Varpa_0057	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Varpa_0057	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Varpa_0059	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Varpa_0059	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Varpa_0059	PWY-6268	adenosylcobalamin salvage from cobalamin
Varpa_0059	PWY-6269	adenosylcobalamin salvage from cobinamide II
Varpa_0083	PWY-6174	mevalonate pathway II (archaea)
Varpa_0083	PWY-7391	isoprene biosynthesis II (engineered)
Varpa_0083	PWY-7524	mevalonate pathway III (archaea)
Varpa_0083	PWY-922	mevalonate pathway I
Varpa_0089	PWY-1361	benzoyl-CoA degradation I (aerobic)
Varpa_0089	PWY-5109	2-methylbutanoate biosynthesis
Varpa_0089	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Varpa_0089	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Varpa_0089	PWY-5177	glutaryl-CoA degradation
Varpa_0089	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Varpa_0089	PWY-6435	4-hydroxybenzoate biosynthesis V
Varpa_0089	PWY-6583	pyruvate fermentation to butanol I
Varpa_0089	PWY-6863	pyruvate fermentation to hexanol
Varpa_0089	PWY-6883	pyruvate fermentation to butanol II
Varpa_0089	PWY-6944	androstenedione degradation
Varpa_0089	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Varpa_0089	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Varpa_0089	PWY-7007	methyl ketone biosynthesis
Varpa_0089	PWY-7046	4-coumarate degradation (anaerobic)
Varpa_0089	PWY-7094	fatty acid salvage
Varpa_0089	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Varpa_0089	PWY-735	jasmonic acid biosynthesis
Varpa_0089	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Varpa_0105	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Varpa_0109	PWY-1361	benzoyl-CoA degradation I (aerobic)
Varpa_0110	PWY-1361	benzoyl-CoA degradation I (aerobic)
Varpa_0111	PWY-101	photosynthesis light reactions
Varpa_0111	PWY-1361	benzoyl-CoA degradation I (aerobic)
Varpa_0111	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Varpa_0116	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Varpa_0116	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Varpa_0127	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Varpa_0141	PWY-3161	indole-3-acetate biosynthesis III (bacteria)
Varpa_0141	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
Varpa_0141	PWY-581	indole-3-acetate biosynthesis II
Varpa_0141	PWY-7308	acrylonitrile degradation I
Varpa_0164	PWY-381	nitrate reduction II (assimilatory)
Varpa_0164	PWY-5675	nitrate reduction V (assimilatory)
Varpa_0164	PWY-6549	L-glutamine biosynthesis III
Varpa_0164	PWY-6963	ammonia assimilation cycle I
Varpa_0164	PWY-6964	ammonia assimilation cycle II
Varpa_0172	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Varpa_0183	PWY-5028	L-histidine degradation II
Varpa_0183	PWY-5030	L-histidine degradation III
Varpa_0184	PWY-5028	L-histidine degradation II
Varpa_0184	PWY-5030	L-histidine degradation III
Varpa_0190	PWY-5028	L-histidine degradation II
Varpa_0190	PWY-5030	L-histidine degradation III
Varpa_0200	PWY-2201	folate transformations I
Varpa_0200	PWY-3841	folate transformations II
Varpa_0226	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Varpa_0226	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Varpa_0227	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Varpa_0227	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Varpa_0233	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Varpa_0237	PWY-6654	phosphopantothenate biosynthesis III
Varpa_0259	PWY-5057	L-valine degradation II
Varpa_0259	PWY-5076	L-leucine degradation III
Varpa_0259	PWY-5078	L-isoleucine degradation II
Varpa_0259	PWY-5101	L-isoleucine biosynthesis II
Varpa_0259	PWY-5103	L-isoleucine biosynthesis III
Varpa_0259	PWY-5104	L-isoleucine biosynthesis IV
Varpa_0259	PWY-5108	L-isoleucine biosynthesis V
Varpa_0271	PWY-5169	cyanurate degradation
Varpa_0271	PWY-5703	urea degradation I
Varpa_0271	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Varpa_0279	PWY-7142	cyanide detoxification II
Varpa_0288	PWY-5686	UMP biosynthesis
Varpa_0291	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Varpa_0312	PWY-5642	2,4-dinitrotoluene degradation
Varpa_0312	PWY-6373	acrylate degradation
Varpa_0314	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
Varpa_0314	PWY-7494	choline degradation IV
Varpa_0331	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Varpa_0335	PWY-4381	fatty acid biosynthesis initiation I
Varpa_0335	PWY-5743	3-hydroxypropanoate cycle
Varpa_0335	PWY-5744	glyoxylate assimilation
Varpa_0335	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Varpa_0335	PWY-6679	jadomycin biosynthesis
Varpa_0335	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Varpa_0354	PWY-4261	glycerol degradation I
Varpa_0393	PWY-4261	glycerol degradation I
Varpa_0394	PWY-4261	glycerol degradation I
Varpa_0394	PWY-6118	glycerol-3-phosphate shuttle
Varpa_0394	PWY-6952	glycerophosphodiester degradation
Varpa_0400	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Varpa_0426	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Varpa_0426	PWY-6153	autoinducer AI-2 biosynthesis I
Varpa_0426	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
Varpa_0435	PWY-2941	L-lysine biosynthesis II
Varpa_0435	PWY-2942	L-lysine biosynthesis III
Varpa_0435	PWY-5097	L-lysine biosynthesis VI
Varpa_0438	PWY-5941	glycogen degradation II (eukaryotic)
Varpa_0438	PWY-622	starch biosynthesis
Varpa_0438	PWY-6731	starch degradation III
Varpa_0438	PWY-6737	starch degradation V
Varpa_0438	PWY-7238	sucrose biosynthesis II
Varpa_0439	PWY-622	starch biosynthesis
Varpa_0440	PWY-622	starch biosynthesis
Varpa_0443	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Varpa_0443	PWY-622	starch biosynthesis
Varpa_0462	PWY-1042	glycolysis IV (plant cytosol)
Varpa_0462	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Varpa_0462	PWY-5484	glycolysis II (from fructose 6-phosphate)
Varpa_0462	PWY-6531	mannitol cycle
Varpa_0462	PWY-7385	1,3-propanediol biosynthesis (engineered)
Varpa_0471	PWY-6728	methylaspartate cycle
Varpa_0471	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Varpa_0471	PWY-7118	chitin degradation to ethanol
Varpa_0471	PWY-7294	xylose degradation IV
Varpa_0471	PWY-7295	L-arabinose degradation IV
Varpa_0517	PWY-5269	cardiolipin biosynthesis II
Varpa_0517	PWY-5668	cardiolipin biosynthesis I
Varpa_0523	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Varpa_0523	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Varpa_0523	PWY-6896	thiamin salvage I
Varpa_0523	PWY-6897	thiamin salvage II
Varpa_0524	PWY-6840	homoglutathione biosynthesis
Varpa_0524	PWY-7255	ergothioneine biosynthesis I (bacteria)
Varpa_0528	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Varpa_0528	PWY-5723	Rubisco shunt
Varpa_0535	PWY-5506	methanol oxidation to formaldehyde IV
Varpa_0537	PWY-3561	choline biosynthesis III
Varpa_0537	PWY-7039	phosphatidate metabolism, as a signaling molecule
Varpa_0599	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Varpa_0599	PWY-6416	quinate degradation II
Varpa_0599	PWY-6707	gallate biosynthesis
Varpa_0608	PWY-7425	2-chloroacrylate degradation I
Varpa_0616	PWY-5692	allantoin degradation to glyoxylate II
Varpa_0616	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
Varpa_0622	PWY-7425	2-chloroacrylate degradation I
Varpa_0626	PWY-181	photorespiration
Varpa_0628	PWY-5958	acridone alkaloid biosynthesis
Varpa_0628	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Varpa_0628	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Varpa_0630	PWY-5958	acridone alkaloid biosynthesis
Varpa_0630	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Varpa_0630	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Varpa_0710	PWY-6420	pyrroloquinoline quinone biosynthesis
Varpa_0717	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Varpa_0717	PWY-6416	quinate degradation II
Varpa_0717	PWY-6707	gallate biosynthesis
Varpa_0734	PWY-5676	acetyl-CoA fermentation to butanoate II
Varpa_0734	PWY-5741	ethylmalonyl-CoA pathway
Varpa_0734	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Varpa_0738	PWY-6803	phosphatidylcholine acyl editing
Varpa_0738	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
Varpa_0738	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
Varpa_0738	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
Varpa_0746	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Varpa_0746	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Varpa_0757	PWY-6167	flavin biosynthesis II (archaea)
Varpa_0771	PWY-3221	dTDP-L-rhamnose biosynthesis II
Varpa_0771	PWY-6808	dTDP-D-forosamine biosynthesis
Varpa_0771	PWY-6942	dTDP-D-desosamine biosynthesis
Varpa_0771	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Varpa_0771	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Varpa_0771	PWY-6974	dTDP-L-olivose biosynthesis
Varpa_0771	PWY-6976	dTDP-L-mycarose biosynthesis
Varpa_0771	PWY-7104	dTDP-L-megosamine biosynthesis
Varpa_0771	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Varpa_0771	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Varpa_0771	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Varpa_0771	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Varpa_0771	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Varpa_0771	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Varpa_0771	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Varpa_0771	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Varpa_0773	PWY-3221	dTDP-L-rhamnose biosynthesis II
Varpa_0773	PWY-6808	dTDP-D-forosamine biosynthesis
Varpa_0773	PWY-6942	dTDP-D-desosamine biosynthesis
Varpa_0773	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Varpa_0773	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Varpa_0773	PWY-6974	dTDP-L-olivose biosynthesis
Varpa_0773	PWY-6976	dTDP-L-mycarose biosynthesis
Varpa_0773	PWY-7104	dTDP-L-megosamine biosynthesis
Varpa_0773	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Varpa_0773	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Varpa_0773	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Varpa_0773	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Varpa_0773	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Varpa_0773	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Varpa_0773	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Varpa_0773	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Varpa_0779	PWY-3821	galactose degradation III
Varpa_0779	PWY-6317	galactose degradation I (Leloir pathway)
Varpa_0779	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Varpa_0779	PWY-6527	stachyose degradation
Varpa_0779	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Varpa_0779	PWY-7344	UDP-D-galactose biosynthesis
Varpa_0797	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Varpa_0797	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Varpa_0797	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Varpa_0798	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Varpa_0798	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Varpa_0837	PWY-1361	benzoyl-CoA degradation I (aerobic)
Varpa_0837	PWY-5109	2-methylbutanoate biosynthesis
Varpa_0837	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Varpa_0837	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Varpa_0837	PWY-5177	glutaryl-CoA degradation
Varpa_0837	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Varpa_0837	PWY-6435	4-hydroxybenzoate biosynthesis V
Varpa_0837	PWY-6583	pyruvate fermentation to butanol I
Varpa_0837	PWY-6863	pyruvate fermentation to hexanol
Varpa_0837	PWY-6883	pyruvate fermentation to butanol II
Varpa_0837	PWY-6944	androstenedione degradation
Varpa_0837	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Varpa_0837	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Varpa_0837	PWY-7007	methyl ketone biosynthesis
Varpa_0837	PWY-7046	4-coumarate degradation (anaerobic)
Varpa_0837	PWY-7094	fatty acid salvage
Varpa_0837	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Varpa_0837	PWY-735	jasmonic acid biosynthesis
Varpa_0837	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Varpa_0849	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Varpa_0851	PWY-5392	reductive TCA cycle II
Varpa_0851	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Varpa_0851	PWY-5690	TCA cycle II (plants and fungi)
Varpa_0851	PWY-5913	TCA cycle VI (obligate autotrophs)
Varpa_0851	PWY-6728	methylaspartate cycle
Varpa_0851	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Varpa_0851	PWY-7254	TCA cycle VII (acetate-producers)
Varpa_0851	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Varpa_0869	PWY-723	alkylnitronates degradation
Varpa_0880	PWY-1361	benzoyl-CoA degradation I (aerobic)
Varpa_0880	PWY-5109	2-methylbutanoate biosynthesis
Varpa_0880	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Varpa_0880	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Varpa_0880	PWY-5177	glutaryl-CoA degradation
Varpa_0880	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Varpa_0880	PWY-6435	4-hydroxybenzoate biosynthesis V
Varpa_0880	PWY-6583	pyruvate fermentation to butanol I
Varpa_0880	PWY-6863	pyruvate fermentation to hexanol
Varpa_0880	PWY-6883	pyruvate fermentation to butanol II
Varpa_0880	PWY-6944	androstenedione degradation
Varpa_0880	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Varpa_0880	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Varpa_0880	PWY-7007	methyl ketone biosynthesis
Varpa_0880	PWY-7046	4-coumarate degradation (anaerobic)
Varpa_0880	PWY-7094	fatty acid salvage
Varpa_0880	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Varpa_0880	PWY-735	jasmonic acid biosynthesis
Varpa_0880	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Varpa_0887	PWY-5694	allantoin degradation to glyoxylate I
Varpa_0887	PWY-5705	allantoin degradation to glyoxylate III
Varpa_0889	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Varpa_0896	PWY-5686	UMP biosynthesis
Varpa_0905	PWY-6936	seleno-amino acid biosynthesis
Varpa_0930	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
Varpa_0944	PWY-5381	pyridine nucleotide cycling (plants)
Varpa_0944	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Varpa_0944	PWY-6596	adenosine nucleotides degradation I
Varpa_0944	PWY-6606	guanosine nucleotides degradation II
Varpa_0944	PWY-6607	guanosine nucleotides degradation I
Varpa_0944	PWY-6608	guanosine nucleotides degradation III
Varpa_0944	PWY-7185	UTP and CTP dephosphorylation I
Varpa_0959	PWY-2941	L-lysine biosynthesis II
Varpa_0959	PWY-5097	L-lysine biosynthesis VI
Varpa_0975	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Varpa_0975	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Varpa_0976	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Varpa_0976	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Varpa_0976	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Varpa_0977	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Varpa_0977	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Varpa_0979	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Varpa_0979	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Varpa_0979	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Varpa_0979	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Varpa_0980	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Varpa_0980	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Varpa_0981	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Varpa_0981	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Varpa_0992	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Varpa_1001	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Varpa_1001	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Varpa_1001	PWY-6164	3-dehydroquinate biosynthesis I
Varpa_1012	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Varpa_1012	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Varpa_1012	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Varpa_1012	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Varpa_1012	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Varpa_1012	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Varpa_1012	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Varpa_1012	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Varpa_1013	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Varpa_1013	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Varpa_1013	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Varpa_1013	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Varpa_1013	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Varpa_1013	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Varpa_1013	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Varpa_1013	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Varpa_1036	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Varpa_1036	PWY-6148	tetrahydromethanopterin biosynthesis
Varpa_1036	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Varpa_1036	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Varpa_1066	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Varpa_1068	PWY-6749	CMP-legionaminate biosynthesis I
Varpa_1085	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Varpa_1101	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
Varpa_1101	PWY-6853	ethylene biosynthesis II (microbes)
Varpa_1101	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Varpa_1106	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Varpa_1106	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Varpa_1108	PWY-2723	trehalose degradation V
Varpa_1108	PWY-6317	galactose degradation I (Leloir pathway)
Varpa_1108	PWY-6737	starch degradation V
Varpa_1120	PWY-5101	L-isoleucine biosynthesis II
Varpa_1120	PWY-5103	L-isoleucine biosynthesis III
Varpa_1120	PWY-5104	L-isoleucine biosynthesis IV
Varpa_1120	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Varpa_1127	PWY-7052	cyanophycin metabolism
Varpa_1128	PWY-7052	cyanophycin metabolism
Varpa_1133	PWY-6703	preQ<sub>0</sub> biosynthesis
Varpa_1152	PWY-5381	pyridine nucleotide cycling (plants)
Varpa_1152	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Varpa_1152	PWY-6596	adenosine nucleotides degradation I
Varpa_1152	PWY-6606	guanosine nucleotides degradation II
Varpa_1152	PWY-6607	guanosine nucleotides degradation I
Varpa_1152	PWY-6608	guanosine nucleotides degradation III
Varpa_1152	PWY-7185	UTP and CTP dephosphorylation I
Varpa_1180	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Varpa_1186	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Varpa_1186	PWY-5723	Rubisco shunt
Varpa_1187	PWY-3801	sucrose degradation II (sucrose synthase)
Varpa_1187	PWY-5054	sorbitol biosynthesis I
Varpa_1187	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Varpa_1187	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Varpa_1187	PWY-5659	GDP-mannose biosynthesis
Varpa_1187	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Varpa_1187	PWY-621	sucrose degradation III (sucrose invertase)
Varpa_1187	PWY-622	starch biosynthesis
Varpa_1187	PWY-6531	mannitol cycle
Varpa_1187	PWY-6981	chitin biosynthesis
Varpa_1187	PWY-7238	sucrose biosynthesis II
Varpa_1187	PWY-7347	sucrose biosynthesis III
Varpa_1187	PWY-7385	1,3-propanediol biosynthesis (engineered)
Varpa_1197	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Varpa_1197	PWY-5723	Rubisco shunt
Varpa_1200	PWY-4261	glycerol degradation I
Varpa_1205	PWY-5686	UMP biosynthesis
Varpa_1212	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Varpa_1212	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Varpa_1222	PWY-2941	L-lysine biosynthesis II
Varpa_1222	PWY-2942	L-lysine biosynthesis III
Varpa_1222	PWY-5097	L-lysine biosynthesis VI
Varpa_1231	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Varpa_1232	PWY-6164	3-dehydroquinate biosynthesis I
Varpa_1249	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Varpa_1249	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Varpa_1262	PWY-2723	trehalose degradation V
Varpa_1262	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Varpa_1262	PWY-5661	GDP-glucose biosynthesis
Varpa_1262	PWY-5940	streptomycin biosynthesis
Varpa_1262	PWY-621	sucrose degradation III (sucrose invertase)
Varpa_1262	PWY-622	starch biosynthesis
Varpa_1262	PWY-6731	starch degradation III
Varpa_1262	PWY-6737	starch degradation V
Varpa_1262	PWY-6981	chitin biosynthesis
Varpa_1262	PWY-7238	sucrose biosynthesis II
Varpa_1262	PWY-7343	UDP-glucose biosynthesis
Varpa_1273	PWY-5663	tetrahydrobiopterin biosynthesis I
Varpa_1273	PWY-5664	tetrahydrobiopterin biosynthesis II
Varpa_1273	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Varpa_1273	PWY-6703	preQ<sub>0</sub> biosynthesis
Varpa_1273	PWY-6983	tetrahydrobiopterin biosynthesis III
Varpa_1273	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Varpa_1279	PWY-3781	aerobic respiration I (cytochrome c)
Varpa_1279	PWY-6692	Fe(II) oxidation
Varpa_1279	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
Varpa_1279	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Varpa_1301	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Varpa_1307	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Varpa_1307	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Varpa_1308	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Varpa_1317	PWY-6825	phosphatidylcholine biosynthesis V
Varpa_1329	PWY-1341	phenylacetate degradation II (anaerobic)
Varpa_1329	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Varpa_1349	PWY-4041	&gamma;-glutamyl cycle
Varpa_1349	PWY-5826	hypoglycin biosynthesis
Varpa_1352	PWY-7426	mannosyl-glycoprotein <i>N</i>-acetylglucosaminyltransferases
Varpa_1370	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Varpa_1370	PWY-6167	flavin biosynthesis II (archaea)
Varpa_1370	PWY-6168	flavin biosynthesis III (fungi)
Varpa_1376	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Varpa_1376	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Varpa_1397	PWY-6936	seleno-amino acid biosynthesis
Varpa_1400	PWY-3801	sucrose degradation II (sucrose synthase)
Varpa_1400	PWY-6527	stachyose degradation
Varpa_1400	PWY-6981	chitin biosynthesis
Varpa_1400	PWY-7238	sucrose biosynthesis II
Varpa_1400	PWY-7343	UDP-glucose biosynthesis
Varpa_1405	PWY-6700	queuosine biosynthesis
Varpa_1418	PWY-5686	UMP biosynthesis
Varpa_1425	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Varpa_1457	PWY-5913	TCA cycle VI (obligate autotrophs)
Varpa_1457	PWY-6549	L-glutamine biosynthesis III
Varpa_1457	PWY-6728	methylaspartate cycle
Varpa_1457	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Varpa_1457	PWY-7124	ethylene biosynthesis V (engineered)
Varpa_1457	PWY-7254	TCA cycle VII (acetate-producers)
Varpa_1457	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Varpa_1466	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Varpa_1469	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Varpa_1501	PWY-4983	L-citrulline-nitric oxide cycle
Varpa_1501	PWY-4984	urea cycle
Varpa_1501	PWY-5	canavanine biosynthesis
Varpa_1501	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Varpa_1501	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Varpa_1512	PWY-1622	formaldehyde assimilation I (serine pathway)
Varpa_1512	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Varpa_1512	PWY-5913	TCA cycle VI (obligate autotrophs)
Varpa_1512	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Varpa_1512	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Varpa_1512	PWY-6549	L-glutamine biosynthesis III
Varpa_1512	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Varpa_1512	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Varpa_1512	PWY-7124	ethylene biosynthesis V (engineered)
Varpa_1513	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Varpa_1513	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Varpa_1514	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Varpa_1514	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Varpa_1530	PWY-4381	fatty acid biosynthesis initiation I
Varpa_1531	PWY-4381	fatty acid biosynthesis initiation I
Varpa_1531	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Varpa_1531	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Varpa_1532	PWY-5367	petroselinate biosynthesis
Varpa_1532	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Varpa_1532	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Varpa_1532	PWY-5989	stearate biosynthesis II (bacteria and plants)
Varpa_1532	PWY-5994	palmitate biosynthesis I (animals and fungi)
Varpa_1532	PWY-6113	superpathway of mycolate biosynthesis
Varpa_1532	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Varpa_1532	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Varpa_1532	PWY-6951	Varpa_1532
Varpa_1532	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Varpa_1532	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Varpa_1532	PWYG-321	mycolate biosynthesis
Varpa_1547	PWY-6012	acyl carrier protein metabolism I
Varpa_1547	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Varpa_1548	PWY-6902	chitin degradation II
Varpa_1558	PWY-4381	fatty acid biosynthesis initiation I
Varpa_1558	PWY-5743	3-hydroxypropanoate cycle
Varpa_1558	PWY-5744	glyoxylate assimilation
Varpa_1558	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Varpa_1558	PWY-6679	jadomycin biosynthesis
Varpa_1558	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Varpa_1564	PWY-2941	L-lysine biosynthesis II
Varpa_1564	PWY-2942	L-lysine biosynthesis III
Varpa_1564	PWY-5097	L-lysine biosynthesis VI
Varpa_1564	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Varpa_1564	PWY-6559	spermidine biosynthesis II
Varpa_1564	PWY-6562	norspermidine biosynthesis
Varpa_1564	PWY-7153	grixazone biosynthesis
Varpa_1564	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Varpa_1565	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Varpa_1571	PWY-3781	aerobic respiration I (cytochrome c)
Varpa_1571	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Varpa_1571	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Varpa_1571	PWY-5690	TCA cycle II (plants and fungi)
Varpa_1571	PWY-6728	methylaspartate cycle
Varpa_1571	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Varpa_1571	PWY-7254	TCA cycle VII (acetate-producers)
Varpa_1571	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Varpa_1572	PWY-3781	aerobic respiration I (cytochrome c)
Varpa_1572	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Varpa_1572	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Varpa_1572	PWY-5690	TCA cycle II (plants and fungi)
Varpa_1572	PWY-6728	methylaspartate cycle
Varpa_1572	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Varpa_1572	PWY-7254	TCA cycle VII (acetate-producers)
Varpa_1572	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Varpa_1576	PWY-1622	formaldehyde assimilation I (serine pathway)
Varpa_1576	PWY-5392	reductive TCA cycle II
Varpa_1576	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Varpa_1576	PWY-5690	TCA cycle II (plants and fungi)
Varpa_1576	PWY-5913	TCA cycle VI (obligate autotrophs)
Varpa_1576	PWY-6728	methylaspartate cycle
Varpa_1576	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Varpa_1576	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Varpa_1576	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Varpa_1580	PWY-5747	2-methylcitrate cycle II
Varpa_1603	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Varpa_1603	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Varpa_1604	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Varpa_1604	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Varpa_1606	PWY-4981	L-proline biosynthesis II (from arginine)
Varpa_1606	PWY-4984	urea cycle
Varpa_1606	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Varpa_1621	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Varpa_1621	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Varpa_1621	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Varpa_1624	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Varpa_1624	PWY-6148	tetrahydromethanopterin biosynthesis
Varpa_1624	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Varpa_1624	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Varpa_1631	PWY-6829	tRNA methylation (yeast)
Varpa_1631	PWY-7285	methylwyosine biosynthesis
Varpa_1631	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Varpa_1637	PWY-7158	L-phenylalanine degradation V
Varpa_1641	PWY-5667	CDP-diacylglycerol biosynthesis I
Varpa_1641	PWY-5981	CDP-diacylglycerol biosynthesis III
Varpa_1642	PWY-1361	benzoyl-CoA degradation I (aerobic)
Varpa_1642	PWY-5109	2-methylbutanoate biosynthesis
Varpa_1642	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Varpa_1642	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Varpa_1642	PWY-5177	glutaryl-CoA degradation
Varpa_1642	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Varpa_1642	PWY-6435	4-hydroxybenzoate biosynthesis V
Varpa_1642	PWY-6583	pyruvate fermentation to butanol I
Varpa_1642	PWY-6863	pyruvate fermentation to hexanol
Varpa_1642	PWY-6883	pyruvate fermentation to butanol II
Varpa_1642	PWY-6944	androstenedione degradation
Varpa_1642	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Varpa_1642	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Varpa_1642	PWY-7007	methyl ketone biosynthesis
Varpa_1642	PWY-7046	4-coumarate degradation (anaerobic)
Varpa_1642	PWY-7094	fatty acid salvage
Varpa_1642	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Varpa_1642	PWY-735	jasmonic acid biosynthesis
Varpa_1642	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Varpa_1654	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Varpa_1654	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Varpa_1680	PWY-702	L-methionine biosynthesis II
Varpa_1694	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Varpa_1694	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Varpa_1710	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Varpa_1710	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Varpa_1726	PWY-6891	thiazole biosynthesis II (Bacillus)
Varpa_1726	PWY-6892	thiazole biosynthesis I (E. coli)
Varpa_1726	PWY-7560	methylerythritol phosphate pathway II
Varpa_1732	PWY-6832	2-aminoethylphosphonate degradation II
Varpa_1741	PWY-5642	2,4-dinitrotoluene degradation
Varpa_1741	PWY-6373	acrylate degradation
Varpa_1777	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Varpa_1777	PWY-7205	CMP phosphorylation
Varpa_1779	PWY-3461	L-tyrosine biosynthesis II
Varpa_1779	PWY-3462	L-phenylalanine biosynthesis II
Varpa_1779	PWY-6120	L-tyrosine biosynthesis III
Varpa_1779	PWY-6627	salinosporamide A biosynthesis
Varpa_1779	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Varpa_1784	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
Varpa_1784	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
Varpa_1784	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
Varpa_1784	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
Varpa_1784	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
Varpa_1784	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
Varpa_1784	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
Varpa_1784	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
Varpa_1784	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Varpa_1784	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
Varpa_1785	PWY-181	photorespiration
Varpa_1789	PWY-4041	&gamma;-glutamyl cycle
Varpa_1789	PWY-5826	hypoglycin biosynthesis
Varpa_1796	PWY-381	nitrate reduction II (assimilatory)
Varpa_1796	PWY-5675	nitrate reduction V (assimilatory)
Varpa_1796	PWY-6549	L-glutamine biosynthesis III
Varpa_1796	PWY-6963	ammonia assimilation cycle I
Varpa_1796	PWY-6964	ammonia assimilation cycle II
Varpa_1813	PWY-3841	folate transformations II
Varpa_1813	PWY-6614	tetrahydrofolate biosynthesis
Varpa_1814	PWY-3841	folate transformations II
Varpa_1814	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Varpa_1814	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Varpa_1814	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Varpa_1814	PWY-7199	pyrimidine deoxyribonucleosides salvage
Varpa_1814	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Varpa_1815	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
Varpa_1815	PWY-581	indole-3-acetate biosynthesis II
Varpa_1815	PWY-7308	acrylonitrile degradation I
Varpa_1816	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
Varpa_1816	PWY-581	indole-3-acetate biosynthesis II
Varpa_1816	PWY-7308	acrylonitrile degradation I
Varpa_1817	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
Varpa_1817	PWY-581	indole-3-acetate biosynthesis II
Varpa_1817	PWY-7308	acrylonitrile degradation I
Varpa_1818	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Varpa_1818	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Varpa_1826	PWY-5344	L-homocysteine biosynthesis
Varpa_1826	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Varpa_1864	PWY-4202	arsenate detoxification I (glutaredoxin)
Varpa_1864	PWY-4621	arsenate detoxification II (glutaredoxin)
Varpa_1872	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Varpa_1874	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Varpa_1874	PWY-3162	L-tryptophan degradation V (side chain pathway)
Varpa_1874	PWY-5057	L-valine degradation II
Varpa_1874	PWY-5076	L-leucine degradation III
Varpa_1874	PWY-5078	L-isoleucine degradation II
Varpa_1874	PWY-5079	L-phenylalanine degradation III
Varpa_1874	PWY-5082	L-methionine degradation III
Varpa_1874	PWY-5480	pyruvate fermentation to ethanol I
Varpa_1874	PWY-5486	pyruvate fermentation to ethanol II
Varpa_1874	PWY-5751	phenylethanol biosynthesis
Varpa_1874	PWY-6028	acetoin degradation
Varpa_1874	PWY-6313	serotonin degradation
Varpa_1874	PWY-6333	acetaldehyde biosynthesis I
Varpa_1874	PWY-6342	noradrenaline and adrenaline degradation
Varpa_1874	PWY-6587	pyruvate fermentation to ethanol III
Varpa_1874	PWY-6802	salidroside biosynthesis
Varpa_1874	PWY-6871	3-methylbutanol biosynthesis
Varpa_1874	PWY-7013	L-1,2-propanediol degradation
Varpa_1874	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Varpa_1874	PWY-7118	chitin degradation to ethanol
Varpa_1874	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Varpa_1874	PWY-7557	dehydrodiconiferyl alcohol degradation
Varpa_1878	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Varpa_1878	PWY-6416	quinate degradation II
Varpa_1878	PWY-6707	gallate biosynthesis
Varpa_1887	PWY-5669	phosphatidylethanolamine biosynthesis I
Varpa_1892	PWY-6497	D-galactarate degradation II
Varpa_1900	PWY-6497	D-galactarate degradation II
Varpa_1900	PWY-6499	D-glucarate degradation II
Varpa_1903	PWY-6499	D-glucarate degradation II
Varpa_1916	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Varpa_1916	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Varpa_1916	PWY-6936	seleno-amino acid biosynthesis
Varpa_1916	PWY-702	L-methionine biosynthesis II
Varpa_1925	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Varpa_1929	PWY-6871	3-methylbutanol biosynthesis
Varpa_1945	PWY-5381	pyridine nucleotide cycling (plants)
Varpa_1957	PWY-4041	&gamma;-glutamyl cycle
Varpa_1957	PWY-5826	hypoglycin biosynthesis
Varpa_1959	PWY-5269	cardiolipin biosynthesis II
Varpa_1959	PWY-5668	cardiolipin biosynthesis I
Varpa_2048	PWY-5381	pyridine nucleotide cycling (plants)
Varpa_2048	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Varpa_2048	PWY-6596	adenosine nucleotides degradation I
Varpa_2048	PWY-6606	guanosine nucleotides degradation II
Varpa_2048	PWY-6607	guanosine nucleotides degradation I
Varpa_2048	PWY-6608	guanosine nucleotides degradation III
Varpa_2048	PWY-7185	UTP and CTP dephosphorylation I
Varpa_2077	PWY-5484	glycolysis II (from fructose 6-phosphate)
Varpa_2096	PWY-6823	molybdenum cofactor biosynthesis
Varpa_2098	PWY-2941	L-lysine biosynthesis II
Varpa_2098	PWY-2942	L-lysine biosynthesis III
Varpa_2098	PWY-5097	L-lysine biosynthesis VI
Varpa_2099	PWY-6823	molybdenum cofactor biosynthesis
Varpa_2167	PWY-1042	glycolysis IV (plant cytosol)
Varpa_2167	PWY-1622	formaldehyde assimilation I (serine pathway)
Varpa_2167	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Varpa_2167	PWY-5484	glycolysis II (from fructose 6-phosphate)
Varpa_2167	PWY-5723	Rubisco shunt
Varpa_2167	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Varpa_2167	PWY-6886	1-butanol autotrophic biosynthesis
Varpa_2167	PWY-6901	superpathway of glucose and xylose degradation
Varpa_2167	PWY-7003	glycerol degradation to butanol
Varpa_2167	PWY-7124	ethylene biosynthesis V (engineered)
Varpa_2167	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Varpa_2170	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Varpa_2170	PWY-7177	UTP and CTP dephosphorylation II
Varpa_2170	PWY-7185	UTP and CTP dephosphorylation I
Varpa_2173	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Varpa_2173	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Varpa_2173	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Varpa_2173	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Varpa_2181	PWY-2941	L-lysine biosynthesis II
Varpa_2181	PWY-2942	L-lysine biosynthesis III
Varpa_2181	PWY-5097	L-lysine biosynthesis VI
Varpa_2203	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
Varpa_2203	PWY-7494	choline degradation IV
Varpa_2204	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Varpa_2221	PWY-4261	glycerol degradation I
Varpa_2223	PWY-4261	glycerol degradation I
Varpa_2223	PWY-6118	glycerol-3-phosphate shuttle
Varpa_2223	PWY-6952	glycerophosphodiester degradation
Varpa_2231	PWY-4381	fatty acid biosynthesis initiation I
Varpa_2249	PWY-723	alkylnitronates degradation
Varpa_2266	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Varpa_2293	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Varpa_2294	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Varpa_2324	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Varpa_2324	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Varpa_2326	PWY-723	alkylnitronates degradation
Varpa_2387	PWY-5642	2,4-dinitrotoluene degradation
Varpa_2387	PWY-6373	acrylate degradation
Varpa_2394	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Varpa_2397	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Varpa_2397	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Varpa_2397	PWY-6936	seleno-amino acid biosynthesis
Varpa_2397	PWY-702	L-methionine biosynthesis II
Varpa_2467	PWY-6683	sulfate reduction III (assimilatory)
Varpa_2500	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Varpa_2514	PWY-5386	methylglyoxal degradation I
Varpa_2517	PWY-6823	molybdenum cofactor biosynthesis
Varpa_2518	PWY-5964	guanylyl molybdenum cofactor biosynthesis
Varpa_2519	PWY-6823	molybdenum cofactor biosynthesis
Varpa_2522	PWY-6854	ethylene biosynthesis III (microbes)
Varpa_2529	PWY-4381	fatty acid biosynthesis initiation I
Varpa_2546	PWY-7039	phosphatidate metabolism, as a signaling molecule
Varpa_2551	PWY-5101	L-isoleucine biosynthesis II
Varpa_2551	PWY-5103	L-isoleucine biosynthesis III
Varpa_2551	PWY-5104	L-isoleucine biosynthesis IV
Varpa_2551	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Varpa_2551	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Varpa_2551	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Varpa_2551	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Varpa_2552	PWY-5101	L-isoleucine biosynthesis II
Varpa_2552	PWY-5103	L-isoleucine biosynthesis III
Varpa_2552	PWY-5104	L-isoleucine biosynthesis IV
Varpa_2552	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Varpa_2552	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Varpa_2552	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Varpa_2552	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Varpa_2554	PWY-5101	L-isoleucine biosynthesis II
Varpa_2554	PWY-5103	L-isoleucine biosynthesis III
Varpa_2554	PWY-5104	L-isoleucine biosynthesis IV
Varpa_2554	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Varpa_2555	PWY-5669	phosphatidylethanolamine biosynthesis I
Varpa_2556	PWY-6871	3-methylbutanol biosynthesis
Varpa_2557	PWY-6871	3-methylbutanol biosynthesis
Varpa_2566	PWY-6215	4-chlorobenzoate degradation
Varpa_2575	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Varpa_2602	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Varpa_2602	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Varpa_2602	PWY-6897	thiamin salvage II
Varpa_2602	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Varpa_2602	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Varpa_2602	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Varpa_2602	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Varpa_2603	PWY-6891	thiazole biosynthesis II (Bacillus)
Varpa_2603	PWY-6892	thiazole biosynthesis I (E. coli)
Varpa_2606	PWY-6910	hydroxymethylpyrimidine salvage
Varpa_2606	PWY-7356	thiamin salvage IV (yeast)
Varpa_2606	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Varpa_2611	PWY-101	photosynthesis light reactions
Varpa_2611	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Varpa_2613	PWY-5278	sulfite oxidation III
Varpa_2613	PWY-5340	sulfate activation for sulfonation
Varpa_2613	PWY-6683	sulfate reduction III (assimilatory)
Varpa_2613	PWY-6932	selenate reduction
Varpa_2614	PWY-5278	sulfite oxidation III
Varpa_2614	PWY-5340	sulfate activation for sulfonation
Varpa_2614	PWY-6683	sulfate reduction III (assimilatory)
Varpa_2614	PWY-6932	selenate reduction
Varpa_2617	PWY-6683	sulfate reduction III (assimilatory)
Varpa_2620	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Varpa_2636	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Varpa_2645	PWY-1042	glycolysis IV (plant cytosol)
Varpa_2645	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Varpa_2645	PWY-5484	glycolysis II (from fructose 6-phosphate)
Varpa_2645	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Varpa_2645	PWY-7385	1,3-propanediol biosynthesis (engineered)
Varpa_2652	PWY-4261	glycerol degradation I
Varpa_2675	PWY-5344	L-homocysteine biosynthesis
Varpa_2675	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Varpa_2685	PWY-6823	molybdenum cofactor biosynthesis
Varpa_2685	PWY-6891	thiazole biosynthesis II (Bacillus)
Varpa_2685	PWY-6892	thiazole biosynthesis I (E. coli)
Varpa_2685	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Varpa_2689	PWY-6654	phosphopantothenate biosynthesis III
Varpa_2706	PWY-5839	menaquinol-7 biosynthesis
Varpa_2706	PWY-5844	menaquinol-9 biosynthesis
Varpa_2706	PWY-5849	menaquinol-6 biosynthesis
Varpa_2706	PWY-5890	menaquinol-10 biosynthesis
Varpa_2706	PWY-5891	menaquinol-11 biosynthesis
Varpa_2706	PWY-5892	menaquinol-12 biosynthesis
Varpa_2706	PWY-5895	menaquinol-13 biosynthesis
Varpa_2708	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Varpa_2708	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Varpa_2708	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Varpa_2709	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Varpa_2709	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Varpa_2710	PWY-5381	pyridine nucleotide cycling (plants)
Varpa_2710	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Varpa_2818	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Varpa_2826	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Varpa_2829	PWY-5988	wound-induced proteolysis I
Varpa_2829	PWY-6018	seed germination protein turnover
Varpa_2841	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Varpa_2841	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Varpa_2841	PWY-5989	stearate biosynthesis II (bacteria and plants)
Varpa_2841	PWY-6113	superpathway of mycolate biosynthesis
Varpa_2841	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Varpa_2841	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Varpa_2841	PWY-7096	triclosan resistance
Varpa_2841	PWYG-321	mycolate biosynthesis
Varpa_2863	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Varpa_2863	PWY-6596	adenosine nucleotides degradation I
Varpa_2863	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Varpa_2866	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Varpa_2869	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
Varpa_2869	PWY-5739	GDP-D-perosamine biosynthesis
Varpa_2869	PWY-5740	GDP-L-colitose biosynthesis
Varpa_2869	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Varpa_2870	PWY-5659	GDP-mannose biosynthesis
Varpa_2870	PWY-6073	alginate biosynthesis I (algal)
Varpa_2870	PWY-6082	alginate biosynthesis II (bacterial)
Varpa_2870	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Varpa_2874	PWY-3821	galactose degradation III
Varpa_2874	PWY-6317	galactose degradation I (Leloir pathway)
Varpa_2874	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Varpa_2874	PWY-6527	stachyose degradation
Varpa_2874	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Varpa_2874	PWY-7344	UDP-D-galactose biosynthesis
Varpa_2881	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Varpa_2935	PWY-3461	L-tyrosine biosynthesis II
Varpa_2935	PWY-3462	L-phenylalanine biosynthesis II
Varpa_2935	PWY-6120	L-tyrosine biosynthesis III
Varpa_2935	PWY-6406	salicylate biosynthesis I
Varpa_2935	PWY-6627	salinosporamide A biosynthesis
Varpa_2967	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Varpa_2967	PWY-6578	8-amino-7-oxononanoate biosynthesis III
Varpa_2967	PWY-7147	8-amino-7-oxononanoate biosynthesis II
Varpa_2968	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Varpa_2982	PWY-5350	thiosulfate disproportionation III (rhodanese)
Varpa_2988	PWY-5392	reductive TCA cycle II
Varpa_2988	PWY-5537	pyruvate fermentation to acetate V
Varpa_2988	PWY-5538	pyruvate fermentation to acetate VI
Varpa_2988	PWY-5690	TCA cycle II (plants and fungi)
Varpa_2988	PWY-5913	TCA cycle VI (obligate autotrophs)
Varpa_2988	PWY-6728	methylaspartate cycle
Varpa_2988	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Varpa_2988	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Varpa_2990	PWY-621	sucrose degradation III (sucrose invertase)
Varpa_3003	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Varpa_3003	PWY-622	starch biosynthesis
Varpa_3005	PWY-2622	trehalose biosynthesis IV
Varpa_3008	PWY-2661	trehalose biosynthesis V
Varpa_3009	PWY-2661	trehalose biosynthesis V
Varpa_3009	PWY-5941	glycogen degradation II (eukaryotic)
Varpa_3009	PWY-6724	starch degradation II
Varpa_3009	PWY-6737	starch degradation V
Varpa_3009	PWY-7238	sucrose biosynthesis II
Varpa_3010	PWY-3781	aerobic respiration I (cytochrome c)
Varpa_3010	PWY-4521	arsenite oxidation I (respiratory)
Varpa_3010	PWY-6692	Fe(II) oxidation
Varpa_3010	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Varpa_3022	PWY-5506	methanol oxidation to formaldehyde IV
Varpa_3043	PWY-3821	galactose degradation III
Varpa_3043	PWY-6317	galactose degradation I (Leloir pathway)
Varpa_3043	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Varpa_3043	PWY-6527	stachyose degradation
Varpa_3043	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Varpa_3043	PWY-7344	UDP-D-galactose biosynthesis
Varpa_3050	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
Varpa_3053	PWY-2301	<i>myo</i>-inositol biosynthesis
Varpa_3053	PWY-4661	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis III (<i>Spirodela polyrrhiza</i>)
Varpa_3053	PWY-6372	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis IV (<i>Dictyostelium</i>)
Varpa_3053	PWY-6580	phosphatidylinositol biosynthesis I (bacteria)
Varpa_3053	PWY-6664	di-myo-inositol phosphate biosynthesis
Varpa_3103	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Varpa_3103	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Varpa_3103	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Varpa_3103	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Varpa_3103	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Varpa_3103	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Varpa_3111	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Varpa_3146	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Varpa_3146	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Varpa_3158	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Varpa_3158	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Varpa_3160	PWY-6832	2-aminoethylphosphonate degradation II
Varpa_3186	PWY-1361	benzoyl-CoA degradation I (aerobic)
Varpa_3186	PWY-5109	2-methylbutanoate biosynthesis
Varpa_3186	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Varpa_3186	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Varpa_3186	PWY-5177	glutaryl-CoA degradation
Varpa_3186	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Varpa_3186	PWY-6435	4-hydroxybenzoate biosynthesis V
Varpa_3186	PWY-6583	pyruvate fermentation to butanol I
Varpa_3186	PWY-6863	pyruvate fermentation to hexanol
Varpa_3186	PWY-6883	pyruvate fermentation to butanol II
Varpa_3186	PWY-6944	androstenedione degradation
Varpa_3186	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Varpa_3186	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Varpa_3186	PWY-7007	methyl ketone biosynthesis
Varpa_3186	PWY-7046	4-coumarate degradation (anaerobic)
Varpa_3186	PWY-7094	fatty acid salvage
Varpa_3186	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Varpa_3186	PWY-735	jasmonic acid biosynthesis
Varpa_3186	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Varpa_3201	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Varpa_3201	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Varpa_3201	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Varpa_3208	PWY-1001	cellulose biosynthesis
Varpa_3210	PWY-6788	cellulose degradation II (fungi)
Varpa_3215	PWY-2723	trehalose degradation V
Varpa_3215	PWY-3801	sucrose degradation II (sucrose synthase)
Varpa_3215	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Varpa_3215	PWY-5661	GDP-glucose biosynthesis
Varpa_3215	PWY-5661-1	Varpa_3215
Varpa_3215	PWY-5940	streptomycin biosynthesis
Varpa_3215	PWY-5941	glycogen degradation II (eukaryotic)
Varpa_3215	PWY-622	starch biosynthesis
Varpa_3215	PWY-6731	starch degradation III
Varpa_3215	PWY-6737	starch degradation V
Varpa_3215	PWY-6749	CMP-legionaminate biosynthesis I
Varpa_3215	PWY-7238	sucrose biosynthesis II
Varpa_3215	PWY-7343	UDP-glucose biosynthesis
Varpa_3237	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Varpa_3237	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Varpa_3237	PWY-5989	stearate biosynthesis II (bacteria and plants)
Varpa_3237	PWY-5994	palmitate biosynthesis I (animals and fungi)
Varpa_3237	PWY-6113	superpathway of mycolate biosynthesis
Varpa_3237	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Varpa_3237	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Varpa_3237	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Varpa_3237	PWYG-321	mycolate biosynthesis
Varpa_3245	PWY-6168	flavin biosynthesis III (fungi)
Varpa_3245	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Varpa_3247	PWY-7183	pyrimidine nucleobases salvage I
Varpa_3256	PWY-5340	sulfate activation for sulfonation
Varpa_3258	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Varpa_3278	PWY-5913	TCA cycle VI (obligate autotrophs)
Varpa_3278	PWY-6549	L-glutamine biosynthesis III
Varpa_3278	PWY-6728	methylaspartate cycle
Varpa_3278	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Varpa_3278	PWY-7124	ethylene biosynthesis V (engineered)
Varpa_3278	PWY-7254	TCA cycle VII (acetate-producers)
Varpa_3278	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Varpa_3282	PWY-6854	ethylene biosynthesis III (microbes)
Varpa_3288	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Varpa_3288	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Varpa_3289	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Varpa_3295	PWY-1361	benzoyl-CoA degradation I (aerobic)
Varpa_3295	PWY-5109	2-methylbutanoate biosynthesis
Varpa_3295	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Varpa_3295	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Varpa_3295	PWY-5177	glutaryl-CoA degradation
Varpa_3295	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Varpa_3295	PWY-6435	4-hydroxybenzoate biosynthesis V
Varpa_3295	PWY-6583	pyruvate fermentation to butanol I
Varpa_3295	PWY-6863	pyruvate fermentation to hexanol
Varpa_3295	PWY-6883	pyruvate fermentation to butanol II
Varpa_3295	PWY-6944	androstenedione degradation
Varpa_3295	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Varpa_3295	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Varpa_3295	PWY-7007	methyl ketone biosynthesis
Varpa_3295	PWY-7046	4-coumarate degradation (anaerobic)
Varpa_3295	PWY-7094	fatty acid salvage
Varpa_3295	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Varpa_3295	PWY-735	jasmonic acid biosynthesis
Varpa_3295	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Varpa_3301	PWY-6749	CMP-legionaminate biosynthesis I
Varpa_3302	PWY-6614	tetrahydrofolate biosynthesis
Varpa_3310	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Varpa_3310	PWY-5686	UMP biosynthesis
Varpa_3310	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Varpa_3311	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Varpa_3311	PWY-5686	UMP biosynthesis
Varpa_3311	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Varpa_3316	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Varpa_3316	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Varpa_3316	PWY-5989	stearate biosynthesis II (bacteria and plants)
Varpa_3316	PWY-5994	palmitate biosynthesis I (animals and fungi)
Varpa_3316	PWY-6113	superpathway of mycolate biosynthesis
Varpa_3316	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Varpa_3316	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Varpa_3316	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Varpa_3316	PWYG-321	mycolate biosynthesis
Varpa_3321	PWY-7560	methylerythritol phosphate pathway II
Varpa_3328	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Varpa_3331	PWY-6938	NADH repair
Varpa_3342	PWY-7560	methylerythritol phosphate pathway II
Varpa_3343	PWY-7560	methylerythritol phosphate pathway II
Varpa_3355	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Varpa_3355	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Varpa_3355	PWY-6269	adenosylcobalamin salvage from cobinamide II
Varpa_3356	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Varpa_3356	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Varpa_3356	PWY-6269	adenosylcobalamin salvage from cobinamide II
Varpa_3372	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Varpa_3372	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Varpa_3373	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Varpa_3373	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Varpa_3373	PWY-6268	adenosylcobalamin salvage from cobalamin
Varpa_3373	PWY-6269	adenosylcobalamin salvage from cobinamide II
Varpa_3377	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Varpa_3377	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Varpa_3377	PWY-6269	adenosylcobalamin salvage from cobinamide II
Varpa_3401	PWY-5101	L-isoleucine biosynthesis II
Varpa_3401	PWY-5103	L-isoleucine biosynthesis III
Varpa_3401	PWY-5104	L-isoleucine biosynthesis IV
Varpa_3401	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Varpa_3406	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Varpa_3406	PWY-7118	chitin degradation to ethanol
Varpa_3410	PWY-5392	reductive TCA cycle II
Varpa_3410	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Varpa_3410	PWY-5690	TCA cycle II (plants and fungi)
Varpa_3410	PWY-5913	TCA cycle VI (obligate autotrophs)
Varpa_3410	PWY-6728	methylaspartate cycle
Varpa_3410	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Varpa_3410	PWY-7254	TCA cycle VII (acetate-producers)
Varpa_3410	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Varpa_3414	PWY-5392	reductive TCA cycle II
Varpa_3414	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Varpa_3414	PWY-5690	TCA cycle II (plants and fungi)
Varpa_3414	PWY-5913	TCA cycle VI (obligate autotrophs)
Varpa_3414	PWY-6728	methylaspartate cycle
Varpa_3414	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Varpa_3414	PWY-7254	TCA cycle VII (acetate-producers)
Varpa_3414	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Varpa_3415	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Varpa_3415	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Varpa_3472	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Varpa_3495	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Varpa_3497	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Varpa_3497	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Varpa_3501	PWY-2941	L-lysine biosynthesis II
Varpa_3501	PWY-2942	L-lysine biosynthesis III
Varpa_3501	PWY-5097	L-lysine biosynthesis VI
Varpa_3501	PWY-6559	spermidine biosynthesis II
Varpa_3501	PWY-6562	norspermidine biosynthesis
Varpa_3501	PWY-7153	grixazone biosynthesis
Varpa_3503	PWY-4381	fatty acid biosynthesis initiation I
Varpa_3503	PWY-5743	3-hydroxypropanoate cycle
Varpa_3503	PWY-5744	glyoxylate assimilation
Varpa_3503	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Varpa_3503	PWY-6679	jadomycin biosynthesis
Varpa_3503	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Varpa_3514	PWY-1622	formaldehyde assimilation I (serine pathway)
Varpa_3514	PWY-181	photorespiration
Varpa_3514	PWY-2161	folate polyglutamylation
Varpa_3514	PWY-2201	folate transformations I
Varpa_3514	PWY-3661	glycine betaine degradation I
Varpa_3514	PWY-3661-1	glycine betaine degradation II (mammalian)
Varpa_3514	PWY-3841	folate transformations II
Varpa_3514	PWY-5497	purine nucleobases degradation II (anaerobic)
Varpa_3523	PWY-6167	flavin biosynthesis II (archaea)
Varpa_3523	PWY-6168	flavin biosynthesis III (fungi)
Varpa_3523	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Varpa_3524	PWY-6167	flavin biosynthesis II (archaea)
Varpa_3524	PWY-6168	flavin biosynthesis III (fungi)
Varpa_3524	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Varpa_3525	PWY-6167	flavin biosynthesis II (archaea)
Varpa_3525	PWY-6168	flavin biosynthesis III (fungi)
Varpa_3576	PWY-5874	heme degradation
Varpa_3576	PWY-5915	phycoerythrobilin biosynthesis I
Varpa_3576	PWY-5917	phycocyanobilin biosynthesis
Varpa_3576	PWY-7170	phytochromobilin biosynthesis
Varpa_3598	PWY-6654	phosphopantothenate biosynthesis III
Varpa_3601	PWY-5532	adenosine nucleotides degradation IV
Varpa_3601	PWY-5723	Rubisco shunt
Varpa_3603	PWY-5723	Rubisco shunt
Varpa_3611	PWY-1881	formate oxidation to CO<sub>2</sub>
Varpa_3611	PWY-5497	purine nucleobases degradation II (anaerobic)
Varpa_3611	PWY-6696	oxalate degradation III
Varpa_3623	PWY-6823	molybdenum cofactor biosynthesis
Varpa_3624	PWY-6823	molybdenum cofactor biosynthesis
Varpa_3629	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Varpa_3650	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Varpa_3667	PWY-5451	acetone degradation I (to methylglyoxal)
Varpa_3667	PWY-6588	pyruvate fermentation to acetone
Varpa_3667	PWY-6876	isopropanol biosynthesis
Varpa_3667	PWY-7466	acetone degradation III (to propane-1,2-diol)
Varpa_3692	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Varpa_3703	PWY-7560	methylerythritol phosphate pathway II
Varpa_3707	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Varpa_3707	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Varpa_3707	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Varpa_3707	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Varpa_3707	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Varpa_3707	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Varpa_3707	PWY-7205	CMP phosphorylation
Varpa_3707	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Varpa_3707	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Varpa_3707	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Varpa_3707	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Varpa_3707	PWY-7224	purine deoxyribonucleosides salvage
Varpa_3707	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Varpa_3707	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Varpa_3717	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Varpa_3717	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Varpa_3718	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Varpa_3719	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Varpa_3720	PWY-3941	&beta;-alanine biosynthesis II
Varpa_3720	PWY-5104	L-isoleucine biosynthesis IV
Varpa_3720	PWY-5747	2-methylcitrate cycle II
Varpa_3727	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Varpa_3727	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Varpa_3730	PWY-6891	thiazole biosynthesis II (Bacillus)
Varpa_3730	PWY-6892	thiazole biosynthesis I (E. coli)
Varpa_3730	PWY-7560	methylerythritol phosphate pathway II
Varpa_3733	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Varpa_3733	PWY-2201	folate transformations I
Varpa_3733	PWY-3841	folate transformations II
Varpa_3733	PWY-5030	L-histidine degradation III
Varpa_3733	PWY-5497	purine nucleobases degradation II (anaerobic)
Varpa_3733	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Varpa_3736	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Varpa_3736	PWY-5723	Rubisco shunt
Varpa_3737	PWY-5686	UMP biosynthesis
Varpa_3749	PWY-6823	molybdenum cofactor biosynthesis
Varpa_3749	PWY-6891	thiazole biosynthesis II (Bacillus)
Varpa_3749	PWY-6892	thiazole biosynthesis I (E. coli)
Varpa_3749	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Varpa_3752	PWY-5913	TCA cycle VI (obligate autotrophs)
Varpa_3752	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Varpa_3752	PWY-6638	sulfolactate degradation III
Varpa_3752	PWY-6642	(<i>R</i>)-cysteate degradation
Varpa_3752	PWY-6643	coenzyme M biosynthesis II
Varpa_3752	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Varpa_3752	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Varpa_3752	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Varpa_3759	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Varpa_3761	PWY-4381	fatty acid biosynthesis initiation I
Varpa_3761	PWY-5743	3-hydroxypropanoate cycle
Varpa_3761	PWY-5744	glyoxylate assimilation
Varpa_3761	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Varpa_3761	PWY-6679	jadomycin biosynthesis
Varpa_3761	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Varpa_3765	PWY-5743	3-hydroxypropanoate cycle
Varpa_3765	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Varpa_3765	PWY-6728	methylaspartate cycle
Varpa_3765	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Varpa_3779	PWY-5101	L-isoleucine biosynthesis II
Varpa_3779	PWY-5103	L-isoleucine biosynthesis III
Varpa_3779	PWY-5104	L-isoleucine biosynthesis IV
Varpa_3779	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Varpa_3779	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Varpa_3779	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Varpa_3779	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Varpa_3843	PWY-6424	Varpa_3843
Varpa_3856	PWY-5676	acetyl-CoA fermentation to butanoate II
Varpa_3856	PWY-5741	ethylmalonyl-CoA pathway
Varpa_3856	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Varpa_3886	PWY-5532	adenosine nucleotides degradation IV
Varpa_3886	PWY-5723	Rubisco shunt
Varpa_3891	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Varpa_3891	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Varpa_3904	PWY-5392	reductive TCA cycle II
Varpa_3904	PWY-5537	pyruvate fermentation to acetate V
Varpa_3904	PWY-5538	pyruvate fermentation to acetate VI
Varpa_3904	PWY-5690	TCA cycle II (plants and fungi)
Varpa_3904	PWY-5913	TCA cycle VI (obligate autotrophs)
Varpa_3904	PWY-6728	methylaspartate cycle
Varpa_3904	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Varpa_3904	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Varpa_3949	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Varpa_3966	PWY-6167	flavin biosynthesis II (archaea)
Varpa_3966	PWY-6168	flavin biosynthesis III (fungi)
Varpa_3968	PWY-4202	arsenate detoxification I (glutaredoxin)
Varpa_3968	PWY-4621	arsenate detoxification II (glutaredoxin)
Varpa_3982	PWY-2781	<i>cis</i>-zeatin biosynthesis
Varpa_4013	PWY-3781	aerobic respiration I (cytochrome c)
Varpa_4013	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Varpa_4013	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Varpa_4013	PWY-6692	Fe(II) oxidation
Varpa_4027	PWY-1042	glycolysis IV (plant cytosol)
Varpa_4027	PWY-5484	glycolysis II (from fructose 6-phosphate)
Varpa_4027	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Varpa_4027	PWY-7003	glycerol degradation to butanol
Varpa_4043	PWY-6683	sulfate reduction III (assimilatory)
Varpa_4048	PWY-5194	siroheme biosynthesis
Varpa_4048	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Varpa_4100	PWY-6936	seleno-amino acid biosynthesis
Varpa_4100	PWY-7274	D-cycloserine biosynthesis
Varpa_4102	PWY-2301	<i>myo</i>-inositol biosynthesis
Varpa_4102	PWY-4702	phytate degradation I
Varpa_4102	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
Varpa_4160	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Varpa_4191	PWY-6840	homoglutathione biosynthesis
Varpa_4191	PWY-7255	ergothioneine biosynthesis I (bacteria)
Varpa_4250	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Varpa_4263	PWY-5101	L-isoleucine biosynthesis II
Varpa_4263	PWY-5103	L-isoleucine biosynthesis III
Varpa_4263	PWY-5104	L-isoleucine biosynthesis IV
Varpa_4263	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Varpa_4264	PWY-7130	L-glucose degradation
Varpa_4265	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Varpa_4265	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Varpa_4265	PWY-7242	D-fructuronate degradation
Varpa_4265	PWY-7310	D-glucosaminate degradation
Varpa_4279	PWY-5386	methylglyoxal degradation I
Varpa_4281	PWY-7425	2-chloroacrylate degradation I
Varpa_4282	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Varpa_4282	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Varpa_4282	PWY-7242	D-fructuronate degradation
Varpa_4282	PWY-7310	D-glucosaminate degradation
Varpa_4283	PWY-5101	L-isoleucine biosynthesis II
Varpa_4283	PWY-5103	L-isoleucine biosynthesis III
Varpa_4283	PWY-5104	L-isoleucine biosynthesis IV
Varpa_4283	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Varpa_4287	PWY-6854	ethylene biosynthesis III (microbes)
Varpa_4289	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Varpa_4289	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Varpa_4301	PWY-6749	CMP-legionaminate biosynthesis I
Varpa_4309	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Varpa_4310	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Varpa_4310	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Varpa_4332	PWY-6012	acyl carrier protein metabolism I
Varpa_4332	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Varpa_4340	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Varpa_4351	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Varpa_4353	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Varpa_4353	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Varpa_4353	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Varpa_4353	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Varpa_4356	PWY-2161	folate polyglutamylation
Varpa_4360	PWY-4983	L-citrulline-nitric oxide cycle
Varpa_4360	PWY-4984	urea cycle
Varpa_4360	PWY-5	canavanine biosynthesis
Varpa_4360	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Varpa_4360	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Varpa_4362	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Varpa_4362	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Varpa_4370	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Varpa_4370	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Varpa_4381	PWY-5484	glycolysis II (from fructose 6-phosphate)
Varpa_4387	PWY-1281	sulfoacetaldehyde degradation I
Varpa_4387	PWY-5482	pyruvate fermentation to acetate II
Varpa_4387	PWY-5485	pyruvate fermentation to acetate IV
Varpa_4387	PWY-5497	purine nucleobases degradation II (anaerobic)
Varpa_4387	PWY-6637	sulfolactate degradation II
Varpa_4402	PWY-5482	pyruvate fermentation to acetate II
Varpa_4402	PWY-5485	pyruvate fermentation to acetate IV
Varpa_4402	PWY-5497	purine nucleobases degradation II (anaerobic)
Varpa_4403	PWY-1281	sulfoacetaldehyde degradation I
Varpa_4403	PWY-6637	sulfolactate degradation II
Varpa_4405	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
Varpa_4406	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
Varpa_4420	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
Varpa_4420	PWY-7494	choline degradation IV
Varpa_4459	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Varpa_4463	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Varpa_4479	PWY-5331	taurine biosynthesis
Varpa_4480	PWY-5350	thiosulfate disproportionation III (rhodanese)
Varpa_4484	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Varpa_4485	PWY-5497	purine nucleobases degradation II (anaerobic)
Varpa_4485	PWY-6606	guanosine nucleotides degradation II
Varpa_4485	PWY-6608	guanosine nucleotides degradation III
Varpa_4485	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Varpa_4494	PWY-6610	adenine and adenosine salvage IV
Varpa_4513	PWY-5497	purine nucleobases degradation II (anaerobic)
Varpa_4513	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Varpa_4513	PWY-6538	caffeine degradation III (bacteria, via demethylation)
Varpa_4513	PWY-6596	adenosine nucleotides degradation I
Varpa_4513	PWY-6606	guanosine nucleotides degradation II
Varpa_4513	PWY-6607	guanosine nucleotides degradation I
Varpa_4513	PWY-6608	guanosine nucleotides degradation III
Varpa_4513	PWY-6999	theophylline degradation
Varpa_4514	PWY-5497	purine nucleobases degradation II (anaerobic)
Varpa_4514	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Varpa_4514	PWY-6538	caffeine degradation III (bacteria, via demethylation)
Varpa_4514	PWY-6596	adenosine nucleotides degradation I
Varpa_4514	PWY-6606	guanosine nucleotides degradation II
Varpa_4514	PWY-6607	guanosine nucleotides degradation I
Varpa_4514	PWY-6608	guanosine nucleotides degradation III
Varpa_4514	PWY-6999	theophylline degradation
Varpa_4518	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Varpa_4518	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Varpa_4518	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Varpa_4518	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Varpa_4538	PWY-5691	urate degradation to allantoin I
Varpa_4538	PWY-7394	urate degradation to allantoin II
Varpa_4541	PWY-5691	urate degradation to allantoin I
Varpa_4541	PWY-7394	urate degradation to allantoin II
Varpa_4560	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Varpa_4560	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Varpa_4575	PWY-1281	sulfoacetaldehyde degradation I
Varpa_4575	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Varpa_4575	PWY-5482	pyruvate fermentation to acetate II
Varpa_4575	PWY-5485	pyruvate fermentation to acetate IV
Varpa_4575	PWY-5497	purine nucleobases degradation II (anaerobic)
Varpa_4575	PWY-6637	sulfolactate degradation II
Varpa_4575	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Varpa_4611	PWY-6936	seleno-amino acid biosynthesis
Varpa_4619	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Varpa_4619	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Varpa_4681	PWY-3821	galactose degradation III
Varpa_4681	PWY-6317	galactose degradation I (Leloir pathway)
Varpa_4681	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Varpa_4681	PWY-6527	stachyose degradation
Varpa_4681	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Varpa_4681	PWY-7344	UDP-D-galactose biosynthesis
Varpa_4691	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Varpa_4693	PWY-7560	methylerythritol phosphate pathway II
Varpa_4712	PWY-3781	aerobic respiration I (cytochrome c)
Varpa_4712	PWY-4521	arsenite oxidation I (respiratory)
Varpa_4712	PWY-6692	Fe(II) oxidation
Varpa_4712	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Varpa_4712	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
Varpa_4726	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Varpa_4759	PWY-5316	nicotine biosynthesis
Varpa_4759	PWY-7342	superpathway of nicotine biosynthesis
Varpa_4760	PWY-6654	phosphopantothenate biosynthesis III
Varpa_4762	PWY-6703	preQ<sub>0</sub> biosynthesis
Varpa_4764	PWY-5316	nicotine biosynthesis
Varpa_4764	PWY-7342	superpathway of nicotine biosynthesis
Varpa_4765	PWY-5316	nicotine biosynthesis
Varpa_4765	PWY-5381	pyridine nucleotide cycling (plants)
Varpa_4765	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Varpa_4765	PWY-7342	superpathway of nicotine biosynthesis
Varpa_4766	PWY-5667	CDP-diacylglycerol biosynthesis I
Varpa_4766	PWY-5981	CDP-diacylglycerol biosynthesis III
Varpa_4770	PWY-1622	formaldehyde assimilation I (serine pathway)
Varpa_4770	PWY-5484	glycolysis II (from fructose 6-phosphate)
Varpa_4787	PWY-5663	tetrahydrobiopterin biosynthesis I
Varpa_4787	PWY-5664	tetrahydrobiopterin biosynthesis II
Varpa_4787	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Varpa_4787	PWY-6703	preQ<sub>0</sub> biosynthesis
Varpa_4787	PWY-6983	tetrahydrobiopterin biosynthesis III
Varpa_4787	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Varpa_4799	PWY-5839	menaquinol-7 biosynthesis
Varpa_4799	PWY-5844	menaquinol-9 biosynthesis
Varpa_4799	PWY-5849	menaquinol-6 biosynthesis
Varpa_4799	PWY-5890	menaquinol-10 biosynthesis
Varpa_4799	PWY-5891	menaquinol-11 biosynthesis
Varpa_4799	PWY-5892	menaquinol-12 biosynthesis
Varpa_4799	PWY-5895	menaquinol-13 biosynthesis
Varpa_4803	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Varpa_4803	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Varpa_4817	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Varpa_4843	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Varpa_4855	PWY-5704	urea degradation II
Varpa_4857	PWY-5704	urea degradation II
Varpa_4858	PWY-5704	urea degradation II
Varpa_4883	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Varpa_4892	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Varpa_4892	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Varpa_4892	PWY-6164	3-dehydroquinate biosynthesis I
Varpa_4898	PWY-4261	glycerol degradation I
Varpa_4898	PWY-5530	sorbitol biosynthesis II
Varpa_4921	PWY-6986	alginate degradation
Varpa_4952	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Varpa_4956	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Varpa_4961	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Varpa_4969	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Varpa_4969	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Varpa_4973	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Varpa_4989	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Varpa_4989	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Varpa_4989	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Varpa_4997	PWY-7560	methylerythritol phosphate pathway II
Varpa_5009	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Varpa_5053	PWY-3781	aerobic respiration I (cytochrome c)
Varpa_5053	PWY-4521	arsenite oxidation I (respiratory)
Varpa_5053	PWY-6692	Fe(II) oxidation
Varpa_5053	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Varpa_5090	PWY-3781	aerobic respiration I (cytochrome c)
Varpa_5090	PWY-4521	arsenite oxidation I (respiratory)
Varpa_5090	PWY-6692	Fe(II) oxidation
Varpa_5090	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Varpa_5139	PWY-1361	benzoyl-CoA degradation I (aerobic)
Varpa_5139	PWY-2361	3-oxoadipate degradation
Varpa_5139	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
Varpa_5166	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Varpa_5166	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Varpa_5183	PWY-1881	formate oxidation to CO<sub>2</sub>
Varpa_5183	PWY-5497	purine nucleobases degradation II (anaerobic)
Varpa_5183	PWY-6696	oxalate degradation III
Varpa_5191	PWY-1042	glycolysis IV (plant cytosol)
Varpa_5191	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Varpa_5191	PWY-5484	glycolysis II (from fructose 6-phosphate)
Varpa_5191	PWY-5723	Rubisco shunt
Varpa_5191	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Varpa_5191	PWY-6886	1-butanol autotrophic biosynthesis
Varpa_5191	PWY-6901	superpathway of glucose and xylose degradation
Varpa_5191	PWY-7003	glycerol degradation to butanol
Varpa_5191	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Varpa_5191	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Varpa_5193	PWY-6654	phosphopantothenate biosynthesis III
Varpa_5195	PWY-5392	reductive TCA cycle II
Varpa_5195	PWY-5537	pyruvate fermentation to acetate V
Varpa_5195	PWY-5538	pyruvate fermentation to acetate VI
Varpa_5195	PWY-5690	TCA cycle II (plants and fungi)
Varpa_5195	PWY-5913	TCA cycle VI (obligate autotrophs)
Varpa_5195	PWY-6728	methylaspartate cycle
Varpa_5195	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Varpa_5195	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Varpa_5196	PWY-5392	reductive TCA cycle II
Varpa_5196	PWY-5537	pyruvate fermentation to acetate V
Varpa_5196	PWY-5538	pyruvate fermentation to acetate VI
Varpa_5196	PWY-5690	TCA cycle II (plants and fungi)
Varpa_5196	PWY-5913	TCA cycle VI (obligate autotrophs)
Varpa_5196	PWY-6728	methylaspartate cycle
Varpa_5196	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Varpa_5196	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Varpa_5198	PWY-6695	oxalate degradation II
Varpa_5200	PWY-6695	oxalate degradation II
Varpa_5201	PWY-6695	oxalate degradation II
Varpa_5201	PWY-6696	oxalate degradation III
Varpa_5203	PWY-7205	CMP phosphorylation
Varpa_5217	PWY-5686	UMP biosynthesis
Varpa_5218	PWY-5686	UMP biosynthesis
Varpa_5230	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Varpa_5232	PWY-6123	inosine-5'-phosphate biosynthesis I
Varpa_5232	PWY-6124	inosine-5'-phosphate biosynthesis II
Varpa_5232	PWY-7234	inosine-5'-phosphate biosynthesis III
Varpa_5310	PWY-2201	folate transformations I
Varpa_5310	PWY-3841	folate transformations II
Varpa_5312	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Varpa_5358	PWY-4381	fatty acid biosynthesis initiation I
Varpa_5358	PWY-5743	3-hydroxypropanoate cycle
Varpa_5358	PWY-5744	glyoxylate assimilation
Varpa_5358	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Varpa_5358	PWY-6679	jadomycin biosynthesis
Varpa_5358	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Varpa_5365	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
Varpa_5369	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Varpa_5375	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Varpa_5375	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Varpa_5375	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Varpa_5375	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Varpa_5381	PWY-5101	L-isoleucine biosynthesis II
Varpa_5381	PWY-5103	L-isoleucine biosynthesis III
Varpa_5381	PWY-5104	L-isoleucine biosynthesis IV
Varpa_5381	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Varpa_5402	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Varpa_5414	PWY-6167	flavin biosynthesis II (archaea)
Varpa_5418	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Varpa_5418	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Varpa_5425	PWY-6134	L-tyrosine biosynthesis IV
Varpa_5425	PWY-7158	L-phenylalanine degradation V
Varpa_5450	PWY-2201	folate transformations I
Varpa_5450	PWY-5497	purine nucleobases degradation II (anaerobic)
Varpa_5455	PWY-4381	fatty acid biosynthesis initiation I
Varpa_5455	PWY-5743	3-hydroxypropanoate cycle
Varpa_5455	PWY-5744	glyoxylate assimilation
Varpa_5455	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Varpa_5455	PWY-6679	jadomycin biosynthesis
Varpa_5455	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Varpa_5460	PWY-5451	acetone degradation I (to methylglyoxal)
Varpa_5460	PWY-5665	vanillin biosynthesis I
Varpa_5460	PWY-6398	melatonin degradation I
Varpa_5460	PWY-6992	1,5-anhydrofructose degradation
Varpa_5460	PWY-7466	acetone degradation III (to propane-1,2-diol)
Varpa_5467	PWY-31	canavanine degradation
Varpa_5467	PWY-4984	urea cycle
Varpa_5467	PWY-6305	putrescine biosynthesis IV
Varpa_5467	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Varpa_5473	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Varpa_5508	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Varpa_5510	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Varpa_5518	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Varpa_5518	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Varpa_5519	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Varpa_5519	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Varpa_5519	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Varpa_5600	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Varpa_5600	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Varpa_5605	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Varpa_5605	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Varpa_5624	PWY-1361	benzoyl-CoA degradation I (aerobic)
Varpa_5624	PWY-5109	2-methylbutanoate biosynthesis
Varpa_5624	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Varpa_5624	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Varpa_5624	PWY-5177	glutaryl-CoA degradation
Varpa_5624	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Varpa_5624	PWY-6435	4-hydroxybenzoate biosynthesis V
Varpa_5624	PWY-6583	pyruvate fermentation to butanol I
Varpa_5624	PWY-6863	pyruvate fermentation to hexanol
Varpa_5624	PWY-6883	pyruvate fermentation to butanol II
Varpa_5624	PWY-6944	androstenedione degradation
Varpa_5624	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Varpa_5624	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Varpa_5624	PWY-7007	methyl ketone biosynthesis
Varpa_5624	PWY-7046	4-coumarate degradation (anaerobic)
Varpa_5624	PWY-7094	fatty acid salvage
Varpa_5624	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Varpa_5624	PWY-735	jasmonic acid biosynthesis
Varpa_5624	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Varpa_5627	PWY-3961	phosphopantothenate biosynthesis II
Varpa_5637	PWY-6654	phosphopantothenate biosynthesis III
Varpa_5638	PWY-6617	adenosine nucleotides degradation III
Varpa_5642	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Varpa_5642	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Varpa_5657	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
Varpa_5681	PWY-5381	pyridine nucleotide cycling (plants)
Varpa_5682	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Varpa_5682	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Varpa_5682	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Varpa_5682	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Varpa_5701	PWY-6854	ethylene biosynthesis III (microbes)
Varpa_5774	PWY-3341	L-proline biosynthesis III
Varpa_5774	PWY-4981	L-proline biosynthesis II (from arginine)
Varpa_5774	PWY-6344	L-ornithine degradation II (Stickland reaction)
Varpa_5789	PWY-6700	queuosine biosynthesis
Varpa_5790	PWY-6700	queuosine biosynthesis
Varpa_5801	PWY-5686	UMP biosynthesis
Varpa_5807	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Varpa_5807	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Varpa_5811	PWY-6123	inosine-5'-phosphate biosynthesis I
Varpa_5811	PWY-7234	inosine-5'-phosphate biosynthesis III
Varpa_5816	PWY-6123	inosine-5'-phosphate biosynthesis I
Varpa_5816	PWY-6124	inosine-5'-phosphate biosynthesis II
Varpa_5816	PWY-7234	inosine-5'-phosphate biosynthesis III
Varpa_5817	PWY-1042	glycolysis IV (plant cytosol)
Varpa_5817	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Varpa_5817	PWY-5484	glycolysis II (from fructose 6-phosphate)
Varpa_5817	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Varpa_5817	PWY-7385	1,3-propanediol biosynthesis (engineered)
Varpa_5821	PWY-1042	glycolysis IV (plant cytosol)
Varpa_5821	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Varpa_5821	PWY-5484	glycolysis II (from fructose 6-phosphate)
Varpa_5821	PWY-5723	Rubisco shunt
Varpa_5821	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Varpa_5821	PWY-6886	1-butanol autotrophic biosynthesis
Varpa_5821	PWY-6901	superpathway of glucose and xylose degradation
Varpa_5821	PWY-7003	glycerol degradation to butanol
Varpa_5821	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Varpa_5821	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Varpa_5822	PWY-1042	glycolysis IV (plant cytosol)
Varpa_5822	PWY-5484	glycolysis II (from fructose 6-phosphate)
Varpa_5822	PWY-6886	1-butanol autotrophic biosynthesis
Varpa_5822	PWY-6901	superpathway of glucose and xylose degradation
Varpa_5822	PWY-7003	glycerol degradation to butanol
Varpa_5851	PWY-6167	flavin biosynthesis II (archaea)
Varpa_5854	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Varpa_5854	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Varpa_5865	PWY-6891	thiazole biosynthesis II (Bacillus)
Varpa_5865	PWY-6892	thiazole biosynthesis I (E. coli)
Varpa_5865	PWY-7560	methylerythritol phosphate pathway II
Varpa_5888	PWY-6123	inosine-5'-phosphate biosynthesis I
Varpa_5888	PWY-6124	inosine-5'-phosphate biosynthesis II
Varpa_5888	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Varpa_5888	PWY-7234	inosine-5'-phosphate biosynthesis III
Varpa_5914	PWY-5392	reductive TCA cycle II
Varpa_5914	PWY-5537	pyruvate fermentation to acetate V
Varpa_5914	PWY-5538	pyruvate fermentation to acetate VI
Varpa_5914	PWY-5690	TCA cycle II (plants and fungi)
Varpa_5914	PWY-5913	TCA cycle VI (obligate autotrophs)
Varpa_5914	PWY-6728	methylaspartate cycle
Varpa_5914	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Varpa_5914	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Varpa_5915	PWY-5392	reductive TCA cycle II
Varpa_5915	PWY-5537	pyruvate fermentation to acetate V
Varpa_5915	PWY-5538	pyruvate fermentation to acetate VI
Varpa_5915	PWY-5690	TCA cycle II (plants and fungi)
Varpa_5915	PWY-5913	TCA cycle VI (obligate autotrophs)
Varpa_5915	PWY-6728	methylaspartate cycle
Varpa_5915	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Varpa_5915	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Varpa_5916	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Varpa_5916	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Varpa_5928	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Varpa_5928	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Varpa_5934	PWY-5506	methanol oxidation to formaldehyde IV
Varpa_5973	PWY-1042	glycolysis IV (plant cytosol)
Varpa_5973	PWY-5484	glycolysis II (from fructose 6-phosphate)
Varpa_5973	PWY-6901	superpathway of glucose and xylose degradation
Varpa_5973	PWY-7003	glycerol degradation to butanol
Varpa_5974	PWY-6891	thiazole biosynthesis II (Bacillus)
Varpa_5974	PWY-6892	thiazole biosynthesis I (E. coli)
Varpa_5974	PWY-7560	methylerythritol phosphate pathway II
Varpa_5975	PWY-6834	spermidine biosynthesis III
Varpa_5991	PWY-1281	sulfoacetaldehyde degradation I
Varpa_5991	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Varpa_5991	PWY-5482	pyruvate fermentation to acetate II
Varpa_5991	PWY-5485	pyruvate fermentation to acetate IV
Varpa_5991	PWY-5497	purine nucleobases degradation II (anaerobic)
Varpa_5991	PWY-6637	sulfolactate degradation II
Varpa_5991	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Varpa_6009	PWY-5344	L-homocysteine biosynthesis
Varpa_6014	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Varpa_6014	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)