Thicy_0004 PWY-5274 sulfide oxidation II (sulfide dehydrogenase) Thicy_0005 PWY-6749 CMP-legionaminate biosynthesis I Thicy_0006 PWY-6823 molybdenum cofactor biosynthesis Thicy_0008 PWY-6823 molybdenum cofactor biosynthesis Thicy_0009 PWY-6823 molybdenum cofactor biosynthesis Thicy_0013 PWY-6151 S-adenosyl-L-methionine cycle I Thicy_0013 PWY-6153 autoinducer AI-2 biosynthesis I Thicy_0013 PWY-6154 autoinducer AI-2 biosynthesis II (Vibrio) Thicy_0014 PWY-6151 S-adenosyl-L-methionine cycle I Thicy_0014 PWY-6153 autoinducer AI-2 biosynthesis I Thicy_0014 PWY-6154 autoinducer AI-2 biosynthesis II (Vibrio) Thicy_0018 PWY-6936 seleno-amino acid biosynthesis Thicy_0020 PWY-7219 adenosine ribonucleotides de novo biosynthesis Thicy_0024 PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation Thicy_0037 PWY-2201 folate transformations I Thicy_0037 PWY-3841 folate transformations II Thicy_0041 PWY-5755 4-hydroxybenzoate biosynthesis II (microbes) Thicy_0041 PWY-5870 ubiquinol-8 biosynthesis (eukaryotic) Thicy_0041 PWY-6148 tetrahydromethanopterin biosynthesis Thicy_0048 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Thicy_0049 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Thicy_0049 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Thicy_0052 PWY-702 L-methionine biosynthesis II Thicy_0053 PWY-5913 TCA cycle VI (obligate autotrophs) Thicy_0053 PWY-6549 L-glutamine biosynthesis III Thicy_0053 PWY-6728 methylaspartate cycle Thicy_0053 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Thicy_0053 PWY-7124 ethylene biosynthesis V (engineered) Thicy_0053 PWY-7254 TCA cycle VII (acetate-producers) Thicy_0053 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Thicy_0054 PWY-2723 trehalose degradation V Thicy_0054 PWY-3801 sucrose degradation II (sucrose synthase) Thicy_0054 PWY-5384 sucrose degradation IV (sucrose phosphorylase) Thicy_0054 PWY-5661 GDP-glucose biosynthesis Thicy_0054 PWY-5661-1 Thicy_0054|Thicy_0054|YP_004536309.1|GeneID:10718844 Thicy_0054 PWY-5940 streptomycin biosynthesis Thicy_0054 PWY-5941 glycogen degradation II (eukaryotic) Thicy_0054 PWY-622 starch biosynthesis Thicy_0054 PWY-6731 starch degradation III Thicy_0054 PWY-6737 starch degradation V Thicy_0054 PWY-6749 CMP-legionaminate biosynthesis I Thicy_0054 PWY-7238 sucrose biosynthesis II Thicy_0054 PWY-7343 UDP-glucose biosynthesis Thicy_0057 PWY-2201 folate transformations I Thicy_0057 PWY-5497 purine nucleobases degradation II (anaerobic) Thicy_0071 PWY-4081 glutathione redox reactions I Thicy_0073 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Thicy_0073 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Thicy_0076 PWY-7221 guanosine ribonucleotides de novo biosynthesis Thicy_0077 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Thicy_0078 PWY-6164 3-dehydroquinate biosynthesis I Thicy_0079 PWY-2723 trehalose degradation V Thicy_0079 PWY-5384 sucrose degradation IV (sucrose phosphorylase) Thicy_0079 PWY-5661 GDP-glucose biosynthesis Thicy_0079 PWY-5940 streptomycin biosynthesis Thicy_0079 PWY-621 sucrose degradation III (sucrose invertase) Thicy_0079 PWY-622 starch biosynthesis Thicy_0079 PWY-6731 starch degradation III Thicy_0079 PWY-6737 starch degradation V Thicy_0079 PWY-6981 chitin biosynthesis Thicy_0079 PWY-7238 sucrose biosynthesis II Thicy_0079 PWY-7343 UDP-glucose biosynthesis Thicy_0081 PWY-6854 ethylene biosynthesis III (microbes) Thicy_0088 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Thicy_0088 PWY-5723 Rubisco shunt Thicy_0088 PWY-6891 thiazole biosynthesis II (Bacillus) Thicy_0088 PWY-6892 thiazole biosynthesis I (E. coli) Thicy_0088 PWY-6901 superpathway of glucose and xylose degradation Thicy_0088 PWY-7560 methylerythritol phosphate pathway II Thicy_0089 PWY-1042 glycolysis IV (plant cytosol) Thicy_0089 PWY-5484 glycolysis II (from fructose 6-phosphate) Thicy_0089 PWY-6901 superpathway of glucose and xylose degradation Thicy_0089 PWY-7003 glycerol degradation to butanol Thicy_0090 PWY-1042 glycolysis IV (plant cytosol) Thicy_0090 PWY-5484 glycolysis II (from fructose 6-phosphate) Thicy_0090 PWY-6886 1-butanol autotrophic biosynthesis Thicy_0090 PWY-6901 superpathway of glucose and xylose degradation Thicy_0090 PWY-7003 glycerol degradation to butanol Thicy_0091 PWY-1042 glycolysis IV (plant cytosol) Thicy_0091 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Thicy_0091 PWY-5484 glycolysis II (from fructose 6-phosphate) Thicy_0091 PWY-5723 Rubisco shunt Thicy_0091 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Thicy_0091 PWY-6886 1-butanol autotrophic biosynthesis Thicy_0091 PWY-6901 superpathway of glucose and xylose degradation Thicy_0091 PWY-7003 glycerol degradation to butanol Thicy_0091 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Thicy_0091 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Thicy_0092 PWY-1042 glycolysis IV (plant cytosol) Thicy_0092 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Thicy_0092 PWY-5484 glycolysis II (from fructose 6-phosphate) Thicy_0092 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Thicy_0092 PWY-7385 1,3-propanediol biosynthesis (engineered) Thicy_0095 PWY-7380 biotin biosynthesis from 8-amino-7-oxononanoate II Thicy_0096 PWY-6123 inosine-5'-phosphate biosynthesis I Thicy_0096 PWY-6124 inosine-5'-phosphate biosynthesis II Thicy_0096 PWY-7234 inosine-5'-phosphate biosynthesis III Thicy_0098 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Thicy_0098 PWY-5723 Rubisco shunt Thicy_0099 PWY-181 photorespiration Thicy_0100 PWY-5958 acridone alkaloid biosynthesis Thicy_0100 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Thicy_0100 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Thicy_0101 PWY-5958 acridone alkaloid biosynthesis Thicy_0101 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Thicy_0101 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Thicy_0105 PWY-6834 spermidine biosynthesis III Thicy_0151 PWY-2941 L-lysine biosynthesis II Thicy_0151 PWY-2942 L-lysine biosynthesis III Thicy_0151 PWY-5097 L-lysine biosynthesis VI Thicy_0175 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Thicy_0175 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Thicy_0198 PWY-6823 molybdenum cofactor biosynthesis Thicy_0198 PWY-6891 thiazole biosynthesis II (Bacillus) Thicy_0198 PWY-6892 thiazole biosynthesis I (E. coli) Thicy_0198 PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis Thicy_0199 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Thicy_0199 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Thicy_0200 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Thicy_0200 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Thicy_0206 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Thicy_0207 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) Thicy_0207 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) Thicy_0207 PWY-6897 thiamin salvage II Thicy_0207 PWY-6907 thiamin diphosphate biosynthesis III (Staphylococcus) Thicy_0207 PWY-6908 thiamin diphosphate biosynthesis IV (eukaryotes) Thicy_0207 PWY-7353 4-methyl-5(β-hydroxyethyl)thiazole salvage (yeast) Thicy_0207 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) Thicy_0213 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Thicy_0214 PWY-5101 L-isoleucine biosynthesis II Thicy_0214 PWY-5103 L-isoleucine biosynthesis III Thicy_0214 PWY-5104 L-isoleucine biosynthesis IV Thicy_0214 PWY-7111 pyruvate fermentation to isobutanol (engineered) Thicy_0222 PWY-3801 sucrose degradation II (sucrose synthase) Thicy_0222 PWY-6527 stachyose degradation Thicy_0222 PWY-6981 chitin biosynthesis Thicy_0222 PWY-7238 sucrose biosynthesis II Thicy_0222 PWY-7343 UDP-glucose biosynthesis Thicy_0223 PWY-3801 sucrose degradation II (sucrose synthase) Thicy_0223 PWY-5054 sorbitol biosynthesis I Thicy_0223 PWY-5384 sucrose degradation IV (sucrose phosphorylase) Thicy_0223 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Thicy_0223 PWY-5659 GDP-mannose biosynthesis Thicy_0223 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Thicy_0223 PWY-621 sucrose degradation III (sucrose invertase) Thicy_0223 PWY-622 starch biosynthesis Thicy_0223 PWY-6531 mannitol cycle Thicy_0223 PWY-6981 chitin biosynthesis Thicy_0223 PWY-7238 sucrose biosynthesis II Thicy_0223 PWY-7347 sucrose biosynthesis III Thicy_0223 PWY-7385 1,3-propanediol biosynthesis (engineered) Thicy_0224 PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) Thicy_0225 PWY-5669 phosphatidylethanolamine biosynthesis I Thicy_0226 PWY-6871 3-methylbutanol biosynthesis Thicy_0229 PWY-2301 myo-inositol biosynthesis Thicy_0229 PWY-4702 phytate degradation I Thicy_0229 PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation Thicy_0231 PWY-6936 seleno-amino acid biosynthesis Thicy_0231 PWY-7274 D-cycloserine biosynthesis Thicy_0234 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Thicy_0234 PWY-7176 UTP and CTP de novo biosynthesis Thicy_0234 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Thicy_0234 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Thicy_0234 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation Thicy_0234 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Thicy_0234 PWY-7205 CMP phosphorylation Thicy_0234 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Thicy_0234 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Thicy_0234 PWY-7221 guanosine ribonucleotides de novo biosynthesis Thicy_0234 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Thicy_0234 PWY-7224 purine deoxyribonucleosides salvage Thicy_0234 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Thicy_0234 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Thicy_0241 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Thicy_0241 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Thicy_0246 PWY-7158 L-phenylalanine degradation V Thicy_0249 PWY-5101 L-isoleucine biosynthesis II Thicy_0249 PWY-5103 L-isoleucine biosynthesis III Thicy_0249 PWY-5104 L-isoleucine biosynthesis IV Thicy_0249 PWY-5938 (R)-acetoin biosynthesis I Thicy_0249 PWY-5939 (R)-acetoin biosynthesis II Thicy_0249 PWY-6389 (S)-acetoin biosynthesis Thicy_0249 PWY-7111 pyruvate fermentation to isobutanol (engineered) Thicy_0250 PWY-5101 L-isoleucine biosynthesis II Thicy_0250 PWY-5103 L-isoleucine biosynthesis III Thicy_0250 PWY-5104 L-isoleucine biosynthesis IV Thicy_0250 PWY-5938 (R)-acetoin biosynthesis I Thicy_0250 PWY-5939 (R)-acetoin biosynthesis II Thicy_0250 PWY-6389 (S)-acetoin biosynthesis Thicy_0250 PWY-7111 pyruvate fermentation to isobutanol (engineered) Thicy_0251 PWY-5101 L-isoleucine biosynthesis II Thicy_0251 PWY-5103 L-isoleucine biosynthesis III Thicy_0251 PWY-5104 L-isoleucine biosynthesis IV Thicy_0251 PWY-7111 pyruvate fermentation to isobutanol (engineered) Thicy_0255 PWY-1042 glycolysis IV (plant cytosol) Thicy_0255 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Thicy_0255 PWY-5484 glycolysis II (from fructose 6-phosphate) Thicy_0255 PWY-5723 Rubisco shunt Thicy_0255 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Thicy_0255 PWY-6886 1-butanol autotrophic biosynthesis Thicy_0255 PWY-6901 superpathway of glucose and xylose degradation Thicy_0255 PWY-7003 glycerol degradation to butanol Thicy_0255 PWY-7124 ethylene biosynthesis V (engineered) Thicy_0255 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Thicy_0259 PWY-5667 CDP-diacylglycerol biosynthesis I Thicy_0259 PWY-5981 CDP-diacylglycerol biosynthesis III Thicy_0263 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) Thicy_0263 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) Thicy_0264 PWY-3961 phosphopantothenate biosynthesis II Thicy_0265 PWY-5971 palmitate biosynthesis II (bacteria and plants) Thicy_0265 PWY-5973 cis-vaccenate biosynthesis Thicy_0265 PWY-5989 stearate biosynthesis II (bacteria and plants) Thicy_0265 PWY-5994 palmitate biosynthesis I (animals and fungi) Thicy_0265 PWY-6113 superpathway of mycolate biosynthesis Thicy_0265 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) Thicy_0265 PWY-6519 8-amino-7-oxononanoate biosynthesis I Thicy_0265 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Thicy_0265 PWYG-321 mycolate biosynthesis Thicy_0275 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Thicy_0275 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Thicy_0277 PWY-5686 UMP biosynthesis Thicy_0284 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Thicy_0284 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Thicy_0284 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Thicy_0284 PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation Thicy_0294 PWY-4041 γ-glutamyl cycle Thicy_0294 PWY-5826 hypoglycin biosynthesis Thicy_0298 PWY-5686 UMP biosynthesis Thicy_0301 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Thicy_0315 PWY-3841 folate transformations II Thicy_0315 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Thicy_0315 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Thicy_0315 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Thicy_0315 PWY-7199 pyrimidine deoxyribonucleosides salvage Thicy_0315 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Thicy_0316 PWY-3841 folate transformations II Thicy_0316 PWY-6614 tetrahydrofolate biosynthesis Thicy_0319 PWY-5686 UMP biosynthesis Thicy_0320 PWY-5686 UMP biosynthesis Thicy_0329 PWY-6938 NADH repair Thicy_0334 PWY-5344 L-homocysteine biosynthesis Thicy_0336 PWY-3341 L-proline biosynthesis III Thicy_0336 PWY-4981 L-proline biosynthesis II (from arginine) Thicy_0336 PWY-6344 L-ornithine degradation II (Stickland reaction) Thicy_0338 PWY-5663 tetrahydrobiopterin biosynthesis I Thicy_0338 PWY-5664 tetrahydrobiopterin biosynthesis II Thicy_0338 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Thicy_0338 PWY-6703 preQ0 biosynthesis Thicy_0338 PWY-6983 tetrahydrobiopterin biosynthesis III Thicy_0338 PWY-7442 drosopterin and aurodrosopterin biosynthesis Thicy_0357 PWY-1042 glycolysis IV (plant cytosol) Thicy_0357 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Thicy_0357 PWY-5484 glycolysis II (from fructose 6-phosphate) Thicy_0357 PWY-6531 mannitol cycle Thicy_0357 PWY-7385 1,3-propanediol biosynthesis (engineered) Thicy_0365 PWY-5839 menaquinol-7 biosynthesis Thicy_0365 PWY-5844 menaquinol-9 biosynthesis Thicy_0365 PWY-5849 menaquinol-6 biosynthesis Thicy_0365 PWY-5890 menaquinol-10 biosynthesis Thicy_0365 PWY-5891 menaquinol-11 biosynthesis Thicy_0365 PWY-5892 menaquinol-12 biosynthesis Thicy_0365 PWY-5895 menaquinol-13 biosynthesis Thicy_0368 PWY-6281 L-selenocysteine biosynthesis II (archaea and eukaryotes) Thicy_0370 PWY-2941 L-lysine biosynthesis II Thicy_0370 PWY-5097 L-lysine biosynthesis VI Thicy_0387 PWY-5041 S-adenosyl-L-methionine cycle II Thicy_0387 PWY-6151 S-adenosyl-L-methionine cycle I Thicy_0387 PWY-6936 seleno-amino acid biosynthesis Thicy_0387 PWY-702 L-methionine biosynthesis II Thicy_0390 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Thicy_0390 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Thicy_0390 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Thicy_0391 PWY-6123 inosine-5'-phosphate biosynthesis I Thicy_0391 PWY-6124 inosine-5'-phosphate biosynthesis II Thicy_0391 PWY-7234 inosine-5'-phosphate biosynthesis III Thicy_0397 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Thicy_0397 PWY-6416 quinate degradation II Thicy_0397 PWY-6707 gallate biosynthesis Thicy_0432 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Thicy_0433 PWY-5350 thiosulfate disproportionation III (rhodanese) Thicy_0435 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Thicy_0435 PWY-5723 Rubisco shunt Thicy_0440 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Thicy_0442 PWY-5386 methylglyoxal degradation I Thicy_0454 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation Thicy_0454 PWY-6596 adenosine nucleotides degradation I Thicy_0454 PWY-7221 guanosine ribonucleotides de novo biosynthesis Thicy_0455 PWY-7221 guanosine ribonucleotides de novo biosynthesis Thicy_0466 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Thicy_0466 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Thicy_0477 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Thicy_0477 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Thicy_0481 PWY-5663 tetrahydrobiopterin biosynthesis I Thicy_0481 PWY-5664 tetrahydrobiopterin biosynthesis II Thicy_0481 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Thicy_0481 PWY-6703 preQ0 biosynthesis Thicy_0481 PWY-6983 tetrahydrobiopterin biosynthesis III Thicy_0481 PWY-7442 drosopterin and aurodrosopterin biosynthesis Thicy_0482 PWY-3781 aerobic respiration I (cytochrome c) Thicy_0482 PWY-6692 Fe(II) oxidation Thicy_0482 PWY-7082 ammonia oxidation IV (autotrophic ammonia oxidizers) Thicy_0482 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Thicy_0492 PWY-6829 tRNA methylation (yeast) Thicy_0492 PWY-7285 methylwyosine biosynthesis Thicy_0492 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis Thicy_0505 PWY-2941 L-lysine biosynthesis II Thicy_0505 PWY-2942 L-lysine biosynthesis III Thicy_0505 PWY-5097 L-lysine biosynthesis VI Thicy_0505 PWY-6559 spermidine biosynthesis II Thicy_0505 PWY-6562 norspermidine biosynthesis Thicy_0505 PWY-7153 grixazone biosynthesis Thicy_0510 PWY-2781 cis-zeatin biosynthesis Thicy_0517 PWY-7219 adenosine ribonucleotides de novo biosynthesis Thicy_0522 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Thicy_0528 PWY-1722 formate reduction to 5,10-methylenetetrahydrofolate Thicy_0528 PWY-2201 folate transformations I Thicy_0528 PWY-3841 folate transformations II Thicy_0528 PWY-5030 L-histidine degradation III Thicy_0528 PWY-5497 purine nucleobases degradation II (anaerobic) Thicy_0528 PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate Thicy_0566 PWY-6749 CMP-legionaminate biosynthesis I Thicy_0572 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Thicy_0572 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Thicy_0572 PWY-6268 adenosylcobalamin salvage from cobalamin Thicy_0572 PWY-6269 adenosylcobalamin salvage from cobinamide II Thicy_0590 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Thicy_0592 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Thicy_0592 PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate Thicy_0593 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Thicy_0593 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Thicy_0593 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Thicy_0607 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Thicy_0609 PWY-6409 pyoverdine I biosynthesis Thicy_0609 PWY-6562 norspermidine biosynthesis Thicy_0609 PWY-761 rhizobactin 1021 biosynthesis Thicy_0615 PWY-6703 preQ0 biosynthesis Thicy_0618 PWY-7396 butanol and isobutanol biosynthesis (engineered) Thicy_0620 PWY-2941 L-lysine biosynthesis II Thicy_0620 PWY-2942 L-lysine biosynthesis III Thicy_0620 PWY-5097 L-lysine biosynthesis VI Thicy_0620 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Thicy_0620 PWY-6559 spermidine biosynthesis II Thicy_0620 PWY-6562 norspermidine biosynthesis Thicy_0620 PWY-7153 grixazone biosynthesis Thicy_0620 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Thicy_0625 PWY-4381 fatty acid biosynthesis initiation I Thicy_0625 PWY-5743 3-hydroxypropanoate cycle Thicy_0625 PWY-5744 glyoxylate assimilation Thicy_0625 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Thicy_0625 PWY-6679 jadomycin biosynthesis Thicy_0625 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Thicy_0626 PWY-2161 folate polyglutamylation Thicy_0628 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Thicy_0628 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Thicy_0628 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Thicy_0628 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) Thicy_0633 PWY-6614 tetrahydrofolate biosynthesis Thicy_0634 PWY-6749 CMP-legionaminate biosynthesis I Thicy_0635 PWY-1042 glycolysis IV (plant cytosol) Thicy_0635 PWY-5484 glycolysis II (from fructose 6-phosphate) Thicy_0635 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Thicy_0635 PWY-7003 glycerol degradation to butanol Thicy_0649 PWY-3781 aerobic respiration I (cytochrome c) Thicy_0649 PWY-4302 aerobic respiration III (alternative oxidase pathway) Thicy_0649 PWY-5083 NAD/NADH phosphorylation and dephosphorylation Thicy_0649 PWY-6692 Fe(II) oxidation Thicy_0652 PWY-6749 CMP-legionaminate biosynthesis I Thicy_0663 PWY-6123 inosine-5'-phosphate biosynthesis I Thicy_0663 PWY-6124 inosine-5'-phosphate biosynthesis II Thicy_0663 PWY-7219 adenosine ribonucleotides de novo biosynthesis Thicy_0663 PWY-7234 inosine-5'-phosphate biosynthesis III Thicy_0664 PWY-5747 2-methylcitrate cycle II Thicy_0675 PWY-5669 phosphatidylethanolamine biosynthesis I Thicy_0676 PWY-4983 L-citrulline-nitric oxide cycle Thicy_0676 PWY-4984 urea cycle Thicy_0676 PWY-5 canavanine biosynthesis Thicy_0676 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Thicy_0676 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Thicy_0677 PWY-5269 cardiolipin biosynthesis II Thicy_0677 PWY-5668 cardiolipin biosynthesis I Thicy_0683 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Thicy_0687 PWY-5386 methylglyoxal degradation I Thicy_0694 PWY-5316 nicotine biosynthesis Thicy_0694 PWY-5381 pyridine nucleotide cycling (plants) Thicy_0694 PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde Thicy_0694 PWY-7342 superpathway of nicotine biosynthesis Thicy_0699 PWY-6891 thiazole biosynthesis II (Bacillus) Thicy_0699 PWY-6892 thiazole biosynthesis I (E. coli) Thicy_0699 PWY-7560 methylerythritol phosphate pathway II Thicy_0701 PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA Thicy_0701 PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA Thicy_0707 PWY-4381 fatty acid biosynthesis initiation I Thicy_0707 PWY-5743 3-hydroxypropanoate cycle Thicy_0707 PWY-5744 glyoxylate assimilation Thicy_0707 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Thicy_0707 PWY-6679 jadomycin biosynthesis Thicy_0707 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Thicy_0709 PWY-7176 UTP and CTP de novo biosynthesis Thicy_0709 PWY-7177 UTP and CTP dephosphorylation II Thicy_0709 PWY-7185 UTP and CTP dephosphorylation I Thicy_0710 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Thicy_0710 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Thicy_0711 PWY-1042 glycolysis IV (plant cytosol) Thicy_0711 PWY-1622 formaldehyde assimilation I (serine pathway) Thicy_0711 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Thicy_0711 PWY-5484 glycolysis II (from fructose 6-phosphate) Thicy_0711 PWY-5723 Rubisco shunt Thicy_0711 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Thicy_0711 PWY-6886 1-butanol autotrophic biosynthesis Thicy_0711 PWY-6901 superpathway of glucose and xylose degradation Thicy_0711 PWY-7003 glycerol degradation to butanol Thicy_0711 PWY-7124 ethylene biosynthesis V (engineered) Thicy_0711 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Thicy_0714 PWY-5381 pyridine nucleotide cycling (plants) Thicy_0714 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation Thicy_0714 PWY-6596 adenosine nucleotides degradation I Thicy_0714 PWY-6606 guanosine nucleotides degradation II Thicy_0714 PWY-6607 guanosine nucleotides degradation I Thicy_0714 PWY-6608 guanosine nucleotides degradation III Thicy_0714 PWY-7185 UTP and CTP dephosphorylation I Thicy_0748 PWY-6936 seleno-amino acid biosynthesis Thicy_0754 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Thicy_0755 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Thicy_0755 PWY-6855 chitin degradation I (archaea) Thicy_0755 PWY-6906 chitin derivatives degradation Thicy_0763 PWY-5269 cardiolipin biosynthesis II Thicy_0763 PWY-5668 cardiolipin biosynthesis I Thicy_0782 PWY-6683 sulfate reduction III (assimilatory) Thicy_0785 PWY-5194 siroheme biosynthesis Thicy_0785 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Thicy_0787 PWY-6823 molybdenum cofactor biosynthesis Thicy_0788 PWY-5964 guanylyl molybdenum cofactor biosynthesis Thicy_0804 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Thicy_0810 PWY-5686 UMP biosynthesis Thicy_0814 PWY-7205 CMP phosphorylation Thicy_0815 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Thicy_0816 PWY-7303 3-dimethylallyl-4-hydroxybenzoate biosynthesis Thicy_0818 PWY-3461 L-tyrosine biosynthesis II Thicy_0818 PWY-3462 L-phenylalanine biosynthesis II Thicy_0818 PWY-6120 L-tyrosine biosynthesis III Thicy_0818 PWY-6627 salinosporamide A biosynthesis Thicy_0818 PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) Thicy_0821 PWY-5855 ubiquinol-7 biosynthesis (prokaryotic) Thicy_0821 PWY-5856 ubiquinol-9 biosynthesis (prokaryotic) Thicy_0821 PWY-5857 ubiquinol-10 biosynthesis (prokaryotic) Thicy_0821 PWY-5870 ubiquinol-8 biosynthesis (eukaryotic) Thicy_0821 PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) Thicy_0821 PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) Thicy_0821 PWY-5873 ubiquinol-7 biosynthesis (eukaryotic) Thicy_0821 PWY-6708 ubiquinol-8 biosynthesis (prokaryotic) Thicy_0821 PWY-7230 ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic) Thicy_0821 PWY-7233 ubiquinol-6 bypass biosynthesis (eukaryotic) Thicy_0834 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Thicy_0834 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Thicy_0834 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Thicy_0836 PWY-2941 L-lysine biosynthesis II Thicy_0836 PWY-2942 L-lysine biosynthesis III Thicy_0836 PWY-5097 L-lysine biosynthesis VI Thicy_0857 PWY-5971 palmitate biosynthesis II (bacteria and plants) Thicy_0857 PWY-5973 cis-vaccenate biosynthesis Thicy_0857 PWY-5989 stearate biosynthesis II (bacteria and plants) Thicy_0857 PWY-6113 superpathway of mycolate biosynthesis Thicy_0857 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) Thicy_0857 PWY-6519 8-amino-7-oxononanoate biosynthesis I Thicy_0857 PWY-7096 triclosan resistance Thicy_0857 PWYG-321 mycolate biosynthesis Thicy_0872 PWY-6672 cis-genanyl-CoA degradation Thicy_0872 PWY-7118 chitin degradation to ethanol Thicy_0877 PWY-3781 aerobic respiration I (cytochrome c) Thicy_0877 PWY-4302 aerobic respiration III (alternative oxidase pathway) Thicy_0877 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Thicy_0877 PWY-5690 TCA cycle II (plants and fungi) Thicy_0877 PWY-6728 methylaspartate cycle Thicy_0877 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Thicy_0877 PWY-7254 TCA cycle VII (acetate-producers) Thicy_0877 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Thicy_0878 PWY-3781 aerobic respiration I (cytochrome c) Thicy_0878 PWY-4302 aerobic respiration III (alternative oxidase pathway) Thicy_0878 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Thicy_0878 PWY-5690 TCA cycle II (plants and fungi) Thicy_0878 PWY-6728 methylaspartate cycle Thicy_0878 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Thicy_0878 PWY-7254 TCA cycle VII (acetate-producers) Thicy_0878 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Thicy_0881 PWY-6012 acyl carrier protein metabolism I Thicy_0881 PWY-6012-1 acyl carrier protein metabolism II (mammalian) Thicy_0890 PWY-5316 nicotine biosynthesis Thicy_0890 PWY-7342 superpathway of nicotine biosynthesis Thicy_0906 PWY-3821 galactose degradation III Thicy_0906 PWY-6317 galactose degradation I (Leloir pathway) Thicy_0906 PWY-6397 mycolyl-arabinogalactan-peptidoglycan complex biosynthesis Thicy_0906 PWY-6527 stachyose degradation Thicy_0906 PWY-7328 superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis Thicy_0906 PWY-7344 UDP-D-galactose biosynthesis Thicy_0909 PWY-3821 galactose degradation III Thicy_0909 PWY-6317 galactose degradation I (Leloir pathway) Thicy_0909 PWY-6397 mycolyl-arabinogalactan-peptidoglycan complex biosynthesis Thicy_0909 PWY-6527 stachyose degradation Thicy_0909 PWY-7328 superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis Thicy_0909 PWY-7344 UDP-D-galactose biosynthesis Thicy_0921 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Thicy_0921 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Thicy_0961 PWY-5971 palmitate biosynthesis II (bacteria and plants) Thicy_0961 PWY-5973 cis-vaccenate biosynthesis Thicy_0961 PWY-5989 stearate biosynthesis II (bacteria and plants) Thicy_0961 PWY-5994 palmitate biosynthesis I (animals and fungi) Thicy_0961 PWY-6113 superpathway of mycolate biosynthesis Thicy_0961 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) Thicy_0961 PWY-6519 8-amino-7-oxononanoate biosynthesis I Thicy_0961 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Thicy_0961 PWYG-321 mycolate biosynthesis Thicy_0976 PWY-3221 dTDP-L-rhamnose biosynthesis II Thicy_0976 PWY-6808 dTDP-D-forosamine biosynthesis Thicy_0976 PWY-6942 dTDP-D-desosamine biosynthesis Thicy_0976 PWY-6953 dTDP-3-acetamido-3,6-dideoxy-α-D-galactose biosynthesis Thicy_0976 PWY-6973 dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis Thicy_0976 PWY-6974 dTDP-L-olivose biosynthesis Thicy_0976 PWY-6976 dTDP-L-mycarose biosynthesis Thicy_0976 PWY-7104 dTDP-L-megosamine biosynthesis Thicy_0976 PWY-7301 dTDP-β-L-noviose biosynthesis Thicy_0976 PWY-7312 dTDP-D-β-fucofuranose biosynthesis Thicy_0976 PWY-7315 dTDP-N-acetylthomosamine biosynthesis Thicy_0976 PWY-7316 dTDP-N-acetylviosamine biosynthesis Thicy_0976 PWY-7318 dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis Thicy_0976 PWY-7413 dTDP-6-deoxy-α-D-allose biosynthesis Thicy_0976 PWY-7414 dTDP-α-D-mycaminose biosynthesis Thicy_0976 PWY-7440 dTDP-β-L-4-epi-vancosamine biosynthesis Thicy_0979 PWY-6281 L-selenocysteine biosynthesis II (archaea and eukaryotes) Thicy_0989 PWY-6700 queuosine biosynthesis Thicy_0990 PWY-6700 queuosine biosynthesis Thicy_1014 PWY-6703 preQ0 biosynthesis Thicy_1025 PWY-5316 nicotine biosynthesis Thicy_1025 PWY-7342 superpathway of nicotine biosynthesis Thicy_1033 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Thicy_1033 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Thicy_1033 PWY-6164 3-dehydroquinate biosynthesis I Thicy_1035 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) Thicy_1035 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) Thicy_1035 PWY-6896 thiamin salvage I Thicy_1035 PWY-6897 thiamin salvage II Thicy_1037 PWY-6167 flavin biosynthesis II (archaea) Thicy_1037 PWY-6168 flavin biosynthesis III (fungi) Thicy_1038 PWY-6167 flavin biosynthesis II (archaea) Thicy_1038 PWY-6168 flavin biosynthesis III (fungi) Thicy_1038 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) Thicy_1039 PWY-6167 flavin biosynthesis II (archaea) Thicy_1039 PWY-6168 flavin biosynthesis III (fungi) Thicy_1039 PWY-7219 adenosine ribonucleotides de novo biosynthesis Thicy_1042 PWY-1622 formaldehyde assimilation I (serine pathway) Thicy_1042 PWY-181 photorespiration Thicy_1042 PWY-2161 folate polyglutamylation Thicy_1042 PWY-2201 folate transformations I Thicy_1042 PWY-3661 glycine betaine degradation I Thicy_1042 PWY-3661-1 glycine betaine degradation II (mammalian) Thicy_1042 PWY-3841 folate transformations II Thicy_1042 PWY-5497 purine nucleobases degradation II (anaerobic) Thicy_1047 PWY-5392 reductive TCA cycle II Thicy_1047 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Thicy_1047 PWY-5690 TCA cycle II (plants and fungi) Thicy_1047 PWY-5913 TCA cycle VI (obligate autotrophs) Thicy_1047 PWY-6728 methylaspartate cycle Thicy_1047 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Thicy_1047 PWY-7254 TCA cycle VII (acetate-producers) Thicy_1047 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Thicy_1053 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Thicy_1053 PWY-5686 UMP biosynthesis Thicy_1053 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Thicy_1054 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Thicy_1054 PWY-5686 UMP biosynthesis Thicy_1054 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Thicy_1055 PWY-2941 L-lysine biosynthesis II Thicy_1055 PWY-2942 L-lysine biosynthesis III Thicy_1055 PWY-5097 L-lysine biosynthesis VI Thicy_1059 PWY-5083 NAD/NADH phosphorylation and dephosphorylation Thicy_1059 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Thicy_1059 PWY-7269 NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast) Thicy_1073 PWY-5663 tetrahydrobiopterin biosynthesis I Thicy_1073 PWY-5664 tetrahydrobiopterin biosynthesis II Thicy_1073 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Thicy_1073 PWY-6703 preQ0 biosynthesis Thicy_1073 PWY-6983 tetrahydrobiopterin biosynthesis III Thicy_1073 PWY-7442 drosopterin and aurodrosopterin biosynthesis Thicy_1087 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Thicy_1087 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Thicy_1113 PWY-5386 methylglyoxal degradation I Thicy_1120 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Thicy_1120 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Thicy_1121 PWY-6902 chitin degradation II Thicy_1125 PWY-5381 pyridine nucleotide cycling (plants) Thicy_1125 PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde Thicy_1126 PWY-5392 reductive TCA cycle II Thicy_1126 PWY-5537 pyruvate fermentation to acetate V Thicy_1126 PWY-5538 pyruvate fermentation to acetate VI Thicy_1126 PWY-5690 TCA cycle II (plants and fungi) Thicy_1126 PWY-5913 TCA cycle VI (obligate autotrophs) Thicy_1126 PWY-6728 methylaspartate cycle Thicy_1126 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Thicy_1126 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Thicy_1127 PWY-5392 reductive TCA cycle II Thicy_1127 PWY-5537 pyruvate fermentation to acetate V Thicy_1127 PWY-5538 pyruvate fermentation to acetate VI Thicy_1127 PWY-5690 TCA cycle II (plants and fungi) Thicy_1127 PWY-5913 TCA cycle VI (obligate autotrophs) Thicy_1127 PWY-6728 methylaspartate cycle Thicy_1127 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Thicy_1127 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Thicy_1137 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Thicy_1137 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Thicy_1137 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Thicy_1137 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation Thicy_1137 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Thicy_1137 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Thicy_1140 PWY-5958 acridone alkaloid biosynthesis Thicy_1140 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Thicy_1140 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Thicy_1143 PWY-5367 petroselinate biosynthesis Thicy_1143 PWY-5971 palmitate biosynthesis II (bacteria and plants) Thicy_1143 PWY-5973 cis-vaccenate biosynthesis Thicy_1143 PWY-5989 stearate biosynthesis II (bacteria and plants) Thicy_1143 PWY-5994 palmitate biosynthesis I (animals and fungi) Thicy_1143 PWY-6113 superpathway of mycolate biosynthesis Thicy_1143 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) Thicy_1143 PWY-6519 8-amino-7-oxononanoate biosynthesis I Thicy_1143 PWY-6951 Thicy_1143|Thicy_1143|YP_004537389.1|GeneID:10719972 Thicy_1143 PWY-7053 docosahexaenoate biosynthesis I (lower eukaryotes) Thicy_1143 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Thicy_1143 PWYG-321 mycolate biosynthesis Thicy_1144 PWY-4381 fatty acid biosynthesis initiation I Thicy_1144 PWY-6799 fatty acid biosynthesis (plant mitochondria) Thicy_1144 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Thicy_1145 PWY-4381 fatty acid biosynthesis initiation I Thicy_1177 PWY-5523 5,6-dimethylbenzimidazole biosynthesis Thicy_1177 PWY-6167 flavin biosynthesis II (archaea) Thicy_1177 PWY-6168 flavin biosynthesis III (fungi) Thicy_1182 PWY-7204 pyridoxal 5'-phosphate salvage II (plants) Thicy_1182 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) Thicy_1193 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Thicy_1193 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Thicy_1193 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Thicy_1193 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Thicy_1193 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Thicy_1193 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Thicy_1193 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Thicy_1193 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Thicy_1194 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Thicy_1194 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Thicy_1194 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Thicy_1194 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Thicy_1194 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Thicy_1194 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Thicy_1194 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Thicy_1194 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Thicy_1238 PWY-5484 glycolysis II (from fructose 6-phosphate) Thicy_1240 PWY-1622 formaldehyde assimilation I (serine pathway) Thicy_1240 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type Thicy_1240 PWY-5913 TCA cycle VI (obligate autotrophs) Thicy_1240 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Thicy_1240 PWY-6146 Methanobacterium thermoautotrophicum biosynthetic metabolism Thicy_1240 PWY-6549 L-glutamine biosynthesis III Thicy_1240 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Thicy_1240 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type Thicy_1240 PWY-7124 ethylene biosynthesis V (engineered) Thicy_1241 PWY-5155 β-alanine biosynthesis III Thicy_1243 PWY-6654 phosphopantothenate biosynthesis III Thicy_1244 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Thicy_1244 PWY-6148 tetrahydromethanopterin biosynthesis Thicy_1244 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea) Thicy_1244 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) Thicy_1249 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation Thicy_1256 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Thicy_1256 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Thicy_1259 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) Thicy_1259 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) Thicy_1260 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) Thicy_1260 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) Thicy_1260 PWY-7382 lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast) Thicy_1277 PWY-381 nitrate reduction II (assimilatory) Thicy_1277 PWY-5675 nitrate reduction V (assimilatory) Thicy_1277 PWY-6549 L-glutamine biosynthesis III Thicy_1277 PWY-6963 ammonia assimilation cycle I Thicy_1277 PWY-6964 ammonia assimilation cycle II Thicy_1283 PWY-5484 glycolysis II (from fructose 6-phosphate) Thicy_1296 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) Thicy_1296 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) Thicy_1296 PWY-6897 thiamin salvage II Thicy_1296 PWY-6907 thiamin diphosphate biosynthesis III (Staphylococcus) Thicy_1296 PWY-6908 thiamin diphosphate biosynthesis IV (eukaryotes) Thicy_1296 PWY-7353 4-methyl-5(β-hydroxyethyl)thiazole salvage (yeast) Thicy_1296 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) Thicy_1297 PWY-6910 hydroxymethylpyrimidine salvage Thicy_1297 PWY-7356 thiamin salvage IV (yeast) Thicy_1297 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) Thicy_1299 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Thicy_1299 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Thicy_1306 PWY-5057 L-valine degradation II Thicy_1306 PWY-5076 L-leucine degradation III Thicy_1306 PWY-5078 L-isoleucine degradation II Thicy_1306 PWY-5101 L-isoleucine biosynthesis II Thicy_1306 PWY-5103 L-isoleucine biosynthesis III Thicy_1306 PWY-5104 L-isoleucine biosynthesis IV Thicy_1306 PWY-5108 L-isoleucine biosynthesis V Thicy_1308 PWY-4981 L-proline biosynthesis II (from arginine) Thicy_1308 PWY-4984 urea cycle Thicy_1308 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Thicy_1312 PWY-5941 glycogen degradation II (eukaryotic) Thicy_1312 PWY-622 starch biosynthesis Thicy_1312 PWY-6731 starch degradation III Thicy_1312 PWY-6737 starch degradation V Thicy_1312 PWY-7238 sucrose biosynthesis II Thicy_1313 PWY-622 starch biosynthesis Thicy_1314 PWY-5067 glycogen biosynthesis II (from UDP-D-Glucose) Thicy_1314 PWY-622 starch biosynthesis Thicy_1315 PWY-5941 glycogen degradation II (eukaryotic) Thicy_1315 PWY-6724 starch degradation II Thicy_1315 PWY-6737 starch degradation V Thicy_1315 PWY-7238 sucrose biosynthesis II Thicy_1317 PWY-622 starch biosynthesis Thicy_1318 PWY-2723 trehalose degradation V Thicy_1318 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Thicy_1318 PWY-5661 GDP-glucose biosynthesis Thicy_1318 PWY-7238 sucrose biosynthesis II Thicy_1318 PWY-7385 1,3-propanediol biosynthesis (engineered) Thicy_1328 PWY-6123 inosine-5'-phosphate biosynthesis I Thicy_1328 PWY-7234 inosine-5'-phosphate biosynthesis III Thicy_1332 PWY-5041 S-adenosyl-L-methionine cycle II Thicy_1332 PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis Thicy_1333 PWY-2201 folate transformations I Thicy_1333 PWY-3841 folate transformations II Thicy_1342 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Thicy_1342 PWY-6385 peptidoglycan biosynthesis III (mycobacteria) Thicy_1342 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Thicy_1342 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Thicy_1344 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Thicy_1344 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Thicy_1345 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Thicy_1345 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Thicy_1345 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Thicy_1346 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Thicy_1346 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Thicy_1363 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Thicy_1363 PWY-6148 tetrahydromethanopterin biosynthesis Thicy_1363 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea) Thicy_1363 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) Thicy_1382 PWY-5381 pyridine nucleotide cycling (plants) Thicy_1382 PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde Thicy_1409 PWY-6174 mevalonate pathway II (archaea) Thicy_1409 PWY-7391 isoprene biosynthesis II (engineered) Thicy_1409 PWY-7524 mevalonate pathway III (archaea) Thicy_1409 PWY-922 mevalonate pathway I Thicy_1410 PWY-5123 trans, trans-farnesyl diphosphate biosynthesis Thicy_1410 PWY-6174 mevalonate pathway II (archaea) Thicy_1410 PWY-6383 mono-trans, poly-cis decaprenyl phosphate biosynthesis Thicy_1410 PWY-6859 all-trans-farnesol biosynthesis Thicy_1410 PWY-7102 bisabolene biosynthesis Thicy_1410 PWY-7391 isoprene biosynthesis II (engineered) Thicy_1410 PWY-7524 mevalonate pathway III (archaea) Thicy_1410 PWY-7560 methylerythritol phosphate pathway II Thicy_1410 PWY-922 mevalonate pathway I Thicy_1411 PWY-6174 mevalonate pathway II (archaea) Thicy_1411 PWY-7391 isoprene biosynthesis II (engineered) Thicy_1411 PWY-7524 mevalonate pathway III (archaea) Thicy_1411 PWY-922 mevalonate pathway I Thicy_1412 PWY-3821 galactose degradation III Thicy_1412 PWY-6174 mevalonate pathway II (archaea) Thicy_1412 PWY-6317 galactose degradation I (Leloir pathway) Thicy_1412 PWY-6527 stachyose degradation Thicy_1412 PWY-7391 isoprene biosynthesis II (engineered) Thicy_1412 PWY-922 mevalonate pathway I Thicy_1413 PWY-3821 galactose degradation III Thicy_1413 PWY-6174 mevalonate pathway II (archaea) Thicy_1413 PWY-6317 galactose degradation I (Leloir pathway) Thicy_1413 PWY-6527 stachyose degradation Thicy_1413 PWY-7391 isoprene biosynthesis II (engineered) Thicy_1413 PWY-922 mevalonate pathway I Thicy_1414 PWY-7391 isoprene biosynthesis II (engineered) Thicy_1414 PWY-922 mevalonate pathway I Thicy_1433 PWY-5988 wound-induced proteolysis I Thicy_1433 PWY-6018 seed germination protein turnover Thicy_1489 PWY-5344 L-homocysteine biosynthesis Thicy_1489 PWY-7174 S-methyl-5-thio-α-D-ribose 1-phosphate degradation II Thicy_1534 PWY-3781 aerobic respiration I (cytochrome c) Thicy_1534 PWY-4521 arsenite oxidation I (respiratory) Thicy_1534 PWY-6692 Fe(II) oxidation Thicy_1534 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Thicy_1535 PWY-3781 aerobic respiration I (cytochrome c) Thicy_1535 PWY-4521 arsenite oxidation I (respiratory) Thicy_1535 PWY-6692 Fe(II) oxidation Thicy_1535 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Thicy_1538 PWY-1622 formaldehyde assimilation I (serine pathway) Thicy_1538 PWY-5392 reductive TCA cycle II Thicy_1538 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Thicy_1538 PWY-5690 TCA cycle II (plants and fungi) Thicy_1538 PWY-5913 TCA cycle VI (obligate autotrophs) Thicy_1538 PWY-6728 methylaspartate cycle Thicy_1538 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Thicy_1538 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Thicy_1538 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Thicy_1548 PWY-2582 brassinosteroid biosynthesis II Thicy_1548 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) Thicy_1548 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) Thicy_1548 PWY-6948 sitosterol degradation to androstenedione Thicy_1548 PWY-699 brassinosteroid biosynthesis I Thicy_1548 PWY-7299 progesterone biosynthesis Thicy_1550 PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation Thicy_1551 PWY-2582 brassinosteroid biosynthesis II Thicy_1551 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) Thicy_1551 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) Thicy_1551 PWY-6948 sitosterol degradation to androstenedione Thicy_1551 PWY-699 brassinosteroid biosynthesis I Thicy_1551 PWY-7299 progesterone biosynthesis Thicy_1556 PWY-7158 L-phenylalanine degradation V Thicy_1564 PWY-5532 adenosine nucleotides degradation IV Thicy_1564 PWY-5723 Rubisco shunt Thicy_1565 PWY-5532 adenosine nucleotides degradation IV Thicy_1565 PWY-5723 Rubisco shunt Thicy_1567 PWY-6519 8-amino-7-oxononanoate biosynthesis I Thicy_1571 PWY-6519 8-amino-7-oxononanoate biosynthesis I Thicy_1571 PWY-6578 8-amino-7-oxononanoate biosynthesis III Thicy_1571 PWY-7147 8-amino-7-oxononanoate biosynthesis II Thicy_1572 PWY-7380 biotin biosynthesis from 8-amino-7-oxononanoate II Thicy_1575 PWY-5384 sucrose degradation IV (sucrose phosphorylase) Thicy_1577 PWY-5656 mannosylglycerate biosynthesis I Thicy_1580 PWY-7219 adenosine ribonucleotides de novo biosynthesis Thicy_1582 PWY-5531 chlorophyllide a biosynthesis II (anaerobic) Thicy_1582 PWY-7159 chlorophyllide a biosynthesis III (aerobic, light independent) Thicy_1595 PWY-6890 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis Thicy_1598 PWY-6891 thiazole biosynthesis II (Bacillus) Thicy_1598 PWY-6892 thiazole biosynthesis I (E. coli) Thicy_1605 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Thicy_1607 PWY-7219 adenosine ribonucleotides de novo biosynthesis Thicy_1609 PWY-7219 adenosine ribonucleotides de novo biosynthesis Thicy_1624 PWY-6700 queuosine biosynthesis Thicy_1630 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Thicy_1630 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Thicy_1631 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Thicy_1631 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Thicy_1633 PWY-4983 L-citrulline-nitric oxide cycle Thicy_1633 PWY-4984 urea cycle Thicy_1633 PWY-5 canavanine biosynthesis Thicy_1633 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Thicy_1633 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Thicy_1641 PWY-6605 adenine and adenosine salvage II Thicy_1641 PWY-6610 adenine and adenosine salvage IV Thicy_1648 PWY-5723 Rubisco shunt Thicy_1652 PWY-5531 chlorophyllide a biosynthesis II (anaerobic) Thicy_1652 PWY-7159 chlorophyllide a biosynthesis III (aerobic, light independent)