TMO_a0008	PWY-723	alkylnitronates degradation
TMO_a0012	PWY-31	canavanine degradation
TMO_a0012	PWY-4984	urea cycle
TMO_a0012	PWY-6305	putrescine biosynthesis IV
TMO_a0012	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
TMO_a0050	PWY-5451	acetone degradation I (to methylglyoxal)
TMO_a0050	PWY-6588	pyruvate fermentation to acetone
TMO_a0050	PWY-6876	isopropanol biosynthesis
TMO_a0050	PWY-7466	acetone degradation III (to propane-1,2-diol)
TMO_a0107	PWY-2661	trehalose biosynthesis V
TMO_a0146	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
TMO_a0146	PWY-5389	3-methylthiopropanoate biosynthesis
TMO_a0147	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
TMO_a0156	PWY-4381	fatty acid biosynthesis initiation I
TMO_a0156	PWY-5743	3-hydroxypropanoate cycle
TMO_a0156	PWY-5744	glyoxylate assimilation
TMO_a0156	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
TMO_a0156	PWY-6679	jadomycin biosynthesis
TMO_a0156	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
TMO_a0184	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
TMO_a0184	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
TMO_a0211	PWY-5941	glycogen degradation II (eukaryotic)
TMO_a0211	PWY-6724	starch degradation II
TMO_a0211	PWY-6737	starch degradation V
TMO_a0211	PWY-7238	sucrose biosynthesis II
TMO_a0212	PWY-2661	trehalose biosynthesis V
TMO_a0213	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
TMO_a0213	PWY-622	starch biosynthesis
TMO_a0214	PWY-2622	trehalose biosynthesis IV
TMO_a0224	PWY-6174	mevalonate pathway II (archaea)
TMO_a0224	PWY-7391	isoprene biosynthesis II (engineered)
TMO_a0224	PWY-7524	mevalonate pathway III (archaea)
TMO_a0224	PWY-922	mevalonate pathway I
TMO_a0249	PWY-2723	trehalose degradation V
TMO_a0249	PWY-6317	galactose degradation I (Leloir pathway)
TMO_a0249	PWY-6737	starch degradation V
TMO_a0254	PWY-5101	L-isoleucine biosynthesis II
TMO_a0254	PWY-5103	L-isoleucine biosynthesis III
TMO_a0254	PWY-5104	L-isoleucine biosynthesis IV
TMO_a0254	PWY-7111	pyruvate fermentation to isobutanol (engineered)
TMO_a0278	PWY-5663	tetrahydrobiopterin biosynthesis I
TMO_a0278	PWY-5664	tetrahydrobiopterin biosynthesis II
TMO_a0278	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
TMO_a0278	PWY-6703	preQ<sub>0</sub> biosynthesis
TMO_a0278	PWY-6983	tetrahydrobiopterin biosynthesis III
TMO_a0278	PWY-7442	drosopterin and aurodrosopterin biosynthesis
TMO_a0282	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TMO_a0282	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
TMO_a0285	PWY-6871	3-methylbutanol biosynthesis
TMO_a0332	PWY-3781	aerobic respiration I (cytochrome c)
TMO_a0332	PWY-4521	arsenite oxidation I (respiratory)
TMO_a0332	PWY-6692	Fe(II) oxidation
TMO_a0332	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
TMO_a0347	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
TMO_a0378	PWY-5033	nicotinate degradation II
TMO_a0378	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TMO_a0378	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
TMO_a0378	PWY-6993	nicotine degradation II (pyrrolidine pathway)
TMO_a0378	PWY-722	nicotinate degradation I
TMO_a0393	PWY-5386	methylglyoxal degradation I
TMO_a0408	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TMO_a0408	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
TMO_a0409	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TMO_a0409	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
TMO_a0414	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
TMO_a0435	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
TMO_a0435	PWY-7494	choline degradation IV
TMO_a0448	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
TMO_a0448	PWY-581	indole-3-acetate biosynthesis II
TMO_a0448	PWY-7308	acrylonitrile degradation I
TMO_a0449	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
TMO_a0449	PWY-581	indole-3-acetate biosynthesis II
TMO_a0449	PWY-7308	acrylonitrile degradation I
TMO_a0450	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
TMO_a0450	PWY-581	indole-3-acetate biosynthesis II
TMO_a0450	PWY-7308	acrylonitrile degradation I
TMO_a0454	PWY-4381	fatty acid biosynthesis initiation I
TMO_a0454	PWY-5743	3-hydroxypropanoate cycle
TMO_a0454	PWY-5744	glyoxylate assimilation
TMO_a0454	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
TMO_a0454	PWY-6679	jadomycin biosynthesis
TMO_a0454	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
TMO_a0483	PWY-1042	glycolysis IV (plant cytosol)
TMO_a0483	PWY-5484	glycolysis II (from fructose 6-phosphate)
TMO_a0483	PWY-6901	superpathway of glucose and xylose degradation
TMO_a0483	PWY-7003	glycerol degradation to butanol
TMO_a0518	PWY-4381	fatty acid biosynthesis initiation I
TMO_a0549	PWY-7426	mannosyl-glycoprotein <i>N</i>-acetylglucosaminyltransferases
TMO_a0560	PWY-5642	2,4-dinitrotoluene degradation
TMO_a0560	PWY-6373	acrylate degradation
TMO_a0600	PWY-5506	methanol oxidation to formaldehyde IV