VAA_00002	SSF46894	C-terminal effector domain of the bipartite response regulators
VAA_00002	SSF52172	CheY-like
VAA_00008	SSF141571	Pentapeptide repeat-like
VAA_00010	SSF143011	RelE-like
VAA_00011	SSF143120	YefM-like
VAA_00021	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
VAA_00027	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
VAA_00058	SSF82784	OsmC-like
VAA_00068	SSF55729	Acyl-CoA N-acyltransferases (Nat)
VAA_00069	SSF109604	HD-domain/PDEase-like
VAA_00070	SSF109604	HD-domain/PDEase-like
VAA_00089	SSF47598	Ribbon-helix-helix
VAA_00090	SSF55729	Acyl-CoA N-acyltransferases (Nat)
VAA_00093	SSF54928	RNA-binding domain, RBD
VAA_00097	SSF110849	ParB/Sulfiredoxin
VAA_00098	SSF53850	Periplasmic binding protein-like II
VAA_00100	SSF55729	Acyl-CoA N-acyltransferases (Nat)
VAA_00103	SSF47598	Ribbon-helix-helix
VAA_00104	SSF55729	Acyl-CoA N-acyltransferases (Nat)
VAA_00169	SSF56112	Protein kinase-like (PK-like)
VAA_00171	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_00214	SSF55729	Acyl-CoA N-acyltransferases (Nat)
VAA_00215	SSF50814	Lipocalins
VAA_00228	SSF50044	SH3-domain
VAA_00229	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
VAA_00237	SSF46575	DNA polymerase III theta subunit-like
VAA_00238	SSF75625	YebC-like
VAA_00239	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
VAA_00239	SSF51735	NAD(P)-binding Rossmann-fold domains
VAA_00241	SSF58100	Bacterial hemolysins
VAA_00242	SSF58100	Bacterial hemolysins
VAA_00243	SSF58100	Bacterial hemolysins
VAA_00247	SSF46785	"Winged helix" DNA-binding domain
VAA_00247	SSF53850	Periplasmic binding protein-like II
VAA_00248	SSF51735	NAD(P)-binding Rossmann-fold domains
VAA_00253	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
VAA_00253	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
VAA_00254	SSF48150	DNA-glycosylase
VAA_00254	SSF55945	TATA-box binding protein-like
VAA_00312	SSF53098	Ribonuclease H-like
VAA_00313	SSF46689	Homeodomain-like
VAA_00317	SSF53098	Ribonuclease H-like
VAA_00320	SSF47413	lambda repressor-like DNA-binding domains
VAA_00322	SSF50249	Nucleic acid-binding proteins
VAA_00325	SSF55159	eIF1-like
VAA_00327	SSF47823	lambda integrase-like, N-terminal domain
VAA_00327	SSF56349	DNA breaking-rejoining enzymes
VAA_00329	SSF52440	PreATP-grasp domain
VAA_00329	SSF56059	Glutathione synthetase ATP-binding domain-like
VAA_00330	SSF110997	Sporulation related repeat
VAA_00331	SSF51735	NAD(P)-binding Rossmann-fold domains
VAA_00331	SSF52210	Succinyl-CoA synthetase domains
VAA_00331	SSF55729	Acyl-CoA N-acyltransferases (Nat)
VAA_00331	SSF56059	Glutathione synthetase ATP-binding domain-like
VAA_00332	SSF46785	"Winged helix" DNA-binding domain
VAA_00332	SSF53850	Periplasmic binding protein-like II
VAA_00886	SSF53613	Ribokinase-like
VAA_00887	SSF141868	EAL domain-like
VAA_00887	SSF55073	Nucleotide cyclase
VAA_00887	SSF55785	PYP-like sensor domain (PAS domain)
VAA_00888	SSF51069	Carbonic anhydrase
VAA_00889	SSF53383	PLP-dependent transferases
VAA_00890	SSF103190	Sensory domain-like
VAA_00890	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
VAA_00892	SSF52768	Arginase/deacetylase
VAA_00893	SSF51419	PLP-binding barrel
VAA_00894	SSF48452	TPR-like
VAA_00895	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_00895	SSF54631	CBS-domain pair
VAA_00896	SSF161098	MetI-like
VAA_00897	SSF53850	Periplasmic binding protein-like II
VAA_00898	SSF46785	"Winged helix" DNA-binding domain
VAA_00900	SSF50182	Sm-like ribonucleoproteins
VAA_00901	SSF158791	MgtE N-terminal domain-like
VAA_00901	SSF161093	MgtE membrane domain-like
VAA_00901	SSF54631	CBS-domain pair
VAA_00902	SSF53633	Carbamate kinase-like
VAA_00902	SSF55021	ACT-like
VAA_00903	SSF51182	RmlC-like cupins
VAA_00904	SSF53383	PLP-dependent transferases
VAA_00905	SSF55729	Acyl-CoA N-acyltransferases (Nat)
VAA_00907	SSF52374	Nucleotidylyl transferase
VAA_00908	SSF52402	Adenine nucleotide alpha hydrolases-like
VAA_00909	SSF46689	Homeodomain-like
VAA_00914	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
VAA_00916	SSF103190	Sensory domain-like
VAA_00916	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
VAA_00917	SSF51445	(Trans)glycosidases
VAA_00918	SSF52833	Thioredoxin-like
VAA_00920	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
VAA_00921	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_00924	SSF53300	vWA-like
VAA_00925	SSF48452	TPR-like
VAA_00925	SSF53300	vWA-like
VAA_00928	SSF55073	Nucleotide cyclase
VAA_00928	SSF55781	GAF domain-like
VAA_00929	SSF141523	L,D-transpeptidase catalytic domain-like
VAA_00932	SSF53649	Alkaline phosphatase-like
VAA_00933	SSF81342	Transmembrane di-heme cytochromes
VAA_00935	SSF50129	GroES-like
VAA_00935	SSF51735	NAD(P)-binding Rossmann-fold domains
VAA_00936	SSF53383	PLP-dependent transferases
VAA_00937	SSF46785	"Winged helix" DNA-binding domain
VAA_00937	SSF53850	Periplasmic binding protein-like II
VAA_00938	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
VAA_00940	SSF103473	MFS general substrate transporter
VAA_00941	SSF46894	C-terminal effector domain of the bipartite response regulators
VAA_00941	SSF52172	CheY-like
VAA_00942	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
VAA_00943	SSF103473	MFS general substrate transporter
VAA_00944	SSF47175	Cytochromes
VAA_00945	SSF89550	PHP domain-like
VAA_00946	SSF103190	Sensory domain-like
VAA_00946	SSF109604	HD-domain/PDEase-like
VAA_00946	SSF55781	GAF domain-like
VAA_00947	SSF75217	alpha/beta knot
VAA_00948	SSF103473	MFS general substrate transporter
VAA_00949	SSF52799	(Phosphotyrosine protein) phosphatases II
VAA_00950	SSF51735	NAD(P)-binding Rossmann-fold domains
VAA_00950	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
VAA_00951	SSF46785	"Winged helix" DNA-binding domain
VAA_00953	SSF46785	"Winged helix" DNA-binding domain
VAA_00954	SSF52091	SpoIIaa-like
VAA_00955	SSF52402	Adenine nucleotide alpha hydrolases-like
VAA_00957	SSF47384	Homodimeric domain of signal transducing histidine kinase
VAA_00957	SSF52172	CheY-like
VAA_00957	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
VAA_00958	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
VAA_00959	SSF51735	NAD(P)-binding Rossmann-fold domains
VAA_00959	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
VAA_0096	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_00960	SSF55785	PYP-like sensor domain (PAS domain)
VAA_00961	SSF103039	CheC-like
VAA_00961	SSF52172	CheY-like
VAA_00964	SSF50249	Nucleic acid-binding proteins
VAA_00965	SSF52980	Restriction endonuclease-like
VAA_00966	SSF46458	Globin-like
VAA_00966	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
VAA_00966	SSF63380	Riboflavin synthase domain-like
VAA_00967	SSF46689	Homeodomain-like
VAA_00967	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_00967	SSF55781	GAF domain-like
VAA_00968	SSF50182	Sm-like ribonucleoproteins
VAA_00969	SSF53187	Zn-dependent exopeptidases
VAA_00969	SSF55031	Bacterial exopeptidase dimerisation domain
VAA_00971	SSF141673	MOSC N-terminal domain-like
VAA_00971	SSF50800	PK beta-barrel domain-like
VAA_00971	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
VAA_00971	SSF54292	2Fe-2S ferredoxin-like
VAA_00971	SSF63380	Riboflavin synthase domain-like
VAA_00972	SSF51556	Metallo-dependent hydrolases
VAA_00973	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
VAA_00976	SSF109604	HD-domain/PDEase-like
VAA_00978	SSF53187	Zn-dependent exopeptidases
VAA_00979	SSF69635	Type III secretory system chaperone-like
VAA_00982	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_00984	SSF46955	Putative DNA-binding domain
VAA_00984	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
VAA_00985	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
VAA_00987	SSF110849	ParB/Sulfiredoxin
VAA_00989	SSF52218	Flavoproteins
VAA_00990	SSF51430	NAD(P)-linked oxidoreductase
VAA_00991	SSF46785	"Winged helix" DNA-binding domain
VAA_00991	SSF53850	Periplasmic binding protein-like II
VAA_00994	SSF111369	HlyD-like secretion proteins
VAA_00996	SSF81324	Voltage-gated potassium channels
VAA_00997	SSF53383	PLP-dependent transferases
VAA_00998	SSF51230	Single hybrid motif
VAA_00999	SSF53383	PLP-dependent transferases
VAA_01000	SSF47413	lambda repressor-like DNA-binding domains
VAA_01000	SSF51182	RmlC-like cupins
VAA_01001	SSF101790	Aminomethyltransferase beta-barrel domain
VAA_01001	SSF103025	Folate-binding domain
VAA_01002	SSF50494	Trypsin-like serine proteases
VAA_01003	SSF63411	LuxS/MPP-like metallohydrolase
VAA_01005	SSF52794	PTS system IIB component-like
VAA_01006	SSF53613	Ribokinase-like
VAA_01007	SSF55594	HPr-like
VAA_01007	SSF55804	Phoshotransferase/anion transport protein
VAA_01008	SSF47413	lambda repressor-like DNA-binding domains
VAA_01008	SSF53822	Periplasmic binding protein-like I
VAA_01009	SSF56300	Metallo-dependent phosphatases
VAA_01010	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_01011	SSF47384	Homodimeric domain of signal transducing histidine kinase
VAA_01011	SSF52172	CheY-like
VAA_01011	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
VAA_01012	SSF53383	PLP-dependent transferases
VAA_01014	SSF81340	Clc chloride channel
VAA_01015	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_01016	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_01019	SSF56954	Outer membrane efflux proteins (OEP)
VAA_01020	SSF111369	HlyD-like secretion proteins
VAA_01021	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_01024	SSF53474	alpha/beta-Hydrolases
VAA_01027	SSF47413	lambda repressor-like DNA-binding domains
VAA_01030	SSF141530	PTSIIA/GutA-like
VAA_01031	SSF51735	NAD(P)-binding Rossmann-fold domains
VAA_01032	SSF100950	NagB/RpiA/CoA transferase-like
VAA_01032	SSF46785	"Winged helix" DNA-binding domain
VAA_01035	SSF141530	PTSIIA/GutA-like
VAA_01036	SSF50331	MOP-like
VAA_01036	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_01039	SSF51161	Trimeric LpxA-like enzymes
VAA_01040	SSF56925	OMPA-like
VAA_01041	SSF53850	Periplasmic binding protein-like II
VAA_01042	SSF160964	MalF N-terminal region-like
VAA_01042	SSF161098	MetI-like
VAA_01043	SSF161098	MetI-like
VAA_01044	SSF81296	E set domains
VAA_01046	SSF46785	"Winged helix" DNA-binding domain
VAA_01049	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
VAA_01050	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
VAA_01052	SSF48695	Multiheme cytochromes
VAA_01053	SSF48695	Multiheme cytochromes
VAA_01054	SSF50692	ADC-like
VAA_01054	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
VAA_01056	SSF54862	4Fe-4S ferredoxins
VAA_01058	SSF158472	HAMP domain-like
VAA_01058	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
VAA_01059	SSF46894	C-terminal effector domain of the bipartite response regulators
VAA_01059	SSF52172	CheY-like
VAA_01062	SSF55729	Acyl-CoA N-acyltransferases (Nat)
VAA_01063	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
VAA_01064	SSF53850	Periplasmic binding protein-like II
VAA_01066	SSF50249	Nucleic acid-binding proteins
VAA_01067	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_01068	SSF52954	Class II aaRS ABD-related
VAA_01068	SSF55186	ThrRS/AlaRS common domain
VAA_01068	SSF55681	Class II aaRS and biotin synthetases
VAA_01068	SSF81271	TGS-like
VAA_01069	SSF54364	Translation initiation factor IF3, N-terminal domain
VAA_01069	SSF55200	Translation initiation factor IF3, C-terminal domain
VAA_01070	SSF143034	L35p-like
VAA_01071	SSF74731	Ribosomal protein L20
VAA_01072	SSF56349	DNA breaking-rejoining enzymes
VAA_01241	SSF46689	Homeodomain-like
VAA_01241	SSF51182	RmlC-like cupins
VAA_01242	SSF103481	Multidrug resistance efflux transporter EmrE
VAA_01243	SSF55073	Nucleotide cyclase
VAA_01243	SSF55785	PYP-like sensor domain (PAS domain)
VAA_01244	SSF100950	NagB/RpiA/CoA transferase-like
VAA_01244	SSF46785	"Winged helix" DNA-binding domain
VAA_01245	SSF46894	C-terminal effector domain of the bipartite response regulators
VAA_01245	SSF75516	Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
VAA_01246	SSF55729	Acyl-CoA N-acyltransferases (Nat)
VAA_01247	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
VAA_01249	SSF161098	MetI-like
VAA_01250	SSF160964	MalF N-terminal region-like
VAA_01250	SSF161098	MetI-like
VAA_01251	SSF53850	Periplasmic binding protein-like II
VAA_01252	SSF50331	MOP-like
VAA_01252	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_01253	SSF46894	C-terminal effector domain of the bipartite response regulators
VAA_01254	SSF54534	FKBP-like
VAA_01256	SSF50341	CheW-like
VAA_01256	SSF52172	CheY-like
VAA_01257	SSF142906	YjbR-like
VAA_01259	SSF51645	Malate synthase G
VAA_01260	SSF47413	lambda repressor-like DNA-binding domains
VAA_01261	SSF55073	Nucleotide cyclase
VAA_01263	SSF103481	Multidrug resistance efflux transporter EmrE
VAA_01264	SSF46785	"Winged helix" DNA-binding domain
VAA_01264	SSF53850	Periplasmic binding protein-like II
VAA_01265	SSF55073	Nucleotide cyclase
VAA_01267	SSF51182	RmlC-like cupins
VAA_01268	SSF53850	Periplasmic binding protein-like II
VAA_01269	SSF51182	RmlC-like cupins
VAA_01271	SSF51569	Aldolase
VAA_01272	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_01273	SSF161098	MetI-like
VAA_01274	SSF53850	Periplasmic binding protein-like II
VAA_01275	SSF161098	MetI-like
VAA_01277	SSF53738	Phosphoglucomutase, first 3 domains
VAA_01277	SSF55957	Phosphoglucomutase, C-terminal domain
VAA_01278	SSF46689	Homeodomain-like
VAA_01278	SSF51215	Regulatory protein AraC
VAA_01281	SSF56529	FAH
VAA_012815	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_012817	SSF56784	HAD-like
VAA_01282	SSF56935	Porins
VAA_01283	SSF103481	Multidrug resistance efflux transporter EmrE
VAA_01284	SSF52833	Thioredoxin-like
VAA_01287	SSF103473	MFS general substrate transporter
VAA_01288	SSF46785	"Winged helix" DNA-binding domain
VAA_01288	SSF53850	Periplasmic binding protein-like II
VAA_01290	SSF141868	EAL domain-like
VAA_01290	SSF55073	Nucleotide cyclase
VAA_01290	SSF55781	GAF domain-like
VAA_01291	SSF51261	Duplicated hybrid motif
VAA_01292	SSF81296	E set domains
VAA_01293	SSF52091	SpoIIaa-like
VAA_01295	SSF56524	Oxidoreductase molybdopterin-binding domain
VAA_01296	SSF55073	Nucleotide cyclase
VAA_01297	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_01298	SSF161098	MetI-like
VAA_01299	SSF161098	MetI-like
VAA_01300	SSF53850	Periplasmic binding protein-like II
VAA_01301	SSF103481	Multidrug resistance efflux transporter EmrE
VAA_01302	SSF46785	"Winged helix" DNA-binding domain
VAA_01302	SSF53383	PLP-dependent transferases
VAA_01303	SSF55729	Acyl-CoA N-acyltransferases (Nat)
VAA_01304	SSF101744	Rof/RNase P subunit-like
VAA_01306	SSF55486	Metalloproteases ("zincins"), catalytic domain
VAA_01306	SSF89260	Collagen-binding domain
VAA_01309	SSF56925	OMPA-like
VAA_01310	SSF54403	Cystatin/monellin
VAA_01311	SSF51055	Carbohydrate binding domain
VAA_01311	SSF81296	E set domains
VAA_01312	SSF103473	MFS general substrate transporter
VAA_01313	SSF51695	PLC-like phosphodiesterases
VAA_01314	SSF46785	"Winged helix" DNA-binding domain
VAA_01314	SSF53850	Periplasmic binding protein-like II
VAA_01315	SSF117856	AF0104/ALDC/Ptd012-like
VAA_01316	SSF52467	DHS-like NAD/FAD-binding domain
VAA_01316	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
VAA_01317	SSF51735	NAD(P)-binding Rossmann-fold domains
VAA_01319	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_01320	SSF46785	"Winged helix" DNA-binding domain
VAA_01320	SSF53850	Periplasmic binding protein-like II
VAA_01322	SSF51395	FMN-linked oxidoreductases
VAA_01323	SSF46548	alpha-helical ferredoxin
VAA_01323	SSF55103	FAD-linked oxidases, C-terminal domain
VAA_01323	SSF56176	FAD-binding/transporter-associated domain-like
VAA_01324	SSF46689	Homeodomain-like
VAA_01325	SSF49777	PEBP-like
VAA_01330	SSF56219	DNase I-like
VAA_01331	SSF75217	alpha/beta knot
VAA_01332	SSF53649	Alkaline phosphatase-like
VAA_01333	SSF55785	PYP-like sensor domain (PAS domain)
VAA_01333	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
VAA_01335	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
VAA_01336	SSF47413	lambda repressor-like DNA-binding domains
VAA_01336	SSF53822	Periplasmic binding protein-like I
VAA_01337	SSF51445	(Trans)glycosidases
VAA_01337	SSF52279	Beta-D-glucan exohydrolase, C-terminal domain
VAA_01338	SSF50331	MOP-like
VAA_01338	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_01339	SSF161098	MetI-like
VAA_01340	SSF161098	MetI-like
VAA_01341	SSF53850	Periplasmic binding protein-like II
VAA_01342	SSF47413	lambda repressor-like DNA-binding domains
VAA_01342	SSF53822	Periplasmic binding protein-like I
VAA_01343	SSF56935	Porins
VAA_01347	SSF56281	Metallo-hydrolase/oxidoreductase
VAA_01348	SSF103473	MFS general substrate transporter
VAA_01349	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
VAA_01350	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_01350	SSF54211	Ribosomal protein S5 domain 2-like
VAA_01352	SSF51735	NAD(P)-binding Rossmann-fold domains
VAA_01352	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
VAA_01353	SSF100950	NagB/RpiA/CoA transferase-like
VAA_01354	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
VAA_01354	SSF51735	NAD(P)-binding Rossmann-fold domains
VAA_01356	SSF46785	"Winged helix" DNA-binding domain
VAA_01356	SSF53850	Periplasmic binding protein-like II
VAA_01358	SSF56281	Metallo-hydrolase/oxidoreductase
VAA_01359	SSF52833	Thioredoxin-like
VAA_01494	SSF109604	HD-domain/PDEase-like
VAA_01495	SSF56784	HAD-like
VAA_01497	SSF46565	Chaperone J-domain
VAA_01498	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_01499	SSF141868	EAL domain-like
VAA_01499	SSF55073	Nucleotide cyclase
VAA_01499	SSF55781	GAF domain-like
VAA_01502	SSF52266	SGNH hydrolase
VAA_01503	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_01505	SSF51905	FAD/NAD(P)-binding domain
VAA_01506	SSF50891	Cyclophilin-like
VAA_01507	SSF160467	PH0987 N-terminal domain-like
VAA_01507	SSF50891	Cyclophilin-like
VAA_01508	SSF88713	Glycoside hydrolase/deacetylase
VAA_01509	SSF51735	NAD(P)-binding Rossmann-fold domains
VAA_01510	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
VAA_01512	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_01513	SSF46689	Homeodomain-like
VAA_01514	SSF53383	PLP-dependent transferases
VAA_01515	SSF55811	Nudix
VAA_01516	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_01517	SSF53300	vWA-like
VAA_01518	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_01519	SSF161098	MetI-like
VAA_01520	SSF53850	Periplasmic binding protein-like II
VAA_01521	SSF51905	FAD/NAD(P)-binding domain
VAA_01521	SSF54373	FAD-linked reductases, C-terminal domain
VAA_01522	SSF53720	ALDH-like
VAA_01523	SSF46689	Homeodomain-like
VAA_01523	SSF48498	Tetracyclin repressor-like, C-terminal domain
VAA_01524	SSF53474	alpha/beta-Hydrolases
VAA_01525	SSF51905	FAD/NAD(P)-binding domain
VAA_01525	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
VAA_01525	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
VAA_01526	SSF50022	ISP domain
VAA_01528	SSF53790	Tetrapyrrole methylase
VAA_01532	SSF103473	MFS general substrate transporter
VAA_01533	SSF52833	Thioredoxin-like
VAA_01534	SSF53901	Thiolase-like
VAA_01535	SSF46548	alpha-helical ferredoxin
VAA_01536	SSF51905	FAD/NAD(P)-binding domain
VAA_01537	SSF51905	FAD/NAD(P)-binding domain
VAA_01537	SSF54373	FAD-linked reductases, C-terminal domain
VAA_01538	SSF81338	Aquaporin-like
VAA_01539	SSF53067	Actin-like ATPase domain
VAA_01543	SSF46785	"Winged helix" DNA-binding domain
VAA_01544	SSF82771	GIY-YIG endonuclease
VAA_01546	SSF53822	Periplasmic binding protein-like I
VAA_01548	SSF103190	Sensory domain-like
VAA_01548	SSF47384	Homodimeric domain of signal transducing histidine kinase
VAA_01548	SSF52172	CheY-like
VAA_01548	SSF55785	PYP-like sensor domain (PAS domain)
VAA_01548	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
VAA_01549	SSF141371	PilZ domain-like
VAA_01552	SSF55035	NAD-binding domain of HMG-CoA reductase
VAA_01552	SSF56542	Substrate-binding domain of HMG-CoA reductase
VAA_01556	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_01557	SSF52335	Methylglyoxal synthase-like
VAA_01558	SSF53822	Periplasmic binding protein-like I
VAA_01560	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
VAA_01560	SSF47384	Homodimeric domain of signal transducing histidine kinase
VAA_01560	SSF52172	CheY-like
VAA_01560	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
VAA_01561	SSF50800	PK beta-barrel domain-like
VAA_01561	SSF51621	Phosphoenolpyruvate/pyruvate domain
VAA_01561	SSF52935	PK C-terminal domain-like
VAA_01562	SSF103473	MFS general substrate transporter
VAA_01564	SSF53850	Periplasmic binding protein-like II
VAA_01565	SSF47384	Homodimeric domain of signal transducing histidine kinase
VAA_01565	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
VAA_01566	SSF46689	Homeodomain-like
VAA_01566	SSF52172	CheY-like
VAA_01566	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_01567	SSF56796	Dehydroquinate synthase-like
VAA_01568	SSF46689	Homeodomain-like
VAA_01569	SSF49299	PKD domain
VAA_01569	SSF51055	Carbohydrate binding domain
VAA_01569	SSF51445	(Trans)glycosidases
VAA_01569	SSF54556	Chitinase insertion domain
VAA_01570	SSF51161	Trimeric LpxA-like enzymes
VAA_01570	SSF53448	Nucleotide-diphospho-sugar transferases
VAA_01571	SSF103190	Sensory domain-like
VAA_01571	SSF55073	Nucleotide cyclase
VAA_01571	SSF55785	PYP-like sensor domain (PAS domain)
VAA_01573	SSF101756	Hypothetical protein YgiW
VAA_01574	SSF52317	Class I glutamine amidotransferase-like
VAA_01574	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_01575	SSF53850	Periplasmic binding protein-like II
VAA_01576	SSF161098	MetI-like
VAA_01577	SSF50331	MOP-like
VAA_01577	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_01578	SSF158675	Sama2622-like
VAA_01579	SSF52172	CheY-like
VAA_01579	SSF55073	Nucleotide cyclase
VAA_01580	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
VAA_01581	SSF109604	HD-domain/PDEase-like
VAA_01581	SSF52172	CheY-like
VAA_01582	SSF52172	CheY-like
VAA_01583	SSF103039	CheC-like
VAA_01584	SSF47384	Homodimeric domain of signal transducing histidine kinase
VAA_01584	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
VAA_01585	SSF47384	Homodimeric domain of signal transducing histidine kinase
VAA_01585	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
VAA_01586	SSF141868	EAL domain-like
VAA_01586	SSF52172	CheY-like
VAA_01586	SSF55073	Nucleotide cyclase
VAA_01587	SSF109604	HD-domain/PDEase-like
VAA_01587	SSF52172	CheY-like
VAA_01589	SSF51905	FAD/NAD(P)-binding domain
VAA_01589	SSF52821	Rhodanese/Cell cycle control phosphatase
VAA_01589	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
VAA_01591	SSF46785	"Winged helix" DNA-binding domain
VAA_01594	SSF111369	HlyD-like secretion proteins
VAA_01595	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
VAA_01595	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
VAA_01595	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
VAA_01596	SSF53850	Periplasmic binding protein-like II
VAA_01596	SSF55073	Nucleotide cyclase
VAA_01597	SSF51998	PFL-like glycyl radical enzymes
VAA_01598	SSF102114	Radical SAM enzymes
VAA_01599	SSF53383	PLP-dependent transferases
VAA_01601	SSF50630	Acid proteases
VAA_01602	SSF64182	DHH phosphoesterases
VAA_01603	SSF53850	Periplasmic binding protein-like II
VAA_01604	SSF161098	MetI-like
VAA_01605	SSF161098	MetI-like
VAA_01606	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_01607	SSF141868	EAL domain-like
VAA_01610	SSF81342	Transmembrane di-heme cytochromes
VAA_01611	SSF101874	YceI-like
VAA_01612	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
VAA_01613	SSF56784	HAD-like
VAA_01614	SSF54534	FKBP-like
VAA_01615	SSF52833	Thioredoxin-like
VAA_01616	SSF103088	OmpA-like
VAA_01618	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
VAA_01618	SSF52922	TK C-terminal domain-like
VAA_01620	SSF51569	Aldolase
VAA_01621	SSF100950	NagB/RpiA/CoA transferase-like
VAA_01623	SSF51445	(Trans)glycosidases
VAA_01623	SSF54556	Chitinase insertion domain
VAA_01624	SSF52821	Rhodanese/Cell cycle control phosphatase
VAA_01625	SSF69572	Activating enzymes of the ubiquitin-like proteins
VAA_01626	SSF53218	Molybdenum cofactor biosynthesis proteins
VAA_01626	SSF63867	MoeA C-terminal domain-like
VAA_01626	SSF63882	MoeA N-terminal region -like
VAA_01627	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
VAA_01628	SSF51316	Mss4-like
VAA_01628	SSF55068	Peptide methionine sulfoxide reductase
VAA_01629	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_01631	SSF55315	L30e-like
VAA_01631	SSF75217	alpha/beta knot
VAA_01632	SSF54862	4Fe-4S ferredoxins
VAA_01633	SSF51905	FAD/NAD(P)-binding domain
VAA_01634	SSF56784	HAD-like
VAA_01635	SSF54534	FKBP-like
VAA_01636	SSF46785	"Winged helix" DNA-binding domain
VAA_01636	SSF64288	Chorismate lyase-like
VAA_01637	SSF63380	Riboflavin synthase domain-like
VAA_01638	SSF103473	MFS general substrate transporter
VAA_01640	SSF54631	CBS-domain pair
VAA_01641	SSF46785	"Winged helix" DNA-binding domain
VAA_01641	SSF53850	Periplasmic binding protein-like II
VAA_01643	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_01644	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
VAA_01644	SSF56300	Metallo-dependent phosphatases
VAA_01898	SSF53850	Periplasmic binding protein-like II
VAA_01899	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_01899	SSF55729	Acyl-CoA N-acyltransferases (Nat)
VAA_01900	SSF52091	SpoIIaa-like
VAA_01901	SSF52172	CheY-like
VAA_01902	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
VAA_01902	SSF47384	Homodimeric domain of signal transducing histidine kinase
VAA_01902	SSF50341	CheW-like
VAA_01902	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
VAA_01903	SSF50341	CheW-like
VAA_01904	SSF50341	CheW-like
VAA_01905	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
VAA_01906	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
VAA_01906	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
VAA_01907	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
VAA_01908	SSF52172	CheY-like
VAA_01908	SSF52738	Methylesterase CheB, C-terminal domain
VAA_01909	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
VAA_01910	SSF52091	SpoIIaa-like
VAA_01912	SSF52172	CheY-like
VAA_01913	SSF63848	Cell-division inhibitor MinC, C-terminal domain
VAA_01914	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_01914	SSF90123	ABC transporter transmembrane region
VAA_01915	SSF141868	EAL domain-like
VAA_01915	SSF55073	Nucleotide cyclase
VAA_01917	SSF111369	HlyD-like secretion proteins
VAA_01917	SSF56954	Outer membrane efflux proteins (OEP)
VAA_01918	SSF50475	FMN-binding split barrel
VAA_01919	SSF46894	C-terminal effector domain of the bipartite response regulators
VAA_01919	SSF55785	PYP-like sensor domain (PAS domain)
VAA_01920	SSF56436	C-type lectin-like
VAA_01922	SSF46689	Homeodomain-like
VAA_01923	SSF51730	FAD-linked oxidoreductase
VAA_01923	SSF53720	ALDH-like
VAA_01923	SSF81935	N-terminal domain of bifunctional PutA protein
VAA_01924	SSF53720	ALDH-like
VAA_01927	SSF103190	Sensory domain-like
VAA_01927	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
VAA_01928	SSF46785	"Winged helix" DNA-binding domain
VAA_01928	SSF54909	Dimeric alpha+beta barrel
VAA_01929	SSF53720	ALDH-like
VAA_01930	SSF53850	Periplasmic binding protein-like II
VAA_01933	SSF55821	YrdC/RibB
VAA_01934	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
VAA_01936	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
VAA_01938	SSF46894	C-terminal effector domain of the bipartite response regulators
VAA_01938	SSF48452	TPR-like
VAA_01938	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_01939	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
VAA_01940	SSF51445	(Trans)glycosidases
VAA_01941	SSF51011	Glycosyl hydrolase domain
VAA_01941	SSF51445	(Trans)glycosidases
VAA_01941	SSF81296	E set domains
VAA_01943	SSF141452	Hcp1-like
VAA_01944	SSF47090	PGBD-like
VAA_01944	SSF53955	Lysozyme-like
VAA_01944	SSF69255	gp5 N-terminal domain-like
VAA_01944	SSF69279	Phage tail proteins
VAA_01944	SSF69349	Phage fibre proteins
VAA_02783	SSF46689	Homeodomain-like
VAA_02783	SSF55945	TATA-box binding protein-like
VAA_02783	SSF57884	Ada DNA repair protein, N-terminal domain (N-Ada 10)
VAA_02784	SSF46785	"Winged helix" DNA-binding domain
VAA_02784	SSF53850	Periplasmic binding protein-like II
VAA_02787	SSF100950	NagB/RpiA/CoA transferase-like
VAA_02788	SSF51261	Duplicated hybrid motif
VAA_02789	SSF52794	PTS system IIB component-like
VAA_02789	SSF55804	Phoshotransferase/anion transport protein
VAA_02790	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
VAA_02790	SSF51735	NAD(P)-binding Rossmann-fold domains
VAA_02791	SSF158668	MtlR-like
VAA_02792	SSF51735	NAD(P)-binding Rossmann-fold domains
VAA_02792	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
VAA_02794	SSF118215	Proton glutamate symport protein
VAA_02797	SSF49785	Galactose-binding domain-like
VAA_02797	SSF55486	Metalloproteases ("zincins"), catalytic domain
VAA_02799	SSF111369	HlyD-like secretion proteins
VAA_02800	SSF46785	"Winged helix" DNA-binding domain
VAA_02802	SSF141868	EAL domain-like
VAA_02803	SSF48173	Cryptochrome/photolyase FAD-binding domain
VAA_02804	SSF52821	Rhodanese/Cell cycle control phosphatase
VAA_02806	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_02807	SSF111369	HlyD-like secretion proteins
VAA_02808	SSF56784	HAD-like
VAA_02809	SSF50331	MOP-like
VAA_02809	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_02810	SSF161098	MetI-like
VAA_02811	SSF161098	MetI-like
VAA_02812	SSF53649	Alkaline phosphatase-like
VAA_02813	SSF53850	Periplasmic binding protein-like II
VAA_02814	SSF46785	"Winged helix" DNA-binding domain
VAA_02814	SSF64288	Chorismate lyase-like
VAA_02816	SSF55298	YjgF-like
VAA_02818	SSF52091	SpoIIaa-like
VAA_02819	SSF102114	Radical SAM enzymes
VAA_02819	SSF54862	4Fe-4S ferredoxins
VAA_02820	SSF51998	PFL-like glycyl radical enzymes
VAA_02821	SSF47616	GST C-terminal domain-like
VAA_02821	SSF52833	Thioredoxin-like
VAA_02822	SSF50129	GroES-like
VAA_02822	SSF51735	NAD(P)-binding Rossmann-fold domains
VAA_02823	SSF46689	Homeodomain-like
VAA_02823	SSF48498	Tetracyclin repressor-like, C-terminal domain
VAA_02826	SSF46894	C-terminal effector domain of the bipartite response regulators
VAA_02826	SSF52172	CheY-like
VAA_02827	SSF47384	Homodimeric domain of signal transducing histidine kinase
VAA_02827	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
VAA_02828	SSF55120	Pseudouridine synthase
VAA_02830	SSF81901	HCP-like
VAA_02835	SSF160719	gpW/gp25-like
VAA_02839	SSF49879	SMAD/FHA domain
VAA_02843	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_02843	SSF81923	Double Clp-N motif
VAA_02844	SSF46689	Homeodomain-like
VAA_02844	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_02847	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_02849	SSF69255	gp5 N-terminal domain-like
VAA_02849	SSF69279	Phage tail proteins
VAA_02849	SSF69349	Phage fibre proteins
VAA_02854	SSF161084	MAPEG domain-like
VAA_02855	SSF55961	Bet v1-like
VAA_02856	SSF53850	Periplasmic binding protein-like II
VAA_02858	SSF46689	Homeodomain-like
VAA_02858	SSF48498	Tetracyclin repressor-like, C-terminal domain
VAA_02859	SSF53474	alpha/beta-Hydrolases
VAA_02862	SSF49299	PKD domain
VAA_02862	SSF51055	Carbohydrate binding domain
VAA_02862	SSF51445	(Trans)glycosidases
VAA_02862	SSF54556	Chitinase insertion domain
VAA_02862	SSF81296	E set domains
VAA_02863	SSF46785	"Winged helix" DNA-binding domain
VAA_02864	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_02866	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
VAA_02867	SSF46785	"Winged helix" DNA-binding domain
VAA_02867	SSF55781	GAF domain-like
VAA_02868	SSF52768	Arginase/deacetylase
VAA_02869	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
VAA_02871	SSF63829	Calcium-dependent phosphotriesterase
VAA_02872	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
VAA_02874	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_02874	SSF90123	ABC transporter transmembrane region
VAA_02876	SSF55909	Pentein
VAA_02877	SSF55073	Nucleotide cyclase
VAA_02878	SSF55073	Nucleotide cyclase
VAA_02878	SSF55785	PYP-like sensor domain (PAS domain)
VAA_02881	SSF51658	Xylose isomerase-like
VAA_02882	SSF51366	Ribulose-phoshate binding barrel
VAA_02883	SSF56784	HAD-like
VAA_02884	SSF53639	AraD/HMP-PK domain-like
VAA_02885	SSF55804	Phoshotransferase/anion transport protein
VAA_02886	SSF52794	PTS system IIB component-like
VAA_02888	SSF100950	NagB/RpiA/CoA transferase-like
VAA_02888	SSF46785	"Winged helix" DNA-binding domain
VAA_02889	SSF56281	Metallo-hydrolase/oxidoreductase
VAA_02890	SSF51011	Glycosyl hydrolase domain
VAA_02890	SSF51445	(Trans)glycosidases
VAA_02890	SSF81296	E set domains
VAA_02891	SSF56935	Porins
VAA_02893	SSF48208	Six-hairpin glycosidases
VAA_02894	SSF53850	Periplasmic binding protein-like II
VAA_02895	SSF46785	"Winged helix" DNA-binding domain
VAA_02895	SSF53850	Periplasmic binding protein-like II
VAA_02896	SSF51011	Glycosyl hydrolase domain
VAA_02896	SSF51445	(Trans)glycosidases
VAA_02897	SSF81901	HCP-like
VAA_02898	SSF118215	Proton glutamate symport protein
VAA_02899	SSF110087	DR1885-like metal-binding protein
VAA_02900	SSF52833	Thioredoxin-like
VAA_02904	SSF141371	PilZ domain-like
VAA_02905	SSF55729	Acyl-CoA N-acyltransferases (Nat)
VAA_02906	SSF56219	DNase I-like
VAA_02907	SSF103473	MFS general substrate transporter
VAA_02908	SSF111369	HlyD-like secretion proteins
VAA_02910	SSF48452	TPR-like
VAA_02910	SSF55073	Nucleotide cyclase
VAA_02911	SSF48452	TPR-like
VAA_02913	SSF53167	Purine and uridine phosphorylases
VAA_02915	SSF46955	Putative DNA-binding domain
VAA_02916	SSF48173	Cryptochrome/photolyase FAD-binding domain
VAA_02916	SSF52425	Cryptochrome/photolyase, N-terminal domain
VAA_02917	SSF141523	L,D-transpeptidase catalytic domain-like
VAA_02917	SSF54106	LysM domain
VAA_02918	SSF58042	Outer membrane lipoprotein
VAA_02919	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_02920	SSF53474	alpha/beta-Hydrolases
VAA_02922	SSF56935	Porins
VAA_02923	SSF49785	Galactose-binding domain-like
VAA_02923	SSF55486	Metalloproteases ("zincins"), catalytic domain
VAA_02927	SSF53649	Alkaline phosphatase-like
VAA_02928	SSF51419	PLP-binding barrel
VAA_02931	SSF51556	Metallo-dependent hydrolases
VAA_02932	SSF63520	PTS-regulatory domain, PRD
VAA_02933	SSF53850	Periplasmic binding protein-like II
VAA_02936	SSF56935	Porins
VAA_02937	SSF51445	(Trans)glycosidases
VAA_02939	SSF51430	NAD(P)-linked oxidoreductase
VAA_02942	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_02946	SSF103473	MFS general substrate transporter
VAA_02946	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
VAA_02947	SSF52172	CheY-like
VAA_02948	SSF141868	EAL domain-like
VAA_02949	SSF51120	beta-Roll
VAA_02951	SSF55729	Acyl-CoA N-acyltransferases (Nat)
VAA_02952	SSF109604	HD-domain/PDEase-like
VAA_02952	SSF52172	CheY-like
VAA_02953	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
VAA_02953	SSF47384	Homodimeric domain of signal transducing histidine kinase
VAA_02953	SSF52172	CheY-like
VAA_02953	SSF55781	GAF domain-like
VAA_02953	SSF55785	PYP-like sensor domain (PAS domain)
VAA_02953	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
VAA_02954	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
VAA_02959	SSF56821	Prismane protein-like
VAA_02960	SSF51735	NAD(P)-binding Rossmann-fold domains
VAA_02960	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
VAA_02961	SSF47384	Homodimeric domain of signal transducing histidine kinase
VAA_02961	SSF52172	CheY-like
VAA_02961	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
VAA_02963	SSF56954	Outer membrane efflux proteins (OEP)
VAA_02964	SSF111369	HlyD-like secretion proteins
VAA_02965	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
VAA_02965	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
VAA_02965	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
VAA_02966	SSF49503	Cupredoxins
VAA_02967	SSF53927	Cytidine deaminase-like
VAA_02968	SSF51735	NAD(P)-binding Rossmann-fold domains
VAA_02968	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
VAA_02969	SSF82784	OsmC-like
VAA_02970	SSF51161	Trimeric LpxA-like enzymes
VAA_02971	SSF103481	Multidrug resistance efflux transporter EmrE
VAA_02972	SSF161111	Cation efflux protein transmembrane domain-like
VAA_02973	SSF46785	"Winged helix" DNA-binding domain
VAA_02973	SSF53850	Periplasmic binding protein-like II
VAA_02974	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
VAA_02975	SSF46785	"Winged helix" DNA-binding domain
VAA_02975	SSF53850	Periplasmic binding protein-like II
VAA_02976	SSF56801	Acetyl-CoA synthetase-like
VAA_02977	SSF56534	Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
VAA_02978	SSF55248	PCD-like
VAA_02980	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
VAA_02982	SSF46689	Homeodomain-like
VAA_02982	SSF51215	Regulatory protein AraC
VAA_02984	SSF109604	HD-domain/PDEase-like
VAA_02984	SSF52172	CheY-like
VAA_02985	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
VAA_02987	SSF103473	MFS general substrate transporter
VAA_02988	SSF53067	Actin-like ATPase domain
VAA_02989	SSF103481	Multidrug resistance efflux transporter EmrE
VAA_02990	SSF46785	"Winged helix" DNA-binding domain
VAA_02990	SSF54909	Dimeric alpha+beta barrel
VAA_02991	SSF52266	SGNH hydrolase
VAA_02992	SSF50370	Ricin B-like lectins
VAA_02992	SSF56959	Leukocidin-like
VAA_02993	SSF53474	alpha/beta-Hydrolases
VAA_02994	SSF158855	Lipase chaperone-like
VAA_02997	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
VAA_03000	SSF53807	"Helical backbone" metal receptor
VAA_03001	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
VAA_03002	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
VAA_03003	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_03004	SSF53067	Actin-like ATPase domain
VAA_03005	SSF52374	Nucleotidylyl transferase
VAA_03005	SSF55174	Alpha-L RNA-binding motif
VAA_03006	SSF46894	C-terminal effector domain of the bipartite response regulators
VAA_03007	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_03008	SSF55073	Nucleotide cyclase
VAA_04004	SSF56112	Protein kinase-like (PK-like)
VAA_04087	SSF53098	Ribonuclease H-like
VAA_04288	SSF46894	C-terminal effector domain of the bipartite response regulators
VAA_04288	SSF52172	CheY-like
VAA_04289	SSF47384	Homodimeric domain of signal transducing histidine kinase
VAA_04289	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
VAA_04290	SSF52467	DHS-like NAD/FAD-binding domain
VAA_04291	SSF51735	NAD(P)-binding Rossmann-fold domains
VAA_04291	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
VAA_04294	SSF55073	Nucleotide cyclase
VAA_04295	SSF50249	Nucleic acid-binding proteins
VAA_04296	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
VAA_04299	SSF55174	Alpha-L RNA-binding motif
VAA_04300	SSF47616	GST C-terminal domain-like
VAA_04300	SSF52833	Thioredoxin-like
VAA_04301	SSF47616	GST C-terminal domain-like
VAA_04301	SSF52833	Thioredoxin-like
VAA_04302	SSF46689	Homeodomain-like
VAA_04302	SSF48498	Tetracyclin repressor-like, C-terminal domain
VAA_04303	SSF117856	AF0104/ALDC/Ptd012-like
VAA_04304	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_04305	SSF53850	Periplasmic binding protein-like II
VAA_04307	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
VAA_04309	SSF82057	Prokaryotic SH3-related domain
VAA_04312	SSF47413	lambda repressor-like DNA-binding domains
VAA_04312	SSF53822	Periplasmic binding protein-like I
VAA_04313	SSF53613	Ribokinase-like
VAA_04314	SSF53822	Periplasmic binding protein-like I
VAA_04316	SSF52540	P-loop containing nucleoside triphosphate hydrolases
VAA_04317	SSF102546	RbsD-like
VAA_04322	SSF55120	Pseudouridine synthase