Tpau_0006	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Tpau_0006	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Tpau_0006	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Tpau_0006	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Tpau_0026	PWY-5958	acridone alkaloid biosynthesis
Tpau_0026	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Tpau_0026	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Tpau_0048	PWY-6857	retinol biosynthesis
Tpau_0055	PWY-3221	dTDP-L-rhamnose biosynthesis II
Tpau_0055	PWY-6808	dTDP-D-forosamine biosynthesis
Tpau_0055	PWY-6942	dTDP-D-desosamine biosynthesis
Tpau_0055	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Tpau_0055	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Tpau_0055	PWY-6974	dTDP-L-olivose biosynthesis
Tpau_0055	PWY-6976	dTDP-L-mycarose biosynthesis
Tpau_0055	PWY-7104	dTDP-L-megosamine biosynthesis
Tpau_0055	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Tpau_0055	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Tpau_0055	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Tpau_0055	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Tpau_0055	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Tpau_0055	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Tpau_0055	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Tpau_0055	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Tpau_0087	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Tpau_0087	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Tpau_0095	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Tpau_0095	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Tpau_0095	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Tpau_0095	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Tpau_0099	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Tpau_0099	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Tpau_0113	PWY-5901	2,3-dihydroxybenzoate biosynthesis
Tpau_0126	PWY-6854	ethylene biosynthesis III (microbes)
Tpau_0145	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Tpau_0149	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Tpau_0161	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Tpau_0161	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Tpau_0172	PWY-43	putrescine biosynthesis II
Tpau_0176	PWY-4381	fatty acid biosynthesis initiation I
Tpau_0176	PWY-5743	3-hydroxypropanoate cycle
Tpau_0176	PWY-5744	glyoxylate assimilation
Tpau_0176	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Tpau_0176	PWY-6679	jadomycin biosynthesis
Tpau_0176	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Tpau_0177	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Tpau_0177	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Tpau_0186	PWY-7310	D-glucosaminate degradation
Tpau_0196	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Tpau_0196	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Tpau_0196	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Tpau_0198	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Tpau_0342	PWY-1361	benzoyl-CoA degradation I (aerobic)
Tpau_0342	PWY-5109	2-methylbutanoate biosynthesis
Tpau_0342	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Tpau_0342	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Tpau_0342	PWY-5177	glutaryl-CoA degradation
Tpau_0342	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Tpau_0342	PWY-6435	4-hydroxybenzoate biosynthesis V
Tpau_0342	PWY-6583	pyruvate fermentation to butanol I
Tpau_0342	PWY-6863	pyruvate fermentation to hexanol
Tpau_0342	PWY-6883	pyruvate fermentation to butanol II
Tpau_0342	PWY-6944	androstenedione degradation
Tpau_0342	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Tpau_0342	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Tpau_0342	PWY-7007	methyl ketone biosynthesis
Tpau_0342	PWY-7046	4-coumarate degradation (anaerobic)
Tpau_0342	PWY-7094	fatty acid salvage
Tpau_0342	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Tpau_0342	PWY-735	jasmonic acid biosynthesis
Tpau_0342	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Tpau_0356	PWY-5392	reductive TCA cycle II
Tpau_0356	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Tpau_0356	PWY-5690	TCA cycle II (plants and fungi)
Tpau_0356	PWY-5913	TCA cycle VI (obligate autotrophs)
Tpau_0356	PWY-6728	methylaspartate cycle
Tpau_0356	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Tpau_0356	PWY-7254	TCA cycle VII (acetate-producers)
Tpau_0356	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Tpau_0372	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Tpau_0418	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Tpau_0449	PWY-5506	methanol oxidation to formaldehyde IV
Tpau_0459	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Tpau_0496	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Tpau_0496	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Tpau_0498	PWY-6349	CDP-archaeol biosynthesis
Tpau_0503	PWY-5686	UMP biosynthesis
Tpau_0511	PWY-1042	glycolysis IV (plant cytosol)
Tpau_0511	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Tpau_0511	PWY-5484	glycolysis II (from fructose 6-phosphate)
Tpau_0511	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Tpau_0511	PWY-7385	1,3-propanediol biosynthesis (engineered)
Tpau_0517	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Tpau_0522	PWY-6454	vancomycin resistance I
Tpau_0522	PWY-6455	vancomycin resistance II
Tpau_0523	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Tpau_0523	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Tpau_0550	PWY-6700	queuosine biosynthesis
Tpau_0553	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Tpau_0553	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Tpau_0556	PWY-6599	guanine and guanosine salvage II
Tpau_0556	PWY-6609	adenine and adenosine salvage III
Tpau_0556	PWY-6610	adenine and adenosine salvage IV
Tpau_0556	PWY-6620	guanine and guanosine salvage
Tpau_0557	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Tpau_0560	PWY-5663	tetrahydrobiopterin biosynthesis I
Tpau_0560	PWY-5664	tetrahydrobiopterin biosynthesis II
Tpau_0560	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Tpau_0560	PWY-6703	preQ<sub>0</sub> biosynthesis
Tpau_0560	PWY-6983	tetrahydrobiopterin biosynthesis III
Tpau_0560	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Tpau_0561	PWY-6614	tetrahydrofolate biosynthesis
Tpau_0562	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Tpau_0562	PWY-6148	tetrahydromethanopterin biosynthesis
Tpau_0562	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Tpau_0562	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Tpau_0563	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Tpau_0563	PWY-6148	tetrahydromethanopterin biosynthesis
Tpau_0563	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Tpau_0563	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Tpau_0568	PWY-5155	&beta;-alanine biosynthesis III
Tpau_0569	PWY-3961	phosphopantothenate biosynthesis II
Tpau_0571	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Tpau_0596	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Tpau_0596	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Tpau_0596	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Tpau_0596	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Tpau_0602	PWY-7560	methylerythritol phosphate pathway II
Tpau_0603	PWY-7560	methylerythritol phosphate pathway II
Tpau_0631	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Tpau_0631	PWY-6855	chitin degradation I (archaea)
Tpau_0631	PWY-6906	chitin derivatives degradation
Tpau_0651	PWY-1622	formaldehyde assimilation I (serine pathway)
Tpau_0651	PWY-5484	glycolysis II (from fructose 6-phosphate)
Tpau_0660	PWY-3341	L-proline biosynthesis III
Tpau_0660	PWY-4981	L-proline biosynthesis II (from arginine)
Tpau_0660	PWY-6344	L-ornithine degradation II (Stickland reaction)
Tpau_0667	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Tpau_0668	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Tpau_0668	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Tpau_0669	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Tpau_0669	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Tpau_0669	PWY-5194	siroheme biosynthesis
Tpau_0669	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Tpau_0670	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Tpau_0670	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Tpau_0678	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Tpau_0678	PWY-6837	fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)
Tpau_0678	PWY-6920	6-gingerol analog biosynthesis
Tpau_0678	PWY-7007	methyl ketone biosynthesis
Tpau_0678	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
Tpau_0678	PWY-7291	oleate &beta;-oxidation (isomerase-dependent, yeast)
Tpau_0678	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
Tpau_0678	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
Tpau_0678	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
Tpau_0678	PWY-735	jasmonic acid biosynthesis
Tpau_0680	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Tpau_0681	PWY-43	putrescine biosynthesis II
Tpau_0687	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Tpau_0701	PWY-5839	menaquinol-7 biosynthesis
Tpau_0701	PWY-5851	demethylmenaquinol-9 biosynthesis
Tpau_0701	PWY-5852	demethylmenaquinol-8 biosynthesis I
Tpau_0701	PWY-5853	demethylmenaquinol-6 biosynthesis I
Tpau_0701	PWY-5890	menaquinol-10 biosynthesis
Tpau_0701	PWY-5891	menaquinol-11 biosynthesis
Tpau_0701	PWY-5892	menaquinol-12 biosynthesis
Tpau_0701	PWY-5895	menaquinol-13 biosynthesis
Tpau_0717	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Tpau_0717	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Tpau_0719	PWY-1361	benzoyl-CoA degradation I (aerobic)
Tpau_0719	PWY-5109	2-methylbutanoate biosynthesis
Tpau_0719	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Tpau_0719	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Tpau_0719	PWY-5177	glutaryl-CoA degradation
Tpau_0719	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Tpau_0719	PWY-6435	4-hydroxybenzoate biosynthesis V
Tpau_0719	PWY-6583	pyruvate fermentation to butanol I
Tpau_0719	PWY-6863	pyruvate fermentation to hexanol
Tpau_0719	PWY-6883	pyruvate fermentation to butanol II
Tpau_0719	PWY-6944	androstenedione degradation
Tpau_0719	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Tpau_0719	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Tpau_0719	PWY-7007	methyl ketone biosynthesis
Tpau_0719	PWY-7046	4-coumarate degradation (anaerobic)
Tpau_0719	PWY-7094	fatty acid salvage
Tpau_0719	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Tpau_0719	PWY-735	jasmonic acid biosynthesis
Tpau_0719	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Tpau_0720	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Tpau_0720	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Tpau_0729	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Tpau_0729	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Tpau_0732	PWY-5839	menaquinol-7 biosynthesis
Tpau_0732	PWY-5844	menaquinol-9 biosynthesis
Tpau_0732	PWY-5849	menaquinol-6 biosynthesis
Tpau_0732	PWY-5890	menaquinol-10 biosynthesis
Tpau_0732	PWY-5891	menaquinol-11 biosynthesis
Tpau_0732	PWY-5892	menaquinol-12 biosynthesis
Tpau_0732	PWY-5895	menaquinol-13 biosynthesis
Tpau_0789	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Tpau_0792	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Tpau_0792	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Tpau_0794	PWY-6906	chitin derivatives degradation
Tpau_0794	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
Tpau_0794	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
Tpau_0795	PWY-7310	D-glucosaminate degradation
Tpau_0796	PWY-7310	D-glucosaminate degradation
Tpau_0800	PWY-723	alkylnitronates degradation
Tpau_0819	PWY-6823	molybdenum cofactor biosynthesis
Tpau_0823	PWY-6823	molybdenum cofactor biosynthesis
Tpau_0842	PWY-5642	2,4-dinitrotoluene degradation
Tpau_0842	PWY-6373	acrylate degradation
Tpau_0849	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Tpau_0849	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Tpau_0860	PWY-4381	fatty acid biosynthesis initiation I
Tpau_0860	PWY-5743	3-hydroxypropanoate cycle
Tpau_0860	PWY-5744	glyoxylate assimilation
Tpau_0860	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Tpau_0860	PWY-6679	jadomycin biosynthesis
Tpau_0860	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Tpau_0871	PWY-6749	CMP-legionaminate biosynthesis I
Tpau_0877	PWY-6938	NADH repair
Tpau_0878	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Tpau_0882	PWY-7158	L-phenylalanine degradation V
Tpau_0906	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Tpau_0906	PWY-6596	adenosine nucleotides degradation I
Tpau_0906	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Tpau_0910	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Tpau_0937	PWY-5750	itaconate biosynthesis
Tpau_0937	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Tpau_0937	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Tpau_0941	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Tpau_0941	PWY-2201	folate transformations I
Tpau_0941	PWY-3841	folate transformations II
Tpau_0941	PWY-5030	L-histidine degradation III
Tpau_0941	PWY-5497	purine nucleobases degradation II (anaerobic)
Tpau_0941	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Tpau_0944	PWY-5344	L-homocysteine biosynthesis
Tpau_0964	PWY-3781	aerobic respiration I (cytochrome c)
Tpau_0964	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Tpau_0964	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Tpau_0964	PWY-5690	TCA cycle II (plants and fungi)
Tpau_0964	PWY-6728	methylaspartate cycle
Tpau_0964	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Tpau_0964	PWY-7254	TCA cycle VII (acetate-producers)
Tpau_0964	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Tpau_0965	PWY-3781	aerobic respiration I (cytochrome c)
Tpau_0965	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Tpau_0965	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Tpau_0965	PWY-5690	TCA cycle II (plants and fungi)
Tpau_0965	PWY-6728	methylaspartate cycle
Tpau_0965	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Tpau_0965	PWY-7254	TCA cycle VII (acetate-producers)
Tpau_0965	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Tpau_0969	PWY-7181	pyrimidine deoxyribonucleosides degradation
Tpau_0976	PWY-6609	adenine and adenosine salvage III
Tpau_0976	PWY-6611	adenine and adenosine salvage V
Tpau_0976	PWY-7179	purine deoxyribonucleosides degradation I
Tpau_0976	PWY-7179-1	purine deoxyribonucleosides degradation
Tpau_0980	PWY-7183	pyrimidine nucleobases salvage I
Tpau_0982	PWY-6749	CMP-legionaminate biosynthesis I
Tpau_0983	PWY-4202	arsenate detoxification I (glutaredoxin)
Tpau_0983	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Tpau_0983	PWY-6608	guanosine nucleotides degradation III
Tpau_0983	PWY-6609	adenine and adenosine salvage III
Tpau_0983	PWY-6611	adenine and adenosine salvage V
Tpau_0983	PWY-6620	guanine and guanosine salvage
Tpau_0983	PWY-6627	salinosporamide A biosynthesis
Tpau_0983	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Tpau_0983	PWY-7179	purine deoxyribonucleosides degradation I
Tpau_0983	PWY-7179-1	purine deoxyribonucleosides degradation
Tpau_0988	PWY-4041	&gamma;-glutamyl cycle
Tpau_0996	PWY-6317	galactose degradation I (Leloir pathway)
Tpau_0996	PWY-6527	stachyose degradation
Tpau_0997	PWY-3821	galactose degradation III
Tpau_0997	PWY-6317	galactose degradation I (Leloir pathway)
Tpau_0997	PWY-6527	stachyose degradation
Tpau_0998	PWY-6807	xyloglucan degradation II (exoglucanase)
Tpau_1006	PWY-4261	glycerol degradation I
Tpau_1006	PWY-6118	glycerol-3-phosphate shuttle
Tpau_1006	PWY-6952	glycerophosphodiester degradation
Tpau_1034	PWY-5350	thiosulfate disproportionation III (rhodanese)
Tpau_1037	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Tpau_1037	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Tpau_1037	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Tpau_1037	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Tpau_1043	PWY-4381	fatty acid biosynthesis initiation I
Tpau_1043	PWY-5743	3-hydroxypropanoate cycle
Tpau_1043	PWY-5744	glyoxylate assimilation
Tpau_1043	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Tpau_1043	PWY-6679	jadomycin biosynthesis
Tpau_1043	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Tpau_1044	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Tpau_1044	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Tpau_1050	PWY-6123	inosine-5'-phosphate biosynthesis I
Tpau_1050	PWY-7234	inosine-5'-phosphate biosynthesis III
Tpau_1075	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Tpau_1075	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Tpau_1075	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Tpau_1075	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Tpau_1075	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Tpau_1075	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Tpau_1097	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Tpau_1111	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Tpau_1111	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Tpau_1111	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Tpau_1128	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Tpau_1148	PWY-5198	factor 420 biosynthesis
Tpau_1163	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Tpau_1163	PWY-5143	long-chain fatty acid activation
Tpau_1163	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
Tpau_1163	PWY-5885	wax esters biosynthesis II
Tpau_1163	PWY-5972	stearate biosynthesis I (animals and fungi)
Tpau_1163	PWY-5995	linoleate biosynthesis I (plants)
Tpau_1163	PWY-6000	&gamma;-linolenate biosynthesis II (animals)
Tpau_1163	PWY-6001	linoleate biosynthesis II (animals)
Tpau_1163	PWY-6803	phosphatidylcholine acyl editing
Tpau_1163	PWY-6873	long chain fatty acid ester synthesis for microdiesel production
Tpau_1163	PWY-6920	6-gingerol analog biosynthesis
Tpau_1163	PWY-6951	Tpau_1163
Tpau_1163	PWY-7033	alkane biosynthesis II
Tpau_1163	PWY-7035	(<i>Z</i>)-9-tricosene biosynthesis
Tpau_1163	PWY-7049	icosapentaenoate biosynthesis II (metazoa)
Tpau_1163	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Tpau_1163	PWY-7094	fatty acid salvage
Tpau_1163	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
Tpau_1164	PWY-6614	tetrahydrofolate biosynthesis
Tpau_1174	PWY-622	starch biosynthesis
Tpau_1175	PWY-622	starch biosynthesis
Tpau_1182	PWY-5199	factor 420 polyglutamylation
Tpau_1183	PWY-5198	factor 420 biosynthesis
Tpau_1187	PWY-6749	CMP-legionaminate biosynthesis I
Tpau_1189	PWY-3861	mannitol degradation II
Tpau_1189	PWY-3881	mannitol biosynthesis
Tpau_1189	PWY-5659	GDP-mannose biosynthesis
Tpau_1189	PWY-7456	mannan degradation
Tpau_1189	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Tpau_1192	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Tpau_1211	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Tpau_1229	PWY-2941	L-lysine biosynthesis II
Tpau_1229	PWY-2942	L-lysine biosynthesis III
Tpau_1229	PWY-5097	L-lysine biosynthesis VI
Tpau_1232	PWY-702	L-methionine biosynthesis II
Tpau_1233	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Tpau_1247	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Tpau_1247	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Tpau_1247	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Tpau_1253	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Tpau_1255	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Tpau_1258	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Tpau_1258	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Tpau_1258	PWY-6268	adenosylcobalamin salvage from cobalamin
Tpau_1258	PWY-6269	adenosylcobalamin salvage from cobinamide II
Tpau_1259	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Tpau_1259	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Tpau_1264	PWY-5743	3-hydroxypropanoate cycle
Tpau_1264	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Tpau_1264	PWY-6728	methylaspartate cycle
Tpau_1264	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Tpau_1278	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Tpau_1278	PWY-622	starch biosynthesis
Tpau_1286	PWY-5381	pyridine nucleotide cycling (plants)
Tpau_1291	PWY-6936	seleno-amino acid biosynthesis
Tpau_1295	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Tpau_1310	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Tpau_1315	PWY-4381	fatty acid biosynthesis initiation I
Tpau_1315	PWY-5142	acyl-ACP thioesterase pathway
Tpau_1315	PWY-5147	oleate biosynthesis I (plants)
Tpau_1315	PWY-5366	palmitoleate biosynthesis II (plants and bacteria)
Tpau_1315	PWY-5367	petroselinate biosynthesis
Tpau_1315	PWY-5966	fatty acid biosynthesis initiation II
Tpau_1315	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Tpau_1315	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Tpau_1315	PWY-5989	stearate biosynthesis II (bacteria and plants)
Tpau_1315	PWY-5994	palmitate biosynthesis I (animals and fungi)
Tpau_1315	PWY-6113	superpathway of mycolate biosynthesis
Tpau_1315	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Tpau_1315	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Tpau_1315	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Tpau_1315	PWY-7096	triclosan resistance
Tpau_1315	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Tpau_1315	PWYG-321	mycolate biosynthesis
Tpau_1316	PWY-6012	acyl carrier protein metabolism I
Tpau_1316	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Tpau_1317	PWY-4381	fatty acid biosynthesis initiation I
Tpau_1317	PWY-5743	3-hydroxypropanoate cycle
Tpau_1317	PWY-5744	glyoxylate assimilation
Tpau_1317	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Tpau_1317	PWY-6679	jadomycin biosynthesis
Tpau_1317	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Tpau_1343	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Tpau_1343	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Tpau_1352	PWY-6857	retinol biosynthesis
Tpau_1367	PWY-5642	2,4-dinitrotoluene degradation
Tpau_1367	PWY-6373	acrylate degradation
Tpau_1368	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Tpau_1377	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Tpau_1377	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Tpau_1378	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Tpau_1380	PWY-6683	sulfate reduction III (assimilatory)
Tpau_1385	PWY-5022	4-aminobutanoate degradation V
Tpau_1385	PWY-6728	methylaspartate cycle
Tpau_1385	PWY-7126	ethylene biosynthesis IV
Tpau_1398	PWY-4061	glutathione-mediated detoxification I
Tpau_1398	PWY-6842	glutathione-mediated detoxification II
Tpau_1398	PWY-7112	4-hydroxy-2-nonenal detoxification
Tpau_1401	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Tpau_1401	PWY-5723	Rubisco shunt
Tpau_1417	PWY-40	putrescine biosynthesis I
Tpau_1417	PWY-6305	putrescine biosynthesis IV
Tpau_1469	PWY-2161	folate polyglutamylation
Tpau_1471	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Tpau_1471	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Tpau_1471	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Tpau_1471	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Tpau_1471	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Tpau_1471	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Tpau_1471	PWY-7205	CMP phosphorylation
Tpau_1471	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Tpau_1471	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Tpau_1471	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Tpau_1471	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Tpau_1471	PWY-7224	purine deoxyribonucleosides salvage
Tpau_1471	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Tpau_1471	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Tpau_1484	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Tpau_1484	PWY-6416	quinate degradation II
Tpau_1484	PWY-6707	gallate biosynthesis
Tpau_1493	PWY-6654	phosphopantothenate biosynthesis III
Tpau_1494	PWY-5381	pyridine nucleotide cycling (plants)
Tpau_1494	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Tpau_1497	PWY-381	nitrate reduction II (assimilatory)
Tpau_1497	PWY-5675	nitrate reduction V (assimilatory)
Tpau_1497	PWY-6549	L-glutamine biosynthesis III
Tpau_1497	PWY-6963	ammonia assimilation cycle I
Tpau_1497	PWY-6964	ammonia assimilation cycle II
Tpau_1510	PWY-381	nitrate reduction II (assimilatory)
Tpau_1510	PWY-5675	nitrate reduction V (assimilatory)
Tpau_1510	PWY-6549	L-glutamine biosynthesis III
Tpau_1510	PWY-6963	ammonia assimilation cycle I
Tpau_1510	PWY-6964	ammonia assimilation cycle II
Tpau_1513	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Tpau_1513	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Tpau_1513	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Tpau_1515	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Tpau_1515	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Tpau_1518	PWY-5988	wound-induced proteolysis I
Tpau_1518	PWY-6018	seed germination protein turnover
Tpau_1520	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Tpau_1521	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Tpau_1521	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Tpau_1524	PWY-5057	L-valine degradation II
Tpau_1524	PWY-5076	L-leucine degradation III
Tpau_1524	PWY-5078	L-isoleucine degradation II
Tpau_1524	PWY-5101	L-isoleucine biosynthesis II
Tpau_1524	PWY-5103	L-isoleucine biosynthesis III
Tpau_1524	PWY-5104	L-isoleucine biosynthesis IV
Tpau_1524	PWY-5108	L-isoleucine biosynthesis V
Tpau_1526	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Tpau_1526	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Tpau_1526	PWY-6269	adenosylcobalamin salvage from cobinamide II
Tpau_1527	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Tpau_1527	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Tpau_1527	PWY-6269	adenosylcobalamin salvage from cobinamide II
Tpau_1538	PWY-3781	aerobic respiration I (cytochrome c)
Tpau_1538	PWY-4521	arsenite oxidation I (respiratory)
Tpau_1538	PWY-6692	Fe(II) oxidation
Tpau_1538	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Tpau_1556	PWY-6409	pyoverdine I biosynthesis
Tpau_1556	PWY-6562	norspermidine biosynthesis
Tpau_1556	PWY-761	rhizobactin 1021 biosynthesis
Tpau_1595	PWY-5169	cyanurate degradation
Tpau_1595	PWY-5703	urea degradation I
Tpau_1595	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Tpau_1616	PWY-4321	L-glutamate degradation IV
Tpau_1620	PWY-6829	tRNA methylation (yeast)
Tpau_1620	PWY-7285	methylwyosine biosynthesis
Tpau_1620	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Tpau_1682	PWY-7560	methylerythritol phosphate pathway II
Tpau_1684	PWY-7560	methylerythritol phosphate pathway II
Tpau_1698	PWY-7254	TCA cycle VII (acetate-producers)
Tpau_1701	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Tpau_1701	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Tpau_1701	PWY-6268	adenosylcobalamin salvage from cobalamin
Tpau_1701	PWY-6269	adenosylcobalamin salvage from cobinamide II
Tpau_1703	PWY-5194	siroheme biosynthesis
Tpau_1703	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Tpau_1726	PWY-6012	acyl carrier protein metabolism I
Tpau_1726	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Tpau_1733	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Tpau_1733	PWY-6167	flavin biosynthesis II (archaea)
Tpau_1733	PWY-6168	flavin biosynthesis III (fungi)
Tpau_1756	PWY-2941	L-lysine biosynthesis II
Tpau_1756	PWY-2942	L-lysine biosynthesis III
Tpau_1756	PWY-5097	L-lysine biosynthesis VI
Tpau_1760	PWY-3841	folate transformations II
Tpau_1760	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Tpau_1760	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Tpau_1760	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Tpau_1760	PWY-7199	pyrimidine deoxyribonucleosides salvage
Tpau_1760	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Tpau_1761	PWY-3841	folate transformations II
Tpau_1761	PWY-6614	tetrahydrofolate biosynthesis
Tpau_1762	PWY-2941	L-lysine biosynthesis II
Tpau_1762	PWY-2942	L-lysine biosynthesis III
Tpau_1762	PWY-5097	L-lysine biosynthesis VI
Tpau_1775	PWY-5269	cardiolipin biosynthesis II
Tpau_1775	PWY-5668	cardiolipin biosynthesis I
Tpau_1798	PWY-2781	<i>cis</i>-zeatin biosynthesis
Tpau_1799	PWY-2941	L-lysine biosynthesis II
Tpau_1799	PWY-5097	L-lysine biosynthesis VI
Tpau_1830	PWY-3821	galactose degradation III
Tpau_1830	PWY-6317	galactose degradation I (Leloir pathway)
Tpau_1830	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Tpau_1830	PWY-6527	stachyose degradation
Tpau_1830	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Tpau_1830	PWY-7344	UDP-D-galactose biosynthesis
Tpau_1833	PWY-5392	reductive TCA cycle II
Tpau_1833	PWY-5537	pyruvate fermentation to acetate V
Tpau_1833	PWY-5538	pyruvate fermentation to acetate VI
Tpau_1833	PWY-5690	TCA cycle II (plants and fungi)
Tpau_1833	PWY-5913	TCA cycle VI (obligate autotrophs)
Tpau_1833	PWY-6728	methylaspartate cycle
Tpau_1833	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Tpau_1833	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Tpau_1872	PWY-4381	fatty acid biosynthesis initiation I
Tpau_1872	PWY-5743	3-hydroxypropanoate cycle
Tpau_1872	PWY-5744	glyoxylate assimilation
Tpau_1872	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Tpau_1872	PWY-6679	jadomycin biosynthesis
Tpau_1872	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Tpau_1884	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Tpau_1884	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Tpau_1884	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Tpau_1884	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Tpau_1889	PWY-6891	thiazole biosynthesis II (Bacillus)
Tpau_1889	PWY-6892	thiazole biosynthesis I (E. coli)
Tpau_1889	PWY-7560	methylerythritol phosphate pathway II
Tpau_1892	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Tpau_1892	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Tpau_1893	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Tpau_1893	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Tpau_1906	PWY-4381	fatty acid biosynthesis initiation I
Tpau_1906	PWY-5743	3-hydroxypropanoate cycle
Tpau_1906	PWY-5744	glyoxylate assimilation
Tpau_1906	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Tpau_1906	PWY-6679	jadomycin biosynthesis
Tpau_1906	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Tpau_1907	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Tpau_1907	PWY-2201	folate transformations I
Tpau_1907	PWY-3841	folate transformations II
Tpau_1907	PWY-5030	L-histidine degradation III
Tpau_1907	PWY-5497	purine nucleobases degradation II (anaerobic)
Tpau_1907	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Tpau_1915	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Tpau_1915	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Tpau_1915	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Tpau_1915	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Tpau_1926	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
Tpau_1930	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
Tpau_1944	PWY-6605	adenine and adenosine salvage II
Tpau_1944	PWY-6610	adenine and adenosine salvage IV
Tpau_1956	PWY-4261	glycerol degradation I
Tpau_1956	PWY-6118	glycerol-3-phosphate shuttle
Tpau_1956	PWY-6952	glycerophosphodiester degradation
Tpau_1958	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Tpau_1958	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Tpau_1978	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Tpau_1978	PWY-6164	3-dehydroquinate biosynthesis I
Tpau_1978	PWY-6416	quinate degradation II
Tpau_1978	PWY-6707	gallate biosynthesis
Tpau_1993	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Tpau_1993	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Tpau_2000	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Tpau_2001	PWY-6348	phosphate acquisition
Tpau_2001	PWY-6357	phosphate utilization in cell wall regeneration
Tpau_2001	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Tpau_2001	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Tpau_2002	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Tpau_2010	PWY-5316	nicotine biosynthesis
Tpau_2010	PWY-7342	superpathway of nicotine biosynthesis
Tpau_2011	PWY-5316	nicotine biosynthesis
Tpau_2011	PWY-7342	superpathway of nicotine biosynthesis
Tpau_2012	PWY-5316	nicotine biosynthesis
Tpau_2012	PWY-5381	pyridine nucleotide cycling (plants)
Tpau_2012	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Tpau_2012	PWY-7342	superpathway of nicotine biosynthesis
Tpau_2026	PWY-5697	allantoin degradation to ureidoglycolate I (urea producing)
Tpau_2026	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
Tpau_2028	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Tpau_2028	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Tpau_2030	PWY-5692	allantoin degradation to glyoxylate II
Tpau_2030	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
Tpau_2035	PWY-5392	reductive TCA cycle II
Tpau_2035	PWY-5537	pyruvate fermentation to acetate V
Tpau_2035	PWY-5538	pyruvate fermentation to acetate VI
Tpau_2035	PWY-5690	TCA cycle II (plants and fungi)
Tpau_2035	PWY-5913	TCA cycle VI (obligate autotrophs)
Tpau_2035	PWY-6728	methylaspartate cycle
Tpau_2035	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Tpau_2035	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Tpau_2044	PWY-5958	acridone alkaloid biosynthesis
Tpau_2044	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Tpau_2044	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Tpau_2082	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Tpau_2082	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Tpau_2082	PWY-5989	stearate biosynthesis II (bacteria and plants)
Tpau_2082	PWY-6113	superpathway of mycolate biosynthesis
Tpau_2082	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Tpau_2082	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Tpau_2082	PWY-7096	triclosan resistance
Tpau_2082	PWYG-321	mycolate biosynthesis
Tpau_2104	PWY-5743	3-hydroxypropanoate cycle
Tpau_2104	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Tpau_2104	PWY-6728	methylaspartate cycle
Tpau_2104	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Tpau_2105	PWY-5743	3-hydroxypropanoate cycle
Tpau_2105	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Tpau_2105	PWY-6728	methylaspartate cycle
Tpau_2105	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Tpau_2109	PWY-4381	fatty acid biosynthesis initiation I
Tpau_2124	PWY-5530	sorbitol biosynthesis II
Tpau_2124	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Tpau_2130	PWY-5686	UMP biosynthesis
Tpau_2135	PWY-2941	L-lysine biosynthesis II
Tpau_2135	PWY-2942	L-lysine biosynthesis III
Tpau_2135	PWY-5097	L-lysine biosynthesis VI
Tpau_2144	PWY-2201	folate transformations I
Tpau_2144	PWY-3841	folate transformations II
Tpau_2152	PWY-6829	tRNA methylation (yeast)
Tpau_2176	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Tpau_2176	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Tpau_2178	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Tpau_2179	PWY-5194	siroheme biosynthesis
Tpau_2179	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Tpau_2192	PWY-6683	sulfate reduction III (assimilatory)
Tpau_2193	PWY-4381	fatty acid biosynthesis initiation I
Tpau_2225	PWY-1361	benzoyl-CoA degradation I (aerobic)
Tpau_2225	PWY-5109	2-methylbutanoate biosynthesis
Tpau_2225	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Tpau_2225	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Tpau_2225	PWY-5177	glutaryl-CoA degradation
Tpau_2225	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Tpau_2225	PWY-6435	4-hydroxybenzoate biosynthesis V
Tpau_2225	PWY-6583	pyruvate fermentation to butanol I
Tpau_2225	PWY-6863	pyruvate fermentation to hexanol
Tpau_2225	PWY-6883	pyruvate fermentation to butanol II
Tpau_2225	PWY-6944	androstenedione degradation
Tpau_2225	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Tpau_2225	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Tpau_2225	PWY-7007	methyl ketone biosynthesis
Tpau_2225	PWY-7046	4-coumarate degradation (anaerobic)
Tpau_2225	PWY-7094	fatty acid salvage
Tpau_2225	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Tpau_2225	PWY-735	jasmonic acid biosynthesis
Tpau_2225	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Tpau_2231	PWY-4381	fatty acid biosynthesis initiation I
Tpau_2253	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Tpau_2256	PWY-6857	retinol biosynthesis
Tpau_2261	PWY-5913	TCA cycle VI (obligate autotrophs)
Tpau_2261	PWY-6549	L-glutamine biosynthesis III
Tpau_2261	PWY-6728	methylaspartate cycle
Tpau_2261	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Tpau_2261	PWY-7124	ethylene biosynthesis V (engineered)
Tpau_2261	PWY-7254	TCA cycle VII (acetate-producers)
Tpau_2261	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Tpau_2291	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Tpau_2291	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Tpau_2291	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Tpau_2291	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Tpau_2316	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Tpau_2316	PWY-6596	adenosine nucleotides degradation I
Tpau_2316	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Tpau_2328	PWY-6728	methylaspartate cycle
Tpau_2328	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Tpau_2328	PWY-7118	chitin degradation to ethanol
Tpau_2328	PWY-7294	xylose degradation IV
Tpau_2328	PWY-7295	L-arabinose degradation IV
Tpau_2335	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Tpau_2335	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Tpau_2335	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Tpau_2335	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Tpau_2341	PWY-5269	cardiolipin biosynthesis II
Tpau_2341	PWY-5668	cardiolipin biosynthesis I
Tpau_2347	PWY-6823	molybdenum cofactor biosynthesis
Tpau_2370	PWY-7205	CMP phosphorylation
Tpau_2377	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Tpau_2377	PWY-7177	UTP and CTP dephosphorylation II
Tpau_2377	PWY-7185	UTP and CTP dephosphorylation I
Tpau_2379	PWY-6898	thiamin salvage III
Tpau_2379	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Tpau_2379	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Tpau_2382	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Tpau_2382	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Tpau_2382	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Tpau_2396	PWY-4983	L-citrulline-nitric oxide cycle
Tpau_2396	PWY-4984	urea cycle
Tpau_2396	PWY-5	canavanine biosynthesis
Tpau_2396	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Tpau_2396	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Tpau_2397	PWY-4983	L-citrulline-nitric oxide cycle
Tpau_2397	PWY-4984	urea cycle
Tpau_2397	PWY-5	canavanine biosynthesis
Tpau_2397	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Tpau_2397	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Tpau_2399	PWY-4981	L-proline biosynthesis II (from arginine)
Tpau_2399	PWY-4984	urea cycle
Tpau_2399	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Tpau_2401	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Tpau_2401	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Tpau_2402	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Tpau_2403	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Tpau_2403	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Tpau_2460	PWY-4061	glutathione-mediated detoxification I
Tpau_2460	PWY-6842	glutathione-mediated detoxification II
Tpau_2460	PWY-7112	4-hydroxy-2-nonenal detoxification
Tpau_2460	PWY-7533	gliotoxin biosynthesis
Tpau_2490	PWY-1042	glycolysis IV (plant cytosol)
Tpau_2490	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Tpau_2490	PWY-5484	glycolysis II (from fructose 6-phosphate)
Tpau_2490	PWY-5723	Rubisco shunt
Tpau_2490	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Tpau_2490	PWY-6886	1-butanol autotrophic biosynthesis
Tpau_2490	PWY-6901	superpathway of glucose and xylose degradation
Tpau_2490	PWY-7003	glycerol degradation to butanol
Tpau_2490	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Tpau_2490	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Tpau_2506	PWY-6823	molybdenum cofactor biosynthesis
Tpau_2506	PWY-6891	thiazole biosynthesis II (Bacillus)
Tpau_2506	PWY-6892	thiazole biosynthesis I (E. coli)
Tpau_2506	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Tpau_2522	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Tpau_2522	PWY-5723	Rubisco shunt
Tpau_2522	PWY-6891	thiazole biosynthesis II (Bacillus)
Tpau_2522	PWY-6892	thiazole biosynthesis I (E. coli)
Tpau_2522	PWY-6901	superpathway of glucose and xylose degradation
Tpau_2522	PWY-7560	methylerythritol phosphate pathway II
Tpau_2523	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Tpau_2523	PWY-5723	Rubisco shunt
Tpau_2524	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Tpau_2526	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Tpau_2526	PWY-6855	chitin degradation I (archaea)
Tpau_2526	PWY-6906	chitin derivatives degradation
Tpau_2536	PWY-1622	formaldehyde assimilation I (serine pathway)
Tpau_2536	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Tpau_2536	PWY-5913	TCA cycle VI (obligate autotrophs)
Tpau_2536	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Tpau_2536	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Tpau_2536	PWY-6549	L-glutamine biosynthesis III
Tpau_2536	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Tpau_2536	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Tpau_2536	PWY-7124	ethylene biosynthesis V (engineered)
Tpau_2538	PWY-1042	glycolysis IV (plant cytosol)
Tpau_2538	PWY-5484	glycolysis II (from fructose 6-phosphate)
Tpau_2538	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Tpau_2538	PWY-7003	glycerol degradation to butanol
Tpau_2539	PWY-1042	glycolysis IV (plant cytosol)
Tpau_2539	PWY-5484	glycolysis II (from fructose 6-phosphate)
Tpau_2539	PWY-6886	1-butanol autotrophic biosynthesis
Tpau_2539	PWY-6901	superpathway of glucose and xylose degradation
Tpau_2539	PWY-7003	glycerol degradation to butanol
Tpau_2540	PWY-1042	glycolysis IV (plant cytosol)
Tpau_2540	PWY-5484	glycolysis II (from fructose 6-phosphate)
Tpau_2540	PWY-6901	superpathway of glucose and xylose degradation
Tpau_2540	PWY-7003	glycerol degradation to butanol
Tpau_2546	PWY-4041	&gamma;-glutamyl cycle
Tpau_2546	PWY-5826	hypoglycin biosynthesis
Tpau_2557	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
Tpau_2557	PWY-7494	choline degradation IV
Tpau_2560	PWY-6167	flavin biosynthesis II (archaea)
Tpau_2560	PWY-6168	flavin biosynthesis III (fungi)
Tpau_2561	PWY-6167	flavin biosynthesis II (archaea)
Tpau_2561	PWY-6168	flavin biosynthesis III (fungi)
Tpau_2561	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Tpau_2562	PWY-6167	flavin biosynthesis II (archaea)
Tpau_2562	PWY-6168	flavin biosynthesis III (fungi)
Tpau_2562	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Tpau_2564	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Tpau_2564	PWY-5723	Rubisco shunt
Tpau_2570	PWY-6483	ceramide degradation
Tpau_2570	PWY-7119	sphingolipid recycling and degradation (yeast)
Tpau_2575	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Tpau_2575	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Tpau_2578	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Tpau_2580	PWY-5686	UMP biosynthesis
Tpau_2581	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Tpau_2581	PWY-5686	UMP biosynthesis
Tpau_2581	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Tpau_2582	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Tpau_2582	PWY-5686	UMP biosynthesis
Tpau_2582	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Tpau_2584	PWY-5686	UMP biosynthesis
Tpau_2585	PWY-5686	UMP biosynthesis
Tpau_2586	PWY-7183	pyrimidine nucleobases salvage I
Tpau_2587	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
Tpau_2597	PWY-6857	retinol biosynthesis
Tpau_2613	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Tpau_2614	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
Tpau_2614	PWY-5739	GDP-D-perosamine biosynthesis
Tpau_2614	PWY-5740	GDP-L-colitose biosynthesis
Tpau_2614	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Tpau_2616	PWY-6164	3-dehydroquinate biosynthesis I
Tpau_2617	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Tpau_2618	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Tpau_2641	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Tpau_2645	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Tpau_2645	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Tpau_2646	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Tpau_2646	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Tpau_2646	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Tpau_2646	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Tpau_2648	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Tpau_2648	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Tpau_2649	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Tpau_2649	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Tpau_2649	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Tpau_2650	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Tpau_2650	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Tpau_2661	PWY-2201	folate transformations I
Tpau_2661	PWY-3841	folate transformations II
Tpau_2672	PWY-6164	3-dehydroquinate biosynthesis I
Tpau_2712	PWY-5663	tetrahydrobiopterin biosynthesis I
Tpau_2712	PWY-5664	tetrahydrobiopterin biosynthesis II
Tpau_2712	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Tpau_2712	PWY-6703	preQ<sub>0</sub> biosynthesis
Tpau_2712	PWY-6983	tetrahydrobiopterin biosynthesis III
Tpau_2712	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Tpau_2722	PWY-6891	thiazole biosynthesis II (Bacillus)
Tpau_2722	PWY-6892	thiazole biosynthesis I (E. coli)
Tpau_2722	PWY-7560	methylerythritol phosphate pathway II
Tpau_2727	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Tpau_2727	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Tpau_2737	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Tpau_2771	PWY-6683	sulfate reduction III (assimilatory)
Tpau_2773	PWY-5278	sulfite oxidation III
Tpau_2773	PWY-5340	sulfate activation for sulfonation
Tpau_2773	PWY-6683	sulfate reduction III (assimilatory)
Tpau_2773	PWY-6932	selenate reduction
Tpau_2774	PWY-5278	sulfite oxidation III
Tpau_2774	PWY-5340	sulfate activation for sulfonation
Tpau_2774	PWY-6683	sulfate reduction III (assimilatory)
Tpau_2774	PWY-6932	selenate reduction
Tpau_2787	PWY-723	alkylnitronates degradation
Tpau_2808	PWY-5381	pyridine nucleotide cycling (plants)
Tpau_2808	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Tpau_2823	PWY-5451	acetone degradation I (to methylglyoxal)
Tpau_2823	PWY-6588	pyruvate fermentation to acetone
Tpau_2823	PWY-6876	isopropanol biosynthesis
Tpau_2823	PWY-7466	acetone degradation III (to propane-1,2-diol)
Tpau_2828	PWY-4381	fatty acid biosynthesis initiation I
Tpau_2828	PWY-5743	3-hydroxypropanoate cycle
Tpau_2828	PWY-5744	glyoxylate assimilation
Tpau_2828	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Tpau_2828	PWY-6679	jadomycin biosynthesis
Tpau_2828	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Tpau_2839	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Tpau_2839	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Tpau_2839	PWY-6896	thiamin salvage I
Tpau_2839	PWY-6897	thiamin salvage II
Tpau_2841	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Tpau_2841	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Tpau_2842	PWY-5667	CDP-diacylglycerol biosynthesis I
Tpau_2842	PWY-5981	CDP-diacylglycerol biosynthesis III
Tpau_2843	PWY-5198	factor 420 biosynthesis
Tpau_2851	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Tpau_2855	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Tpau_2862	PWY-5101	L-isoleucine biosynthesis II
Tpau_2862	PWY-5103	L-isoleucine biosynthesis III
Tpau_2862	PWY-5104	L-isoleucine biosynthesis IV
Tpau_2862	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Tpau_2863	PWY-5101	L-isoleucine biosynthesis II
Tpau_2863	PWY-5103	L-isoleucine biosynthesis III
Tpau_2863	PWY-5104	L-isoleucine biosynthesis IV
Tpau_2863	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Tpau_2863	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Tpau_2863	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Tpau_2863	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Tpau_2864	PWY-5101	L-isoleucine biosynthesis II
Tpau_2864	PWY-5103	L-isoleucine biosynthesis III
Tpau_2864	PWY-5104	L-isoleucine biosynthesis IV
Tpau_2864	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Tpau_2864	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Tpau_2864	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Tpau_2864	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Tpau_2866	PWY-5101	L-isoleucine biosynthesis II
Tpau_2866	PWY-5103	L-isoleucine biosynthesis III
Tpau_2866	PWY-5104	L-isoleucine biosynthesis IV
Tpau_2866	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Tpau_2871	PWY-1042	glycolysis IV (plant cytosol)
Tpau_2871	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Tpau_2871	PWY-5484	glycolysis II (from fructose 6-phosphate)
Tpau_2871	PWY-7385	1,3-propanediol biosynthesis (engineered)
Tpau_2874	PWY-6803	phosphatidylcholine acyl editing
Tpau_2874	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
Tpau_2874	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
Tpau_2874	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
Tpau_2879	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Tpau_2888	PWY-381	nitrate reduction II (assimilatory)
Tpau_2888	PWY-5675	nitrate reduction V (assimilatory)
Tpau_2888	PWY-6549	L-glutamine biosynthesis III
Tpau_2888	PWY-6963	ammonia assimilation cycle I
Tpau_2888	PWY-6964	ammonia assimilation cycle II
Tpau_2908	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Tpau_2908	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Tpau_2908	PWY-6936	seleno-amino acid biosynthesis
Tpau_2908	PWY-702	L-methionine biosynthesis II
Tpau_2910	PWY-6823	molybdenum cofactor biosynthesis
Tpau_2910	PWY-6891	thiazole biosynthesis II (Bacillus)
Tpau_2910	PWY-6892	thiazole biosynthesis I (E. coli)
Tpau_2910	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Tpau_2919	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Tpau_2919	PWY-622	starch biosynthesis
Tpau_2942	PWY-3781	aerobic respiration I (cytochrome c)
Tpau_2942	PWY-4521	arsenite oxidation I (respiratory)
Tpau_2942	PWY-6692	Fe(II) oxidation
Tpau_2942	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Tpau_2947	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Tpau_2947	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Tpau_2947	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Tpau_2947	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Tpau_2950	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Tpau_2950	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Tpau_2950	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Tpau_2950	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Tpau_2950	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Tpau_2950	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Tpau_2950	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Tpau_2950	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Tpau_2960	PWY-5691	urate degradation to allantoin I
Tpau_2960	PWY-7394	urate degradation to allantoin II
Tpau_2961	PWY-5691	urate degradation to allantoin I
Tpau_2961	PWY-7394	urate degradation to allantoin II
Tpau_2965	PWY-5691	urate degradation to allantoin I
Tpau_2965	PWY-7394	urate degradation to allantoin II
Tpau_2966	PWY-5497	purine nucleobases degradation II (anaerobic)
Tpau_2966	PWY-6606	guanosine nucleotides degradation II
Tpau_2966	PWY-6608	guanosine nucleotides degradation III
Tpau_2966	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Tpau_2969	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Tpau_2969	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Tpau_2969	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Tpau_2969	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Tpau_2969	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Tpau_2969	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Tpau_2969	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Tpau_2969	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Tpau_2984	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
Tpau_3003	PWY-2723	trehalose degradation V
Tpau_3003	PWY-3801	sucrose degradation II (sucrose synthase)
Tpau_3003	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Tpau_3003	PWY-5661	GDP-glucose biosynthesis
Tpau_3003	PWY-5661-1	Tpau_3003
Tpau_3003	PWY-5940	streptomycin biosynthesis
Tpau_3003	PWY-5941	glycogen degradation II (eukaryotic)
Tpau_3003	PWY-622	starch biosynthesis
Tpau_3003	PWY-6731	starch degradation III
Tpau_3003	PWY-6737	starch degradation V
Tpau_3003	PWY-6749	CMP-legionaminate biosynthesis I
Tpau_3003	PWY-7238	sucrose biosynthesis II
Tpau_3003	PWY-7343	UDP-glucose biosynthesis
Tpau_3005	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Tpau_3005	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Tpau_3005	PWY-7242	D-fructuronate degradation
Tpau_3005	PWY-7310	D-glucosaminate degradation
Tpau_3050	PWY-5381	pyridine nucleotide cycling (plants)
Tpau_3051	PWY-5350	thiosulfate disproportionation III (rhodanese)
Tpau_3064	PWY-5941	glycogen degradation II (eukaryotic)
Tpau_3064	PWY-622	starch biosynthesis
Tpau_3064	PWY-6731	starch degradation III
Tpau_3064	PWY-6737	starch degradation V
Tpau_3064	PWY-7238	sucrose biosynthesis II
Tpau_3070	PWY-5642	2,4-dinitrotoluene degradation
Tpau_3070	PWY-6373	acrylate degradation
Tpau_3114	PWY-7560	methylerythritol phosphate pathway II
Tpau_3119	PWY-5484	glycolysis II (from fructose 6-phosphate)
Tpau_3120	PWY-5392	reductive TCA cycle II
Tpau_3120	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Tpau_3120	PWY-5690	TCA cycle II (plants and fungi)
Tpau_3120	PWY-5913	TCA cycle VI (obligate autotrophs)
Tpau_3120	PWY-6728	methylaspartate cycle
Tpau_3120	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Tpau_3120	PWY-7254	TCA cycle VII (acetate-producers)
Tpau_3120	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Tpau_3124	PWY-5392	reductive TCA cycle II
Tpau_3124	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Tpau_3124	PWY-5690	TCA cycle II (plants and fungi)
Tpau_3124	PWY-5913	TCA cycle VI (obligate autotrophs)
Tpau_3124	PWY-6728	methylaspartate cycle
Tpau_3124	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Tpau_3124	PWY-7254	TCA cycle VII (acetate-producers)
Tpau_3124	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Tpau_3129	PWY-5147	oleate biosynthesis I (plants)
Tpau_3130	PWY-1622	formaldehyde assimilation I (serine pathway)
Tpau_3130	PWY-181	photorespiration
Tpau_3130	PWY-2161	folate polyglutamylation
Tpau_3130	PWY-2201	folate transformations I
Tpau_3130	PWY-3661	glycine betaine degradation I
Tpau_3130	PWY-3661-1	glycine betaine degradation II (mammalian)
Tpau_3130	PWY-3841	folate transformations II
Tpau_3130	PWY-5497	purine nucleobases degradation II (anaerobic)
Tpau_3132	PWY-3961	phosphopantothenate biosynthesis II
Tpau_3141	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Tpau_3141	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Tpau_3141	PWY-6164	3-dehydroquinate biosynthesis I
Tpau_3152	PWY-801	L-homocysteine and L-cysteine interconversion
Tpau_3165	PWY-1042	glycolysis IV (plant cytosol)
Tpau_3165	PWY-1622	formaldehyde assimilation I (serine pathway)
Tpau_3165	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Tpau_3165	PWY-5484	glycolysis II (from fructose 6-phosphate)
Tpau_3165	PWY-5723	Rubisco shunt
Tpau_3165	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Tpau_3165	PWY-6886	1-butanol autotrophic biosynthesis
Tpau_3165	PWY-6901	superpathway of glucose and xylose degradation
Tpau_3165	PWY-7003	glycerol degradation to butanol
Tpau_3165	PWY-7124	ethylene biosynthesis V (engineered)
Tpau_3165	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Tpau_3188	PWY-6857	retinol biosynthesis
Tpau_3194	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Tpau_3196	PWY-4202	arsenate detoxification I (glutaredoxin)
Tpau_3196	PWY-4621	arsenate detoxification II (glutaredoxin)
Tpau_3231	PWY-7560	methylerythritol phosphate pathway II
Tpau_3238	PWY-5958	acridone alkaloid biosynthesis
Tpau_3238	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Tpau_3238	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Tpau_3267	PWY-6823	molybdenum cofactor biosynthesis
Tpau_3304	PWY-6123	inosine-5'-phosphate biosynthesis I
Tpau_3304	PWY-6124	inosine-5'-phosphate biosynthesis II
Tpau_3304	PWY-7234	inosine-5'-phosphate biosynthesis III
Tpau_3305	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Tpau_3305	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Tpau_3310	PWY-5392	reductive TCA cycle II
Tpau_3310	PWY-5537	pyruvate fermentation to acetate V
Tpau_3310	PWY-5538	pyruvate fermentation to acetate VI
Tpau_3310	PWY-5690	TCA cycle II (plants and fungi)
Tpau_3310	PWY-5913	TCA cycle VI (obligate autotrophs)
Tpau_3310	PWY-6728	methylaspartate cycle
Tpau_3310	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Tpau_3310	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Tpau_3311	PWY-5392	reductive TCA cycle II
Tpau_3311	PWY-5537	pyruvate fermentation to acetate V
Tpau_3311	PWY-5538	pyruvate fermentation to acetate VI
Tpau_3311	PWY-5690	TCA cycle II (plants and fungi)
Tpau_3311	PWY-5913	TCA cycle VI (obligate autotrophs)
Tpau_3311	PWY-6728	methylaspartate cycle
Tpau_3311	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Tpau_3311	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Tpau_3314	PWY-3461	L-tyrosine biosynthesis II
Tpau_3314	PWY-3462	L-phenylalanine biosynthesis II
Tpau_3314	PWY-6120	L-tyrosine biosynthesis III
Tpau_3314	PWY-6627	salinosporamide A biosynthesis
Tpau_3321	PWY-4381	fatty acid biosynthesis initiation I
Tpau_3321	PWY-5743	3-hydroxypropanoate cycle
Tpau_3321	PWY-5744	glyoxylate assimilation
Tpau_3321	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Tpau_3321	PWY-6679	jadomycin biosynthesis
Tpau_3321	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Tpau_3331	PWY-3461	L-tyrosine biosynthesis II
Tpau_3331	PWY-3462	L-phenylalanine biosynthesis II
Tpau_3331	PWY-6120	L-tyrosine biosynthesis III
Tpau_3331	PWY-6627	salinosporamide A biosynthesis
Tpau_3333	PWY-5278	sulfite oxidation III
Tpau_3333	PWY-5340	sulfate activation for sulfonation
Tpau_3333	PWY-6683	sulfate reduction III (assimilatory)
Tpau_3333	PWY-6932	selenate reduction
Tpau_3334	PWY-5278	sulfite oxidation III
Tpau_3334	PWY-5340	sulfate activation for sulfonation
Tpau_3334	PWY-6683	sulfate reduction III (assimilatory)
Tpau_3334	PWY-6932	selenate reduction
Tpau_3338	PWY-3801	sucrose degradation II (sucrose synthase)
Tpau_3338	PWY-5054	sorbitol biosynthesis I
Tpau_3338	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Tpau_3338	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Tpau_3338	PWY-5659	GDP-mannose biosynthesis
Tpau_3338	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Tpau_3338	PWY-621	sucrose degradation III (sucrose invertase)
Tpau_3338	PWY-622	starch biosynthesis
Tpau_3338	PWY-6531	mannitol cycle
Tpau_3338	PWY-6981	chitin biosynthesis
Tpau_3338	PWY-7238	sucrose biosynthesis II
Tpau_3338	PWY-7347	sucrose biosynthesis III
Tpau_3338	PWY-7385	1,3-propanediol biosynthesis (engineered)
Tpau_3353	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
Tpau_3356	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Tpau_3356	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Tpau_3390	PWY-5344	L-homocysteine biosynthesis
Tpau_3390	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Tpau_3396	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Tpau_3409	PWY-5704	urea degradation II
Tpau_3410	PWY-5704	urea degradation II
Tpau_3411	PWY-5704	urea degradation II
Tpau_3472	PWY-3221	dTDP-L-rhamnose biosynthesis II
Tpau_3472	PWY-6808	dTDP-D-forosamine biosynthesis
Tpau_3472	PWY-6942	dTDP-D-desosamine biosynthesis
Tpau_3472	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Tpau_3472	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Tpau_3472	PWY-6974	dTDP-L-olivose biosynthesis
Tpau_3472	PWY-6976	dTDP-L-mycarose biosynthesis
Tpau_3472	PWY-7104	dTDP-L-megosamine biosynthesis
Tpau_3472	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Tpau_3472	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Tpau_3472	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Tpau_3472	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Tpau_3472	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Tpau_3472	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Tpau_3472	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Tpau_3472	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Tpau_3535	PWY-5147	oleate biosynthesis I (plants)
Tpau_3536	PWY-5147	oleate biosynthesis I (plants)
Tpau_3547	PWY-5350	thiosulfate disproportionation III (rhodanese)
Tpau_3563	PWY-6857	retinol biosynthesis
Tpau_3575	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Tpau_3575	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Tpau_3575	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Tpau_3576	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Tpau_3576	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Tpau_3576	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Tpau_3576	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Tpau_3579	PWY-6840	homoglutathione biosynthesis
Tpau_3579	PWY-7255	ergothioneine biosynthesis I (bacteria)
Tpau_3592	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Tpau_3592	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Tpau_3592	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Tpau_3593	PWY-5278	sulfite oxidation III
Tpau_3593	PWY-5340	sulfate activation for sulfonation
Tpau_3593	PWY-6683	sulfate reduction III (assimilatory)
Tpau_3593	PWY-6932	selenate reduction
Tpau_3594	PWY-5278	sulfite oxidation III
Tpau_3594	PWY-5340	sulfate activation for sulfonation
Tpau_3594	PWY-6683	sulfate reduction III (assimilatory)
Tpau_3594	PWY-6932	selenate reduction
Tpau_3613	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Tpau_3613	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Tpau_3613	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Tpau_3614	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Tpau_3614	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Tpau_3614	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Tpau_3622	PWY-6123	inosine-5'-phosphate biosynthesis I
Tpau_3622	PWY-6124	inosine-5'-phosphate biosynthesis II
Tpau_3622	PWY-7234	inosine-5'-phosphate biosynthesis III
Tpau_3624	PWY-6123	inosine-5'-phosphate biosynthesis I
Tpau_3624	PWY-6124	inosine-5'-phosphate biosynthesis II
Tpau_3624	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Tpau_3624	PWY-7234	inosine-5'-phosphate biosynthesis III
Tpau_3626	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Tpau_3626	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Tpau_3626	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Tpau_3646	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Tpau_3646	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Tpau_3653	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Tpau_3654	PWY-2201	folate transformations I
Tpau_3654	PWY-5497	purine nucleobases degradation II (anaerobic)
Tpau_3667	PWY-1361	benzoyl-CoA degradation I (aerobic)
Tpau_3667	PWY-5109	2-methylbutanoate biosynthesis
Tpau_3667	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Tpau_3667	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Tpau_3667	PWY-5177	glutaryl-CoA degradation
Tpau_3667	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Tpau_3667	PWY-6435	4-hydroxybenzoate biosynthesis V
Tpau_3667	PWY-6583	pyruvate fermentation to butanol I
Tpau_3667	PWY-6863	pyruvate fermentation to hexanol
Tpau_3667	PWY-6883	pyruvate fermentation to butanol II
Tpau_3667	PWY-6944	androstenedione degradation
Tpau_3667	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Tpau_3667	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Tpau_3667	PWY-7007	methyl ketone biosynthesis
Tpau_3667	PWY-7046	4-coumarate degradation (anaerobic)
Tpau_3667	PWY-7094	fatty acid salvage
Tpau_3667	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Tpau_3667	PWY-735	jasmonic acid biosynthesis
Tpau_3667	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Tpau_3668	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Tpau_3674	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Tpau_3674	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Tpau_3683	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Tpau_3683	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Tpau_3683	PWY-5901	2,3-dihydroxybenzoate biosynthesis
Tpau_3683	PWY-6406	salicylate biosynthesis I
Tpau_3684	PWY-5901	2,3-dihydroxybenzoate biosynthesis
Tpau_3686	PWY-5901	2,3-dihydroxybenzoate biosynthesis
Tpau_3707	PWY-6823	molybdenum cofactor biosynthesis
Tpau_3709	PWY-5669	phosphatidylethanolamine biosynthesis I
Tpau_3727	PWY-6840	homoglutathione biosynthesis
Tpau_3727	PWY-7255	ergothioneine biosynthesis I (bacteria)
Tpau_3728	PWY-6854	ethylene biosynthesis III (microbes)
Tpau_3737	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
Tpau_3738	PWY-6910	hydroxymethylpyrimidine salvage
Tpau_3738	PWY-7356	thiamin salvage IV (yeast)
Tpau_3738	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Tpau_3739	PWY-6910	hydroxymethylpyrimidine salvage
Tpau_3739	PWY-7356	thiamin salvage IV (yeast)
Tpau_3739	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Tpau_3746	PWY-6891	thiazole biosynthesis II (Bacillus)
Tpau_3746	PWY-6892	thiazole biosynthesis I (E. coli)
Tpau_3749	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Tpau_3749	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Tpau_3749	PWY-6897	thiamin salvage II
Tpau_3749	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Tpau_3749	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Tpau_3749	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Tpau_3749	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Tpau_3761	PWY-5482	pyruvate fermentation to acetate II
Tpau_3761	PWY-5485	pyruvate fermentation to acetate IV
Tpau_3761	PWY-5497	purine nucleobases degradation II (anaerobic)
Tpau_3762	PWY-1281	sulfoacetaldehyde degradation I
Tpau_3762	PWY-5482	pyruvate fermentation to acetate II
Tpau_3762	PWY-5485	pyruvate fermentation to acetate IV
Tpau_3762	PWY-5497	purine nucleobases degradation II (anaerobic)
Tpau_3762	PWY-6637	sulfolactate degradation II
Tpau_3787	PWY-3221	dTDP-L-rhamnose biosynthesis II
Tpau_3787	PWY-6808	dTDP-D-forosamine biosynthesis
Tpau_3787	PWY-6942	dTDP-D-desosamine biosynthesis
Tpau_3787	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Tpau_3787	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Tpau_3787	PWY-6974	dTDP-L-olivose biosynthesis
Tpau_3787	PWY-6976	dTDP-L-mycarose biosynthesis
Tpau_3787	PWY-7104	dTDP-L-megosamine biosynthesis
Tpau_3787	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Tpau_3787	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Tpau_3787	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Tpau_3787	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Tpau_3787	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Tpau_3787	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Tpau_3787	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Tpau_3787	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Tpau_3800	PWY-5162	2-oxopentenoate degradation
Tpau_3801	PWY-5162	2-oxopentenoate degradation
Tpau_3801	PWY-5436	L-threonine degradation IV
Tpau_3801	PWY-5480	pyruvate fermentation to ethanol I
Tpau_3801	PWY-6587	pyruvate fermentation to ethanol III
Tpau_3801	PWY-7085	triethylamine degradation
Tpau_3801	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Tpau_3808	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
Tpau_3808	PWY-7494	choline degradation IV
Tpau_3814	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Tpau_3814	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Tpau_3815	PWY-723	alkylnitronates degradation
Tpau_3829	PWY-723	alkylnitronates degradation
Tpau_3861	PWY-2582	brassinosteroid biosynthesis II
Tpau_3861	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Tpau_3861	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Tpau_3861	PWY-6948	sitosterol degradation to androstenedione
Tpau_3861	PWY-699	brassinosteroid biosynthesis I
Tpau_3861	PWY-7299	progesterone biosynthesis
Tpau_3916	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Tpau_3916	PWY-7118	chitin degradation to ethanol
Tpau_3950	PWY-6891	thiazole biosynthesis II (Bacillus)
Tpau_3950	PWY-6892	thiazole biosynthesis I (E. coli)
Tpau_3950	PWY-7560	methylerythritol phosphate pathway II
Tpau_3981	PWY-2941	L-lysine biosynthesis II
Tpau_3981	PWY-2942	L-lysine biosynthesis III
Tpau_3981	PWY-5097	L-lysine biosynthesis VI
Tpau_3981	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Tpau_3981	PWY-6559	spermidine biosynthesis II
Tpau_3981	PWY-6562	norspermidine biosynthesis
Tpau_3981	PWY-7153	grixazone biosynthesis
Tpau_3981	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Tpau_3982	PWY-2941	L-lysine biosynthesis II
Tpau_3982	PWY-2942	L-lysine biosynthesis III
Tpau_3982	PWY-5097	L-lysine biosynthesis VI
Tpau_3982	PWY-6559	spermidine biosynthesis II
Tpau_3982	PWY-6562	norspermidine biosynthesis
Tpau_3982	PWY-7153	grixazone biosynthesis
Tpau_3988	PWY-6871	3-methylbutanol biosynthesis
Tpau_4013	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Tpau_4013	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Tpau_4018	PWY-5491	diethylphosphate degradation
Tpau_4044	PWY-6700	queuosine biosynthesis
Tpau_4046	PWY-7153	grixazone biosynthesis
Tpau_4071	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Tpau_4071	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Tpau_4092	PWY-6902	chitin degradation II
Tpau_4110	PWY-6749	CMP-legionaminate biosynthesis I
Tpau_4119	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Tpau_4119	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Tpau_4133	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Tpau_4133	PWY-6416	quinate degradation II
Tpau_4133	PWY-6707	gallate biosynthesis
Tpau_4144	PWY-5147	oleate biosynthesis I (plants)
Tpau_4148	PWY-5331	taurine biosynthesis
Tpau_4183	PWY-1361	benzoyl-CoA degradation I (aerobic)
Tpau_4183	PWY-5109	2-methylbutanoate biosynthesis
Tpau_4183	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Tpau_4183	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Tpau_4183	PWY-5177	glutaryl-CoA degradation
Tpau_4183	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Tpau_4183	PWY-6435	4-hydroxybenzoate biosynthesis V
Tpau_4183	PWY-6583	pyruvate fermentation to butanol I
Tpau_4183	PWY-6863	pyruvate fermentation to hexanol
Tpau_4183	PWY-6883	pyruvate fermentation to butanol II
Tpau_4183	PWY-6944	androstenedione degradation
Tpau_4183	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Tpau_4183	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Tpau_4183	PWY-7007	methyl ketone biosynthesis
Tpau_4183	PWY-7046	4-coumarate degradation (anaerobic)
Tpau_4183	PWY-7094	fatty acid salvage
Tpau_4183	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Tpau_4183	PWY-735	jasmonic acid biosynthesis
Tpau_4183	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Tpau_4186	PWY-723	alkylnitronates degradation
Tpau_4195	PWY-2301	<i>myo</i>-inositol biosynthesis
Tpau_4195	PWY-4661	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis III (<i>Spirodela polyrrhiza</i>)
Tpau_4195	PWY-6372	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis IV (<i>Dictyostelium</i>)
Tpau_4195	PWY-6580	phosphatidylinositol biosynthesis I (bacteria)
Tpau_4195	PWY-6664	di-myo-inositol phosphate biosynthesis
Tpau_4207	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Tpau_4208	PWY-5101	L-isoleucine biosynthesis II
Tpau_4208	PWY-5103	L-isoleucine biosynthesis III
Tpau_4208	PWY-5104	L-isoleucine biosynthesis IV
Tpau_4208	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Tpau_4209	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Tpau_4209	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Tpau_4209	PWY-7242	D-fructuronate degradation
Tpau_4209	PWY-7310	D-glucosaminate degradation
Tpau_4229	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
Tpau_4229	PWY-6853	ethylene biosynthesis II (microbes)
Tpau_4229	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
