TVNIR_0060	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
TVNIR_0061	PWY-6749	CMP-legionaminate biosynthesis I
TVNIR_0062	PWY-5659	GDP-mannose biosynthesis
TVNIR_0062	PWY-6073	alginate biosynthesis I (algal)
TVNIR_0062	PWY-6082	alginate biosynthesis II (bacterial)
TVNIR_0062	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
TVNIR_0079	PWY-2941	L-lysine biosynthesis II
TVNIR_0079	PWY-2942	L-lysine biosynthesis III
TVNIR_0079	PWY-5097	L-lysine biosynthesis VI
TVNIR_0081	PWY-2941	L-lysine biosynthesis II
TVNIR_0081	PWY-5097	L-lysine biosynthesis VI
TVNIR_0087	PWY-5839	menaquinol-7 biosynthesis
TVNIR_0087	PWY-5844	menaquinol-9 biosynthesis
TVNIR_0087	PWY-5849	menaquinol-6 biosynthesis
TVNIR_0087	PWY-5890	menaquinol-10 biosynthesis
TVNIR_0087	PWY-5891	menaquinol-11 biosynthesis
TVNIR_0087	PWY-5892	menaquinol-12 biosynthesis
TVNIR_0087	PWY-5895	menaquinol-13 biosynthesis
TVNIR_0100	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
TVNIR_0100	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
TVNIR_0107	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
TVNIR_0140	PWY-4202	arsenate detoxification I (glutaredoxin)
TVNIR_0167	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
TVNIR_0167	PWY-6167	flavin biosynthesis II (archaea)
TVNIR_0167	PWY-6168	flavin biosynthesis III (fungi)
TVNIR_0171	PWY-7560	methylerythritol phosphate pathway II
TVNIR_0192	PWY-6519	8-amino-7-oxononanoate biosynthesis I
TVNIR_0193	PWY-3781	aerobic respiration I (cytochrome c)
TVNIR_0193	PWY-4521	arsenite oxidation I (respiratory)
TVNIR_0193	PWY-6692	Fe(II) oxidation
TVNIR_0193	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
TVNIR_0194	PWY-3781	aerobic respiration I (cytochrome c)
TVNIR_0194	PWY-4521	arsenite oxidation I (respiratory)
TVNIR_0194	PWY-6692	Fe(II) oxidation
TVNIR_0194	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
TVNIR_0224	PWY-1622	formaldehyde assimilation I (serine pathway)
TVNIR_0224	PWY-5392	reductive TCA cycle II
TVNIR_0224	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
TVNIR_0224	PWY-5690	TCA cycle II (plants and fungi)
TVNIR_0224	PWY-5913	TCA cycle VI (obligate autotrophs)
TVNIR_0224	PWY-6728	methylaspartate cycle
TVNIR_0224	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
TVNIR_0224	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
TVNIR_0224	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
TVNIR_0231	PWY-5941	glycogen degradation II (eukaryotic)
TVNIR_0231	PWY-622	starch biosynthesis
TVNIR_0231	PWY-6731	starch degradation III
TVNIR_0231	PWY-6737	starch degradation V
TVNIR_0231	PWY-7238	sucrose biosynthesis II
TVNIR_0232	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
TVNIR_0232	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
TVNIR_0232	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
TVNIR_0233	PWY-6123	inosine-5'-phosphate biosynthesis I
TVNIR_0233	PWY-6124	inosine-5'-phosphate biosynthesis II
TVNIR_0233	PWY-7234	inosine-5'-phosphate biosynthesis III
TVNIR_0236	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
TVNIR_0236	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
TVNIR_0239	PWY-2201	folate transformations I
TVNIR_0239	PWY-3841	folate transformations II
TVNIR_0256	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
TVNIR_0259	PWY-5674	nitrate reduction IV (dissimilatory)
TVNIR_0275	PWY-6840	homoglutathione biosynthesis
TVNIR_0275	PWY-7255	ergothioneine biosynthesis I (bacteria)
TVNIR_0297	PWY-3341	L-proline biosynthesis III
TVNIR_0297	PWY-4981	L-proline biosynthesis II (from arginine)
TVNIR_0297	PWY-6344	L-ornithine degradation II (Stickland reaction)
TVNIR_0298	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
TVNIR_0302	PWY-5686	UMP biosynthesis
TVNIR_0303	PWY-5686	UMP biosynthesis
TVNIR_0337	PWY-2201	folate transformations I
TVNIR_0337	PWY-3841	folate transformations II
TVNIR_0338	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
TVNIR_0339	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
TVNIR_0339	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
TVNIR_0340	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
TVNIR_0340	PWY-5723	Rubisco shunt
TVNIR_0340	PWY-6891	thiazole biosynthesis II (Bacillus)
TVNIR_0340	PWY-6892	thiazole biosynthesis I (E. coli)
TVNIR_0340	PWY-6901	superpathway of glucose and xylose degradation
TVNIR_0340	PWY-7560	methylerythritol phosphate pathway II
TVNIR_0341	PWY-1042	glycolysis IV (plant cytosol)
TVNIR_0341	PWY-5484	glycolysis II (from fructose 6-phosphate)
TVNIR_0341	PWY-6901	superpathway of glucose and xylose degradation
TVNIR_0341	PWY-7003	glycerol degradation to butanol
TVNIR_0342	PWY-1042	glycolysis IV (plant cytosol)
TVNIR_0342	PWY-5484	glycolysis II (from fructose 6-phosphate)
TVNIR_0342	PWY-6886	1-butanol autotrophic biosynthesis
TVNIR_0342	PWY-6901	superpathway of glucose and xylose degradation
TVNIR_0342	PWY-7003	glycerol degradation to butanol
TVNIR_0343	PWY-1042	glycolysis IV (plant cytosol)
TVNIR_0343	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
TVNIR_0343	PWY-5484	glycolysis II (from fructose 6-phosphate)
TVNIR_0343	PWY-5723	Rubisco shunt
TVNIR_0343	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
TVNIR_0343	PWY-6886	1-butanol autotrophic biosynthesis
TVNIR_0343	PWY-6901	superpathway of glucose and xylose degradation
TVNIR_0343	PWY-7003	glycerol degradation to butanol
TVNIR_0343	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
TVNIR_0343	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
TVNIR_0344	PWY-1042	glycolysis IV (plant cytosol)
TVNIR_0344	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
TVNIR_0344	PWY-5484	glycolysis II (from fructose 6-phosphate)
TVNIR_0344	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
TVNIR_0344	PWY-7385	1,3-propanediol biosynthesis (engineered)
TVNIR_0346	PWY-6123	inosine-5'-phosphate biosynthesis I
TVNIR_0346	PWY-6124	inosine-5'-phosphate biosynthesis II
TVNIR_0346	PWY-7234	inosine-5'-phosphate biosynthesis III
TVNIR_0347	PWY-6123	inosine-5'-phosphate biosynthesis I
TVNIR_0347	PWY-7234	inosine-5'-phosphate biosynthesis III
TVNIR_0352	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
TVNIR_0352	PWY-5723	Rubisco shunt
TVNIR_0353	PWY-181	photorespiration
TVNIR_0354	PWY-5958	acridone alkaloid biosynthesis
TVNIR_0354	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
TVNIR_0354	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
TVNIR_0358	PWY-5958	acridone alkaloid biosynthesis
TVNIR_0358	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
TVNIR_0358	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
TVNIR_0363	PWY-6834	spermidine biosynthesis III
TVNIR_0380	PWY-40	putrescine biosynthesis I
TVNIR_0380	PWY-43	putrescine biosynthesis II
TVNIR_0380	PWY-6305	putrescine biosynthesis IV
TVNIR_0380	PWY-6834	spermidine biosynthesis III
TVNIR_0390	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
TVNIR_0390	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
TVNIR_0393	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
TVNIR_0393	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
TVNIR_0393	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
TVNIR_0393	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
TVNIR_0402	PWY-6519	8-amino-7-oxononanoate biosynthesis I
TVNIR_0402	PWY-6578	8-amino-7-oxononanoate biosynthesis III
TVNIR_0402	PWY-7147	8-amino-7-oxononanoate biosynthesis II
TVNIR_0403	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
TVNIR_0408	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
TVNIR_0409	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
TVNIR_0409	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
TVNIR_0410	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
TVNIR_0410	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
TVNIR_0431	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
TVNIR_0431	PWY-6148	tetrahydromethanopterin biosynthesis
TVNIR_0431	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
TVNIR_0431	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
TVNIR_0432	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
TVNIR_0432	PWY-6148	tetrahydromethanopterin biosynthesis
TVNIR_0432	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
TVNIR_0432	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
TVNIR_0449	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
TVNIR_0459	PWY-5101	L-isoleucine biosynthesis II
TVNIR_0459	PWY-5103	L-isoleucine biosynthesis III
TVNIR_0459	PWY-5104	L-isoleucine biosynthesis IV
TVNIR_0459	PWY-7111	pyruvate fermentation to isobutanol (engineered)
TVNIR_0503	PWY-5057	L-valine degradation II
TVNIR_0503	PWY-5076	L-leucine degradation III
TVNIR_0503	PWY-5078	L-isoleucine degradation II
TVNIR_0503	PWY-5101	L-isoleucine biosynthesis II
TVNIR_0503	PWY-5103	L-isoleucine biosynthesis III
TVNIR_0503	PWY-5104	L-isoleucine biosynthesis IV
TVNIR_0503	PWY-5108	L-isoleucine biosynthesis V
TVNIR_0543	PWY-5316	nicotine biosynthesis
TVNIR_0543	PWY-7342	superpathway of nicotine biosynthesis
TVNIR_0551	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
TVNIR_0625	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
TVNIR_0634	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
TVNIR_0677	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
TVNIR_0680	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
TVNIR_0680	PWY-5739	GDP-D-perosamine biosynthesis
TVNIR_0680	PWY-5740	GDP-L-colitose biosynthesis
TVNIR_0680	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
TVNIR_0699	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
TVNIR_0815	PWY-7158	L-phenylalanine degradation V
TVNIR_0818	PWY-5316	nicotine biosynthesis
TVNIR_0818	PWY-7342	superpathway of nicotine biosynthesis
TVNIR_0832	PWY-6012	acyl carrier protein metabolism I
TVNIR_0832	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
TVNIR_0833	PWY-6936	seleno-amino acid biosynthesis
TVNIR_0843	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
TVNIR_0843	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
TVNIR_0859	PWY-6683	sulfate reduction III (assimilatory)
TVNIR_0860	PWY-6683	sulfate reduction III (assimilatory)
TVNIR_0870	PWY-6936	seleno-amino acid biosynthesis
TVNIR_0870	PWY-7274	D-cycloserine biosynthesis
TVNIR_0872	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
TVNIR_0872	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
TVNIR_0872	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
TVNIR_0872	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
TVNIR_0872	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
TVNIR_0872	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
TVNIR_0872	PWY-7205	CMP phosphorylation
TVNIR_0872	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
TVNIR_0872	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
TVNIR_0872	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
TVNIR_0872	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
TVNIR_0872	PWY-7224	purine deoxyribonucleosides salvage
TVNIR_0872	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
TVNIR_0872	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
TVNIR_0903	PWY-5941	glycogen degradation II (eukaryotic)
TVNIR_0903	PWY-622	starch biosynthesis
TVNIR_0903	PWY-6731	starch degradation III
TVNIR_0903	PWY-6737	starch degradation V
TVNIR_0903	PWY-7238	sucrose biosynthesis II
TVNIR_0934	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
TVNIR_0987	PWY-1042	glycolysis IV (plant cytosol)
TVNIR_0987	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
TVNIR_0987	PWY-5484	glycolysis II (from fructose 6-phosphate)
TVNIR_0987	PWY-5723	Rubisco shunt
TVNIR_0987	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
TVNIR_0987	PWY-6886	1-butanol autotrophic biosynthesis
TVNIR_0987	PWY-6901	superpathway of glucose and xylose degradation
TVNIR_0987	PWY-7003	glycerol degradation to butanol
TVNIR_0987	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
TVNIR_0987	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
TVNIR_0990	PWY-6167	flavin biosynthesis II (archaea)
TVNIR_0990	PWY-6168	flavin biosynthesis III (fungi)
TVNIR_0992	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
TVNIR_0992	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
TVNIR_0992	PWY-6896	thiamin salvage I
TVNIR_0992	PWY-6897	thiamin salvage II
TVNIR_0996	PWY-5269	cardiolipin biosynthesis II
TVNIR_0996	PWY-5668	cardiolipin biosynthesis I
TVNIR_1008	PWY-621	sucrose degradation III (sucrose invertase)
TVNIR_1036	PWY-1361	benzoyl-CoA degradation I (aerobic)
TVNIR_1036	PWY-5109	2-methylbutanoate biosynthesis
TVNIR_1036	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
TVNIR_1036	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
TVNIR_1036	PWY-5177	glutaryl-CoA degradation
TVNIR_1036	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
TVNIR_1036	PWY-6435	4-hydroxybenzoate biosynthesis V
TVNIR_1036	PWY-6583	pyruvate fermentation to butanol I
TVNIR_1036	PWY-6863	pyruvate fermentation to hexanol
TVNIR_1036	PWY-6883	pyruvate fermentation to butanol II
TVNIR_1036	PWY-6944	androstenedione degradation
TVNIR_1036	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
TVNIR_1036	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
TVNIR_1036	PWY-7007	methyl ketone biosynthesis
TVNIR_1036	PWY-7046	4-coumarate degradation (anaerobic)
TVNIR_1036	PWY-7094	fatty acid salvage
TVNIR_1036	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
TVNIR_1036	PWY-735	jasmonic acid biosynthesis
TVNIR_1036	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
TVNIR_1039	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
TVNIR_1039	PWY-5723	Rubisco shunt
TVNIR_1069	PWY-7039	phosphatidate metabolism, as a signaling molecule
TVNIR_1075	PWY-3841	folate transformations II
TVNIR_1075	PWY-6614	tetrahydrofolate biosynthesis
TVNIR_1076	PWY-3841	folate transformations II
TVNIR_1076	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
TVNIR_1076	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
TVNIR_1076	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
TVNIR_1076	PWY-7199	pyrimidine deoxyribonucleosides salvage
TVNIR_1076	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
TVNIR_1113	PWY-2661	trehalose biosynthesis V
TVNIR_1114	PWY-2661	trehalose biosynthesis V
TVNIR_1143	PWY-5674	nitrate reduction IV (dissimilatory)
TVNIR_1171	PWY-5686	UMP biosynthesis
TVNIR_1186	PWY-5381	pyridine nucleotide cycling (plants)
TVNIR_1195	PWY-622	starch biosynthesis
TVNIR_1210	PWY-6871	3-methylbutanol biosynthesis
TVNIR_1213	PWY-7396	butanol and isobutanol biosynthesis (engineered)
TVNIR_1214	PWY-2941	L-lysine biosynthesis II
TVNIR_1214	PWY-2942	L-lysine biosynthesis III
TVNIR_1214	PWY-5097	L-lysine biosynthesis VI
TVNIR_1214	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
TVNIR_1214	PWY-6559	spermidine biosynthesis II
TVNIR_1214	PWY-6562	norspermidine biosynthesis
TVNIR_1214	PWY-7153	grixazone biosynthesis
TVNIR_1214	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
TVNIR_1222	PWY-4381	fatty acid biosynthesis initiation I
TVNIR_1222	PWY-5743	3-hydroxypropanoate cycle
TVNIR_1222	PWY-5744	glyoxylate assimilation
TVNIR_1222	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
TVNIR_1222	PWY-6679	jadomycin biosynthesis
TVNIR_1222	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
TVNIR_1223	PWY-2161	folate polyglutamylation
TVNIR_1226	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
TVNIR_1226	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
TVNIR_1226	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
TVNIR_1226	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
TVNIR_1238	PWY-5676	acetyl-CoA fermentation to butanoate II
TVNIR_1238	PWY-5741	ethylmalonyl-CoA pathway
TVNIR_1238	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
TVNIR_1246	PWY-2201	folate transformations I
TVNIR_1246	PWY-5497	purine nucleobases degradation II (anaerobic)
TVNIR_1263	PWY-3781	aerobic respiration I (cytochrome c)
TVNIR_1263	PWY-4302	aerobic respiration III (alternative oxidase pathway)
TVNIR_1263	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
TVNIR_1263	PWY-5690	TCA cycle II (plants and fungi)
TVNIR_1263	PWY-6728	methylaspartate cycle
TVNIR_1263	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
TVNIR_1263	PWY-7254	TCA cycle VII (acetate-producers)
TVNIR_1263	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
TVNIR_1264	PWY-3781	aerobic respiration I (cytochrome c)
TVNIR_1264	PWY-4302	aerobic respiration III (alternative oxidase pathway)
TVNIR_1264	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
TVNIR_1264	PWY-5690	TCA cycle II (plants and fungi)
TVNIR_1264	PWY-6728	methylaspartate cycle
TVNIR_1264	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
TVNIR_1264	PWY-7254	TCA cycle VII (acetate-producers)
TVNIR_1264	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
TVNIR_1265	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
TVNIR_1265	PWY-622	starch biosynthesis
TVNIR_1268	PWY-622	starch biosynthesis
TVNIR_1270	PWY-5941	glycogen degradation II (eukaryotic)
TVNIR_1270	PWY-6724	starch degradation II
TVNIR_1270	PWY-6737	starch degradation V
TVNIR_1270	PWY-7238	sucrose biosynthesis II
TVNIR_1280	PWY-4981	L-proline biosynthesis II (from arginine)
TVNIR_1280	PWY-4984	urea cycle
TVNIR_1280	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
TVNIR_1282	PWY-6854	ethylene biosynthesis III (microbes)
TVNIR_1295	PWY-5340	sulfate activation for sulfonation
TVNIR_1307	PWY-5674	nitrate reduction IV (dissimilatory)
TVNIR_1315	PWY-4041	&gamma;-glutamyl cycle
TVNIR_1315	PWY-5826	hypoglycin biosynthesis
TVNIR_1316	PWY-6168	flavin biosynthesis III (fungi)
TVNIR_1316	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
TVNIR_1325	PWY-4261	glycerol degradation I
TVNIR_1337	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
TVNIR_1337	PWY-6853	ethylene biosynthesis II (microbes)
TVNIR_1337	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
TVNIR_1338	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
TVNIR_1338	PWY-6853	ethylene biosynthesis II (microbes)
TVNIR_1338	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
TVNIR_1359	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
TVNIR_1362	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
TVNIR_1375	PWY-4381	fatty acid biosynthesis initiation I
TVNIR_1379	PWY-5269	cardiolipin biosynthesis II
TVNIR_1379	PWY-5668	cardiolipin biosynthesis I
TVNIR_1380	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
TVNIR_1380	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
TVNIR_1380	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
TVNIR_1415	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
TVNIR_1415	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
TVNIR_1415	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
TVNIR_1415	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
TVNIR_1415	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
TVNIR_1415	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
TVNIR_1415	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
TVNIR_1415	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
TVNIR_1415	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
TVNIR_1415	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
TVNIR_1417	PWY-4261	glycerol degradation I
TVNIR_1418	PWY-6700	queuosine biosynthesis
TVNIR_1445	PWY-3781	aerobic respiration I (cytochrome c)
TVNIR_1445	PWY-4302	aerobic respiration III (alternative oxidase pathway)
TVNIR_1445	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
TVNIR_1445	PWY-5690	TCA cycle II (plants and fungi)
TVNIR_1445	PWY-6728	methylaspartate cycle
TVNIR_1445	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
TVNIR_1445	PWY-7254	TCA cycle VII (acetate-producers)
TVNIR_1445	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
TVNIR_1446	PWY-3781	aerobic respiration I (cytochrome c)
TVNIR_1446	PWY-4302	aerobic respiration III (alternative oxidase pathway)
TVNIR_1446	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
TVNIR_1446	PWY-5690	TCA cycle II (plants and fungi)
TVNIR_1446	PWY-6728	methylaspartate cycle
TVNIR_1446	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
TVNIR_1446	PWY-7254	TCA cycle VII (acetate-producers)
TVNIR_1446	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
TVNIR_1448	PWY-6749	CMP-legionaminate biosynthesis I
TVNIR_1456	PWY-2941	L-lysine biosynthesis II
TVNIR_1456	PWY-2942	L-lysine biosynthesis III
TVNIR_1456	PWY-5097	L-lysine biosynthesis VI
TVNIR_1456	PWY-6559	spermidine biosynthesis II
TVNIR_1456	PWY-6562	norspermidine biosynthesis
TVNIR_1456	PWY-7153	grixazone biosynthesis
TVNIR_1507	PWY-5484	glycolysis II (from fructose 6-phosphate)
TVNIR_1510	PWY-5686	UMP biosynthesis
TVNIR_1522	PWY-181	photorespiration
TVNIR_1523	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
TVNIR_1523	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
TVNIR_1523	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
TVNIR_1523	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
TVNIR_1523	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
TVNIR_1523	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
TVNIR_1523	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
TVNIR_1523	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
TVNIR_1523	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
TVNIR_1523	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
TVNIR_1528	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
TVNIR_1528	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
TVNIR_1535	PWY-5988	wound-induced proteolysis I
TVNIR_1535	PWY-6018	seed germination protein turnover
TVNIR_1539	PWY-5674	nitrate reduction IV (dissimilatory)
TVNIR_1543	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
TVNIR_1554	PWY-3781	aerobic respiration I (cytochrome c)
TVNIR_1554	PWY-4521	arsenite oxidation I (respiratory)
TVNIR_1554	PWY-6692	Fe(II) oxidation
TVNIR_1554	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
TVNIR_1570	PWY-6123	inosine-5'-phosphate biosynthesis I
TVNIR_1570	PWY-6124	inosine-5'-phosphate biosynthesis II
TVNIR_1570	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
TVNIR_1570	PWY-7234	inosine-5'-phosphate biosynthesis III
TVNIR_1571	PWY-5392	reductive TCA cycle II
TVNIR_1571	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
TVNIR_1571	PWY-5690	TCA cycle II (plants and fungi)
TVNIR_1571	PWY-5913	TCA cycle VI (obligate autotrophs)
TVNIR_1571	PWY-6728	methylaspartate cycle
TVNIR_1571	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
TVNIR_1571	PWY-7254	TCA cycle VII (acetate-producers)
TVNIR_1571	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
TVNIR_1576	PWY-5913	TCA cycle VI (obligate autotrophs)
TVNIR_1576	PWY-6549	L-glutamine biosynthesis III
TVNIR_1576	PWY-6728	methylaspartate cycle
TVNIR_1576	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
TVNIR_1576	PWY-7124	ethylene biosynthesis V (engineered)
TVNIR_1576	PWY-7254	TCA cycle VII (acetate-producers)
TVNIR_1576	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
TVNIR_1580	PWY-4381	fatty acid biosynthesis initiation I
TVNIR_1580	PWY-6799	fatty acid biosynthesis (plant mitochondria)
TVNIR_1580	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
TVNIR_1581	PWY-5367	petroselinate biosynthesis
TVNIR_1581	PWY-5971	palmitate biosynthesis II (bacteria and plants)
TVNIR_1581	PWY-5973	<i>cis</i>-vaccenate biosynthesis
TVNIR_1581	PWY-5989	stearate biosynthesis II (bacteria and plants)
TVNIR_1581	PWY-5994	palmitate biosynthesis I (animals and fungi)
TVNIR_1581	PWY-6113	superpathway of mycolate biosynthesis
TVNIR_1581	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
TVNIR_1581	PWY-6519	8-amino-7-oxononanoate biosynthesis I
TVNIR_1581	PWY-6951	TVNIR_1581|fabG
TVNIR_1581	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
TVNIR_1581	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
TVNIR_1581	PWYG-321	mycolate biosynthesis
TVNIR_1584	PWY-5958	acridone alkaloid biosynthesis
TVNIR_1584	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
TVNIR_1584	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
TVNIR_1587	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
TVNIR_1587	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
TVNIR_1587	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
TVNIR_1587	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
TVNIR_1587	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
TVNIR_1587	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
TVNIR_1608	PWY-6902	chitin degradation II
TVNIR_1638	PWY-6748	nitrate reduction VII (denitrification)
TVNIR_1638	PWY-7084	nitrifier denitrification
TVNIR_1656	PWY-3781	aerobic respiration I (cytochrome c)
TVNIR_1656	PWY-4521	arsenite oxidation I (respiratory)
TVNIR_1656	PWY-6692	Fe(II) oxidation
TVNIR_1656	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
TVNIR_1660	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
TVNIR_1660	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
TVNIR_1660	PWY-5901	2,3-dihydroxybenzoate biosynthesis
TVNIR_1660	PWY-6406	salicylate biosynthesis I
TVNIR_1661	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
TVNIR_1661	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
TVNIR_1663	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
TVNIR_1663	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
TVNIR_1664	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
TVNIR_1664	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
TVNIR_1676	PWY-6823	molybdenum cofactor biosynthesis
TVNIR_1676	PWY-6891	thiazole biosynthesis II (Bacillus)
TVNIR_1676	PWY-6892	thiazole biosynthesis I (E. coli)
TVNIR_1676	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
TVNIR_1681	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
TVNIR_1681	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
TVNIR_1681	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
TVNIR_1686	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TVNIR_1686	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
TVNIR_1766	PWY-6683	sulfate reduction III (assimilatory)
TVNIR_1767	PWY-6683	sulfate reduction III (assimilatory)
TVNIR_1799	PWY-6167	flavin biosynthesis II (archaea)
TVNIR_1801	PWY-3801	sucrose degradation II (sucrose synthase)
TVNIR_1801	PWY-6527	stachyose degradation
TVNIR_1801	PWY-6981	chitin biosynthesis
TVNIR_1801	PWY-7238	sucrose biosynthesis II
TVNIR_1801	PWY-7343	UDP-glucose biosynthesis
TVNIR_1803	PWY-5686	UMP biosynthesis
TVNIR_1807	PWY-7205	CMP phosphorylation
TVNIR_1808	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
TVNIR_1809	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
TVNIR_1811	PWY-3461	L-tyrosine biosynthesis II
TVNIR_1811	PWY-3462	L-phenylalanine biosynthesis II
TVNIR_1811	PWY-6120	L-tyrosine biosynthesis III
TVNIR_1811	PWY-6627	salinosporamide A biosynthesis
TVNIR_1811	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
TVNIR_1815	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
TVNIR_1815	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
TVNIR_1821	PWY-43	putrescine biosynthesis II
TVNIR_1832	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
TVNIR_1832	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
TVNIR_1832	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
TVNIR_1835	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
TVNIR_1835	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
TVNIR_1883	PWY-7560	methylerythritol phosphate pathway II
TVNIR_1885	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
TVNIR_1885	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
TVNIR_1886	PWY-7560	methylerythritol phosphate pathway II
TVNIR_1888	PWY-1042	glycolysis IV (plant cytosol)
TVNIR_1888	PWY-1622	formaldehyde assimilation I (serine pathway)
TVNIR_1888	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
TVNIR_1888	PWY-5484	glycolysis II (from fructose 6-phosphate)
TVNIR_1888	PWY-5723	Rubisco shunt
TVNIR_1888	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
TVNIR_1888	PWY-6886	1-butanol autotrophic biosynthesis
TVNIR_1888	PWY-6901	superpathway of glucose and xylose degradation
TVNIR_1888	PWY-7003	glycerol degradation to butanol
TVNIR_1888	PWY-7124	ethylene biosynthesis V (engineered)
TVNIR_1888	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
TVNIR_1889	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
TVNIR_1889	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
TVNIR_1890	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
TVNIR_1890	PWY-7177	UTP and CTP dephosphorylation II
TVNIR_1890	PWY-7185	UTP and CTP dephosphorylation I
TVNIR_1892	PWY-4381	fatty acid biosynthesis initiation I
TVNIR_1892	PWY-5743	3-hydroxypropanoate cycle
TVNIR_1892	PWY-5744	glyoxylate assimilation
TVNIR_1892	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
TVNIR_1892	PWY-6679	jadomycin biosynthesis
TVNIR_1892	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
TVNIR_1900	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
TVNIR_1900	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
TVNIR_1900	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
TVNIR_1927	PWY-3221	dTDP-L-rhamnose biosynthesis II
TVNIR_1927	PWY-6808	dTDP-D-forosamine biosynthesis
TVNIR_1927	PWY-6942	dTDP-D-desosamine biosynthesis
TVNIR_1927	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
TVNIR_1927	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
TVNIR_1927	PWY-6974	dTDP-L-olivose biosynthesis
TVNIR_1927	PWY-6976	dTDP-L-mycarose biosynthesis
TVNIR_1927	PWY-7104	dTDP-L-megosamine biosynthesis
TVNIR_1927	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
TVNIR_1927	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
TVNIR_1927	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
TVNIR_1927	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
TVNIR_1927	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
TVNIR_1927	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
TVNIR_1927	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
TVNIR_1927	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
TVNIR_1928	PWY-3221	dTDP-L-rhamnose biosynthesis II
TVNIR_1928	PWY-6808	dTDP-D-forosamine biosynthesis
TVNIR_1928	PWY-6942	dTDP-D-desosamine biosynthesis
TVNIR_1928	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
TVNIR_1928	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
TVNIR_1928	PWY-6974	dTDP-L-olivose biosynthesis
TVNIR_1928	PWY-6976	dTDP-L-mycarose biosynthesis
TVNIR_1928	PWY-7104	dTDP-L-megosamine biosynthesis
TVNIR_1928	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
TVNIR_1928	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
TVNIR_1928	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
TVNIR_1928	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
TVNIR_1928	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
TVNIR_1928	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
TVNIR_1928	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
TVNIR_1928	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
TVNIR_1958	PWY-5941	glycogen degradation II (eukaryotic)
TVNIR_1958	PWY-622	starch biosynthesis
TVNIR_1958	PWY-6731	starch degradation III
TVNIR_1958	PWY-6737	starch degradation V
TVNIR_1958	PWY-7238	sucrose biosynthesis II
TVNIR_1961	PWY-5971	palmitate biosynthesis II (bacteria and plants)
TVNIR_1961	PWY-5973	<i>cis</i>-vaccenate biosynthesis
TVNIR_1961	PWY-5989	stearate biosynthesis II (bacteria and plants)
TVNIR_1961	PWY-5994	palmitate biosynthesis I (animals and fungi)
TVNIR_1961	PWY-6113	superpathway of mycolate biosynthesis
TVNIR_1961	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
TVNIR_1961	PWY-6519	8-amino-7-oxononanoate biosynthesis I
TVNIR_1961	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
TVNIR_1961	PWYG-321	mycolate biosynthesis
TVNIR_1966	PWY-7560	methylerythritol phosphate pathway II
TVNIR_2009	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
TVNIR_2017	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TVNIR_2017	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
TVNIR_2020	PWY-5674	nitrate reduction IV (dissimilatory)
TVNIR_2061	PWY-5839	menaquinol-7 biosynthesis
TVNIR_2061	PWY-5851	demethylmenaquinol-9 biosynthesis
TVNIR_2061	PWY-5852	demethylmenaquinol-8 biosynthesis I
TVNIR_2061	PWY-5853	demethylmenaquinol-6 biosynthesis I
TVNIR_2061	PWY-5890	menaquinol-10 biosynthesis
TVNIR_2061	PWY-5891	menaquinol-11 biosynthesis
TVNIR_2061	PWY-5892	menaquinol-12 biosynthesis
TVNIR_2061	PWY-5895	menaquinol-13 biosynthesis
TVNIR_2067	PWY-3961	phosphopantothenate biosynthesis II
TVNIR_2068	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
TVNIR_2068	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
TVNIR_2124	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
TVNIR_2175	PWY-5344	L-homocysteine biosynthesis
TVNIR_2175	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
TVNIR_2177	PWY-3781	aerobic respiration I (cytochrome c)
TVNIR_2177	PWY-4521	arsenite oxidation I (respiratory)
TVNIR_2177	PWY-6692	Fe(II) oxidation
TVNIR_2177	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
TVNIR_2178	PWY-3781	aerobic respiration I (cytochrome c)
TVNIR_2178	PWY-4521	arsenite oxidation I (respiratory)
TVNIR_2178	PWY-6692	Fe(II) oxidation
TVNIR_2178	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
TVNIR_2196	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
TVNIR_2196	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
TVNIR_2196	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
TVNIR_2197	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
TVNIR_2197	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
TVNIR_2200	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
TVNIR_2200	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
TVNIR_2210	PWY-2723	trehalose degradation V
TVNIR_2210	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
TVNIR_2210	PWY-5661	GDP-glucose biosynthesis
TVNIR_2210	PWY-7238	sucrose biosynthesis II
TVNIR_2210	PWY-7385	1,3-propanediol biosynthesis (engineered)
TVNIR_2237	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TVNIR_2237	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
TVNIR_2238	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TVNIR_2238	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
TVNIR_2240	PWY-6728	methylaspartate cycle
TVNIR_2240	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
TVNIR_2240	PWY-7118	chitin degradation to ethanol
TVNIR_2240	PWY-7294	xylose degradation IV
TVNIR_2240	PWY-7295	L-arabinose degradation IV
TVNIR_2242	PWY-5481	pyruvate fermentation to lactate
TVNIR_2242	PWY-6901	superpathway of glucose and xylose degradation
TVNIR_2247	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
TVNIR_2249	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TVNIR_2249	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
TVNIR_2250	PWY-2301	<i>myo</i>-inositol biosynthesis
TVNIR_2250	PWY-4702	phytate degradation I
TVNIR_2250	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
TVNIR_2254	PWY-6700	queuosine biosynthesis
TVNIR_2255	PWY-6700	queuosine biosynthesis
TVNIR_2294	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
TVNIR_2294	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
TVNIR_2294	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
TVNIR_2294	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
TVNIR_2333	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
TVNIR_2333	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
TVNIR_2333	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
TVNIR_2333	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
TVNIR_2333	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
TVNIR_2333	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
TVNIR_2333	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
TVNIR_2333	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
TVNIR_2334	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
TVNIR_2334	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
TVNIR_2334	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
TVNIR_2334	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
TVNIR_2334	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
TVNIR_2334	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
TVNIR_2334	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
TVNIR_2334	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
TVNIR_2339	PWY-5316	nicotine biosynthesis
TVNIR_2339	PWY-5381	pyridine nucleotide cycling (plants)
TVNIR_2339	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
TVNIR_2339	PWY-7342	superpathway of nicotine biosynthesis
TVNIR_2372	PWY-5971	palmitate biosynthesis II (bacteria and plants)
TVNIR_2372	PWY-5973	<i>cis</i>-vaccenate biosynthesis
TVNIR_2372	PWY-5989	stearate biosynthesis II (bacteria and plants)
TVNIR_2372	PWY-5994	palmitate biosynthesis I (animals and fungi)
TVNIR_2372	PWY-6113	superpathway of mycolate biosynthesis
TVNIR_2372	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
TVNIR_2372	PWY-6519	8-amino-7-oxononanoate biosynthesis I
TVNIR_2372	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
TVNIR_2372	PWYG-321	mycolate biosynthesis
TVNIR_2373	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
TVNIR_2376	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
TVNIR_2405	PWY-5663	tetrahydrobiopterin biosynthesis I
TVNIR_2405	PWY-5664	tetrahydrobiopterin biosynthesis II
TVNIR_2405	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
TVNIR_2405	PWY-6703	preQ<sub>0</sub> biosynthesis
TVNIR_2405	PWY-6983	tetrahydrobiopterin biosynthesis III
TVNIR_2405	PWY-7442	drosopterin and aurodrosopterin biosynthesis
TVNIR_2414	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
TVNIR_2420	PWY-6683	sulfate reduction III (assimilatory)
TVNIR_2465	PWY-5692	allantoin degradation to glyoxylate II
TVNIR_2465	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
TVNIR_2486	PWY-5381	pyridine nucleotide cycling (plants)
TVNIR_2486	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
TVNIR_2487	PWY-5392	reductive TCA cycle II
TVNIR_2487	PWY-5537	pyruvate fermentation to acetate V
TVNIR_2487	PWY-5538	pyruvate fermentation to acetate VI
TVNIR_2487	PWY-5690	TCA cycle II (plants and fungi)
TVNIR_2487	PWY-5913	TCA cycle VI (obligate autotrophs)
TVNIR_2487	PWY-6728	methylaspartate cycle
TVNIR_2487	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
TVNIR_2487	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
TVNIR_2488	PWY-5392	reductive TCA cycle II
TVNIR_2488	PWY-5537	pyruvate fermentation to acetate V
TVNIR_2488	PWY-5538	pyruvate fermentation to acetate VI
TVNIR_2488	PWY-5690	TCA cycle II (plants and fungi)
TVNIR_2488	PWY-5913	TCA cycle VI (obligate autotrophs)
TVNIR_2488	PWY-6728	methylaspartate cycle
TVNIR_2488	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
TVNIR_2488	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
TVNIR_2520	PWY-5381	pyridine nucleotide cycling (plants)
TVNIR_2520	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
TVNIR_2527	PWY-5941	glycogen degradation II (eukaryotic)
TVNIR_2527	PWY-622	starch biosynthesis
TVNIR_2527	PWY-6731	starch degradation III
TVNIR_2527	PWY-6737	starch degradation V
TVNIR_2527	PWY-7238	sucrose biosynthesis II
TVNIR_2529	PWY-4261	glycerol degradation I
TVNIR_2529	PWY-6118	glycerol-3-phosphate shuttle
TVNIR_2529	PWY-6952	glycerophosphodiester degradation
TVNIR_2593	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
TVNIR_2593	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
TVNIR_2593	PWY-6897	thiamin salvage II
TVNIR_2593	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
TVNIR_2593	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
TVNIR_2593	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
TVNIR_2593	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
TVNIR_2594	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
TVNIR_2601	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TVNIR_2601	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
TVNIR_2602	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TVNIR_2602	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
TVNIR_2603	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TVNIR_2603	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
TVNIR_2604	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
TVNIR_2604	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
TVNIR_2604	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
TVNIR_2604	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
TVNIR_2606	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TVNIR_2606	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
TVNIR_2607	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
TVNIR_2607	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
TVNIR_2607	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
TVNIR_2608	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TVNIR_2608	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
TVNIR_2618	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TVNIR_2618	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
TVNIR_2622	PWY-3781	aerobic respiration I (cytochrome c)
TVNIR_2622	PWY-6692	Fe(II) oxidation
TVNIR_2622	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
TVNIR_2622	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
TVNIR_2623	PWY-5663	tetrahydrobiopterin biosynthesis I
TVNIR_2623	PWY-5664	tetrahydrobiopterin biosynthesis II
TVNIR_2623	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
TVNIR_2623	PWY-6703	preQ<sub>0</sub> biosynthesis
TVNIR_2623	PWY-6983	tetrahydrobiopterin biosynthesis III
TVNIR_2623	PWY-7442	drosopterin and aurodrosopterin biosynthesis
TVNIR_2627	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
TVNIR_2627	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
TVNIR_2627	PWY-6164	3-dehydroquinate biosynthesis I
TVNIR_2629	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TVNIR_2629	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
TVNIR_2638	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
TVNIR_2638	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
TVNIR_2656	PWY-4983	L-citrulline-nitric oxide cycle
TVNIR_2656	PWY-4984	urea cycle
TVNIR_2656	PWY-5	canavanine biosynthesis
TVNIR_2656	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
TVNIR_2656	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
TVNIR_2664	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
TVNIR_2664	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
TVNIR_2666	PWY-6891	thiazole biosynthesis II (Bacillus)
TVNIR_2666	PWY-6892	thiazole biosynthesis I (E. coli)
TVNIR_2666	PWY-7560	methylerythritol phosphate pathway II
TVNIR_2674	PWY-7560	methylerythritol phosphate pathway II
TVNIR_2677	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
TVNIR_2684	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
TVNIR_2698	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
TVNIR_2716	PWY-5194	siroheme biosynthesis
TVNIR_2716	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
TVNIR_2729	PWY-5971	palmitate biosynthesis II (bacteria and plants)
TVNIR_2729	PWY-5973	<i>cis</i>-vaccenate biosynthesis
TVNIR_2729	PWY-5989	stearate biosynthesis II (bacteria and plants)
TVNIR_2729	PWY-6113	superpathway of mycolate biosynthesis
TVNIR_2729	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
TVNIR_2729	PWY-6519	8-amino-7-oxononanoate biosynthesis I
TVNIR_2729	PWY-7096	triclosan resistance
TVNIR_2729	PWYG-321	mycolate biosynthesis
TVNIR_2750	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
TVNIR_2778	PWY-2781	<i>cis</i>-zeatin biosynthesis
TVNIR_2782	PWY-6938	NADH repair
TVNIR_2790	PWY-5964	guanylyl molybdenum cofactor biosynthesis
TVNIR_2792	PWY-6823	molybdenum cofactor biosynthesis
TVNIR_2808	PWY-3801	sucrose degradation II (sucrose synthase)
TVNIR_2808	PWY-5054	sorbitol biosynthesis I
TVNIR_2808	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
TVNIR_2808	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
TVNIR_2808	PWY-5659	GDP-mannose biosynthesis
TVNIR_2808	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
TVNIR_2808	PWY-621	sucrose degradation III (sucrose invertase)
TVNIR_2808	PWY-622	starch biosynthesis
TVNIR_2808	PWY-6531	mannitol cycle
TVNIR_2808	PWY-6981	chitin biosynthesis
TVNIR_2808	PWY-7238	sucrose biosynthesis II
TVNIR_2808	PWY-7347	sucrose biosynthesis III
TVNIR_2808	PWY-7385	1,3-propanediol biosynthesis (engineered)
TVNIR_2809	PWY-622	starch biosynthesis
TVNIR_2810	PWY-1622	formaldehyde assimilation I (serine pathway)
TVNIR_2810	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
TVNIR_2810	PWY-5913	TCA cycle VI (obligate autotrophs)
TVNIR_2810	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
TVNIR_2810	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
TVNIR_2810	PWY-6549	L-glutamine biosynthesis III
TVNIR_2810	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
TVNIR_2810	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
TVNIR_2810	PWY-7124	ethylene biosynthesis V (engineered)
TVNIR_2811	PWY-5155	&beta;-alanine biosynthesis III
TVNIR_2813	PWY-6654	phosphopantothenate biosynthesis III
TVNIR_2815	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
TVNIR_2815	PWY-6148	tetrahydromethanopterin biosynthesis
TVNIR_2815	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
TVNIR_2815	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
TVNIR_2825	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
TVNIR_2826	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
TVNIR_2826	PWY-6855	chitin degradation I (archaea)
TVNIR_2826	PWY-6906	chitin derivatives degradation
TVNIR_2848	PWY-5839	menaquinol-7 biosynthesis
TVNIR_2848	PWY-5844	menaquinol-9 biosynthesis
TVNIR_2848	PWY-5849	menaquinol-6 biosynthesis
TVNIR_2848	PWY-5890	menaquinol-10 biosynthesis
TVNIR_2848	PWY-5891	menaquinol-11 biosynthesis
TVNIR_2848	PWY-5892	menaquinol-12 biosynthesis
TVNIR_2848	PWY-5895	menaquinol-13 biosynthesis
TVNIR_2872	PWY-7560	methylerythritol phosphate pathway II
TVNIR_2873	PWY-6167	flavin biosynthesis II (archaea)
TVNIR_2873	PWY-6168	flavin biosynthesis III (fungi)
TVNIR_2873	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
TVNIR_2875	PWY-6167	flavin biosynthesis II (archaea)
TVNIR_2875	PWY-6168	flavin biosynthesis III (fungi)
TVNIR_2875	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
TVNIR_2878	PWY-1622	formaldehyde assimilation I (serine pathway)
TVNIR_2878	PWY-181	photorespiration
TVNIR_2878	PWY-2161	folate polyglutamylation
TVNIR_2878	PWY-2201	folate transformations I
TVNIR_2878	PWY-3661	glycine betaine degradation I
TVNIR_2878	PWY-3661-1	glycine betaine degradation II (mammalian)
TVNIR_2878	PWY-3841	folate transformations II
TVNIR_2878	PWY-5497	purine nucleobases degradation II (anaerobic)
TVNIR_2885	PWY-6832	2-aminoethylphosphonate degradation II
TVNIR_2898	PWY-5101	L-isoleucine biosynthesis II
TVNIR_2898	PWY-5103	L-isoleucine biosynthesis III
TVNIR_2898	PWY-5104	L-isoleucine biosynthesis IV
TVNIR_2898	PWY-7111	pyruvate fermentation to isobutanol (engineered)
TVNIR_2915	PWY-5392	reductive TCA cycle II
TVNIR_2915	PWY-5537	pyruvate fermentation to acetate V
TVNIR_2915	PWY-5538	pyruvate fermentation to acetate VI
TVNIR_2915	PWY-5690	TCA cycle II (plants and fungi)
TVNIR_2915	PWY-5913	TCA cycle VI (obligate autotrophs)
TVNIR_2915	PWY-6728	methylaspartate cycle
TVNIR_2915	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
TVNIR_2915	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
TVNIR_2933	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TVNIR_2933	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
TVNIR_2959	PWY-5381	pyridine nucleotide cycling (plants)
TVNIR_2959	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
TVNIR_2959	PWY-6596	adenosine nucleotides degradation I
TVNIR_2959	PWY-6606	guanosine nucleotides degradation II
TVNIR_2959	PWY-6607	guanosine nucleotides degradation I
TVNIR_2959	PWY-6608	guanosine nucleotides degradation III
TVNIR_2959	PWY-7185	UTP and CTP dephosphorylation I
TVNIR_2967	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
TVNIR_2967	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
TVNIR_2967	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
TVNIR_2967	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
TVNIR_2981	PWY-7158	L-phenylalanine degradation V
TVNIR_2991	PWY-5532	adenosine nucleotides degradation IV
TVNIR_2991	PWY-5723	Rubisco shunt
TVNIR_2992	PWY-5532	adenosine nucleotides degradation IV
TVNIR_2992	PWY-5723	Rubisco shunt
TVNIR_3003	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
TVNIR_3003	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
TVNIR_3003	PWY-6936	seleno-amino acid biosynthesis
TVNIR_3003	PWY-702	L-methionine biosynthesis II
TVNIR_3026	PWY-3781	aerobic respiration I (cytochrome c)
TVNIR_3026	PWY-4521	arsenite oxidation I (respiratory)
TVNIR_3026	PWY-6692	Fe(II) oxidation
TVNIR_3026	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
TVNIR_3038	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
TVNIR_3038	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
TVNIR_3070	PWY-1042	glycolysis IV (plant cytosol)
TVNIR_3070	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
TVNIR_3070	PWY-5484	glycolysis II (from fructose 6-phosphate)
TVNIR_3070	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
TVNIR_3070	PWY-7385	1,3-propanediol biosynthesis (engineered)
TVNIR_3072	PWY-5101	L-isoleucine biosynthesis II
TVNIR_3072	PWY-5103	L-isoleucine biosynthesis III
TVNIR_3072	PWY-5104	L-isoleucine biosynthesis IV
TVNIR_3072	PWY-7111	pyruvate fermentation to isobutanol (engineered)
TVNIR_3084	PWY-6823	molybdenum cofactor biosynthesis
TVNIR_3084	PWY-6891	thiazole biosynthesis II (Bacillus)
TVNIR_3084	PWY-6892	thiazole biosynthesis I (E. coli)
TVNIR_3084	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
TVNIR_3085	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
TVNIR_3086	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
TVNIR_3086	PWY-6596	adenosine nucleotides degradation I
TVNIR_3086	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
TVNIR_3100	PWY-6672	<i>cis</i>-genanyl-CoA degradation
TVNIR_3100	PWY-7118	chitin degradation to ethanol
TVNIR_3114	PWY-3781	aerobic respiration I (cytochrome c)
TVNIR_3114	PWY-4302	aerobic respiration III (alternative oxidase pathway)
TVNIR_3114	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
TVNIR_3114	PWY-6692	Fe(II) oxidation
TVNIR_3128	PWY-1042	glycolysis IV (plant cytosol)
TVNIR_3128	PWY-5484	glycolysis II (from fructose 6-phosphate)
TVNIR_3128	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
TVNIR_3128	PWY-7003	glycerol degradation to butanol
TVNIR_3129	PWY-6749	CMP-legionaminate biosynthesis I
TVNIR_3130	PWY-6614	tetrahydrofolate biosynthesis
TVNIR_3135	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
TVNIR_3135	PWY-5686	UMP biosynthesis
TVNIR_3135	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
TVNIR_3136	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
TVNIR_3136	PWY-5686	UMP biosynthesis
TVNIR_3136	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
TVNIR_3138	PWY-2941	L-lysine biosynthesis II
TVNIR_3138	PWY-2942	L-lysine biosynthesis III
TVNIR_3138	PWY-5097	L-lysine biosynthesis VI
TVNIR_3140	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
TVNIR_3143	PWY-5669	phosphatidylethanolamine biosynthesis I
TVNIR_3154	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
TVNIR_3154	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
TVNIR_3154	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
TVNIR_3180	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
TVNIR_3180	PWY-2201	folate transformations I
TVNIR_3180	PWY-3841	folate transformations II
TVNIR_3180	PWY-5030	L-histidine degradation III
TVNIR_3180	PWY-5497	purine nucleobases degradation II (anaerobic)
TVNIR_3180	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
TVNIR_3202	PWY-5988	wound-induced proteolysis I
TVNIR_3202	PWY-6018	seed germination protein turnover
TVNIR_3208	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
TVNIR_3208	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
TVNIR_3220	PWY-6871	3-methylbutanol biosynthesis
TVNIR_3221	PWY-5669	phosphatidylethanolamine biosynthesis I
TVNIR_3223	PWY-5101	L-isoleucine biosynthesis II
TVNIR_3223	PWY-5103	L-isoleucine biosynthesis III
TVNIR_3223	PWY-5104	L-isoleucine biosynthesis IV
TVNIR_3223	PWY-7111	pyruvate fermentation to isobutanol (engineered)
TVNIR_3224	PWY-5101	L-isoleucine biosynthesis II
TVNIR_3224	PWY-5103	L-isoleucine biosynthesis III
TVNIR_3224	PWY-5104	L-isoleucine biosynthesis IV
TVNIR_3224	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
TVNIR_3224	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
TVNIR_3224	PWY-6389	(<i>S</i>)-acetoin biosynthesis
TVNIR_3224	PWY-7111	pyruvate fermentation to isobutanol (engineered)
TVNIR_3225	PWY-5101	L-isoleucine biosynthesis II
TVNIR_3225	PWY-5103	L-isoleucine biosynthesis III
TVNIR_3225	PWY-5104	L-isoleucine biosynthesis IV
TVNIR_3225	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
TVNIR_3225	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
TVNIR_3225	PWY-6389	(<i>S</i>)-acetoin biosynthesis
TVNIR_3225	PWY-7111	pyruvate fermentation to isobutanol (engineered)
TVNIR_3231	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
TVNIR_3231	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
TVNIR_3255	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
TVNIR_3263	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
TVNIR_3269	PWY-4061	glutathione-mediated detoxification I
TVNIR_3269	PWY-6842	glutathione-mediated detoxification II
TVNIR_3269	PWY-7112	4-hydroxy-2-nonenal detoxification
TVNIR_3269	PWY-7533	gliotoxin biosynthesis
TVNIR_3327	PWY-5941	glycogen degradation II (eukaryotic)
TVNIR_3327	PWY-6724	starch degradation II
TVNIR_3327	PWY-6737	starch degradation V
TVNIR_3327	PWY-7238	sucrose biosynthesis II
TVNIR_3340	PWY-5747	2-methylcitrate cycle II
TVNIR_3365	PWY-6703	preQ<sub>0</sub> biosynthesis
TVNIR_3366	PWY-6703	preQ<sub>0</sub> biosynthesis
TVNIR_3393	PWY-4202	arsenate detoxification I (glutaredoxin)
TVNIR_3393	PWY-4621	arsenate detoxification II (glutaredoxin)
TVNIR_3394	PWY-6785	hydrogen production VIII
TVNIR_3397	PWY-5269	cardiolipin biosynthesis II
TVNIR_3397	PWY-5668	cardiolipin biosynthesis I
TVNIR_3399	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
TVNIR_3399	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
TVNIR_3399	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
TVNIR_3400	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
TVNIR_3400	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
TVNIR_3422	PWY-6829	tRNA methylation (yeast)
TVNIR_3422	PWY-7285	methylwyosine biosynthesis
TVNIR_3422	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
TVNIR_3435	PWY-6891	thiazole biosynthesis II (Bacillus)
TVNIR_3435	PWY-6892	thiazole biosynthesis I (E. coli)
TVNIR_3435	PWY-7560	methylerythritol phosphate pathway II
TVNIR_3439	PWY-2941	L-lysine biosynthesis II
TVNIR_3439	PWY-2942	L-lysine biosynthesis III
TVNIR_3439	PWY-5097	L-lysine biosynthesis VI
TVNIR_3446	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
TVNIR_3446	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
TVNIR_3452	PWY-6910	hydroxymethylpyrimidine salvage
TVNIR_3452	PWY-7356	thiamin salvage IV (yeast)
TVNIR_3452	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
TVNIR_3453	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
TVNIR_3453	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
TVNIR_3453	PWY-6897	thiamin salvage II
TVNIR_3453	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
TVNIR_3453	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
TVNIR_3453	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
TVNIR_3453	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
TVNIR_3454	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
TVNIR_3465	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
TVNIR_3476	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
TVNIR_3476	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
TVNIR_3479	PWY-6164	3-dehydroquinate biosynthesis I
TVNIR_3485	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
TVNIR_3485	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
TVNIR_3485	PWY-6269	adenosylcobalamin salvage from cobinamide II
TVNIR_3487	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
TVNIR_3487	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
TVNIR_3487	PWY-6269	adenosylcobalamin salvage from cobinamide II
TVNIR_3488	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
TVNIR_3488	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
TVNIR_3488	PWY-6269	adenosylcobalamin salvage from cobinamide II
TVNIR_3490	PWY-5443	aminopropanol phosphate biosynthesis I
TVNIR_3492	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
TVNIR_3492	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
TVNIR_3492	PWY-6268	adenosylcobalamin salvage from cobalamin
TVNIR_3492	PWY-6269	adenosylcobalamin salvage from cobinamide II
TVNIR_3528	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
TVNIR_3528	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
TVNIR_3528	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
TVNIR_3528	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
TVNIR_3560	PWY-5484	glycolysis II (from fructose 6-phosphate)
TVNIR_3567	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
TVNIR_3567	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
TVNIR_3567	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
TVNIR_3567	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
TVNIR_3567	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
TVNIR_3567	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
TVNIR_3567	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
TVNIR_3567	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
TVNIR_3568	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
TVNIR_3568	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
TVNIR_3568	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
TVNIR_3568	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
TVNIR_3568	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
TVNIR_3568	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
TVNIR_3568	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
TVNIR_3568	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
TVNIR_3570	PWY-6749	CMP-legionaminate biosynthesis I
TVNIR_3594	PWY-6823	molybdenum cofactor biosynthesis
TVNIR_3601	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
TVNIR_3605	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
TVNIR_3614	PWY-5278	sulfite oxidation III
TVNIR_3614	PWY-5340	sulfate activation for sulfonation
TVNIR_3614	PWY-6683	sulfate reduction III (assimilatory)
TVNIR_3614	PWY-6932	selenate reduction
TVNIR_3622	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
TVNIR_3623	PWY-1042	glycolysis IV (plant cytosol)
TVNIR_3623	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
TVNIR_3623	PWY-5484	glycolysis II (from fructose 6-phosphate)
TVNIR_3623	PWY-6531	mannitol cycle
TVNIR_3623	PWY-7385	1,3-propanediol biosynthesis (engineered)
TVNIR_3624	PWY-6823	molybdenum cofactor biosynthesis
TVNIR_3638	PWY-381	nitrate reduction II (assimilatory)
TVNIR_3638	PWY-5675	nitrate reduction V (assimilatory)
TVNIR_3638	PWY-6549	L-glutamine biosynthesis III
TVNIR_3638	PWY-6963	ammonia assimilation cycle I
TVNIR_3638	PWY-6964	ammonia assimilation cycle II
TVNIR_3652	PWY-5723	Rubisco shunt
TVNIR_3657	PWY-6891	thiazole biosynthesis II (Bacillus)
TVNIR_3657	PWY-6892	thiazole biosynthesis I (E. coli)
TVNIR_3698	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
TVNIR_3714	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
TVNIR_3716	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
TVNIR_3718	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
TVNIR_3719	PWY-6749	CMP-legionaminate biosynthesis I
TVNIR_3723	PWY-621	sucrose degradation III (sucrose invertase)
TVNIR_3733	PWY-5667	CDP-diacylglycerol biosynthesis I
TVNIR_3733	PWY-5981	CDP-diacylglycerol biosynthesis III
TVNIR_3750	PWY-5686	UMP biosynthesis
TVNIR_3760	PWY-5686	UMP biosynthesis
TVNIR_3762	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
TVNIR_3769	PWY-5484	glycolysis II (from fructose 6-phosphate)
TVNIR_3771	PWY-1042	glycolysis IV (plant cytosol)
TVNIR_3771	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
TVNIR_3771	PWY-5484	glycolysis II (from fructose 6-phosphate)
TVNIR_3771	PWY-6531	mannitol cycle
TVNIR_3771	PWY-7385	1,3-propanediol biosynthesis (engineered)
TVNIR_3776	PWY-4041	&gamma;-glutamyl cycle
TVNIR_3776	PWY-5826	hypoglycin biosynthesis
TVNIR_3783	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
TVNIR_3784	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
TVNIR_3790	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
TVNIR_3798	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
TVNIR_3799	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
TVNIR_3828	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
TVNIR_3828	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
TVNIR_3829	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
TVNIR_3829	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
TVNIR_3830	PWY-4983	L-citrulline-nitric oxide cycle
TVNIR_3830	PWY-4984	urea cycle
TVNIR_3830	PWY-5	canavanine biosynthesis
TVNIR_3830	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
TVNIR_3830	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
TVNIR_3846	PWY-1042	glycolysis IV (plant cytosol)
TVNIR_3846	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
TVNIR_3846	PWY-5484	glycolysis II (from fructose 6-phosphate)
TVNIR_3846	PWY-5723	Rubisco shunt
TVNIR_3846	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
TVNIR_3846	PWY-6886	1-butanol autotrophic biosynthesis
TVNIR_3846	PWY-6901	superpathway of glucose and xylose degradation
TVNIR_3846	PWY-7003	glycerol degradation to butanol
TVNIR_3846	PWY-7124	ethylene biosynthesis V (engineered)
TVNIR_3846	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
TVNIR_3850	PWY-3821	galactose degradation III
TVNIR_3850	PWY-6317	galactose degradation I (Leloir pathway)
TVNIR_3850	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
TVNIR_3850	PWY-6527	stachyose degradation
TVNIR_3850	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
TVNIR_3850	PWY-7344	UDP-D-galactose biosynthesis
