YPA_0017 PWY-6728 methylaspartate cycle YPA_0017 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) YPA_0017 PWY-7118 chitin degradation to ethanol YPA_0017 PWY-7294 xylose degradation IV YPA_0017 PWY-7295 L-arabinose degradation IV YPA_0018 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) YPA_0021 PWY-2201 folate transformations I YPA_0021 PWY-3841 folate transformations II YPA_0025 PWY-2941 L-lysine biosynthesis II YPA_0025 PWY-2942 L-lysine biosynthesis III YPA_0025 PWY-5097 L-lysine biosynthesis VI YPA_0025 PWY-6559 spermidine biosynthesis II YPA_0025 PWY-6562 norspermidine biosynthesis YPA_0025 PWY-7153 grixazone biosynthesis YPA_0026 PWY-3801 sucrose degradation II (sucrose synthase) YPA_0026 PWY-5054 sorbitol biosynthesis I YPA_0026 PWY-5384 sucrose degradation IV (sucrose phosphorylase) YPA_0026 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II YPA_0026 PWY-5659 GDP-mannose biosynthesis YPA_0026 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) YPA_0026 PWY-621 sucrose degradation III (sucrose invertase) YPA_0026 PWY-622 starch biosynthesis YPA_0026 PWY-6531 mannitol cycle YPA_0026 PWY-6981 chitin biosynthesis YPA_0026 PWY-7238 sucrose biosynthesis II YPA_0026 PWY-7347 sucrose biosynthesis III YPA_0026 PWY-7385 1,3-propanediol biosynthesis (engineered) YPA_0050 PWY-6749 CMP-legionaminate biosynthesis I YPA_0051 PWY-6614 tetrahydrofolate biosynthesis YPA_0056 PWY-5265 peptidoglycan biosynthesis II (staphylococci) YPA_0056 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) YPA_0066 PWY-1622 formaldehyde assimilation I (serine pathway) YPA_0066 PWY-5392 reductive TCA cycle II YPA_0066 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation YPA_0066 PWY-5690 TCA cycle II (plants and fungi) YPA_0066 PWY-5913 TCA cycle VI (obligate autotrophs) YPA_0066 PWY-6728 methylaspartate cycle YPA_0066 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) YPA_0066 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type YPA_0066 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) YPA_0070 PWY-5484 glycolysis II (from fructose 6-phosphate) YPA_0095 PWY-1622 formaldehyde assimilation I (serine pathway) YPA_0095 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type YPA_0095 PWY-5913 TCA cycle VI (obligate autotrophs) YPA_0095 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) YPA_0095 PWY-6146 Methanobacterium thermoautotrophicum biosynthetic metabolism YPA_0095 PWY-6549 L-glutamine biosynthesis III YPA_0095 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type YPA_0095 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type YPA_0095 PWY-7124 ethylene biosynthesis V (engineered) YPA_0096 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) YPA_0097 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) YPA_0097 PWY-7400 L-arginine biosynthesis IV (archaebacteria) YPA_0098 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) YPA_0098 PWY-7400 L-arginine biosynthesis IV (archaebacteria) YPA_0099 PWY-4983 L-citrulline-nitric oxide cycle YPA_0099 PWY-4984 urea cycle YPA_0099 PWY-5 canavanine biosynthesis YPA_0099 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) YPA_0099 PWY-7400 L-arginine biosynthesis IV (archaebacteria) YPA_0108 PWY-5083 NAD/NADH phosphorylation and dephosphorylation YPA_0113 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) YPA_0113 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) YPA_0121 PWY-5101 L-isoleucine biosynthesis II YPA_0121 PWY-5103 L-isoleucine biosynthesis III YPA_0121 PWY-5104 L-isoleucine biosynthesis IV YPA_0121 PWY-5938 (R)-acetoin biosynthesis I YPA_0121 PWY-5939 (R)-acetoin biosynthesis II YPA_0121 PWY-6389 (S)-acetoin biosynthesis YPA_0121 PWY-7111 pyruvate fermentation to isobutanol (engineered) YPA_0123 PWY-5057 L-valine degradation II YPA_0123 PWY-5076 L-leucine degradation III YPA_0123 PWY-5078 L-isoleucine degradation II YPA_0123 PWY-5101 L-isoleucine biosynthesis II YPA_0123 PWY-5103 L-isoleucine biosynthesis III YPA_0123 PWY-5104 L-isoleucine biosynthesis IV YPA_0123 PWY-5108 L-isoleucine biosynthesis V YPA_0124 PWY-5101 L-isoleucine biosynthesis II YPA_0124 PWY-5103 L-isoleucine biosynthesis III YPA_0124 PWY-5104 L-isoleucine biosynthesis IV YPA_0124 PWY-7111 pyruvate fermentation to isobutanol (engineered) YPA_0132 PWY-5101 L-isoleucine biosynthesis II YPA_0132 PWY-5103 L-isoleucine biosynthesis III YPA_0132 PWY-5104 L-isoleucine biosynthesis IV YPA_0132 PWY-7111 pyruvate fermentation to isobutanol (engineered) YPA_0151 PWY-7219 adenosine ribonucleotides de novo biosynthesis YPA_0152 PWY-5265 peptidoglycan biosynthesis II (staphylococci) YPA_0152 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) YPA_0152 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) YPA_0152 PWY-7290 Escherichia coli serotype O86 O-antigen biosynthesis YPA_0152 PWY-7530 β-D-galactosaminyl-(1→3)-N-acetyl-α-D-galactosamine biosynthesis YPA_0154 PWY-7335 UDP-N-acetyl-α-D-mannosaminouronate biosynthesis YPA_0156 PWY-3221 dTDP-L-rhamnose biosynthesis II YPA_0156 PWY-6808 dTDP-D-forosamine biosynthesis YPA_0156 PWY-6942 dTDP-D-desosamine biosynthesis YPA_0156 PWY-6953 dTDP-3-acetamido-3,6-dideoxy-α-D-galactose biosynthesis YPA_0156 PWY-6973 dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis YPA_0156 PWY-6974 dTDP-L-olivose biosynthesis YPA_0156 PWY-6976 dTDP-L-mycarose biosynthesis YPA_0156 PWY-7104 dTDP-L-megosamine biosynthesis YPA_0156 PWY-7301 dTDP-β-L-noviose biosynthesis YPA_0156 PWY-7312 dTDP-D-β-fucofuranose biosynthesis YPA_0156 PWY-7315 dTDP-N-acetylthomosamine biosynthesis YPA_0156 PWY-7316 dTDP-N-acetylviosamine biosynthesis YPA_0156 PWY-7318 dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis YPA_0156 PWY-7413 dTDP-6-deoxy-α-D-allose biosynthesis YPA_0156 PWY-7414 dTDP-α-D-mycaminose biosynthesis YPA_0156 PWY-7440 dTDP-β-L-4-epi-vancosamine biosynthesis YPA_0157 PWY-3221 dTDP-L-rhamnose biosynthesis II YPA_0157 PWY-6808 dTDP-D-forosamine biosynthesis YPA_0157 PWY-6942 dTDP-D-desosamine biosynthesis YPA_0157 PWY-6953 dTDP-3-acetamido-3,6-dideoxy-α-D-galactose biosynthesis YPA_0157 PWY-6973 dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis YPA_0157 PWY-6974 dTDP-L-olivose biosynthesis YPA_0157 PWY-6976 dTDP-L-mycarose biosynthesis YPA_0157 PWY-7104 dTDP-L-megosamine biosynthesis YPA_0157 PWY-7301 dTDP-β-L-noviose biosynthesis YPA_0157 PWY-7312 dTDP-D-β-fucofuranose biosynthesis YPA_0157 PWY-7315 dTDP-N-acetylthomosamine biosynthesis YPA_0157 PWY-7316 dTDP-N-acetylviosamine biosynthesis YPA_0157 PWY-7318 dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis YPA_0157 PWY-7413 dTDP-6-deoxy-α-D-allose biosynthesis YPA_0157 PWY-7414 dTDP-α-D-mycaminose biosynthesis YPA_0157 PWY-7440 dTDP-β-L-4-epi-vancosamine biosynthesis YPA_0158 PWY-7315 dTDP-N-acetylthomosamine biosynthesis YPA_0159 PWY-7315 dTDP-N-acetylthomosamine biosynthesis YPA_0171 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) YPA_0171 PWY-5189 tetrapyrrole biosynthesis II (from glycine) YPA_0172 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) YPA_0172 PWY-5189 tetrapyrrole biosynthesis II (from glycine) YPA_0177 PWY-2941 L-lysine biosynthesis II YPA_0177 PWY-5097 L-lysine biosynthesis VI YPA_0188 PWY-6803 phosphatidylcholine acyl editing YPA_0188 PWY-7409 phospholipid remodeling (phosphatidylethanolamine, yeast) YPA_0188 PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) YPA_0188 PWY-7417 phospholipid remodeling (phosphatidate, yeast) YPA_0196 PWY-4261 glycerol degradation I YPA_0196 PWY-6118 glycerol-3-phosphate shuttle YPA_0196 PWY-6952 glycerophosphodiester degradation YPA_0197 PWY-4261 glycerol degradation I YPA_0197 PWY-6118 glycerol-3-phosphate shuttle YPA_0197 PWY-6952 glycerophosphodiester degradation YPA_0236 PWY-5041 S-adenosyl-L-methionine cycle II YPA_0236 PWY-6151 S-adenosyl-L-methionine cycle I YPA_0236 PWY-6936 seleno-amino acid biosynthesis YPA_0236 PWY-702 L-methionine biosynthesis II YPA_0238 PWY-4202 arsenate detoxification I (glutaredoxin) YPA_0238 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation YPA_0238 PWY-6608 guanosine nucleotides degradation III YPA_0238 PWY-6609 adenine and adenosine salvage III YPA_0238 PWY-6611 adenine and adenosine salvage V YPA_0238 PWY-6620 guanine and guanosine salvage YPA_0238 PWY-6627 salinosporamide A biosynthesis YPA_0238 PWY-6644 fluoroacetate and fluorothreonine biosynthesis YPA_0238 PWY-7179 purine deoxyribonucleosides degradation I YPA_0238 PWY-7179-1 purine deoxyribonucleosides degradation YPA_0243 PWY-5839 menaquinol-7 biosynthesis YPA_0243 PWY-5844 menaquinol-9 biosynthesis YPA_0243 PWY-5849 menaquinol-6 biosynthesis YPA_0243 PWY-5890 menaquinol-10 biosynthesis YPA_0243 PWY-5891 menaquinol-11 biosynthesis YPA_0243 PWY-5892 menaquinol-12 biosynthesis YPA_0243 PWY-5895 menaquinol-13 biosynthesis YPA_0254 PWY-5839 menaquinol-7 biosynthesis YPA_0254 PWY-5851 demethylmenaquinol-9 biosynthesis YPA_0254 PWY-5852 demethylmenaquinol-8 biosynthesis I YPA_0254 PWY-5853 demethylmenaquinol-6 biosynthesis I YPA_0254 PWY-5890 menaquinol-10 biosynthesis YPA_0254 PWY-5891 menaquinol-11 biosynthesis YPA_0254 PWY-5892 menaquinol-12 biosynthesis YPA_0254 PWY-5895 menaquinol-13 biosynthesis YPA_0265 PWY-2941 L-lysine biosynthesis II YPA_0265 PWY-2942 L-lysine biosynthesis III YPA_0265 PWY-5097 L-lysine biosynthesis VI YPA_0265 PWY-6559 spermidine biosynthesis II YPA_0265 PWY-6562 norspermidine biosynthesis YPA_0265 PWY-7153 grixazone biosynthesis YPA_0266 PWY-2201 folate transformations I YPA_0266 PWY-3841 folate transformations II YPA_0280 PWY-6157 autoinducer AI-1 biosynthesis YPA_0304 PWY-46 putrescine biosynthesis III YPA_0304 PWY-6305 putrescine biosynthesis IV YPA_0320 PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation YPA_0323 PWY-3341 L-proline biosynthesis III YPA_0323 PWY-4981 L-proline biosynthesis II (from arginine) YPA_0323 PWY-6344 L-ornithine degradation II (Stickland reaction) YPA_0324 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) YPA_0326 PWY-43 putrescine biosynthesis II YPA_0327 PWY-43 putrescine biosynthesis II YPA_0335 PWY-5041 S-adenosyl-L-methionine cycle II YPA_0335 PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis YPA_0336 PWY-40 putrescine biosynthesis I YPA_0336 PWY-43 putrescine biosynthesis II YPA_0336 PWY-6305 putrescine biosynthesis IV YPA_0336 PWY-6834 spermidine biosynthesis III YPA_0340 PWY-1861 formaldehyde assimilation II (RuMP Cycle) YPA_0340 PWY-5723 Rubisco shunt YPA_0340 PWY-6891 thiazole biosynthesis II (Bacillus) YPA_0340 PWY-6892 thiazole biosynthesis I (E. coli) YPA_0340 PWY-6901 superpathway of glucose and xylose degradation YPA_0340 PWY-7560 methylerythritol phosphate pathway II YPA_0343 PWY-1042 glycolysis IV (plant cytosol) YPA_0343 PWY-5484 glycolysis II (from fructose 6-phosphate) YPA_0343 PWY-6886 1-butanol autotrophic biosynthesis YPA_0343 PWY-6901 superpathway of glucose and xylose degradation YPA_0343 PWY-7003 glycerol degradation to butanol YPA_0344 PWY-1042 glycolysis IV (plant cytosol) YPA_0344 PWY-1861 formaldehyde assimilation II (RuMP Cycle) YPA_0344 PWY-5484 glycolysis II (from fructose 6-phosphate) YPA_0344 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) YPA_0344 PWY-7385 1,3-propanediol biosynthesis (engineered) YPA_0352 PWY-1861 formaldehyde assimilation II (RuMP Cycle) YPA_0352 PWY-5723 Rubisco shunt YPA_0418 PWY-6807 xyloglucan degradation II (exoglucanase) YPA_0419 PWY-7310 D-glucosaminate degradation YPA_0426 PWY-7077 N-acetyl-D-galactosamine degradation YPA_0426 PWY-7395 D-galactosamine and N-acetyl-D-galactosamine degradation YPA_0431 PWY-6507 4-deoxy-L-threo-hex-4-enopyranuronate degradation YPA_0432 PWY-6906 chitin derivatives degradation YPA_0432 PWY-7077 N-acetyl-D-galactosamine degradation YPA_0432 PWY-7395 D-galactosamine and N-acetyl-D-galactosamine degradation YPA_0436 PWY-7310 D-glucosaminate degradation YPA_0450 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type YPA_0450 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) YPA_0450 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type YPA_0450 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type YPA_0473 PWY-2941 L-lysine biosynthesis II YPA_0473 PWY-2942 L-lysine biosynthesis III YPA_0473 PWY-5097 L-lysine biosynthesis VI YPA_0476 PWY-6622 heptadecane biosynthesis YPA_0476 PWY-7032 alkane biosynthesis I YPA_0485 PWY-3841 folate transformations II YPA_0485 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I YPA_0485 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II YPA_0485 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV YPA_0485 PWY-7199 pyrimidine deoxyribonucleosides salvage YPA_0485 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP YPA_0494 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) YPA_0499 PWY-6823 molybdenum cofactor biosynthesis YPA_0499 PWY-6891 thiazole biosynthesis II (Bacillus) YPA_0499 PWY-6892 thiazole biosynthesis I (E. coli) YPA_0499 PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis YPA_0508 PWY-6700 queuosine biosynthesis YPA_0524 PWY-7560 methylerythritol phosphate pathway II YPA_0531 PWY-5971 palmitate biosynthesis II (bacteria and plants) YPA_0531 PWY-5973 cis-vaccenate biosynthesis YPA_0531 PWY-5989 stearate biosynthesis II (bacteria and plants) YPA_0531 PWY-5994 palmitate biosynthesis I (animals and fungi) YPA_0531 PWY-6113 superpathway of mycolate biosynthesis YPA_0531 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) YPA_0531 PWY-6519 8-amino-7-oxononanoate biosynthesis I YPA_0531 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) YPA_0531 PWYG-321 mycolate biosynthesis YPA_0536 PWY-4381 fatty acid biosynthesis initiation I YPA_0536 PWY-5743 3-hydroxypropanoate cycle YPA_0536 PWY-5744 glyoxylate assimilation YPA_0536 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle YPA_0536 PWY-6679 jadomycin biosynthesis YPA_0536 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) YPA_0557 PWY-5386 methylglyoxal degradation I YPA_0584 PWY-5083 NAD/NADH phosphorylation and dephosphorylation YPA_0584 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) YPA_0584 PWY-7269 NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast) YPA_0589 PWY-3781 aerobic respiration I (cytochrome c) YPA_0589 PWY-4302 aerobic respiration III (alternative oxidase pathway) YPA_0589 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation YPA_0589 PWY-5690 TCA cycle II (plants and fungi) YPA_0589 PWY-6728 methylaspartate cycle YPA_0589 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) YPA_0589 PWY-7254 TCA cycle VII (acetate-producers) YPA_0589 PWY-7279 aerobic respiration II (cytochrome c) (yeast) YPA_0590 PWY-3781 aerobic respiration I (cytochrome c) YPA_0590 PWY-4302 aerobic respiration III (alternative oxidase pathway) YPA_0590 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation YPA_0590 PWY-5690 TCA cycle II (plants and fungi) YPA_0590 PWY-6728 methylaspartate cycle YPA_0590 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) YPA_0590 PWY-7254 TCA cycle VII (acetate-producers) YPA_0590 PWY-7279 aerobic respiration II (cytochrome c) (yeast) YPA_0591 PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA YPA_0592 PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA YPA_0593 PWY-5392 reductive TCA cycle II YPA_0593 PWY-5537 pyruvate fermentation to acetate V YPA_0593 PWY-5538 pyruvate fermentation to acetate VI YPA_0593 PWY-5690 TCA cycle II (plants and fungi) YPA_0593 PWY-5913 TCA cycle VI (obligate autotrophs) YPA_0593 PWY-6728 methylaspartate cycle YPA_0593 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) YPA_0593 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) YPA_0594 PWY-5392 reductive TCA cycle II YPA_0594 PWY-5537 pyruvate fermentation to acetate V YPA_0594 PWY-5538 pyruvate fermentation to acetate VI YPA_0594 PWY-5690 TCA cycle II (plants and fungi) YPA_0594 PWY-5913 TCA cycle VI (obligate autotrophs) YPA_0594 PWY-6728 methylaspartate cycle YPA_0594 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) YPA_0594 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) YPA_0605 PWY-5316 nicotine biosynthesis YPA_0605 PWY-7342 superpathway of nicotine biosynthesis YPA_0608 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I YPA_0608 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) YPA_0608 PWY-6164 3-dehydroquinate biosynthesis I YPA_0611 PWY-5265 peptidoglycan biosynthesis II (staphylococci) YPA_0611 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) YPA_0614 PWY-7180 2'-deoxy-α-D-ribose 1-phosphate degradation YPA_0632 PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis YPA_0632 PWY-5957 L-nicotianamine biosynthesis YPA_0640 PWY-3461 L-tyrosine biosynthesis II YPA_0640 PWY-3462 L-phenylalanine biosynthesis II YPA_0640 PWY-6120 L-tyrosine biosynthesis III YPA_0640 PWY-6627 salinosporamide A biosynthesis YPA_0669 PWY-6281 L-selenocysteine biosynthesis II (archaea and eukaryotes) YPA_0674 PWY-5480 pyruvate fermentation to ethanol I YPA_0674 PWY-5485 pyruvate fermentation to acetate IV YPA_0674 PWY-5493 reductive monocarboxylic acid cycle YPA_0681 PWY-6163 chorismate biosynthesis from 3-dehydroquinate YPA_0682 PWY-7205 CMP phosphorylation YPA_0694 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I YPA_0694 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) YPA_0704 PWY-5913 TCA cycle VI (obligate autotrophs) YPA_0704 PWY-6318 L-phenylalanine degradation IV (mammalian, via side chain) YPA_0704 PWY-6638 sulfolactate degradation III YPA_0704 PWY-6642 (R)-cysteate degradation YPA_0704 PWY-6643 coenzyme M biosynthesis II YPA_0704 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type YPA_0704 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type YPA_0704 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) YPA_0708 PWY-5381 pyridine nucleotide cycling (plants) YPA_0710 PWY-5686 UMP biosynthesis YPA_0723 PWY-5971 palmitate biosynthesis II (bacteria and plants) YPA_0723 PWY-5973 cis-vaccenate biosynthesis YPA_0723 PWY-5989 stearate biosynthesis II (bacteria and plants) YPA_0723 PWY-5994 palmitate biosynthesis I (animals and fungi) YPA_0723 PWY-6113 superpathway of mycolate biosynthesis YPA_0723 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) YPA_0723 PWY-6519 8-amino-7-oxononanoate biosynthesis I YPA_0723 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) YPA_0723 PWYG-321 mycolate biosynthesis YPA_0744 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) YPA_0744 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) YPA_0747 PWY-5971 palmitate biosynthesis II (bacteria and plants) YPA_0747 PWY-5973 cis-vaccenate biosynthesis YPA_0747 PWY-5989 stearate biosynthesis II (bacteria and plants) YPA_0747 PWY-5994 palmitate biosynthesis I (animals and fungi) YPA_0747 PWY-6113 superpathway of mycolate biosynthesis YPA_0747 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) YPA_0747 PWY-6519 8-amino-7-oxononanoate biosynthesis I YPA_0747 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) YPA_0747 PWYG-321 mycolate biosynthesis YPA_0750 PWY-6174 mevalonate pathway II (archaea) YPA_0750 PWY-7391 isoprene biosynthesis II (engineered) YPA_0750 PWY-7524 mevalonate pathway III (archaea) YPA_0750 PWY-922 mevalonate pathway I YPA_0756 PWY-4381 fatty acid biosynthesis initiation I YPA_0756 PWY-6799 fatty acid biosynthesis (plant mitochondria) YPA_0756 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) YPA_0790 PWY-6823 molybdenum cofactor biosynthesis YPA_0791 PWY-6823 molybdenum cofactor biosynthesis YPA_0796 PWY-1801 formaldehyde oxidation II (glutathione-dependent) YPA_0797 PWY-1801 formaldehyde oxidation II (glutathione-dependent) YPA_0797 PWY-3162 L-tryptophan degradation V (side chain pathway) YPA_0797 PWY-5057 L-valine degradation II YPA_0797 PWY-5076 L-leucine degradation III YPA_0797 PWY-5078 L-isoleucine degradation II YPA_0797 PWY-5079 L-phenylalanine degradation III YPA_0797 PWY-5082 L-methionine degradation III YPA_0797 PWY-5480 pyruvate fermentation to ethanol I YPA_0797 PWY-5486 pyruvate fermentation to ethanol II YPA_0797 PWY-5751 phenylethanol biosynthesis YPA_0797 PWY-6028 acetoin degradation YPA_0797 PWY-6313 serotonin degradation YPA_0797 PWY-6333 acetaldehyde biosynthesis I YPA_0797 PWY-6342 noradrenaline and adrenaline degradation YPA_0797 PWY-6587 pyruvate fermentation to ethanol III YPA_0797 PWY-6802 salidroside biosynthesis YPA_0797 PWY-6871 3-methylbutanol biosynthesis YPA_0797 PWY-7013 L-1,2-propanediol degradation YPA_0797 PWY-7111 pyruvate fermentation to isobutanol (engineered) YPA_0797 PWY-7118 chitin degradation to ethanol YPA_0797 PWY-7396 butanol and isobutanol biosynthesis (engineered) YPA_0797 PWY-7557 dehydrodiconiferyl alcohol degradation YPA_0800 PWY-5663 tetrahydrobiopterin biosynthesis I YPA_0800 PWY-5664 tetrahydrobiopterin biosynthesis II YPA_0800 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I YPA_0800 PWY-6703 preQ0 biosynthesis YPA_0800 PWY-6983 tetrahydrobiopterin biosynthesis III YPA_0800 PWY-7442 drosopterin and aurodrosopterin biosynthesis YPA_0807 PWY-6556 pyrimidine ribonucleosides salvage II YPA_0807 PWY-7181 pyrimidine deoxyribonucleosides degradation YPA_0807 PWY-7193 pyrimidine ribonucleosides salvage I YPA_0807 PWY-7199 pyrimidine deoxyribonucleosides salvage YPA_0818 PWY-7193 pyrimidine ribonucleosides salvage I YPA_0819 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II YPA_0834 PWY-3801 sucrose degradation II (sucrose synthase) YPA_0834 PWY-6527 stachyose degradation YPA_0834 PWY-6981 chitin biosynthesis YPA_0834 PWY-7238 sucrose biosynthesis II YPA_0834 PWY-7343 UDP-glucose biosynthesis YPA_0835 PWY-3801 sucrose degradation II (sucrose synthase) YPA_0835 PWY-6527 stachyose degradation YPA_0835 PWY-6981 chitin biosynthesis YPA_0835 PWY-7238 sucrose biosynthesis II YPA_0835 PWY-7343 UDP-glucose biosynthesis YPA_0851 PWY-6349 CDP-archaeol biosynthesis YPA_0865 PWY-4983 L-citrulline-nitric oxide cycle YPA_0865 PWY-4984 urea cycle YPA_0865 PWY-5 canavanine biosynthesis YPA_0865 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) YPA_0865 PWY-7400 L-arginine biosynthesis IV (archaebacteria) YPA_0866 PWY-4983 L-citrulline-nitric oxide cycle YPA_0866 PWY-4984 urea cycle YPA_0866 PWY-5 canavanine biosynthesis YPA_0866 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) YPA_0866 PWY-7400 L-arginine biosynthesis IV (archaebacteria) YPA_0876 PWY-6012 acyl carrier protein metabolism I YPA_0876 PWY-6012-1 acyl carrier protein metabolism II (mammalian) YPA_0878 PWY-6527 stachyose degradation YPA_0888 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) YPA_0888 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) YPA_0888 PWY-6454 vancomycin resistance I YPA_0888 PWY-6901 superpathway of glucose and xylose degradation YPA_0906 PWY-5350 thiosulfate disproportionation III (rhodanese) YPA_0921 PWY-5506 methanol oxidation to formaldehyde IV YPA_0927 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III YPA_0927 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I YPA_0927 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV YPA_0927 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP YPA_0927 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II YPA_0927 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II YPA_0927 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I YPA_0927 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis YPA_0928 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III YPA_0928 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I YPA_0928 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV YPA_0928 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP YPA_0928 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II YPA_0928 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II YPA_0928 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I YPA_0928 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis YPA_0929 PWY-5855 ubiquinol-7 biosynthesis (prokaryotic) YPA_0929 PWY-5856 ubiquinol-9 biosynthesis (prokaryotic) YPA_0929 PWY-5857 ubiquinol-10 biosynthesis (prokaryotic) YPA_0929 PWY-5870 ubiquinol-8 biosynthesis (eukaryotic) YPA_0929 PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) YPA_0929 PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) YPA_0929 PWY-5873 ubiquinol-7 biosynthesis (eukaryotic) YPA_0929 PWY-6708 ubiquinol-8 biosynthesis (prokaryotic) YPA_0929 PWY-7230 ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic) YPA_0929 PWY-7233 ubiquinol-6 bypass biosynthesis (eukaryotic) YPA_0999 PWY-7242 D-fructuronate degradation YPA_1009 PWY-4261 glycerol degradation I YPA_1010 PWY-1861 formaldehyde assimilation II (RuMP Cycle) YPA_1010 PWY-5723 Rubisco shunt YPA_1017 PWY-7310 D-glucosaminate degradation YPA_1040 PWY-6164 3-dehydroquinate biosynthesis I YPA_1041 PWY-1622 formaldehyde assimilation I (serine pathway) YPA_1041 PWY-5484 glycolysis II (from fructose 6-phosphate) YPA_1043 PWY-2723 trehalose degradation V YPA_1043 PWY-6317 galactose degradation I (Leloir pathway) YPA_1043 PWY-6737 starch degradation V YPA_1045 PWY-3821 galactose degradation III YPA_1045 PWY-6317 galactose degradation I (Leloir pathway) YPA_1045 PWY-6527 stachyose degradation YPA_1046 PWY-6317 galactose degradation I (Leloir pathway) YPA_1046 PWY-6527 stachyose degradation YPA_1047 PWY-3821 galactose degradation III YPA_1047 PWY-6317 galactose degradation I (Leloir pathway) YPA_1047 PWY-6397 mycolyl-arabinogalactan-peptidoglycan complex biosynthesis YPA_1047 PWY-6527 stachyose degradation YPA_1047 PWY-7328 superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis YPA_1047 PWY-7344 UDP-D-galactose biosynthesis YPA_1058 PWY-7380 biotin biosynthesis from 8-amino-7-oxononanoate II YPA_1059 PWY-6519 8-amino-7-oxononanoate biosynthesis I YPA_1059 PWY-6578 8-amino-7-oxononanoate biosynthesis III YPA_1059 PWY-7147 8-amino-7-oxononanoate biosynthesis II YPA_1060 PWY-6519 8-amino-7-oxononanoate biosynthesis I YPA_1061 PWY-7380 biotin biosynthesis from 8-amino-7-oxononanoate II YPA_1066 PWY-6823 molybdenum cofactor biosynthesis YPA_1069 PWY-6823 molybdenum cofactor biosynthesis YPA_1073 PWY-3722 glycine betaine biosynthesis II (Gram-positive bacteria) YPA_1073 PWY-7494 choline degradation IV YPA_1074 PWY-3722 glycine betaine biosynthesis II (Gram-positive bacteria) YPA_1074 PWY-7494 choline degradation IV YPA_1079 PWY-4202 arsenate detoxification I (glutaredoxin) YPA_1079 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation YPA_1079 PWY-6608 guanosine nucleotides degradation III YPA_1079 PWY-6609 adenine and adenosine salvage III YPA_1079 PWY-6611 adenine and adenosine salvage V YPA_1079 PWY-6620 guanine and guanosine salvage YPA_1079 PWY-6627 salinosporamide A biosynthesis YPA_1079 PWY-6644 fluoroacetate and fluorothreonine biosynthesis YPA_1079 PWY-7179 purine deoxyribonucleosides degradation I YPA_1079 PWY-7179-1 purine deoxyribonucleosides degradation YPA_1130 PWY-7310 D-glucosaminate degradation YPA_1141 PWY-7431 aromatic biogenic amine degradation (bacteria) YPA_1145 PWY-5958 acridone alkaloid biosynthesis YPA_1145 PWY-6543 4-aminobenzoate biosynthesis YPA_1145 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis YPA_1145 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis YPA_1145 PWY-6722 candicidin biosynthesis YPA_1203 PWY-7219 adenosine ribonucleotides de novo biosynthesis YPA_1229 PWY-5737 (5R)-carbapenem carboxylate biosynthesis YPA_1229 PWY-6853 ethylene biosynthesis II (microbes) YPA_1229 PWY-6922 L-Nδ-acetylornithine biosynthesis YPA_1236 PWY-6785 hydrogen production VIII YPA_1245 PWY-5269 cardiolipin biosynthesis II YPA_1245 PWY-5668 cardiolipin biosynthesis I YPA_1294 PWY-3461 L-tyrosine biosynthesis II YPA_1294 PWY-3462 L-phenylalanine biosynthesis II YPA_1294 PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) YPA_1294 PWY-5837 1,4-dihydroxy-2-naphthoate biosynthesis I YPA_1294 PWY-5901 2,3-dihydroxybenzoate biosynthesis YPA_1294 PWY-6120 L-tyrosine biosynthesis III YPA_1294 PWY-6406 salicylate biosynthesis I YPA_1294 PWY-6627 salinosporamide A biosynthesis YPA_1354 PWY-5028 L-histidine degradation II YPA_1354 PWY-5030 L-histidine degradation III YPA_1359 PWY-4381 fatty acid biosynthesis initiation I YPA_1360 PWY-4381 fatty acid biosynthesis initiation I YPA_1365 PWY-5129 sphingolipid biosynthesis (plants) YPA_1367 PWY-5265 peptidoglycan biosynthesis II (staphylococci) YPA_1367 PWY-6385 peptidoglycan biosynthesis III (mycobacteria) YPA_1367 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) YPA_1367 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) YPA_1398 PWY-7560 methylerythritol phosphate pathway II YPA_1400 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) YPA_1405 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I YPA_1405 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) YPA_1447 PWY-1042 glycolysis IV (plant cytosol) YPA_1447 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) YPA_1447 PWY-5484 glycolysis II (from fructose 6-phosphate) YPA_1447 PWY-5723 Rubisco shunt YPA_1447 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) YPA_1447 PWY-6886 1-butanol autotrophic biosynthesis YPA_1447 PWY-6901 superpathway of glucose and xylose degradation YPA_1447 PWY-7003 glycerol degradation to butanol YPA_1447 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) YPA_1447 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) YPA_1449 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) YPA_1450 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) YPA_1450 PWY-6507 4-deoxy-L-threo-hex-4-enopyranuronate degradation YPA_1450 PWY-7242 D-fructuronate degradation YPA_1450 PWY-7310 D-glucosaminate degradation YPA_1498 PWY-6823 molybdenum cofactor biosynthesis YPA_1498 PWY-6891 thiazole biosynthesis II (Bacillus) YPA_1498 PWY-6892 thiazole biosynthesis I (E. coli) YPA_1498 PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis YPA_1513 PWY-2723 trehalose degradation V YPA_1513 PWY-5384 sucrose degradation IV (sucrose phosphorylase) YPA_1513 PWY-5661 GDP-glucose biosynthesis YPA_1513 PWY-5940 streptomycin biosynthesis YPA_1513 PWY-621 sucrose degradation III (sucrose invertase) YPA_1513 PWY-622 starch biosynthesis YPA_1513 PWY-6731 starch degradation III YPA_1513 PWY-6737 starch degradation V YPA_1513 PWY-6981 chitin biosynthesis YPA_1513 PWY-7238 sucrose biosynthesis II YPA_1513 PWY-7343 UDP-glucose biosynthesis YPA_1514 PWY-1042 glycolysis IV (plant cytosol) YPA_1514 PWY-5484 glycolysis II (from fructose 6-phosphate) YPA_1514 PWY-6901 superpathway of glucose and xylose degradation YPA_1514 PWY-7003 glycerol degradation to butanol YPA_1521 PWY-6281 L-selenocysteine biosynthesis II (archaea and eukaryotes) YPA_1529 PWY-2201 folate transformations I YPA_1529 PWY-5497 purine nucleobases degradation II (anaerobic) YPA_1532 PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) YPA_1534 PWY-7199 pyrimidine deoxyribonucleosides salvage YPA_1537 PWY-3162 L-tryptophan degradation V (side chain pathway) YPA_1537 PWY-5057 L-valine degradation II YPA_1537 PWY-5076 L-leucine degradation III YPA_1537 PWY-5078 L-isoleucine degradation II YPA_1537 PWY-5079 L-phenylalanine degradation III YPA_1537 PWY-5082 L-methionine degradation III YPA_1537 PWY-5162 2-oxopentenoate degradation YPA_1537 PWY-5436 L-threonine degradation IV YPA_1537 PWY-5480 pyruvate fermentation to ethanol I YPA_1537 PWY-5486 pyruvate fermentation to ethanol II YPA_1537 PWY-5751 phenylethanol biosynthesis YPA_1537 PWY-6028 acetoin degradation YPA_1537 PWY-6313 serotonin degradation YPA_1537 PWY-6333 acetaldehyde biosynthesis I YPA_1537 PWY-6342 noradrenaline and adrenaline degradation YPA_1537 PWY-6587 pyruvate fermentation to ethanol III YPA_1537 PWY-6802 salidroside biosynthesis YPA_1537 PWY-6871 3-methylbutanol biosynthesis YPA_1537 PWY-7013 L-1,2-propanediol degradation YPA_1537 PWY-7085 triethylamine degradation YPA_1537 PWY-7111 pyruvate fermentation to isobutanol (engineered) YPA_1537 PWY-7118 chitin degradation to ethanol YPA_1537 PWY-7180 2'-deoxy-α-D-ribose 1-phosphate degradation YPA_1537 PWY-7396 butanol and isobutanol biosynthesis (engineered) YPA_1537 PWY-7557 dehydrodiconiferyl alcohol degradation YPA_1567 PWY-5958 acridone alkaloid biosynthesis YPA_1567 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis YPA_1567 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis YPA_1568 PWY-5958 acridone alkaloid biosynthesis YPA_1568 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis YPA_1568 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis YPA_1572 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II YPA_1572 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I YPA_1572 PWY-6268 adenosylcobalamin salvage from cobalamin YPA_1572 PWY-6269 adenosylcobalamin salvage from cobinamide II YPA_1581 PWY-6168 flavin biosynthesis III (fungi) YPA_1581 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) YPA_1587 PWY-5686 UMP biosynthesis YPA_1590 PWY-6961 L-ascorbate degradation II (bacterial, aerobic) YPA_1592 PWY-1861 formaldehyde assimilation II (RuMP Cycle) YPA_1592 PWY-5723 Rubisco shunt YPA_1623 PWY-3861 mannitol degradation II YPA_1623 PWY-3881 mannitol biosynthesis YPA_1623 PWY-5659 GDP-mannose biosynthesis YPA_1623 PWY-7456 mannan degradation YPA_1623 PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) YPA_1624 PWY-5392 reductive TCA cycle II YPA_1624 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation YPA_1624 PWY-5690 TCA cycle II (plants and fungi) YPA_1624 PWY-5913 TCA cycle VI (obligate autotrophs) YPA_1624 PWY-6728 methylaspartate cycle YPA_1624 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) YPA_1624 PWY-7254 TCA cycle VII (acetate-producers) YPA_1624 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) YPA_1629 PWY-7380 biotin biosynthesis from 8-amino-7-oxononanoate II YPA_1637 PWY-6617 adenosine nucleotides degradation III YPA_1642 PWY-5101 L-isoleucine biosynthesis II YPA_1642 PWY-5103 L-isoleucine biosynthesis III YPA_1642 PWY-5104 L-isoleucine biosynthesis IV YPA_1642 PWY-5938 (R)-acetoin biosynthesis I YPA_1642 PWY-5939 (R)-acetoin biosynthesis II YPA_1642 PWY-6389 (S)-acetoin biosynthesis YPA_1642 PWY-7111 pyruvate fermentation to isobutanol (engineered) YPA_1647 PWY-5491 diethylphosphate degradation YPA_1714 PWY-7204 pyridoxal 5'-phosphate salvage II (plants) YPA_1714 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) YPA_1716 PWY-7204 pyridoxal 5'-phosphate salvage II (plants) YPA_1716 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) YPA_1727 PWY-5386 methylglyoxal degradation I YPA_1731 PWY-6854 ethylene biosynthesis III (microbes) YPA_1736 PWY-6167 flavin biosynthesis II (archaea) YPA_1736 PWY-6168 flavin biosynthesis III (fungi) YPA_1736 PWY-7219 adenosine ribonucleotides de novo biosynthesis YPA_1738 PWY-1042 glycolysis IV (plant cytosol) YPA_1738 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) YPA_1738 PWY-5484 glycolysis II (from fructose 6-phosphate) YPA_1738 PWY-5723 Rubisco shunt YPA_1738 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) YPA_1738 PWY-6886 1-butanol autotrophic biosynthesis YPA_1738 PWY-6901 superpathway of glucose and xylose degradation YPA_1738 PWY-7003 glycerol degradation to butanol YPA_1738 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) YPA_1738 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) YPA_1745 PWY-6823 molybdenum cofactor biosynthesis YPA_1745 PWY-6891 thiazole biosynthesis II (Bacillus) YPA_1745 PWY-6892 thiazole biosynthesis I (E. coli) YPA_1745 PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis YPA_1750 PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) YPA_1750 PWY-5837 1,4-dihydroxy-2-naphthoate biosynthesis I YPA_1751 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) YPA_1751 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) YPA_1753 PWY-5484 glycolysis II (from fructose 6-phosphate) YPA_1755 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I YPA_1755 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) YPA_1755 PWY-6164 3-dehydroquinate biosynthesis I YPA_1758 PWY-6984 lipoate salvage II YPA_1758 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) YPA_1758 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) YPA_1793 PWY-6507 4-deoxy-L-threo-hex-4-enopyranuronate degradation YPA_1794 PWY-6507 4-deoxy-L-threo-hex-4-enopyranuronate degradation YPA_1835 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) YPA_1868 PWY-6807 xyloglucan degradation II (exoglucanase) YPA_1883 PWY-5913 TCA cycle VI (obligate autotrophs) YPA_1883 PWY-6549 L-glutamine biosynthesis III YPA_1883 PWY-6728 methylaspartate cycle YPA_1883 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) YPA_1883 PWY-7124 ethylene biosynthesis V (engineered) YPA_1883 PWY-7254 TCA cycle VII (acetate-producers) YPA_1883 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) YPA_1888 PWY-6123 inosine-5'-phosphate biosynthesis I YPA_1888 PWY-6124 inosine-5'-phosphate biosynthesis II YPA_1888 PWY-7219 adenosine ribonucleotides de novo biosynthesis YPA_1888 PWY-7234 inosine-5'-phosphate biosynthesis III YPA_1907 PWY-6902 chitin degradation II YPA_1908 PWY-6896 thiamin salvage I YPA_1912 PWY-6163 chorismate biosynthesis from 3-dehydroquinate YPA_1917 PWY-7310 D-glucosaminate degradation YPA_1920 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III YPA_1920 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I YPA_1920 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II YPA_1920 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation YPA_1920 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV YPA_1920 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP YPA_1922 PWY-6543 4-aminobenzoate biosynthesis YPA_1922 PWY-6722 candicidin biosynthesis YPA_1926 PWY-5367 petroselinate biosynthesis YPA_1926 PWY-5971 palmitate biosynthesis II (bacteria and plants) YPA_1926 PWY-5973 cis-vaccenate biosynthesis YPA_1926 PWY-5989 stearate biosynthesis II (bacteria and plants) YPA_1926 PWY-5994 palmitate biosynthesis I (animals and fungi) YPA_1926 PWY-6113 superpathway of mycolate biosynthesis YPA_1926 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) YPA_1926 PWY-6519 8-amino-7-oxononanoate biosynthesis I YPA_1926 PWY-6951 YPA_1926 YPA_1926 PWY-7053 docosahexaenoate biosynthesis I (lower eukaryotes) YPA_1926 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) YPA_1926 PWYG-321 mycolate biosynthesis YPA_1927 PWY-4381 fatty acid biosynthesis initiation I YPA_1927 PWY-6799 fatty acid biosynthesis (plant mitochondria) YPA_1927 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) YPA_1928 PWY-4381 fatty acid biosynthesis initiation I YPA_1940 PWY-5686 UMP biosynthesis YPA_1954 PWY-6157 autoinducer AI-1 biosynthesis YPA_1958 PWY-1723 formaldehyde oxidation V (H4MPT pathway) YPA_1958 PWY-1861 formaldehyde assimilation II (RuMP Cycle) YPA_1975 PWY-6749 CMP-legionaminate biosynthesis I YPA_2015 PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) YPA_2015 PWY-5837 1,4-dihydroxy-2-naphthoate biosynthesis I YPA_2016 PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) YPA_2016 PWY-5837 1,4-dihydroxy-2-naphthoate biosynthesis I YPA_2017 PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) YPA_2017 PWY-5837 1,4-dihydroxy-2-naphthoate biosynthesis I YPA_2018 PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) YPA_2018 PWY-5837 1,4-dihydroxy-2-naphthoate biosynthesis I YPA_2019 PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) YPA_2019 PWY-5837 1,4-dihydroxy-2-naphthoate biosynthesis I YPA_2020 PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) YPA_2020 PWY-5837 1,4-dihydroxy-2-naphthoate biosynthesis I YPA_2020 PWY-5901 2,3-dihydroxybenzoate biosynthesis YPA_2020 PWY-6406 salicylate biosynthesis I YPA_2025 PWY-5101 L-isoleucine biosynthesis II YPA_2025 PWY-5103 L-isoleucine biosynthesis III YPA_2025 PWY-5104 L-isoleucine biosynthesis IV YPA_2025 PWY-7111 pyruvate fermentation to isobutanol (engineered) YPA_2032 PWY-5530 sorbitol biosynthesis II YPA_2032 PWY-6163 chorismate biosynthesis from 3-dehydroquinate YPA_2055 PWY-5482 pyruvate fermentation to acetate II YPA_2055 PWY-5485 pyruvate fermentation to acetate IV YPA_2055 PWY-5497 purine nucleobases degradation II (anaerobic) YPA_2056 PWY-1281 sulfoacetaldehyde degradation I YPA_2056 PWY-5482 pyruvate fermentation to acetate II YPA_2056 PWY-5485 pyruvate fermentation to acetate IV YPA_2056 PWY-5497 purine nucleobases degradation II (anaerobic) YPA_2056 PWY-6637 sulfolactate degradation II YPA_2059 PWY-7310 D-glucosaminate degradation YPA_2072 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I YPA_2072 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II YPA_2072 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis YPA_2072 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) YPA_2075 PWY-2161 folate polyglutamylation YPA_2076 PWY-4381 fatty acid biosynthesis initiation I YPA_2076 PWY-5743 3-hydroxypropanoate cycle YPA_2076 PWY-5744 glyoxylate assimilation YPA_2076 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle YPA_2076 PWY-6679 jadomycin biosynthesis YPA_2076 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) YPA_2079 PWY-2941 L-lysine biosynthesis II YPA_2079 PWY-2942 L-lysine biosynthesis III YPA_2079 PWY-5097 L-lysine biosynthesis VI YPA_2079 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) YPA_2079 PWY-6559 spermidine biosynthesis II YPA_2079 PWY-6562 norspermidine biosynthesis YPA_2079 PWY-7153 grixazone biosynthesis YPA_2079 PWY-7400 L-arginine biosynthesis IV (archaebacteria) YPA_2085 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) YPA_2085 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) YPA_2092 PWY-6163 chorismate biosynthesis from 3-dehydroquinate YPA_2097 PWY-1361 benzoyl-CoA degradation I (aerobic) YPA_2097 PWY-5109 2-methylbutanoate biosynthesis YPA_2097 PWY-5136 fatty acid β-oxidation II (peroxisome) YPA_2097 PWY-5138 unsaturated, even numbered fatty acid β-oxidation YPA_2097 PWY-5177 glutaryl-CoA degradation YPA_2097 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle YPA_2097 PWY-6435 4-hydroxybenzoate biosynthesis V YPA_2097 PWY-6583 pyruvate fermentation to butanol I YPA_2097 PWY-6863 pyruvate fermentation to hexanol YPA_2097 PWY-6883 pyruvate fermentation to butanol II YPA_2097 PWY-6944 androstenedione degradation YPA_2097 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) YPA_2097 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) YPA_2097 PWY-7007 methyl ketone biosynthesis YPA_2097 PWY-7046 4-coumarate degradation (anaerobic) YPA_2097 PWY-7094 fatty acid salvage YPA_2097 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis YPA_2097 PWY-735 jasmonic acid biosynthesis YPA_2097 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) YPA_2098 PWY-5136 fatty acid β-oxidation II (peroxisome) YPA_2098 PWY-6435 4-hydroxybenzoate biosynthesis V YPA_2098 PWY-6863 pyruvate fermentation to hexanol YPA_2098 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) YPA_2098 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) YPA_2098 PWY-6948 sitosterol degradation to androstenedione YPA_2098 PWY-7094 fatty acid salvage YPA_2098 PWY-7288 fatty acid β-oxidation (peroxisome, yeast) YPA_2098 PWY-7337 10-cis-heptadecenoyl-CoA degradation (yeast) YPA_2098 PWY-7338 10-trans-heptadecenoyl-CoA degradation (reductase-dependent, yeast) YPA_2098 PWY-7339 10-trans-heptadecenoyl-CoA degradation (MFE-dependent, yeast) YPA_2098 PWY-7340 9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast) YPA_2098 PWY-735 jasmonic acid biosynthesis YPA_2166 PWY-2723 trehalose degradation V YPA_2166 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II YPA_2166 PWY-5661 GDP-glucose biosynthesis YPA_2166 PWY-7238 sucrose biosynthesis II YPA_2166 PWY-7385 1,3-propanediol biosynthesis (engineered) YPA_2173 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) YPA_2182 PWY-6936 seleno-amino acid biosynthesis YPA_2195 PWY-6936 seleno-amino acid biosynthesis YPA_2200 PWY-6936 seleno-amino acid biosynthesis YPA_2208 PWY-6138 CMP-N-acetylneuraminate biosynthesis I (eukaryotes) YPA_2212 PWY-2941 L-lysine biosynthesis II YPA_2212 PWY-2942 L-lysine biosynthesis III YPA_2212 PWY-5097 L-lysine biosynthesis VI YPA_2220 PWY-5531 chlorophyllide a biosynthesis II (anaerobic) YPA_2220 PWY-7159 chlorophyllide a biosynthesis III (aerobic, light independent) YPA_2222 PWY-1281 sulfoacetaldehyde degradation I YPA_2222 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type YPA_2222 PWY-5482 pyruvate fermentation to acetate II YPA_2222 PWY-5485 pyruvate fermentation to acetate IV YPA_2222 PWY-5497 purine nucleobases degradation II (anaerobic) YPA_2222 PWY-6637 sulfolactate degradation II YPA_2222 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type YPA_2250 PWY-6123 inosine-5'-phosphate biosynthesis I YPA_2250 PWY-6124 inosine-5'-phosphate biosynthesis II YPA_2250 PWY-7234 inosine-5'-phosphate biosynthesis III YPA_2253 PWY-2941 L-lysine biosynthesis II YPA_2253 PWY-2942 L-lysine biosynthesis III YPA_2253 PWY-5097 L-lysine biosynthesis VI YPA_2261 PWY-4202 arsenate detoxification I (glutaredoxin) YPA_2261 PWY-4621 arsenate detoxification II (glutaredoxin) YPA_2264 PWY-7183 pyrimidine nucleobases salvage I YPA_2265 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I YPA_2265 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II YPA_2265 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis YPA_2266 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I YPA_2266 PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate YPA_2299 PWY-6910 hydroxymethylpyrimidine salvage YPA_2299 PWY-7356 thiamin salvage IV (yeast) YPA_2299 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) YPA_2311 PWY-7221 guanosine ribonucleotides de novo biosynthesis YPA_2312 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation YPA_2312 PWY-6596 adenosine nucleotides degradation I YPA_2312 PWY-7221 guanosine ribonucleotides de novo biosynthesis YPA_2319 PWY-7560 methylerythritol phosphate pathway II YPA_2323 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III YPA_2323 PWY-7176 UTP and CTP de novo biosynthesis YPA_2323 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I YPA_2323 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II YPA_2323 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation YPA_2323 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV YPA_2323 PWY-7205 CMP phosphorylation YPA_2323 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP YPA_2323 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II YPA_2323 PWY-7221 guanosine ribonucleotides de novo biosynthesis YPA_2323 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II YPA_2323 PWY-7224 purine deoxyribonucleosides salvage YPA_2323 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I YPA_2323 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis YPA_2330 PWY-5988 wound-induced proteolysis I YPA_2330 PWY-6018 seed germination protein turnover YPA_2337 PWY-6823 molybdenum cofactor biosynthesis YPA_2337 PWY-6891 thiazole biosynthesis II (Bacillus) YPA_2337 PWY-6892 thiazole biosynthesis I (E. coli) YPA_2337 PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis YPA_2340 PWY-2301 myo-inositol biosynthesis YPA_2340 PWY-4702 phytate degradation I YPA_2340 PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation YPA_2347 PWY-1622 formaldehyde assimilation I (serine pathway) YPA_2347 PWY-181 photorespiration YPA_2347 PWY-2161 folate polyglutamylation YPA_2347 PWY-2201 folate transformations I YPA_2347 PWY-3661 glycine betaine degradation I YPA_2347 PWY-3661-1 glycine betaine degradation II (mammalian) YPA_2347 PWY-3841 folate transformations II YPA_2347 PWY-5497 purine nucleobases degradation II (anaerobic) YPA_2360 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I YPA_2360 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II YPA_2360 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis YPA_2363 PWY-5269 cardiolipin biosynthesis II YPA_2363 PWY-5668 cardiolipin biosynthesis I YPA_2368 PWY-6012 acyl carrier protein metabolism I YPA_2368 PWY-6012-1 acyl carrier protein metabolism II (mammalian) YPA_2376 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III YPA_2376 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I YPA_2376 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV YPA_2376 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP YPA_2376 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II YPA_2376 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II YPA_2376 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I YPA_2376 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis YPA_2377 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III YPA_2377 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I YPA_2377 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV YPA_2377 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP YPA_2377 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II YPA_2377 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II YPA_2377 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I YPA_2377 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis YPA_2392 PWY-5704 urea degradation II YPA_2393 PWY-5704 urea degradation II YPA_2394 PWY-5704 urea degradation II YPA_2407 PWY-7310 D-glucosaminate degradation YPA_2408 PWY-7310 D-glucosaminate degradation YPA_2414 PWY-2723 trehalose degradation V YPA_2414 PWY-3801 sucrose degradation II (sucrose synthase) YPA_2414 PWY-5384 sucrose degradation IV (sucrose phosphorylase) YPA_2414 PWY-5661 GDP-glucose biosynthesis YPA_2414 PWY-5661-1 YPA_2414 YPA_2414 PWY-5940 streptomycin biosynthesis YPA_2414 PWY-5941 glycogen degradation II (eukaryotic) YPA_2414 PWY-622 starch biosynthesis YPA_2414 PWY-6731 starch degradation III YPA_2414 PWY-6737 starch degradation V YPA_2414 PWY-6749 CMP-legionaminate biosynthesis I YPA_2414 PWY-7238 sucrose biosynthesis II YPA_2414 PWY-7343 UDP-glucose biosynthesis YPA_2428 PWY-5663 tetrahydrobiopterin biosynthesis I YPA_2428 PWY-5664 tetrahydrobiopterin biosynthesis II YPA_2428 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I YPA_2428 PWY-6703 preQ0 biosynthesis YPA_2428 PWY-6983 tetrahydrobiopterin biosynthesis III YPA_2428 PWY-7442 drosopterin and aurodrosopterin biosynthesis YPA_2444 PWY-5316 nicotine biosynthesis YPA_2444 PWY-7342 superpathway of nicotine biosynthesis YPA_2464 PWY-6902 chitin degradation II YPA_2465 PWY-6902 chitin degradation II YPA_2467 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) YPA_2469 PWY-7310 D-glucosaminate degradation YPA_2470 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II YPA_2470 PWY-6855 chitin degradation I (archaea) YPA_2470 PWY-6906 chitin derivatives degradation YPA_2471 PWY-6906 chitin derivatives degradation YPA_2471 PWY-7077 N-acetyl-D-galactosamine degradation YPA_2471 PWY-7395 D-galactosamine and N-acetyl-D-galactosamine degradation YPA_2490 PWY-5381 pyridine nucleotide cycling (plants) YPA_2490 PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde YPA_2498 PWY-5265 peptidoglycan biosynthesis II (staphylococci) YPA_2498 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) YPA_2500 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) YPA_2500 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) YPA_2501 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) YPA_2501 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) YPA_2501 PWY-7382 lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast) YPA_2513 PWY-6507 4-deoxy-L-threo-hex-4-enopyranuronate degradation YPA_2524 PWY-5642 2,4-dinitrotoluene degradation YPA_2524 PWY-6373 acrylate degradation YPA_2565 PWY-1722 formate reduction to 5,10-methylenetetrahydrofolate YPA_2565 PWY-2201 folate transformations I YPA_2565 PWY-3841 folate transformations II YPA_2565 PWY-5030 L-histidine degradation III YPA_2565 PWY-5497 purine nucleobases degradation II (anaerobic) YPA_2565 PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate YPA_2571 PWY-6123 inosine-5'-phosphate biosynthesis I YPA_2571 PWY-7234 inosine-5'-phosphate biosynthesis III YPA_2592 PWY-6749 CMP-legionaminate biosynthesis I YPA_2594 PWY-5659 GDP-mannose biosynthesis YPA_2594 PWY-6073 alginate biosynthesis I (algal) YPA_2594 PWY-6082 alginate biosynthesis II (bacterial) YPA_2594 PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) YPA_2595 PWY-66 GDP-L-fucose biosynthesis I (from GDP-D-mannose) YPA_2606 PWY-5833 CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis YPA_2608 PWY-5833 CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis YPA_2608 PWY-5940 streptomycin biosynthesis YPA_2611 PWY-7219 adenosine ribonucleotides de novo biosynthesis YPA_2617 PWY-6605 adenine and adenosine salvage II YPA_2617 PWY-6610 adenine and adenosine salvage IV YPA_2645 PWY-6703 preQ0 biosynthesis YPA_2659 PWY-3781 aerobic respiration I (cytochrome c) YPA_2659 PWY-4521 arsenite oxidation I (respiratory) YPA_2659 PWY-6692 Fe(II) oxidation YPA_2659 PWY-7279 aerobic respiration II (cytochrome c) (yeast) YPA_2659 PWY-7544 pyruvate to cytochrome bo oxidase electron transfer YPA_2665 PWY-6654 phosphopantothenate biosynthesis III YPA_2671 PWY-6891 thiazole biosynthesis II (Bacillus) YPA_2671 PWY-6892 thiazole biosynthesis I (E. coli) YPA_2671 PWY-7560 methylerythritol phosphate pathway II YPA_2673 PWY-5269 cardiolipin biosynthesis II YPA_2673 PWY-5668 cardiolipin biosynthesis I YPA_2674 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) YPA_2674 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) YPA_2674 PWY-6896 thiamin salvage I YPA_2674 PWY-6897 thiamin salvage II YPA_2676 PWY-6167 flavin biosynthesis II (archaea) YPA_2676 PWY-6168 flavin biosynthesis III (fungi) YPA_2686 PWY-6700 queuosine biosynthesis YPA_2687 PWY-6700 queuosine biosynthesis YPA_2688 PWY-6012 acyl carrier protein metabolism I YPA_2690 PWY-4041 γ-glutamyl cycle YPA_2690 PWY-5826 hypoglycin biosynthesis YPA_2691 PWY-4041 γ-glutamyl cycle YPA_2691 PWY-5826 hypoglycin biosynthesis YPA_2693 PWY-842 starch degradation I YPA_2707 PWY-6163 chorismate biosynthesis from 3-dehydroquinate YPA_2734 PWY-6478 GDP-D-glycero-α-D-manno-heptose biosynthesis YPA_2752 PWY-5169 cyanurate degradation YPA_2752 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation YPA_2763 PWY-5392 reductive TCA cycle II YPA_2763 PWY-5537 pyruvate fermentation to acetate V YPA_2763 PWY-5538 pyruvate fermentation to acetate VI YPA_2763 PWY-5690 TCA cycle II (plants and fungi) YPA_2763 PWY-5913 TCA cycle VI (obligate autotrophs) YPA_2763 PWY-6728 methylaspartate cycle YPA_2763 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) YPA_2763 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) YPA_2764 PWY-5269 cardiolipin biosynthesis II YPA_2764 PWY-5668 cardiolipin biosynthesis I YPA_2773 PWY-3461 L-tyrosine biosynthesis II YPA_2773 PWY-3462 L-phenylalanine biosynthesis II YPA_2773 PWY-6120 L-tyrosine biosynthesis III YPA_2773 PWY-6627 salinosporamide A biosynthesis YPA_2773 PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) YPA_2776 PWY-5194 siroheme biosynthesis YPA_2776 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) YPA_2777 PWY-5278 sulfite oxidation III YPA_2777 PWY-5340 sulfate activation for sulfonation YPA_2777 PWY-6683 sulfate reduction III (assimilatory) YPA_2777 PWY-6932 selenate reduction YPA_2778 PWY-5278 sulfite oxidation III YPA_2778 PWY-5340 sulfate activation for sulfonation YPA_2778 PWY-6683 sulfate reduction III (assimilatory) YPA_2778 PWY-6932 selenate reduction YPA_2779 PWY-5340 sulfate activation for sulfonation YPA_2782 PWY-7560 methylerythritol phosphate pathway II YPA_2783 PWY-7560 methylerythritol phosphate pathway II YPA_2785 PWY-5381 pyridine nucleotide cycling (plants) YPA_2785 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation YPA_2785 PWY-6596 adenosine nucleotides degradation I YPA_2785 PWY-6606 guanosine nucleotides degradation II YPA_2785 PWY-6607 guanosine nucleotides degradation I YPA_2785 PWY-6608 guanosine nucleotides degradation III YPA_2785 PWY-7185 UTP and CTP dephosphorylation I YPA_2809 PWY-5392 reductive TCA cycle II YPA_2809 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation YPA_2809 PWY-5690 TCA cycle II (plants and fungi) YPA_2809 PWY-5913 TCA cycle VI (obligate autotrophs) YPA_2809 PWY-6728 methylaspartate cycle YPA_2809 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) YPA_2809 PWY-7254 TCA cycle VII (acetate-producers) YPA_2809 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) YPA_2810 PWY-4261 glycerol degradation I YPA_2811 PWY-6961 L-ascorbate degradation II (bacterial, aerobic) YPA_2818 PWY-6961 L-ascorbate degradation II (bacterial, aerobic) YPA_2830 PWY-6891 thiazole biosynthesis II (Bacillus) YPA_2830 PWY-6892 thiazole biosynthesis I (E. coli) YPA_2830 PWY-7560 methylerythritol phosphate pathway II YPA_2832 PWY-4261 glycerol degradation I YPA_2843 PWY-6840 homoglutathione biosynthesis YPA_2843 PWY-7255 ergothioneine biosynthesis I (bacteria) YPA_2844 PWY-6151 S-adenosyl-L-methionine cycle I YPA_2844 PWY-6153 autoinducer AI-2 biosynthesis I YPA_2844 PWY-6154 autoinducer AI-2 biosynthesis II (Vibrio) YPA_2851 PWY-6829 tRNA methylation (yeast) YPA_2851 PWY-7285 methylwyosine biosynthesis YPA_2851 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis YPA_2859 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I YPA_2859 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) YPA_2859 PWY-6164 3-dehydroquinate biosynthesis I YPA_2860 PWY-3461 L-tyrosine biosynthesis II YPA_2860 PWY-3462 L-phenylalanine biosynthesis II YPA_2860 PWY-6120 L-tyrosine biosynthesis III YPA_2860 PWY-6627 salinosporamide A biosynthesis YPA_2860 PWY-7303 3-dimethylallyl-4-hydroxybenzoate biosynthesis YPA_2861 PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) YPA_2864 PWY-5194 siroheme biosynthesis YPA_2864 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) YPA_2869 PWY-6683 sulfate reduction III (assimilatory) YPA_2870 PWY-6683 sulfate reduction III (assimilatory) YPA_2872 PWY-6703 preQ0 biosynthesis YPA_2873 PWY-6854 ethylene biosynthesis III (microbes) YPA_2874 PWY-1042 glycolysis IV (plant cytosol) YPA_2874 PWY-1622 formaldehyde assimilation I (serine pathway) YPA_2874 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) YPA_2874 PWY-5484 glycolysis II (from fructose 6-phosphate) YPA_2874 PWY-5723 Rubisco shunt YPA_2874 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) YPA_2874 PWY-6886 1-butanol autotrophic biosynthesis YPA_2874 PWY-6901 superpathway of glucose and xylose degradation YPA_2874 PWY-7003 glycerol degradation to butanol YPA_2874 PWY-7124 ethylene biosynthesis V (engineered) YPA_2874 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) YPA_2875 PWY-7176 UTP and CTP de novo biosynthesis YPA_2875 PWY-7177 UTP and CTP dephosphorylation II YPA_2875 PWY-7185 UTP and CTP dephosphorylation I YPA_2883 PWY-6151 S-adenosyl-L-methionine cycle I YPA_2883 PWY-6153 autoinducer AI-2 biosynthesis I YPA_2883 PWY-6154 autoinducer AI-2 biosynthesis II (Vibrio) YPA_2889 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) YPA_2893 PWY-5265 peptidoglycan biosynthesis II (staphylococci) YPA_2893 PWY-6385 peptidoglycan biosynthesis III (mycobacteria) YPA_2893 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) YPA_2893 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) YPA_2901 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I YPA_2901 PWY-6148 tetrahydromethanopterin biosynthesis YPA_2901 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea) YPA_2901 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) YPA_2902 PWY-6654 phosphopantothenate biosynthesis III YPA_2904 PWY-5155 β-alanine biosynthesis III YPA_2909 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type YPA_2909 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) YPA_2909 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type YPA_2909 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type YPA_2910 PWY-6599 guanine and guanosine salvage II YPA_2910 PWY-6609 adenine and adenosine salvage III YPA_2910 PWY-6610 adenine and adenosine salvage IV YPA_2910 PWY-6620 guanine and guanosine salvage YPA_2914 PWY-6834 spermidine biosynthesis III YPA_2917 PWY-5747 2-methylcitrate cycle II YPA_2919 PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA YPA_2919 PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA YPA_2921 PWY-6891 thiazole biosynthesis II (Bacillus) YPA_2921 PWY-6892 thiazole biosynthesis I (E. coli) YPA_2921 PWY-7560 methylerythritol phosphate pathway II YPA_2926 PWY-5316 nicotine biosynthesis YPA_2926 PWY-5381 pyridine nucleotide cycling (plants) YPA_2926 PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde YPA_2926 PWY-7342 superpathway of nicotine biosynthesis YPA_2942 PWY-5988 wound-induced proteolysis I YPA_2942 PWY-6018 seed germination protein turnover YPA_2948 PWY-4981 L-proline biosynthesis II (from arginine) YPA_2948 PWY-4984 urea cycle YPA_2948 PWY-7400 L-arginine biosynthesis IV (archaebacteria) YPA_2956 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II YPA_2956 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II YPA_2956 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II YPA_2959 PWY-7399 methylphosphonate degradation II YPA_2962 PWY-7399 methylphosphonate degradation II YPA_2964 PWY-7399 methylphosphonate degradation II YPA_2965 PWY-7399 methylphosphonate degradation II YPA_2966 PWY-5532 adenosine nucleotides degradation IV YPA_2970 PWY-6986 alginate degradation YPA_2975 PWY-6986 alginate degradation YPA_2976 PWY-6986 alginate degradation YPA_2981 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) YPA_2981 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) YPA_2981 PWY-6897 thiamin salvage II YPA_2981 PWY-6907 thiamin diphosphate biosynthesis III (Staphylococcus) YPA_2981 PWY-6908 thiamin diphosphate biosynthesis IV (eukaryotes) YPA_2981 PWY-7353 4-methyl-5(β-hydroxyethyl)thiazole salvage (yeast) YPA_2981 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) YPA_3005 PWY-842 starch degradation I YPA_3006 PWY-1622 formaldehyde assimilation I (serine pathway) YPA_3014 PWY-7310 D-glucosaminate degradation YPA_3024 PWY-6854 ethylene biosynthesis III (microbes) YPA_3072 PWY-7219 adenosine ribonucleotides de novo biosynthesis YPA_3111 PWY-6936 seleno-amino acid biosynthesis YPA_3119 PWY-5667 CDP-diacylglycerol biosynthesis I YPA_3119 PWY-5981 CDP-diacylglycerol biosynthesis III YPA_3119 PWY-7411 superpathway of phosphatidate biosynthesis (yeast) YPA_3119 PWY-7417 phospholipid remodeling (phosphatidate, yeast) YPA_3133 PWY-6167 flavin biosynthesis II (archaea) YPA_3133 PWY-6168 flavin biosynthesis III (fungi) YPA_3142 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I YPA_3142 PWY-6148 tetrahydromethanopterin biosynthesis YPA_3142 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea) YPA_3142 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) YPA_3210 PWY-7247 β-D-glucuronide and D-glucuronate degradation YPA_3210 PWY-7248 pectin degradation III YPA_3226 PWY-6163 chorismate biosynthesis from 3-dehydroquinate YPA_3282 PWY-6785 hydrogen production VIII YPA_3294 PWY-5723 Rubisco shunt YPA_3300 PWY-5958 acridone alkaloid biosynthesis YPA_3300 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis YPA_3300 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis YPA_3308 PWY-6683 sulfate reduction III (assimilatory) YPA_3311 PWY-5194 siroheme biosynthesis YPA_3311 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) YPA_3313 PWY-181 photorespiration YPA_3314 PWY-1861 formaldehyde assimilation II (RuMP Cycle) YPA_3314 PWY-5723 Rubisco shunt YPA_3317 PWY-6164 3-dehydroquinate biosynthesis I YPA_3318 PWY-6163 chorismate biosynthesis from 3-dehydroquinate YPA_3331 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation YPA_3331 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type YPA_3340 PWY-6519 8-amino-7-oxononanoate biosynthesis I YPA_3343 PWY-5941 glycogen degradation II (eukaryotic) YPA_3343 PWY-6724 starch degradation II YPA_3343 PWY-6737 starch degradation V YPA_3343 PWY-7238 sucrose biosynthesis II YPA_3344 PWY-5941 glycogen degradation II (eukaryotic) YPA_3344 PWY-622 starch biosynthesis YPA_3344 PWY-6731 starch degradation III YPA_3344 PWY-6737 starch degradation V YPA_3344 PWY-7238 sucrose biosynthesis II YPA_3345 PWY-5941 glycogen degradation II (eukaryotic) YPA_3345 PWY-622 starch biosynthesis YPA_3345 PWY-6731 starch degradation III YPA_3345 PWY-6737 starch degradation V YPA_3345 PWY-7238 sucrose biosynthesis II YPA_3347 PWY-5350 thiosulfate disproportionation III (rhodanese) YPA_3427 PWY-3961 phosphopantothenate biosynthesis II YPA_3428 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) YPA_3428 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) YPA_3429 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) YPA_3429 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) YPA_3436 PWY-1361 benzoyl-CoA degradation I (aerobic) YPA_3436 PWY-5109 2-methylbutanoate biosynthesis YPA_3436 PWY-5136 fatty acid β-oxidation II (peroxisome) YPA_3436 PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) YPA_3436 PWY-5138 unsaturated, even numbered fatty acid β-oxidation YPA_3436 PWY-5177 glutaryl-CoA degradation YPA_3436 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle YPA_3436 PWY-6435 4-hydroxybenzoate biosynthesis V YPA_3436 PWY-6583 pyruvate fermentation to butanol I YPA_3436 PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) YPA_3436 PWY-6863 pyruvate fermentation to hexanol YPA_3436 PWY-6883 pyruvate fermentation to butanol II YPA_3436 PWY-6944 androstenedione degradation YPA_3436 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) YPA_3436 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) YPA_3436 PWY-7007 methyl ketone biosynthesis YPA_3436 PWY-7046 4-coumarate degradation (anaerobic) YPA_3436 PWY-7094 fatty acid salvage YPA_3436 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis YPA_3436 PWY-7291 oleate β-oxidation (isomerase-dependent, yeast) YPA_3436 PWY-735 jasmonic acid biosynthesis YPA_3436 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) YPA_3437 PWY-5136 fatty acid β-oxidation II (peroxisome) YPA_3437 PWY-6435 4-hydroxybenzoate biosynthesis V YPA_3437 PWY-6863 pyruvate fermentation to hexanol YPA_3437 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) YPA_3437 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) YPA_3437 PWY-6948 sitosterol degradation to androstenedione YPA_3437 PWY-7094 fatty acid salvage YPA_3437 PWY-7288 fatty acid β-oxidation (peroxisome, yeast) YPA_3437 PWY-7337 10-cis-heptadecenoyl-CoA degradation (yeast) YPA_3437 PWY-7338 10-trans-heptadecenoyl-CoA degradation (reductase-dependent, yeast) YPA_3437 PWY-7339 10-trans-heptadecenoyl-CoA degradation (MFE-dependent, yeast) YPA_3437 PWY-7340 9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast) YPA_3437 PWY-735 jasmonic acid biosynthesis YPA_3441 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) YPA_3441 PWY-5189 tetrapyrrole biosynthesis II (from glycine) YPA_3451 PWY-4261 glycerol degradation I YPA_3452 PWY-5484 glycolysis II (from fructose 6-phosphate) YPA_3456 PWY-1042 glycolysis IV (plant cytosol) YPA_3456 PWY-5484 glycolysis II (from fructose 6-phosphate) YPA_3456 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) YPA_3456 PWY-7003 glycerol degradation to butanol YPA_3463 PWY-1042 glycolysis IV (plant cytosol) YPA_3463 PWY-1861 formaldehyde assimilation II (RuMP Cycle) YPA_3463 PWY-5484 glycolysis II (from fructose 6-phosphate) YPA_3463 PWY-7385 1,3-propanediol biosynthesis (engineered) YPA_3473 PWY-6936 seleno-amino acid biosynthesis YPA_3473 PWY-7274 D-cycloserine biosynthesis YPA_3474 PWY-5667 CDP-diacylglycerol biosynthesis I YPA_3474 PWY-5981 CDP-diacylglycerol biosynthesis III YPA_3478 PWY-1042 glycolysis IV (plant cytosol) YPA_3478 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) YPA_3478 PWY-5484 glycolysis II (from fructose 6-phosphate) YPA_3478 PWY-5723 Rubisco shunt YPA_3478 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) YPA_3478 PWY-6886 1-butanol autotrophic biosynthesis YPA_3478 PWY-6901 superpathway of glucose and xylose degradation YPA_3478 PWY-7003 glycerol degradation to butanol YPA_3478 PWY-7124 ethylene biosynthesis V (engineered) YPA_3478 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) YPA_3482 PWY-7378 aminopropanol phosphate biosynthesis II YPA_3495 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III YPA_3495 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I YPA_3495 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II YPA_3495 PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation YPA_3497 PWY-5686 UMP biosynthesis YPA_3502 PWY-7221 guanosine ribonucleotides de novo biosynthesis YPA_3517 PWY-381 nitrate reduction II (assimilatory) YPA_3517 PWY-5675 nitrate reduction V (assimilatory) YPA_3517 PWY-6549 L-glutamine biosynthesis III YPA_3517 PWY-6963 ammonia assimilation cycle I YPA_3517 PWY-6964 ammonia assimilation cycle II YPA_3529 PWY-5964 guanylyl molybdenum cofactor biosynthesis YPA_3536 PWY-6502 oxidized GTP and dGTP detoxification YPA_3544 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) YPA_3544 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) YPA_3545 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) YPA_3545 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) YPA_3546 PWY-5265 peptidoglycan biosynthesis II (staphylococci) YPA_3546 PWY-6385 peptidoglycan biosynthesis III (mycobacteria) YPA_3546 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) YPA_3546 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) YPA_3548 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) YPA_3548 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) YPA_3549 PWY-5265 peptidoglycan biosynthesis II (staphylococci) YPA_3549 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) YPA_3549 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) YPA_3550 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) YPA_3550 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) YPA_3559 PWY-5101 L-isoleucine biosynthesis II YPA_3559 PWY-5103 L-isoleucine biosynthesis III YPA_3559 PWY-5104 L-isoleucine biosynthesis IV YPA_3559 PWY-5938 (R)-acetoin biosynthesis I YPA_3559 PWY-5939 (R)-acetoin biosynthesis II YPA_3559 PWY-6389 (S)-acetoin biosynthesis YPA_3559 PWY-7111 pyruvate fermentation to isobutanol (engineered) YPA_3560 PWY-5101 L-isoleucine biosynthesis II YPA_3560 PWY-5103 L-isoleucine biosynthesis III YPA_3560 PWY-5104 L-isoleucine biosynthesis IV YPA_3560 PWY-5938 (R)-acetoin biosynthesis I YPA_3560 PWY-5939 (R)-acetoin biosynthesis II YPA_3560 PWY-6389 (S)-acetoin biosynthesis YPA_3560 PWY-7111 pyruvate fermentation to isobutanol (engineered) YPA_3564 PWY-6871 3-methylbutanol biosynthesis YPA_3565 PWY-7396 butanol and isobutanol biosynthesis (engineered) YPA_3601 PWY-6123 inosine-5'-phosphate biosynthesis I YPA_3601 PWY-6124 inosine-5'-phosphate biosynthesis II YPA_3601 PWY-7234 inosine-5'-phosphate biosynthesis III YPA_3602 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I YPA_3602 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II YPA_3602 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis YPA_3607 PWY-5531 chlorophyllide a biosynthesis II (anaerobic) YPA_3607 PWY-7159 chlorophyllide a biosynthesis III (aerobic, light independent) YPA_3609 PWY-5381 pyridine nucleotide cycling (plants) YPA_3611 PWY-6890 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis YPA_3612 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) YPA_3612 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) YPA_3612 PWY-6897 thiamin salvage II YPA_3612 PWY-6907 thiamin diphosphate biosynthesis III (Staphylococcus) YPA_3612 PWY-6908 thiamin diphosphate biosynthesis IV (eukaryotes) YPA_3612 PWY-7353 4-methyl-5(β-hydroxyethyl)thiazole salvage (yeast) YPA_3612 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) YPA_3615 PWY-6891 thiazole biosynthesis II (Bacillus) YPA_3615 PWY-6892 thiazole biosynthesis I (E. coli) YPA_3616 PWY-6892 thiazole biosynthesis I (E. coli) YPA_3616 PWY-7380 biotin biosynthesis from 8-amino-7-oxononanoate II YPA_3635 PWY-7180 2'-deoxy-α-D-ribose 1-phosphate degradation YPA_3650 PWY-4261 glycerol degradation I YPA_3673 PWY-6163 chorismate biosynthesis from 3-dehydroquinate YPA_3673 PWY-6416 quinate degradation II YPA_3673 PWY-6707 gallate biosynthesis YPA_3710 PWY-7310 D-glucosaminate degradation YPA_3715 PWY-5686 UMP biosynthesis YPA_3725 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I YPA_3725 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) YPA_3734 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) YPA_3734 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) YPA_3758 PWY-4061 glutathione-mediated detoxification I YPA_3758 PWY-6842 glutathione-mediated detoxification II YPA_3758 PWY-7112 4-hydroxy-2-nonenal detoxification YPA_3758 PWY-7533 gliotoxin biosynthesis YPA_3766 PWY-4261 glycerol degradation I YPA_3766 PWY-6118 glycerol-3-phosphate shuttle YPA_3766 PWY-6952 glycerophosphodiester degradation YPA_3767 PWY-5941 glycogen degradation II (eukaryotic) YPA_3767 PWY-622 starch biosynthesis YPA_3767 PWY-6731 starch degradation III YPA_3767 PWY-6737 starch degradation V YPA_3767 PWY-7238 sucrose biosynthesis II YPA_3768 PWY-622 starch biosynthesis YPA_3769 PWY-622 starch biosynthesis YPA_3771 PWY-5067 glycogen biosynthesis II (from UDP-D-Glucose) YPA_3771 PWY-622 starch biosynthesis YPA_3777 PWY-2941 L-lysine biosynthesis II YPA_3777 PWY-2942 L-lysine biosynthesis III YPA_3777 PWY-5097 L-lysine biosynthesis VI YPA_3777 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) YPA_3777 PWY-6559 spermidine biosynthesis II YPA_3777 PWY-6562 norspermidine biosynthesis YPA_3777 PWY-7153 grixazone biosynthesis YPA_3777 PWY-7400 L-arginine biosynthesis IV (archaebacteria) YPA_3782 PWY-5530 sorbitol biosynthesis II YPA_3782 PWY-6163 chorismate biosynthesis from 3-dehydroquinate YPA_3805 PWY-4081 glutathione redox reactions I YPA_3825 PWY-6788 cellulose degradation II (fungi) YPA_3844 PWY-4202 arsenate detoxification I (glutaredoxin) YPA_3844 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation YPA_3844 PWY-6608 guanosine nucleotides degradation III YPA_3844 PWY-6609 adenine and adenosine salvage III YPA_3844 PWY-6611 adenine and adenosine salvage V YPA_3844 PWY-6620 guanine and guanosine salvage YPA_3844 PWY-6627 salinosporamide A biosynthesis YPA_3844 PWY-6644 fluoroacetate and fluorothreonine biosynthesis YPA_3844 PWY-7179 purine deoxyribonucleosides degradation I YPA_3844 PWY-7179-1 purine deoxyribonucleosides degradation YPA_3845 PWY-7180 2'-deoxy-α-D-ribose 1-phosphate degradation YPA_3848 PWY-7180 2'-deoxy-α-D-ribose 1-phosphate degradation YPA_3861 PWY-1081 homogalacturonan degradation YPA_3861 PWY-7246 pectin degradation II YPA_3861 PWY-7248 pectin degradation III YPA_3869 PWY-4261 glycerol degradation I YPA_3881 PWY-7310 D-glucosaminate degradation YPA_3882 PWY-7310 D-glucosaminate degradation YPA_3883 PWY-7310 D-glucosaminate degradation YPA_3906 PWY-7219 adenosine ribonucleotides de novo biosynthesis YPA_3912 PWY-2781 cis-zeatin biosynthesis YPA_3916 PWY-6938 NADH repair YPA_3920 PWY-5669 phosphatidylethanolamine biosynthesis I YPA_3923 PWY-3781 aerobic respiration I (cytochrome c) YPA_3923 PWY-4302 aerobic respiration III (alternative oxidase pathway) YPA_3923 PWY-5392 reductive TCA cycle II YPA_3923 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation YPA_3923 PWY-5690 TCA cycle II (plants and fungi) YPA_3923 PWY-5913 TCA cycle VI (obligate autotrophs) YPA_3923 PWY-6728 methylaspartate cycle YPA_3923 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) YPA_3923 PWY-7254 TCA cycle VII (acetate-producers) YPA_3923 PWY-7279 aerobic respiration II (cytochrome c) (yeast) YPA_3923 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) YPA_3924 PWY-3781 aerobic respiration I (cytochrome c) YPA_3924 PWY-4302 aerobic respiration III (alternative oxidase pathway) YPA_3924 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation YPA_3924 PWY-5690 TCA cycle II (plants and fungi) YPA_3924 PWY-6728 methylaspartate cycle YPA_3924 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) YPA_3924 PWY-7254 TCA cycle VII (acetate-producers) YPA_3924 PWY-7279 aerobic respiration II (cytochrome c) (yeast) YPA_3934 PWY-5392 reductive TCA cycle II YPA_3934 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation YPA_3934 PWY-5690 TCA cycle II (plants and fungi) YPA_3934 PWY-5913 TCA cycle VI (obligate autotrophs) YPA_3934 PWY-6728 methylaspartate cycle YPA_3934 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) YPA_3934 PWY-7254 TCA cycle VII (acetate-producers) YPA_3934 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) YPA_3938 PWY-1881 formate oxidation to CO2 YPA_3938 PWY-5497 purine nucleobases degradation II (anaerobic) YPA_3938 PWY-6696 oxalate degradation III YPA_3952 PWY-4261 glycerol degradation I YPA_3963 PWY-5913 TCA cycle VI (obligate autotrophs) YPA_3963 PWY-6318 L-phenylalanine degradation IV (mammalian, via side chain) YPA_3963 PWY-6638 sulfolactate degradation III YPA_3963 PWY-6642 (R)-cysteate degradation YPA_3963 PWY-6643 coenzyme M biosynthesis II YPA_3963 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type YPA_3963 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type YPA_3963 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) YPA_3964 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) YPA_3971 PWY-7039 phosphatidate metabolism, as a signaling molecule YPA_3972 PWY-5667 CDP-diacylglycerol biosynthesis I YPA_3972 PWY-7411 superpathway of phosphatidate biosynthesis (yeast) YPA_3974 PWY-5755 4-hydroxybenzoate biosynthesis II (microbes) YPA_3974 PWY-5870 ubiquinol-8 biosynthesis (eukaryotic) YPA_3974 PWY-6148 tetrahydromethanopterin biosynthesis YPA_3976 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) YPA_3976 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) YPA_3994 PWY-2201 folate transformations I YPA_3994 PWY-3841 folate transformations II YPA_4004 PWY-6936 seleno-amino acid biosynthesis YPA_4016 PWY-7219 adenosine ribonucleotides de novo biosynthesis YPA_4031 PWY-6672 cis-genanyl-CoA degradation YPA_4031 PWY-7118 chitin degradation to ethanol YPA_4051 PWY-2941 L-lysine biosynthesis II YPA_4051 PWY-2942 L-lysine biosynthesis III YPA_4051 PWY-5097 L-lysine biosynthesis VI YPA_4051 PWY-6559 spermidine biosynthesis II YPA_4051 PWY-6562 norspermidine biosynthesis YPA_4051 PWY-7153 grixazone biosynthesis YPA_4052 PWY-702 L-methionine biosynthesis II YPA_4056 PWY-1861 formaldehyde assimilation II (RuMP Cycle) YPA_4056 PWY-5723 Rubisco shunt YPA_4067 PWY-5523 5,6-dimethylbenzimidazole biosynthesis YPA_4067 PWY-6167 flavin biosynthesis II (archaea) YPA_4067 PWY-6168 flavin biosynthesis III (fungi) YPA_4071 PWY-7560 methylerythritol phosphate pathway II YPA_4073 PWY-2941 L-lysine biosynthesis II YPA_4073 PWY-2942 L-lysine biosynthesis III YPA_4073 PWY-5097 L-lysine biosynthesis VI YPA_4074 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) YPA_4074 PWY-5686 UMP biosynthesis YPA_4074 PWY-7400 L-arginine biosynthesis IV (archaebacteria) YPA_4075 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) YPA_4075 PWY-5686 UMP biosynthesis YPA_4075 PWY-7400 L-arginine biosynthesis IV (archaebacteria) YPA_4079 PWY-3841 folate transformations II YPA_4079 PWY-6614 tetrahydrofolate biosynthesis YPA_4104 PWY-5028 L-histidine degradation II YPA_4104 PWY-5030 L-histidine degradation III YPA_4105 PWY-5028 L-histidine degradation II YPA_4105 PWY-5030 L-histidine degradation III YPA_4129 PWY-4261 glycerol degradation I YPA_4163 PWY-6749 CMP-legionaminate biosynthesis I YPA_4164 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II YPA_4166 PWY-7219 adenosine ribonucleotides de novo biosynthesis YPA_4168 PWY-7219 adenosine ribonucleotides de novo biosynthesis