_0582	PWY-6333	acetaldehyde biosynthesis I
trd_0582	PWY-6342	noradrenaline and adrenaline degradation
trd_0582	PWY-6587	pyruvate fermentation to ethanol III
trd_0582	PWY-6802	salidroside biosynthesis
trd_0582	PWY-6871	3-methylbutanol biosynthesis
trd_0582	PWY-7013	L-1,2-propanediol degradation
trd_0582	PWY-7111	pyruvate fermentation to isobutanol (engineered)
trd_0582	PWY-7118	chitin degradation to ethanol
trd_0582	PWY-7396	butanol and isobutanol biosynthesis (engineered)
trd_0582	PWY-7557	dehydrodiconiferyl alcohol degradation
trd_0595	PWY-5316	nicotine biosynthesis
trd_0595	PWY-5381	pyridine nucleotide cycling (plants)
trd_0595	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
trd_0595	PWY-7342	superpathway of nicotine biosynthesis
trd_0596	PWY-5316	nicotine biosynthesis
trd_0596	PWY-7342	superpathway of nicotine biosynthesis
trd_0604	PWY-4041	&gamma;-glutamyl cycle
trd_0604	PWY-5826	hypoglycin biosynthesis
trd_0607	PWY-6807	xyloglucan degradation II (exoglucanase)
trd_0608	PWY-1042	glycolysis IV (plant cytosol)
trd_0608	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
trd_0608	PWY-5484	glycolysis II (from fructose 6-phosphate)
trd_0608	PWY-7385	1,3-propanediol biosynthesis (engineered)
trd_0613	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
trd_0613	PWY-5723	Rubisco shunt
trd_0625	PWY-5101	L-isoleucine biosynthesis II
trd_0625	PWY-5103	L-isoleucine biosynthesis III
trd_0625	PWY-5104	L-isoleucine biosynthesis IV
trd_0625	PWY-7111	pyruvate fermentation to isobutanol (engineered)
trd_0626	PWY-5101	L-isoleucine biosynthesis II
trd_0626	PWY-5103	L-isoleucine biosynthesis III
trd_0626	PWY-5104	L-isoleucine biosynthesis IV
trd_0626	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
trd_0626	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
trd_0626	PWY-6389	(<i>S</i>)-acetoin biosynthesis
trd_0626	PWY-7111	pyruvate fermentation to isobutanol (engineered)
trd_0627	PWY-5101	L-isoleucine biosynthesis II
trd_0627	PWY-5103	L-isoleucine biosynthesis III
trd_0627	PWY-5104	L-isoleucine biosynthesis IV
trd_0627	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
trd_0627	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
trd_0627	PWY-6389	(<i>S</i>)-acetoin biosynthesis
trd_0627	PWY-7111	pyruvate fermentation to isobutanol (engineered)
trd_0642	PWY-1042	glycolysis IV (plant cytosol)
trd_0642	PWY-1622	formaldehyde assimilation I (serine pathway)
trd_0642	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
trd_0642	PWY-5484	glycolysis II (from fructose 6-phosphate)
trd_0642	PWY-5723	Rubisco shunt
trd_0642	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
trd_0642	PWY-6886	1-butanol autotrophic biosynthesis
trd_0642	PWY-6901	superpathway of glucose and xylose degradation
trd_0642	PWY-7003	glycerol degradation to butanol
trd_0642	PWY-7124	ethylene biosynthesis V (engineered)
trd_0642	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
trd_0643	PWY-1042	glycolysis IV (plant cytosol)
trd_0643	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
trd_0643	PWY-5484	glycolysis II (from fructose 6-phosphate)
trd_0643	PWY-5723	Rubisco shunt
trd_0643	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
trd_0643	PWY-6886	1-butanol autotrophic biosynthesis
trd_0643	PWY-6901	superpathway of glucose and xylose degradation
trd_0643	PWY-7003	glycerol degradation to butanol
trd_0643	PWY-7124	ethylene biosynthesis V (engineered)
trd_0643	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
trd_0644	PWY-5101	L-isoleucine biosynthesis II
trd_0644	PWY-5103	L-isoleucine biosynthesis III
trd_0644	PWY-5104	L-isoleucine biosynthesis IV
trd_0644	PWY-7111	pyruvate fermentation to isobutanol (engineered)
trd_0646	PWY-6123	inosine-5'-phosphate biosynthesis I
trd_0646	PWY-7234	inosine-5'-phosphate biosynthesis III
trd_0651	PWY-5381	pyridine nucleotide cycling (plants)
trd_0651	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
trd_0655	PWY-2301	<i>myo</i>-inositol biosynthesis
trd_0655	PWY-4661	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis III (<i>Spirodela polyrrhiza</i>)
trd_0655	PWY-6372	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis IV (<i>Dictyostelium</i>)
trd_0655	PWY-6580	phosphatidylinositol biosynthesis I (bacteria)
trd_0655	PWY-6664	di-myo-inositol phosphate biosynthesis
trd_0661	PWY-5971	palmitate biosynthesis II (bacteria and plants)
trd_0661	PWY-5973	<i>cis</i>-vaccenate biosynthesis
trd_0661	PWY-5989	stearate biosynthesis II (bacteria and plants)
trd_0661	PWY-5994	palmitate biosynthesis I (animals and fungi)
trd_0661	PWY-6113	superpathway of mycolate biosynthesis
trd_0661	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
trd_0661	PWY-6519	8-amino-7-oxononanoate biosynthesis I
trd_0661	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
trd_0661	PWYG-321	mycolate biosynthesis
trd_0662	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
trd_0708	PWY-3781	aerobic respiration I (cytochrome c)
trd_0708	PWY-4521	arsenite oxidation I (respiratory)
trd_0708	PWY-6692	Fe(II) oxidation
trd_0708	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
trd_0711	PWY-6672	<i>cis</i>-genanyl-CoA degradation
trd_0711	PWY-7118	chitin degradation to ethanol
trd_0716	PWY-6700	queuosine biosynthesis
trd_0733	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
trd_0733	PWY-2201	folate transformations I
trd_0733	PWY-3841	folate transformations II
trd_0733	PWY-5030	L-histidine degradation III
trd_0733	PWY-5497	purine nucleobases degradation II (anaerobic)
trd_0733	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
trd_0735	PWY-5030	L-histidine degradation III
trd_0735	PWY-5497	purine nucleobases degradation II (anaerobic)
trd_0741	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
trd_0743	PWY-6749	CMP-legionaminate biosynthesis I
trd_0745	PWY-6123	inosine-5'-phosphate biosynthesis I
trd_0745	PWY-6124	inosine-5'-phosphate biosynthesis II
trd_0745	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
trd_0745	PWY-7234	inosine-5'-phosphate biosynthesis III
trd_0746	PWY-6123	inosine-5'-phosphate biosynthesis I
trd_0746	PWY-6124	inosine-5'-phosphate biosynthesis II
trd_0746	PWY-7234	inosine-5'-phosphate biosynthesis III
trd_0747	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
trd_0747	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
trd_0747	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
trd_0748	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
trd_0748	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
trd_0748	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
trd_0749	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
trd_0749	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
trd_0749	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
trd_0750	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
trd_0750	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
trd_0750	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
trd_0750	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
trd_0755	PWY-1622	formaldehyde assimilation I (serine pathway)
trd_0755	PWY-181	photorespiration
trd_0755	PWY-2161	folate polyglutamylation
trd_0755	PWY-2201	folate transformations I
trd_0755	PWY-3661	glycine betaine degradation I
trd_0755	PWY-3661-1	glycine betaine degradation II (mammalian)
trd_0755	PWY-3841	folate transformations II
trd_0755	PWY-5497	purine nucleobases degradation II (anaerobic)
trd_0756	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
trd_0756	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
trd_0756	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
trd_0769	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
trd_0769	PWY-6167	flavin biosynthesis II (archaea)
trd_0769	PWY-6168	flavin biosynthesis III (fungi)
trd_0778	PWY-1042	glycolysis IV (plant cytosol)
trd_0778	PWY-5484	glycolysis II (from fructose 6-phosphate)
trd_0778	PWY-6901	superpathway of glucose and xylose degradation
trd_0778	PWY-7003	glycerol degradation to butanol
trd_0779	PWY-1042	glycolysis IV (plant cytosol)
trd_0779	PWY-5484	glycolysis II (from fructose 6-phosphate)
trd_0779	PWY-6886	1-butanol autotrophic biosynthesis
trd_0779	PWY-6901	superpathway of glucose and xylose degradation
trd_0779	PWY-7003	glycerol degradation to butanol
trd_0780	PWY-1042	glycolysis IV (plant cytosol)
trd_0780	PWY-5484	glycolysis II (from fructose 6-phosphate)
trd_0780	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
trd_0780	PWY-7003	glycerol degradation to butanol
trd_0805	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
trd_0805	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
trd_0805	PWY-6268	adenosylcobalamin salvage from cobalamin
trd_0805	PWY-6269	adenosylcobalamin salvage from cobinamide II
trd_0811	PWY-6700	queuosine biosynthesis
trd_0813	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
trd_0814	PWY-6012	acyl carrier protein metabolism I
trd_0814	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
trd_0815	PWY-6938	NADH repair
trd_0819	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
trd_0863	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
trd_0863	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
trd_0863	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
trd_0867	PWY-6123	inosine-5'-phosphate biosynthesis I
trd_0867	PWY-6124	inosine-5'-phosphate biosynthesis II
trd_0867	PWY-7234	inosine-5'-phosphate biosynthesis III
trd_0882	PWY-4381	fatty acid biosynthesis initiation I
trd_0882	PWY-5743	3-hydroxypropanoate cycle
trd_0882	PWY-5744	glyoxylate assimilation
trd_0882	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
trd_0882	PWY-6679	jadomycin biosynthesis
trd_0882	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
trd_0899	PWY-2201	folate transformations I
trd_0899	PWY-3841	folate transformations II
trd_0900	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
trd_0900	PWY-2161	folate polyglutamylation
trd_0900	PWY-2201	folate transformations I
trd_0900	PWY-3841	folate transformations II
trd_0912	PWY-7242	D-fructuronate degradation
trd_0917	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
trd_0917	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
trd_0918	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
trd_0919	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
trd_0919	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
trd_0920	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
trd_0920	PWY-6164	3-dehydroquinate biosynthesis I
trd_0921	PWY-1622	formaldehyde assimilation I (serine pathway)
trd_0921	PWY-5392	reductive TCA cycle II
trd_0921	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
trd_0921	PWY-5690	TCA cycle II (plants and fungi)
trd_0921	PWY-5913	TCA cycle VI (obligate autotrophs)
trd_0921	PWY-6728	methylaspartate cycle
trd_0921	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
trd_0921	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
trd_0921	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
trd_0923	PWY-6823	molybdenum cofactor biosynthesis
trd_0945	PWY-5381	pyridine nucleotide cycling (plants)
trd_0949	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
trd_0949	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
trd_0949	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
trd_0949	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
trd_0949	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
trd_0949	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
trd_0949	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
trd_0949	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
trd_0951	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
trd_0964	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
trd_1005	PWY-7560	methylerythritol phosphate pathway II
trd_1037	PWY-6832	2-aminoethylphosphonate degradation II
trd_1041	PWY-6823	molybdenum cofactor biosynthesis
trd_1049	PWY-2201	folate transformations I
trd_1049	PWY-3841	folate transformations II
trd_1058	PWY-7560	methylerythritol phosphate pathway II
trd_1060	PWY-1622	formaldehyde assimilation I (serine pathway)
trd_1060	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
trd_1060	PWY-5913	TCA cycle VI (obligate autotrophs)
trd_1060	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
trd_1060	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
trd_1060	PWY-6549	L-glutamine biosynthesis III
trd_1060	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
trd_1060	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
trd_1060	PWY-7124	ethylene biosynthesis V (engineered)
trd_1062	PWY-3961	phosphopantothenate biosynthesis II
trd_1068	PWY-7533	gliotoxin biosynthesis
trd_1096	PWY-1042	glycolysis IV (plant cytosol)
trd_1096	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
trd_1096	PWY-5484	glycolysis II (from fructose 6-phosphate)
trd_1096	PWY-6531	mannitol cycle
trd_1096	PWY-7385	1,3-propanediol biosynthesis (engineered)
trd_1098	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
trd_1098	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
trd_1122	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
trd_1123	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
trd_1124	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
trd_1124	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
trd_1125	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
trd_1125	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
trd_1127	PWY-5663	tetrahydrobiopterin biosynthesis I
trd_1127	PWY-5664	tetrahydrobiopterin biosynthesis II
trd_1127	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
trd_1127	PWY-6703	preQ<sub>0</sub> biosynthesis
trd_1127	PWY-6983	tetrahydrobiopterin biosynthesis III
trd_1127	PWY-7442	drosopterin and aurodrosopterin biosynthesis
trd_1141	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
trd_1141	PWY-3801	sucrose degradation II (sucrose synthase)
trd_1141	PWY-5054	sorbitol biosynthesis I
trd_1141	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
trd_1141	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
trd_1141	PWY-5659	GDP-mannose biosynthesis
trd_1141	PWY-5723	Rubisco shunt
trd_1141	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
trd_1141	PWY-621	sucrose degradation III (sucrose invertase)
trd_1141	PWY-622	starch biosynthesis
trd_1141	PWY-6531	mannitol cycle
trd_1141	PWY-6981	chitin biosynthesis
trd_1141	PWY-7238	sucrose biosynthesis II
trd_1141	PWY-7347	sucrose biosynthesis III
trd_1141	PWY-7385	1,3-propanediol biosynthesis (engineered)
trd_1143	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
trd_1146	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
trd_1146	PWY-6855	chitin degradation I (archaea)
trd_1146	PWY-6906	chitin derivatives degradation
trd_1164	PWY-7560	methylerythritol phosphate pathway II
trd_1165	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
trd_1165	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
trd_1172	PWY-5350	thiosulfate disproportionation III (rhodanese)
trd_1177	PWY-5663	tetrahydrobiopterin biosynthesis I
trd_1177	PWY-5664	tetrahydrobiopterin biosynthesis II
trd_1177	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
trd_1177	PWY-6703	preQ<sub>0</sub> biosynthesis
trd_1177	PWY-6983	tetrahydrobiopterin biosynthesis III
trd_1177	PWY-7442	drosopterin and aurodrosopterin biosynthesis
trd_1178	PWY-6749	CMP-legionaminate biosynthesis I
trd_1182	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
trd_1183	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
trd_1183	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
trd_1184	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
trd_1186	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
trd_1186	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
trd_1186	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
trd_1190	PWY-6610	adenine and adenosine salvage IV
trd_1226	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
trd_1226	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
trd_1228	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
trd_1230	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
trd_1236	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
trd_1236	PWY-7177	UTP and CTP dephosphorylation II
trd_1236	PWY-7185	UTP and CTP dephosphorylation I
trd_1251	PWY-702	L-methionine biosynthesis II
trd_1258	PWY-622	starch biosynthesis
trd_1259	PWY-622	starch biosynthesis
trd_1260	PWY-4381	fatty acid biosynthesis initiation I
trd_1260	PWY-5743	3-hydroxypropanoate cycle
trd_1260	PWY-5744	glyoxylate assimilation
trd_1260	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
trd_1260	PWY-6679	jadomycin biosynthesis
trd_1260	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
trd_1261	PWY-4381	fatty acid biosynthesis initiation I
trd_1261	PWY-5743	3-hydroxypropanoate cycle
trd_1261	PWY-5744	glyoxylate assimilation
trd_1261	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
trd_1261	PWY-6679	jadomycin biosynthesis
trd_1261	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
trd_1264	PWY-5686	UMP biosynthesis
trd_1276	PWY-6891	thiazole biosynthesis II (Bacillus)
trd_1276	PWY-6892	thiazole biosynthesis I (E. coli)
trd_1276	PWY-7560	methylerythritol phosphate pathway II
trd_1282	PWY-4981	L-proline biosynthesis II (from arginine)
trd_1302	PWY-5663	tetrahydrobiopterin biosynthesis I
trd_1302	PWY-5664	tetrahydrobiopterin biosynthesis II
trd_1302	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
trd_1302	PWY-6703	preQ<sub>0</sub> biosynthesis
trd_1302	PWY-6983	tetrahydrobiopterin biosynthesis III
trd_1302	PWY-7442	drosopterin and aurodrosopterin biosynthesis
trd_1305	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
trd_1307	PWY-7560	methylerythritol phosphate pathway II
trd_1315	PWY-3781	aerobic respiration I (cytochrome c)
trd_1315	PWY-4521	arsenite oxidation I (respiratory)
trd_1315	PWY-6692	Fe(II) oxidation
trd_1315	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
trd_1318	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
trd_1318	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
trd_1323	PWY-4261	glycerol degradation I
trd_1324	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
trd_1324	PWY-6148	tetrahydromethanopterin biosynthesis
trd_1324	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
trd_1324	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
trd_1325	PWY-6614	tetrahydrofolate biosynthesis
trd_1326	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
trd_1326	PWY-6148	tetrahydromethanopterin biosynthesis
trd_1326	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
trd_1326	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
trd_1331	PWY-4041	&gamma;-glutamyl cycle
trd_1331	PWY-5826	hypoglycin biosynthesis
trd_1349	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
trd_1349	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
trd_1349	PWY-6936	seleno-amino acid biosynthesis
trd_1349	PWY-702	L-methionine biosynthesis II
trd_1381	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
trd_1381	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
trd_1384	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
trd_1384	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
trd_1392	PWY-5162	2-oxopentenoate degradation
trd_1393	PWY-5162	2-oxopentenoate degradation
trd_1393	PWY-5436	L-threonine degradation IV
trd_1393	PWY-5480	pyruvate fermentation to ethanol I
trd_1393	PWY-6587	pyruvate fermentation to ethanol III
trd_1393	PWY-7085	triethylamine degradation
trd_1393	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
trd_1408	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
trd_1408	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
trd_1408	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
trd_1408	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
trd_1408	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
trd_1408	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
trd_1408	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
trd_1408	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
trd_1409	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
trd_1409	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
trd_1409	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
trd_1409	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
trd_1409	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
trd_1409	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
trd_1409	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
trd_1409	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
trd_1429	PWY-4981	L-proline biosynthesis II (from arginine)
trd_1429	PWY-4984	urea cycle
trd_1429	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
trd_1438	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
trd_1438	PWY-6596	adenosine nucleotides degradation I
trd_1438	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
trd_1445	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
trd_1445	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
trd_1461	PWY-2941	L-lysine biosynthesis II
trd_1461	PWY-2942	L-lysine biosynthesis III
trd_1461	PWY-5097	L-lysine biosynthesis VI
trd_1469	PWY-5392	reductive TCA cycle II
trd_1469	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
trd_1469	PWY-5690	TCA cycle II (plants and fungi)
trd_1469	PWY-5913	TCA cycle VI (obligate autotrophs)
trd_1469	PWY-6728	methylaspartate cycle
trd_1469	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
trd_1469	PWY-7254	TCA cycle VII (acetate-producers)
trd_1469	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
trd_1495	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
trd_1495	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
trd_1495	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
trd_1516	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
trd_1516	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
trd_1518	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
trd_1518	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
trd_1557	PWY-381	nitrate reduction II (assimilatory)
trd_1557	PWY-5675	nitrate reduction V (assimilatory)
trd_1557	PWY-6549	L-glutamine biosynthesis III
trd_1557	PWY-6963	ammonia assimilation cycle I
trd_1557	PWY-6964	ammonia assimilation cycle II
trd_1558	PWY-381	nitrate reduction II (assimilatory)
trd_1558	PWY-5675	nitrate reduction V (assimilatory)
trd_1558	PWY-6549	L-glutamine biosynthesis III
trd_1558	PWY-6963	ammonia assimilation cycle I
trd_1558	PWY-6964	ammonia assimilation cycle II
trd_1560	PWY-5743	3-hydroxypropanoate cycle
trd_1560	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
trd_1560	PWY-6728	methylaspartate cycle
trd_1560	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
trd_1567	PWY-6823	molybdenum cofactor biosynthesis
trd_1567	PWY-6891	thiazole biosynthesis II (Bacillus)
trd_1567	PWY-6892	thiazole biosynthesis I (E. coli)
trd_1567	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
trd_1579	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
trd_1579	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
trd_1602	PWY-5659	GDP-mannose biosynthesis
trd_1602	PWY-6073	alginate biosynthesis I (algal)
trd_1602	PWY-6082	alginate biosynthesis II (bacterial)
trd_1602	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
trd_1610	PWY-5057	L-valine degradation II
trd_1610	PWY-5076	L-leucine degradation III
trd_1610	PWY-5078	L-isoleucine degradation II
trd_1610	PWY-5101	L-isoleucine biosynthesis II
trd_1610	PWY-5103	L-isoleucine biosynthesis III
trd_1610	PWY-5104	L-isoleucine biosynthesis IV
trd_1610	PWY-5108	L-isoleucine biosynthesis V
trd_1615	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
trd_1621	PWY-5367	petroselinate biosynthesis
trd_1621	PWY-5971	palmitate biosynthesis II (bacteria and plants)
trd_1621	PWY-5973	<i>cis</i>-vaccenate biosynthesis
trd_1621	PWY-5989	stearate biosynthesis II (bacteria and plants)
trd_1621	PWY-5994	palmitate biosynthesis I (animals and fungi)
trd_1621	PWY-6113	superpathway of mycolate biosynthesis
trd_1621	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
trd_1621	PWY-6519	8-amino-7-oxononanoate biosynthesis I
trd_1621	PWY-6951	trd_1621
trd_1621	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
trd_1621	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
trd_1621	PWYG-321	mycolate biosynthesis
trd_1622	PWY-4381	fatty acid biosynthesis initiation I
trd_1622	PWY-6799	fatty acid biosynthesis (plant mitochondria)
trd_1622	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
trd_1623	PWY-4381	fatty acid biosynthesis initiation I
trd_1627	PWY-5057	L-valine degradation II
trd_1627	PWY-5076	L-leucine degradation III
trd_1627	PWY-5078	L-isoleucine degradation II
trd_1627	PWY-5101	L-isoleucine biosynthesis II
trd_1627	PWY-5103	L-isoleucine biosynthesis III
trd_1627	PWY-5104	L-isoleucine biosynthesis IV
trd_1627	PWY-5108	L-isoleucine biosynthesis V
trd_1634	PWY-6823	molybdenum cofactor biosynthesis
trd_1634	PWY-6891	thiazole biosynthesis II (Bacillus)
trd_1634	PWY-6892	thiazole biosynthesis I (E. coli)
trd_1634	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
trd_1655	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
trd_1655	PWY-2201	folate transformations I
trd_1655	PWY-3841	folate transformations II
trd_1655	PWY-5030	L-histidine degradation III
trd_1655	PWY-5497	purine nucleobases degradation II (anaerobic)
trd_1655	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
trd_1662	PWY-7560	methylerythritol phosphate pathway II
trd_1679	PWY-6700	queuosine biosynthesis
trd_1690	PWY-6871	3-methylbutanol biosynthesis
trd_1693	PWY-7396	butanol and isobutanol biosynthesis (engineered)
trd_1696	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
trd_1696	PWY-6416	quinate degradation II
trd_1696	PWY-6707	gallate biosynthesis
trd_1708	PWY-6823	molybdenum cofactor biosynthesis
trd_1709	PWY-6823	molybdenum cofactor biosynthesis
trd_1714	PWY-2941	L-lysine biosynthesis II
trd_1714	PWY-2942	L-lysine biosynthesis III
trd_1714	PWY-5097	L-lysine biosynthesis VI
trd_1717	PWY-7533	gliotoxin biosynthesis
trd_1723	PWY-7560	methylerythritol phosphate pathway II
trd_1724	PWY-7560	methylerythritol phosphate pathway II
trd_1728	PWY-1042	glycolysis IV (plant cytosol)
trd_1728	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
trd_1728	PWY-5484	glycolysis II (from fructose 6-phosphate)
trd_1728	PWY-5723	Rubisco shunt
trd_1728	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
trd_1728	PWY-6886	1-butanol autotrophic biosynthesis
trd_1728	PWY-6901	superpathway of glucose and xylose degradation
trd_1728	PWY-7003	glycerol degradation to butanol
trd_1728	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
trd_1728	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
trd_1742	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
trd_1747	PWY-3821	galactose degradation III
trd_1747	PWY-6317	galactose degradation I (Leloir pathway)
trd_1747	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
trd_1747	PWY-6527	stachyose degradation
trd_1747	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
trd_1747	PWY-7344	UDP-D-galactose biosynthesis
trd_1749	PWY-5350	thiosulfate disproportionation III (rhodanese)
trd_1756	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
trd_1758	PWY-3121	linamarin degradation
trd_1758	PWY-5176	coumarin biosynthesis (via 2-coumarate)
trd_1758	PWY-6002	lotaustralin degradation
trd_1758	PWY-6788	cellulose degradation II (fungi)
trd_1758	PWY-7089	taxiphyllin bioactivation
trd_1758	PWY-7091	linustatin bioactivation
trd_1758	PWY-7092	neolinustatin bioactivation
trd_1770	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
trd_1770	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
trd_1770	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
trd_1770	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
trd_1770	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
trd_1770	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
trd_1770	PWY-7205	CMP phosphorylation
trd_1770	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
trd_1770	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
trd_1770	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
trd_1770	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
trd_1770	PWY-7224	purine deoxyribonucleosides salvage
trd_1770	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
trd_1770	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
trd_1778	PWY-622	starch biosynthesis
trd_1788	PWY-3781	aerobic respiration I (cytochrome c)
trd_1788	PWY-4302	aerobic respiration III (alternative oxidase pathway)
trd_1788	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
trd_1788	PWY-6692	Fe(II) oxidation
trd_1798	PWY-6703	preQ<sub>0</sub> biosynthesis
trd_1803	PWY-5392	reductive TCA cycle II
trd_1803	PWY-5537	pyruvate fermentation to acetate V
trd_1803	PWY-5538	pyruvate fermentation to acetate VI
trd_1803	PWY-5690	TCA cycle II (plants and fungi)
trd_1803	PWY-5913	TCA cycle VI (obligate autotrophs)
trd_1803	PWY-6728	methylaspartate cycle
trd_1803	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
trd_1803	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
trd_1804	PWY-5392	reductive TCA cycle II
trd_1804	PWY-5537	pyruvate fermentation to acetate V
trd_1804	PWY-5538	pyruvate fermentation to acetate VI
trd_1804	PWY-5690	TCA cycle II (plants and fungi)
trd_1804	PWY-5913	TCA cycle VI (obligate autotrophs)
trd_1804	PWY-6728	methylaspartate cycle
trd_1804	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
trd_1804	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
trd_1815	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
trd_1815	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
trd_1815	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
trd_1815	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
trd_1815	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
trd_1815	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
trd_1815	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
trd_1815	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
trd_1850	PWY-5386	methylglyoxal degradation I
trd_1889	PWY-7158	L-phenylalanine degradation V
trd_1890	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
trd_1915	PWY-5386	methylglyoxal degradation I
trd_1931	PWY-2622	trehalose biosynthesis IV
trd_1932	PWY-5941	glycogen degradation II (eukaryotic)
trd_1932	PWY-6724	starch degradation II
trd_1932	PWY-6737	starch degradation V
trd_1932	PWY-7238	sucrose biosynthesis II
trd_1933	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
trd_1933	PWY-622	starch biosynthesis
