THI_0005	PWY-1881	formate oxidation to CO<sub>2</sub>
THI_0005	PWY-5497	purine nucleobases degradation II (anaerobic)
THI_0005	PWY-6696	oxalate degradation III
THI_0007	PWY-2723	trehalose degradation V
THI_0007	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
THI_0007	PWY-5661	GDP-glucose biosynthesis
THI_0007	PWY-7238	sucrose biosynthesis II
THI_0007	PWY-7385	1,3-propanediol biosynthesis (engineered)
THI_0008	PWY-5101	L-isoleucine biosynthesis II
THI_0008	PWY-5103	L-isoleucine biosynthesis III
THI_0008	PWY-5104	L-isoleucine biosynthesis IV
THI_0008	PWY-7111	pyruvate fermentation to isobutanol (engineered)
THI_0009	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
THI_0009	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
THI_0009	PWY-7242	D-fructuronate degradation
THI_0009	PWY-7310	D-glucosaminate degradation
THI_0029	PWY-5386	methylglyoxal degradation I
THI_0039	PWY-2941	L-lysine biosynthesis II
THI_0039	PWY-2942	L-lysine biosynthesis III
THI_0039	PWY-5097	L-lysine biosynthesis VI
THI_0058	PWY-5686	UMP biosynthesis
THI_0096	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THI_0096	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THI_0110	PWY-6123	inosine-5'-phosphate biosynthesis I
THI_0110	PWY-6124	inosine-5'-phosphate biosynthesis II
THI_0110	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THI_0110	PWY-7234	inosine-5'-phosphate biosynthesis III
THI_0113	PWY-5269	cardiolipin biosynthesis II
THI_0113	PWY-5668	cardiolipin biosynthesis I
THI_0114	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
THI_0114	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
THI_0114	PWY-6896	thiamin salvage I
THI_0114	PWY-6897	thiamin salvage II
THI_0115	PWY-1281	sulfoacetaldehyde degradation I
THI_0115	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
THI_0115	PWY-5482	pyruvate fermentation to acetate II
THI_0115	PWY-5485	pyruvate fermentation to acetate IV
THI_0115	PWY-5497	purine nucleobases degradation II (anaerobic)
THI_0115	PWY-6637	sulfolactate degradation II
THI_0115	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
THI_0135	PWY-5532	adenosine nucleotides degradation IV
THI_0135	PWY-5723	Rubisco shunt
THI_0136	PWY-5532	adenosine nucleotides degradation IV
THI_0136	PWY-5723	Rubisco shunt
THI_0146	PWY-7158	L-phenylalanine degradation V
THI_0154	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
THI_0154	PWY-5723	Rubisco shunt
THI_0158	PWY-5484	glycolysis II (from fructose 6-phosphate)
THI_0159	PWY-5723	Rubisco shunt
THI_0160	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
THI_0160	PWY-5723	Rubisco shunt
THI_0160	PWY-6891	thiazole biosynthesis II (Bacillus)
THI_0160	PWY-6892	thiazole biosynthesis I (E. coli)
THI_0160	PWY-6901	superpathway of glucose and xylose degradation
THI_0160	PWY-7560	methylerythritol phosphate pathway II
THI_0161	PWY-181	photorespiration
THI_0162	PWY-1042	glycolysis IV (plant cytosol)
THI_0162	PWY-5484	glycolysis II (from fructose 6-phosphate)
THI_0162	PWY-6901	superpathway of glucose and xylose degradation
THI_0162	PWY-7003	glycerol degradation to butanol
THI_0163	PWY-1042	glycolysis IV (plant cytosol)
THI_0163	PWY-5484	glycolysis II (from fructose 6-phosphate)
THI_0163	PWY-6886	1-butanol autotrophic biosynthesis
THI_0163	PWY-6901	superpathway of glucose and xylose degradation
THI_0163	PWY-7003	glycerol degradation to butanol
THI_0164	PWY-1042	glycolysis IV (plant cytosol)
THI_0164	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
THI_0164	PWY-5484	glycolysis II (from fructose 6-phosphate)
THI_0164	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THI_0164	PWY-7385	1,3-propanediol biosynthesis (engineered)
THI_0178	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
THI_0191	PWY-40	putrescine biosynthesis I
THI_0191	PWY-6305	putrescine biosynthesis IV
THI_0200	PWY-381	nitrate reduction II (assimilatory)
THI_0200	PWY-5675	nitrate reduction V (assimilatory)
THI_0200	PWY-6549	L-glutamine biosynthesis III
THI_0200	PWY-6963	ammonia assimilation cycle I
THI_0200	PWY-6964	ammonia assimilation cycle II
THI_0207	PWY-5692	allantoin degradation to glyoxylate II
THI_0207	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
THI_0229	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
THI_0229	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
THI_0239	PWY-5344	L-homocysteine biosynthesis
THI_0255	PWY-5381	pyridine nucleotide cycling (plants)
THI_0283	PWY-4261	glycerol degradation I
THI_0283	PWY-6118	glycerol-3-phosphate shuttle
THI_0283	PWY-6952	glycerophosphodiester degradation
THI_0300	PWY-6700	queuosine biosynthesis
THI_0306	PWY-6700	queuosine biosynthesis
THI_0330	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THI_0330	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
THI_0335	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
THI_0335	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
THI_0344	PWY-6605	adenine and adenosine salvage II
THI_0344	PWY-6610	adenine and adenosine salvage IV
THI_0352	PWY-5278	sulfite oxidation III
THI_0352	PWY-5340	sulfate activation for sulfonation
THI_0352	PWY-6683	sulfate reduction III (assimilatory)
THI_0352	PWY-6932	selenate reduction
THI_0353	PWY-5278	sulfite oxidation III
THI_0353	PWY-5340	sulfate activation for sulfonation
THI_0353	PWY-6683	sulfate reduction III (assimilatory)
THI_0353	PWY-6932	selenate reduction
THI_0369	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
THI_0369	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
THI_0369	PWY-6164	3-dehydroquinate biosynthesis I
THI_0371	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
THI_0382	PWY-7560	methylerythritol phosphate pathway II
THI_0391	PWY-5686	UMP biosynthesis
THI_0398	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THI_0398	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THI_0399	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
THI_0399	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
THI_0399	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
THI_0400	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THI_0400	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THI_0402	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
THI_0402	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
THI_0402	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
THI_0402	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
THI_0403	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THI_0403	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THI_0404	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THI_0404	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THI_0411	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THI_0420	PWY-5381	pyridine nucleotide cycling (plants)
THI_0420	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
THI_0420	PWY-6596	adenosine nucleotides degradation I
THI_0420	PWY-6606	guanosine nucleotides degradation II
THI_0420	PWY-6607	guanosine nucleotides degradation I
THI_0420	PWY-6608	guanosine nucleotides degradation III
THI_0420	PWY-7185	UTP and CTP dephosphorylation I
THI_0446	PWY-4381	fatty acid biosynthesis initiation I
THI_0446	PWY-5743	3-hydroxypropanoate cycle
THI_0446	PWY-5744	glyoxylate assimilation
THI_0446	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
THI_0446	PWY-6679	jadomycin biosynthesis
THI_0446	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
THI_0449	PWY-2941	L-lysine biosynthesis II
THI_0449	PWY-2942	L-lysine biosynthesis III
THI_0449	PWY-5097	L-lysine biosynthesis VI
THI_0449	PWY-6559	spermidine biosynthesis II
THI_0449	PWY-6562	norspermidine biosynthesis
THI_0449	PWY-7153	grixazone biosynthesis
THI_0462	PWY-1361	benzoyl-CoA degradation I (aerobic)
THI_0462	PWY-2361	3-oxoadipate degradation
THI_0462	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
THI_0464	PWY-1361	benzoyl-CoA degradation I (aerobic)
THI_0464	PWY-5109	2-methylbutanoate biosynthesis
THI_0464	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
THI_0464	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
THI_0464	PWY-5177	glutaryl-CoA degradation
THI_0464	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
THI_0464	PWY-6435	4-hydroxybenzoate biosynthesis V
THI_0464	PWY-6583	pyruvate fermentation to butanol I
THI_0464	PWY-6863	pyruvate fermentation to hexanol
THI_0464	PWY-6883	pyruvate fermentation to butanol II
THI_0464	PWY-6944	androstenedione degradation
THI_0464	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
THI_0464	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
THI_0464	PWY-7007	methyl ketone biosynthesis
THI_0464	PWY-7046	4-coumarate degradation (anaerobic)
THI_0464	PWY-7094	fatty acid salvage
THI_0464	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
THI_0464	PWY-735	jasmonic acid biosynthesis
THI_0464	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
THI_0466	PWY-101	photosynthesis light reactions
THI_0466	PWY-1361	benzoyl-CoA degradation I (aerobic)
THI_0466	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
THI_0467	PWY-1361	benzoyl-CoA degradation I (aerobic)
THI_0468	PWY-1361	benzoyl-CoA degradation I (aerobic)
THI_0469	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
THI_0479	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
THI_0479	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
THI_0483	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
THI_0483	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
THI_0483	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
THI_0493	PWY-6420	pyrroloquinoline quinone biosynthesis
THI_0513	PWY-5484	glycolysis II (from fructose 6-phosphate)
THI_0525	PWY-1042	glycolysis IV (plant cytosol)
THI_0525	PWY-1622	formaldehyde assimilation I (serine pathway)
THI_0525	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
THI_0525	PWY-5484	glycolysis II (from fructose 6-phosphate)
THI_0525	PWY-5723	Rubisco shunt
THI_0525	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THI_0525	PWY-6886	1-butanol autotrophic biosynthesis
THI_0525	PWY-6901	superpathway of glucose and xylose degradation
THI_0525	PWY-7003	glycerol degradation to butanol
THI_0525	PWY-7124	ethylene biosynthesis V (engineered)
THI_0525	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
THI_0542	PWY-2201	folate transformations I
THI_0542	PWY-5497	purine nucleobases degradation II (anaerobic)
THI_0556	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
THI_0566	PWY-5381	pyridine nucleotide cycling (plants)
THI_0572	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
THI_0572	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
THI_0572	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
THI_0572	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
THI_0572	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THI_0572	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THI_0572	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
THI_0572	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
THI_0648	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
THI_0648	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
THI_0648	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
THI_0648	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
THI_0648	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THI_0648	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THI_0648	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
THI_0648	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
THI_0650	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
THI_0650	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
THI_0650	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
THI_0650	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
THI_0650	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THI_0650	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THI_0650	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
THI_0650	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
THI_0653	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
THI_0654	PWY-4983	L-citrulline-nitric oxide cycle
THI_0654	PWY-4984	urea cycle
THI_0654	PWY-5	canavanine biosynthesis
THI_0654	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THI_0654	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THI_0668	PWY-3341	L-proline biosynthesis III
THI_0668	PWY-4981	L-proline biosynthesis II (from arginine)
THI_0668	PWY-6344	L-ornithine degradation II (Stickland reaction)
THI_0675	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THI_0675	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THI_0724	PWY-6749	CMP-legionaminate biosynthesis I
THI_0726	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
THI_0731	PWY-5451	acetone degradation I (to methylglyoxal)
THI_0731	PWY-6588	pyruvate fermentation to acetone
THI_0731	PWY-6876	isopropanol biosynthesis
THI_0731	PWY-7466	acetone degradation III (to propane-1,2-diol)
THI_0733	PWY-4261	glycerol degradation I
THI_0754	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
THI_0754	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
THI_0755	PWY-6424	THI_0755|THI_0755|YP_003623312.1|GeneID:13880009
THI_0759	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
THI_0759	PWY-6153	autoinducer AI-2 biosynthesis I
THI_0759	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
THI_0773	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
THI_0782	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THI_0782	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THI_0783	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THI_0783	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THI_0802	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
THI_0802	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
THI_0802	PWY-6268	adenosylcobalamin salvage from cobalamin
THI_0802	PWY-6269	adenosylcobalamin salvage from cobinamide II
THI_0804	PWY-5028	L-histidine degradation II
THI_0804	PWY-5030	L-histidine degradation III
THI_0805	PWY-5028	L-histidine degradation II
THI_0805	PWY-5030	L-histidine degradation III
THI_0809	PWY-5028	L-histidine degradation II
THI_0809	PWY-5030	L-histidine degradation III
THI_0812	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THI_0812	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THI_0819	PWY-5674	nitrate reduction IV (dissimilatory)
THI_0846	PWY-2941	L-lysine biosynthesis II
THI_0846	PWY-2942	L-lysine biosynthesis III
THI_0846	PWY-5097	L-lysine biosynthesis VI
THI_0855	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
THI_0856	PWY-6164	3-dehydroquinate biosynthesis I
THI_0889	PWY-6424	THI_0889|THI_0889|YP_003623437.1|GeneID:13881256
THI_0900	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
THI_0900	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
THI_0910	PWY-1622	formaldehyde assimilation I (serine pathway)
THI_0910	PWY-181	photorespiration
THI_0910	PWY-2161	folate polyglutamylation
THI_0910	PWY-2201	folate transformations I
THI_0910	PWY-3661	glycine betaine degradation I
THI_0910	PWY-3661-1	glycine betaine degradation II (mammalian)
THI_0910	PWY-3841	folate transformations II
THI_0910	PWY-5497	purine nucleobases degradation II (anaerobic)
THI_0912	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
THI_0912	PWY-6853	ethylene biosynthesis II (microbes)
THI_0912	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
THI_0964	PWY-2723	trehalose degradation V
THI_0964	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
THI_0964	PWY-5661	GDP-glucose biosynthesis
THI_0964	PWY-5940	streptomycin biosynthesis
THI_0964	PWY-621	sucrose degradation III (sucrose invertase)
THI_0964	PWY-622	starch biosynthesis
THI_0964	PWY-6731	starch degradation III
THI_0964	PWY-6737	starch degradation V
THI_0964	PWY-6981	chitin biosynthesis
THI_0964	PWY-7238	sucrose biosynthesis II
THI_0964	PWY-7343	UDP-glucose biosynthesis
THI_0965	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
THI_0965	PWY-7494	choline degradation IV
THI_0966	PWY-5642	2,4-dinitrotoluene degradation
THI_0966	PWY-6373	acrylate degradation
THI_0970	PWY-1622	formaldehyde assimilation I (serine pathway)
THI_0970	PWY-5484	glycolysis II (from fructose 6-phosphate)
THI_0974	PWY-5667	CDP-diacylglycerol biosynthesis I
THI_0974	PWY-5981	CDP-diacylglycerol biosynthesis III
THI_1020	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
THI_1020	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
THI_1020	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
THI_1020	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
THI_1026	PWY-2941	L-lysine biosynthesis II
THI_1026	PWY-2942	L-lysine biosynthesis III
THI_1026	PWY-5097	L-lysine biosynthesis VI
THI_1028	PWY-3821	galactose degradation III
THI_1028	PWY-6317	galactose degradation I (Leloir pathway)
THI_1028	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
THI_1028	PWY-6527	stachyose degradation
THI_1028	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
THI_1028	PWY-7344	UDP-D-galactose biosynthesis
THI_1034	PWY-6123	inosine-5'-phosphate biosynthesis I
THI_1034	PWY-6124	inosine-5'-phosphate biosynthesis II
THI_1034	PWY-7234	inosine-5'-phosphate biosynthesis III
THI_1037	PWY-6123	inosine-5'-phosphate biosynthesis I
THI_1037	PWY-7234	inosine-5'-phosphate biosynthesis III
THI_1045	PWY-5392	reductive TCA cycle II
THI_1045	PWY-5537	pyruvate fermentation to acetate V
THI_1045	PWY-5538	pyruvate fermentation to acetate VI
THI_1045	PWY-5690	TCA cycle II (plants and fungi)
THI_1045	PWY-5913	TCA cycle VI (obligate autotrophs)
THI_1045	PWY-6728	methylaspartate cycle
THI_1045	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THI_1045	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
THI_1046	PWY-5392	reductive TCA cycle II
THI_1046	PWY-5537	pyruvate fermentation to acetate V
THI_1046	PWY-5538	pyruvate fermentation to acetate VI
THI_1046	PWY-5690	TCA cycle II (plants and fungi)
THI_1046	PWY-5913	TCA cycle VI (obligate autotrophs)
THI_1046	PWY-6728	methylaspartate cycle
THI_1046	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THI_1046	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
THI_1050	PWY-1042	glycolysis IV (plant cytosol)
THI_1050	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
THI_1050	PWY-5484	glycolysis II (from fructose 6-phosphate)
THI_1050	PWY-5723	Rubisco shunt
THI_1050	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THI_1050	PWY-6886	1-butanol autotrophic biosynthesis
THI_1050	PWY-6901	superpathway of glucose and xylose degradation
THI_1050	PWY-7003	glycerol degradation to butanol
THI_1050	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
THI_1050	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
THI_1111	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THI_1111	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THI_1126	PWY-5663	tetrahydrobiopterin biosynthesis I
THI_1126	PWY-5664	tetrahydrobiopterin biosynthesis II
THI_1126	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
THI_1126	PWY-6703	preQ<sub>0</sub> biosynthesis
THI_1126	PWY-6983	tetrahydrobiopterin biosynthesis III
THI_1126	PWY-7442	drosopterin and aurodrosopterin biosynthesis
THI_1132	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
THI_1132	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
THI_1132	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
THI_1136	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THI_1151	PWY-5316	nicotine biosynthesis
THI_1151	PWY-5381	pyridine nucleotide cycling (plants)
THI_1151	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
THI_1151	PWY-7342	superpathway of nicotine biosynthesis
THI_1152	PWY-5316	nicotine biosynthesis
THI_1152	PWY-7342	superpathway of nicotine biosynthesis
THI_1163	PWY-5958	acridone alkaloid biosynthesis
THI_1163	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
THI_1163	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
THI_1176	PWY-7183	pyrimidine nucleobases salvage I
THI_1179	PWY-6823	molybdenum cofactor biosynthesis
THI_1180	PWY-5964	guanylyl molybdenum cofactor biosynthesis
THI_1187	PWY-4981	L-proline biosynthesis II (from arginine)
THI_1187	PWY-4984	urea cycle
THI_1187	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THI_1191	PWY-7158	L-phenylalanine degradation V
THI_1199	PWY-6749	CMP-legionaminate biosynthesis I
THI_1217	PWY-5316	nicotine biosynthesis
THI_1217	PWY-7342	superpathway of nicotine biosynthesis
THI_1220	PWY-6654	phosphopantothenate biosynthesis III
THI_1247	PWY-6654	phosphopantothenate biosynthesis III
THI_1249	PWY-2301	<i>myo</i>-inositol biosynthesis
THI_1249	PWY-4702	phytate degradation I
THI_1249	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
THI_1251	PWY-6936	seleno-amino acid biosynthesis
THI_1251	PWY-7274	D-cycloserine biosynthesis
THI_1258	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
THI_1258	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
THI_1259	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
THI_1259	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
THI_1261	PWY-6134	L-tyrosine biosynthesis IV
THI_1261	PWY-7158	L-phenylalanine degradation V
THI_1277	PWY-6829	tRNA methylation (yeast)
THI_1277	PWY-7285	methylwyosine biosynthesis
THI_1277	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
THI_1282	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
THI_1282	PWY-6148	tetrahydromethanopterin biosynthesis
THI_1282	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
THI_1282	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
THI_1287	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
THI_1287	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
THI_1287	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
THI_1288	PWY-6617	adenosine nucleotides degradation III
THI_1323	PWY-101	photosynthesis light reactions
THI_1323	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
THI_1337	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
THI_1340	PWY-6823	molybdenum cofactor biosynthesis
THI_1340	PWY-6891	thiazole biosynthesis II (Bacillus)
THI_1340	PWY-6892	thiazole biosynthesis I (E. coli)
THI_1340	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
THI_1350	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THI_1354	PWY-3781	aerobic respiration I (cytochrome c)
THI_1354	PWY-4521	arsenite oxidation I (respiratory)
THI_1354	PWY-6692	Fe(II) oxidation
THI_1354	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THI_1355	PWY-3781	aerobic respiration I (cytochrome c)
THI_1355	PWY-4521	arsenite oxidation I (respiratory)
THI_1355	PWY-6692	Fe(II) oxidation
THI_1355	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THI_1383	PWY-3801	sucrose degradation II (sucrose synthase)
THI_1383	PWY-5054	sorbitol biosynthesis I
THI_1383	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
THI_1383	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
THI_1383	PWY-5659	GDP-mannose biosynthesis
THI_1383	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THI_1383	PWY-621	sucrose degradation III (sucrose invertase)
THI_1383	PWY-622	starch biosynthesis
THI_1383	PWY-6531	mannitol cycle
THI_1383	PWY-6981	chitin biosynthesis
THI_1383	PWY-7238	sucrose biosynthesis II
THI_1383	PWY-7347	sucrose biosynthesis III
THI_1383	PWY-7385	1,3-propanediol biosynthesis (engineered)
THI_1384	PWY-5941	glycogen degradation II (eukaryotic)
THI_1384	PWY-622	starch biosynthesis
THI_1384	PWY-6731	starch degradation III
THI_1384	PWY-6737	starch degradation V
THI_1384	PWY-7238	sucrose biosynthesis II
THI_1385	PWY-622	starch biosynthesis
THI_1386	PWY-622	starch biosynthesis
THI_1387	PWY-6749	CMP-legionaminate biosynthesis I
THI_1389	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
THI_1389	PWY-622	starch biosynthesis
THI_1390	PWY-5941	glycogen degradation II (eukaryotic)
THI_1390	PWY-6724	starch degradation II
THI_1390	PWY-6737	starch degradation V
THI_1390	PWY-7238	sucrose biosynthesis II
THI_1391	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
THI_1391	PWY-6855	chitin degradation I (archaea)
THI_1391	PWY-6906	chitin derivatives degradation
THI_1392	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
THI_1420	PWY-5269	cardiolipin biosynthesis II
THI_1420	PWY-5668	cardiolipin biosynthesis I
THI_1474	PWY-5482	pyruvate fermentation to acetate II
THI_1474	PWY-5485	pyruvate fermentation to acetate IV
THI_1474	PWY-5497	purine nucleobases degradation II (anaerobic)
THI_1475	PWY-1281	sulfoacetaldehyde degradation I
THI_1475	PWY-5482	pyruvate fermentation to acetate II
THI_1475	PWY-5485	pyruvate fermentation to acetate IV
THI_1475	PWY-5497	purine nucleobases degradation II (anaerobic)
THI_1475	PWY-6637	sulfolactate degradation II
THI_1477	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
THI_1549	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THI_1563	PWY-2781	<i>cis</i>-zeatin biosynthesis
THI_1570	PWY-702	L-methionine biosynthesis II
THI_1579	PWY-6785	hydrogen production VIII
THI_1582	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
THI_1585	PWY-6891	thiazole biosynthesis II (Bacillus)
THI_1585	PWY-6892	thiazole biosynthesis I (E. coli)
THI_1602	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
THI_1602	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
THI_1602	PWY-6897	thiamin salvage II
THI_1602	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
THI_1602	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
THI_1602	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
THI_1602	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
THI_1608	PWY-5971	palmitate biosynthesis II (bacteria and plants)
THI_1608	PWY-5973	<i>cis</i>-vaccenate biosynthesis
THI_1608	PWY-5989	stearate biosynthesis II (bacteria and plants)
THI_1608	PWY-6113	superpathway of mycolate biosynthesis
THI_1608	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
THI_1608	PWY-6519	8-amino-7-oxononanoate biosynthesis I
THI_1608	PWY-7096	triclosan resistance
THI_1608	PWYG-321	mycolate biosynthesis
THI_1642	PWY-5676	acetyl-CoA fermentation to butanoate II
THI_1642	PWY-5741	ethylmalonyl-CoA pathway
THI_1642	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
THI_1654	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
THI_1654	PWY-6167	flavin biosynthesis II (archaea)
THI_1654	PWY-6168	flavin biosynthesis III (fungi)
THI_1667	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THI_1667	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THI_1671	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
THI_1672	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
THI_1673	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
THI_1673	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
THI_1681	PWY-723	alkylnitronates degradation
THI_1684	PWY-6785	hydrogen production VIII
THI_1686	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THI_1686	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THI_1725	PWY-6157	autoinducer AI-1 biosynthesis
THI_1741	PWY-6871	3-methylbutanol biosynthesis
THI_1742	PWY-6938	NADH repair
THI_1747	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THI_1751	PWY-3841	folate transformations II
THI_1751	PWY-6614	tetrahydrofolate biosynthesis
THI_1752	PWY-3841	folate transformations II
THI_1752	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
THI_1752	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
THI_1752	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
THI_1752	PWY-7199	pyrimidine deoxyribonucleosides salvage
THI_1752	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
THI_1758	PWY-5913	TCA cycle VI (obligate autotrophs)
THI_1758	PWY-6549	L-glutamine biosynthesis III
THI_1758	PWY-6728	methylaspartate cycle
THI_1758	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THI_1758	PWY-7124	ethylene biosynthesis V (engineered)
THI_1758	PWY-7254	TCA cycle VII (acetate-producers)
THI_1758	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
THI_1766	PWY-5101	L-isoleucine biosynthesis II
THI_1766	PWY-5103	L-isoleucine biosynthesis III
THI_1766	PWY-5104	L-isoleucine biosynthesis IV
THI_1766	PWY-7111	pyruvate fermentation to isobutanol (engineered)
THI_1768	PWY-5497	purine nucleobases degradation II (anaerobic)
THI_1768	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
THI_1768	PWY-6538	caffeine degradation III (bacteria, via demethylation)
THI_1768	PWY-6596	adenosine nucleotides degradation I
THI_1768	PWY-6606	guanosine nucleotides degradation II
THI_1768	PWY-6607	guanosine nucleotides degradation I
THI_1768	PWY-6608	guanosine nucleotides degradation III
THI_1768	PWY-6999	theophylline degradation
THI_1769	PWY-5497	purine nucleobases degradation II (anaerobic)
THI_1769	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
THI_1769	PWY-6538	caffeine degradation III (bacteria, via demethylation)
THI_1769	PWY-6596	adenosine nucleotides degradation I
THI_1769	PWY-6606	guanosine nucleotides degradation II
THI_1769	PWY-6607	guanosine nucleotides degradation I
THI_1769	PWY-6608	guanosine nucleotides degradation III
THI_1769	PWY-6999	theophylline degradation
THI_1772	PWY-5497	purine nucleobases degradation II (anaerobic)
THI_1772	PWY-6606	guanosine nucleotides degradation II
THI_1772	PWY-6608	guanosine nucleotides degradation III
THI_1772	PWY-7442	drosopterin and aurodrosopterin biosynthesis
THI_1778	PWY-6610	adenine and adenosine salvage IV
THI_1784	PWY-5350	thiosulfate disproportionation III (rhodanese)
THI_1790	PWY-6891	thiazole biosynthesis II (Bacillus)
THI_1790	PWY-6892	thiazole biosynthesis I (E. coli)
THI_1790	PWY-7560	methylerythritol phosphate pathway II
THI_1795	PWY-5663	tetrahydrobiopterin biosynthesis I
THI_1795	PWY-5664	tetrahydrobiopterin biosynthesis II
THI_1795	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
THI_1795	PWY-6703	preQ<sub>0</sub> biosynthesis
THI_1795	PWY-6983	tetrahydrobiopterin biosynthesis III
THI_1795	PWY-7442	drosopterin and aurodrosopterin biosynthesis
THI_1815	PWY-381	nitrate reduction II (assimilatory)
THI_1815	PWY-5675	nitrate reduction V (assimilatory)
THI_1815	PWY-6549	L-glutamine biosynthesis III
THI_1815	PWY-6963	ammonia assimilation cycle I
THI_1815	PWY-6964	ammonia assimilation cycle II
THI_1823	PWY-5101	L-isoleucine biosynthesis II
THI_1823	PWY-5103	L-isoleucine biosynthesis III
THI_1823	PWY-5104	L-isoleucine biosynthesis IV
THI_1823	PWY-7111	pyruvate fermentation to isobutanol (engineered)
THI_1850	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
THI_1850	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
THI_1850	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
THI_1858	PWY-3781	aerobic respiration I (cytochrome c)
THI_1858	PWY-4521	arsenite oxidation I (respiratory)
THI_1858	PWY-6692	Fe(II) oxidation
THI_1858	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THI_1878	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
THI_1878	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
THI_1878	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
THI_1878	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
THI_1878	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
THI_1878	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
THI_1903	PWY-6012	acyl carrier protein metabolism I
THI_1903	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
THI_1914	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
THI_1914	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
THI_1914	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
THI_1914	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
THI_1914	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
THI_1914	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
THI_1914	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
THI_1914	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
THI_1914	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
THI_1914	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
THI_2031	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
THI_2033	PWY-7560	methylerythritol phosphate pathway II
THI_2041	PWY-5532	adenosine nucleotides degradation IV
THI_2041	PWY-5723	Rubisco shunt
THI_2086	PWY-6823	molybdenum cofactor biosynthesis
THI_2095	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THI_2096	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
THI_2096	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
THI_2102	PWY-6854	ethylene biosynthesis III (microbes)
THI_2107	PWY-7560	methylerythritol phosphate pathway II
THI_2108	PWY-7560	methylerythritol phosphate pathway II
THI_2117	PWY-5392	reductive TCA cycle II
THI_2117	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
THI_2117	PWY-5690	TCA cycle II (plants and fungi)
THI_2117	PWY-5913	TCA cycle VI (obligate autotrophs)
THI_2117	PWY-6728	methylaspartate cycle
THI_2117	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THI_2117	PWY-7254	TCA cycle VII (acetate-producers)
THI_2117	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
THI_2130	PWY-1042	glycolysis IV (plant cytosol)
THI_2130	PWY-1622	formaldehyde assimilation I (serine pathway)
THI_2130	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
THI_2130	PWY-5484	glycolysis II (from fructose 6-phosphate)
THI_2130	PWY-5723	Rubisco shunt
THI_2130	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THI_2130	PWY-6886	1-butanol autotrophic biosynthesis
THI_2130	PWY-6901	superpathway of glucose and xylose degradation
THI_2130	PWY-7003	glycerol degradation to butanol
THI_2130	PWY-7124	ethylene biosynthesis V (engineered)
THI_2130	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
THI_2145	PWY-6749	CMP-legionaminate biosynthesis I
THI_2146	PWY-6614	tetrahydrofolate biosynthesis
THI_2153	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THI_2153	PWY-5686	UMP biosynthesis
THI_2153	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THI_2155	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THI_2155	PWY-5686	UMP biosynthesis
THI_2155	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THI_2165	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THI_2183	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
THI_2184	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
THI_2184	PWY-6596	adenosine nucleotides degradation I
THI_2184	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
THI_2187	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THI_2198	PWY-7560	methylerythritol phosphate pathway II
THI_2202	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
THI_2202	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
THI_2202	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
THI_2202	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
THI_2202	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
THI_2202	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
THI_2202	PWY-7205	CMP phosphorylation
THI_2202	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
THI_2202	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THI_2202	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
THI_2202	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THI_2202	PWY-7224	purine deoxyribonucleosides salvage
THI_2202	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
THI_2202	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
THI_2207	PWY-5381	pyridine nucleotide cycling (plants)
THI_2207	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
THI_2216	PWY-5484	glycolysis II (from fructose 6-phosphate)
THI_2228	PWY-3801	sucrose degradation II (sucrose synthase)
THI_2228	PWY-6527	stachyose degradation
THI_2228	PWY-6981	chitin biosynthesis
THI_2228	PWY-7238	sucrose biosynthesis II
THI_2228	PWY-7343	UDP-glucose biosynthesis
THI_2264	PWY-6936	seleno-amino acid biosynthesis
THI_2267	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THI_2267	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
THI_2268	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THI_2268	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
THI_2269	PWY-1622	formaldehyde assimilation I (serine pathway)
THI_2269	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
THI_2269	PWY-5913	TCA cycle VI (obligate autotrophs)
THI_2269	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THI_2269	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
THI_2269	PWY-6549	L-glutamine biosynthesis III
THI_2269	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
THI_2269	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
THI_2269	PWY-7124	ethylene biosynthesis V (engineered)
THI_2281	PWY-5913	TCA cycle VI (obligate autotrophs)
THI_2281	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
THI_2281	PWY-6638	sulfolactate degradation III
THI_2281	PWY-6642	(<i>R</i>)-cysteate degradation
THI_2281	PWY-6643	coenzyme M biosynthesis II
THI_2281	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
THI_2281	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
THI_2281	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
THI_2287	PWY-6700	queuosine biosynthesis
THI_2302	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
THI_2302	PWY-7205	CMP phosphorylation
THI_2303	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
THI_2305	PWY-3461	L-tyrosine biosynthesis II
THI_2305	PWY-3462	L-phenylalanine biosynthesis II
THI_2305	PWY-6120	L-tyrosine biosynthesis III
THI_2305	PWY-6627	salinosporamide A biosynthesis
THI_2305	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
THI_2351	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
THI_2352	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
THI_2353	PWY-6519	8-amino-7-oxononanoate biosynthesis I
THI_2353	PWY-6578	8-amino-7-oxononanoate biosynthesis III
THI_2353	PWY-7147	8-amino-7-oxononanoate biosynthesis II
THI_2357	PWY-5155	&beta;-alanine biosynthesis III
THI_2397	PWY-6672	<i>cis</i>-genanyl-CoA degradation
THI_2397	PWY-7118	chitin degradation to ethanol
THI_2399	PWY-5392	reductive TCA cycle II
THI_2399	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
THI_2399	PWY-5690	TCA cycle II (plants and fungi)
THI_2399	PWY-5913	TCA cycle VI (obligate autotrophs)
THI_2399	PWY-6728	methylaspartate cycle
THI_2399	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THI_2399	PWY-7254	TCA cycle VII (acetate-producers)
THI_2399	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
THI_2401	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THI_2401	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THI_2406	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
THI_2407	PWY-5674	nitrate reduction IV (dissimilatory)
THI_2430	PWY-5386	methylglyoxal degradation I
THI_2437	PWY-6823	molybdenum cofactor biosynthesis
THI_2439	PWY-6823	molybdenum cofactor biosynthesis
THI_2452	PWY-5484	glycolysis II (from fructose 6-phosphate)
THI_2461	PWY-5971	palmitate biosynthesis II (bacteria and plants)
THI_2461	PWY-5973	<i>cis</i>-vaccenate biosynthesis
THI_2461	PWY-5989	stearate biosynthesis II (bacteria and plants)
THI_2461	PWY-5994	palmitate biosynthesis I (animals and fungi)
THI_2461	PWY-6113	superpathway of mycolate biosynthesis
THI_2461	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
THI_2461	PWY-6519	8-amino-7-oxononanoate biosynthesis I
THI_2461	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
THI_2461	PWYG-321	mycolate biosynthesis
THI_2466	PWY-7560	methylerythritol phosphate pathway II
THI_2484	PWY-5669	phosphatidylethanolamine biosynthesis I
THI_2485	PWY-5669	phosphatidylethanolamine biosynthesis I
THI_2486	PWY-5101	L-isoleucine biosynthesis II
THI_2486	PWY-5103	L-isoleucine biosynthesis III
THI_2486	PWY-5104	L-isoleucine biosynthesis IV
THI_2486	PWY-7111	pyruvate fermentation to isobutanol (engineered)
THI_2487	PWY-5101	L-isoleucine biosynthesis II
THI_2487	PWY-5103	L-isoleucine biosynthesis III
THI_2487	PWY-5104	L-isoleucine biosynthesis IV
THI_2487	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
THI_2487	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
THI_2487	PWY-6389	(<i>S</i>)-acetoin biosynthesis
THI_2487	PWY-7111	pyruvate fermentation to isobutanol (engineered)
THI_2488	PWY-5101	L-isoleucine biosynthesis II
THI_2488	PWY-5103	L-isoleucine biosynthesis III
THI_2488	PWY-5104	L-isoleucine biosynthesis IV
THI_2488	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
THI_2488	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
THI_2488	PWY-6389	(<i>S</i>)-acetoin biosynthesis
THI_2488	PWY-7111	pyruvate fermentation to isobutanol (engineered)
THI_2512	PWY-7310	D-glucosaminate degradation
THI_2516	PWY-31	canavanine degradation
THI_2516	PWY-4984	urea cycle
THI_2516	PWY-6305	putrescine biosynthesis IV
THI_2516	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
THI_2523	PWY-5743	3-hydroxypropanoate cycle
THI_2523	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
THI_2523	PWY-6728	methylaspartate cycle
THI_2523	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
THI_2527	PWY-1042	glycolysis IV (plant cytosol)
THI_2527	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
THI_2527	PWY-5484	glycolysis II (from fructose 6-phosphate)
THI_2527	PWY-5723	Rubisco shunt
THI_2527	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THI_2527	PWY-6886	1-butanol autotrophic biosynthesis
THI_2527	PWY-6901	superpathway of glucose and xylose degradation
THI_2527	PWY-7003	glycerol degradation to butanol
THI_2527	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
THI_2527	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
THI_2529	PWY-3781	aerobic respiration I (cytochrome c)
THI_2529	PWY-6692	Fe(II) oxidation
THI_2529	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
THI_2529	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THI_2554	PWY-5839	menaquinol-7 biosynthesis
THI_2554	PWY-5844	menaquinol-9 biosynthesis
THI_2554	PWY-5849	menaquinol-6 biosynthesis
THI_2554	PWY-5890	menaquinol-10 biosynthesis
THI_2554	PWY-5891	menaquinol-11 biosynthesis
THI_2554	PWY-5892	menaquinol-12 biosynthesis
THI_2554	PWY-5895	menaquinol-13 biosynthesis
THI_2562	PWY-2201	folate transformations I
THI_2562	PWY-3841	folate transformations II
THI_2563	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
THI_2570	PWY-4983	L-citrulline-nitric oxide cycle
THI_2570	PWY-4984	urea cycle
THI_2570	PWY-5	canavanine biosynthesis
THI_2570	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THI_2570	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THI_2573	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
THI_2573	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
THI_2577	PWY-2941	L-lysine biosynthesis II
THI_2577	PWY-5097	L-lysine biosynthesis VI
THI_2587	PWY-3961	phosphopantothenate biosynthesis II
THI_2591	PWY-5691	urate degradation to allantoin I
THI_2591	PWY-7394	urate degradation to allantoin II
THI_2594	PWY-5691	urate degradation to allantoin I
THI_2594	PWY-7394	urate degradation to allantoin II
THI_2602	PWY-5971	palmitate biosynthesis II (bacteria and plants)
THI_2602	PWY-5973	<i>cis</i>-vaccenate biosynthesis
THI_2602	PWY-5989	stearate biosynthesis II (bacteria and plants)
THI_2602	PWY-5994	palmitate biosynthesis I (animals and fungi)
THI_2602	PWY-6113	superpathway of mycolate biosynthesis
THI_2602	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
THI_2602	PWY-6519	8-amino-7-oxononanoate biosynthesis I
THI_2602	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
THI_2602	PWYG-321	mycolate biosynthesis
THI_2622	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
THI_2622	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
THI_2622	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
THI_2642	PWY-1042	glycolysis IV (plant cytosol)
THI_2642	PWY-5484	glycolysis II (from fructose 6-phosphate)
THI_2642	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THI_2642	PWY-7003	glycerol degradation to butanol
THI_2654	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
THI_2654	PWY-7177	UTP and CTP dephosphorylation II
THI_2654	PWY-7185	UTP and CTP dephosphorylation I
THI_2655	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
THI_2655	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
THI_2657	PWY-1042	glycolysis IV (plant cytosol)
THI_2657	PWY-1622	formaldehyde assimilation I (serine pathway)
THI_2657	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
THI_2657	PWY-5484	glycolysis II (from fructose 6-phosphate)
THI_2657	PWY-5723	Rubisco shunt
THI_2657	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THI_2657	PWY-6886	1-butanol autotrophic biosynthesis
THI_2657	PWY-6901	superpathway of glucose and xylose degradation
THI_2657	PWY-7003	glycerol degradation to butanol
THI_2657	PWY-7124	ethylene biosynthesis V (engineered)
THI_2657	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
THI_2675	PWY-3941	&beta;-alanine biosynthesis II
THI_2675	PWY-5104	L-isoleucine biosynthesis IV
THI_2675	PWY-5747	2-methylcitrate cycle II
THI_2678	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
THI_2678	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
THI_2680	PWY-6891	thiazole biosynthesis II (Bacillus)
THI_2680	PWY-6892	thiazole biosynthesis I (E. coli)
THI_2680	PWY-7560	methylerythritol phosphate pathway II
THI_2684	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
THI_2684	PWY-2201	folate transformations I
THI_2684	PWY-3841	folate transformations II
THI_2684	PWY-5030	L-histidine degradation III
THI_2684	PWY-5497	purine nucleobases degradation II (anaerobic)
THI_2684	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
THI_2687	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
THI_2687	PWY-5723	Rubisco shunt
THI_2688	PWY-5686	UMP biosynthesis
THI_2691	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THI_2693	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
THI_2693	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
THI_2693	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
THI_2693	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
THI_2696	PWY-2161	folate polyglutamylation
THI_2697	PWY-4381	fatty acid biosynthesis initiation I
THI_2697	PWY-5743	3-hydroxypropanoate cycle
THI_2697	PWY-5744	glyoxylate assimilation
THI_2697	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
THI_2697	PWY-6679	jadomycin biosynthesis
THI_2697	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
THI_2703	PWY-2941	L-lysine biosynthesis II
THI_2703	PWY-2942	L-lysine biosynthesis III
THI_2703	PWY-5097	L-lysine biosynthesis VI
THI_2703	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THI_2703	PWY-6559	spermidine biosynthesis II
THI_2703	PWY-6562	norspermidine biosynthesis
THI_2703	PWY-7153	grixazone biosynthesis
THI_2703	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THI_2704	PWY-7396	butanol and isobutanol biosynthesis (engineered)
THI_2712	PWY-3781	aerobic respiration I (cytochrome c)
THI_2712	PWY-4302	aerobic respiration III (alternative oxidase pathway)
THI_2712	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
THI_2712	PWY-5690	TCA cycle II (plants and fungi)
THI_2712	PWY-6728	methylaspartate cycle
THI_2712	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THI_2712	PWY-7254	TCA cycle VII (acetate-producers)
THI_2712	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THI_2713	PWY-3781	aerobic respiration I (cytochrome c)
THI_2713	PWY-4302	aerobic respiration III (alternative oxidase pathway)
THI_2713	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
THI_2713	PWY-5690	TCA cycle II (plants and fungi)
THI_2713	PWY-6728	methylaspartate cycle
THI_2713	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THI_2713	PWY-7254	TCA cycle VII (acetate-producers)
THI_2713	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THI_2717	PWY-1622	formaldehyde assimilation I (serine pathway)
THI_2717	PWY-5392	reductive TCA cycle II
THI_2717	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
THI_2717	PWY-5690	TCA cycle II (plants and fungi)
THI_2717	PWY-5913	TCA cycle VI (obligate autotrophs)
THI_2717	PWY-6728	methylaspartate cycle
THI_2717	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THI_2717	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
THI_2717	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
THI_2718	PWY-5747	2-methylcitrate cycle II
THI_2743	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
THI_2743	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
THI_2744	PWY-5381	pyridine nucleotide cycling (plants)
THI_2744	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
THI_2747	PWY-6897	thiamin salvage II
THI_2747	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
THI_2747	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
THI_2748	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
THI_2748	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
THI_2748	PWY-6897	thiamin salvage II
THI_2748	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
THI_2748	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
THI_2748	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
THI_2748	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
THI_2749	PWY-6910	hydroxymethylpyrimidine salvage
THI_2749	PWY-7356	thiamin salvage IV (yeast)
THI_2749	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
THI_2759	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
THI_2759	PWY-6416	quinate degradation II
THI_2759	PWY-6707	gallate biosynthesis
THI_2765	PWY-6012	acyl carrier protein metabolism I
THI_2765	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
THI_2780	PWY-5367	petroselinate biosynthesis
THI_2780	PWY-5971	palmitate biosynthesis II (bacteria and plants)
THI_2780	PWY-5973	<i>cis</i>-vaccenate biosynthesis
THI_2780	PWY-5989	stearate biosynthesis II (bacteria and plants)
THI_2780	PWY-5994	palmitate biosynthesis I (animals and fungi)
THI_2780	PWY-6113	superpathway of mycolate biosynthesis
THI_2780	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
THI_2780	PWY-6519	8-amino-7-oxononanoate biosynthesis I
THI_2780	PWY-6951	THI_2780|fabG2|YP_003625193.1|GeneID:13879709
THI_2780	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
THI_2780	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
THI_2780	PWYG-321	mycolate biosynthesis
THI_2781	PWY-4381	fatty acid biosynthesis initiation I
THI_2781	PWY-6799	fatty acid biosynthesis (plant mitochondria)
THI_2781	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
THI_2782	PWY-4381	fatty acid biosynthesis initiation I
THI_2813	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
THI_2813	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
THI_2816	PWY-6167	flavin biosynthesis II (archaea)
THI_2816	PWY-6168	flavin biosynthesis III (fungi)
THI_2816	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THI_2819	PWY-6167	flavin biosynthesis II (archaea)
THI_2819	PWY-6168	flavin biosynthesis III (fungi)
THI_2819	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
THI_2820	PWY-6167	flavin biosynthesis II (archaea)
THI_2820	PWY-6168	flavin biosynthesis III (fungi)
THI_2833	PWY-6840	homoglutathione biosynthesis
THI_2833	PWY-7255	ergothioneine biosynthesis I (bacteria)
THI_2860	PWY-6823	molybdenum cofactor biosynthesis
THI_2860	PWY-6891	thiazole biosynthesis II (Bacillus)
THI_2860	PWY-6892	thiazole biosynthesis I (E. coli)
THI_2860	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
THI_2901	PWY-5663	tetrahydrobiopterin biosynthesis I
THI_2901	PWY-5664	tetrahydrobiopterin biosynthesis II
THI_2901	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
THI_2901	PWY-6703	preQ<sub>0</sub> biosynthesis
THI_2901	PWY-6983	tetrahydrobiopterin biosynthesis III
THI_2901	PWY-7442	drosopterin and aurodrosopterin biosynthesis
THI_2930	PWY-5367	petroselinate biosynthesis
THI_2930	PWY-5971	palmitate biosynthesis II (bacteria and plants)
THI_2930	PWY-5973	<i>cis</i>-vaccenate biosynthesis
THI_2930	PWY-5989	stearate biosynthesis II (bacteria and plants)
THI_2930	PWY-5994	palmitate biosynthesis I (animals and fungi)
THI_2930	PWY-6113	superpathway of mycolate biosynthesis
THI_2930	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
THI_2930	PWY-6519	8-amino-7-oxononanoate biosynthesis I
THI_2930	PWY-6951	THI_2930|THI_2930|YP_003625333.1|GeneID:13878366
THI_2930	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
THI_2930	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
THI_2930	PWYG-321	mycolate biosynthesis
THI_2933	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
THI_2935	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THI_2948	PWY-5686	UMP biosynthesis
THI_2949	PWY-5686	UMP biosynthesis
THI_2952	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
THI_2967	PWY-3221	dTDP-L-rhamnose biosynthesis II
THI_2967	PWY-6808	dTDP-D-forosamine biosynthesis
THI_2967	PWY-6942	dTDP-D-desosamine biosynthesis
THI_2967	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
THI_2967	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
THI_2967	PWY-6974	dTDP-L-olivose biosynthesis
THI_2967	PWY-6976	dTDP-L-mycarose biosynthesis
THI_2967	PWY-7104	dTDP-L-megosamine biosynthesis
THI_2967	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
THI_2967	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
THI_2967	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
THI_2967	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
THI_2967	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
THI_2967	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
THI_2967	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
THI_2967	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
THI_2969	PWY-3221	dTDP-L-rhamnose biosynthesis II
THI_2969	PWY-6808	dTDP-D-forosamine biosynthesis
THI_2969	PWY-6942	dTDP-D-desosamine biosynthesis
THI_2969	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
THI_2969	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
THI_2969	PWY-6974	dTDP-L-olivose biosynthesis
THI_2969	PWY-6976	dTDP-L-mycarose biosynthesis
THI_2969	PWY-7104	dTDP-L-megosamine biosynthesis
THI_2969	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
THI_2969	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
THI_2969	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
THI_2969	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
THI_2969	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
THI_2969	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
THI_2969	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
THI_2969	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
THI_2981	PWY-5988	wound-induced proteolysis I
THI_2981	PWY-6018	seed germination protein turnover
THI_2995	PWY-3781	aerobic respiration I (cytochrome c)
THI_2995	PWY-4521	arsenite oxidation I (respiratory)
THI_2995	PWY-6692	Fe(II) oxidation
THI_2995	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THI_3003	PWY-1361	benzoyl-CoA degradation I (aerobic)
THI_3003	PWY-5109	2-methylbutanoate biosynthesis
THI_3003	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
THI_3003	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
THI_3003	PWY-5177	glutaryl-CoA degradation
THI_3003	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
THI_3003	PWY-6435	4-hydroxybenzoate biosynthesis V
THI_3003	PWY-6583	pyruvate fermentation to butanol I
THI_3003	PWY-6863	pyruvate fermentation to hexanol
THI_3003	PWY-6883	pyruvate fermentation to butanol II
THI_3003	PWY-6944	androstenedione degradation
THI_3003	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
THI_3003	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
THI_3003	PWY-7007	methyl ketone biosynthesis
THI_3003	PWY-7046	4-coumarate degradation (anaerobic)
THI_3003	PWY-7094	fatty acid salvage
THI_3003	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
THI_3003	PWY-735	jasmonic acid biosynthesis
THI_3003	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
THI_3030	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THI_3040	PWY-5674	nitrate reduction IV (dissimilatory)
THI_3044	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THI_3044	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THI_3135	PWY-6683	sulfate reduction III (assimilatory)
THI_3138	PWY-5278	sulfite oxidation III
THI_3138	PWY-5340	sulfate activation for sulfonation
THI_3138	PWY-6683	sulfate reduction III (assimilatory)
THI_3138	PWY-6932	selenate reduction
THI_3139	PWY-5278	sulfite oxidation III
THI_3139	PWY-5340	sulfate activation for sulfonation
THI_3139	PWY-6683	sulfate reduction III (assimilatory)
THI_3139	PWY-6932	selenate reduction
THI_3140	PWY-5194	siroheme biosynthesis
THI_3140	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
THI_3142	PWY-101	photosynthesis light reactions
THI_3142	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
THI_3146	PWY-4621	arsenate detoxification II (glutaredoxin)
THI_3154	PWY-6823	molybdenum cofactor biosynthesis
THI_3155	PWY-6823	molybdenum cofactor biosynthesis
THI_3162	PWY-7429	arsenite oxidation II (respiratory)
THI_3163	PWY-7429	arsenite oxidation II (respiratory)
THI_3182	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
THI_3182	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
THI_3195	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
THI_3200	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
THI_3227	PWY-5667	CDP-diacylglycerol biosynthesis I
THI_3227	PWY-5981	CDP-diacylglycerol biosynthesis III
THI_3229	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
THI_3229	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
THI_3230	PWY-5686	UMP biosynthesis
THI_3251	PWY-5971	palmitate biosynthesis II (bacteria and plants)
THI_3251	PWY-5973	<i>cis</i>-vaccenate biosynthesis
THI_3251	PWY-5989	stearate biosynthesis II (bacteria and plants)
THI_3251	PWY-5994	palmitate biosynthesis I (animals and fungi)
THI_3251	PWY-6113	superpathway of mycolate biosynthesis
THI_3251	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
THI_3251	PWY-6519	8-amino-7-oxononanoate biosynthesis I
THI_3251	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
THI_3251	PWYG-321	mycolate biosynthesis
THI_3254	PWY-5971	palmitate biosynthesis II (bacteria and plants)
THI_3254	PWY-5973	<i>cis</i>-vaccenate biosynthesis
THI_3254	PWY-5989	stearate biosynthesis II (bacteria and plants)
THI_3254	PWY-5994	palmitate biosynthesis I (animals and fungi)
THI_3254	PWY-6113	superpathway of mycolate biosynthesis
THI_3254	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
THI_3254	PWY-6519	8-amino-7-oxononanoate biosynthesis I
THI_3254	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
THI_3254	PWYG-321	mycolate biosynthesis
THI_3260	PWY-6123	inosine-5'-phosphate biosynthesis I
THI_3260	PWY-6124	inosine-5'-phosphate biosynthesis II
THI_3260	PWY-7234	inosine-5'-phosphate biosynthesis III
THI_3265	PWY-5074	mevalonate degradation
THI_3269	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
THI_3274	PWY-4381	fatty acid biosynthesis initiation I
THI_3274	PWY-5743	3-hydroxypropanoate cycle
THI_3274	PWY-5744	glyoxylate assimilation
THI_3274	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
THI_3274	PWY-6679	jadomycin biosynthesis
THI_3274	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
THI_3280	PWY-6832	2-aminoethylphosphonate degradation II
THI_3288	PWY-7039	phosphatidate metabolism, as a signaling molecule
THI_3302	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THI_3304	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THI_3313	PWY-5057	L-valine degradation II
THI_3313	PWY-5076	L-leucine degradation III
THI_3313	PWY-5078	L-isoleucine degradation II
THI_3313	PWY-5101	L-isoleucine biosynthesis II
THI_3313	PWY-5103	L-isoleucine biosynthesis III
THI_3313	PWY-5104	L-isoleucine biosynthesis IV
THI_3313	PWY-5108	L-isoleucine biosynthesis V
THI_3315	PWY-5381	pyridine nucleotide cycling (plants)
THI_3315	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
THI_3315	PWY-6596	adenosine nucleotides degradation I
THI_3315	PWY-6606	guanosine nucleotides degradation II
THI_3315	PWY-6607	guanosine nucleotides degradation I
THI_3315	PWY-6608	guanosine nucleotides degradation III
THI_3315	PWY-7185	UTP and CTP dephosphorylation I
THI_3332	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
THI_3332	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
THI_3332	PWY-6164	3-dehydroquinate biosynthesis I
THI_3344	PWY-6728	methylaspartate cycle
THI_3344	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THI_3344	PWY-7118	chitin degradation to ethanol
THI_3344	PWY-7294	xylose degradation IV
THI_3344	PWY-7295	L-arabinose degradation IV
THI_3350	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
THI_3350	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
THI_3350	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
THI_3351	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
THI_3351	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
THI_3355	PWY-2201	folate transformations I
THI_3355	PWY-3841	folate transformations II
THI_3361	PWY-5344	L-homocysteine biosynthesis
THI_3361	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
THI_3385	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
THI_3385	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
THI_3385	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
THI_3398	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
THI_3398	PWY-6148	tetrahydromethanopterin biosynthesis
THI_3398	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
THI_3398	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
THI_3415	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
THI_3415	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
THI_3415	PWY-6164	3-dehydroquinate biosynthesis I
THI_3462	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
THI_3487	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
THI_3490	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
THI_3490	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
THI_3490	PWY-6148	tetrahydromethanopterin biosynthesis
THI_3493	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
THI_3493	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
THI_3493	PWY-6936	seleno-amino acid biosynthesis
THI_3493	PWY-702	L-methionine biosynthesis II
THI_3526	PWY-6825	phosphatidylcholine biosynthesis V
THI_3549	PWY-1361	benzoyl-CoA degradation I (aerobic)
THI_3549	PWY-2361	3-oxoadipate degradation
THI_3549	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
THI_3556	PWY-1341	phenylacetate degradation II (anaerobic)
THI_3556	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
THI_3559	PWY-1361	benzoyl-CoA degradation I (aerobic)
THI_3559	PWY-5109	2-methylbutanoate biosynthesis
THI_3559	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
THI_3559	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
THI_3559	PWY-5177	glutaryl-CoA degradation
THI_3559	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
THI_3559	PWY-6435	4-hydroxybenzoate biosynthesis V
THI_3559	PWY-6583	pyruvate fermentation to butanol I
THI_3559	PWY-6863	pyruvate fermentation to hexanol
THI_3559	PWY-6883	pyruvate fermentation to butanol II
THI_3559	PWY-6944	androstenedione degradation
THI_3559	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
THI_3559	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
THI_3559	PWY-7007	methyl ketone biosynthesis
THI_3559	PWY-7046	4-coumarate degradation (anaerobic)
THI_3559	PWY-7094	fatty acid salvage
THI_3559	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
THI_3559	PWY-735	jasmonic acid biosynthesis
THI_3559	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
THI_3578	PWY-5704	urea degradation II
THI_3579	PWY-5704	urea degradation II
THI_3580	PWY-5704	urea degradation II
THI_3594	PWY-5194	siroheme biosynthesis
THI_3594	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
THI_3598	PWY-6683	sulfate reduction III (assimilatory)
THI_3603	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
THI_3626	PWY-3982	uracil degradation I (reductive)
THI_3626	PWY-6430	thymine degradation
THI_3634	PWY-7142	cyanide detoxification II
THI_3642	PWY-5169	cyanurate degradation
THI_3642	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
THI_3655	PWY-6167	flavin biosynthesis II (archaea)
THI_3695	PWY-5169	cyanurate degradation
THI_3695	PWY-5703	urea degradation I
THI_3695	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
THI_3696	PWY-5169	cyanurate degradation
THI_3696	PWY-5703	urea degradation I
THI_3730	PWY-5958	acridone alkaloid biosynthesis
THI_3730	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
THI_3730	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
THI_3731	PWY-5958	acridone alkaloid biosynthesis
THI_3731	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
THI_3731	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
THI_3733	PWY-2002	isoflavonoid biosynthesis I
THI_3733	PWY-5059	pinobanksin biosynthesis
THI_3733	PWY-6325	echinatin biosynthesis
THI_3733	PWY-6787	flavonoid biosynthesis (in equisetum)
THI_3733	PWY-7397	naringenin biosynthesis (engineered)
THI_3735	PWY-181	photorespiration
THI_3736	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
THI_3736	PWY-5723	Rubisco shunt
THI_3745	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
THI_3745	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
THI_3777	PWY-6655	xanthan biosynthesis
THI_3777	PWY-6658	acetan biosynthesis
