XAC0043	PWY-6655	xanthan biosynthesis
XAC0043	PWY-6658	acetan biosynthesis
XAC0044	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
XAC0124	PWY-5484	glycolysis II (from fructose 6-phosphate)
XAC0125	PWY-5913	TCA cycle VI (obligate autotrophs)
XAC0125	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
XAC0125	PWY-6638	sulfolactate degradation III
XAC0125	PWY-6642	(<i>R</i>)-cysteate degradation
XAC0125	PWY-6643	coenzyme M biosynthesis II
XAC0125	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
XAC0125	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
XAC0125	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
XAC0155	PWY-2622	trehalose biosynthesis IV
XAC0156	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
XAC0156	PWY-622	starch biosynthesis
XAC0168	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
XAC0169	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
XAC0174	PWY-6134	L-tyrosine biosynthesis IV
XAC0174	PWY-7158	L-phenylalanine degradation V
XAC0204	PWY-381	nitrate reduction II (assimilatory)
XAC0204	PWY-5675	nitrate reduction V (assimilatory)
XAC0204	PWY-6549	L-glutamine biosynthesis III
XAC0204	PWY-6963	ammonia assimilation cycle I
XAC0204	PWY-6964	ammonia assimilation cycle II
XAC0209	PWY-6854	ethylene biosynthesis III (microbes)
XAC0210	PWY-6854	ethylene biosynthesis III (microbes)
XAC0216	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
XAC0216	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
XAC0222	PWY-5667	CDP-diacylglycerol biosynthesis I
XAC0222	PWY-5981	CDP-diacylglycerol biosynthesis III
XAC0233	PWY-4381	fatty acid biosynthesis initiation I
XAC0240	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
XAC0240	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
XAC0256	PWY-6728	methylaspartate cycle
XAC0256	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XAC0256	PWY-7118	chitin degradation to ethanol
XAC0256	PWY-7294	xylose degradation IV
XAC0256	PWY-7295	L-arabinose degradation IV
XAC0257	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XAC0264	PWY-4381	fatty acid biosynthesis initiation I
XAC0264	PWY-5743	3-hydroxypropanoate cycle
XAC0264	PWY-5744	glyoxylate assimilation
XAC0264	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
XAC0264	PWY-6679	jadomycin biosynthesis
XAC0264	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
XAC0295	PWY-5691	urate degradation to allantoin I
XAC0295	PWY-7394	urate degradation to allantoin II
XAC0297	PWY-5691	urate degradation to allantoin I
XAC0297	PWY-7394	urate degradation to allantoin II
XAC0300	PWY-6832	2-aminoethylphosphonate degradation II
XAC0305	PWY-4041	&gamma;-glutamyl cycle
XAC0305	PWY-5826	hypoglycin biosynthesis
XAC0306	PWY-5169	cyanurate degradation
XAC0306	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
XAC0324	PWY-2201	folate transformations I
XAC0324	PWY-5497	purine nucleobases degradation II (anaerobic)
XAC0331	PWY-2201	folate transformations I
XAC0331	PWY-3841	folate transformations II
XAC0336	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
XAC0336	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
XAC0336	PWY-6936	seleno-amino acid biosynthesis
XAC0336	PWY-702	L-methionine biosynthesis II
XAC0345	PWY-5101	L-isoleucine biosynthesis II
XAC0345	PWY-5103	L-isoleucine biosynthesis III
XAC0345	PWY-5104	L-isoleucine biosynthesis IV
XAC0345	PWY-7111	pyruvate fermentation to isobutanol (engineered)
XAC0356	PWY-6215	4-chlorobenzoate degradation
XAC0358	PWY-4261	glycerol degradation I
XAC0360	PWY-4261	glycerol degradation I
XAC0360	PWY-6118	glycerol-3-phosphate shuttle
XAC0360	PWY-6952	glycerophosphodiester degradation
XAC0366	PWY-1361	benzoyl-CoA degradation I (aerobic)
XAC0366	PWY-2361	3-oxoadipate degradation
XAC0366	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
XAC0369	PWY-6123	inosine-5'-phosphate biosynthesis I
XAC0369	PWY-6124	inosine-5'-phosphate biosynthesis II
XAC0369	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
XAC0369	PWY-7234	inosine-5'-phosphate biosynthesis III
XAC0370	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
XAC0383	PWY-6519	8-amino-7-oxononanoate biosynthesis I
XAC0385	PWY-6519	8-amino-7-oxononanoate biosynthesis I
XAC0387	PWY-6519	8-amino-7-oxononanoate biosynthesis I
XAC0387	PWY-6578	8-amino-7-oxononanoate biosynthesis III
XAC0387	PWY-7147	8-amino-7-oxononanoate biosynthesis II
XAC0388	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
XAC0412	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
XAC0425	PWY-622	starch biosynthesis
XAC0426	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
XAC0426	PWY-622	starch biosynthesis
XAC0427	PWY-2661	trehalose biosynthesis V
XAC0428	PWY-5941	glycogen degradation II (eukaryotic)
XAC0428	PWY-6724	starch degradation II
XAC0428	PWY-6737	starch degradation V
XAC0428	PWY-7238	sucrose biosynthesis II
XAC0429	PWY-2661	trehalose biosynthesis V
XAC0466	PWY-6902	chitin degradation II
XAC0470	PWY-6123	inosine-5'-phosphate biosynthesis I
XAC0470	PWY-6124	inosine-5'-phosphate biosynthesis II
XAC0470	PWY-7234	inosine-5'-phosphate biosynthesis III
XAC0472	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
XAC0472	PWY-5723	Rubisco shunt
XAC0476	PWY-5958	acridone alkaloid biosynthesis
XAC0476	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
XAC0476	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
XAC0478	PWY-5958	acridone alkaloid biosynthesis
XAC0478	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
XAC0478	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
XAC0484	PWY-6834	spermidine biosynthesis III
XAC0501	PWY-6857	retinol biosynthesis
XAC0503	PWY-5381	pyridine nucleotide cycling (plants)
XAC0511	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
XAC0511	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
XAC0511	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
XAC0513	PWY-6123	inosine-5'-phosphate biosynthesis I
XAC0513	PWY-6124	inosine-5'-phosphate biosynthesis II
XAC0513	PWY-7234	inosine-5'-phosphate biosynthesis III
XAC0533	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
XAC0533	PWY-6416	quinate degradation II
XAC0533	PWY-6707	gallate biosynthesis
XAC0545	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
XAC0545	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
XAC0545	PWY-6164	3-dehydroquinate biosynthesis I
XAC0560	PWY-5794	malonate degradation I (biotin-independent)
XAC0560	PWY-6060	malonate degradation II (biotin-dependent)
XAC0562	PWY-4381	fatty acid biosynthesis initiation I
XAC0562	PWY-5743	3-hydroxypropanoate cycle
XAC0562	PWY-5744	glyoxylate assimilation
XAC0562	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
XAC0562	PWY-6060	malonate degradation II (biotin-dependent)
XAC0562	PWY-6679	jadomycin biosynthesis
XAC0562	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
XAC0563	PWY-6060	malonate degradation II (biotin-dependent)
XAC0564	PWY-5796	malonate decarboxylase activation
XAC0565	PWY-5796	malonate decarboxylase activation
XAC0576	PWY-6891	thiazole biosynthesis II (Bacillus)
XAC0576	PWY-6892	thiazole biosynthesis I (E. coli)
XAC0576	PWY-7560	methylerythritol phosphate pathway II
XAC0585	PWY-4061	glutathione-mediated detoxification I
XAC0585	PWY-6842	glutathione-mediated detoxification II
XAC0585	PWY-7112	4-hydroxy-2-nonenal detoxification
XAC0585	PWY-7533	gliotoxin biosynthesis
XAC0622	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
XAC0622	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
XAC0634	PWY-2941	L-lysine biosynthesis II
XAC0634	PWY-5097	L-lysine biosynthesis VI
XAC0643	PWY-5839	menaquinol-7 biosynthesis
XAC0643	PWY-5844	menaquinol-9 biosynthesis
XAC0643	PWY-5849	menaquinol-6 biosynthesis
XAC0643	PWY-5890	menaquinol-10 biosynthesis
XAC0643	PWY-5891	menaquinol-11 biosynthesis
XAC0643	PWY-5892	menaquinol-12 biosynthesis
XAC0643	PWY-5895	menaquinol-13 biosynthesis
XAC0652	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
XAC0652	PWY-3162	L-tryptophan degradation V (side chain pathway)
XAC0652	PWY-5057	L-valine degradation II
XAC0652	PWY-5076	L-leucine degradation III
XAC0652	PWY-5078	L-isoleucine degradation II
XAC0652	PWY-5079	L-phenylalanine degradation III
XAC0652	PWY-5082	L-methionine degradation III
XAC0652	PWY-5480	pyruvate fermentation to ethanol I
XAC0652	PWY-5486	pyruvate fermentation to ethanol II
XAC0652	PWY-5751	phenylethanol biosynthesis
XAC0652	PWY-6028	acetoin degradation
XAC0652	PWY-6313	serotonin degradation
XAC0652	PWY-6333	acetaldehyde biosynthesis I
XAC0652	PWY-6342	noradrenaline and adrenaline degradation
XAC0652	PWY-6587	pyruvate fermentation to ethanol III
XAC0652	PWY-6802	salidroside biosynthesis
XAC0652	PWY-6871	3-methylbutanol biosynthesis
XAC0652	PWY-7013	L-1,2-propanediol degradation
XAC0652	PWY-7111	pyruvate fermentation to isobutanol (engineered)
XAC0652	PWY-7118	chitin degradation to ethanol
XAC0652	PWY-7396	butanol and isobutanol biosynthesis (engineered)
XAC0652	PWY-7557	dehydrodiconiferyl alcohol degradation
XAC0664	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
XAC0664	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
XAC0667	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
XAC0667	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
XAC0668	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
XAC0668	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
XAC0668	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
XAC0674	PWY-5381	pyridine nucleotide cycling (plants)
XAC0686	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
XAC0686	PWY-6148	tetrahydromethanopterin biosynthesis
XAC0686	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
XAC0686	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
XAC0708	PWY-6807	xyloglucan degradation II (exoglucanase)
XAC0715	PWY-6906	chitin derivatives degradation
XAC0715	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
XAC0715	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
XAC0718	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
XAC0718	PWY-7494	choline degradation IV
XAC0719	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
XAC0719	PWY-7494	choline degradation IV
XAC0728	PWY-6840	homoglutathione biosynthesis
XAC0728	PWY-7255	ergothioneine biosynthesis I (bacteria)
XAC0734	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
XAC0734	PWY-3162	L-tryptophan degradation V (side chain pathway)
XAC0734	PWY-5057	L-valine degradation II
XAC0734	PWY-5076	L-leucine degradation III
XAC0734	PWY-5078	L-isoleucine degradation II
XAC0734	PWY-5079	L-phenylalanine degradation III
XAC0734	PWY-5082	L-methionine degradation III
XAC0734	PWY-5480	pyruvate fermentation to ethanol I
XAC0734	PWY-5486	pyruvate fermentation to ethanol II
XAC0734	PWY-5751	phenylethanol biosynthesis
XAC0734	PWY-6028	acetoin degradation
XAC0734	PWY-6313	serotonin degradation
XAC0734	PWY-6333	acetaldehyde biosynthesis I
XAC0734	PWY-6342	noradrenaline and adrenaline degradation
XAC0734	PWY-6587	pyruvate fermentation to ethanol III
XAC0734	PWY-6802	salidroside biosynthesis
XAC0734	PWY-6871	3-methylbutanol biosynthesis
XAC0734	PWY-7013	L-1,2-propanediol degradation
XAC0734	PWY-7111	pyruvate fermentation to isobutanol (engineered)
XAC0734	PWY-7118	chitin degradation to ethanol
XAC0734	PWY-7396	butanol and isobutanol biosynthesis (engineered)
XAC0734	PWY-7557	dehydrodiconiferyl alcohol degradation
XAC0735	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
XAC0736	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
XAC0743	PWY-1622	formaldehyde assimilation I (serine pathway)
XAC0743	PWY-181	photorespiration
XAC0743	PWY-2161	folate polyglutamylation
XAC0743	PWY-2201	folate transformations I
XAC0743	PWY-3661	glycine betaine degradation I
XAC0743	PWY-3661-1	glycine betaine degradation II (mammalian)
XAC0743	PWY-3841	folate transformations II
XAC0743	PWY-5497	purine nucleobases degradation II (anaerobic)
XAC0748	PWY-6167	flavin biosynthesis II (archaea)
XAC0748	PWY-6168	flavin biosynthesis III (fungi)
XAC0748	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
XAC0749	PWY-6167	flavin biosynthesis II (archaea)
XAC0749	PWY-6168	flavin biosynthesis III (fungi)
XAC0749	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
XAC0750	PWY-6167	flavin biosynthesis II (archaea)
XAC0750	PWY-6168	flavin biosynthesis III (fungi)
XAC0752	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
XAC0752	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
XAC0752	PWY-6896	thiamin salvage I
XAC0752	PWY-6897	thiamin salvage II
XAC0762	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
XAC0762	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
XAC0776	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
XAC0776	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
XAC0777	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
XAC0777	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
XAC0777	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
XAC0779	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
XAC0779	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
XAC0779	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
XAC0779	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
XAC0780	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
XAC0780	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
XAC0781	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
XAC0781	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
XAC0789	PWY-6502	oxidized GTP and dGTP detoxification
XAC0789	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
XAC0789	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
XAC0789	PWY-6897	thiamin salvage II
XAC0789	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
XAC0789	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
XAC0789	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
XAC0789	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
XAC0791	PWY-2201	folate transformations I
XAC0791	PWY-3841	folate transformations II
XAC0798	PWY-842	starch degradation I
XAC0804	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
XAC0806	PWY-1622	formaldehyde assimilation I (serine pathway)
XAC0806	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
XAC0806	PWY-5913	TCA cycle VI (obligate autotrophs)
XAC0806	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XAC0806	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
XAC0806	PWY-6549	L-glutamine biosynthesis III
XAC0806	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
XAC0806	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
XAC0806	PWY-7124	ethylene biosynthesis V (engineered)
XAC0813	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
XAC0813	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
XAC0837	PWY-7039	phosphatidate metabolism, as a signaling molecule
XAC0842	PWY-3841	folate transformations II
XAC0842	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
XAC0842	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
XAC0842	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
XAC0842	PWY-7199	pyrimidine deoxyribonucleosides salvage
XAC0842	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
XAC0844	PWY-3841	folate transformations II
XAC0844	PWY-6614	tetrahydrofolate biosynthesis
XAC0870	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
XAC0870	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
XAC0870	PWY-6268	adenosylcobalamin salvage from cobalamin
XAC0870	PWY-6269	adenosylcobalamin salvage from cobinamide II
XAC0888	PWY-5530	sorbitol biosynthesis II
XAC0893	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
XAC0899	PWY-2582	brassinosteroid biosynthesis II
XAC0899	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
XAC0899	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
XAC0899	PWY-6948	sitosterol degradation to androstenedione
XAC0899	PWY-699	brassinosteroid biosynthesis I
XAC0899	PWY-7299	progesterone biosynthesis
XAC0902	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
XAC0902	PWY-5723	Rubisco shunt
XAC0927	PWY-5057	L-valine degradation II
XAC0927	PWY-5076	L-leucine degradation III
XAC0927	PWY-5078	L-isoleucine degradation II
XAC0927	PWY-5101	L-isoleucine biosynthesis II
XAC0927	PWY-5103	L-isoleucine biosynthesis III
XAC0927	PWY-5104	L-isoleucine biosynthesis IV
XAC0927	PWY-5108	L-isoleucine biosynthesis V
XAC0936	PWY-6785	hydrogen production VIII
XAC0945	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
XAC0948	PWY-7560	methylerythritol phosphate pathway II
XAC1000	PWY-6164	3-dehydroquinate biosynthesis I
XAC1002	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
XAC1006	PWY-1622	formaldehyde assimilation I (serine pathway)
XAC1006	PWY-5392	reductive TCA cycle II
XAC1006	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
XAC1006	PWY-5690	TCA cycle II (plants and fungi)
XAC1006	PWY-5913	TCA cycle VI (obligate autotrophs)
XAC1006	PWY-6728	methylaspartate cycle
XAC1006	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XAC1006	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
XAC1006	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
XAC1022	PWY-7378	aminopropanol phosphate biosynthesis II
XAC1029	PWY-2161	folate polyglutamylation
XAC1032	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
XAC1032	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
XAC1032	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
XAC1032	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
XAC1087	PWY-5386	methylglyoxal degradation I
XAC1097	PWY-6823	molybdenum cofactor biosynthesis
XAC1100	PWY-6823	molybdenum cofactor biosynthesis
XAC1123	PWY-4381	fatty acid biosynthesis initiation I
XAC1126	PWY-4381	fatty acid biosynthesis initiation I
XAC1126	PWY-6799	fatty acid biosynthesis (plant mitochondria)
XAC1126	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
XAC1127	PWY-5367	petroselinate biosynthesis
XAC1127	PWY-5971	palmitate biosynthesis II (bacteria and plants)
XAC1127	PWY-5973	<i>cis</i>-vaccenate biosynthesis
XAC1127	PWY-5989	stearate biosynthesis II (bacteria and plants)
XAC1127	PWY-5994	palmitate biosynthesis I (animals and fungi)
XAC1127	PWY-6113	superpathway of mycolate biosynthesis
XAC1127	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
XAC1127	PWY-6519	8-amino-7-oxononanoate biosynthesis I
XAC1127	PWY-6951	XAC1127
XAC1127	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
XAC1127	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
XAC1127	PWYG-321	mycolate biosynthesis
XAC1130	PWY-5958	acridone alkaloid biosynthesis
XAC1130	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
XAC1130	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
XAC1137	PWY-5747	2-methylcitrate cycle II
XAC1158	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
XAC1211	PWY-5506	methanol oxidation to formaldehyde IV
XAC1253	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
XAC1253	PWY-6167	flavin biosynthesis II (archaea)
XAC1253	PWY-6168	flavin biosynthesis III (fungi)
XAC1256	PWY-7560	methylerythritol phosphate pathway II
XAC1259	PWY-3781	aerobic respiration I (cytochrome c)
XAC1259	PWY-4521	arsenite oxidation I (respiratory)
XAC1259	PWY-6692	Fe(II) oxidation
XAC1259	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
XAC1259	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
XAC1287	PWY-2723	trehalose degradation V
XAC1287	PWY-6317	galactose degradation I (Leloir pathway)
XAC1287	PWY-6737	starch degradation V
XAC1290	PWY-723	alkylnitronates degradation
XAC1294	PWY-6829	tRNA methylation (yeast)
XAC1294	PWY-7285	methylwyosine biosynthesis
XAC1294	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
XAC1308	PWY-6807	xyloglucan degradation II (exoglucanase)
XAC1312	PWY-5642	2,4-dinitrotoluene degradation
XAC1312	PWY-6373	acrylate degradation
XAC1318	PWY-1361	benzoyl-CoA degradation I (aerobic)
XAC1318	PWY-5109	2-methylbutanoate biosynthesis
XAC1318	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
XAC1318	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
XAC1318	PWY-5177	glutaryl-CoA degradation
XAC1318	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
XAC1318	PWY-6435	4-hydroxybenzoate biosynthesis V
XAC1318	PWY-6583	pyruvate fermentation to butanol I
XAC1318	PWY-6863	pyruvate fermentation to hexanol
XAC1318	PWY-6883	pyruvate fermentation to butanol II
XAC1318	PWY-6944	androstenedione degradation
XAC1318	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
XAC1318	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
XAC1318	PWY-7007	methyl ketone biosynthesis
XAC1318	PWY-7046	4-coumarate degradation (anaerobic)
XAC1318	PWY-7094	fatty acid salvage
XAC1318	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
XAC1318	PWY-735	jasmonic acid biosynthesis
XAC1318	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
XAC1334	PWY-6902	chitin degradation II
XAC1405	PWY-4381	fatty acid biosynthesis initiation I
XAC1405	PWY-5743	3-hydroxypropanoate cycle
XAC1405	PWY-5744	glyoxylate assimilation
XAC1405	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
XAC1405	PWY-6679	jadomycin biosynthesis
XAC1405	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
XAC1410	PWY-5971	palmitate biosynthesis II (bacteria and plants)
XAC1410	PWY-5973	<i>cis</i>-vaccenate biosynthesis
XAC1410	PWY-5989	stearate biosynthesis II (bacteria and plants)
XAC1410	PWY-5994	palmitate biosynthesis I (animals and fungi)
XAC1410	PWY-6113	superpathway of mycolate biosynthesis
XAC1410	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
XAC1410	PWY-6519	8-amino-7-oxononanoate biosynthesis I
XAC1410	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
XAC1410	PWYG-321	mycolate biosynthesis
XAC1415	PWY-7560	methylerythritol phosphate pathway II
XAC1460	PWY-5392	reductive TCA cycle II
XAC1460	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
XAC1460	PWY-5690	TCA cycle II (plants and fungi)
XAC1460	PWY-5913	TCA cycle VI (obligate autotrophs)
XAC1460	PWY-6728	methylaspartate cycle
XAC1460	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XAC1460	PWY-7254	TCA cycle VII (acetate-producers)
XAC1460	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
XAC1462	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
XAC1462	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XAC1462	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
XAC1462	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
XAC1463	PWY-6803	phosphatidylcholine acyl editing
XAC1463	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
XAC1463	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
XAC1463	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
XAC1524	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
XAC1524	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
XAC1533	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
XAC1533	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
XAC1534	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
XAC1535	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
XAC1539	PWY-6123	inosine-5'-phosphate biosynthesis I
XAC1539	PWY-6124	inosine-5'-phosphate biosynthesis II
XAC1539	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
XAC1539	PWY-7234	inosine-5'-phosphate biosynthesis III
XAC1542	PWY-5392	reductive TCA cycle II
XAC1542	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
XAC1542	PWY-5690	TCA cycle II (plants and fungi)
XAC1542	PWY-5913	TCA cycle VI (obligate autotrophs)
XAC1542	PWY-6728	methylaspartate cycle
XAC1542	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XAC1542	PWY-7254	TCA cycle VII (acetate-producers)
XAC1542	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
XAC1551	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
XAC1559	PWY-2201	folate transformations I
XAC1559	PWY-3841	folate transformations II
XAC1568	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
XAC1580	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
XAC1580	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XAC1580	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
XAC1580	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
XAC1595	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
XAC1595	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
XAC1595	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
XAC1596	PWY-5381	pyridine nucleotide cycling (plants)
XAC1596	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
XAC1596	PWY-6596	adenosine nucleotides degradation I
XAC1596	PWY-6606	guanosine nucleotides degradation II
XAC1596	PWY-6607	guanosine nucleotides degradation I
XAC1596	PWY-6608	guanosine nucleotides degradation III
XAC1596	PWY-7185	UTP and CTP dephosphorylation I
XAC1600	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
XAC1600	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
XAC1601	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
XAC1601	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
XAC1603	PWY-5647	2-nitrobenzoate degradation I
XAC1603	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
XAC1603	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
XAC1603	PWY-6505	L-tryptophan degradation XII (Geobacillus)
XAC1604	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
XAC1604	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XAC1604	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
XAC1604	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
XAC1630	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
XAC1630	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
XAC1635	PWY-5028	L-histidine degradation II
XAC1635	PWY-5030	L-histidine degradation III
XAC1637	PWY-5028	L-histidine degradation II
XAC1637	PWY-5030	L-histidine degradation III
XAC1638	PWY-5028	L-histidine degradation II
XAC1638	PWY-5030	L-histidine degradation III
XAC1649	PWY-3461	L-tyrosine biosynthesis II
XAC1649	PWY-3462	L-phenylalanine biosynthesis II
XAC1649	PWY-6120	L-tyrosine biosynthesis III
XAC1649	PWY-6627	salinosporamide A biosynthesis
XAC1649	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
XAC1650	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
XAC1653	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
XAC1707	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
XAC1707	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
XAC1716	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
XAC1716	PWY-7177	UTP and CTP dephosphorylation II
XAC1716	PWY-7185	UTP and CTP dephosphorylation I
XAC1717	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
XAC1717	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
XAC1719	PWY-1042	glycolysis IV (plant cytosol)
XAC1719	PWY-1622	formaldehyde assimilation I (serine pathway)
XAC1719	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
XAC1719	PWY-5484	glycolysis II (from fructose 6-phosphate)
XAC1719	PWY-5723	Rubisco shunt
XAC1719	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XAC1719	PWY-6886	1-butanol autotrophic biosynthesis
XAC1719	PWY-6901	superpathway of glucose and xylose degradation
XAC1719	PWY-7003	glycerol degradation to butanol
XAC1719	PWY-7124	ethylene biosynthesis V (engineered)
XAC1719	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
XAC1721	PWY-7560	methylerythritol phosphate pathway II
XAC1722	PWY-7560	methylerythritol phosphate pathway II
XAC1725	PWY-5381	pyridine nucleotide cycling (plants)
XAC1725	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
XAC1725	PWY-6596	adenosine nucleotides degradation I
XAC1725	PWY-6606	guanosine nucleotides degradation II
XAC1725	PWY-6607	guanosine nucleotides degradation I
XAC1725	PWY-6608	guanosine nucleotides degradation III
XAC1725	PWY-7185	UTP and CTP dephosphorylation I
XAC1733	PWY-6614	tetrahydrofolate biosynthesis
XAC1734	PWY-2781	<i>cis</i>-zeatin biosynthesis
XAC1753	PWY-6910	hydroxymethylpyrimidine salvage
XAC1753	PWY-7356	thiamin salvage IV (yeast)
XAC1753	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
XAC1760	PWY-2941	L-lysine biosynthesis II
XAC1760	PWY-2942	L-lysine biosynthesis III
XAC1760	PWY-5097	L-lysine biosynthesis VI
XAC1763	PWY-7130	L-glucose degradation
XAC1766	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
XAC1766	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
XAC1766	PWY-7242	D-fructuronate degradation
XAC1766	PWY-7310	D-glucosaminate degradation
XAC1772	PWY-6807	xyloglucan degradation II (exoglucanase)
XAC1775	PWY-4261	glycerol degradation I
XAC1781	PWY-5663	tetrahydrobiopterin biosynthesis I
XAC1781	PWY-5664	tetrahydrobiopterin biosynthesis II
XAC1781	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
XAC1781	PWY-6703	preQ<sub>0</sub> biosynthesis
XAC1781	PWY-6983	tetrahydrobiopterin biosynthesis III
XAC1781	PWY-7442	drosopterin and aurodrosopterin biosynthesis
XAC1784	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
XAC1784	PWY-6148	tetrahydromethanopterin biosynthesis
XAC1784	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
XAC1784	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
XAC1785	PWY-6654	phosphopantothenate biosynthesis III
XAC1787	PWY-5155	&beta;-alanine biosynthesis III
XAC1788	PWY-3801	sucrose degradation II (sucrose synthase)
XAC1788	PWY-5054	sorbitol biosynthesis I
XAC1788	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
XAC1788	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
XAC1788	PWY-5659	GDP-mannose biosynthesis
XAC1788	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XAC1788	PWY-621	sucrose degradation III (sucrose invertase)
XAC1788	PWY-622	starch biosynthesis
XAC1788	PWY-6531	mannitol cycle
XAC1788	PWY-6981	chitin biosynthesis
XAC1788	PWY-7238	sucrose biosynthesis II
XAC1788	PWY-7347	sucrose biosynthesis III
XAC1788	PWY-7385	1,3-propanediol biosynthesis (engineered)
XAC1799	PWY-7560	methylerythritol phosphate pathway II
XAC1802	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
XAC1802	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
XAC1804	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
XAC1804	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
XAC1805	PWY-5686	UMP biosynthesis
XAC1820	PWY-2941	L-lysine biosynthesis II
XAC1820	PWY-2942	L-lysine biosynthesis III
XAC1820	PWY-5097	L-lysine biosynthesis VI
XAC1820	PWY-6559	spermidine biosynthesis II
XAC1820	PWY-6562	norspermidine biosynthesis
XAC1820	PWY-7153	grixazone biosynthesis
XAC1821	PWY-702	L-methionine biosynthesis II
XAC1839	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
XAC1839	PWY-5389	3-methylthiopropanoate biosynthesis
XAC1840	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
XAC1845	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
XAC1845	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
XAC1860	PWY-2941	L-lysine biosynthesis II
XAC1860	PWY-2942	L-lysine biosynthesis III
XAC1860	PWY-5097	L-lysine biosynthesis VI
XAC1861	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
XAC1861	PWY-5686	UMP biosynthesis
XAC1861	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
XAC1862	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
XAC1862	PWY-5686	UMP biosynthesis
XAC1862	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
XAC1885	PWY-5747	2-methylcitrate cycle II
XAC1927	PWY-6823	molybdenum cofactor biosynthesis
XAC1951	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
XAC1964	PWY-4381	fatty acid biosynthesis initiation I
XAC2013	PWY-1361	benzoyl-CoA degradation I (aerobic)
XAC2013	PWY-5109	2-methylbutanoate biosynthesis
XAC2013	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
XAC2013	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
XAC2013	PWY-5177	glutaryl-CoA degradation
XAC2013	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
XAC2013	PWY-6435	4-hydroxybenzoate biosynthesis V
XAC2013	PWY-6583	pyruvate fermentation to butanol I
XAC2013	PWY-6863	pyruvate fermentation to hexanol
XAC2013	PWY-6883	pyruvate fermentation to butanol II
XAC2013	PWY-6944	androstenedione degradation
XAC2013	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
XAC2013	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
XAC2013	PWY-7007	methyl ketone biosynthesis
XAC2013	PWY-7046	4-coumarate degradation (anaerobic)
XAC2013	PWY-7094	fatty acid salvage
XAC2013	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
XAC2013	PWY-735	jasmonic acid biosynthesis
XAC2013	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
XAC2015	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
XAC2015	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
XAC2015	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
XAC2015	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
XAC2015	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
XAC2015	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
XAC2015	PWY-7205	CMP phosphorylation
XAC2015	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
XAC2015	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
XAC2015	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
XAC2015	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
XAC2015	PWY-7224	purine deoxyribonucleosides salvage
XAC2015	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
XAC2015	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
XAC2022	PWY-6823	molybdenum cofactor biosynthesis
XAC2032	PWY-6823	molybdenum cofactor biosynthesis
XAC2033	PWY-5964	guanylyl molybdenum cofactor biosynthesis
XAC2041	PWY-5484	glycolysis II (from fructose 6-phosphate)
XAC2044	PWY-6502	oxidized GTP and dGTP detoxification
XAC2067	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
XAC2067	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
XAC2067	PWY-7242	D-fructuronate degradation
XAC2067	PWY-7310	D-glucosaminate degradation
XAC2068	PWY-5101	L-isoleucine biosynthesis II
XAC2068	PWY-5103	L-isoleucine biosynthesis III
XAC2068	PWY-5104	L-isoleucine biosynthesis IV
XAC2068	PWY-7111	pyruvate fermentation to isobutanol (engineered)
XAC2069	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
XAC2069	PWY-6855	chitin degradation I (archaea)
XAC2069	PWY-6906	chitin derivatives degradation
XAC2070	PWY-2723	trehalose degradation V
XAC2070	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
XAC2070	PWY-5661	GDP-glucose biosynthesis
XAC2070	PWY-7238	sucrose biosynthesis II
XAC2070	PWY-7385	1,3-propanediol biosynthesis (engineered)
XAC2071	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
XAC2077	PWY-3781	aerobic respiration I (cytochrome c)
XAC2077	PWY-4302	aerobic respiration III (alternative oxidase pathway)
XAC2077	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
XAC2077	PWY-5690	TCA cycle II (plants and fungi)
XAC2077	PWY-6728	methylaspartate cycle
XAC2077	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XAC2077	PWY-7254	TCA cycle VII (acetate-producers)
XAC2077	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
XAC2078	PWY-3781	aerobic respiration I (cytochrome c)
XAC2078	PWY-4302	aerobic respiration III (alternative oxidase pathway)
XAC2078	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
XAC2078	PWY-5690	TCA cycle II (plants and fungi)
XAC2078	PWY-6728	methylaspartate cycle
XAC2078	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XAC2078	PWY-7254	TCA cycle VII (acetate-producers)
XAC2078	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
XAC2089	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
XAC2089	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
XAC2093	PWY-5269	cardiolipin biosynthesis II
XAC2093	PWY-5668	cardiolipin biosynthesis I
XAC2116	PWY-7158	L-phenylalanine degradation V
XAC2127	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
XAC2159	PWY-5194	siroheme biosynthesis
XAC2159	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
XAC2287	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
XAC2288	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
XAC2288	PWY-6596	adenosine nucleotides degradation I
XAC2288	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
XAC2289	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
XAC2289	PWY-2201	folate transformations I
XAC2289	PWY-3841	folate transformations II
XAC2289	PWY-5030	L-histidine degradation III
XAC2289	PWY-5497	purine nucleobases degradation II (anaerobic)
XAC2289	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
XAC2292	PWY-3801	sucrose degradation II (sucrose synthase)
XAC2292	PWY-6527	stachyose degradation
XAC2292	PWY-6981	chitin biosynthesis
XAC2292	PWY-7238	sucrose biosynthesis II
XAC2292	PWY-7343	UDP-glucose biosynthesis
XAC2294	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
XAC2294	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
XAC2294	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
XAC2299	PWY-7205	CMP phosphorylation
XAC2302	PWY-43	putrescine biosynthesis II
XAC2307	PWY-5941	glycogen degradation II (eukaryotic)
XAC2307	PWY-6724	starch degradation II
XAC2307	PWY-6737	starch degradation V
XAC2307	PWY-7238	sucrose biosynthesis II
XAC2332	PWY-5344	L-homocysteine biosynthesis
XAC2338	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
XAC2345	PWY-4983	L-citrulline-nitric oxide cycle
XAC2345	PWY-4984	urea cycle
XAC2345	PWY-5	canavanine biosynthesis
XAC2345	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
XAC2345	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
XAC2346	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
XAC2346	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
XAC2348	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
XAC2348	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
XAC2351	PWY-4983	L-citrulline-nitric oxide cycle
XAC2351	PWY-4984	urea cycle
XAC2351	PWY-5	canavanine biosynthesis
XAC2351	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
XAC2351	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
XAC2352	PWY-5686	UMP biosynthesis
XAC2360	PWY-5686	UMP biosynthesis
XAC2376	PWY-181	photorespiration
XAC2377	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
XAC2377	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
XAC2377	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
XAC2377	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
XAC2377	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
XAC2377	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
XAC2377	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
XAC2377	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
XAC2377	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
XAC2377	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
XAC2385	PWY-2301	<i>myo</i>-inositol biosynthesis
XAC2385	PWY-4702	phytate degradation I
XAC2385	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
XAC2386	PWY-6854	ethylene biosynthesis III (microbes)
XAC2391	PWY-6605	adenine and adenosine salvage II
XAC2391	PWY-6610	adenine and adenosine salvage IV
XAC2401	PWY-5676	acetyl-CoA fermentation to butanoate II
XAC2401	PWY-5741	ethylmalonyl-CoA pathway
XAC2401	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
XAC2408	PWY-6938	NADH repair
XAC2457	PWY-3781	aerobic respiration I (cytochrome c)
XAC2457	PWY-6692	Fe(II) oxidation
XAC2457	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
XAC2457	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
XAC2478	PWY-381	nitrate reduction II (assimilatory)
XAC2478	PWY-5675	nitrate reduction V (assimilatory)
XAC2478	PWY-6549	L-glutamine biosynthesis III
XAC2478	PWY-6963	ammonia assimilation cycle I
XAC2478	PWY-6964	ammonia assimilation cycle II
XAC2480	PWY-381	nitrate reduction II (assimilatory)
XAC2480	PWY-5675	nitrate reduction V (assimilatory)
XAC2480	PWY-6549	L-glutamine biosynthesis III
XAC2480	PWY-6963	ammonia assimilation cycle I
XAC2480	PWY-6964	ammonia assimilation cycle II
XAC2496	PWY-5022	4-aminobutanoate degradation V
XAC2496	PWY-6728	methylaspartate cycle
XAC2496	PWY-7126	ethylene biosynthesis IV
XAC2503	PWY-7310	D-glucosaminate degradation
XAC2513	PWY-6700	queuosine biosynthesis
XAC2514	PWY-6700	queuosine biosynthesis
XAC2519	PWY-4702	phytate degradation I
XAC2521	PWY-7183	pyrimidine nucleobases salvage I
XAC2522	PWY-6788	cellulose degradation II (fungi)
XAC2523	PWY-4041	&gamma;-glutamyl cycle
XAC2523	PWY-5826	hypoglycin biosynthesis
XAC2540	PWY-6807	xyloglucan degradation II (exoglucanase)
XAC2565	PWY-6891	thiazole biosynthesis II (Bacillus)
XAC2565	PWY-6892	thiazole biosynthesis I (E. coli)
XAC2565	PWY-7560	methylerythritol phosphate pathway II
XAC2566	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
XAC2566	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
XAC2566	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
XAC2566	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
XAC2568	PWY-5129	sphingolipid biosynthesis (plants)
XAC2571	PWY-4381	fatty acid biosynthesis initiation I
XAC2583	PWY-6655	xanthan biosynthesis
XAC2583	PWY-6658	acetan biosynthesis
XAC2598	PWY-5941	glycogen degradation II (eukaryotic)
XAC2598	PWY-6724	starch degradation II
XAC2598	PWY-6737	starch degradation V
XAC2598	PWY-7238	sucrose biosynthesis II
XAC2609	PWY-6902	chitin degradation II
XAC2677	PWY-6854	ethylene biosynthesis III (microbes)
XAC2679	PWY-6123	inosine-5'-phosphate biosynthesis I
XAC2679	PWY-7234	inosine-5'-phosphate biosynthesis III
XAC2681	PWY-5316	nicotine biosynthesis
XAC2681	PWY-5381	pyridine nucleotide cycling (plants)
XAC2681	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
XAC2681	PWY-7342	superpathway of nicotine biosynthesis
XAC2707	PWY-1042	glycolysis IV (plant cytosol)
XAC2707	PWY-5484	glycolysis II (from fructose 6-phosphate)
XAC2707	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XAC2707	PWY-7003	glycerol degradation to butanol
XAC2714	PWY-6749	CMP-legionaminate biosynthesis I
XAC2715	PWY-4381	fatty acid biosynthesis initiation I
XAC2715	PWY-5743	3-hydroxypropanoate cycle
XAC2715	PWY-5744	glyoxylate assimilation
XAC2715	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
XAC2715	PWY-6679	jadomycin biosynthesis
XAC2715	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
XAC2723	PWY-2941	L-lysine biosynthesis II
XAC2723	PWY-2942	L-lysine biosynthesis III
XAC2723	PWY-5097	L-lysine biosynthesis VI
XAC2723	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
XAC2723	PWY-6559	spermidine biosynthesis II
XAC2723	PWY-6562	norspermidine biosynthesis
XAC2723	PWY-7153	grixazone biosynthesis
XAC2723	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
XAC2725	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
XAC2728	PWY-5669	phosphatidylethanolamine biosynthesis I
XAC2740	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
XAC2759	PWY-5491	diethylphosphate degradation
XAC2778	PWY-5381	pyridine nucleotide cycling (plants)
XAC2778	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
XAC2795	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
XAC2847	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
XAC2874	PWY-1622	formaldehyde assimilation I (serine pathway)
XAC2874	PWY-5484	glycolysis II (from fructose 6-phosphate)
XAC2908	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
XAC2908	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
XAC2911	PWY-2941	L-lysine biosynthesis II
XAC2911	PWY-2942	L-lysine biosynthesis III
XAC2911	PWY-5097	L-lysine biosynthesis VI
XAC2911	PWY-6559	spermidine biosynthesis II
XAC2911	PWY-6562	norspermidine biosynthesis
XAC2911	PWY-7153	grixazone biosynthesis
XAC2916	PWY-5686	UMP biosynthesis
XAC2925	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
XAC2926	PWY-3341	L-proline biosynthesis III
XAC2926	PWY-4981	L-proline biosynthesis II (from arginine)
XAC2926	PWY-6344	L-ornithine degradation II (Stickland reaction)
XAC2938	PWY-6823	molybdenum cofactor biosynthesis
XAC2938	PWY-6891	thiazole biosynthesis II (Bacillus)
XAC2938	PWY-6892	thiazole biosynthesis I (E. coli)
XAC2938	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
XAC2959	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
XAC2959	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
XAC2959	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
XAC2961	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
XAC2961	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
XAC2965	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
XAC2965	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
XAC2968	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
XAC2968	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
XAC2984	PWY-7533	gliotoxin biosynthesis
XAC3009	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
XAC3009	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
XAC3010	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
XAC3011	PWY-6164	3-dehydroquinate biosynthesis I
XAC3013	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
XAC3013	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
XAC3040	PWY-5344	L-homocysteine biosynthesis
XAC3070	PWY-2723	trehalose degradation V
XAC3070	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
XAC3070	PWY-5661	GDP-glucose biosynthesis
XAC3070	PWY-7238	sucrose biosynthesis II
XAC3070	PWY-7385	1,3-propanediol biosynthesis (engineered)
XAC3074	PWY-6902	chitin degradation II
XAC3075	PWY-6807	xyloglucan degradation II (exoglucanase)
XAC3078	PWY-6807	xyloglucan degradation II (exoglucanase)
XAC3084	PWY-6807	xyloglucan degradation II (exoglucanase)
XAC3109	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
XAC3109	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
XAC3109	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
XAC3109	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
XAC3115	PWY-6420	pyrroloquinoline quinone biosynthesis
XAC3120	PWY-2723	trehalose degradation V
XAC3120	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
XAC3120	PWY-5661	GDP-glucose biosynthesis
XAC3120	PWY-7238	sucrose biosynthesis II
XAC3120	PWY-7385	1,3-propanediol biosynthesis (engineered)
XAC3137	PWY-6703	preQ<sub>0</sub> biosynthesis
XAC3139	PWY-6703	preQ<sub>0</sub> biosynthesis
XAC3184	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
XAC3184	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
XAC3184	PWY-6269	adenosylcobalamin salvage from cobinamide II
XAC3186	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
XAC3186	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
XAC3186	PWY-6269	adenosylcobalamin salvage from cobinamide II
XAC3187	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
XAC3187	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
XAC3187	PWY-6269	adenosylcobalamin salvage from cobinamide II
XAC3189	PWY-5443	aminopropanol phosphate biosynthesis I
XAC3191	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
XAC3191	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
XAC3191	PWY-6268	adenosylcobalamin salvage from cobalamin
XAC3191	PWY-6269	adenosylcobalamin salvage from cobinamide II
XAC3220	PWY-5381	pyridine nucleotide cycling (plants)
XAC3220	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
XAC3235	PWY-5392	reductive TCA cycle II
XAC3235	PWY-5537	pyruvate fermentation to acetate V
XAC3235	PWY-5538	pyruvate fermentation to acetate VI
XAC3235	PWY-5690	TCA cycle II (plants and fungi)
XAC3235	PWY-5913	TCA cycle VI (obligate autotrophs)
XAC3235	PWY-6728	methylaspartate cycle
XAC3235	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XAC3235	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
XAC3236	PWY-5392	reductive TCA cycle II
XAC3236	PWY-5537	pyruvate fermentation to acetate V
XAC3236	PWY-5538	pyruvate fermentation to acetate VI
XAC3236	PWY-5690	TCA cycle II (plants and fungi)
XAC3236	PWY-5913	TCA cycle VI (obligate autotrophs)
XAC3236	PWY-6728	methylaspartate cycle
XAC3236	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XAC3236	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
XAC3302	PWY-6891	thiazole biosynthesis II (Bacillus)
XAC3302	PWY-6892	thiazole biosynthesis I (E. coli)
XAC3312	PWY-6807	xyloglucan degradation II (exoglucanase)
XAC3328	PWY-5278	sulfite oxidation III
XAC3328	PWY-5340	sulfate activation for sulfonation
XAC3328	PWY-6683	sulfate reduction III (assimilatory)
XAC3328	PWY-6932	selenate reduction
XAC3329	PWY-5278	sulfite oxidation III
XAC3329	PWY-5340	sulfate activation for sulfonation
XAC3329	PWY-6683	sulfate reduction III (assimilatory)
XAC3329	PWY-6932	selenate reduction
XAC3330	PWY-6683	sulfate reduction III (assimilatory)
XAC3331	PWY-6683	sulfate reduction III (assimilatory)
XAC3340	PWY-5194	siroheme biosynthesis
XAC3340	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
XAC3341	PWY-6936	seleno-amino acid biosynthesis
XAC3342	PWY-6825	phosphatidylcholine biosynthesis V
XAC3344	PWY-1042	glycolysis IV (plant cytosol)
XAC3344	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
XAC3344	PWY-5484	glycolysis II (from fructose 6-phosphate)
XAC3344	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XAC3344	PWY-7385	1,3-propanediol biosynthesis (engineered)
XAC3345	PWY-1042	glycolysis IV (plant cytosol)
XAC3345	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
XAC3345	PWY-5484	glycolysis II (from fructose 6-phosphate)
XAC3345	PWY-5723	Rubisco shunt
XAC3345	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XAC3345	PWY-6886	1-butanol autotrophic biosynthesis
XAC3345	PWY-6901	superpathway of glucose and xylose degradation
XAC3345	PWY-7003	glycerol degradation to butanol
XAC3345	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
XAC3345	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
XAC3347	PWY-1042	glycolysis IV (plant cytosol)
XAC3347	PWY-5484	glycolysis II (from fructose 6-phosphate)
XAC3347	PWY-6886	1-butanol autotrophic biosynthesis
XAC3347	PWY-6901	superpathway of glucose and xylose degradation
XAC3347	PWY-7003	glycerol degradation to butanol
XAC3352	PWY-1042	glycolysis IV (plant cytosol)
XAC3352	PWY-5484	glycolysis II (from fructose 6-phosphate)
XAC3352	PWY-6901	superpathway of glucose and xylose degradation
XAC3352	PWY-7003	glycerol degradation to butanol
XAC3353	PWY-2582	brassinosteroid biosynthesis II
XAC3353	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
XAC3353	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
XAC3353	PWY-6948	sitosterol degradation to androstenedione
XAC3353	PWY-699	brassinosteroid biosynthesis I
XAC3353	PWY-7299	progesterone biosynthesis
XAC3372	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
XAC3372	PWY-5723	Rubisco shunt
XAC3372	PWY-6891	thiazole biosynthesis II (Bacillus)
XAC3372	PWY-6892	thiazole biosynthesis I (E. coli)
XAC3372	PWY-6901	superpathway of glucose and xylose degradation
XAC3372	PWY-7560	methylerythritol phosphate pathway II
XAC3395	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
XAC3399	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
XAC3411	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
XAC3411	PWY-5723	Rubisco shunt
XAC3415	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
XAC3415	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
XAC3415	PWY-6897	thiamin salvage II
XAC3415	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
XAC3415	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
XAC3415	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
XAC3415	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
XAC3420	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
XAC3437	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
XAC3438	PWY-1042	glycolysis IV (plant cytosol)
XAC3438	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
XAC3438	PWY-5484	glycolysis II (from fructose 6-phosphate)
XAC3438	PWY-6531	mannitol cycle
XAC3438	PWY-7385	1,3-propanediol biosynthesis (engineered)
XAC3447	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
XAC3450	PWY-4041	&gamma;-glutamyl cycle
XAC3450	PWY-5826	hypoglycin biosynthesis
XAC3451	PWY-5101	L-isoleucine biosynthesis II
XAC3451	PWY-5103	L-isoleucine biosynthesis III
XAC3451	PWY-5104	L-isoleucine biosynthesis IV
XAC3451	PWY-7111	pyruvate fermentation to isobutanol (engineered)
XAC3452	PWY-5101	L-isoleucine biosynthesis II
XAC3452	PWY-5103	L-isoleucine biosynthesis III
XAC3452	PWY-5104	L-isoleucine biosynthesis IV
XAC3452	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
XAC3452	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
XAC3452	PWY-6389	(<i>S</i>)-acetoin biosynthesis
XAC3452	PWY-7111	pyruvate fermentation to isobutanol (engineered)
XAC3455	PWY-6871	3-methylbutanol biosynthesis
XAC3456	PWY-7396	butanol and isobutanol biosynthesis (engineered)
XAC3470	PWY-1281	sulfoacetaldehyde degradation I
XAC3470	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
XAC3470	PWY-5482	pyruvate fermentation to acetate II
XAC3470	PWY-5485	pyruvate fermentation to acetate IV
XAC3470	PWY-5497	purine nucleobases degradation II (anaerobic)
XAC3470	PWY-6637	sulfolactate degradation II
XAC3470	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
XAC3486	PWY-5676	acetyl-CoA fermentation to butanoate II
XAC3486	PWY-5741	ethylmalonyl-CoA pathway
XAC3486	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
XAC3505	PWY-6769	rhamnogalacturonan type I degradation I (fungi)
XAC3505	PWY-6771	rhamnogalacturonan type I degradation II (bacteria)
XAC3506	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
XAC3507	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
XAC3512	PWY-4202	arsenate detoxification I (glutaredoxin)
XAC3512	PWY-4621	arsenate detoxification II (glutaredoxin)
XAC3516	PWY-6788	cellulose degradation II (fungi)
XAC3518	PWY-1001	cellulose biosynthesis
XAC3521	PWY-5381	pyridine nucleotide cycling (plants)
XAC3549	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
XAC3549	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
XAC3549	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
XAC3556	PWY-5988	wound-induced proteolysis I
XAC3556	PWY-6018	seed germination protein turnover
XAC3565	PWY-5669	phosphatidylethanolamine biosynthesis I
XAC3579	PWY-6749	CMP-legionaminate biosynthesis I
XAC3580	PWY-5659	GDP-mannose biosynthesis
XAC3580	PWY-6073	alginate biosynthesis I (algal)
XAC3580	PWY-6082	alginate biosynthesis II (bacterial)
XAC3580	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
XAC3581	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
XAC3584	PWY-3221	dTDP-L-rhamnose biosynthesis II
XAC3584	PWY-6808	dTDP-D-forosamine biosynthesis
XAC3584	PWY-6942	dTDP-D-desosamine biosynthesis
XAC3584	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
XAC3584	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
XAC3584	PWY-6974	dTDP-L-olivose biosynthesis
XAC3584	PWY-6976	dTDP-L-mycarose biosynthesis
XAC3584	PWY-7104	dTDP-L-megosamine biosynthesis
XAC3584	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
XAC3584	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
XAC3584	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
XAC3584	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
XAC3584	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
XAC3584	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
XAC3584	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
XAC3584	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
XAC3585	PWY-3221	dTDP-L-rhamnose biosynthesis II
XAC3585	PWY-6808	dTDP-D-forosamine biosynthesis
XAC3585	PWY-6942	dTDP-D-desosamine biosynthesis
XAC3585	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
XAC3585	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
XAC3585	PWY-6974	dTDP-L-olivose biosynthesis
XAC3585	PWY-6976	dTDP-L-mycarose biosynthesis
XAC3585	PWY-7104	dTDP-L-megosamine biosynthesis
XAC3585	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
XAC3585	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
XAC3585	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
XAC3585	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
XAC3585	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
XAC3585	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
XAC3585	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
XAC3585	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
XAC3590	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
XAC3590	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
XAC3616	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
XAC3621	PWY-181	photorespiration
XAC3623	PWY-5971	palmitate biosynthesis II (bacteria and plants)
XAC3623	PWY-5973	<i>cis</i>-vaccenate biosynthesis
XAC3623	PWY-5989	stearate biosynthesis II (bacteria and plants)
XAC3623	PWY-5994	palmitate biosynthesis I (animals and fungi)
XAC3623	PWY-6113	superpathway of mycolate biosynthesis
XAC3623	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
XAC3623	PWY-6519	8-amino-7-oxononanoate biosynthesis I
XAC3623	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
XAC3623	PWYG-321	mycolate biosynthesis
XAC3632	PWY-5386	methylglyoxal degradation I
XAC3637	PWY-6749	CMP-legionaminate biosynthesis I
XAC3644	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
XAC3647	PWY-3461	L-tyrosine biosynthesis II
XAC3647	PWY-3462	L-phenylalanine biosynthesis II
XAC3647	PWY-6120	L-tyrosine biosynthesis III
XAC3647	PWY-6627	salinosporamide A biosynthesis
XAC3649	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
XAC3651	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
XAC3659	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
XAC3659	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
XAC3687	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
XAC3740	PWY-3821	galactose degradation III
XAC3740	PWY-6317	galactose degradation I (Leloir pathway)
XAC3740	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
XAC3740	PWY-6527	stachyose degradation
XAC3740	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
XAC3740	PWY-7344	UDP-D-galactose biosynthesis
XAC3742	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
XAC3742	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
XAC3792	PWY-6167	flavin biosynthesis II (archaea)
XAC3792	PWY-6168	flavin biosynthesis III (fungi)
XAC3792	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
XAC3831	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
XAC3835	PWY-5913	TCA cycle VI (obligate autotrophs)
XAC3835	PWY-6549	L-glutamine biosynthesis III
XAC3835	PWY-6728	methylaspartate cycle
XAC3835	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XAC3835	PWY-7124	ethylene biosynthesis V (engineered)
XAC3835	PWY-7254	TCA cycle VII (acetate-producers)
XAC3835	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
XAC3846	PWY-6700	queuosine biosynthesis
XAC3859	PWY-6454	vancomycin resistance I
XAC3859	PWY-6455	vancomycin resistance II
XAC3870	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
XAC3870	PWY-6148	tetrahydromethanopterin biosynthesis
XAC3870	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
XAC3870	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
XAC3887	PWY-3781	aerobic respiration I (cytochrome c)
XAC3887	PWY-4521	arsenite oxidation I (respiratory)
XAC3887	PWY-6692	Fe(II) oxidation
XAC3887	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
XAC3890	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
XAC3890	PWY-6853	ethylene biosynthesis II (microbes)
XAC3890	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
XAC3903	PWY-5686	UMP biosynthesis
XAC3912	PWY-6749	CMP-legionaminate biosynthesis I
XAC3913	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
XAC3913	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
XAC3913	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
XAC3913	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
XAC3921	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
XAC3921	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
XAC3921	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
XAC3921	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
XAC3923	PWY-40	putrescine biosynthesis I
XAC3923	PWY-43	putrescine biosynthesis II
XAC3923	PWY-6305	putrescine biosynthesis IV
XAC3923	PWY-6834	spermidine biosynthesis III
XAC3928	PWY-6902	chitin degradation II
XAC3928	PWY-7437	protein <i>O</i>-[<i>N</i>-acetyl]-glucosylation
XAC3987	PWY-5988	wound-induced proteolysis I
XAC3987	PWY-6018	seed germination protein turnover
XAC3990	PWY-5506	methanol oxidation to formaldehyde IV
XAC4009	PWY-31	canavanine degradation
XAC4009	PWY-4984	urea cycle
XAC4009	PWY-6305	putrescine biosynthesis IV
XAC4009	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
XAC4014	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
XAC4014	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
XAC4014	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
XAC4014	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
XAC4014	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
XAC4014	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
XAC4017	PWY-3961	phosphopantothenate biosynthesis II
XAC4018	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
XAC4018	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
XAC4029	PWY-5506	methanol oxidation to formaldehyde IV
XAC4030	PWY-5506	methanol oxidation to formaldehyde IV
XAC4034	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
XAC4040	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
XAC4040	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
XAC4068	PWY-6654	phosphopantothenate biosynthesis III
XAC4074	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
XAC4074	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
XAC4074	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
XAC4074	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
XAC4074	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
XAC4074	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
XAC4074	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
XAC4074	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
XAC4075	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
XAC4075	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
XAC4075	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
XAC4075	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
XAC4075	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
XAC4075	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
XAC4075	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
XAC4075	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
XAC4077	PWY-5392	reductive TCA cycle II
XAC4077	PWY-5537	pyruvate fermentation to acetate V
XAC4077	PWY-5538	pyruvate fermentation to acetate VI
XAC4077	PWY-5690	TCA cycle II (plants and fungi)
XAC4077	PWY-5913	TCA cycle VI (obligate autotrophs)
XAC4077	PWY-6728	methylaspartate cycle
XAC4077	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XAC4077	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
XAC4079	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
XAC4079	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XAC4079	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
XAC4079	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
XAC4081	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
XAC4098	PWY-5971	palmitate biosynthesis II (bacteria and plants)
XAC4098	PWY-5973	<i>cis</i>-vaccenate biosynthesis
XAC4098	PWY-5989	stearate biosynthesis II (bacteria and plants)
XAC4098	PWY-5994	palmitate biosynthesis I (animals and fungi)
XAC4098	PWY-6113	superpathway of mycolate biosynthesis
XAC4098	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
XAC4098	PWY-6519	8-amino-7-oxononanoate biosynthesis I
XAC4098	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
XAC4098	PWYG-321	mycolate biosynthesis
XAC4099	PWY-5667	CDP-diacylglycerol biosynthesis I
XAC4099	PWY-5981	CDP-diacylglycerol biosynthesis III
XAC4099	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
XAC4099	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
XAC4109	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
XAC4109	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
XAC4168	PWY-6012	acyl carrier protein metabolism I
XAC4168	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
XAC4170	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
XAC4179	PWY-6672	<i>cis</i>-genanyl-CoA degradation
XAC4179	PWY-7118	chitin degradation to ethanol
XAC4197	PWY-5530	sorbitol biosynthesis II
XAC4201	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
XAC4201	PWY-6416	quinate degradation II
XAC4201	PWY-6707	gallate biosynthesis
XAC4244	PWY-4261	glycerol degradation I
XAC4249	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
XAC4250	PWY-6807	xyloglucan degradation II (exoglucanase)
XAC4251	PWY-7247	&beta;-D-glucuronide and D-glucuronate degradation
XAC4251	PWY-7248	pectin degradation III
XAC4252	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
XAC4254	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
XAC4270	PWY-5667	CDP-diacylglycerol biosynthesis I
XAC4270	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
XAC4276	PWY-5686	UMP biosynthesis
XAC4282	PWY-7199	pyrimidine deoxyribonucleosides salvage
XAC4294	PWY-5874	heme degradation
XAC4294	PWY-5915	phycoerythrobilin biosynthesis I
XAC4294	PWY-5917	phycocyanobilin biosynthesis
XAC4294	PWY-7170	phytochromobilin biosynthesis
XAC4302	PWY-5663	tetrahydrobiopterin biosynthesis I
XAC4302	PWY-5664	tetrahydrobiopterin biosynthesis II
XAC4302	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
XAC4302	PWY-6703	preQ<sub>0</sub> biosynthesis
XAC4302	PWY-6983	tetrahydrobiopterin biosynthesis III
XAC4302	PWY-7442	drosopterin and aurodrosopterin biosynthesis
XAC4326	PWY-5169	cyanurate degradation
XAC4326	PWY-5703	urea degradation I
XAC4327	PWY-5169	cyanurate degradation
XAC4327	PWY-5703	urea degradation I
XAC4327	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
XAC4362	PWY-7533	gliotoxin biosynthesis
XAC4369	PWY-6348	phosphate acquisition
XAC4369	PWY-6357	phosphate utilization in cell wall regeneration
XAC4369	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
XAC4369	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
