Theam_0001 PWY-5958 acridone alkaloid biosynthesis Theam_0001 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Theam_0001 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Theam_0008 PWY-5269 cardiolipin biosynthesis II Theam_0008 PWY-5668 cardiolipin biosynthesis I Theam_0011 PWY-6891 thiazole biosynthesis II (Bacillus) Theam_0011 PWY-6892 thiazole biosynthesis I (E. coli) Theam_0011 PWY-7560 methylerythritol phosphate pathway II Theam_0071 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type Theam_0071 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Theam_0071 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Theam_0071 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type Theam_0076 PWY-6890 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis Theam_0077 PWY-5532 adenosine nucleotides degradation IV Theam_0080 PWY-5686 UMP biosynthesis Theam_0094 PWY-5839 menaquinol-7 biosynthesis Theam_0094 PWY-5844 menaquinol-9 biosynthesis Theam_0094 PWY-5849 menaquinol-6 biosynthesis Theam_0094 PWY-5890 menaquinol-10 biosynthesis Theam_0094 PWY-5891 menaquinol-11 biosynthesis Theam_0094 PWY-5892 menaquinol-12 biosynthesis Theam_0094 PWY-5895 menaquinol-13 biosynthesis Theam_0106 PWY-7181 pyrimidine deoxyribonucleosides degradation Theam_0132 PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation Theam_0134 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Theam_0134 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Theam_0137 PWY-6167 flavin biosynthesis II (archaea) Theam_0137 PWY-6168 flavin biosynthesis III (fungi) Theam_0137 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) Theam_0140 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Theam_0145 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation Theam_0145 PWY-6596 adenosine nucleotides degradation I Theam_0145 PWY-7221 guanosine ribonucleotides de novo biosynthesis Theam_0146 PWY-4983 L-citrulline-nitric oxide cycle Theam_0146 PWY-4984 urea cycle Theam_0146 PWY-5 canavanine biosynthesis Theam_0146 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Theam_0146 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Theam_0147 PWY-6891 thiazole biosynthesis II (Bacillus) Theam_0147 PWY-6892 thiazole biosynthesis I (E. coli) Theam_0147 PWY-7560 methylerythritol phosphate pathway II Theam_0148 PWY-6891 thiazole biosynthesis II (Bacillus) Theam_0148 PWY-6892 thiazole biosynthesis I (E. coli) Theam_0148 PWY-7560 methylerythritol phosphate pathway II Theam_0153 PWY-5083 NAD/NADH phosphorylation and dephosphorylation Theam_0153 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Theam_0153 PWY-7269 NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast) Theam_0155 PWY-5198 factor 420 biosynthesis Theam_0163 PWY-5988 wound-induced proteolysis I Theam_0163 PWY-6018 seed germination protein turnover Theam_0170 PWY-5316 nicotine biosynthesis Theam_0170 PWY-7342 superpathway of nicotine biosynthesis Theam_0171 PWY-7221 guanosine ribonucleotides de novo biosynthesis Theam_0179 PWY-7219 adenosine ribonucleotides de novo biosynthesis Theam_0182 PWY-2941 L-lysine biosynthesis II Theam_0182 PWY-2942 L-lysine biosynthesis III Theam_0182 PWY-5097 L-lysine biosynthesis VI Theam_0184 PWY-2941 L-lysine biosynthesis II Theam_0184 PWY-2942 L-lysine biosynthesis III Theam_0184 PWY-5097 L-lysine biosynthesis VI Theam_0189 PWY-5686 UMP biosynthesis Theam_0205 PWY-5381 pyridine nucleotide cycling (plants) Theam_0205 PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde Theam_0206 PWY-1042 glycolysis IV (plant cytosol) Theam_0206 PWY-5484 glycolysis II (from fructose 6-phosphate) Theam_0206 PWY-6886 1-butanol autotrophic biosynthesis Theam_0206 PWY-6901 superpathway of glucose and xylose degradation Theam_0206 PWY-7003 glycerol degradation to butanol Theam_0218 PWY-6123 inosine-5'-phosphate biosynthesis I Theam_0218 PWY-7234 inosine-5'-phosphate biosynthesis III Theam_0227 PWY-6832 2-aminoethylphosphonate degradation II Theam_0231 PWY-5663 tetrahydrobiopterin biosynthesis I Theam_0231 PWY-5664 tetrahydrobiopterin biosynthesis II Theam_0231 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Theam_0231 PWY-6703 preQ0 biosynthesis Theam_0231 PWY-6983 tetrahydrobiopterin biosynthesis III Theam_0231 PWY-7442 drosopterin and aurodrosopterin biosynthesis Theam_0234 PWY-3801 sucrose degradation II (sucrose synthase) Theam_0234 PWY-6527 stachyose degradation Theam_0234 PWY-6981 chitin biosynthesis Theam_0234 PWY-7238 sucrose biosynthesis II Theam_0234 PWY-7343 UDP-glucose biosynthesis Theam_0237 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Theam_0237 PWY-5686 UMP biosynthesis Theam_0237 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Theam_0239 PWY-5958 acridone alkaloid biosynthesis Theam_0239 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Theam_0239 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Theam_0250 PWY-6871 3-methylbutanol biosynthesis Theam_0278 PWY-7219 adenosine ribonucleotides de novo biosynthesis Theam_0290 PWY-40 putrescine biosynthesis I Theam_0290 PWY-6305 putrescine biosynthesis IV Theam_0296 PWY-6700 queuosine biosynthesis Theam_0304 PWY-6834 spermidine biosynthesis III Theam_0308 PWY-4381 fatty acid biosynthesis initiation I Theam_0308 PWY-5743 3-hydroxypropanoate cycle Theam_0308 PWY-5744 glyoxylate assimilation Theam_0308 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Theam_0308 PWY-6679 jadomycin biosynthesis Theam_0308 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Theam_0324 PWY-6556 pyrimidine ribonucleosides salvage II Theam_0324 PWY-7181 pyrimidine deoxyribonucleosides degradation Theam_0324 PWY-7193 pyrimidine ribonucleosides salvage I Theam_0324 PWY-7199 pyrimidine deoxyribonucleosides salvage Theam_0328 PWY-6123 inosine-5'-phosphate biosynthesis I Theam_0328 PWY-6124 inosine-5'-phosphate biosynthesis II Theam_0328 PWY-7234 inosine-5'-phosphate biosynthesis III Theam_0331 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Theam_0345 PWY-6700 queuosine biosynthesis Theam_0348 PWY-7396 butanol and isobutanol biosynthesis (engineered) Theam_0349 PWY-2941 L-lysine biosynthesis II Theam_0349 PWY-2942 L-lysine biosynthesis III Theam_0349 PWY-5097 L-lysine biosynthesis VI Theam_0349 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Theam_0349 PWY-6559 spermidine biosynthesis II Theam_0349 PWY-6562 norspermidine biosynthesis Theam_0349 PWY-7153 grixazone biosynthesis Theam_0349 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Theam_0373 PWY-5101 L-isoleucine biosynthesis II Theam_0373 PWY-6871 3-methylbutanol biosynthesis Theam_0374 PWY-2941 L-lysine biosynthesis II Theam_0374 PWY-2942 L-lysine biosynthesis III Theam_0374 PWY-5097 L-lysine biosynthesis VI Theam_0374 PWY-6559 spermidine biosynthesis II Theam_0374 PWY-6562 norspermidine biosynthesis Theam_0374 PWY-7153 grixazone biosynthesis Theam_0375 PWY-6823 molybdenum cofactor biosynthesis Theam_0377 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Theam_0377 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Theam_0385 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Theam_0385 PWY-5723 Rubisco shunt Theam_0390 PWY-6012 acyl carrier protein metabolism I Theam_0390 PWY-6012-1 acyl carrier protein metabolism II (mammalian) Theam_0393 PWY-5367 petroselinate biosynthesis Theam_0393 PWY-5971 palmitate biosynthesis II (bacteria and plants) Theam_0393 PWY-5973 cis-vaccenate biosynthesis Theam_0393 PWY-5989 stearate biosynthesis II (bacteria and plants) Theam_0393 PWY-5994 palmitate biosynthesis I (animals and fungi) Theam_0393 PWY-6113 superpathway of mycolate biosynthesis Theam_0393 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) Theam_0393 PWY-6519 8-amino-7-oxononanoate biosynthesis I Theam_0393 PWY-6951 Theam_0393|Theam_0393|REF_jgi:Theam_0393|GeneID:10125428 Theam_0393 PWY-7053 docosahexaenoate biosynthesis I (lower eukaryotes) Theam_0393 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Theam_0393 PWYG-321 mycolate biosynthesis Theam_0397 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type Theam_0397 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Theam_0397 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Theam_0397 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type Theam_0412 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Theam_0412 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Theam_0412 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Theam_0412 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation Theam_0412 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Theam_0412 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Theam_0428 PWY-3961 phosphopantothenate biosynthesis II Theam_0429 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Theam_0431 PWY-6936 seleno-amino acid biosynthesis Theam_0433 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Theam_0439 PWY-7219 adenosine ribonucleotides de novo biosynthesis Theam_0440 PWY-6478 GDP-D-glycero-α-D-manno-heptose biosynthesis Theam_0441 PWY-6160 3-dehydroquinate biosynthesis II (archaea) Theam_0448 PWY-6167 flavin biosynthesis II (archaea) Theam_0448 PWY-6168 flavin biosynthesis III (fungi) Theam_0448 PWY-7219 adenosine ribonucleotides de novo biosynthesis Theam_0450 PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) Theam_0452 PWY-6167 flavin biosynthesis II (archaea) Theam_0452 PWY-6168 flavin biosynthesis III (fungi) Theam_0455 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Theam_0455 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Theam_0455 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Theam_0457 PWY-6936 seleno-amino acid biosynthesis Theam_0457 PWY-7274 D-cycloserine biosynthesis Theam_0459 PWY-5101 L-isoleucine biosynthesis II Theam_0459 PWY-5103 L-isoleucine biosynthesis III Theam_0459 PWY-5104 L-isoleucine biosynthesis IV Theam_0459 PWY-7111 pyruvate fermentation to isobutanol (engineered) Theam_0460 PWY-5101 L-isoleucine biosynthesis II Theam_0460 PWY-5103 L-isoleucine biosynthesis III Theam_0460 PWY-5104 L-isoleucine biosynthesis IV Theam_0460 PWY-5938 (R)-acetoin biosynthesis I Theam_0460 PWY-5939 (R)-acetoin biosynthesis II Theam_0460 PWY-6389 (S)-acetoin biosynthesis Theam_0460 PWY-7111 pyruvate fermentation to isobutanol (engineered) Theam_0461 PWY-5101 L-isoleucine biosynthesis II Theam_0461 PWY-5103 L-isoleucine biosynthesis III Theam_0461 PWY-5104 L-isoleucine biosynthesis IV Theam_0461 PWY-5938 (R)-acetoin biosynthesis I Theam_0461 PWY-5939 (R)-acetoin biosynthesis II Theam_0461 PWY-6389 (S)-acetoin biosynthesis Theam_0461 PWY-7111 pyruvate fermentation to isobutanol (engineered) Theam_0462 PWY-5958 acridone alkaloid biosynthesis Theam_0462 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Theam_0462 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Theam_0493 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Theam_0493 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Theam_0501 PWY-2781 cis-zeatin biosynthesis Theam_0502 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Theam_0505 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Theam_0505 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Theam_0506 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Theam_0506 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Theam_0507 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Theam_0509 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Theam_0509 PWY-6416 quinate degradation II Theam_0509 PWY-6707 gallate biosynthesis Theam_0514 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Theam_0520 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Theam_0520 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Theam_0530 PWY-6654 phosphopantothenate biosynthesis III Theam_0534 PWY-5101 L-isoleucine biosynthesis II Theam_0534 PWY-5103 L-isoleucine biosynthesis III Theam_0534 PWY-5104 L-isoleucine biosynthesis IV Theam_0534 PWY-7111 pyruvate fermentation to isobutanol (engineered) Theam_0546 PWY-4041 γ-glutamyl cycle Theam_0548 PWY-6672 cis-genanyl-CoA degradation Theam_0548 PWY-7118 chitin degradation to ethanol Theam_0566 PWY-6703 preQ0 biosynthesis Theam_0568 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Theam_0568 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Theam_0568 PWY-6268 adenosylcobalamin salvage from cobalamin Theam_0568 PWY-6269 adenosylcobalamin salvage from cobinamide II Theam_0569 PWY-7560 methylerythritol phosphate pathway II Theam_0577 PWY-3221 dTDP-L-rhamnose biosynthesis II Theam_0577 PWY-6808 dTDP-D-forosamine biosynthesis Theam_0577 PWY-6942 dTDP-D-desosamine biosynthesis Theam_0577 PWY-6953 dTDP-3-acetamido-3,6-dideoxy-α-D-galactose biosynthesis Theam_0577 PWY-6973 dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis Theam_0577 PWY-6974 dTDP-L-olivose biosynthesis Theam_0577 PWY-6976 dTDP-L-mycarose biosynthesis Theam_0577 PWY-7104 dTDP-L-megosamine biosynthesis Theam_0577 PWY-7301 dTDP-β-L-noviose biosynthesis Theam_0577 PWY-7312 dTDP-D-β-fucofuranose biosynthesis Theam_0577 PWY-7315 dTDP-N-acetylthomosamine biosynthesis Theam_0577 PWY-7316 dTDP-N-acetylviosamine biosynthesis Theam_0577 PWY-7318 dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis Theam_0577 PWY-7413 dTDP-6-deoxy-α-D-allose biosynthesis Theam_0577 PWY-7414 dTDP-α-D-mycaminose biosynthesis Theam_0577 PWY-7440 dTDP-β-L-4-epi-vancosamine biosynthesis Theam_0579 PWY-3221 dTDP-L-rhamnose biosynthesis II Theam_0579 PWY-6808 dTDP-D-forosamine biosynthesis Theam_0579 PWY-6942 dTDP-D-desosamine biosynthesis Theam_0579 PWY-6953 dTDP-3-acetamido-3,6-dideoxy-α-D-galactose biosynthesis Theam_0579 PWY-6973 dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis Theam_0579 PWY-6974 dTDP-L-olivose biosynthesis Theam_0579 PWY-6976 dTDP-L-mycarose biosynthesis Theam_0579 PWY-7104 dTDP-L-megosamine biosynthesis Theam_0579 PWY-7301 dTDP-β-L-noviose biosynthesis Theam_0579 PWY-7312 dTDP-D-β-fucofuranose biosynthesis Theam_0579 PWY-7315 dTDP-N-acetylthomosamine biosynthesis Theam_0579 PWY-7316 dTDP-N-acetylviosamine biosynthesis Theam_0579 PWY-7318 dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis Theam_0579 PWY-7413 dTDP-6-deoxy-α-D-allose biosynthesis Theam_0579 PWY-7414 dTDP-α-D-mycaminose biosynthesis Theam_0579 PWY-7440 dTDP-β-L-4-epi-vancosamine biosynthesis Theam_0586 PWY-1042 glycolysis IV (plant cytosol) Theam_0586 PWY-1622 formaldehyde assimilation I (serine pathway) Theam_0586 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Theam_0586 PWY-5484 glycolysis II (from fructose 6-phosphate) Theam_0586 PWY-5723 Rubisco shunt Theam_0586 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Theam_0586 PWY-6886 1-butanol autotrophic biosynthesis Theam_0586 PWY-6901 superpathway of glucose and xylose degradation Theam_0586 PWY-7003 glycerol degradation to butanol Theam_0586 PWY-7124 ethylene biosynthesis V (engineered) Theam_0586 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Theam_0593 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) Theam_0593 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) Theam_0593 PWY-6897 thiamin salvage II Theam_0593 PWY-6907 thiamin diphosphate biosynthesis III (Staphylococcus) Theam_0593 PWY-6908 thiamin diphosphate biosynthesis IV (eukaryotes) Theam_0593 PWY-7353 4-methyl-5(β-hydroxyethyl)thiazole salvage (yeast) Theam_0593 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) Theam_0602 PWY-1622 formaldehyde assimilation I (serine pathway) Theam_0602 PWY-5392 reductive TCA cycle II Theam_0602 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Theam_0602 PWY-5690 TCA cycle II (plants and fungi) Theam_0602 PWY-5913 TCA cycle VI (obligate autotrophs) Theam_0602 PWY-6728 methylaspartate cycle Theam_0602 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Theam_0602 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Theam_0602 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Theam_0605 PWY-7560 methylerythritol phosphate pathway II Theam_0606 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Theam_0606 PWY-6148 tetrahydromethanopterin biosynthesis Theam_0606 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea) Theam_0606 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) Theam_0610 PWY-6605 adenine and adenosine salvage II Theam_0610 PWY-6610 adenine and adenosine salvage IV Theam_0616 PWY-7560 methylerythritol phosphate pathway II Theam_0617 PWY-5971 palmitate biosynthesis II (bacteria and plants) Theam_0617 PWY-5973 cis-vaccenate biosynthesis Theam_0617 PWY-5989 stearate biosynthesis II (bacteria and plants) Theam_0617 PWY-5994 palmitate biosynthesis I (animals and fungi) Theam_0617 PWY-6113 superpathway of mycolate biosynthesis Theam_0617 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) Theam_0617 PWY-6519 8-amino-7-oxononanoate biosynthesis I Theam_0617 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Theam_0617 PWYG-321 mycolate biosynthesis Theam_0620 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Theam_0620 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Theam_0620 PWY-7185 UTP and CTP dephosphorylation I Theam_0620 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Theam_0620 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Theam_0624 PWY-4202 arsenate detoxification I (glutaredoxin) Theam_0624 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation Theam_0624 PWY-6608 guanosine nucleotides degradation III Theam_0624 PWY-6609 adenine and adenosine salvage III Theam_0624 PWY-6611 adenine and adenosine salvage V Theam_0624 PWY-6620 guanine and guanosine salvage Theam_0624 PWY-6627 salinosporamide A biosynthesis Theam_0624 PWY-6644 fluoroacetate and fluorothreonine biosynthesis Theam_0624 PWY-7179 purine deoxyribonucleosides degradation I Theam_0624 PWY-7179-1 purine deoxyribonucleosides degradation Theam_0629 PWY-381 nitrate reduction II (assimilatory) Theam_0629 PWY-5675 nitrate reduction V (assimilatory) Theam_0629 PWY-6549 L-glutamine biosynthesis III Theam_0629 PWY-6963 ammonia assimilation cycle I Theam_0629 PWY-6964 ammonia assimilation cycle II Theam_0631 PWY-2941 L-lysine biosynthesis II Theam_0631 PWY-2942 L-lysine biosynthesis III Theam_0631 PWY-5097 L-lysine biosynthesis VI Theam_0633 PWY-7303 3-dimethylallyl-4-hydroxybenzoate biosynthesis Theam_0645 PWY-1042 glycolysis IV (plant cytosol) Theam_0645 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Theam_0645 PWY-5484 glycolysis II (from fructose 6-phosphate) Theam_0645 PWY-5723 Rubisco shunt Theam_0645 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Theam_0645 PWY-6886 1-butanol autotrophic biosynthesis Theam_0645 PWY-6901 superpathway of glucose and xylose degradation Theam_0645 PWY-7003 glycerol degradation to butanol Theam_0645 PWY-7124 ethylene biosynthesis V (engineered) Theam_0645 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Theam_0648 PWY-6840 homoglutathione biosynthesis Theam_0648 PWY-7255 ergothioneine biosynthesis I (bacteria) Theam_0649 PWY-4041 γ-glutamyl cycle Theam_0649 PWY-5826 hypoglycin biosynthesis Theam_0654 PWY-3821 galactose degradation III Theam_0654 PWY-6317 galactose degradation I (Leloir pathway) Theam_0654 PWY-6397 mycolyl-arabinogalactan-peptidoglycan complex biosynthesis Theam_0654 PWY-6527 stachyose degradation Theam_0654 PWY-7328 superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis Theam_0654 PWY-7344 UDP-D-galactose biosynthesis Theam_0655 PWY-1042 glycolysis IV (plant cytosol) Theam_0655 PWY-5484 glycolysis II (from fructose 6-phosphate) Theam_0655 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Theam_0655 PWY-7003 glycerol degradation to butanol Theam_0665 PWY-5340 sulfate activation for sulfonation Theam_0666 PWY-5278 sulfite oxidation III Theam_0666 PWY-5340 sulfate activation for sulfonation Theam_0666 PWY-6683 sulfate reduction III (assimilatory) Theam_0666 PWY-6932 selenate reduction Theam_0676 PWY-6834 spermidine biosynthesis III Theam_0686 PWY-5667 CDP-diacylglycerol biosynthesis I Theam_0686 PWY-5981 CDP-diacylglycerol biosynthesis III Theam_0702 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Theam_0702 PWY-6148 tetrahydromethanopterin biosynthesis Theam_0702 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea) Theam_0702 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) Theam_0709 PWY-6654 phosphopantothenate biosynthesis III Theam_0714 PWY-5316 nicotine biosynthesis Theam_0714 PWY-7342 superpathway of nicotine biosynthesis Theam_0717 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Theam_0717 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Theam_0718 PWY-7176 UTP and CTP de novo biosynthesis Theam_0718 PWY-7177 UTP and CTP dephosphorylation II Theam_0718 PWY-7185 UTP and CTP dephosphorylation I Theam_0719 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Theam_0719 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Theam_0720 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Theam_0720 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Theam_0720 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Theam_0721 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Theam_0721 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Theam_0721 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Theam_0761 PWY-7039 phosphatidate metabolism, as a signaling molecule Theam_0773 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Theam_0774 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Theam_0783 PWY-5674 nitrate reduction IV (dissimilatory) Theam_0785 PWY-6823 molybdenum cofactor biosynthesis Theam_0790 PWY-5659 GDP-mannose biosynthesis Theam_0790 PWY-6073 alginate biosynthesis I (algal) Theam_0790 PWY-6082 alginate biosynthesis II (bacterial) Theam_0790 PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) Theam_0797 PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) Theam_0801 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Theam_0801 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Theam_0815 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Theam_0815 PWY-7176 UTP and CTP de novo biosynthesis Theam_0815 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Theam_0815 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Theam_0815 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation Theam_0815 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Theam_0815 PWY-7205 CMP phosphorylation Theam_0815 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Theam_0815 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Theam_0815 PWY-7221 guanosine ribonucleotides de novo biosynthesis Theam_0815 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Theam_0815 PWY-7224 purine deoxyribonucleosides salvage Theam_0815 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Theam_0815 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Theam_0822 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) Theam_0822 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) Theam_0824 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Theam_0824 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Theam_0826 PWY-2201 folate transformations I Theam_0826 PWY-5497 purine nucleobases degradation II (anaerobic) Theam_0827 PWY-6749 CMP-legionaminate biosynthesis I Theam_0831 PWY-6578 8-amino-7-oxononanoate biosynthesis III Theam_0852 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Theam_0852 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Theam_0853 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Theam_0853 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Theam_0857 PWY-6823 molybdenum cofactor biosynthesis Theam_0878 PWY-6823 molybdenum cofactor biosynthesis Theam_0890 PWY-6749 CMP-legionaminate biosynthesis I Theam_0893 PWY-6614 tetrahydrofolate biosynthesis Theam_0910 PWY-6167 flavin biosynthesis II (archaea) Theam_0910 PWY-6168 flavin biosynthesis III (fungi) Theam_0911 PWY-723 alkylnitronates degradation Theam_0912 PWY-4381 fatty acid biosynthesis initiation I Theam_0919 PWY-2201 folate transformations I Theam_0919 PWY-3841 folate transformations II Theam_0942 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Theam_0942 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Theam_0942 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Theam_0956 PWY-7205 CMP phosphorylation Theam_0958 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Theam_0958 PWY-6385 peptidoglycan biosynthesis III (mycobacteria) Theam_0958 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Theam_0958 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Theam_0960 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Theam_0960 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Theam_0965 PWY-5674 nitrate reduction IV (dissimilatory) Theam_0969 PWY-5198 factor 420 biosynthesis Theam_0969 PWY-7371 1,4-dihydroxy-6-naphthoate biosynthesis II Theam_0969 PWY-7374 1,4-dihydroxy-6-naphthoate biosynthesis I Theam_0970 PWY-5198 factor 420 biosynthesis Theam_0970 PWY-7371 1,4-dihydroxy-6-naphthoate biosynthesis II Theam_0970 PWY-7374 1,4-dihydroxy-6-naphthoate biosynthesis I Theam_0972 PWY-5484 glycolysis II (from fructose 6-phosphate) Theam_0974 PWY-3801 sucrose degradation II (sucrose synthase) Theam_0974 PWY-5054 sorbitol biosynthesis I Theam_0974 PWY-5384 sucrose degradation IV (sucrose phosphorylase) Theam_0974 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Theam_0974 PWY-5659 GDP-mannose biosynthesis Theam_0974 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Theam_0974 PWY-621 sucrose degradation III (sucrose invertase) Theam_0974 PWY-622 starch biosynthesis Theam_0974 PWY-6531 mannitol cycle Theam_0974 PWY-6981 chitin biosynthesis Theam_0974 PWY-7238 sucrose biosynthesis II Theam_0974 PWY-7347 sucrose biosynthesis III Theam_0974 PWY-7385 1,3-propanediol biosynthesis (engineered) Theam_0976 PWY-6749 CMP-legionaminate biosynthesis I Theam_0979 PWY-6317 galactose degradation I (Leloir pathway) Theam_0979 PWY-6527 stachyose degradation Theam_0980 PWY-622 starch biosynthesis Theam_0982 PWY-5067 glycogen biosynthesis II (from UDP-D-Glucose) Theam_0982 PWY-622 starch biosynthesis Theam_0984 PWY-4381 fatty acid biosynthesis initiation I Theam_0984 PWY-6799 fatty acid biosynthesis (plant mitochondria) Theam_0984 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Theam_0985 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Theam_0985 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Theam_0985 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Theam_0985 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Theam_0985 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Theam_0985 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Theam_0985 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Theam_0985 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Theam_0988 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) Theam_0988 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) Theam_0988 PWY-6896 thiamin salvage I Theam_0988 PWY-6897 thiamin salvage II Theam_1016 PWY-5531 chlorophyllide a biosynthesis II (anaerobic) Theam_1016 PWY-7159 chlorophyllide a biosynthesis III (aerobic, light independent) Theam_1017 PWY-6123 inosine-5'-phosphate biosynthesis I Theam_1017 PWY-6124 inosine-5'-phosphate biosynthesis II Theam_1017 PWY-7219 adenosine ribonucleotides de novo biosynthesis Theam_1017 PWY-7234 inosine-5'-phosphate biosynthesis III Theam_1021 PWY-5392 reductive TCA cycle II Theam_1021 PWY-5537 pyruvate fermentation to acetate V Theam_1021 PWY-5538 pyruvate fermentation to acetate VI Theam_1021 PWY-5690 TCA cycle II (plants and fungi) Theam_1021 PWY-5913 TCA cycle VI (obligate autotrophs) Theam_1021 PWY-6728 methylaspartate cycle Theam_1021 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Theam_1021 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Theam_1022 PWY-5392 reductive TCA cycle II Theam_1022 PWY-5537 pyruvate fermentation to acetate V Theam_1022 PWY-5538 pyruvate fermentation to acetate VI Theam_1022 PWY-5690 TCA cycle II (plants and fungi) Theam_1022 PWY-5913 TCA cycle VI (obligate autotrophs) Theam_1022 PWY-6728 methylaspartate cycle Theam_1022 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Theam_1022 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Theam_1023 PWY-5913 TCA cycle VI (obligate autotrophs) Theam_1023 PWY-6549 L-glutamine biosynthesis III Theam_1023 PWY-6728 methylaspartate cycle Theam_1023 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Theam_1023 PWY-7124 ethylene biosynthesis V (engineered) Theam_1023 PWY-7254 TCA cycle VII (acetate-producers) Theam_1023 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Theam_1041 PWY-6938 NADH repair Theam_1066 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Theam_1067 PWY-6160 3-dehydroquinate biosynthesis II (archaea) Theam_1075 PWY-5041 S-adenosyl-L-methionine cycle II Theam_1075 PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis Theam_1088 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Theam_1088 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Theam_1095 PWY-5057 L-valine degradation II Theam_1095 PWY-5076 L-leucine degradation III Theam_1095 PWY-5078 L-isoleucine degradation II Theam_1095 PWY-5101 L-isoleucine biosynthesis II Theam_1095 PWY-5103 L-isoleucine biosynthesis III Theam_1095 PWY-5104 L-isoleucine biosynthesis IV Theam_1095 PWY-5108 L-isoleucine biosynthesis V Theam_1106 PWY-5531 chlorophyllide a biosynthesis II (anaerobic) Theam_1106 PWY-7159 chlorophyllide a biosynthesis III (aerobic, light independent) Theam_1109 PWY-6829 tRNA methylation (yeast) Theam_1127 PWY-5839 menaquinol-7 biosynthesis Theam_1127 PWY-5844 menaquinol-9 biosynthesis Theam_1127 PWY-5849 menaquinol-6 biosynthesis Theam_1127 PWY-5890 menaquinol-10 biosynthesis Theam_1127 PWY-5891 menaquinol-11 biosynthesis Theam_1127 PWY-5892 menaquinol-12 biosynthesis Theam_1127 PWY-5895 menaquinol-13 biosynthesis Theam_1142 PWY-6281 L-selenocysteine biosynthesis II (archaea and eukaryotes) Theam_1154 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Theam_1154 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Theam_1157 PWY-7380 biotin biosynthesis from 8-amino-7-oxononanoate II Theam_1173 PWY-6123 inosine-5'-phosphate biosynthesis I Theam_1173 PWY-6124 inosine-5'-phosphate biosynthesis II Theam_1173 PWY-7234 inosine-5'-phosphate biosynthesis III Theam_1174 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Theam_1174 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Theam_1174 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Theam_1174 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) Theam_1189 PWY-7205 CMP phosphorylation Theam_1190 PWY-5381 pyridine nucleotide cycling (plants) Theam_1192 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Theam_1192 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Theam_1195 PWY-7180 2'-deoxy-α-D-ribose 1-phosphate degradation Theam_1196 PWY-5523 5,6-dimethylbenzimidazole biosynthesis Theam_1196 PWY-6167 flavin biosynthesis II (archaea) Theam_1196 PWY-6168 flavin biosynthesis III (fungi) Theam_1215 PWY-3341 L-proline biosynthesis III Theam_1215 PWY-4981 L-proline biosynthesis II (from arginine) Theam_1215 PWY-6344 L-ornithine degradation II (Stickland reaction) Theam_1219 PWY-1622 formaldehyde assimilation I (serine pathway) Theam_1219 PWY-181 photorespiration Theam_1219 PWY-2161 folate polyglutamylation Theam_1219 PWY-2201 folate transformations I Theam_1219 PWY-3661 glycine betaine degradation I Theam_1219 PWY-3661-1 glycine betaine degradation II (mammalian) Theam_1219 PWY-3841 folate transformations II Theam_1219 PWY-5497 purine nucleobases degradation II (anaerobic) Theam_1235 PWY-2301 myo-inositol biosynthesis Theam_1235 PWY-4702 phytate degradation I Theam_1235 PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation Theam_1249 PWY-5041 S-adenosyl-L-methionine cycle II Theam_1254 PWY-1042 glycolysis IV (plant cytosol) Theam_1254 PWY-5484 glycolysis II (from fructose 6-phosphate) Theam_1254 PWY-6901 superpathway of glucose and xylose degradation Theam_1254 PWY-7003 glycerol degradation to butanol Theam_1256 PWY-5316 nicotine biosynthesis Theam_1256 PWY-5381 pyridine nucleotide cycling (plants) Theam_1256 PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde Theam_1256 PWY-7342 superpathway of nicotine biosynthesis Theam_1257 PWY-5269 cardiolipin biosynthesis II Theam_1257 PWY-5668 cardiolipin biosynthesis I Theam_1261 PWY-1722 formate reduction to 5,10-methylenetetrahydrofolate Theam_1261 PWY-2201 folate transformations I Theam_1261 PWY-3841 folate transformations II Theam_1261 PWY-5030 L-histidine degradation III Theam_1261 PWY-5497 purine nucleobases degradation II (anaerobic) Theam_1261 PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate Theam_1266 PWY-2941 L-lysine biosynthesis II Theam_1266 PWY-5097 L-lysine biosynthesis VI Theam_1271 PWY-3781 aerobic respiration I (cytochrome c) Theam_1271 PWY-4302 aerobic respiration III (alternative oxidase pathway) Theam_1271 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Theam_1271 PWY-5690 TCA cycle II (plants and fungi) Theam_1271 PWY-6728 methylaspartate cycle Theam_1271 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Theam_1271 PWY-7254 TCA cycle VII (acetate-producers) Theam_1271 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Theam_1272 PWY-3781 aerobic respiration I (cytochrome c) Theam_1272 PWY-4302 aerobic respiration III (alternative oxidase pathway) Theam_1272 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Theam_1272 PWY-5690 TCA cycle II (plants and fungi) Theam_1272 PWY-6728 methylaspartate cycle Theam_1272 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Theam_1272 PWY-7254 TCA cycle VII (acetate-producers) Theam_1272 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Theam_1273 PWY-3781 aerobic respiration I (cytochrome c) Theam_1273 PWY-4302 aerobic respiration III (alternative oxidase pathway) Theam_1273 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Theam_1273 PWY-5690 TCA cycle II (plants and fungi) Theam_1273 PWY-6728 methylaspartate cycle Theam_1273 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Theam_1273 PWY-7254 TCA cycle VII (acetate-producers) Theam_1273 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Theam_1274 PWY-3781 aerobic respiration I (cytochrome c) Theam_1274 PWY-4302 aerobic respiration III (alternative oxidase pathway) Theam_1274 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Theam_1274 PWY-5690 TCA cycle II (plants and fungi) Theam_1274 PWY-6728 methylaspartate cycle Theam_1274 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Theam_1274 PWY-7254 TCA cycle VII (acetate-producers) Theam_1274 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Theam_1279 PWY-1042 glycolysis IV (plant cytosol) Theam_1279 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Theam_1279 PWY-5484 glycolysis II (from fructose 6-phosphate) Theam_1279 PWY-5723 Rubisco shunt Theam_1279 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Theam_1279 PWY-6886 1-butanol autotrophic biosynthesis Theam_1279 PWY-6901 superpathway of glucose and xylose degradation Theam_1279 PWY-7003 glycerol degradation to butanol Theam_1279 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Theam_1279 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Theam_1282 PWY-6749 CMP-legionaminate biosynthesis I Theam_1287 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Theam_1301 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Theam_1301 PWY-5723 Rubisco shunt Theam_1323 PWY-5484 glycolysis II (from fructose 6-phosphate) Theam_1328 PWY-5686 UMP biosynthesis Theam_1330 PWY-5686 UMP biosynthesis Theam_1334 PWY-7560 methylerythritol phosphate pathway II Theam_1337 PWY-5372 carbon tetrachloride degradation II Theam_1337 PWY-6780 hydrogen production VI Theam_1342 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Theam_1342 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Theam_1342 PWY-6269 adenosylcobalamin salvage from cobinamide II Theam_1343 PWY-101 photosynthesis light reactions Theam_1343 PWY-7230 ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic) Theam_1364 PWY-5663 tetrahydrobiopterin biosynthesis I Theam_1364 PWY-5664 tetrahydrobiopterin biosynthesis II Theam_1364 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Theam_1364 PWY-6703 preQ0 biosynthesis Theam_1364 PWY-6983 tetrahydrobiopterin biosynthesis III Theam_1364 PWY-7442 drosopterin and aurodrosopterin biosynthesis Theam_1366 PWY-6599 guanine and guanosine salvage II Theam_1366 PWY-6609 adenine and adenosine salvage III Theam_1366 PWY-6610 adenine and adenosine salvage IV Theam_1366 PWY-6620 guanine and guanosine salvage Theam_1368 PWY-4983 L-citrulline-nitric oxide cycle Theam_1368 PWY-4984 urea cycle Theam_1368 PWY-5 canavanine biosynthesis Theam_1368 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Theam_1368 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Theam_1372 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Theam_1372 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Theam_1372 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Theam_1377 PWY-5392 reductive TCA cycle II Theam_1377 PWY-5537 pyruvate fermentation to acetate V Theam_1377 PWY-5538 pyruvate fermentation to acetate VI Theam_1377 PWY-5690 TCA cycle II (plants and fungi) Theam_1377 PWY-5913 TCA cycle VI (obligate autotrophs) Theam_1377 PWY-6728 methylaspartate cycle Theam_1377 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Theam_1377 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Theam_1389 PWY-7380 biotin biosynthesis from 8-amino-7-oxononanoate II Theam_1402 PWY-7221 guanosine ribonucleotides de novo biosynthesis Theam_1408 PWY-5392 reductive TCA cycle II Theam_1408 PWY-5537 pyruvate fermentation to acetate V Theam_1408 PWY-5538 pyruvate fermentation to acetate VI Theam_1408 PWY-5690 TCA cycle II (plants and fungi) Theam_1408 PWY-5913 TCA cycle VI (obligate autotrophs) Theam_1408 PWY-6728 methylaspartate cycle Theam_1408 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Theam_1408 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Theam_1409 PWY-5392 reductive TCA cycle II Theam_1409 PWY-5537 pyruvate fermentation to acetate V Theam_1409 PWY-5538 pyruvate fermentation to acetate VI Theam_1409 PWY-5690 TCA cycle II (plants and fungi) Theam_1409 PWY-5913 TCA cycle VI (obligate autotrophs) Theam_1409 PWY-6728 methylaspartate cycle Theam_1409 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Theam_1409 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Theam_1448 PWY-7219 adenosine ribonucleotides de novo biosynthesis Theam_1478 PWY-5155 β-alanine biosynthesis III Theam_1479 PWY-2301 myo-inositol biosynthesis Theam_1479 PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) Theam_1479 PWY-6372 1D-myo-inositol hexakisphosphate biosynthesis IV (Dictyostelium) Theam_1479 PWY-6580 phosphatidylinositol biosynthesis I (bacteria) Theam_1479 PWY-6664 di-myo-inositol phosphate biosynthesis Theam_1482 PWY-723 alkylnitronates degradation Theam_1485 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Theam_1485 PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate Theam_1486 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Theam_1486 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Theam_1486 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Theam_1503 PWY-4381 fatty acid biosynthesis initiation I Theam_1503 PWY-5743 3-hydroxypropanoate cycle Theam_1503 PWY-5744 glyoxylate assimilation Theam_1503 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Theam_1503 PWY-6679 jadomycin biosynthesis Theam_1503 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Theam_1510 PWY-5041 S-adenosyl-L-methionine cycle II Theam_1517 PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation Theam_1517 PWY-7174 S-methyl-5-thio-α-D-ribose 1-phosphate degradation II Theam_1531 PWY-2161 folate polyglutamylation Theam_1538 PWY-5269 cardiolipin biosynthesis II Theam_1538 PWY-5668 cardiolipin biosynthesis I Theam_1544 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Theam_1552 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Theam_1552 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Theam_1552 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Theam_1552 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Theam_1552 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Theam_1552 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Theam_1552 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Theam_1552 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Theam_1554 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Theam_1554 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Theam_1554 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Theam_1554 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Theam_1554 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Theam_1554 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Theam_1554 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Theam_1554 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Theam_1561 PWY-5041 S-adenosyl-L-methionine cycle II Theam_1561 PWY-6151 S-adenosyl-L-methionine cycle I Theam_1561 PWY-6936 seleno-amino acid biosynthesis Theam_1561 PWY-702 L-methionine biosynthesis II Theam_1567 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Theam_1567 PWY-5686 UMP biosynthesis Theam_1567 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Theam_1568 PWY-7219 adenosine ribonucleotides de novo biosynthesis Theam_1576 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type Theam_1576 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Theam_1576 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Theam_1576 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type Theam_1577 PWY-6610 adenine and adenosine salvage IV Theam_1591 PWY-6829 tRNA methylation (yeast) Theam_1591 PWY-7285 methylwyosine biosynthesis Theam_1591 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis Theam_1596 PWY-3461 L-tyrosine biosynthesis II Theam_1596 PWY-3462 L-phenylalanine biosynthesis II Theam_1596 PWY-6120 L-tyrosine biosynthesis III Theam_1596 PWY-6627 salinosporamide A biosynthesis Theam_1596 PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) Theam_1600 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Theam_1627 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type Theam_1627 PWY-6549 L-glutamine biosynthesis III Theam_1627 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Theam_1627 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type Theam_1632 PWY-6703 preQ0 biosynthesis Theam_1633 PWY-6281 L-selenocysteine biosynthesis II (archaea and eukaryotes) Theam_1638 PWY-7560 methylerythritol phosphate pathway II Theam_1647 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation Theam_1659 PWY-7219 adenosine ribonucleotides de novo biosynthesis Theam_1661 PWY-7219 adenosine ribonucleotides de novo biosynthesis Theam_1672 PWY-702 L-methionine biosynthesis II Theam_1692 PWY-7560 methylerythritol phosphate pathway II Theam_1693 PWY-5667 CDP-diacylglycerol biosynthesis I Theam_1693 PWY-5981 CDP-diacylglycerol biosynthesis III Theam_1693 PWY-7411 superpathway of phosphatidate biosynthesis (yeast) Theam_1693 PWY-7417 phospholipid remodeling (phosphatidate, yeast) Theam_1697 PWY-4981 L-proline biosynthesis II (from arginine) Theam_1697 PWY-4984 urea cycle Theam_1697 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Theam_1712 PWY-5381 pyridine nucleotide cycling (plants) Theam_1712 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation Theam_1712 PWY-6596 adenosine nucleotides degradation I Theam_1712 PWY-6606 guanosine nucleotides degradation II Theam_1712 PWY-6607 guanosine nucleotides degradation I Theam_1712 PWY-6608 guanosine nucleotides degradation III Theam_1712 PWY-7185 UTP and CTP dephosphorylation I Theam_1726 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Theam_1729 PWY-6700 queuosine biosynthesis