   trd_A0001 NONE
   trd_A0003    3033 ..    3046 +  -6.7  -3.14931   TACGGGACGCCGTTG               GCGAT CTCG ATCGC                TTCGTCCAAGCTGCG  52 245
        pdxH NONE
   trd_A0008    8663 ..    8695 +  -6.3  -3.18264   AGGCTGCGGCGAACA    GCGT-CCGCGAGCGCG GGAC CG-GC-CGCGGGGCGC     TTCCTCGCTCGACAC  51 47
   trd_A0009    9934 ..    9966 +  -2.6  -4.13767   GGTGGAAGAAGCACC     GCG-CGCACG-CTCGG TCG CCGAAACGAGTGCCGC     TTTTCCGGTGCGAAG  58 352
   trd_A0011   12013 ..   12026 +  -3.7  -3.14564   GGACTTTGGTGAGCT               GGGTG ACTG CTCCC                TTGCTGGCGCAGTAG  45 415
   trd_A0013   12619 ..   12640 +  -2.2  -4.84359   GGGCGATCAGCGAAG           CGCGAGAG GCGAAA CTGTTGCG            TTTTTGTAACACTCC  74 42
   trd_A0020 NONE
   trd_A0021   18832 ..   18859 + -19.8  -3.75024   AGTCCAGCGAGTACA        CGGGCCCCGGGG GCAG CCCAGGGGCCCG         TTCTTCCTGGTCACG 100 45
   trd_A0022 NONE
   trd_A0023   20829 ..   20885 + -11.4  -3.62348   GAGACGGAAGGATGC GTCGACGGGCGAGAGTC-GAAAGGCGT GGGC GCGCTGAGCCGACCCTCGCCCGTCGCC TGTTTCTGTAGGCTT  75 47
   trd_A0024 NONE
   trd_A0025 NONE
   trd_A0026   24506 ..   24534 + -12.4  -4.58283   CTTCGGTCCGAGCGG       GGCGGGCGA-GCG CGTA CGAATCGCCCGCC        TTTTTGCGCCGATTC 100 50
        fliP NONE
        fliQ NONE
        fliR NONE
        flhB   32202 ..   32216 +  -3.5    -3.737   CGGTCCAGAGCGAGA              CGC-CG CCGA CGAGCG               TTTCGTGACGGGTTG  54 3
        flhA NONE
   trd_A0039   35351 ..   35365 +    -7  -3.64703   TGCCTGTCCTAGGAC               GCCCGC ACT GCGCGC               TTTGGGTCGGGCAGG  61 52
   trd_A0040 NONE
   trd_A0041 NONE
   trd_A0042 NONE
   trd_A0043 NONE
   trd_A0044 NONE
   trd_A0045 NONE
   trd_A0046 NONE
   trd_A0047 NONE
        flgK NONE
        flgL NONE
   trd_A0050 NONE
        csrA NONE
   trd_A0052   43346 ..   43368 +  -3.2  -4.32402   GTCCGACATATCGTG           CGACCGGAAG ACC CCTCCGTCCG           TTCTTTTCATTAGCG  66 124
   trd_A0053   44532 ..   44542 +  -2.4  -3.07522   ACCGCGGACGATCGC                 ACGG ATA CCGG                 TCTCTTCGGCGATCT  41 404
   trd_A0056 NONE
   trd_A0057   48669 ..   48704 +   -22  -3.05384   GTGGGGAACGGAGGA    GTCCCCAGGGTGACTC GGCT GAGTCACCCTGGGGAG     TTCCCTGAGGGAGAC 100 40
   trd_A0058 NONE
   trd_A0059 NONE
   trd_A0060 NONE
   trd_A0061 NONE
   trd_A0062   51961 ..   51981 +  -2.5  -3.17194   CACCCGGCCGCGCTC            GCGGC CAGAACCGACC GCCGC            TTCACTTGCGAGGCT  42 59
   trd_A0065 NONE
   trd_A0085 NONE
   trd_A0086   74335 ..   74362 +  -5.4  -2.56596   CGGAGCAGTGCATCG        TGGTGCCGGCCG ACGG TGTCCGGTGCCG         TGCGTTCGTCGGAGG  44 184
   trd_A0087   75398 ..   75411 +  -5.2  -3.08464   CAGGATGGGCGCCGA               CGCG ATTTGC CGCG                TTCGGTCGCTGCTCG  49 245
   trd_A0091   80208 ..   80235 +    -4  -4.12188   GTCCGGAAGGATCTT        GCGGCCGTGCGTC GCA GCCGGACGG-TGC        TTTTGCCGCTCGTGC  61 71
   trd_A0096 NONE
   trd_A0097 NONE
   trd_A0098 NONE
   trd_A0099   88124 ..   88160 + -17.4  -3.59979   GGGAAGGGAAGGGGA   CGCAGGCCGGCTGGG GAGAACGA CCCAGCCGGCCT-CG    TTTGACATACAGGAG  89 56
   trd_A0102 NONE
   trd_A0103   94572 ..   94592 +  -2.4   -3.6682   CGCTTTCGGGAGGGA            AGGACAGC ACGGC GCTGGCCA            TTTACCTGCGTGACC  51 109
   trd_A0104 NONE
   trd_A0105 NONE
   trd_A0106 NONE
   trd_A0107 NONE
   trd_A0108 NONE
   trd_A0109  106075 ..  106090 +    -6  -2.78384   CTACCATCCCAAAGC              GAGCGG TGAA CCGCAC               TGTCCTCCGGCGGCG  47 322
   trd_A0119  115673 ..  115689 +    -8  -2.78715   TGCGTTGGCGAAGGC              TCGCAG GCCTG CTGCGA              TATCGTCGCGGCCTT  51 230
   trd_A0121 NONE
   trd_A0122 NONE
   trd_A0123  121142 ..  121160 +  -6.6  -2.70932   CGCACCGAGGCCAGG             TGCTGCGC GTT GCGCAGAG             TGGTTCCCGCGAGAG  47 178
   trd_A0126  122685 ..  122698 +  -3.1  -3.14132   GGTGGGTGGCGACTG               GCTAA CGCT TTGGC                TTGCTCGGAAAGAGC  44 21
   trd_A0128 NONE
   trd_A0129  124537 ..  124549 +  -5.5  -2.62263   GATAGCATCTGTCTG                CTCCG TGA TGGAG                TCGTGTCCCCACACT  44 352
   trd_A0132 NONE
   trd_A0133  128005 ..  128021 +  -5.7  -3.54424   ACCGCGGGAGGGCTG              GCCGCTG GCA CGGCGTC              TTTCGGCAAGTGGGA  54 167
   trd_A0135 NONE
   trd_A0136 NONE
   trd_A0137  129787 ..  129802 +  -2.4  -3.07043   GGCGCTCGCCGGTAT              CGGCCG AGAT TGGCCC               TATTGAGGTGGTGCA  41 4
   trd_A0138  130502 ..  130519 +  -5.5  -3.61715   CCTCGCCGAACTCGG             CGTCGGT CGGC ACTGGCG              TTATTGAAAGAACTG  54 1
   trd_A0140  131183 ..  131196 +  -2.3  -2.70932   TCAGCGCGCAGCAGT               TGGCG CAGT CCCCA                TCCTTCGACGAGAAG  38 86
   trd_A0143  133499 ..  133517 +  -2.2  -3.85817   CCTCCTCGCCGCGCC             GAGGCCGC AAA GCGCTCGC             TTTCTCAGGAACACT  54 83
   trd_A0145  134310 ..  134336 +  -5.9  -3.09878   GGGCCAGCGACCAGA        GCGGGGCGAGTCC GGC GGACT-GCTC-GC        TGTTCGCTCGCTCCA  51 245
   trd_A0147 NONE
   trd_A0148  139640 ..  139657 +  -2.6  -4.50058   GGTGATCGCGCGAGA             CTGCGG GAACCG CGGCAG              TTTTCGTTCTCGCTC  67 406
   trd_A0150 NONE
        rsgA NONE
   trd_A0152  142785 ..  142807 + -16.3  -2.79915   GCGCTGAAAAAAAGA           GCGGGACGG AATAC CCGTCCCGC           TCTCGTGGACTCGCT  77 251
   trd_A0157 NONE
   trd_A0159  149665 ..  149699 +  -9.8  -3.14931   GGCAACCCGGCCTCG     TTGGCGGCGAGCGCCT GGC GGGCGGCCGCGGCCAG     TTCGTCGGGAGTCCG  62 74
   trd_A0161  151621 ..  151653 +  -6.2  -3.18264   GCCGAGGTAGGCGGC     CCGGGCGACCCG-CTG GCC CGGTCGAG-CGTCCGG     TTGGTCGGTCACGCA  51 228
   trd_A0162  153222 ..  153234 +  -3.3  -3.12351   ACTCGCAGCCCGAAC                CGGTG CGT CGCTG                TTCCCTCTCCGACGG  44 246
   trd_A0164  153945 ..  153961 +  -4.3  -2.64747   CAAACGCGGGACGAA              ACGCTCG GCC TGAGCGC              GTTCTGGTCCCATCG  42 13
        lysX  154982 ..  154998 +  -3.6   -3.6715   GTACCTAGTCTCCTG              GCGAGC GTCGA GCTGGC              TTTCGCCTTGCCTCG  54 113
   trd_A0166 NONE
   trd_A0167  155825 ..  155849 +  -4.2  -4.07687   TGCCGTGCGGAATGG         TC-GCGGTGGC AGTT GCCGCGGCAGA          TTTTGCCGCGCCCAT  61 124
   trd_A0169  157655 ..  157677 +    -9  -2.53995   AACGGTCGGTCAGCG           GAGCGGGGGT ATC GCTCCCGCGC           TGCGTTCGCGTGGGT  54 54
   trd_A0175 NONE
        prpD  163213 ..  163233 +  -5.3  -2.54896   ACCAGCTGCTCGACG            CCCTGCACC GGG GGTGAAGGA            TGAGTTGGATCCGGC  44 9
        prpB NONE
   trd_A0178 NONE
   trd_A0179 NONE
   trd_A0180  165195 ..  165221 +  -5.1  -2.62184   AGCGAATCGATCCGG        TCGGACTGGACG CGCT CG-CCAGTCGGG         TCGTCTCGGACGGGA  44 55
   trd_A0182  166654 ..  166707 +  -5.9  -2.78384   CGGAAATTATTGAGA CATGGTATCATCCAGT-GCGCCGAGC GCT GCTAGGCGCTGGTGGATGAGACGGCG TATCATGACGAGGGA  47 123
   trd_A0183 NONE
   trd_A0184 NONE
   trd_A0185  169591 ..  169605 +  -9.2  -2.60392   TAGTCGGAACGATGG               CGCGCC ACC GGTGCG               GTTGGTTGGCGACTG  54 268
   trd_A0187 NONE
   trd_A0189  171070 ..  171089 +  -8.6  -3.54129   GGGATCGTCAACGCC            CACGGTTGG GTG CCA-CCGTG            TTTGCCGCGCCTGTG  62 311
   trd_A0197  180705 ..  180750 +  -5.3  -3.09193   GAGACAGGCGATCCA GTCGGTGGTCGTGCTCCTCCGT CTT GCGGGTCAGCGCGGTCA-CGGC TTCGGTCAATGTGGT  49 420
   trd_A0198 NONE
   trd_A0199  181932 ..  181959 +  -4.8  -3.15861   AGCCGCTGACCTTCG        GCAGCTCGGCGAG CGC CTGGCGGA-CTGC        TTCCTCGGGATACTC  47 241
   trd_A0203 NONE
   trd_A0204  187430 ..  187488 + -23.9  -3.58343   TCGGCCACGCGGAAT CGCCGCGCCACCGGCGCGGCGGGCGAGGC GCC GCCTCGCCC-CTGCGC-GGTGAGGTGGTG TTTCGGCGTCGTGCC 100 336
   trd_A0205  189797 ..  189813 + -15.1  -2.70932   GCGGTGCCTGACCCG              CCGGCCC AGA GGGCCGG              TCATTGCGGCGGGAG  72 399
   trd_A0208  193022 ..  193064 + -18.4  -3.14132   GCTAGTCCGAAGCGT AGC-CGCGCCCCGGTCGGG CAGCCA CCCGACCGGGGCGCTCGCG TTCGTGGGGCAGCGG  90 36
   trd_A0209  193812 ..  193828 +  -5.7  -2.79183   CAGTTGCGCCAGGGG              TGCGGCC CGA GTCCGCG              TGTCGTCGCGGTGGC  45 106
   trd_A0210 NONE
   trd_A0211 NONE
   trd_A0212 NONE
   trd_A0213  198474 ..  198500 + -19.5    -4.371   GGCGGCGGAGGTCAG         CAGGGCGTGGG AACTC CCCACGCCCTG         TTTTGCTGTGGTCAG 100 44
   trd_A0214 NONE
   trd_A0215  204817 ..  204857 + -27.7  -3.64703   GGGCGCGGGCGTGCC  GGGACTGGCTCGGCTGGGG CGA TCCCGGCCGAGCCAGTCTC  TTTGACTGGCCGGCG 100 45
   trd_A0216 NONE
   trd_A0217  207354 ..  207366 +  -4.8  -2.71712   CTCGTCCGCTAGGGA                CGGT CGCCC ACCG                GTTTGCGCCCGGAGC  43 29
   trd_A0218 NONE
   trd_A0219 NONE
   trd_A0220  210026 ..  210040 +  -2.8  -2.52516   AACTCCAGGGTCAGA               TCATCA AGA TGCTGA               GTTCGTGATGGGCGG  39 3
        fliS NONE
   trd_A0222  210860 ..  210900 +  -5.4  -2.79302   GATCGCGAGGCATGA GCGATGCGCG-TCCGGTCTG GCT CGGTCTCGATCGCG-ATCGC TGTGCTGGGACTCCT  45 26
   trd_A0223  211858 ..  211903 + -14.7   -3.2964   ATAGGGGCGACGCGC TGTGTCGCCAGCCGGGTCACCG GCG CGGCGACCTGGGTGGCAAC-CA TTCTCACAGCCATTT  78 352
   trd_A0226 NONE
   trd_A0227  216034 ..  216046 +  -6.9  -2.53382   CGAGGAGTCACGGGC                GGCCG TAA CGGTC                TCCATTCGGCGTGGT  47 50
   trd_A0228  217636 ..  217681 +  -6.1  -3.21099   ATCGTCGAGGTCACC TGAGTAGAACAGCCGGCGCGG AGGATA CCGCGCCGGC--TCCCGCTCG TTCCTCCTGGCGGGC  51 23
   trd_A0232 NONE
   trd_A0233 NONE
        modA  222786 ..  222798 +  -2.6  -2.78463   AGCGAGCCAGGGAGT                TGCG GATGA CGCG                TGTCGTGGAGACAGT  38 17
        modB NONE
   trd_A0236  224469 ..  224481 +  -3.3  -2.91593   GAGTGGGTAGCTACT                CGGGT ACC GCCTG                CTTTGTCCGACAGTC  41 31
   trd_A0237  226396 ..  226415 +  -9.2  -2.72991   TCACCGGCGCGTCTC            CACCGAGC GTGC GCGCGGTG             TCCTTCGCGCTCTGC  55 78
   trd_A0240  228865 ..  228881 +  -9.3  -2.85896   CGTCCAGCGAGGGAT              CGCGAGG GAT CCGCGCG              TGGTTGGTTCCTCCC  56 66
   trd_A0241 NONE
   trd_A0243  230190 ..  230206 +  -6.5  -3.36327   GGACACTGCCAGTGT              TGCAGAC CGA GTCGGCA              TTCTGGATCGCATAC  55 213
   trd_A0244  231656 ..  231684 + -12.4   -3.7948   CCAGTCTTCGTCGTA       CCGGTCGACGACG AGAG CGGCG-CGACCGG        TTTCCTCGATATTGC  81 249
   trd_A0246  232880 ..  232907 +  -6.2  -3.36878   TCGATCATCTCGTAC        CGGGTGTTTCGCG ACT CGCG-GACTCTCG        TTCTCGGTGCCTGCA  55 183
   trd_A0247 NONE
   trd_A0248 NONE
   trd_A0249 NONE
   trd_A0250 NONE
   trd_A0251  238035 ..  238061 +    -8  -3.10012   GATAGCCGGTTGCAA         CATGGGTGAG AAAATCG CTCACCCAGG         TTGAGTAGTCGCGTT  54 171
   trd_A0255  241089 ..  241101 +  -9.1  -2.81547   TGGCGGCGGTGGCAG                TCCGC GCG GCGGA                TCGTTGCTGTGACGC  56 228
   trd_A0256  242148 ..  242182 +  -5.6  -2.87132   GTGCGGTAGGCTTGG    GCCA-CCGGACCGCT GCTGGA GGCGTGCCGGCTGGC     TGTGTCCGGAAGGAA  46 32
   trd_A0257 NONE
   trd_A0258 NONE
   trd_A0260  245695 ..  245715 +  -8.1  -2.71731   GCGCTGGGCCAGCCA            CTCGGCGCG CAG CGCGGCGCG            TCGTTCGGCGCTCAG  51 307
   trd_A0264  250505 ..  250538 + -10.2  -2.73364   GAGAAGGTAGAGGCG     GCGGTGCGAGCGAC CGGGCT GTCGCGCATACCGC      TGGTTCCGGTAGCCC  57 202
   trd_A0266 NONE
   trd_A0267  253580 ..  253590 +  -2.4  -2.52464   CGTTGAAAGGCTGAC                 GCGC GGA GCGA                 TCGATTCGACGCGGC  37 27
   trd_A0268 NONE
   trd_A0269 NONE
   trd_A0270  255789 ..  255804 +  -4.6  -3.03338   CGAGGGTACGTCGTG              GAGCGG TATT CCGGTC               TCTTCAGCGAGTTCT  45 349
   trd_A0275  260113 ..  260137 +  -2.1   -4.4522   GCTGTTCAGTTCACC          GTCGCTGGA ATCCTTC TCCATTGAC          TTTCTTCTGCTTTTG  67 322
   trd_A0278 NONE
   trd_A0279 NONE
   trd_A0280  268611 ..  268622 +  -3.6  -3.13403   TAACGGAGGCTGCCA                GTGC TGTT GCGC                 TATTCCTCCCGACGC  45 38
   trd_A0281  271332 ..  271344 +  -3.3  -3.39595   GCGCGTCGAACAAGC                GACTC GCT GAGGC                TTCTCCATCCTTCGA  48 44
   trd_A0294 NONE
   trd_A0295 NONE
   trd_A0297  283578 ..  283594 +  -2.1  -2.60496   TCCCCGGCTCCATGC              CCGTGGG TGT CCGAAGG              CTCTTTGCGCGCCGC  38 130
   trd_A0298 NONE
   trd_A0299  285385 ..  285401 +  -4.3  -2.62184   CATCTACTTCTTGCG              TCATGCC CTG GGCTTGG              TCGTCTAGGCCGGGA  42 1
   trd_A0303  286167 ..  286184 +  -7.7  -2.52623   ACCCAGACGAGACCG             TCGC-CGC CGC GCGTGCGA             ATGTTGTGGACACCC  49 200
        menB  288649 ..  288671 +  -2.6  -3.09015   ATTTCTCCAAGTTCC           CGCGCTTC CCGTGAT GGAGCGAG           TTGCATGAGTGTCCC  42 12
        menA  289594 ..  289611 +  -4.1  -2.53382   GCTCTGGGGTTGCTC             GG-GTGAG CGG CTCGCGCC             TCGATTGGCGATGGT  40 20
        menC NONE
   trd_A0307 NONE
        menE  292559 ..  292576 +  -7.7  -3.76492   AACGCGGAGTGAGGT             GCACG-GC AGC GCTCGTGC             TTTGCTGGCGTTGCC  66 29
   trd_A0309  295355 ..  295382 +  -7.6  -3.31144   CGTTTCCCAGGAATC        GCGGC-GCGGCCA GCG TCGCCGCAGCCAC        TTGTGCACCTCGACG  56 189
   trd_A0313 NONE
   trd_A0315  301990 ..  302008 +  -3.7  -2.62735   TTGATTCCCATGAGG             GCACCGT ATCCC GCGGCGC             TGGTGTGCAGGATAT  40 443
   trd_A0316  303338 ..  303353 +  -3.2  -4.26076   AGACACTGCCCGGCC              TCGGGA GTCG TTCCGG               TTTTGATCCCGATGA  63 239
   trd_A0321 NONE
   trd_A0322  308803 ..  308813 +  -2.4  -3.66018   GGGCCTTGTAGTACA                 GCTC GTA GCGC                 TTCTTCGGATCCTGC  51 446
   trd_A0345  334788 ..  334801 +  -2.3  -3.54424   AACGTGCGTAGGCTT               CAGGA CGCG TCCGG                TTTGGAGCGATGACC  48 109
   trd_A0346 NONE
   trd_A0347  336932 ..  336945 +  -8.1  -2.63913   CCGAGACGAGCAGCT               GCAGC AGGT GCTGC                TGCTCTAGCGTGATC  50 4
   trd_A0348  337793 ..  337822 +  -3.6  -4.99861   GTCGTTGAGGAGGGT      GCGGTGGCCGAGTC ACCG GACT-GGCT-TCGC       TTTTTCTCGTTGATC  81 33
   trd_A0349 NONE
   trd_A0350  339956 ..  340011 +  -9.1  -3.53224   AATGGTGCGAGACCG GATGCGTCGG-CGGAGCACGGGCAG-CA GGG TGATTGCGCGCGCTCCGATCGA-GCGTC TTTCCAAGCAGGATC  64 171
   trd_A0351 NONE
   trd_A0353  342497 ..  342539 +  -7.5  -3.06183   TGGCGAAGAGTTCCC GGCGCTGGCGTCGCCCTCC GGTAA GGAGGGCGACAGTGCCACC TTCACTGGGCATCGA  53 93
   trd_A0356  346963 ..  346980 +  -9.9  -2.94144   GACTTCTCGGGAAAC             GGATGAG AACC CTCATCC              TGCTTTCGCTGGGAG  59 132
        glpK  349400 ..  349429 + -12.8  -2.83715   AAGAGAATACCAGAC       GTCGACTCGCCG AACGGA CGGCGAGACGGC        TGTCATCATCGTCGC  66 225
   trd_A0363  353236 ..  353252 +  -2.1  -2.78018   CCGGTCATGAGGGTG              CCGAACG ATG CGGTGGG              TGATTCCTCGCCCGT  38 31
   trd_A0364  354478 ..  354501 +  -4.4   -2.5632   ACACGGAAAGGATAG          GGGTGTGCGG CGAG TCGCAGTCCC           ATTCATCGTCTATTG  42 40
   trd_A0365  354908 ..  354942 +  -3.6  -2.83164   GGTGAGGCTGCCGAC    TCGCGAGGTGCCG AATAGCGTCG CGGCAC-TCGTGG     TATCCTCGTGGGTCG  43 8
        trpS NONE
   trd_A0367 NONE
   trd_A0368  356611 ..  356650 +  -9.3  -2.87564   TCCTCGCCGGTGTTC  GTCG-AGCTCTGCCCGGA CCTCA TTCGGGCAGGGCTTCAGC  TCTGTCCGGGGGTGC  56 52
   trd_A0377  363750 ..  363763 +  -3.7   -3.2794   AATCGCTCGAGTTGA               GCAGG ACGA CCGGC                TTGGTGTGGATACCG  47 210
   trd_A0378  364676 ..  364690 +  -4.2  -3.14683   GAAGGACGCGCTCCA               CCCTAC CGA GTAGCG               TTCGTACCGCGCTGT  45 39
   trd_A0379  364986 ..  365000 +  -7.8  -3.14132   GACCCGAGTGGGCGG               GCGATG ATG CGTCGC               TTCCTCACGCACAAC  54 135
   trd_A0382 NONE
   trd_A0383  368324 ..  368337 +  -6.7  -4.17762   GGTGCCAATTTGTCA               CTGTG TGGT CACAG                TTCTTTTGCAAGATG  72 181
   trd_A0384  369525 ..  369559 +  -6.3  -3.10975   GTGAACGTAGGGAAA    CTCGCCGACTGGCGGG ACGG CCCGCCCGT-GGAGAA     TCTTGGCTCCTCCCT  51 130
   trd_A0387  372300 ..  372314 +  -2.1  -3.16564   AGGGATGAAAGGGAC              GAGGCG ATGA CGC-TC               TTGCTGGGGTACACC  42 33
   trd_A0388 NONE
   trd_A0389  374287 ..  374310 + -13.9  -3.00923   AACGGACTGCTGATG          CGCGCCGAA CCACAC TTCGGCGCG           TCTGTCGTCTTCGCC  72 44
   trd_A0390 NONE
   trd_A0391  378701 ..  378712 +  -5.8   -3.4285   CCGTGCGGTAGTTCG                CTGC GCGA GCAG                 TTCTCGCTTCCGTGA  53 126
   trd_A0392 NONE
   trd_A0393 NONE
   trd_A0394  381450 ..  381464 +  -7.8  -2.62184   GCTACCAGTGGTAGA               CTCGCT ACC GGCGAG               TCGTGTCGGGAAGCG  50 74
   trd_A0395  383442 ..  383475 +    -3  -4.61231   TCACGGATCGCGGAT     CAGGGGCAGCGT GGAACAGTGG ATGCCGCCCCCG      TTTTTGAGGATCTCG  71 157
   trd_A0397  385686 ..  385698 +  -2.6  -3.00525   TTGTCCTACAGCGAC                GCGG CGAAC CTGC                TATGATTTCGCCGCG  41 51
   trd_A0398  387173 ..  387195 + -10.6  -3.74361   ACAGGTGCCCAGTGG           GCTCCCTC AGGTGAA GAGGGAGC           TTGTTCATCCCTCTG  73 176
   trd_A0401 NONE
        pfkB  391187 ..  391199 +  -5.5  -4.18401   CGCGGCTGCTGGTTT                CGAGT ACA GCTCG                TTTTCCGGTATGTCG  69 201
   trd_A0403  391836 ..  391853 +  -4.7  -2.78816   ACGGGGGCGTCAGCC             GCGACCG GACC TGGACGC              TCTAGTAGGAGGTCG  43 3
   trd_A0404  392657 ..  392667 +  -2.4  -2.63913   CTCGTGCACTCGCTG                 CACC GAT GGCG                 TGGTCTACCATCCTG  38 53
   trd_A0405  393686 ..  393725 +  -7.1  -3.77206   CTGCGGGCGAGGTCT  GGGCGATCCTGCTGACCG CGACT CGGTC-GCAGAGTCTTCC  TTTGGTGAGCTTCTC  64 11
   trd_A0406  394659 ..  394673 +  -2.1  -3.08679   AGCGTGATCAGCGCT              GTCGGC GCGA GCC-AC               TCTTCCCTGAACGGC  42 105
   trd_A0407 NONE
   trd_A0408 NONE
   trd_A0409 NONE
   trd_A0410 NONE
   trd_A0412  400447 ..  400459 +  -3.3  -3.53811   CCTCGTCGGGACCCG                GCCGT GGA ACTGC                TTTGGGCGCAGTCCG  49 262
   trd_A0413  400766 ..  400812 +  -7.2  -3.03124   CGCCAGCAGATCCCC CGAGCCCGAACGCGTCGT GAATCGCTGGA ACGGCGCGTGCGACCTCG TCTTCGCGGATCACG  51 216
   trd_A0415  403814 ..  403857 + -16.8  -3.63744   GCGATGCGGTGTAAC CGGACCGGGTGCTCGTTC GTTGTATG GGATGAGCACCCGGTCAG TGTTTTGCGAGCGGA  91 41
   trd_A0416  404792 ..  404825 +  -2.2   -3.4072   ACGGTGCCATGAGAA     GTGCAGCCAGCAGGC AGAAG GCC-GAAGGCCGCGC     TTCTGATCCGAGGTC  46 29
   trd_A0417 NONE
   trd_A0418  407837 ..  407873 +  -3.8  -3.35679   TGCCGAGCAGCGATC   CG--ATACGCGTCAGC CACCGGT GCTGACGCGCATGACG   TTGTCAGTAGGCGCG  49 129
   trd_A0420 NONE
        thiI  409863 ..  409899 +  -5.8  -3.05844   GGGTGGCCCGCGTGA   GTCCGGCGTG-GC-CGTG GTG CACGCGCTCGCGCCAGAG   TGTTGCCGTCACGAG  47 204
   trd_A0422  410926 ..  410939 +  -2.3  -2.94045   CACCGGAGAGCATGA               CCGGT CGAA AACGG                TGCTTCTTGAGCTGG  40 265
   trd_A0424  411604 ..  411628 +    -2  -4.74103   CTGGGCGAACAGTTC         GGC-CTGGAGG GCCT CAGCCAGTGCC          TTTTTGGCTTCCGCC  74 498
   trd_A0431 NONE
   trd_A0432 NONE
   trd_A0433  420011 ..  420046 + -16.8  -4.36914   CAGCGTGGAGCCAGT    GGCGCACCCGGCCGGG ATAT CCTGGTCGGGTGCGTG     TTTTCTGGGAAGCGA 100 233
   trd_A0435  421246 ..  421273 + -20.6  -3.36273   CAGCGAAGCTCACGA        GCGGGCTCGGGA GGAC TCCCGGGCCCGC         TTCCTGTTCCCCAGC 100 55
   trd_A0437  422709 ..  422738 +  -9.2  -2.58544   CTGGGCGATGCCGAT       CTCCAGCGCTTC GCGGCA GACGCGCAGGAG        CTTCTCGGCCTCCGG  54 376
   trd_A0438 NONE
   trd_A0439  424427 ..  424480 +  -4.3  -3.02966   CGAGGAGCGTGGCGA GGACGCTCGCGGATGTATTGTCCAA GCTG TGGGACGGAGCAGCCGCCAGGGCCC GTTTGTATCGCCTGT  45 67
   trd_A0440 NONE
   trd_A0441  425904 ..  425942 + -16.1  -2.73681   CTCATCTCCTCCTCA   CGTGCGAGGCAGCTG GCTTTTCCG CAGCTGCCTCGTGCG   TCGTTCGGATGGGTA  77 403
        ftsH NONE
   trd_A0443  429117 ..  429130 +  -8.1  -2.70932   TGCCGCTCGTGGGAA               CGGCA TAGA TGCCG                TCGTTGCGGCGGAAC  51 319
   trd_A0445 NONE
        fabD NONE
        fabF  433431 ..  433459 + -21.9  -2.96216   GCGGTTCGTGCGTGA        CTCGCTCACCAGT CGA ACTGGTGAGCGAG        TGTCTCGTCCTCGAC 100 61
   trd_A0451  438671 ..  438688 +  -2.6  -2.56761   GACCGTCTCGAGATC             GCGTGT GTGACA ACTCGC              TCGGTTCAGCTTTTC  38 16
   trd_A0452  439984 ..  440000 + -10.1  -3.35046   CGACGGGAGCACGCT              GCTTCGC CAC GCGAGGC              TGTTTCCGCCGCTCG  63 71
   trd_A0453 NONE
   trd_A0454 NONE
   trd_A0455 NONE
   trd_A0456 NONE
   trd_A0457 NONE
   trd_A0459 NONE
   trd_A0460  449082 ..  449103 +  -7.9  -3.93288   GAGACACCAGCCGAT           CAGCGGGTC GACG GACTCGCCG            TTTACTTGGCTCGGC  68 443
   trd_A0465  454096 ..  454118 + -13.5  -2.71263   GTCCCCTGGTCGCTC           GCCTTGACC ACGAC GGTCAAGGC           TGCTTCGCCCCGCTT  67 58
   trd_A0475  464753 ..  464776 + -15.2  -3.14931   GTCGACTGTCCACTT          GCGCGCCGCG AGCT CGCGGAGCGC           TTCCTCCCGCATGAC  76 264
   trd_A0477  465452 ..  465466 +  -8.5  -3.21099   GCGCTACCGACCAAA               GCGGC CAGCA GCCGC               TTGGTGATCGGCAAC  56 370
   trd_A0483  472132 ..  472143 +  -5.8   -3.5393   CTGGCCCGGTTGGCG                CGTG AACA CACG                 TTTGCCAGCGATCGT  54 326
   trd_A0493  484263 ..  484291 +  -5.3  -2.78463   AGGGTTCCGGTGACC       GTTCGGACG-AG AGTCCG CTGCGTCCGCAC        TGTCATGAGAGCGGT  45 237
   trd_A0496  487577 ..  487601 + -13.5  -2.66964   GAAAGCCGGCTCGTC          GCGCGCTCGGC CGG GTCGATCGCGC          TGGTCTCGTCCATCG  67 170
   trd_A0500 NONE
   trd_A0501  491408 ..  491433 +  -2.5  -3.59979   GGTGCAGGCAGGTCG         CGAGCG-CAG GGGAGGA CGGACGCTCG         TTTCGGCTGGGCGCA  48 173
        citZ  494591 ..  494603 +  -3.3  -2.90392   GGTCAGGCGAGGCGA                TCCGG CTC TCGGG                TATCCTTGACCCATG  41 69
   trd_A0504 NONE
   trd_A0505 NONE
   trd_A0506 NONE
   trd_A0507  499672 ..  499707 +  -2.5  -4.11692   ACTCCTTTGTCGCTG    AGTTTCTCGCGTC CGATGCGGAT GACGCGCGGAACC     TTTTCGGGATCGATA  58 246
   trd_A0510  501312 ..  501368 + -13.6  -2.87881   TTGGACTACCCGGGA AGAGC-GCGTGGGCTGGACCGGGCGAA CTGG TACGATCGGTCCAGCCCACGCAGCGGG TCTCTCACCCGGTTC  69 74
   trd_A0512  503071 ..  503091 + -11.1  -3.31144   CAGCAGGGCGGTGGA            GCGTCGCCG CGA TGGCGATGC            TTCTCGCCGTACCGC  66 79
   trd_A0513  504437 ..  504463 +  -4.4  -3.76492   CACTGAACCTTCTCA        GGCGGTCGGCA GGCTGG TGCTG-CTGCC         TTTACTGGAGTTCGG  58 193
   trd_A0514 NONE
   trd_A0515  508565 ..  508584 +  -9.2   -2.8598   TCGCTCGGGCGGGAT            CGGTCGTG TCTG CTCGACCG             TGGTTCTCCCTGTCT  56 110
   trd_A0516 NONE
   trd_A0519  512481 ..  512492 +  -5.8  -3.35813   CACGCGTTCGTTCCC                CTCG TCAC CGAG                 TTCGTTGACGTAGAC  53 190
   trd_A0524  515713 ..  515733 +  -6.8  -4.60041   CGAGGCGGCCGTCAC            GGGGATGC CGTCA GCGTCTCC            TTTTTGGGCATGACT  79 56
   trd_A0528 NONE
   trd_A0529  523000 ..  523030 +    -4  -4.34345   AAATTCGCCGTCCGG      CGAAC-GAGCCGG ATCGTG CTGGCTCTGTTGG       TTTTCCTCCTCTCTC  68 142
   trd_A0531  523680 ..  523710 +  -4.6  -2.67515   GCCTAGCTCATCATC      GTCGG-TGGAGCG ATCAGG CGCGCCATCCGCC       TCGTCTGATCGTGCA  43 35
   trd_A0536 NONE
   trd_A0537 NONE
   trd_A0538  531527 ..  531554 + -19.2  -2.66316   CAAGGTGGAAGGCGA        GCTGGCTGCGCA GCAC TGCGCGGCCAGC         TCATGTAGTGAGAGG  93 53
   trd_A0539  532655 ..  532683 + -16.8  -3.44051   TGGTGGGAAAAGCAA        GAACCCCTGAGG ATGTC CCTCGGGGGTTC        TTATCGTGGTAGCGG  87 57
   trd_A0540  533448 ..  533464 +  -5.1  -4.48221   GGGCCCGATCAGCCT              GTTATCC CCG GGGTAGC              TTTTATCCGTTGATC  74 470
   trd_A0543  539791 ..  539814 +    -6  -3.94188   TGACTCGCCGACGGC          GCAGCTCG GAAGTCAA TGAGCTGC           TTCTTTCCGCTGAGT  64 7
   trd_A0544  540530 ..  540586 +  -5.5  -3.18264   CAACTGCAGGAGTTG GACGCGGATCCCCGCCGGAATGCGCTC GCG GATCGCATCCAGGTAGTGCGCCGCCTC TTCCTCGATGGCGGC  49 300
   trd_A0546  542701 ..  542719 +  -2.2   -3.6715   TGCTCCTCGTCGATA             CCGGGAAC CTT GCCCTCGG             TTTCCAGTTCGATGC  51 234
   trd_A0550 NONE
   trd_A0551 NONE
   trd_A0552  545782 ..  545794 +  -3.3  -2.86164   GAAGGATGAGAAAAA                CGGTC GCC GACCC                TCTGCTCGTTCAGGC  41 71
   trd_A0555  547521 ..  547537 +  -8.7  -2.63631   TCGAACCCACAGCCC              GCGGATT AAA AGTCCGC              TGCTCTGCCAGTTGA  52 262
   trd_A0557 NONE
   trd_A0558  548242 ..  548278 +  -7.2  -3.02461   CGCGGATAGCGCGAT   GCGCGGCAAGTGCTCGCC AAC GGCG-GC-CTGGCTGCCC   TCTTCGCGGCGCTTC  51 32
   trd_A0560  549105 ..  549123 +  -5.9  -3.25192   GCCGCGCAGGAAGGC             TGGCCCG TGCGT CGGGTCG             TATTGTGAGCTTCCG  53 331
   trd_A0571 NONE
   trd_A0572  566582 ..  566594 +  -4.8  -3.55444   GGCGGGGAACGCCCA                GCGA ACGTA TCGC                TTTCCGCGATGACCA  52 1
   trd_A0573  568039 ..  568089 +  -2.5    -3.889   CGGTCGGAGCGAGCG CGCCAGTCGTTCTGCGAC-CGCTT GCAG AAGTGCGTCACCGAACAAGTGGCC TTTGGTATCGTTGAG  54 337
   trd_A0576  571932 ..  571954 +  -5.5  -2.60079   AGCCGAAGCGCGCCG           CCCTTGACT GACCG AGACAGGGG           TCACTTCTGCAGTAG  44 15
   trd_A0578  572986 ..  573004 +    -3  -3.09557   AGGCCCGATAGCGAA             CGGGGAAA GGA TGTCACCG             TGTATTCCCGTCGTT  44 30
   trd_A0579  573544 ..  573580 +  -4.4  -2.64091   GCCGCCGTGAAGGGG    GTGACGAACGATTCCA CGACC TGGAATCGCTCCTCGA    TCGTCTGCCGTAGTT  42 248
   trd_A0582  576809 ..  576825 +  -2.2  -3.90318   GCGCAGTCGGTGACC              TGCCAT CAACC GTGGCG              TTTGTGGGGTAATGG  56 201
   trd_A0584  577575 ..  577585 +  -6.8  -2.52464   GTCGGAGCGTTCGCT                 CGAG CAC CTCG                 TACATTGGGGCCCAC  47 214
   trd_A0596  587171 ..  587194 +  -5.2   -2.9665   GCGGTGGACGCTCGA          AGAGCACCCA GACA TCGGTGCTCC           ATTTCTCCGGTTTGG  47 220
   trd_A0598  589320 ..  589330 +  -2.4  -3.70902   GCGAACGGGTGGAGG                 CTGC GCG GCCG                 TTTGACTATCCCCCC  51 66
   trd_A0599  590909 ..  590936 +  -4.8  -2.71731   TCCTGCTTCGTCGTC        CTGCCCGAGC-TC GTT GACGCTCCGCCAG        TCGTTCGCGCATGGC  43 9
   trd_A0601 NONE
   trd_A0602 NONE
        cbiQ NONE
   trd_A0604  595967 ..  596016 +  -9.1  -3.15579   CCAGGACGGTGCGCT CGCGCTCCGTGAGCTGCTCCAGGC TGC GGC-GGATCTGCTCGCGGATCGCA TTGGTCAACGCTTCC  59 260
   trd_A0609 NONE
   trd_A0610  602415 ..  602445 +  -4.7  -2.79796   CGTCAGCGGGGAGCC       GGACGATGCATCT GAGCG AGACGTATCGTCG       TATAGTCCAATGCGG  43 66
   trd_A0611 NONE
   trd_A0612  604059 ..  604083 +  -9.9  -3.55563   CCAAAGGCGAACTCG          CCGACGAGGCG TGC CCCCTCATCGG          TTTCCAGCATGCGAT  67 256
   trd_A0615 NONE
   trd_A0616 NONE
   trd_A0617 NONE
   trd_A0618  609272 ..  609288 +  -4.3  -4.33274   GTTCACCACTGCCTC              TCGCTCG CCG CGAACGG              TTTTCGTAATCTGCA  69 182
   trd_A0621  611895 ..  611920 +  -4.5  -3.14051   GCGCTCAACGCCCGC         GGAGCGCCCGT ACCG ACGGCAGCCCC          TGTTCGTCGAGATAC  47 109
   trd_A0623  613855 ..  613877 +  -4.8  -2.64616   TCGCGTGCCGCACAT           GATCGCGC GTCACGA GCGGGATC           TGGTCTGCATCCAAC  42 453
   trd_A0627  618372 ..  618399 +    -2  -3.48276   CCGACCGGTCGGACT        GTC-GATCCGG TAGGCGC TCGGATCCGGC        TTGTATGGCCGCAGC  46 79
   trd_A0632  623418 ..  623429 +  -5.8  -4.07568   GATCGACTCCGTTAG                CGAG CACT CTCG                 TTTTCAAACCCGGCA  64 172
   trd_A0634  625039 ..  625072 + -21.8  -3.27022   AAGCTCGAGCGAGTC     G-GCGCCGGGTCGGG CTCAT CCCGACCCGGCGCTC     TTCCTATAAGCTGAA 100 42
   trd_A0635 NONE
   trd_A0636 NONE
   trd_A0637 NONE
   trd_A0638  629778 ..  629792 +  -2.7  -3.18681   ACAACCAAGCTCACC               CCCGC GAGCA GCTGG               TTGATCAGCTTGACC  44 417
   trd_A0657 NONE
   trd_A0658  649409 ..  649427 +  -9.5  -3.35522   CGAGACAGCTGCAAT             CCTCCCG TCCTC CGGGGGG             TCTTTCAACGAGTTG  63 55
   trd_A0660 NONE
   trd_A0661 NONE
   trd_A0662  653590 ..  653601 +  -5.8  -3.17763   CGGCACCGGTGGCAG                CTCG ATCC CGAG                 TTCCTCGAGTCTCCG  49 452
   trd_A0664  654744 ..  654768 +  -3.4  -3.66288   CGCCCTTGCGGCGCT          CTGCGGGACG AGTCC TGTCCCCCTG          TTCTCTTGCCGAGTC  53 137
   trd_A0665 NONE
   trd_A0666  658465 ..  658475 +    -4  -3.54424   GTGGTACTCGCTGGC                 TCAT CCG ATGA                 TTTCCGGAGGTAACC  51 2
   trd_A0668 NONE
   trd_A0669  661134 ..  661165 + -15.3  -4.66833   CCGCTGCGGCTGATA      GCCTCTGCTCGACC AGTCC GGTC-AGCAGAGGC      TTTTTGACGTTAGGA 100 418
   trd_A0670 NONE
   trd_A0671 NONE
   trd_A0672 NONE
   trd_A0673 NONE
   trd_A0674  666272 ..  666288 +  -2.1  -3.05844   CCTGTTCCAGGTCCT              GCCAGAG TTC CTCCGGG              TGTTCCAGTCCGACC  41 62
   trd_A0676  668815 ..  668853 +  -8.1  -2.78384   CGTGCCATCAGGCAC  CGCT-CGG-GCGGCGCTCC TCG GCAGCCTCGCTCCGCAGCG  TGTGCTCGCCCGACC  51 271
   trd_A0679 NONE
        thiO  674478 ..  674495 +  -6.9  -3.14132   AGCCGTGACCTCCTC             CCGTCGG CATC CCGACCG              TTCCTCGACGAGCGG  52 504
   trd_A0694 NONE
   trd_A0695 NONE
   trd_A0696 NONE
   trd_A0697 NONE
   trd_A0699  690507 ..  690521 +  -3.4  -3.97947   GCGTGAGAGGGCGAA               GGCGGC ATG GTCGCG               TTTCTGATCCGTCGC  58 130
   trd_A0700 NONE
   trd_A0701 NONE
   trd_A0702  693269 ..  693279 +  -3.2  -2.52543   CGCCCAACGCAGGGG                 GTGT TGC GCAC                 TGACTTCCCCCGGCT  39 12
   trd_A0704 NONE
   trd_A0705 NONE
   trd_A0706  697170 ..  697198 +  -5.1  -3.21099   CCTGCAGAAGATCAC        GCGGACGCGATGA GGA TCGCCGCATGCGC        TTCGTCCTGGCCGGA  49 13
        nagA NONE
   trd_A0708 NONE
        anmK NONE
   trd_A0710  701126 ..  701144 +  -3.1  -3.32698   CGACTGCTCGTCCTC            GCCACGGCG GAA CGC-G-GGC            TCTTCTATGGCGTCC  46 62
   trd_A0711 NONE
   trd_A0715  706824 ..  706836 +  -2.6  -2.70932   CGCACTGCAACGACC                CTCG GGCGA CGGG                TCCTTCGAGCAGACC  38 166
   trd_A0717  709233 ..  709256 +  -2.2  -2.60512   ACCATGGATGGTCGG          GACGCTGCTC CGAC GAGACGCGAC           TGGCTTCGTCTTGCG  38 59
   trd_A0730  722549 ..  722564 +  -5.4  -2.55015   GGAGGATCATCGGTC              TCACTG CAGC CAGTGG               TCGGTTGGGTCGACT  44 165
   trd_A0732  723061 ..  723078 +  -3.3   -3.4252   CACCCCGCGCCCACT             ATGCGGT TGCC GCCGCAG              TTGTCCTCACTGGAG  48 150
   trd_A0733 NONE
   trd_A0734  724081 ..  724092 +  -7.2  -3.28712   CTTCTCTCGGTGCGG                CCGG TTAT CCGG                 TTGTCCCAGCCGCAA  54 92
   trd_A0735 NONE
   trd_A0737  726861 ..  726882 + -11.5  -3.01712   GAAGACGGCGATCAC           GCGACCGAG TGCC CGCGGTCGC            TCTTCGGGGAGAAAG  65 73
   trd_A0738 NONE
   trd_A0739  729465 ..  729481 +  -5.1  -3.35438   GCCGTACGTCGGACC              GTTTGCG GTG TGCAGAC              TTCTCCCGTATCGTG  53 360
   trd_A0744  733691 ..  733734 +  -2.1  -3.21593   CTCGACTGGACACCC ATCCGTCCTCGCCCGCCAG CGCTGT CAGGCGCGCCTGTACGGAC TCTTCTGCGCCGGTC  44 251
   trd_A0748  736185 ..  736202 +  -2.7  -2.52464   TGCAAAGGAGTATCA             GGTGA GACGCTGG TCACC              TGAGTTCGCGCGACA  39 41
   trd_A0749 NONE
   trd_A0750 NONE
   trd_A0752  738998 ..  739021 +  -4.4  -3.05596   GGAGATCGCCAGGCT          GCCGTCGGGC GCGA GATCGACCGC           TTGGATCGGAGCATC  45 400
   trd_A0754  741990 ..  742007 +  -9.1   -3.6682   GTGCTCCCTCTGCCT             GC-CCCGG TAC CCGGGTGC             TTTCGCTCGCTGAGC  68 197
   trd_A0756  742400 ..  742417 +  -4.7  -3.67597   TGATCGTTCTGCCCT             TTCGCCG AATA CGGCGCG              TTCTTCCCTGGCCAG  55 38
   trd_A0757  742693 ..  742745 +  -3.3  -3.53012   GGACCGCGGCGAATG ACCGCGCCACGATGTGGATCCGCT GAGCGG AGAGGAGCTGCGTCATG-CGCGGG TTTACCAACGGACAG  49 0
   trd_A0758 NONE
   trd_A0759  743549 ..  743569 +  -8.1  -2.87344   ATCGGTGTCATCCGT            CGCGCCGCG AAC CGCAGCGCC            TGTGTGGAACGGGTA  52 74
   trd_A0760 NONE
   trd_A0761 NONE
   trd_A0762  744689 ..  744722 + -10.1  -3.33815   GGAGCGCGGCGCGCC     TCGCCCGCCCGCGCC GGAT GGCGCGGGTACGTGG      TTCGTTCCCGGGCCT  63 237
         soj  746187 ..  746204 +  -2.5  -2.93382   TGCCATCGTCGAACT             CGTCGGG AGTA CCAGTCG              TGTCTGAGTCTCCGC  40 1
   trd_A0765  747343 ..  747357 +  -5.7  -2.74563   CACGATCGGGACAAT               CGAGT CAGTC ACTCG               TCCTTGACCTGTCGC  45 178
   trd_A0766  748346 ..  748356 +  -2.4   -3.6106   GCCCGGCAGCAATGC                 CCGG CCG CCGC                 TTTCCCGGTCTTGCG  48 66
        accC  761524 ..  761551 +  -8.3  -3.87815   GCAACCAGTACCGAG        ACCGGGAGTGC TGCCCC GCACCCCCGGC         TTTCTGACGATGCGC  68 67
   trd_A0782 NONE
   trd_A0783 NONE
        panB NONE
        panC  768669 ..  768694 +  -4.5  -3.04263   ACGTGCTGCTCGATC         CGGGAGCACCC TGAT GGTTGCCCGCG          TCTTCCACGTACAAT  45 12
   trd_A0786 NONE
         lgt  771578 ..  771594 +  -6.5  -3.31461   CCTCCTGCACCGCCG              GATGCTC GAG GAGCACC              TTCTCCACCTCGCTC  53 308
   trd_A0791  776379 ..  776412 + -16.1  -3.65314   CGACCAGCGCGCATC     CGAGACGCCCTGGC AGGCGGA GCCAGGGCGTC-CG     TTCTTCGGAATTGGC  88 48
   trd_A0792 NONE
   trd_A0793  779597 ..  779625 + -18.2  -2.64051   TGCCAATCGTGTGGG        CGAGGAGCCGGG AGATG CCTGGCTCCTCG        TCGCTTCTCTCGTCC  85 50
   trd_A0794 NONE
   trd_A0795  781819 ..  781832 +  -2.3  -2.71364   TACCGGCGGAGTGAG               GGGCA GTGA TGCGC                TGGTTCCGCCGCTCC  38 27
   trd_A0796 NONE
   trd_A0798  784875 ..  784885 +  -2.4  -4.15044   TCGGAGACCCTCTGT                 CGGG ATT CCCA                 TTTCTTCCAGGACAC  58 258
   trd_A0799 NONE
   trd_A0800  786100 ..  786122 +  -5.4  -2.73875   CGTCCTTATAATGAC           CCGCGCTCTG CGC CATCGTGCGG           TGGTATTCCGCCCGC  45 199
        cofD NONE
   trd_A0802  787956 ..  787969 +  -4.5  -4.48987   CCGAGAGCAGACTGT               CACTC GATG GGGTG                TTTTCGTTGTGGCAC  72 45
   trd_A0803 NONE
   trd_A0804 NONE
   trd_A0805 NONE
   trd_A0806  792329 ..  792383 +  -9.2  -3.53012   CGCGACGAGAACGTT TCGGTGCACGGCCCTTGGTGGG-CA GCCGGG TGACTCACCTCCGGCCGTGTGCCGG TTTCGCGGCAGGAGC  64 88
   trd_A0807 NONE
   trd_A0809  794498 ..  794511 +  -2.3  -3.68222   ACCTCGTACGGCTCG               GCGAA CTCT TCCGC                TTCTTCCAGTTCCCA  51 98
   trd_A0810  796814 ..  796824 +  -3.2  -3.14132   TGACGCCAGGTATAG                 GTGA AGT TCGC                 TTCGTCCAGCGGGCC  44 455
   trd_A0812  799809 ..  799824 +  -2.5  -3.21695   TACCCGCAGCCCATG              CTGCT GGGCGA AGCGG               TTGAGTTGCTGCTCG  44 381
   trd_A0816  804593 ..  804626 +  -7.4  -2.80291   CCCTCTGGTGAACGA     TCGGGCGA-CGACGC ATCAG GAATCGATCGCCCGA     TGTGGTACACTCGTT  51 176
   trd_A0818 NONE
   trd_A0819  806074 ..  806105 +  -2.8  -2.63596   AGCGGAAGGAGGCTC      TCGCCCGGTGGAAC TGAA GGCCTATCTGGCGA       TCCTCTGGCGTCAGC  39 9
   trd_A0820 NONE
   trd_A0821  808376 ..  808392 +  -4.3  -3.38072   GTCGCTCTCGGTAAG              CCTGTCG CCT CGACGAG              TTGCTGTTCCGTACG  51 274
   trd_A0831 NONE
   trd_A0832  818550 ..  818588 +   -13  -2.71712   TGGCGGCTGAGCCAT   CCGCTGGTGATGCGGGCC GTG GGCTCGCACGGCGAGCGG   CTTTGAGAGGAAAGA  67 31
   trd_A0833 NONE
   trd_A0834  820457 ..  820495 +  -9.6  -2.75064   CTTGACCGATCGGTC  GCTCGCCCGGCTGGC-CG GTCGA TGCGCCAGCCGGGC-ACC  TCGTTCCCTGGGCGG  55 36
   trd_A0835  820927 ..  820960 + -18.9  -3.27022   AACGATCGTCGTGAA     CGGAGCGGGGCGC TTCCCGCT GCGCCTCGCTCCG      TTCGTCTGCGATCCA  93 40
   trd_A0837  822981 ..  823009 +  -8.2  -3.72695   GGCTTGCTCCTGCAC       GGGAG-CAGC-GCC AGG GGCAGCTGGCTCTC       TTTCCTCGGCAACGT  65 442
   trd_A0843  828101 ..  828128 + -22.8  -3.28712   AATTTGGCACAACCA        GCTCCACCGGGC AGTT GCCCGGTGGAGC         TTCTCGCGCCGCACG 100 62
   trd_A0844  829940 ..  829950 +  -6.8  -3.28684   AGACTACCCCCTCAC                 CGAG GGC CTCG                 TTGGTCTCGCTCGTT  54 377
   trd_A0847  831291 ..  831325 + -30.2  -3.53012   GGTGACCCGGCCCTC     GATCGGGGCGACTCGG AAT CCGAGTCGCCCCGATC     TTTCCCCAGGGGCAG 100 103
   trd_A0851 NONE
         dcd  835126 ..  835153 +  -5.4  -3.16492   TGTCGCGAAGGAACG        GCCGGGTGGCAG TGCG CTACCGGTCGGC         TCTTCCTCACTGTCC  49 113
   trd_A0855  838931 ..  838945 +  -4.2  -3.72576   TGTTTCGCAGCTCCG               CCGG GTGCTTA CCGG               TTTCCTGCGCGAACA  54 201
   trd_A0859  842425 ..  842437 +  -4.7  -2.76263   GATTGTCGCCACTGC                CGTGC GAC GCCCG                TAGTTGAGTCCTGCC  43 85
   trd_A0860  843445 ..  843481 + -19.4  -2.84602   TTCACATGGACAGCC    CGCGCGGCTGGCTCGT AGCGC ACGCGCCAGCCACGCG    CTTTGATCCGGTACG  95 234
   trd_A0865  846540 ..  846588 +  -3.8  -2.82635   ACGCGCTCCGCCCCG GCTGTTACCCTCAGCGCGGCAAAC GAT GTTCGTCGTGGGGAGGG-AGC-GC TGTGCTCGTCCGCAT  43 40
        argG  847939 ..  847962 +   -16  -3.33815   GCAGATACGACGAAT          C-GGGGGCGCG TCT CGCGCCCCCAG          TTCGTTGACCGCCGT  80 49
   trd_A0870 NONE
        aroE  852634 ..  852651 +    -7   -3.4252   CCATCGGGTGAGCCC             CACGAG CGGTTC CTCGTG              TTATCGTCCGTCCGG  56 30
   trd_A0872  853760 ..  853790 +  -3.3  -3.35197   TCGCGCGGATGATAG      CTGAGGACGAGCAG GTCG TTTC-CGTTCTCAG       TTCGTGTCTCTAACC  48 359
   trd_A0877 NONE
   trd_A0878 NONE
   trd_A0879  862929 ..  862973 +  -6.5  -3.14344   TCGGTGCTGGGATCG GGTCAAC--CGCACCGCTGAGC GTGG GCTC-GCGGTGCGCCGCTGGTC TTCATGCGGCACGTC  51 140
   trd_A0882  866388 ..  866402 +  -4.2  -3.50877   CGCACCCCGCTCGTC               CATCTG CAC CAGCTG               CTTTTTCTCGAGTAG  51 203
   trd_A0885  868268 ..  868278 +  -4.6  -3.53012   TCTGACTCGACCAAG                 TCCG CTG CGGG                 TTTCGCACGCCGAAC  52 396
   trd_A0887  868642 ..  868656 +  -3.4  -3.89956   TCATCGCCGAGCGCG               CAGCGT AGA GCGCGG               TTTCGTCTCTCCTGA  58 18
   trd_A0889  870214 ..  870228 +  -4.2  -3.57144   GCTCAGGTCGCTGTT               CCCC ACTGTCC GGGG               TTTCCCCCTCACCGA  51 41
   trd_A0894  876754 ..  876769 +  -4.6  -2.61116   TCCCGCTCCAGGGCC              GCCAGC ATGC GCTCGC               ACTTTTCTCTGTACA  42 348
   trd_A0898 NONE
   trd_A0901  885571 ..  885597 + -12.4  -2.73364   AACGGGGCAGTGTTA         TAATCCCGACCA AAT TAGTCGGGATTA         TGATTCCGCTCGACA  65 174
   trd_A0903  886180 ..  886204 +  -3.4  -2.78384   AACGGTCGTGAGTAT          CCGCTCTGTG AGCAA CCCGGAGCAG          TCTGGTCGCCGCACA  40 30
   trd_A0905  887398 ..  887412 +  -2.7  -3.64703   TGAAAACCCAACAGG               ACCGC CAAGC GCGGG               TTTCGGTCGAGCGGG  53 513
        pepF  891799 ..  891813 +  -7.8  -3.53012   GCTGGCAACGCACGC               CGACTC GCC GGGTCG               TTTAGCGGCGCGCGG  60 91
   trd_A0912  894375 ..  894392 +  -2.7  -3.35542   GACGGAGTTCGCCGA             GC-AGCTG ATC CAGTTCGC             GTTTTTCCGCCTGAA  48 341
   trd_A0914 NONE
         gmd  896862 ..  896878 +    -3  -3.52102   GTCCACGGCTACAGC             T-CCGTG CAAC CACGGCA              TTCTGTCCATGAAGT  49 191
   trd_A0917  898965 ..  898976 +  -5.8  -4.62336   TTGTTTGTATGGCAG                CAGC AGAC GCTG                 TTTTTCCCGTGACAT  77 64
   trd_A0919 NONE
   trd_A0920  901011 ..  901023 +  -3.3  -2.89564   CGGACCCATGGACTA                CCTGG AGG TCGGG                TATGTCGACTGAGAC  41 1
   trd_A0921 NONE
   trd_A0922 NONE
   trd_A0923 NONE
   trd_A0924 NONE
   trd_A0925  904474 ..  904501 +  -9.2  -3.72576   GCAAGACTGCTGTCA        GGAC-GCGTCG ATCATTC CGACGCTGTCC        TTTACTACCCCGAGG  68 235
   trd_A0926 NONE
   trd_A0927 NONE
   trd_A0928 NONE
   trd_A0929 NONE
   trd_A0930 NONE
   trd_A0931 NONE
   trd_A0932 NONE
   trd_A0933 NONE
   trd_A0934 NONE
        hpaD  915173 ..  915212 + -15.6  -2.87132   CACAACCTCCCTCAC  CGGGGAGGGCGGCTCGCC GTGA GGCGAGCCACCCTCTCGA   TATGTCAAAACGGCA  76 44
   trd_A0937 NONE
   trd_A0936  915163 ..  915180 -  -8.4  -3.32844   CCTTTGACTTCACAA             CCTCCC TCACCG GGGAGG              GCGGCTCGCCGTGAG  58 62
   trd_A0918  898772 ..  898791 -  -3.5   -4.4009   TTCCATTGGAGAAAA            TCCGGTT CAACGC AGCCGGA             TACGTGAAGGCGGGG  68 301
   trd_A0916  896925 ..  896961 -  -9.3  -3.06796   TGGTAGGCGACGCAA    CCTGCACTGCGAGACGA GGC TCAACGCGCAGAACAGG    ACGTCTCCTTTCTGA  57 56
   trd_A0913  894010 ..  894043 -  -5.9  -2.85351   GTGGCCCATACGATA     CCGAT-CCGACGGCGC CAG GCACGGCCGGCATCGT     CCCCCTAAAGGAGTG  48 67
   trd_A0911  893247 ..  893261 -  -3.4  -3.96216   GGTTTAGCCAAAGAA               CGCCCG TAT CGACCG               TCCTGAGCCTACCGC  58 79
   trd_A0910 NONE
   trd_A0909  891428 ..  891457 -  -5.6  -3.21416   GAGGTGGACGAGGAA       GTGCGGCACGAG TGGAGT CGGGTACCGCAC        TTCTATCGCGCGTTC  49 383
   trd_A0907 NONE
   trd_A0906  887771 ..  887800 - -19.3  -3.44672   GTCGACCAAAACAGA       GCGGTCCCGGGCG GAAG CACCCAGGACCGC        CAGTGCCGAGAGACC 100 53
   trd_A0904  886779 ..  886798 -  -3.4  -3.61517   ATGCGCTGGCAAGAA            CTCGCCGC ATTG GCCGCCAG             CAGTCAGCGCGCTGA  49 132
   trd_A0902  885574 ..  885594 - -11.9  -3.31144   GGGGCAGTGTTATAA            TCCCGACCA AAT TAGTCGGGA            TTATGATTCCGCTCG  68 95
        cofG  882585 ..  882610 -  -3.3  -2.55015   AGTTCATGCAAGGCA         GGAGTC-TCGTG CAT CACCACAACTCC         TTTTCCCGGGGAACC  39 13
        cofH NONE
   trd_A0897  878348 ..  878374 -  -3.7  -2.87132   GCTGCGCGCGAGATA        TTCGTCGA-CGA GCAG CCGATCGACGGA         ACGTATCATCCGCTG  43 272
   trd_A0896 NONE
   trd_A0895  875943 ..  875967 - -10.7  -3.65827   CAAGCTGTACGCAAA         GCGGCG-GGC TTCCGT GCCTCGCCGC          GCCAGATTATCCCCG  73 520
   trd_A0893  875065 ..  875104 -  -2.1  -4.08767   CCCAGCTGCGGAAAA GCCCGCCGCACCAGAAC-CG GCT CGCGTCCTCG-GCT-CGGGC ACAGACGCCCGCGAG  58 355
   trd_A0892 NONE
   trd_A0891  872836 ..  872848 -  -4.7  -2.61727   ACTCAGCAGAAGCGA                GCCGG CTG CGGGC                AGCGAACTTCTACCA  42 73
   trd_A0890 NONE
        ftsH  870097 ..  870120 -  -5.9  -2.52516   GCTGGTAGCATCAAG          CACCTGCTC TTTTTC GAGCGGGCG           AATCACGTCGCCTTC  45 87
   trd_A0886  867910 ..  867932 -  -5.4  -4.28361   TGAAGGCCAGCAAAA           TCTGGCGAGG CAG CCCGGCCAGT           GCCGAGAAGCCAGGG  69 49
   trd_A0884  867193 ..  867213 -  -6.7  -3.40403   GGCTCGGCAGCAGAA            GCGACTGCC AGC GGCCGTGGC            AGGTGCGATGCTCGG  56 162
   trd_A0883  866089 ..  866115 -  -7.8  -3.14211   ATTGCCTGGCAGGAA         CCGCCCTCGCCG CCG CAGCGTGGGCCA         TCGTCCCGCGGCTCC  54 172
   trd_A0881 NONE
   trd_A0880  863026 ..  863049 -  -8.8  -3.46602   TCGCGGACAGGAGAA          GGGAACCAAG CGTC CTAGGCTCCC           GGCAGGACCGTGAGC  60 16
   trd_A0876  858383 ..  858412 -  -4.9  -3.78775   GCCCGCAGGAGGAAA       CCGGGCAATGGTC GAGC GATCATCGCTCGA        CAAAAACGTTCGACA  58 168
   trd_A0875 NONE
        yhbH NONE
   trd_A0873  853549 ..  853599 -  -6.1  -3.05463   ACCCCGCGCACCGAA CT-GCGTCCATCGTCTACCCGAGCC CAG GGCTGGGGAAAACGAGCG-CGCTAG TGAGCCGTCGTGTCC  49 152
        miaA  849636 ..  849667 -   -26  -4.26903   TGCAGCCGACGAAAA      CACGGAAGCGGCCC AGCT GGGCCGCTTCCGTG       CCTCCTCCTCACGCG 100 34
   trd_A0868  848338 ..  848369 -  -2.2  -3.14878   TTCTGCAATCGAACA      CGCTCGACGATGATC CGT GCTCATC-CCGCACG      CCTGTCGCACCGTGC  42 101
   trd_A0867  847931 ..  847969 -   -21  -2.87132   CTGCTCGGGCAGATA   CGACGAATCGGGGGCGCG TCT CGCGCCCCCAGTTCGTTG   ACCGCCGTCATGTGT 100 51
   trd_A0864  846283 ..  846304 -  -5.7  -3.05463   ATCTTCCCCAGCGAA           CGCACAGTG CCGA CTCCGCGCG            ATCTGATCGCTCTGG  47 221
   trd_A0863  846146 ..  846163 -  -5.5   -2.6648   AAAACGAATACTAAC             CATAGCG TGCC CGCCACG              TTTGCCGAACCGTCC  44 3
   trd_A0862 NONE
        wbbL  843203 ..  843218 -  -2.5  -3.08679   CTGGGCGATCGAACA              GACCC GCGATG AGGTC               GACCAGGCCCTCGAG  42 47
   trd_A0858  842236 ..  842259 -    -3  -3.09784   CTACGCGGAAGAAAT          CGACCCTCGC ACCG GCGAGCATCT           CGGGAACTTCCCGCA  44 128
   trd_A0857 NONE
        proC  838375 ..  838402 -  -9.8  -3.29511   TTCACCTGGGGAGAA        CTCCTGCTCGCG GTCA CGCAAGCGGAAG         GCGAGCCAGCCAGCG  63 384
       dehII NONE
   trd_A0853  834692 ..  834713 -  -8.7  -3.76402   ACGTGACCGAGGAAA           CCGATCACC GCGA GGTGACCGA            ATTGGTGACCGTGGA  68 492
   trd_A0850 NONE
   trd_A0849  832048 ..  832073 -  -8.9  -2.62616   GGATCCCGTACAGGA         CTCTCCCGCGAG ACC CCCGCGGG-GCG         ACTCTTCGCTCGGTC  52 298
   trd_A0848  831761 ..  831779 -  -3.1   -3.7398   TCGGAACGCAAAACA            GCCGCTGT GGTG AC-GCAGC             TCGATTGGTCGGGTT  53 117
   trd_A0846  829892 ..  829911 -  -2.8  -3.78778   CCACCATATTAAGAA            CGCGAGACG CTC CACCTC-CG            GTCTCCTCGCGCGAG  56 83
   trd_A0845  829325 ..  829347 -  -4.6  -3.54543   AGTGACGTGGTCAAA           GCGCTCGCGC TCG GTGCCCGCGC           CGTCTTGATCGGCCG  52 435
   trd_A0842 NONE
   trd_A0841 NONE
   trd_A0840 NONE
   trd_A0839  823397 ..  823417 -  -3.9  -2.84325   TCCGGCCAAAGACCA            CGGTACTGG TTT CCAGTACAT            CTCTGCCGCACCACG  43 157
   trd_A0838  822434 ..  822454 - -10.4  -2.82933   TGGGAATTCACCAGA            GAGCGGCC ACCGG AGCCGCTC            GGCCGGTCGTCTCGA  59 210
   trd_A0836  820917 ..  820971 - -12.1  -2.70932   TGGTGCGCTGAACGA TCGTCG-TGAACGGAGCGGGGCGC TTCCCGCT GCGCCTCGCTCCGTTCGTCTGCGA TCCAGCGCGAGTGAG  65 140
   trd_A0830  817321 ..  817343 -  -6.2  -3.03124   CTCGAGTCGGTAACA           TTGCACGACA CCA CGTCGCGCAC           CCCGCCCACCTCGAG  49 144
   trd_A0829 NONE
   trd_A0828  813535 ..  813551 -    -5   -2.8194   CAATGACCGACCACA              GCGCCG CCCGC CGGCGA              GCCAACTGAACCACC  44 51
   trd_A0827 NONE
   trd_A0826  810514 ..  810545 - -15.2  -3.27475   TCTCCGAGCACAACA      GAGCCGTCCGGAAA GCAC CTCCCGAACGGCTC       CATCCCGTCACATCC  78 178
   trd_A0825 NONE
   trd_A0824  809492 ..  809505 -  -8.1  -3.21747   GGATCCGACCATCAA               CTGGC CGTC GCCAG                CTCGAATCGCGGCCG  56 8
   trd_A0823  808989 ..  809001 -  -4.7  -3.60627   TCAGGTCACCGTAAA                TCGGC ATT GCCGC                CCGCCTCGTAGCCGA  52 3
   trd_A0822  808166 ..  808183 -  -5.5  -3.09273   CTCGGTGAAGAGAGA             CGGCAGA CCGA TCTTCCG              GGGTGCTCACTCCGT  49 145
   trd_A0817  804198 ..  804214 -  -6.5  -2.71322   TCAAGGGAGAGATGA              GCGTCGT CGG ACCACGC              CCCCCGGTCCCGGAA  47 358
   trd_A0815 NONE
   trd_A0814 NONE
   trd_A0813  799476 ..  799501 -  -4.5  -2.66634   GAGGCCACCAGACCA         GCGAGGGGCGA TCGA CCGCACGCCGC          AGTCCTGGCTGACCC  42 48
   trd_A0811  796527 ..  796539 -  -4.8  -3.09516   TGCGCGATCACCGAA                GTGG CTGAT CCAC                CATCCTCACCTGGCT  47 77
   trd_A0808  793998 ..  794009 -  -3.6  -3.01791   AGCTCCCCGTCAACA                CGAC CGCT GCCG                 CGTTTCTGCCCGGCG  44 435
   trd_A0797  784510 ..  784520 -  -2.4  -3.16564   CCGCTACCCCACGAA                 CCCG CTC CGCG                 CCAAGGACATGCTGC  42 110
   trd_A0790 NONE
   trd_A0789  773094 ..  773104 -  -4.6  -2.89564   GGCTGACTCGACATA                 CCCG TGG CGGA                 CGTATTGCCGATTAC  44 143
   trd_A0788  770863 ..  770873 -  -2.4  -3.14132   CGGCTGCCTCATCAA                 CGGC GAT GCCT                 GGGGCGGCCCCTGCA  42 452
   trd_A0781  764724 ..  764749 -  -3.3  -3.18054   TTGCAGAACGCAAGA         CAGTCGTTCCAC AAT GCCGAACGA-TG         CAGCCACGCGTCTGC  44 106
   trd_A0780 NONE
        ppsA  761360 ..  761371 -  -5.8  -3.14132   CGCGCCCTCGACGAA                CTCG TGAT CGAG                 GGGATCGCGACCACC  49 369
   trd_A0777  759050 ..  759060 -  -2.4  -3.28712   TCCCCTCGCTCAGAA                 CCCG GCC CGCG                 CGGCGGCAGCCTCGA  44 9
   trd_A0776 NONE
   trd_A0775  756143 ..  756157 -  -2.8  -4.08767   TCCATGTGCCGAAAA               CGAG ACGCGTG CTCG               ATCGTCACCTCCTCA  59 38
   trd_A0774 NONE
   trd_A0773 NONE
   trd_A0772 NONE
   trd_A0771 NONE
   trd_A0770 NONE
   trd_A0769 NONE
   trd_A0768  749120 ..  749134 -  -4.2  -3.51232   CCTTCCCTAAACGAA               CCGATC AGC GATCGC               CGAAACTCAGGCGGT  51 32
   trd_A0767  748433 ..  748467 - -15.8   -4.7373   GCACTGCACCAAAAA    CGA-GGCCGGCCCGCC GCACA GG-GGGCCGGCCATCG    CGGAAGAGGGTAACG 100 44
   trd_A0763  744653 ..  744684 -  -7.2  -3.02144   CGACCGTCGTCAACA      GGCCACGCCCCT GTTTCCGT AGGAGCGCGGCG       CGCCTCGCCCGCCCG  51 482
   trd_A0755  741843 ..  741855 -  -3.3  -4.07568   CCCGGTTGGCCAAAA                GCGGA TCG TCCGA                CCGACTCCCATCGAC  59 87
   trd_A0753  739421 ..  739458 - -19.9  -3.64703   CGTCTGCGACCGAAA   GCAGCGGGTGCCCTGAT CGAA ACCGGAGCACCCGCTGC    GACGGGAGGGAGAGG 100 46
   trd_A0751  738313 ..  738323 -  -6.8   -2.5194   GAATCAGTGAGCAAC                 TCCG GAC CGGA                 TTGCGTGAACTGGCC  47 322
   trd_A0747 NONE
   trd_A0746 NONE
   trd_A0745  733198 ..  733252 -  -2.7  -3.73534   GAACCTGATCAACAA TGTACCGATGGCCCTGGTCATGC-GCG CGG CGCTGGA-GACCAGTGCCCCCGCCACG CTCCCCCAGGAGGCG  53 243
   trd_A0743 NONE
   trd_A0742 NONE
   trd_A0741  730409 ..  730439 -  -5.3  -2.54896   GTGGGATCGAACCGA      CGGCTGCGACAGGC TCGT GCGCGTCGCC-CCG       CTCGCGCCCTCCCTC  44 53
   trd_A0740  729105 ..  729119 -  -2.8  -3.72576   GCGCCCTCGACGAAA               TGGG GATCCGA CCCA               CTCCCAGCTGACCGG  53 52
   trd_A0736  726648 ..  726660 -  -4.7  -3.01791   AGCGCTCCTCGAACA                GCGCG GCC CGCTC                GGTCGGCTCCTCCAG  45 175
   trd_A0731  722200 ..  722221 -  -7.9  -3.12999   GGACGCGATACGGAA           CCGGCCCCA CCGC CGGGACCAG            CGCCATCCCCGTCAC  54 289
   trd_A0729 NONE
   trd_A0728  718062 ..  718090 -  -8.8  -2.71364   GCATCTGCGCAACCA       CGGCTGGCGGACC TACT GGCGC-CCAGCCG        AGCCGCCATGGGCCG  52 9
   trd_A0727  715860 ..  715883 -  -5.2  -3.34192   AAGCGGTGGAAGGAA          GCGCTC-GCCG TCT CGCCCGAGCAC          GCCCCGTCCGCCGAG  51 97
   trd_A0726  715602 ..  715634 -    -9  -2.70932   GGGTCCTCGCAACGA      CGGCTCCCTCCCGA GAGGT TCGGCAGGGCGACG      CCGCGAACCAGCACA  55 122
   trd_A0725 NONE
   trd_A0724 NONE
   trd_A0723  714479 ..  714510 -  -2.9  -2.82516   CCGGCCACTAGGATA      CGCAACGCCCG CTACACCCGC CGGCCGCTACG       CTGCCTCCTGCTCCG  41 51
   trd_A0722  713653 ..  713665 -  -4.1  -3.01712   CGCGTTGCCTGAATA                CCTAA ATA TCAGG                CGACGCATCGAGTAT  44 47
   trd_A0721  713272 ..  713287 -  -4.7  -2.56715   AGTCGGAGCAACGGA              TCGAC CCCGGT GTCGA               GATGCGGTGGCTGTG  42 111
   trd_A0720  712350 ..  712363 -  -2.3  -2.62983   TCGAGCCCGAGAGTA               TCGCG CAGT CGAGA                GGTGTTCGGAATCCC  38 503
   trd_A0719  709695 ..  709728 -  -8.1  -3.21416   GATGGGGAGCAGGAA     GCGTCCACCCGGGC TGGCTGT ACCCGAGCGG-CGC     CACGCCTTGTGGGGC  54 45
   trd_A0718  708940 ..  708950 -  -6.8   -3.4252   GCTCATTGATGAGAA                 CCTG ATT CAGG                 GCGCGATCCCTCCCG  56 503
   trd_A0716  706596 ..  706612 -  -7.9   -3.2794   CTCGATCGAGATGAA              GCGCGAG TCG CTCGAGC              AATACCGCTGGCCAG  56 486
   trd_A0714  704851 ..  704867 -  -2.2  -4.81249   GCCGAAAGTGAAAAA             CCCG-GC AATC GCTCGGA              CTGGTCGACCCCTGC  74 247
        murQ NONE
   trd_A0712  702926 ..  702982 - -12.2  -2.62616   CCACGCGGCACAGCA CCCAGGCGACCGGCGCAGCGCAGGTAGG ACG CCGAGC-GCGCTGCGCCGGTC-CTCACG CTCTGGCGTGCAACT  64 21
   trd_A0703  692873 ..  692906 - -20.3  -2.94232   GGCGTGGGAAACAAT     CCGCTGCGCTCCTCG TCGT CAAGGAGCGCGGCGG      CTACGGCGGCTACAC 100 496
   trd_A0698  688491 ..  688506 -  -5.4  -3.44146   GCCTGGGAGAACGAA              GGACGCA ATC TGCG-CC              TCGTCCAGCGCTGGT  53 136
         upp NONE
   trd_A0692 NONE
   trd_A0691  679010 ..  679025 -  -4.6  -2.70932   CCCTGGTGGGAACGA              CGGGAC GCTC GTCCCT               CAGTCGCGCCCGGAC  43 25
   trd_A0690  678130 ..  678151 -  -2.2  -2.78596   CACCTTTGGATGACA           GCGCT-GTC ATCCG GCCGAGCGC           TCCCTCCACTCGGCT  38 44
   trd_A0689 NONE
   trd_A0688  676682 ..  676704 -  -4.1  -3.18239   GACACAGCGTACCAA          CCGCTCGCCG ACCC CGGC-AACGA           TCAAGGACTTGCGTC  45 26
   trd_A0687 NONE
   trd_A0686  674879 ..  674914 -  -5.2  -3.33815   ACCTCTCCGAACGAA    CGCGTCTCATCTGCAGG AGC CCAGCCGA-GCGCCGCG    CCTCCCTCACGGTCC  51 347
   trd_A0685  674529 ..  674540 -  -2.2  -2.71712   GCCGGTCTCGTAAAG                CG-GC TCC GCTCG                GCTCGCACACGTCCG  38 41
   trd_A0684  674264 ..  674285 -  -7.3  -3.16742   CGGAAGCCCGACGAA           GACGATCGA CCAG TCCATCGTC            GTCACCTCCTTCCCG  52 27
   trd_A0683  673861 ..  673877 -  -4.4  -3.40403   TCCTGGGTACGAGAA             CGTCTGG GTCG CCAG-CG              GGCACGCCCGGCACG  51 157
   trd_A0681  671612 ..  671636 - -12.1  -2.79183   CGCATGTCGAGTATA          GCTCGCGCGAA CTC CTCGCGCCAGC          CGAACGCTCGGTCGC  65 127
   trd_A0680  670949 ..  670985 -  -6.5  -3.30771   TGACACGCGCGAGAA    CGAGATCCAGGACGT GTTCACG ACGACCTGAGCCTCG    ACCGGCTGCAAGAGA  53 79
   trd_A0678  669365 ..  669385 -    -4  -2.91264   CTCCCCAGCTAGACA            TCGAACGA CCATC TCGTCCAA            CTTCGACTGGCCGCT  43 144
   trd_A0677  668751 ..  668786 - -15.4  -2.83271   TGATCGTCACAATGA    GCGACCCCCGCCGG-GT CTC ACTCCCGCGGGGGTCGG    CGACGACTGTCCGCG  76 46
   trd_A0675  666206 ..  666226 -  -3.2  -3.30441   GACGATTGGCGAGAA           CTC-GCGCG TCGG CTCGCTGAG            GAGCCGTGAACCGTC  46 39
   trd_A0667  659032 ..  659056 -  -6.4  -3.10905   GGAGAACCCACCGAA         CTCGCATCGGC GATC GCCGATGCC-G          TCGTCGCCTTGCTGT  51 105
   trd_A0663  653106 ..  653145 - -12.2  -3.02144   GCAGCTCTCGGAAGA  GGAGGCCGAGGACG GTACGAGGGATG AGTCCTCGGCCTCC   CACGAGGCGATGAGC  67 50
   trd_A0659  649316 ..  649330 -  -9.2  -3.21099   CCTCCTGACCAGCAA               CCGCGA CGG CCGCGG               TAACCCGCGTGCCGG  59 239
   trd_A0656 NONE
   trd_A0655 NONE
   trd_A0654  645135 ..  645173 -  -5.9  -3.43618   AAGCAATAGCCAGAA  CGCTCCGCACAC-CGC CACCACAC GCGAGGGCGCCGAGCG   GCCTGAGTCCGCTCG  55 176
        flgC NONE
        fliE NONE
        fliF NONE
        fliG NONE
   trd_A0649 NONE
        fliI NONE
        fliJ NONE
   trd_A0646 NONE
        flgB NONE
   trd_A0644 NONE
        flgD NONE
   trd_A0642  634258 ..  634301 -  -5.9  -2.83164   CGACGCATCACCAGA GGC-GCCTGCCCCGAACAGAC GCAC GTC-GCTCGCGCCCGGCTGCC CCAACATCAGCGCCG  48 32
   trd_A0641 NONE
   trd_A0640  630468 ..  630501 -  -6.6  -2.62184   GTGTGCTCGAGATGA     CCGCTCCGTC-AGCC CATCT GGCTCGCCGGCGCAG     ACACGCAGTCGATGC  46 381
   trd_A0639  629060 ..  629093 - -13.1  -2.70932   CGTCTCGCCGAACGA     CGCCACCAG-GCGGGC GGC ACCCTCTCCGGTGGCG     AGCAACAGATGCTCG  67 322
   trd_A0633  623438 ..  623452 -    -7  -3.53091   ACTCTCGTTTTCAAA               CCCGGC ATC GCCGCG               CGCTCCGCGGCGTGT  58 79
   trd_A0631  623140 ..  623170 -  -8.2  -2.73542   GCGAATGTCGAACCA       GCGTCAAGACCTCG CAG CGATGTCTTGCCTC       ACCCACTCGATCGCC  52 99
   trd_A0630 NONE
   trd_A0629  621265 ..  621280 -  -3.2  -3.17075   GCCCCCTCAACTCAA              CGGG ATATCTTG CCCG               GCCTCGACCCAGAGT  44 1
   trd_A0628  618077 ..  618087 -  -8.2  -2.70143   AGTGGAACCACATCA                 CGGC TGA GCCG                 GCTCGCACCATCGCC  52 265
   trd_A0626 NONE
   trd_A0625 NONE
   trd_A0624  613282 ..  613308 -  -7.8  -3.71873   TCACGTACATCGAAA         TCGAGCGGGTCG CCG CGGCCCGGTCGC         TCCGCACGGTGACGG  63 282
        pyrD  611879 ..  611902 -  -4.4  -3.75153   GCGCGCGAACGGAAA          CGCGCTCAAC GCCC GCGGAGCGCC           CGTACCGACGGCAGC  55 7
   trd_A0620  609671 ..  609684 -  -2.3  -3.00923   GCTCAACATCACATA               GATCG GCAT CGCTC                CGTCCTCCTTTCATT  41 36
   trd_A0619  609159 ..  609181 -  -7.7  -2.68823   CGCCGGTGAGAGAAC          GCGC-GACCG CACC CGATCTGCGC           TGCAGTCCGTGCCGC  51 215
   trd_A0614 NONE
   trd_A0613  603454 ..  603484 -  -5.2  -3.05596   CAGCTCGCTAGCCAA       GCTGACTCGCAGCG ACG CGCCGTGGTCCAGC       TCCTCGCCCAGCGCG  47 371
   trd_A0608 NONE
   trd_A0607  598158 ..  598190 -  -3.4  -3.33671   AGATCCAGCTGAGAA     TCTCCTGAG-AATCG TCGG CGACTACGCGGGAGA      CACGAGGCTTGGCGC  46 14
   trd_A0606  596875 ..  596895 -  -6.1  -3.04196   CGAAACCTACATATA            CTAGCACAC ACC GTACGCCAG            CGTCAAGGTCATCCC  49 34
   trd_A0605  595734 ..  595776 - -19.2  -3.10894   ACGATCACGACTGAA CGAATCGGGCCGGACTCCC TTTTTC GGGAGACCGGCCCG-CTCG ACGTCGAGAGATCGT 100 46
   trd_A0600  591408 ..  591435 -  -8.5  -3.06501   GAGAGGGTCACGCAA       GCC-GGTAGCGAG CGTT CTCGC-ACCAGGC        GCGAGACTCGAGCCG  55 175
   trd_A0597  586607 ..  586625 - -10.2  -3.55444   GGTGGATCCCCCAAA             TCCGGTCG GGA CGTCCGGA             GGTGATGACGCAACG  67 389
   trd_A0595  586044 ..  586060 -  -4.4  -3.06796   TGTGAGCGGATCGAA              GACGAT GCACG ATCGCC              GCGAGACCACGCGCT  45 63
   trd_A0594 NONE
   trd_A0593  583830 ..  583854 - -20.7  -3.53012   CCTGCCTTCGGGAAA          GGGGCCGGGAG AGC CCCCCGGCCCC          TTCGTTTGAGCGTCA 100 38
   trd_A0592 NONE
   trd_A0591 NONE
   trd_A0590 NONE
   trd_A0589 NONE
   trd_A0588 NONE
   trd_A0587  578169 ..  578183 -  -3.5  -2.78596   CACCGCTCCAGCACA               CTCCC CTGCT GGAAG               AGCAGGAACTCCATC  41 93
   trd_A0586  577999 ..  578024 -  -4.6  -2.78679   GTCGGCTATGGAAAG         CGACGACGCG CGCAGC CACGCCCTCG          TTCCGCAATATGGTC  43 39
   trd_A0585  577449 ..  577473 -  -2.7  -4.42806   CTATCCGCAAAGAAA          GTGGTCAGC TCGCCTG GCTGCCCCC          TGGACACGCGGCACG  66 279
   trd_A0583  576437 ..  576459 -    -7  -3.10112   ACGCAATGCATGCAA          CGC-CGGAG GAGGCA CTCCGCGCG           GGACTCGCGCACCTG  52 442
   trd_A0581 NONE
   trd_A0580  573081 ..  573115 -  -7.2  -3.05384   GCGGTCGCCAGCCAA    GGACC-GCCACGACGA ACTCA TCGCC-TGGCCGGCCC    AAGATCGTTGGCCGC  51 375
   trd_A0577  572456 ..  572472 -  -7.3  -2.63631   TCAACTGGTAGAGCA              GCTGACT CTT AATCAGC              GGGTTGGGGGTTCGA  47 21
   trd_A0575 NONE
   trd_A0574  567677 ..  567700 -  -8.8  -3.34043   CTCATCACCGCAGAA          GGCGCCGAGCG GCT CACCC-GCGCC          CCGCACGAACTCCTT  58 61
   trd_A0570 NONE
   trd_A0569 NONE
   trd_A0568  562819 ..  562855 -  -2.8  -2.82623   CGCTGTCGAGAACCA    CGAGGGATATGTCGTG AGGAG CGCGTCAGACCCCTCT    CCGTCGGCTCGCCTC  41 14
   trd_A0567  560711 ..  560749 - -21.2  -3.25823   TCTCCTGGAGAGGAA  CCCTCCGATCGG-AGGG TGTTCG CCCTTCCGATCGGAGGG   GTGTCTTGGCATGCT 100 92
   trd_A0566 NONE
   trd_A0565 NONE
   trd_A0564 NONE
   trd_A0563  555641 ..  555660 -  -6.4  -2.62184   CGCTCGCCGAGACGA            CGGCACGGC GAG GCC-TGCCA            GCTCCCTCGCTCGCC  46 65
        acnA NONE
   trd_A0561  549606 ..  549618 -  -3.3  -3.02471   GTTCGACTACACACA                GGAGA GAT TCACC                TCGACACTCGCGACT  42 182
   trd_A0559  548307 ..  548357 -  -3.4  -3.21747   TCACTTGATGAGCAA GCAGCGCAGTGACTGGTCGCTCCC GTTTCTT GGG-GCGATC-GCCA--GCGCTGC CGCTGATACCTGGGC  46 428
   trd_A0556  547094 ..  547120 - -13.1  -3.08679   CTTTCCGAGTCAACA        GCCACCGA-GGT GCCG ACCGTCGGTGGC         TCGCGTTTGCGATGC  72 505
   trd_A0554 NONE
   trd_A0553  545782 ..  545794 -  -3.3  -4.94902   GAAGGATGAGAAAAA                CGGTC GCC GACCC                TCTGCTCGTTCAGGC  77 35
   trd_A0549 NONE
        cofE NONE
   trd_A0547  542528 ..  542562 - -16.5  -4.15044   GCTGCCGGGAAGAAA     GCGGAAGGGCCGG GCTTCTCCT CCGACCCTTCCGC     TCTCCGAGCCTGTCG  95 49
   trd_A0545  540056 ..  540071 -  -2.4  -3.05844   CGCTGCACTTCAACA              GCGACC CCTG GGCCGA               GCACGTGACGCGGTT  41 271
   trd_A0542  537835 ..  537866 -   -16  -2.60212   CGATCACTCCAGAAC      CCGAGATCGTCGTGC CCT GCACGA-GACCTCGG      TCCGTCGTCAACACC  74 251
   trd_A0541  532655 ..  532683 - -15.3  -3.66908   TGGTGGGAAAAGCAA        GAACCCCTGAGGA TGT CCCTCGGGGGTTC        TTATCGTGGTAGCGG  85 501
   trd_A0535  528352 ..  528372 - -11.2  -3.32844   GTGGCCACCGGAGAA            TCCCGACT TCGTC AGTCGGGA            TTCATTCTGCGCGAT  66 79
   trd_A0534 NONE
   trd_A0533 NONE
   trd_A0532  524206 ..  524224 -  -2.2  -2.87026   TATACGCATAGCAGA             CGGGCAGC ATT GCCTCTCG             CAGAATCGGTGCGCC  40 137
   trd_A0530  523325 ..  523351 -  -2.9  -3.22298   TTGACCGACCAGCAA        CTCCCGGACACG ATCG CG-GTCGGGCAG         GTGACGCCGGAACCG  46 341
        recA  520970 ..  520980 -  -3.2  -2.62983   TGGAGCCGGATACCA                 CTCG CAT CGAA                 CCAGACTCCCCGCTC  39 84
   trd_A0526 NONE
   trd_A0525  516625 ..  516653 -  -4.4  -2.86271   GGCTGACGAGAACGA       CCTGCCGCCCGAG CTCG CACGGTCAGC-GG        AAATCGTGCGAGAGG  44 19
   trd_A0523  515571 ..  515596 -  -2.4  -3.28924   CACGCTGGCGGAGAA         GGGGGACGCAC GCGGA GAGCG-CCCGC         GAGCATCGTTGAGGC  44 76
   trd_A0522 NONE
   trd_A0521  513762 ..  513774 -  -4.8  -2.98823   TCGGTGGGACATACA                GCAC CTCCT GTGC                GATGCAGCTGGTCTA  45 140
   trd_A0520  511954 ..  511977 -   -11  -3.27498   GACACGGCACAGGAA          CTCGCCGATC GCCT GATCCGCGAG           GGTGCACCCGCACTC  66 412
   trd_A0518 NONE
   trd_A0517  509833 ..  509856 -  -3.8  -3.61398   CTTCGCTGGGAACAA          TCTGGCGG GAGCGGCA CCGGCAGA           TTCCGATGCTGTCGC  51 421
   trd_A0511  501315 ..  501365 - -21.9  -3.03441   GACTACCCGGGAAGA GC-GCGTGGGCTGGACCGGGCGAA CTGG TACGATCGGTCCAGCCCACGCAGC GGGTCTCTCACCCGG 100 42
   trd_A0509 NONE
   trd_A0508  499410 ..  499429 -  -3.4  -3.62597   GCGATCCTGGAAGAA            GGTCGCCG GCGA CGGGGAAC             AGGCTCGAAGTTGTT  53 51
   trd_A0502  491575 ..  491587 -  -7.7  -3.12606   GTACAGACGACGCAA                GTTCC GGT GGAAC                ACCAGGACGGTTGCG  54 383
   trd_A0499  490255 ..  490267 -  -6.3  -2.74563   TCGAGAGGCGAACCA                GATCA GGC TGATC                CCGGCATGTAAGGCC  47 115
   trd_A0498  489556 ..  489566 -  -2.4  -3.18582   CAGCTCACTGATCAA                 GGCG GGG CGCA                 GTCAGCGGAGGACCG  42 27
   trd_A0497  487566 ..  487587 -  -7.9  -4.22678   GACAGGCAACAGAAA           GCCG-GCTCG TCG CGCGCTCGGC           CGGGTCGATCGCGCT  74 506
   trd_A0495 NONE
   trd_A0494  484178 ..  484194 -  -2.1  -4.49337   GCACAAGCCACAAAA              CCGCCAG TCG CTGCAGG              AAAGTTGCCCGGGCG  67 125
   trd_A0492  482083 ..  482125 -  -4.1   -4.4261   GGTCGAAGAGGAAAA TCCCGGTCGCGAACATGGCGC TGA GCG-CACGG-CGCAACCACGA GCGTCGGGTGGGCCC  68 204
   trd_A0491 NONE
   trd_A0490  479347 ..  479368 - -11.5  -3.03771   CCAGAGTGCGGAACA           CCCGCTGGC CAAG GCGAGCGGG            ACGAGCCAGAGAGTC  65 39
   trd_A0489 NONE
   trd_A0488 NONE
   trd_A0487  476315 ..  476371 -  -8.1  -3.14132   CGCTCGCGCGACGAA CCCGCCC-GTGCA-CGGAGA-CGGCG CACTCGCT CGCCGGTCTCCGACGAACCGAACGGG CGACCGAGCCGACCT  54 313
        lpdA NONE
   trd_A0485 NONE
   trd_A0484 NONE
        manA  471546 ..  471557 -  -5.8  -3.54424   CGTGATCGTGCGAAA                GCGT ATCG ACGC                 ACCAGAGTTTTGTAC  54 294
   trd_A0481 NONE
   trd_A0480 NONE
   trd_A0479  465869 ..  465889 -  -4.7  -2.78384   GCCGGGTGGAGCACA           CCGCT-CG TACTCG CGCAGCGG            ATGCTCCTCAGAGAG  43 42
   trd_A0478  464973 ..  464993 -  -3.8  -2.62184   TTCGGCCGCAGAGGA            CCGGAGCG GTTCT CGTGCCGG            GAAGGAGCGTCGGCA  40 258
   trd_A0476  464493 ..  464508 -  -3.9  -3.30124   CGGCACGCTGGAGAA              CCCGG TGATCG CCGAG               GAGTGAGTTGGCGAG  47 96
   trd_A0474  461495 ..  461514 -  -5.7  -3.17051   CCCGGAGGACGAACA            GGCGCGTC AGGCG GA-GCGCC            TCCTTACTCCCGAGC  49 126
   trd_A0473 NONE
   trd_A0472 NONE
   trd_A0471 NONE
   trd_A0470  457504 ..  457529 -  -2.5  -2.52464   CCTTGCCGGAACGGA         TCGAGACC-GCG CGT CTCAGGTCTTGA         GCTCGCGGGCTGCTT  37 15
   trd_A0469 NONE
   trd_A0468  455575 ..  455608 -  -8.8  -2.52543   AGCTTGCGCAAGGCA     GCGACTCGTCCG CTGGACTGTT CGGACGCGCCGC      GGCGCGCCATCGGGC  51 43
   trd_A0467 NONE
   trd_A0466  454541 ..  454567 - -10.1  -2.52896   GCAGGCTCGAATCGA        CGGCC-GCACCG GTAC CGTTGCCGGCCG         CGACGCGTCTCATTC  56 35
   trd_A0464  453796 ..  453816 -  -4.6  -3.31144   CGCGGAGGCGGAGAA            CAGAGGAG TCGTT CTCCGCCG            GCGGGTCGACCAGTG  49 256
   trd_A0463 NONE
   trd_A0462 NONE
   trd_A0461  448841 ..  448857 -  -4.3  -4.62069   CTTGCAGCCCAAAAA              CCGACAC TAT GAGTCGA              TCGCGTCGCTGAGCT  75 40
   trd_A0458  445628 ..  445648 -  -8.1  -2.62983   CGCAGCGCGACAGCA            GCGGGCGCC TGA GGCGCGTGC            TCGCTTCGCCGCGAT  50 86
   trd_A0450  438082 ..  438096 -  -5.6  -3.18582   GAGCTGAGGGACGAA               CGCAAG CAC CTGGCG               CGCTCGGCCTGACGG  49 82
        mutS NONE
   trd_A0448  433246 ..  433266 -  -2.6  -2.52516   CCGCCGACCATCAAC           CTCGAGCAT CCAG AT-CCCGAG            TGCGATCTCGATTAC  37 195
   trd_A0444 NONE
         map NONE
   trd_A0434  419453 ..  419466 -  -4.5  -3.08471   GAGAAGGTGAGCGAA               CCGCGG ACG CCG-GG               CGCCTGGGTGCTGAC  47 436
   trd_A0430 NONE
   trd_A0429 NONE
         eat NONE
   trd_A0427  413383 ..  413406 -    -3  -3.09718   GAATTGGCAAAAGTA          TGCCCG-GCTG TGC CCGCTCGGTCA          AGCGGACGGTACGGT  44 23
   trd_A0426 NONE
   trd_A0425  411143 ..  411159 -  -4.3  -2.95298   GTGACGCACGAGACA              GACCGGG ACG CACGATC              TCACGGCTGAGCAGC  45 62
   trd_A0423  410667 ..  410679 -  -9.1  -3.65224   ATCCGAGGCGAAGAA                GGCGT CGC ACGCC                TGCGTAGCCGGAGCA  68 54
   trd_A0419  407780 ..  407813 -  -2.9  -2.70932   TTCCCTCCGGAACGA     CAGCGGAGCGGTCGT CATG ATGCGCGCCTCGCTG      GGCCGGTGTGCCGAG  40 291
   trd_A0414  400417 ..  400433 -  -5.7  -2.80816   GTGTCAGGCAGCACA              GGCACGC CCG GTGCGCC              TCGTCGGGACCCGGC  46 323
   trd_A0411  399783 ..  399816 -  -6.7  -2.61216   CGATCAAGCAAGGGA     TCGCAGTTACCGGATC GGT GAACCAGTA-CGGCGA     CGTGCAGGCGATCGG  47 416
   trd_A0400 NONE
   trd_A0399  387161 ..  387177 -  -9.3  -2.79183   CGGATGCCGACGACA              GGTGCCC AGT GGGCTCC              CTCAGGTGAAGAGGG  55 48
   trd_A0396  383004 ..  383024 -  -4.6  -3.28791   ACTGGCGTTGTACAA           GC-GCGGCG ATTA CGCGGCAGC            GGGAGTGCCGATGCT  49 428
   trd_A0386  370744 ..  370802 -   -11  -2.67515   GGCACGATCATAGCA TGCAGTCG-CT-CGGTCCGCGGCGGCGA GCATG TCGCCACCACGAACCGCAGCCGAGAGCG TCTACCCAGGCACGC  60 171
   trd_A0385  370202 ..  370251 -  -8.5  -2.87931   CGTAGCCCGTACAGA CGCGGCCGAGCAGCTGCTCGGCG ATGCCG CGCCGTGCCGCT--TCGACCTCG GGGAGTTCAGGCACG  54 32
   trd_A0381 NONE
        merA  364970 ..  364988 -  -3.8  -3.53012   GCTCGGCCCGGGAAA            CGACCCG AGTGGG CGGG-CG             ATGATGCGTCGCTTC  51 42
   trd_A0376  363454 ..  363482 -  -4.4  -3.08679   CCCGCTGATCGAAGA        GCGGCTCGGG CGGGCAGGT CCGGGGCCGC        TGCTCACGCGCCTGT  47 105
   trd_A0375 NONE
   trd_A0374 NONE
   trd_A0373 NONE
   trd_A0372  357771 ..  357783 -  -3.3  -3.23042   AAGATTGAGCAGGAA                CAGCG TCA CGGTG                CACCTCCGATCGATG  46 18
   trd_A0371  357317 ..  357327 -  -6.8  -3.32844   TCGCTCATCGCAGAA                 CCTC CAG GAGG                 CGAGCTTCCAGACCA  54 4
   trd_A0370 NONE
   trd_A0369  356389 ..  356432 -  -4.4  -3.63694   ATCGATGGTCAAGAA GCTGAAGCGGCAAGCTGCCA AGCG TGTCAACCAGCGGCTCAAGC AGCCCAAGCACAGTG  55 223
   trd_A0362  350480 ..  350491 -  -4.4  -3.70149   CCGAGATGAGCCAAA                GATG CCAG CATC                 GGCGAGCGGACGGCT  55 55
   trd_A0361 NONE
   trd_A0360 NONE
   trd_A0359  349134 ..  349144 -  -8.2  -3.06162   GATGGGAGCTGAACA                 GCGC GAC GCGC                 TTTACCGAGGCTGGA  55 161
   trd_A0357  346934 ..  346948 -  -5.6  -3.94404   AAGGAGGGAAGGAAA               GCGTCC GGT GGACGG               ACTTCTCGGGAAACG  63 52
   trd_A0355 NONE
   trd_A0354 NONE
   trd_A0352  342193 ..  342203 -  -6.8  -3.32844   CTCGGTATCCGAGAA                 GCAG CCA CTGC                 CCTCTCGGAGGCTGC  54 212
   trd_A0344  331999 ..  332040 - -16.6  -2.68823   CGCCGTGCACAGAAG CGGACGAGCCGGAGTGGGC GCGCT GCCCACTCCGGCTTG-CTG GGGTGCCTGGGGGAT  77 43
   trd_A0343 NONE
   trd_A0342  329669 ..  329684 -  -7.5  -2.69151   GTCTCCCAGACACTA              CGCGG TGGTCG CCGCG               CGTGCCTTCAGACGC  51 7
   trd_A0341 NONE
   trd_A0340 NONE
   trd_A0339 NONE
   trd_A0338  326539 ..  326552 -  -2.4  -2.82516   TGGCCGATCATGAGA               TCTC CTCCAC GAGA                TGTGCCACTCGCACA  40 4
   trd_A0337 NONE
   trd_A0336 NONE
   trd_A0335 NONE
   trd_A0334 NONE
   trd_A0333 NONE
   trd_A0332  320056 ..  320071 -    -4  -2.70932   CTCCTCCTCGAACCA              GGC-ATG ATT CATCGCC              ATCGGGTCAGCCACC  41 18
   trd_A0331 NONE
   trd_A0330 NONE
   trd_A0329 NONE
   trd_A0328 NONE
   trd_A0327 NONE
   trd_A0326  312686 ..  312729 - -14.5  -3.05816   GCACCGTGCACGGAA CCGGACGAGCCGGAGGGGGC GCGCT GCCCACTCCGGCTTG-CTGG GGTGCCTGGGGGATG  74 42
   trd_A0325 NONE
   trd_A0324  310490 ..  310504 -  -4.2  -2.82516   TCTTGGATCACGAGA               CGACTC CTC GACTCG               AAACGAGTGTCCATG  43 65
   trd_A0323  308569 ..  308604 - -21.2  -2.94218   ATGGCGGAGGAGAGA    GAACGAGCCCGGGGGA ATGC TGCCCCGGGCTCGCTC     GTCGAGTTCCGGATC 100 39
   trd_A0320 NONE
   trd_A0319 NONE
   trd_A0318  304145 ..  304177 -  -7.5  -4.37658   AAGCGGCGGACAAAA      GCGAAGAAGCCCCTC ACT GCGGTGCTCCCACGC      TCGTCATGCCATCTG  77 6
   trd_A0317  303146 ..  303171 -  -5.3  -2.79915   ATCGACCGGATGAGA         GCGGCG-CCGGA GTC CCCGGCCACCCC         GGCACTCTTCGCGGC  45 44
   trd_A0314  301151 ..  301165 -   -10  -3.01712   TGGTCGGTGTCAACA               CAGCGA TCA TCGCTG               GTGCGCAGGGGCTGG  60 417
   trd_A0312 NONE
   trd_A0311  298054 ..  298066 -  -4.8  -2.68823   TGTCTCGCACAGAAC                GCGA TCCCT TCGC                TCTCCGATCTGCGCA  43 64
   trd_A0310  295109 ..  295138 -  -7.2  -3.53012   GGGCTGCCGTGGAAA      CCGGAGTCG-CCCG CTTG CAGGTCGA-TCCGG       ACGATATCGCTGCGC  58 155
   trd_A0302  285910 ..  285922 -  -3.3  -2.67515   TCTATCATCATACCA                CGCTG GCT CATCG                AACGGTGCGCTGGAG  40 74
   trd_A0301 NONE
   trd_A0300  285261 ..  285279 -  -5.2  -2.64616   CCTTCACCTACAGTA             TCACCGAC GGT ATCGGTGC             GGGCTTCATCACCTG  44 164
   trd_A0296  283257 ..  283277 -  -6.8  -3.60627   GGATTTCAGCCGAAA            TCGTCTCG TTGCT CGAGACGC            TGCGGACCATGTGAG  58 218
   trd_A0293 NONE
   trd_A0292 NONE
   trd_A0291  277605 ..  277632 -  -5.4  -3.14132   GCGGTCGCGGACGAA        CGAGGCCG-ATCG TTC CGGCGCGGCCACG        GCAAGGAACCCGCGT  49 40
   trd_A0290 NONE
   trd_A0289  276382 ..  276436 -  -7.7  -2.79183   TGGATCTGGAGGAGA GCCGAGCGGGCGCAGGAC-GCGCGGTG GTT CACC-CGCCGTGCTGCAACCGAACGTC TACCACTACGGTACG  51 51
   trd_A0288  275274 ..  275287 -  -5.3  -2.53213   CAAGCGCTGAACGCA               TGACA GTTT TGTCA                CGGTCGGGCACTAGC  44 299
   trd_A0287 NONE
   trd_A0286  274199 ..  274226 -  -3.3  -2.71146   AAAAATCATGAGAAG        TGCAGCGGTGA GGAGTA TCGCCACTGCT         GTTTGGGCAGTCTTC  40 42
   trd_A0285 NONE
   trd_A0284 NONE
   trd_A0283 NONE
   trd_A0282  271629 ..  271640 -  -7.2  -5.08824   GCTGTAGCCAAAAAA                GGCG CGGT CGCC                 TCGCTGTCCTCGCGA  87 118
   trd_A0277 NONE
   trd_A0276  259997 ..  260010 -  -2.4  -3.21934   GCTCCTGCAGAAAAT               TGCA GCGGGT TGCA                CAAGTGAGGGGCCGC  44 123
   trd_A0274 NONE
   trd_A0273  256531 ..  256546 -  -2.5  -2.71712   CGCCCGTGCTGAAAC              GGTCG CTCGGC CAACC               CACTCGTCAGGAAGC  38 118
   trd_A0272 NONE
   trd_A0271  255244 ..  255270 -  -4.3  -3.40403   GCGGTGTCAGGAGAA         GCAGAAGCCGA GTGAA TCGGTGCCTGC         TGTCCGGTGAGAGAC  51 232
   trd_A0265  250595 ..  250607 -  -3.3  -3.14132   CTGCGCCGGGAGCAA                GACCC GCT GTGTC                GCCTATGGGCAAGGG  44 146
   trd_A0263 NONE
   trd_A0262  247966 ..  248024 - -10.9  -2.56596   GCGGTGACGAAGGCA GTGACGGTCGCGCCGAGCGCGGTGCGATG CTC CATCGCTCAGC-CTCC-CGCGAGCGCCTC GAGCATCGGCCGGAA  59 5
        menD NONE
   trd_A0259  245256 ..  245287 -  -4.2  -3.53091   ACCGCTCCGTCGAAA      CGGCGGCGGAGCAG TCGA CTGGCGCGCCGACA       TGGACCGTGGTGCGG  51 148
   trd_A0254 NONE
   trd_A0253 NONE
   trd_A0252  237886 ..  237942 -  -4.4  -3.84246   TGCCGAACGAGGAAA CTGAGATCCGTTGGACCGCTCGCGGGG AAGCAG CCCCGCGA-CGGTCCAGTCG-TC-CGG ACAGGGAACGGGCCG  58 42
   trd_A0245  231141 ..  231162 -  -5.1  -2.61264   GCTCGGAGGGAGAAC           CGTGAC-GTC GGC GACCGTCTCG           TCAGGCAAGGATCAG  44 318
   trd_A0242  229938 ..  229972 - -29.4  -3.14211   ACCGGCTGGCAGGAA     GCGGCCCGGAGGAAGC GTT GCCTCCTCCGGGCCGC     GCTGATCAACGGACC 100 31
   trd_A0239 NONE
   trd_A0238  226344 ..  226375 -  -7.3  -2.70932   TCTTCCGGGGAATGA      TCGCGCCGAGGCAG GAGTA CT-CCTCGGCAGGA      GGCGGTCACCGGCGC  48 82
   trd_A0231 NONE
   trd_A0230 NONE
   trd_A0229  217647 ..  217672 -   -19  -3.27951   CACCTGAGTAGAACA         GCCGGCGCGG AGGATA CCGCGCCGGC          TCCCGCTCGTTCCTC  93 85
   trd_A0225 NONE
   trd_A0224 NONE
   trd_A0207 NONE
   trd_A0206  189447 ..  189473 -  -9.3  -3.61178   CGCACCGAGCTGAAA         CCCGGGGTTCG ATCCG CGGACCCCTGG         ATGGGCTGAGGACGC  64 123
   trd_A0202 NONE
   trd_A0201 NONE
   trd_A0200  181849 ..  181888 - -17.9  -4.58395   GGTATCCCCGAAAAA  CACCCCGCCGC-CCCGAT CGTGC AACGGGAGCAGCGGGGTG  CGGTCGCAAGTCGCT 100 52
   trd_A0196  179904 ..  179916 -  -9.1  -2.62983   GCGAGGCGTACATCA                CGGCA GCC TGCCG                CTGTGCTCCTCCCGA  54 398
   trd_A0195  178181 ..  178194 -  -3.7   -3.0894   GAACGACGGAGCGAA               CACGC CCAG GCGGG                TAGTTTCGCGACTCT  45 60
   trd_A0194  176044 ..  176069 -  -4.6  -3.64703   TGGGGCTGAGGGAAA         TTCCCTCAGC CCCACC GCTGCGGGAT          CAGGTCGGCTTCACC  55 25
   trd_A0193 NONE
   trd_A0192 NONE
   trd_A0191 NONE
   trd_A0190 NONE
   trd_A0188  169684 ..  169709 - -16.9  -3.35798   AGCGGCGAGCTACAA         GCTGGGGCAGA TGAT CCTGCCCCAGC          TCGAGGCGGGGACGC  87 437
   trd_A0186  168971 ..  169012 -  -2.7  -3.44146   CTGCTGTACAAGGAA CTCCTCTTCGCCCACTTCG ATCC CGTGGTGGCCGAAGCGGCC  GGTTTGCCCGTTGGG  48 486
   trd_A0181  165190 ..  165204 -  -4.2  -2.54896   GGTCGAGCGAATCGA               TCCGGT CGG ACTGGA               CGCGCTCGCCAGTCG  40 89
   trd_A0174 NONE
   trd_A0173 NONE
   trd_A0172 NONE
   trd_A0171 NONE
   trd_A0170  157631 ..  157650 -  -3.4  -3.14132   GGGTCGCCTGAGGAA            GATCGTCC GAAC GGTCGGTC             AGCGGAGCGGGGGTA  44 121
   trd_A0168  156352 ..  156375 -  -2.2  -2.62184   CGGGGGGGCACACCA          GCGGCTGAGG CTAC CCTCGTCCCC           GTGGCTTCCTCGCCC  38 200
   trd_A0163  152853 ..  152863 -  -2.4  -2.79183   CCTACTTCCACGAGA                 GCCC GGT GGGG                 TTGCGCTTTACCGCG  38 260
   trd_A0160 NONE
   trd_A0158  149346 ..  149364 -  -7.3  -3.61715   CATCGGGCTCAAGAA             CGACGCC GAGCA GGCGGCG             GAACTCGTCGGCGAT  58 259
         alr NONE
   trd_A0155  143985 ..  144001 -  -2.1  -2.87132   CTCGGGGGCGAGACA              GCATCAG GGC CGGAGGC              GGATGCCGAGCGCGT  40 12
   trd_A0154  143674 ..  143695 -    -5  -3.15544   TTGCACTTCGACGAA           CGCGGCGG TGATGC CCGCCACT            CAGATAAGTGTGCCA  47 25
   trd_A0153  142783 ..  142809 - -20.2  -5.40072   TGGCGCTGAAAAAAA         GAGCGGGACGGA ATA CCCGTCCCGCTC         TCGTGGACTCGCTCA 100 38
   trd_A0149  139129 ..  139143 - -11.4  -2.75064   TGCCGGAGCGAACGA               CAGCCG CAC CGGCTG               GTGCCGCGGTGACGA  62 196
   trd_A0146  136471 ..  136489 -    -3  -3.08996   TACGGCTACTGAACA             GCACGCGC GTC ACGAATGC             GTTTTCCGATCCGGC  44 458
   trd_A0144  134000 ..  134012 -  -9.1  -2.82623   CGCCCCGGACAAGGA                CGCTG GCG CAGCG                AGCAGGAATCGTGGC  56 63
   trd_A0142 NONE
   trd_A0141 NONE
   trd_A0139  130973 ..  130983 -  -6.8  -2.87931   CCGACCTGGTACACA                 CGCT TGC AGCG                 TTTCTTCTTCGTCGG  50 146
   trd_A0134  127853 ..  127883 -    -6  -3.19463   GCCACCAGCGAGGAA       CGGCCTCTTGACCT GGC AGGCCCAGACGACG       CGAGGTCTTTGCGAG  51 114
   trd_A0131 NONE
   trd_A0130  124221 ..  124254 - -19.6  -3.93288   CCTGAGCGAAGGAAA     CGGTCGTGGCGCGC TCTTGC GCGAGCCACGACCG      CCGATCGAAGCGCAC 100 50
   trd_A0127  122824 ..  122839 -  -4.6   -3.1372   GAGTGTCGACCAACA              GCTGTC GTTC GGCAGC               ATCGCGAGCGAACTT  47 158
   trd_A0125 NONE
   trd_A0124  120682 ..  120722 - -13.4  -3.56142   TCGAGGAAGAAGGAA TCGAGCCCCGCGATGTC GTGATCCT GACACCGCGGAGC-CGA  GAGCGCAGCGCTCTC  77 367
   trd_A0120  115558 ..  115568 -  -3.2  -2.91144   TCAGCCGGTAAAGCA                 GCCT GGC AAGC                 GGTGCATCGCATCAG  41 37
   trd_A0118 NONE
   trd_A0117 NONE
   trd_A0116 NONE
         crm NONE
         cmr NONE
         cmr NONE
         cmr NONE
   trd_A0111 NONE
   trd_A0110  106077 ..  106088 -  -7.2  -2.65532   ACCATCCCAAAGCGA                GCGG TGAA CCGC                 ACTGTCCTCCGGCGG  47 118
   trd_A0101   89594 ..   89605 -  -5.8  -3.29471   TTTCTACCAGATGAA                CGAG CGAA CTCG                 TGAACGGGTTACGAA  51 2
   trd_A0100   88043 ..   88066 -  -8.1  -3.16191   CCAGAGGCGCAGGAA          GCGATCCAG CGTTTC CTGGAGCGC           CGGCGGGCCAAGCAG  54 149
   trd_A0095 NONE
   trd_A0094 NONE
   trd_A0093 NONE
   trd_A0092   80791 ..   80835 -  -6.9  -2.50816   GCGGGATGCAGGAAG TCTCGCAGCTGAGCGGGCTGG TCG CGATCCCGCTCATCGGCTTGA TCGTCGCGCAAGGGA  47 109
   trd_A0090 NONE
   trd_A0089 NONE
   trd_A0088   74923 ..   74952 - -11.5  -3.32844   GTTCGCACCGTACAA       CATCCGGGTCAACA ACG TGCTG-CCCGGACG       CATCGCCACTGAACG  68 450
   trd_A0084   72446 ..   72465 -  -5.7  -2.71364   TCAGCGCGGCAACGA            CAGCACG CGGGCT CATGCTG             GCCTCCCGAAAAGGC  45 18
   trd_A0083   71448 ..   71461 -  -4.5  -3.10343   ACACTGACCACTGAA               CCGAC TGAC GTCGA                AGCGAGCGCTGACCT  47 45
   trd_A0082 NONE
   trd_A0081 NONE
   trd_A0080   68483 ..   68493 -  -6.8  -2.70932   CCCTCCCTTCAAGCA                 GCCT GCC AGGC                 GCTCACACCGAGATA  48 8
   trd_A0079 NONE
   trd_A0078   66312 ..   66322 -  -5.4  -3.01712   GCTGTTCTTTGAATA                 TCGA GAA TCGA                 TTCTCCATGATCAGC  47 63
   trd_A0077   65561 ..   65582 -  -2.2  -2.52015   TTGACACCCACGAAC           GTGCTCCT TTCGTC AGGAACTC            TGCTGTGGTTCCGGA  37 16
   trd_A0076   64806 ..   64831 -  -4.7  -2.80291   AACCAGCGGACGAGA         GCAACG-GTCGC CGC ACGACTCATCGC         TCCTACTCCTCGACG  43 28
   trd_A0075 NONE
   trd_A0074 NONE
   trd_A0073 NONE
   trd_A0072 NONE
   trd_A0071 NONE
   trd_A0070   59004 ..   59031 -  -2.6  -3.57144   GCTGCCACCCGGAAA        GAAGGCATGTCCG CGC CGCTC-TGCCTCC        GACGCACCCAGCGAC  48 291
   trd_A0069 NONE
   trd_A0068   55693 ..   55711 -    -3  -3.05384   GTCCGGCGCACCGAA             GTGTTCTC CCC GAGACCGC             TCGCCGACCGGAAGT  42 432
   trd_A0067   54856 ..   54872 -  -7.3  -4.49311   AGCAGCACGAGAAAA              CCGCTAT CAG ATAGCGA              CCGGGCGCAGGATGC  77 458
   trd_A0066   54251 ..   54289 - -15.2  -3.09648   CAAGAGAGGCGAAGA   GGGGCGGCGGTGCAGC TGGAGTC GCCGCACCGCCGCATC   AGCGATGAAGCGCCG  76 226
   trd_A0064 NONE
   trd_A0063   52044 ..   52070 -  -8.7  -2.52543   ATCGTCGGCAAGGCA        CGCCCTGC-CCA CGCT CGGTGCAGAGCG         TGCCTGCCGACGGTT  51 56
   trd_A0055 NONE
   trd_A0054   44085 ..   44101 -  -7.9  -3.53811   TGGACGGTGCGCAAA              GTCCTGC GCC GCCGGAC              TGCGCACCTGCGCGA  60 156
   trd_A0033 NONE
   trd_A0032 NONE
   trd_A0031 NONE
        fliL NONE
   trd_A0029 NONE
   trd_A0028   25281 ..   25293 -  -4.8  -2.65993   AGGAGAGGTAGACGA                GGCA TCACG TGCC                GCCACCCTCCGCCAG  42 17
   trd_A0027   24578 ..   24588 -  -8.2   -2.8007   GGAATCCAGCAACCA                 GCGC TCA GCGC                 GCCCGGCACCCTTTT  52 45
   trd_A0019 NONE
   trd_A0018   16503 ..   16513 -  -4.6  -2.52464   TCGTTCCGGAACCGA                 GCCG ACA CGAC                 GCTCATTCTACTGCC  42 28
   trd_A0017 NONE
   trd_A0016   14645 ..   14669 -  -3.5  -2.80816   TCTCGAGCCAGCAGA          CGATCACCC AGAACGA GGGTAGTCG          ATCAGCGGCAGCGCT  43 27
   trd_A0015   13933 ..   13951 -    -3    -4.183   GGAACTTGGAAGAAA             CAGCATGC GTC GCAGACCG             GGTCCGCGCGTTGGT  63 55
   trd_A0014   12697 ..   12716 - -11.4  -2.59748   TATGCTGATAAGCGA            GGCCCCGA CGAT TCGAGGCC             GGGAATCCGAAACCC  61 251
   trd_A0012   11276 ..   11289 -  -2.3  -3.48276   TGGCTTTTGACAGAA               CGGTT CGGC ATCCG                GCCACCGGCACCCCG  46 483
   trd_A0010    9656 ..    9713 - -10.7  -3.05816   GCATCCCGCATCCAA GCCGATGCGCGCCGGT-CGGTCGATGGGG TGAA CTCCATCG-CTGCACCGGCGCACA--GGC AGCCCCGCGACAGTC  62 318
   trd_A0006 NONE
   trd_A0005 NONE
   trd_A0004 NONE
   trd_A0002    2511 ..    2545 - -12.1  -2.71011   ATCTGCCGGTAACGA    CGC-GGCTTGCGCCCG GCAG CGAGCACCAGCCCGCG     GGTCGCGCTGCTCGC  65 269
