trd_A0002	SSF53720	ALDH-like
trd_A0006	SSF103473	MFS general substrate transporter
trd_A0007	SSF50475	FMN-binding split barrel
trd_A0008	SSF54197	HIT-like
trd_A0009	SSF52499	Isochorismatase-like hydrolases
trd_A0011	SSF56601	beta-lactamase/transpeptidase-like
trd_A0012	SSF51735	NAD(P)-binding Rossmann-fold domains
trd_A0014	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
trd_A0014	SSF51735	NAD(P)-binding Rossmann-fold domains
trd_A0015	SSF55469	FMN-dependent nitroreductase-like
trd_A0017	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0017	SSF54211	Ribosomal protein S5 domain 2-like
trd_A0018	SSF81301	Nucleotidyltransferase
trd_A0019	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
trd_A0020	SSF49764	HSP20-like chaperones
trd_A0024	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0028	SSF101801	Surface presentation of antigens (SPOA)
trd_A0029	SSF101801	Surface presentation of antigens (SPOA)
trd_A0029	SSF103039	CheC-like
trd_A0031	SSF103088	OmpA-like
trd_A0037	SSF160544	EscU C-terminal domain-like
trd_A0039	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0041	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
trd_A0041	SSF88946	Sigma2 domain of RNA polymerase sigma factors
trd_A0044	SSF117143	Flagellar hook protein flgE
trd_A0045	SSF117143	Flagellar hook protein flgE
trd_A0046	SSF101498	Anti-sigma factor FlgM
trd_A0048	SSF64518	Phase 1 flagellin
trd_A0049	SSF64518	Phase 1 flagellin
trd_A0050	SSF141457	BH3618-like
trd_A0051	SSF117130	CsrA-like
trd_A0053	SSF109854	DinB/YfiT-like putative metalloenzymes
trd_A0053	SSF143100	TTHA1013/TTHA0281-like
trd_A0054	SSF55811	Nudix
trd_A0055	SSF54427	NTF2-like
trd_A0056	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
trd_A0057	SSF50692	ADC-like
trd_A0057	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
trd_A0058	SSF54862	4Fe-4S ferredoxins
trd_A0061	SSF144020	FdhE-like
trd_A0068	SSF47741	CO dehydrogenase ISP C-domain like
trd_A0068	SSF54292	2Fe-2S ferredoxin-like
trd_A0069	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
trd_A0069	SSF56003	Molybdenum cofactor-binding domain
trd_A0070	SSF52009	Phosphohistidine domain
trd_A0071	SSF54909	Dimeric alpha+beta barrel
trd_A0072	SSF56529	FAH
trd_A0073	SSF55447	CO dehydrogenase flavoprotein C-terminal domain-like
trd_A0073	SSF56176	FAD-binding/transporter-associated domain-like
trd_A0074	SSF109604	HD-domain/PDEase-like
trd_A0075	SSF56059	Glutathione synthetase ATP-binding domain-like
trd_A0076	SSF102198	Putative cyclase
trd_A0077	SSF46785	"Winged helix" DNA-binding domain
trd_A0077	SSF48008	GntR ligand-binding domain-like
trd_A0078	SSF51621	Phosphoenolpyruvate/pyruvate domain
trd_A0080	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0081	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0082	SSF53822	Periplasmic binding protein-like I
trd_A0086	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
trd_A0087	SSF51735	NAD(P)-binding Rossmann-fold domains
trd_A0089	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0091	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0092	SSF103473	MFS general substrate transporter
trd_A0094	SSF159888	YdhG-like
trd_A0097	SSF56801	Acetyl-CoA synthetase-like
trd_A0098	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
trd_A0098	SSF51735	NAD(P)-binding Rossmann-fold domains
trd_A0098	SSF52096	ClpP/crotonase
trd_A0099	SSF52096	ClpP/crotonase
trd_A0100	SSF88713	Glycoside hydrolase/deacetylase
trd_A0103	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0109	SSF53383	PLP-dependent transferases
trd_A0112	SSF158568	AF1862-like
trd_A0117	SSF50494	Trypsin-like serine proteases
trd_A0118	SSF90257	Myosin rod fragments
trd_A0121	SSF53187	Zn-dependent exopeptidases
trd_A0123	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0130	SSF47240	Ferritin-like
trd_A0131	SSF47240	Ferritin-like
trd_A0132	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
trd_A0132	SSF88946	Sigma2 domain of RNA polymerase sigma factors
trd_A0136	SSF88713	Glycoside hydrolase/deacetylase
trd_A0137	SSF53448	Nucleotide-diphospho-sugar transferases
trd_A0138	SSF53448	Nucleotide-diphospho-sugar transferases
trd_A0141	SSF52833	Thioredoxin-like
trd_A0143	SSF48371	ARM repeat
trd_A0151	SSF50249	Nucleic acid-binding proteins
trd_A0151	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0152	SSF109854	DinB/YfiT-like putative metalloenzymes
trd_A0153	SSF46785	"Winged helix" DNA-binding domain
trd_A0153	SSF48008	GntR ligand-binding domain-like
trd_A0155	SSF52172	CheY-like
trd_A0156	SSF50621	Alanine racemase C-terminal domain-like
trd_A0156	SSF51419	PLP-binding barrel
trd_A0158	SSF52467	DHS-like NAD/FAD-binding domain
trd_A0158	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
trd_A0162	SSF54506	Diaminopimelate epimerase-like
trd_A0165	SSF52440	PreATP-grasp domain
trd_A0165	SSF56059	Glutathione synthetase ATP-binding domain-like
trd_A0169	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
trd_A0171	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0172	SSF46785	"Winged helix" DNA-binding domain
trd_A0175	SSF48256	Citrate synthase
trd_A0176	SSF103378	2-methylcitrate dehydratase PrpD
trd_A0177	SSF51621	Phosphoenolpyruvate/pyruvate domain
trd_A0181	SSF50346	PRC-barrel domain
trd_A0182	SSF46785	"Winged helix" DNA-binding domain
trd_A0183	SSF53807	"Helical backbone" metal receptor
trd_A0184	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0185	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
trd_A0187	SSF75169	DsrEFH-like
trd_A0190	SSF160387	NosL/MerB-like
trd_A0192	SSF51126	Pectin lyase-like
trd_A0192	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0194	SSF49503	Cupredoxins
trd_A0194	SSF50974	Nitrous oxide reductase, N-terminal domain
trd_A0197	SSF52141	Uracil-DNA glycosylase-like
trd_A0200	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
trd_A0201	SSF160240	Cation efflux protein cytoplasmic domain-like
trd_A0201	SSF161111	Cation efflux protein transmembrane domain-like
trd_A0202	SSF100950	NagB/RpiA/CoA transferase-like
trd_A0202	SSF46548	alpha-helical ferredoxin
trd_A0207	SSF141371	PilZ domain-like
trd_A0208	SSF64518	Phase 1 flagellin
trd_A0210	SSF52738	Methylesterase CheB, C-terminal domain
trd_A0210	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
trd_A0211	SSF52172	CheY-like
trd_A0212	SSF103039	CheC-like
trd_A0214	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
trd_A0215	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
trd_A0215	SSF47384	Homodimeric domain of signal transducing histidine kinase
trd_A0215	SSF50341	CheW-like
trd_A0215	SSF52172	CheY-like
trd_A0215	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
trd_A0217	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
trd_A0219	SSF160214	FlaG-like
trd_A0221	SSF101116	Flagellar export chaperone FliS
trd_A0222	SSF140566	FlgN-like
trd_A0223	SSF63817	Sortase
trd_A0228	SSF49503	Cupredoxins
trd_A0229	SSF51735	NAD(P)-binding Rossmann-fold domains
trd_A0230	SSF51735	NAD(P)-binding Rossmann-fold domains
trd_A0233	SSF47413	lambda repressor-like DNA-binding domains
trd_A0233	SSF53850	Periplasmic binding protein-like II
trd_A0234	SSF53850	Periplasmic binding protein-like II
trd_A0235	SSF161098	MetI-like
trd_A0237	SSF52980	Restriction endonuclease-like
trd_A0238	SSF52402	Adenine nucleotide alpha hydrolases-like
trd_A0241	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
trd_A0242	SSF56300	Metallo-dependent phosphatases
trd_A0243	SSF81301	Nucleotidyltransferase
trd_A0245	SSF50475	FMN-binding split barrel
trd_A0246	SSF51182	RmlC-like cupins
trd_A0248	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
trd_A0248	SSF56645	Acyl-CoA dehydrogenase NM domain-like
trd_A0249	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0250	SSF53850	Periplasmic binding protein-like II
trd_A0251	SSF161098	MetI-like
trd_A0252	SSF102198	Putative cyclase
trd_A0253	SSF53271	PRTase-like
trd_A0255	SSF53244	MurD-like peptide ligases, peptide-binding domain
trd_A0255	SSF53623	MurD-like peptide ligases, catalytic domain
trd_A0258	SSF53474	alpha/beta-Hydrolases
trd_A0259	SSF53474	alpha/beta-Hydrolases
trd_A0260	SSF50998	Quinoprotein alcohol dehydrogenase-like
trd_A0261	SSF52467	DHS-like NAD/FAD-binding domain
trd_A0261	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
trd_A0262	SSF56322	ADC synthase
trd_A0263	SSF46689	Homeodomain-like
trd_A0263	SSF48498	Tetracyclin repressor-like, C-terminal domain
trd_A0265	SSF51695	PLC-like phosphodiesterases
trd_A0266	SSF161098	MetI-like
trd_A0267	SSF161098	MetI-like
trd_A0268	SSF53850	Periplasmic binding protein-like II
trd_A0271	SSF55811	Nudix
trd_A0274	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0275	SSF69796	Thymidylate synthase-complementing protein Thy1
trd_A0280	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
trd_A0281	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0281	SSF56024	Phospholipase D/nuclease
trd_A0288	SSF52980	Restriction endonuclease-like
trd_A0289	SSF52980	Restriction endonuclease-like
trd_A0292	SSF50156	PDZ domain-like
trd_A0292	SSF50494	Trypsin-like serine proteases
trd_A0294	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
trd_A0295	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
trd_A0302	SSF160240	Cation efflux protein cytoplasmic domain-like
trd_A0302	SSF161111	Cation efflux protein transmembrane domain-like
trd_A0304	SSF52096	ClpP/crotonase
trd_A0306	SSF51604	Enolase C-terminal domain-like
trd_A0306	SSF54826	Enolase N-terminal domain-like
trd_A0308	SSF56801	Acetyl-CoA synthetase-like
trd_A0309	SSF51735	NAD(P)-binding Rossmann-fold domains
trd_A0309	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
trd_A0310	SSF56784	HAD-like
trd_A0310	SSF81653	Calcium ATPase, transduction domain A
trd_A0310	SSF81660	Metal cation-transporting ATPase, ATP-binding domain N
trd_A0310	SSF81665	Calcium ATPase, transmembrane domain M
trd_A0311	SSF52402	Adenine nucleotide alpha hydrolases-like
trd_A0311	SSF54631	CBS-domain pair
trd_A0314	SSF103473	MFS general substrate transporter
trd_A0315	SSF50156	PDZ domain-like
trd_A0315	SSF50494	Trypsin-like serine proteases
trd_A0317	SSF56601	beta-lactamase/transpeptidase-like
trd_A0319	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
trd_A0320	SSF50156	PDZ domain-like
trd_A0320	SSF50494	Trypsin-like serine proteases
trd_A0321	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
trd_A0321	SSF88946	Sigma2 domain of RNA polymerase sigma factors
trd_A0323	SSF53850	Periplasmic binding protein-like II
trd_A0324	SSF161098	MetI-like
trd_A0325	SSF161098	MetI-like
trd_A0326	SSF51905	FAD/NAD(P)-binding domain
trd_A0327	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
trd_A0328	SSF52467	DHS-like NAD/FAD-binding domain
trd_A0328	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
trd_A0329	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0330	SSF56801	Acetyl-CoA synthetase-like
trd_A0331	SSF53850	Periplasmic binding protein-like II
trd_A0332	SSF161098	MetI-like
trd_A0333	SSF52096	ClpP/crotonase
trd_A0334	SSF52096	ClpP/crotonase
trd_A0335	SSF51338	Composite domain of metallo-dependent hydrolases
trd_A0335	SSF51556	Metallo-dependent hydrolases
trd_A0336	SSF160519	BB2672-like
trd_A0337	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
trd_A0337	SSF56003	Molybdenum cofactor-binding domain
trd_A0338	SSF51735	NAD(P)-binding Rossmann-fold domains
trd_A0340	SSF54427	NTF2-like
trd_A0341	SSF50022	ISP domain
trd_A0341	SSF55961	Bet v1-like
trd_A0342	SSF51569	Aldolase
trd_A0343	SSF46785	"Winged helix" DNA-binding domain
trd_A0343	SSF48008	GntR ligand-binding domain-like
trd_A0344	SSF51905	FAD/NAD(P)-binding domain
trd_A0347	SSF116726	TrkA C-terminal domain-like
trd_A0347	SSF51735	NAD(P)-binding Rossmann-fold domains
trd_A0348	SSF56529	FAH
trd_A0349	SSF109604	HD-domain/PDEase-like
trd_A0350	SSF54631	CBS-domain pair
trd_A0350	SSF56176	FAD-binding/transporter-associated domain-like
trd_A0351	SSF54427	NTF2-like
trd_A0352	SSF52972	ITPase-like
trd_A0355	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0356	SSF51905	FAD/NAD(P)-binding domain
trd_A0356	SSF54373	FAD-linked reductases, C-terminal domain
trd_A0358	SSF53067	Actin-like ATPase domain
trd_A0360	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
trd_A0362	SSF53383	PLP-dependent transferases
trd_A0363	SSF103473	MFS general substrate transporter
trd_A0364	SSF103473	MFS general substrate transporter
trd_A0365	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
trd_A0366	SSF52374	Nucleotidylyl transferase
trd_A0367	SSF51182	RmlC-like cupins
trd_A0376	SSF102405	MCP/YpsA-like
trd_A0377	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
trd_A0378	SSF54862	4Fe-4S ferredoxins
trd_A0380	SSF51905	FAD/NAD(P)-binding domain
trd_A0380	SSF55008	HMA, heavy metal-associated domain
trd_A0380	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
trd_A0383	SSF52833	Thioredoxin-like
trd_A0384	SSF53271	PRTase-like
trd_A0386	SSF50129	GroES-like
trd_A0386	SSF51735	NAD(P)-binding Rossmann-fold domains
trd_A0388	SSF109854	DinB/YfiT-like putative metalloenzymes
trd_A0389	SSF49503	Cupredoxins
trd_A0390	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0393	SSF49503	Cupredoxins
trd_A0394	SSF81442	Cytochrome c oxidase subunit I-like
trd_A0396	SSF55909	Pentein
trd_A0397	SSF89550	PHP domain-like
trd_A0398	SSF57997	Tropomyosin
trd_A0400	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
trd_A0400	SSF56003	Molybdenum cofactor-binding domain
trd_A0402	SSF53613	Ribokinase-like
trd_A0404	SSF109998	Triger factor/SurA peptide-binding domain-like
trd_A0406	SSF54285	MoaD/ThiS
trd_A0407	SSF51338	Composite domain of metallo-dependent hydrolases
trd_A0407	SSF51556	Metallo-dependent hydrolases
trd_A0408	SSF51283	dUTPase-like
trd_A0409	SSF53041	Resolvase-like
trd_A0412	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0412	SSF54211	Ribosomal protein S5 domain 2-like
trd_A0414	SSF53633	Carbamate kinase-like
trd_A0414	SSF55021	ACT-like
trd_A0415	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
trd_A0415	SSF88946	Sigma2 domain of RNA polymerase sigma factors
trd_A0420	SSF52833	Thioredoxin-like
trd_A0421	SSF143437	THUMP domain-like
trd_A0421	SSF52402	Adenine nucleotide alpha hydrolases-like
trd_A0425	SSF117892	Band 7/SPFH domain
trd_A0429	SSF51735	NAD(P)-binding Rossmann-fold domains
trd_A0430	SSF54368	Glutamine synthetase, N-terminal domain
trd_A0430	SSF55931	Glutamine synthetase/guanido kinase
trd_A0436	SSF55920	Creatinase/aminopeptidase
trd_A0437	SSF103481	Multidrug resistance efflux transporter EmrE
trd_A0439	SSF49503	Cupredoxins
trd_A0441	SSF54427	NTF2-like
trd_A0442	SSF140990	FtsH protease domain-like
trd_A0442	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0444	SSF63829	Calcium-dependent phosphotriesterase
trd_A0446	SSF52151	FabD/lysophospholipase-like
trd_A0446	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
trd_A0447	SSF53901	Thiolase-like
trd_A0448	SSF118116	DNA mismatch repair protein MutL
trd_A0448	SSF54211	Ribosomal protein S5 domain 2-like
trd_A0448	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
trd_A0449	SSF48334	DNA repair protein MutS, domain III
trd_A0449	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0449	SSF53150	DNA repair protein MutS, domain II
trd_A0449	SSF55271	DNA repair protein MutS, domain I
trd_A0452	SSF53383	PLP-dependent transferases
trd_A0453	SSF49503	Cupredoxins
trd_A0454	SSF81442	Cytochrome c oxidase subunit I-like
trd_A0457	SSF51905	FAD/NAD(P)-binding domain
trd_A0457	SSF54373	FAD-linked reductases, C-terminal domain
trd_A0458	SSF56784	HAD-like
trd_A0459	SSF103481	Multidrug resistance efflux transporter EmrE
trd_A0460	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
trd_A0460	SSF51735	NAD(P)-binding Rossmann-fold domains
trd_A0461	SSF75304	Amidase signature (AS) enzymes
trd_A0463	SSF160980	SSO1389-like
trd_A0465	SSF52980	Restriction endonuclease-like
trd_A0468	SSF161098	MetI-like
trd_A0469	SSF161098	MetI-like
trd_A0470	SSF53850	Periplasmic binding protein-like II
trd_A0471	SSF46785	"Winged helix" DNA-binding domain
trd_A0471	SSF48008	GntR ligand-binding domain-like
trd_A0473	SSF109604	HD-domain/PDEase-like
trd_A0475	SSF56529	FAH
trd_A0479	SSF56784	HAD-like
trd_A0479	SSF81653	Calcium ATPase, transduction domain A
trd_A0479	SSF81660	Metal cation-transporting ATPase, ATP-binding domain N
trd_A0479	SSF81665	Calcium ATPase, transmembrane domain M
trd_A0482	SSF51182	RmlC-like cupins
trd_A0486	SSF51905	FAD/NAD(P)-binding domain
trd_A0486	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
trd_A0488	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
trd_A0488	SSF88946	Sigma2 domain of RNA polymerase sigma factors
trd_A0490	SSF52833	Thioredoxin-like
trd_A0491	SSF50969	YVTN repeat-like/Quinoprotein amine dehydrogenase
trd_A0492	SSF50969	YVTN repeat-like/Quinoprotein amine dehydrogenase
trd_A0494	SSF75011	3-carboxy-cis,cis-mucoante lactonizing enzyme
trd_A0495	SSF50998	Quinoprotein alcohol dehydrogenase-like
trd_A0497	SSF50969	YVTN repeat-like/Quinoprotein amine dehydrogenase
trd_A0502	SSF50998	Quinoprotein alcohol dehydrogenase-like
trd_A0503	SSF48256	Citrate synthase
trd_A0504	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0505	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0506	SSF53300	vWA-like
trd_A0508	SSF55681	Class II aaRS and biotin synthetases
trd_A0511	SSF56317	Carbon-nitrogen hydrolase
trd_A0519	SSF47240	Ferritin-like
trd_A0520	SSF56176	FAD-binding/transporter-associated domain-like
trd_A0521	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
trd_A0522	SSF50346	PRC-barrel domain
trd_A0525	SSF89550	PHP domain-like
trd_A0526	SSF100879	Lesion bypass DNA polymerase (Y-family), little finger domain
trd_A0526	SSF56672	DNA/RNA polymerases
trd_A0527	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0532	SSF50331	MOP-like
trd_A0532	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0533	SSF161098	MetI-like
trd_A0534	SSF53850	Periplasmic binding protein-like II
trd_A0536	SSF46785	"Winged helix" DNA-binding domain
trd_A0536	SSF55781	GAF domain-like
trd_A0537	SSF117916	Fe-S cluster assembly (FSCA) domain-like
trd_A0538	SSF51556	Metallo-dependent hydrolases
trd_A0539	SSF50129	GroES-like
trd_A0539	SSF51735	NAD(P)-binding Rossmann-fold domains
trd_A0542	SSF52499	Isochorismatase-like hydrolases
trd_A0543	SSF51569	Aldolase
trd_A0544	SSF50475	FMN-binding split barrel
trd_A0545	SSF52402	Adenine nucleotide alpha hydrolases-like
trd_A0546	SSF141130	Acetamidase/Formamidase-like
trd_A0547	SSF82784	OsmC-like
trd_A0548	SSF144010	CofE-like
trd_A0549	SSF50475	FMN-binding split barrel
trd_A0550	SSF53474	alpha/beta-Hydrolases
trd_A0552	SSF52833	Thioredoxin-like
trd_A0554	SSF51658	Xylose isomerase-like
trd_A0559	SSF54909	Dimeric alpha+beta barrel
trd_A0561	SSF63411	LuxS/MPP-like metallohydrolase
trd_A0562	SSF52016	LeuD/IlvD-like
trd_A0562	SSF53732	Aconitase iron-sulfur domain
trd_A0563	SSF47240	Ferritin-like
trd_A0564	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
trd_A0564	SSF56003	Molybdenum cofactor-binding domain
trd_A0565	SSF47741	CO dehydrogenase ISP C-domain like
trd_A0565	SSF54292	2Fe-2S ferredoxin-like
trd_A0566	SSF55447	CO dehydrogenase flavoprotein C-terminal domain-like
trd_A0566	SSF56176	FAD-binding/transporter-associated domain-like
trd_A0567	SSF53474	alpha/beta-Hydrolases
trd_A0567	SSF82171	DPP6 N-terminal domain-like
trd_A0568	SSF53448	Nucleotide-diphospho-sugar transferases
trd_A0569	SSF46894	C-terminal effector domain of the bipartite response regulators
trd_A0569	SSF52172	CheY-like
trd_A0570	SSF55781	GAF domain-like
trd_A0570	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
trd_A0572	SSF51556	Metallo-dependent hydrolases
trd_A0573	SSF53092	Creatinase/prolidase N-terminal domain
trd_A0573	SSF55920	Creatinase/aminopeptidase
trd_A0574	SSF55073	Nucleotide cyclase
trd_A0574	SSF55781	GAF domain-like
trd_A0574	SSF55785	PYP-like sensor domain (PAS domain)
trd_A0575	SSF103473	MFS general substrate transporter
trd_A0580	SSF82549	DAK1/DegV-like
trd_A0582	SSF101473	DhaL-like
trd_A0590	SSF56281	Metallo-hydrolase/oxidoreductase
trd_A0591	SSF51604	Enolase C-terminal domain-like
trd_A0591	SSF54826	Enolase N-terminal domain-like
trd_A0592	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0593	SSF53822	Periplasmic binding protein-like I
trd_A0594	SSF46785	"Winged helix" DNA-binding domain
trd_A0594	SSF55781	GAF domain-like
trd_A0597	SSF109604	HD-domain/PDEase-like
trd_A0598	SSF51730	FAD-linked oxidoreductase
trd_A0604	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0605	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
trd_A0605	SSF88946	Sigma2 domain of RNA polymerase sigma factors
trd_A0606	SSF50156	PDZ domain-like
trd_A0606	SSF50494	Trypsin-like serine proteases
trd_A0607	SSF158472	HAMP domain-like
trd_A0607	SSF47384	Homodimeric domain of signal transducing histidine kinase
trd_A0607	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
trd_A0608	SSF46894	C-terminal effector domain of the bipartite response regulators
trd_A0608	SSF52172	CheY-like
trd_A0609	SSF101874	YceI-like
trd_A0610	SSF53474	alpha/beta-Hydrolases
trd_A0611	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
trd_A0611	SSF88946	Sigma2 domain of RNA polymerase sigma factors
trd_A0613	SSF144052	Thermophilic metalloprotease-like
trd_A0615	SSF51126	Pectin lyase-like
trd_A0620	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
trd_A0621	SSF103473	MFS general substrate transporter
trd_A0622	SSF51395	FMN-linked oxidoreductases
trd_A0624	SSF56784	HAD-like
trd_A0625	SSF103365	Hypothetical protein PH1602
trd_A0626	SSF69819	MTH1598-like
trd_A0628	SSF50692	ADC-like
trd_A0628	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
trd_A0629	SSF54862	4Fe-4S ferredoxins
trd_A0634	SSF53822	Periplasmic binding protein-like I
trd_A0637	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0638	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0639	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
trd_A0639	SSF51735	NAD(P)-binding Rossmann-fold domains
trd_A0640	SSF63817	Sortase
trd_A0641	SSF51126	Pectin lyase-like
trd_A0642	SSF117143	Flagellar hook protein flgE
trd_A0646	SSF51261	Duplicated hybrid motif
trd_A0646	SSF53955	Lysozyme-like
trd_A0648	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0650	SSF48029	FliG
trd_A0657	SSF53187	Zn-dependent exopeptidases
trd_A0657	SSF55031	Bacterial exopeptidase dimerisation domain
trd_A0658	SSF50952	Soluble quinoprotein glucose dehydrogenase
trd_A0659	SSF103481	Multidrug resistance efflux transporter EmrE
trd_A0660	SSF54285	MoaD/ThiS
trd_A0661	SSF48310	Aldehyde ferredoxin oxidoreductase, C-terminal domains
trd_A0661	SSF56228	Aldehyde ferredoxin oxidoreductase, N-terminal domain
trd_A0663	SSF55298	YjgF-like
trd_A0665	SSF54368	Glutamine synthetase, N-terminal domain
trd_A0665	SSF55931	Glutamine synthetase/guanido kinase
trd_A0666	SSF48208	Six-hairpin glycosidases
trd_A0669	SSF51556	Metallo-dependent hydrolases
trd_A0671	SSF48371	ARM repeat
trd_A0672	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0675	SSF53383	PLP-dependent transferases
trd_A0676	SSF51679	Bacterial luciferase-like
trd_A0679	SSF51126	Pectin lyase-like
trd_A0681	SSF52467	DHS-like NAD/FAD-binding domain
trd_A0682	SSF51905	FAD/NAD(P)-binding domain
trd_A0682	SSF54373	FAD-linked reductases, C-terminal domain
trd_A0690	SSF46894	C-terminal effector domain of the bipartite response regulators
trd_A0691	SSF103473	MFS general substrate transporter
trd_A0692	SSF52743	Subtilisin-like
trd_A0693	SSF53271	PRTase-like
trd_A0696	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0699	SSF53850	Periplasmic binding protein-like II
trd_A0700	SSF161098	MetI-like
trd_A0701	SSF161098	MetI-like
trd_A0702	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
trd_A0704	SSF53850	Periplasmic binding protein-like II
trd_A0705	SSF51735	NAD(P)-binding Rossmann-fold domains
trd_A0705	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
trd_A0706	SSF53697	SIS domain
trd_A0707	SSF51338	Composite domain of metallo-dependent hydrolases
trd_A0707	SSF51556	Metallo-dependent hydrolases
trd_A0708	SSF56601	beta-lactamase/transpeptidase-like
trd_A0709	SSF53067	Actin-like ATPase domain
trd_A0711	SSF51445	(Trans)glycosidases
trd_A0712	SSF53067	Actin-like ATPase domain
trd_A0713	SSF53697	SIS domain
trd_A0715	SSF51604	Enolase C-terminal domain-like
trd_A0715	SSF54826	Enolase N-terminal domain-like
trd_A0719	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0721	SSF89447	AbrB/MazE/MraZ-like
trd_A0728	SSF51261	Duplicated hybrid motif
trd_A0729	SSF103473	MFS general substrate transporter
trd_A0730	SSF50199	Staphylococcal nuclease
trd_A0732	SSF51735	NAD(P)-binding Rossmann-fold domains
trd_A0735	SSF109604	HD-domain/PDEase-like
trd_A0736	SSF53474	alpha/beta-Hydrolases
trd_A0737	SSF109604	HD-domain/PDEase-like
trd_A0737	SSF141868	EAL domain-like
trd_A0738	SSF50475	FMN-binding split barrel
trd_A0739	SSF52833	Thioredoxin-like
trd_A0740	SSF51905	FAD/NAD(P)-binding domain
trd_A0740	SSF54373	FAD-linked reductases, C-terminal domain
trd_A0743	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
trd_A0745	SSF53649	Alkaline phosphatase-like
trd_A0748	SSF52768	Arginase/deacetylase
trd_A0750	SSF46785	"Winged helix" DNA-binding domain
trd_A0750	SSF54909	Dimeric alpha+beta barrel
trd_A0751	SSF63817	Sortase
trd_A0752	SSF53383	PLP-dependent transferases
trd_A0754	SSF50129	GroES-like
trd_A0754	SSF51735	NAD(P)-binding Rossmann-fold domains
trd_A0764	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0765	SSF109709	KorB DNA-binding domain-like
trd_A0765	SSF110849	ParB/Sulfiredoxin
trd_A0768	SSF88713	Glycoside hydrolase/deacetylase
trd_A0769	SSF50891	Cyclophilin-like
trd_A0770	SSF160467	PH0987 N-terminal domain-like
trd_A0770	SSF50891	Cyclophilin-like
trd_A0771	SSF51230	Single hybrid motif
trd_A0773	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0774	SSF53822	Periplasmic binding protein-like I
trd_A0775	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
trd_A0775	SSF56003	Molybdenum cofactor-binding domain
trd_A0776	SSF47741	CO dehydrogenase ISP C-domain like
trd_A0776	SSF54292	2Fe-2S ferredoxin-like
trd_A0777	SSF55447	CO dehydrogenase flavoprotein C-terminal domain-like
trd_A0777	SSF56176	FAD-binding/transporter-associated domain-like
trd_A0778	SSF51246	Rudiment single hybrid motif
trd_A0778	SSF52440	PreATP-grasp domain
trd_A0778	SSF56059	Glutathione synthetase ATP-binding domain-like
trd_A0779	SSF56059	Glutathione synthetase ATP-binding domain-like
trd_A0780	SSF52009	Phosphohistidine domain
trd_A0781	SSF54909	Dimeric alpha+beta barrel
trd_A0782	SSF63817	Sortase
trd_A0783	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
trd_A0783	SSF51735	NAD(P)-binding Rossmann-fold domains
trd_A0784	SSF51621	Phosphoenolpyruvate/pyruvate domain
trd_A0785	SSF52374	Nucleotidylyl transferase
trd_A0786	SSF56112	Protein kinase-like (PK-like)
trd_A0788	SSF56801	Acetyl-CoA synthetase-like
trd_A0791	SSF52467	DHS-like NAD/FAD-binding domain
trd_A0791	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
trd_A0792	SSF101790	Aminomethyltransferase beta-barrel domain
trd_A0792	SSF103025	Folate-binding domain
trd_A0793	SSF53822	Periplasmic binding protein-like I
trd_A0796	SSF56300	Metallo-dependent phosphatases
trd_A0797	SSF52788	Phosphotyrosine protein phosphatases I
trd_A0798	SSF56317	Carbon-nitrogen hydrolase
trd_A0799	SSF81301	Nucleotidyltransferase
trd_A0800	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
trd_A0801	SSF142338	CofD-like
trd_A0802	SSF53448	Nucleotide-diphospho-sugar transferases
trd_A0803	SSF103481	Multidrug resistance efflux transporter EmrE
trd_A0804	SSF55469	FMN-dependent nitroreductase-like
trd_A0805	SSF50199	Staphylococcal nuclease
trd_A0806	SSF52467	DHS-like NAD/FAD-binding domain
trd_A0806	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
trd_A0808	SSF88697	PUA domain-like
trd_A0809	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0809	SSF55729	Acyl-CoA N-acyltransferases (Nat)
trd_A0810	SSF103473	MFS general substrate transporter
trd_A0811	SSF102114	Radical SAM enzymes
trd_A0812	SSF53383	PLP-dependent transferases
trd_A0814	SSF52266	SGNH hydrolase
trd_A0815	SSF54197	HIT-like
trd_A0815	SSF55811	Nudix
trd_A0816	SSF51735	NAD(P)-binding Rossmann-fold domains
trd_A0819	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
trd_A0821	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0822	SSF160246	EspE N-terminal domain-like
trd_A0822	SSF46785	"Winged helix" DNA-binding domain
trd_A0826	SSF52096	ClpP/crotonase
trd_A0827	SSF51735	NAD(P)-binding Rossmann-fold domains
trd_A0827	SSF53383	PLP-dependent transferases
trd_A0828	SSF56801	Acetyl-CoA synthetase-like
trd_A0829	SSF103473	MFS general substrate transporter
trd_A0831	SSF46785	"Winged helix" DNA-binding domain
trd_A0832	SSF57802	Rubredoxin-like
trd_A0833	SSF103247	TT1751-like
trd_A0834	SSF52821	Rhodanese/Cell cycle control phosphatase
trd_A0834	SSF56281	Metallo-hydrolase/oxidoreductase
trd_A0835	SSF52821	Rhodanese/Cell cycle control phosphatase
trd_A0836	SSF51905	FAD/NAD(P)-binding domain
trd_A0836	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
trd_A0838	SSF50022	ISP domain
trd_A0839	SSF53448	Nucleotide-diphospho-sugar transferases
trd_A0840	SSF102114	Radical SAM enzymes
trd_A0843	SSF50129	GroES-like
trd_A0843	SSF51735	NAD(P)-binding Rossmann-fold domains
trd_A0844	SSF51395	FMN-linked oxidoreductases
trd_A0847	SSF50129	GroES-like
trd_A0847	SSF51735	NAD(P)-binding Rossmann-fold domains
trd_A0849	SSF53927	Cytidine deaminase-like
trd_A0851	SSF75304	Amidase signature (AS) enzymes
trd_A0852	SSF51283	dUTPase-like
trd_A0853	SSF53613	Ribokinase-like
trd_A0854	SSF56784	HAD-like
trd_A0855	SSF50952	Soluble quinoprotein glucose dehydrogenase
trd_A0856	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
trd_A0856	SSF51735	NAD(P)-binding Rossmann-fold domains
trd_A0857	SSF102215	Creatininase
trd_A0859	SSF48208	Six-hairpin glycosidases
trd_A0861	SSF53448	Nucleotide-diphospho-sugar transferases
trd_A0862	SSF82171	DPP6 N-terminal domain-like
trd_A0866	SSF52402	Adenine nucleotide alpha hydrolases-like
trd_A0866	SSF69864	Argininosuccinate synthetase, C-terminal domain
trd_A0868	SSF48150	DNA-glycosylase
trd_A0869	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0871	SSF51735	NAD(P)-binding Rossmann-fold domains
trd_A0871	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
trd_A0874	SSF53300	vWA-like
trd_A0875	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0877	SSF101821	Aminopeptidase/glucanase lid domain
trd_A0877	SSF53187	Zn-dependent exopeptidases
trd_A0878	SSF49373	Invasin/intimin cell-adhesion fragments
trd_A0878	SSF50969	YVTN repeat-like/Quinoprotein amine dehydrogenase
trd_A0879	SSF51726	UROD/MetE-like
trd_A0881	SSF56349	DNA breaking-rejoining enzymes
trd_A0882	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
trd_A0883	SSF52172	CheY-like
trd_A0886	SSF55008	HMA, heavy metal-associated domain
trd_A0888	SSF140990	FtsH protease domain-like
trd_A0888	SSF52540	P-loop containing nucleoside triphosphate hydrolases
trd_A0889	SSF53474	alpha/beta-Hydrolases
trd_A0892	SSF51905	FAD/NAD(P)-binding domain
trd_A0895	SSF53383	PLP-dependent transferases
trd_A0897	SSF103473	MFS general substrate transporter
trd_A0898	SSF88713	Glycoside hydrolase/deacetylase
trd_A0899	SSF102114	Radical SAM enzymes
trd_A0900	SSF102114	Radical SAM enzymes
trd_A0904	SSF63992	Dipeptide transport protein
trd_A0905	SSF103256	Hypothetical protein TM0160
trd_A0906	SSF53822	Periplasmic binding protein-like I
trd_A0908	SSF55486	Metalloproteases ("zincins"), catalytic domain
trd_A0909	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
trd_A0910	SSF49777	PEBP-like
trd_A0912	SSF50475	FMN-binding split barrel
trd_A0914	SSF103481	Multidrug resistance efflux transporter EmrE
trd_A0915	SSF51735	NAD(P)-binding Rossmann-fold domains
trd_A0916	SSF46785	"Winged helix" DNA-binding domain
trd_A0916	SSF48008	GntR ligand-binding domain-like
trd_A0917	SSF51569	Aldolase
trd_A0919	SSF47240	Ferritin-like
trd_A0920	SSF110814	TmoB-like
trd_A0921	SSF50022	ISP domain
trd_A0922	SSF56029	Monooxygenase (hydroxylase) regulatory protein
trd_A0923	SSF47240	Ferritin-like
trd_A0924	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
trd_A0924	SSF54292	2Fe-2S ferredoxin-like
trd_A0924	SSF63380	Riboflavin synthase domain-like
trd_A0926	SSF51735	NAD(P)-binding Rossmann-fold domains
trd_A0927	SSF53474	alpha/beta-Hydrolases
trd_A0928	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
trd_A0928	SSF56645	Acyl-CoA dehydrogenase NM domain-like
trd_A0929	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
trd_A0929	SSF56645	Acyl-CoA dehydrogenase NM domain-like
trd_A0930	SSF53474	alpha/beta-Hydrolases
trd_A0931	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
trd_A0931	SSF56645	Acyl-CoA dehydrogenase NM domain-like
trd_A0932	SSF51735	NAD(P)-binding Rossmann-fold domains
trd_A0933	SSF51182	RmlC-like cupins
trd_A0934	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
trd_A0935	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
trd_A0936	SSF52540	P-loop containing nucleoside triphosphate hydrolases