YPD4_0013	PWY-5964	guanylyl molybdenum cofactor biosynthesis
YPD4_0023	PWY-381	nitrate reduction II (assimilatory)
YPD4_0023	PWY-5675	nitrate reduction V (assimilatory)
YPD4_0023	PWY-6549	L-glutamine biosynthesis III
YPD4_0023	PWY-6963	ammonia assimilation cycle I
YPD4_0023	PWY-6964	ammonia assimilation cycle II
YPD4_0038	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
YPD4_0043	PWY-5686	UMP biosynthesis
YPD4_0045	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
YPD4_0045	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
YPD4_0045	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
YPD4_0045	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
YPD4_0056	PWY-7378	aminopropanol phosphate biosynthesis II
YPD4_0060	PWY-1042	glycolysis IV (plant cytosol)
YPD4_0060	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
YPD4_0060	PWY-5484	glycolysis II (from fructose 6-phosphate)
YPD4_0060	PWY-5723	Rubisco shunt
YPD4_0060	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
YPD4_0060	PWY-6886	1-butanol autotrophic biosynthesis
YPD4_0060	PWY-6901	superpathway of glucose and xylose degradation
YPD4_0060	PWY-7003	glycerol degradation to butanol
YPD4_0060	PWY-7124	ethylene biosynthesis V (engineered)
YPD4_0060	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
YPD4_0063	PWY-5667	CDP-diacylglycerol biosynthesis I
YPD4_0063	PWY-5981	CDP-diacylglycerol biosynthesis III
YPD4_0064	PWY-6936	seleno-amino acid biosynthesis
YPD4_0064	PWY-7274	D-cycloserine biosynthesis
YPD4_0072	PWY-1042	glycolysis IV (plant cytosol)
YPD4_0072	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
YPD4_0072	PWY-5484	glycolysis II (from fructose 6-phosphate)
YPD4_0072	PWY-7385	1,3-propanediol biosynthesis (engineered)
YPD4_0079	PWY-1042	glycolysis IV (plant cytosol)
YPD4_0079	PWY-5484	glycolysis II (from fructose 6-phosphate)
YPD4_0079	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
YPD4_0079	PWY-7003	glycerol degradation to butanol
YPD4_0083	PWY-5484	glycolysis II (from fructose 6-phosphate)
YPD4_0084	PWY-4261	glycerol degradation I
YPD4_0091	PWY-5839	menaquinol-7 biosynthesis
YPD4_0091	PWY-5851	demethylmenaquinol-9 biosynthesis
YPD4_0091	PWY-5852	demethylmenaquinol-8 biosynthesis I
YPD4_0091	PWY-5853	demethylmenaquinol-6 biosynthesis I
YPD4_0091	PWY-5890	menaquinol-10 biosynthesis
YPD4_0091	PWY-5891	menaquinol-11 biosynthesis
YPD4_0091	PWY-5892	menaquinol-12 biosynthesis
YPD4_0091	PWY-5895	menaquinol-13 biosynthesis
YPD4_0100	PWY-2941	L-lysine biosynthesis II
YPD4_0100	PWY-2942	L-lysine biosynthesis III
YPD4_0100	PWY-5097	L-lysine biosynthesis VI
YPD4_0100	PWY-6559	spermidine biosynthesis II
YPD4_0100	PWY-6562	norspermidine biosynthesis
YPD4_0100	PWY-7153	grixazone biosynthesis
YPD4_0101	PWY-2201	folate transformations I
YPD4_0101	PWY-3841	folate transformations II
YPD4_0106	PWY-5350	thiosulfate disproportionation III (rhodanese)
YPD4_0108	PWY-5941	glycogen degradation II (eukaryotic)
YPD4_0108	PWY-622	starch biosynthesis
YPD4_0108	PWY-6731	starch degradation III
YPD4_0108	PWY-6737	starch degradation V
YPD4_0108	PWY-7238	sucrose biosynthesis II
YPD4_0109	PWY-5941	glycogen degradation II (eukaryotic)
YPD4_0109	PWY-622	starch biosynthesis
YPD4_0109	PWY-6731	starch degradation III
YPD4_0109	PWY-6737	starch degradation V
YPD4_0109	PWY-7238	sucrose biosynthesis II
YPD4_0110	PWY-5941	glycogen degradation II (eukaryotic)
YPD4_0110	PWY-6724	starch degradation II
YPD4_0110	PWY-6737	starch degradation V
YPD4_0110	PWY-7238	sucrose biosynthesis II
YPD4_0113	PWY-6519	8-amino-7-oxononanoate biosynthesis I
YPD4_0119	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
YPD4_0119	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
YPD4_0132	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
YPD4_0133	PWY-6164	3-dehydroquinate biosynthesis I
YPD4_0136	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
YPD4_0136	PWY-5723	Rubisco shunt
YPD4_0137	PWY-181	photorespiration
YPD4_0139	PWY-5194	siroheme biosynthesis
YPD4_0139	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
YPD4_0142	PWY-6683	sulfate reduction III (assimilatory)
YPD4_0150	PWY-5958	acridone alkaloid biosynthesis
YPD4_0150	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
YPD4_0150	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
YPD4_0156	PWY-5723	Rubisco shunt
YPD4_0167	PWY-6785	hydrogen production VIII
YPD4_0213	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
YPD4_0220	PWY-6672	<i>cis</i>-genanyl-CoA degradation
YPD4_0220	PWY-7118	chitin degradation to ethanol
YPD4_0231	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
YPD4_0242	PWY-6936	seleno-amino acid biosynthesis
YPD4_0252	PWY-2201	folate transformations I
YPD4_0252	PWY-3841	folate transformations II
YPD4_0270	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
YPD4_0270	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
YPD4_0272	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
YPD4_0272	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
YPD4_0272	PWY-6148	tetrahydromethanopterin biosynthesis
YPD4_0274	PWY-5667	CDP-diacylglycerol biosynthesis I
YPD4_0274	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
YPD4_0275	PWY-7039	phosphatidate metabolism, as a signaling molecule
YPD4_0281	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
YPD4_0282	PWY-5913	TCA cycle VI (obligate autotrophs)
YPD4_0282	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
YPD4_0282	PWY-6638	sulfolactate degradation III
YPD4_0282	PWY-6642	(<i>R</i>)-cysteate degradation
YPD4_0282	PWY-6643	coenzyme M biosynthesis II
YPD4_0282	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
YPD4_0282	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
YPD4_0282	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
YPD4_0290	PWY-4261	glycerol degradation I
YPD4_0299	PWY-1881	formate oxidation to CO<sub>2</sub>
YPD4_0299	PWY-5497	purine nucleobases degradation II (anaerobic)
YPD4_0299	PWY-6696	oxalate degradation III
YPD4_0302	PWY-5392	reductive TCA cycle II
YPD4_0302	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
YPD4_0302	PWY-5690	TCA cycle II (plants and fungi)
YPD4_0302	PWY-5913	TCA cycle VI (obligate autotrophs)
YPD4_0302	PWY-6728	methylaspartate cycle
YPD4_0302	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
YPD4_0302	PWY-7254	TCA cycle VII (acetate-producers)
YPD4_0302	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
YPD4_0311	PWY-3781	aerobic respiration I (cytochrome c)
YPD4_0311	PWY-4302	aerobic respiration III (alternative oxidase pathway)
YPD4_0311	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
YPD4_0311	PWY-5690	TCA cycle II (plants and fungi)
YPD4_0311	PWY-6728	methylaspartate cycle
YPD4_0311	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
YPD4_0311	PWY-7254	TCA cycle VII (acetate-producers)
YPD4_0311	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
YPD4_0312	PWY-3781	aerobic respiration I (cytochrome c)
YPD4_0312	PWY-4302	aerobic respiration III (alternative oxidase pathway)
YPD4_0312	PWY-5392	reductive TCA cycle II
YPD4_0312	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
YPD4_0312	PWY-5690	TCA cycle II (plants and fungi)
YPD4_0312	PWY-5913	TCA cycle VI (obligate autotrophs)
YPD4_0312	PWY-6728	methylaspartate cycle
YPD4_0312	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
YPD4_0312	PWY-7254	TCA cycle VII (acetate-producers)
YPD4_0312	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
YPD4_0312	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
YPD4_0315	PWY-5669	phosphatidylethanolamine biosynthesis I
YPD4_0319	PWY-6938	NADH repair
YPD4_0323	PWY-2781	<i>cis</i>-zeatin biosynthesis
YPD4_0328	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
YPD4_0348	PWY-7310	D-glucosaminate degradation
YPD4_0349	PWY-7310	D-glucosaminate degradation
YPD4_0350	PWY-7310	D-glucosaminate degradation
YPD4_0359	PWY-4261	glycerol degradation I
YPD4_0364	PWY-1081	homogalacturonan degradation
YPD4_0364	PWY-7246	pectin degradation II
YPD4_0364	PWY-7248	pectin degradation III
YPD4_0375	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
YPD4_0378	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
YPD4_0379	PWY-4202	arsenate detoxification I (glutaredoxin)
YPD4_0379	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
YPD4_0379	PWY-6608	guanosine nucleotides degradation III
YPD4_0379	PWY-6609	adenine and adenosine salvage III
YPD4_0379	PWY-6611	adenine and adenosine salvage V
YPD4_0379	PWY-6620	guanine and guanosine salvage
YPD4_0379	PWY-6627	salinosporamide A biosynthesis
YPD4_0379	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
YPD4_0379	PWY-7179	purine deoxyribonucleosides degradation I
YPD4_0379	PWY-7179-1	purine deoxyribonucleosides degradation
YPD4_0398	PWY-2941	L-lysine biosynthesis II
YPD4_0398	PWY-2942	L-lysine biosynthesis III
YPD4_0398	PWY-5097	L-lysine biosynthesis VI
YPD4_0398	PWY-6559	spermidine biosynthesis II
YPD4_0398	PWY-6562	norspermidine biosynthesis
YPD4_0398	PWY-7153	grixazone biosynthesis
YPD4_0400	PWY-702	L-methionine biosynthesis II
YPD4_0403	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
YPD4_0403	PWY-5723	Rubisco shunt
YPD4_0412	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
YPD4_0412	PWY-6167	flavin biosynthesis II (archaea)
YPD4_0412	PWY-6168	flavin biosynthesis III (fungi)
YPD4_0416	PWY-7560	methylerythritol phosphate pathway II
YPD4_0418	PWY-2941	L-lysine biosynthesis II
YPD4_0418	PWY-2942	L-lysine biosynthesis III
YPD4_0418	PWY-5097	L-lysine biosynthesis VI
YPD4_0419	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
YPD4_0419	PWY-5686	UMP biosynthesis
YPD4_0419	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
YPD4_0420	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
YPD4_0420	PWY-5686	UMP biosynthesis
YPD4_0420	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
YPD4_0424	PWY-3841	folate transformations II
YPD4_0424	PWY-6614	tetrahydrofolate biosynthesis
YPD4_0467	PWY-7396	butanol and isobutanol biosynthesis (engineered)
YPD4_0468	PWY-6871	3-methylbutanol biosynthesis
YPD4_0471	PWY-5101	L-isoleucine biosynthesis II
YPD4_0471	PWY-5103	L-isoleucine biosynthesis III
YPD4_0471	PWY-5104	L-isoleucine biosynthesis IV
YPD4_0471	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
YPD4_0471	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
YPD4_0471	PWY-6389	(<i>S</i>)-acetoin biosynthesis
YPD4_0471	PWY-7111	pyruvate fermentation to isobutanol (engineered)
YPD4_0472	PWY-5101	L-isoleucine biosynthesis II
YPD4_0472	PWY-5103	L-isoleucine biosynthesis III
YPD4_0472	PWY-5104	L-isoleucine biosynthesis IV
YPD4_0472	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
YPD4_0472	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
YPD4_0472	PWY-6389	(<i>S</i>)-acetoin biosynthesis
YPD4_0472	PWY-7111	pyruvate fermentation to isobutanol (engineered)
YPD4_0481	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
YPD4_0481	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
YPD4_0482	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
YPD4_0482	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
YPD4_0482	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
YPD4_0483	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
YPD4_0483	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
YPD4_0485	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
YPD4_0485	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
YPD4_0485	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
YPD4_0485	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
YPD4_0486	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
YPD4_0486	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
YPD4_0487	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
YPD4_0487	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
YPD4_0495	PWY-6502	oxidized GTP and dGTP detoxification
YPD4_0507	PWY-7247	&beta;-D-glucuronide and D-glucuronate degradation
YPD4_0507	PWY-7248	pectin degradation III
YPD4_0560	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
YPD4_0560	PWY-6148	tetrahydromethanopterin biosynthesis
YPD4_0560	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
YPD4_0560	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
YPD4_0569	PWY-6167	flavin biosynthesis II (archaea)
YPD4_0569	PWY-6168	flavin biosynthesis III (fungi)
YPD4_0583	PWY-5667	CDP-diacylglycerol biosynthesis I
YPD4_0583	PWY-5981	CDP-diacylglycerol biosynthesis III
YPD4_0583	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
YPD4_0583	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
YPD4_0591	PWY-6936	seleno-amino acid biosynthesis
YPD4_0625	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
YPD4_0709	PWY-6157	autoinducer AI-1 biosynthesis
YPD4_0725	PWY-46	putrescine biosynthesis III
YPD4_0725	PWY-6305	putrescine biosynthesis IV
YPD4_0739	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
YPD4_0742	PWY-3341	L-proline biosynthesis III
YPD4_0742	PWY-4981	L-proline biosynthesis II (from arginine)
YPD4_0742	PWY-6344	L-ornithine degradation II (Stickland reaction)
YPD4_0743	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
YPD4_0745	PWY-43	putrescine biosynthesis II
YPD4_0746	PWY-43	putrescine biosynthesis II
YPD4_0753	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
YPD4_0753	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
YPD4_0754	PWY-40	putrescine biosynthesis I
YPD4_0754	PWY-43	putrescine biosynthesis II
YPD4_0754	PWY-6305	putrescine biosynthesis IV
YPD4_0754	PWY-6834	spermidine biosynthesis III
YPD4_0757	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
YPD4_0757	PWY-5723	Rubisco shunt
YPD4_0757	PWY-6891	thiazole biosynthesis II (Bacillus)
YPD4_0757	PWY-6892	thiazole biosynthesis I (E. coli)
YPD4_0757	PWY-6901	superpathway of glucose and xylose degradation
YPD4_0757	PWY-7560	methylerythritol phosphate pathway II
YPD4_0760	PWY-1042	glycolysis IV (plant cytosol)
YPD4_0760	PWY-5484	glycolysis II (from fructose 6-phosphate)
YPD4_0760	PWY-6886	1-butanol autotrophic biosynthesis
YPD4_0760	PWY-6901	superpathway of glucose and xylose degradation
YPD4_0760	PWY-7003	glycerol degradation to butanol
YPD4_0761	PWY-1042	glycolysis IV (plant cytosol)
YPD4_0761	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
YPD4_0761	PWY-5484	glycolysis II (from fructose 6-phosphate)
YPD4_0761	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
YPD4_0761	PWY-7385	1,3-propanediol biosynthesis (engineered)
YPD4_0766	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
YPD4_0766	PWY-5723	Rubisco shunt
YPD4_0818	PWY-6807	xyloglucan degradation II (exoglucanase)
YPD4_0819	PWY-7310	D-glucosaminate degradation
YPD4_0826	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
YPD4_0826	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
YPD4_0831	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
YPD4_0832	PWY-6906	chitin derivatives degradation
YPD4_0832	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
YPD4_0832	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
YPD4_0836	PWY-7310	D-glucosaminate degradation
YPD4_0847	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
YPD4_0847	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
YPD4_0847	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
YPD4_0847	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
YPD4_0867	PWY-2941	L-lysine biosynthesis II
YPD4_0867	PWY-2942	L-lysine biosynthesis III
YPD4_0867	PWY-5097	L-lysine biosynthesis VI
YPD4_0870	PWY-6622	heptadecane biosynthesis
YPD4_0870	PWY-7032	alkane biosynthesis I
YPD4_0877	PWY-3841	folate transformations II
YPD4_0877	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
YPD4_0877	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
YPD4_0877	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
YPD4_0877	PWY-7199	pyrimidine deoxyribonucleosides salvage
YPD4_0877	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
YPD4_0888	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
YPD4_0893	PWY-6823	molybdenum cofactor biosynthesis
YPD4_0893	PWY-6891	thiazole biosynthesis II (Bacillus)
YPD4_0893	PWY-6892	thiazole biosynthesis I (E. coli)
YPD4_0893	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
YPD4_0899	PWY-6700	queuosine biosynthesis
YPD4_0914	PWY-7560	methylerythritol phosphate pathway II
YPD4_0922	PWY-5971	palmitate biosynthesis II (bacteria and plants)
YPD4_0922	PWY-5973	<i>cis</i>-vaccenate biosynthesis
YPD4_0922	PWY-5989	stearate biosynthesis II (bacteria and plants)
YPD4_0922	PWY-5994	palmitate biosynthesis I (animals and fungi)
YPD4_0922	PWY-6113	superpathway of mycolate biosynthesis
YPD4_0922	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
YPD4_0922	PWY-6519	8-amino-7-oxononanoate biosynthesis I
YPD4_0922	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
YPD4_0922	PWYG-321	mycolate biosynthesis
YPD4_0927	PWY-4381	fatty acid biosynthesis initiation I
YPD4_0927	PWY-5743	3-hydroxypropanoate cycle
YPD4_0927	PWY-5744	glyoxylate assimilation
YPD4_0927	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
YPD4_0927	PWY-6679	jadomycin biosynthesis
YPD4_0927	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
YPD4_0944	PWY-5386	methylglyoxal degradation I
YPD4_0962	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
YPD4_0962	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
YPD4_0962	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
YPD4_0966	PWY-3781	aerobic respiration I (cytochrome c)
YPD4_0966	PWY-4302	aerobic respiration III (alternative oxidase pathway)
YPD4_0966	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
YPD4_0966	PWY-5690	TCA cycle II (plants and fungi)
YPD4_0966	PWY-6728	methylaspartate cycle
YPD4_0966	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
YPD4_0966	PWY-7254	TCA cycle VII (acetate-producers)
YPD4_0966	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
YPD4_0967	PWY-3781	aerobic respiration I (cytochrome c)
YPD4_0967	PWY-4302	aerobic respiration III (alternative oxidase pathway)
YPD4_0967	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
YPD4_0967	PWY-5690	TCA cycle II (plants and fungi)
YPD4_0967	PWY-6728	methylaspartate cycle
YPD4_0967	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
YPD4_0967	PWY-7254	TCA cycle VII (acetate-producers)
YPD4_0967	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
YPD4_0968	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
YPD4_0969	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
YPD4_0970	PWY-5392	reductive TCA cycle II
YPD4_0970	PWY-5537	pyruvate fermentation to acetate V
YPD4_0970	PWY-5538	pyruvate fermentation to acetate VI
YPD4_0970	PWY-5690	TCA cycle II (plants and fungi)
YPD4_0970	PWY-5913	TCA cycle VI (obligate autotrophs)
YPD4_0970	PWY-6728	methylaspartate cycle
YPD4_0970	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
YPD4_0970	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
YPD4_0971	PWY-5392	reductive TCA cycle II
YPD4_0971	PWY-5537	pyruvate fermentation to acetate V
YPD4_0971	PWY-5538	pyruvate fermentation to acetate VI
YPD4_0971	PWY-5690	TCA cycle II (plants and fungi)
YPD4_0971	PWY-5913	TCA cycle VI (obligate autotrophs)
YPD4_0971	PWY-6728	methylaspartate cycle
YPD4_0971	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
YPD4_0971	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
YPD4_0980	PWY-5316	nicotine biosynthesis
YPD4_0980	PWY-7342	superpathway of nicotine biosynthesis
YPD4_0983	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
YPD4_0983	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
YPD4_0983	PWY-6164	3-dehydroquinate biosynthesis I
YPD4_0986	PWY-1622	formaldehyde assimilation I (serine pathway)
YPD4_0986	PWY-5484	glycolysis II (from fructose 6-phosphate)
YPD4_0988	PWY-2723	trehalose degradation V
YPD4_0988	PWY-6317	galactose degradation I (Leloir pathway)
YPD4_0988	PWY-6737	starch degradation V
YPD4_0989	PWY-3821	galactose degradation III
YPD4_0989	PWY-6317	galactose degradation I (Leloir pathway)
YPD4_0989	PWY-6527	stachyose degradation
YPD4_0990	PWY-6317	galactose degradation I (Leloir pathway)
YPD4_0990	PWY-6527	stachyose degradation
YPD4_0991	PWY-3821	galactose degradation III
YPD4_0991	PWY-6317	galactose degradation I (Leloir pathway)
YPD4_0991	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
YPD4_0991	PWY-6527	stachyose degradation
YPD4_0991	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
YPD4_0991	PWY-7344	UDP-D-galactose biosynthesis
YPD4_1002	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
YPD4_1003	PWY-6519	8-amino-7-oxononanoate biosynthesis I
YPD4_1003	PWY-6578	8-amino-7-oxononanoate biosynthesis III
YPD4_1003	PWY-7147	8-amino-7-oxononanoate biosynthesis II
YPD4_1004	PWY-6519	8-amino-7-oxononanoate biosynthesis I
YPD4_1005	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
YPD4_1009	PWY-6823	molybdenum cofactor biosynthesis
YPD4_1011	PWY-6823	molybdenum cofactor biosynthesis
YPD4_1014	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
YPD4_1014	PWY-7494	choline degradation IV
YPD4_1015	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
YPD4_1015	PWY-7494	choline degradation IV
YPD4_1020	PWY-4202	arsenate detoxification I (glutaredoxin)
YPD4_1020	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
YPD4_1020	PWY-6608	guanosine nucleotides degradation III
YPD4_1020	PWY-6609	adenine and adenosine salvage III
YPD4_1020	PWY-6611	adenine and adenosine salvage V
YPD4_1020	PWY-6620	guanine and guanosine salvage
YPD4_1020	PWY-6627	salinosporamide A biosynthesis
YPD4_1020	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
YPD4_1020	PWY-7179	purine deoxyribonucleosides degradation I
YPD4_1020	PWY-7179-1	purine deoxyribonucleosides degradation
YPD4_1046	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
YPD4_1046	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
YPD4_1046	PWY-6454	vancomycin resistance I
YPD4_1046	PWY-6901	superpathway of glucose and xylose degradation
YPD4_1062	PWY-5350	thiosulfate disproportionation III (rhodanese)
YPD4_1073	PWY-5506	methanol oxidation to formaldehyde IV
YPD4_1078	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
YPD4_1078	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
YPD4_1078	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
YPD4_1078	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
YPD4_1078	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
YPD4_1078	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
YPD4_1078	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
YPD4_1078	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
YPD4_1079	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
YPD4_1079	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
YPD4_1079	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
YPD4_1079	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
YPD4_1079	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
YPD4_1079	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
YPD4_1079	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
YPD4_1079	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
YPD4_1080	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
YPD4_1080	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
YPD4_1080	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
YPD4_1080	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
YPD4_1080	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
YPD4_1080	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
YPD4_1080	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
YPD4_1080	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
YPD4_1080	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
YPD4_1080	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
YPD4_1134	PWY-7242	D-fructuronate degradation
YPD4_1141	PWY-4261	glycerol degradation I
YPD4_1142	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
YPD4_1142	PWY-5723	Rubisco shunt
YPD4_1149	PWY-7310	D-glucosaminate degradation
YPD4_1170	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
YPD4_1170	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
YPD4_1173	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
YPD4_1191	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
YPD4_1191	PWY-5957	L-nicotianamine biosynthesis
YPD4_1198	PWY-3461	L-tyrosine biosynthesis II
YPD4_1198	PWY-3462	L-phenylalanine biosynthesis II
YPD4_1198	PWY-6120	L-tyrosine biosynthesis III
YPD4_1198	PWY-6627	salinosporamide A biosynthesis
YPD4_1222	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
YPD4_1226	PWY-5480	pyruvate fermentation to ethanol I
YPD4_1226	PWY-5485	pyruvate fermentation to acetate IV
YPD4_1226	PWY-5493	reductive monocarboxylic acid cycle
YPD4_1234	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
YPD4_1235	PWY-7205	CMP phosphorylation
YPD4_1241	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
YPD4_1241	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
YPD4_1252	PWY-5913	TCA cycle VI (obligate autotrophs)
YPD4_1252	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
YPD4_1252	PWY-6638	sulfolactate degradation III
YPD4_1252	PWY-6642	(<i>R</i>)-cysteate degradation
YPD4_1252	PWY-6643	coenzyme M biosynthesis II
YPD4_1252	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
YPD4_1252	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
YPD4_1252	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
YPD4_1255	PWY-5381	pyridine nucleotide cycling (plants)
YPD4_1258	PWY-5686	UMP biosynthesis
YPD4_1271	PWY-5971	palmitate biosynthesis II (bacteria and plants)
YPD4_1271	PWY-5973	<i>cis</i>-vaccenate biosynthesis
YPD4_1271	PWY-5989	stearate biosynthesis II (bacteria and plants)
YPD4_1271	PWY-5994	palmitate biosynthesis I (animals and fungi)
YPD4_1271	PWY-6113	superpathway of mycolate biosynthesis
YPD4_1271	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
YPD4_1271	PWY-6519	8-amino-7-oxononanoate biosynthesis I
YPD4_1271	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
YPD4_1271	PWYG-321	mycolate biosynthesis
YPD4_1289	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
YPD4_1289	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
YPD4_1291	PWY-5971	palmitate biosynthesis II (bacteria and plants)
YPD4_1291	PWY-5973	<i>cis</i>-vaccenate biosynthesis
YPD4_1291	PWY-5989	stearate biosynthesis II (bacteria and plants)
YPD4_1291	PWY-5994	palmitate biosynthesis I (animals and fungi)
YPD4_1291	PWY-6113	superpathway of mycolate biosynthesis
YPD4_1291	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
YPD4_1291	PWY-6519	8-amino-7-oxononanoate biosynthesis I
YPD4_1291	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
YPD4_1291	PWYG-321	mycolate biosynthesis
YPD4_1294	PWY-6174	mevalonate pathway II (archaea)
YPD4_1294	PWY-7391	isoprene biosynthesis II (engineered)
YPD4_1294	PWY-7524	mevalonate pathway III (archaea)
YPD4_1294	PWY-922	mevalonate pathway I
YPD4_1299	PWY-4381	fatty acid biosynthesis initiation I
YPD4_1299	PWY-6799	fatty acid biosynthesis (plant mitochondria)
YPD4_1299	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
YPD4_1328	PWY-6823	molybdenum cofactor biosynthesis
YPD4_1329	PWY-6823	molybdenum cofactor biosynthesis
YPD4_1334	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
YPD4_1335	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
YPD4_1335	PWY-3162	L-tryptophan degradation V (side chain pathway)
YPD4_1335	PWY-5057	L-valine degradation II
YPD4_1335	PWY-5076	L-leucine degradation III
YPD4_1335	PWY-5078	L-isoleucine degradation II
YPD4_1335	PWY-5079	L-phenylalanine degradation III
YPD4_1335	PWY-5082	L-methionine degradation III
YPD4_1335	PWY-5480	pyruvate fermentation to ethanol I
YPD4_1335	PWY-5486	pyruvate fermentation to ethanol II
YPD4_1335	PWY-5751	phenylethanol biosynthesis
YPD4_1335	PWY-6028	acetoin degradation
YPD4_1335	PWY-6313	serotonin degradation
YPD4_1335	PWY-6333	acetaldehyde biosynthesis I
YPD4_1335	PWY-6342	noradrenaline and adrenaline degradation
YPD4_1335	PWY-6587	pyruvate fermentation to ethanol III
YPD4_1335	PWY-6802	salidroside biosynthesis
YPD4_1335	PWY-6871	3-methylbutanol biosynthesis
YPD4_1335	PWY-7013	L-1,2-propanediol degradation
YPD4_1335	PWY-7111	pyruvate fermentation to isobutanol (engineered)
YPD4_1335	PWY-7118	chitin degradation to ethanol
YPD4_1335	PWY-7396	butanol and isobutanol biosynthesis (engineered)
YPD4_1335	PWY-7557	dehydrodiconiferyl alcohol degradation
YPD4_1338	PWY-5663	tetrahydrobiopterin biosynthesis I
YPD4_1338	PWY-5664	tetrahydrobiopterin biosynthesis II
YPD4_1338	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
YPD4_1338	PWY-6703	preQ<sub>0</sub> biosynthesis
YPD4_1338	PWY-6983	tetrahydrobiopterin biosynthesis III
YPD4_1338	PWY-7442	drosopterin and aurodrosopterin biosynthesis
YPD4_1345	PWY-6556	pyrimidine ribonucleosides salvage II
YPD4_1345	PWY-7181	pyrimidine deoxyribonucleosides degradation
YPD4_1345	PWY-7193	pyrimidine ribonucleosides salvage I
YPD4_1345	PWY-7199	pyrimidine deoxyribonucleosides salvage
YPD4_1355	PWY-7193	pyrimidine ribonucleosides salvage I
YPD4_1356	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
YPD4_1370	PWY-3801	sucrose degradation II (sucrose synthase)
YPD4_1370	PWY-6527	stachyose degradation
YPD4_1370	PWY-6981	chitin biosynthesis
YPD4_1370	PWY-7238	sucrose biosynthesis II
YPD4_1370	PWY-7343	UDP-glucose biosynthesis
YPD4_1371	PWY-3801	sucrose degradation II (sucrose synthase)
YPD4_1371	PWY-6527	stachyose degradation
YPD4_1371	PWY-6981	chitin biosynthesis
YPD4_1371	PWY-7238	sucrose biosynthesis II
YPD4_1371	PWY-7343	UDP-glucose biosynthesis
YPD4_1386	PWY-6349	CDP-archaeol biosynthesis
YPD4_1398	PWY-4983	L-citrulline-nitric oxide cycle
YPD4_1398	PWY-4984	urea cycle
YPD4_1398	PWY-5	canavanine biosynthesis
YPD4_1398	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
YPD4_1398	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
YPD4_1408	PWY-6012	acyl carrier protein metabolism I
YPD4_1408	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
YPD4_1409	PWY-6527	stachyose degradation
YPD4_1438	PWY-6984	lipoate salvage II
YPD4_1438	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
YPD4_1438	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
YPD4_1441	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
YPD4_1441	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
YPD4_1441	PWY-6164	3-dehydroquinate biosynthesis I
YPD4_1443	PWY-5484	glycolysis II (from fructose 6-phosphate)
YPD4_1445	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
YPD4_1445	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
YPD4_1446	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
YPD4_1446	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
YPD4_1451	PWY-6823	molybdenum cofactor biosynthesis
YPD4_1451	PWY-6891	thiazole biosynthesis II (Bacillus)
YPD4_1451	PWY-6892	thiazole biosynthesis I (E. coli)
YPD4_1451	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
YPD4_1457	PWY-1042	glycolysis IV (plant cytosol)
YPD4_1457	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
YPD4_1457	PWY-5484	glycolysis II (from fructose 6-phosphate)
YPD4_1457	PWY-5723	Rubisco shunt
YPD4_1457	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
YPD4_1457	PWY-6886	1-butanol autotrophic biosynthesis
YPD4_1457	PWY-6901	superpathway of glucose and xylose degradation
YPD4_1457	PWY-7003	glycerol degradation to butanol
YPD4_1457	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
YPD4_1457	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
YPD4_1460	PWY-6167	flavin biosynthesis II (archaea)
YPD4_1460	PWY-6168	flavin biosynthesis III (fungi)
YPD4_1460	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
YPD4_1465	PWY-6854	ethylene biosynthesis III (microbes)
YPD4_1469	PWY-5386	methylglyoxal degradation I
YPD4_1479	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
YPD4_1479	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
YPD4_1481	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
YPD4_1481	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
YPD4_1534	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
YPD4_1535	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
YPD4_1556	PWY-7310	D-glucosaminate degradation
YPD4_1567	PWY-7431	aromatic biogenic amine degradation (bacteria)
YPD4_1571	PWY-5958	acridone alkaloid biosynthesis
YPD4_1571	PWY-6543	4-aminobenzoate biosynthesis
YPD4_1571	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
YPD4_1571	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
YPD4_1571	PWY-6722	candicidin biosynthesis
YPD4_1621	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
YPD4_1622	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
YPD4_1641	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
YPD4_1641	PWY-6853	ethylene biosynthesis II (microbes)
YPD4_1641	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
YPD4_1646	PWY-6785	hydrogen production VIII
YPD4_1653	PWY-5269	cardiolipin biosynthesis II
YPD4_1653	PWY-5668	cardiolipin biosynthesis I
YPD4_1683	PWY-3461	L-tyrosine biosynthesis II
YPD4_1683	PWY-3462	L-phenylalanine biosynthesis II
YPD4_1683	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
YPD4_1683	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
YPD4_1683	PWY-5901	2,3-dihydroxybenzoate biosynthesis
YPD4_1683	PWY-6120	L-tyrosine biosynthesis III
YPD4_1683	PWY-6406	salicylate biosynthesis I
YPD4_1683	PWY-6627	salinosporamide A biosynthesis
YPD4_1736	PWY-5028	L-histidine degradation II
YPD4_1736	PWY-5030	L-histidine degradation III
YPD4_1741	PWY-4381	fatty acid biosynthesis initiation I
YPD4_1742	PWY-4381	fatty acid biosynthesis initiation I
YPD4_1747	PWY-5129	sphingolipid biosynthesis (plants)
YPD4_1749	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
YPD4_1749	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
YPD4_1749	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
YPD4_1749	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
YPD4_1777	PWY-7560	methylerythritol phosphate pathway II
YPD4_1779	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
YPD4_1784	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
YPD4_1784	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
YPD4_1824	PWY-1042	glycolysis IV (plant cytosol)
YPD4_1824	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
YPD4_1824	PWY-5484	glycolysis II (from fructose 6-phosphate)
YPD4_1824	PWY-5723	Rubisco shunt
YPD4_1824	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
YPD4_1824	PWY-6886	1-butanol autotrophic biosynthesis
YPD4_1824	PWY-6901	superpathway of glucose and xylose degradation
YPD4_1824	PWY-7003	glycerol degradation to butanol
YPD4_1824	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
YPD4_1824	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
YPD4_1826	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
YPD4_1827	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
YPD4_1827	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
YPD4_1827	PWY-7242	D-fructuronate degradation
YPD4_1827	PWY-7310	D-glucosaminate degradation
YPD4_1880	PWY-6823	molybdenum cofactor biosynthesis
YPD4_1880	PWY-6891	thiazole biosynthesis II (Bacillus)
YPD4_1880	PWY-6892	thiazole biosynthesis I (E. coli)
YPD4_1880	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
YPD4_1895	PWY-2723	trehalose degradation V
YPD4_1895	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
YPD4_1895	PWY-5661	GDP-glucose biosynthesis
YPD4_1895	PWY-5940	streptomycin biosynthesis
YPD4_1895	PWY-621	sucrose degradation III (sucrose invertase)
YPD4_1895	PWY-622	starch biosynthesis
YPD4_1895	PWY-6731	starch degradation III
YPD4_1895	PWY-6737	starch degradation V
YPD4_1895	PWY-6981	chitin biosynthesis
YPD4_1895	PWY-7238	sucrose biosynthesis II
YPD4_1895	PWY-7343	UDP-glucose biosynthesis
YPD4_1896	PWY-1042	glycolysis IV (plant cytosol)
YPD4_1896	PWY-5484	glycolysis II (from fructose 6-phosphate)
YPD4_1896	PWY-6901	superpathway of glucose and xylose degradation
YPD4_1896	PWY-7003	glycerol degradation to butanol
YPD4_1903	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
YPD4_1909	PWY-2201	folate transformations I
YPD4_1909	PWY-5497	purine nucleobases degradation II (anaerobic)
YPD4_1912	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
YPD4_1914	PWY-7199	pyrimidine deoxyribonucleosides salvage
YPD4_1941	PWY-5958	acridone alkaloid biosynthesis
YPD4_1941	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
YPD4_1941	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
YPD4_1942	PWY-5958	acridone alkaloid biosynthesis
YPD4_1942	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
YPD4_1942	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
YPD4_1946	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
YPD4_1946	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
YPD4_1946	PWY-6268	adenosylcobalamin salvage from cobalamin
YPD4_1946	PWY-6269	adenosylcobalamin salvage from cobinamide II
YPD4_1953	PWY-6168	flavin biosynthesis III (fungi)
YPD4_1953	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
YPD4_1957	PWY-5686	UMP biosynthesis
YPD4_1959	PWY-6961	L-ascorbate degradation II (bacterial, aerobic)
YPD4_1960	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
YPD4_1960	PWY-5723	Rubisco shunt
YPD4_1989	PWY-3861	mannitol degradation II
YPD4_1989	PWY-3881	mannitol biosynthesis
YPD4_1989	PWY-5659	GDP-mannose biosynthesis
YPD4_1989	PWY-7456	mannan degradation
YPD4_1989	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
YPD4_1990	PWY-5392	reductive TCA cycle II
YPD4_1990	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
YPD4_1990	PWY-5690	TCA cycle II (plants and fungi)
YPD4_1990	PWY-5913	TCA cycle VI (obligate autotrophs)
YPD4_1990	PWY-6728	methylaspartate cycle
YPD4_1990	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
YPD4_1990	PWY-7254	TCA cycle VII (acetate-producers)
YPD4_1990	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
YPD4_1995	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
YPD4_2002	PWY-6617	adenosine nucleotides degradation III
YPD4_2007	PWY-5101	L-isoleucine biosynthesis II
YPD4_2007	PWY-5103	L-isoleucine biosynthesis III
YPD4_2007	PWY-5104	L-isoleucine biosynthesis IV
YPD4_2007	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
YPD4_2007	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
YPD4_2007	PWY-6389	(<i>S</i>)-acetoin biosynthesis
YPD4_2007	PWY-7111	pyruvate fermentation to isobutanol (engineered)
YPD4_2012	PWY-5491	diethylphosphate degradation
YPD4_2054	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
YPD4_2082	PWY-6807	xyloglucan degradation II (exoglucanase)
YPD4_2092	PWY-5913	TCA cycle VI (obligate autotrophs)
YPD4_2092	PWY-6549	L-glutamine biosynthesis III
YPD4_2092	PWY-6728	methylaspartate cycle
YPD4_2092	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
YPD4_2092	PWY-7124	ethylene biosynthesis V (engineered)
YPD4_2092	PWY-7254	TCA cycle VII (acetate-producers)
YPD4_2092	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
YPD4_2097	PWY-6123	inosine-5'-phosphate biosynthesis I
YPD4_2097	PWY-6124	inosine-5'-phosphate biosynthesis II
YPD4_2097	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
YPD4_2097	PWY-7234	inosine-5'-phosphate biosynthesis III
YPD4_2115	PWY-6902	chitin degradation II
YPD4_2116	PWY-6896	thiamin salvage I
YPD4_2120	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
YPD4_2122	PWY-7310	D-glucosaminate degradation
YPD4_2125	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
YPD4_2125	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
YPD4_2125	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
YPD4_2125	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
YPD4_2125	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
YPD4_2125	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
YPD4_2127	PWY-6543	4-aminobenzoate biosynthesis
YPD4_2127	PWY-6722	candicidin biosynthesis
YPD4_2131	PWY-4381	fatty acid biosynthesis initiation I
YPD4_2131	PWY-6799	fatty acid biosynthesis (plant mitochondria)
YPD4_2131	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
YPD4_2132	PWY-4381	fatty acid biosynthesis initiation I
YPD4_2140	PWY-5686	UMP biosynthesis
YPD4_2147	PWY-6157	autoinducer AI-1 biosynthesis
YPD4_2151	PWY-1723	formaldehyde oxidation V (H<sub>4</sub>MPT pathway)
YPD4_2151	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
YPD4_2168	PWY-6749	CMP-legionaminate biosynthesis I
YPD4_2211	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
YPD4_2211	PWY-2201	folate transformations I
YPD4_2211	PWY-3841	folate transformations II
YPD4_2211	PWY-5030	L-histidine degradation III
YPD4_2211	PWY-5497	purine nucleobases degradation II (anaerobic)
YPD4_2211	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
YPD4_2213	PWY-7183	pyrimidine nucleobases salvage I
YPD4_2214	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
YPD4_2214	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
YPD4_2214	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
YPD4_2215	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
YPD4_2215	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
YPD4_2244	PWY-6910	hydroxymethylpyrimidine salvage
YPD4_2244	PWY-7356	thiamin salvage IV (yeast)
YPD4_2244	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
YPD4_2252	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
YPD4_2253	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
YPD4_2253	PWY-6596	adenosine nucleotides degradation I
YPD4_2253	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
YPD4_2260	PWY-7560	methylerythritol phosphate pathway II
YPD4_2264	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
YPD4_2264	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
YPD4_2264	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
YPD4_2264	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
YPD4_2264	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
YPD4_2264	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
YPD4_2264	PWY-7205	CMP phosphorylation
YPD4_2264	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
YPD4_2264	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
YPD4_2264	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
YPD4_2264	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
YPD4_2264	PWY-7224	purine deoxyribonucleosides salvage
YPD4_2264	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
YPD4_2264	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
YPD4_2270	PWY-5988	wound-induced proteolysis I
YPD4_2270	PWY-6018	seed germination protein turnover
YPD4_2280	PWY-2301	<i>myo</i>-inositol biosynthesis
YPD4_2280	PWY-4702	phytate degradation I
YPD4_2280	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
YPD4_2288	PWY-1622	formaldehyde assimilation I (serine pathway)
YPD4_2288	PWY-181	photorespiration
YPD4_2288	PWY-2161	folate polyglutamylation
YPD4_2288	PWY-2201	folate transformations I
YPD4_2288	PWY-3661	glycine betaine degradation I
YPD4_2288	PWY-3661-1	glycine betaine degradation II (mammalian)
YPD4_2288	PWY-3841	folate transformations II
YPD4_2288	PWY-5497	purine nucleobases degradation II (anaerobic)
YPD4_2300	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
YPD4_2300	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
YPD4_2300	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
YPD4_2303	PWY-5269	cardiolipin biosynthesis II
YPD4_2303	PWY-5668	cardiolipin biosynthesis I
YPD4_2307	PWY-6012	acyl carrier protein metabolism I
YPD4_2307	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
YPD4_2321	PWY-5316	nicotine biosynthesis
YPD4_2321	PWY-7342	superpathway of nicotine biosynthesis
YPD4_2334	PWY-5663	tetrahydrobiopterin biosynthesis I
YPD4_2334	PWY-5664	tetrahydrobiopterin biosynthesis II
YPD4_2334	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
YPD4_2334	PWY-6703	preQ<sub>0</sub> biosynthesis
YPD4_2334	PWY-6983	tetrahydrobiopterin biosynthesis III
YPD4_2334	PWY-7442	drosopterin and aurodrosopterin biosynthesis
YPD4_2344	PWY-2723	trehalose degradation V
YPD4_2344	PWY-3801	sucrose degradation II (sucrose synthase)
YPD4_2344	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
YPD4_2344	PWY-5661	GDP-glucose biosynthesis
YPD4_2344	PWY-5661-1	YPD4_2344
YPD4_2344	PWY-5940	streptomycin biosynthesis
YPD4_2344	PWY-5941	glycogen degradation II (eukaryotic)
YPD4_2344	PWY-622	starch biosynthesis
YPD4_2344	PWY-6731	starch degradation III
YPD4_2344	PWY-6737	starch degradation V
YPD4_2344	PWY-6749	CMP-legionaminate biosynthesis I
YPD4_2344	PWY-7238	sucrose biosynthesis II
YPD4_2344	PWY-7343	UDP-glucose biosynthesis
YPD4_2349	PWY-7310	D-glucosaminate degradation
YPD4_2350	PWY-7310	D-glucosaminate degradation
YPD4_2361	PWY-5704	urea degradation II
YPD4_2362	PWY-5704	urea degradation II
YPD4_2363	PWY-5704	urea degradation II
YPD4_2374	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
YPD4_2374	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
YPD4_2374	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
YPD4_2374	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
YPD4_2374	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
YPD4_2374	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
YPD4_2374	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
YPD4_2374	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
YPD4_2375	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
YPD4_2375	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
YPD4_2375	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
YPD4_2375	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
YPD4_2375	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
YPD4_2375	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
YPD4_2375	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
YPD4_2375	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
YPD4_2376	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
YPD4_2376	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
YPD4_2376	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
YPD4_2376	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
YPD4_2376	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
YPD4_2376	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
YPD4_2376	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
YPD4_2376	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
YPD4_2387	PWY-6902	chitin degradation II
YPD4_2388	PWY-6902	chitin degradation II
YPD4_2390	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
YPD4_2392	PWY-7310	D-glucosaminate degradation
YPD4_2393	PWY-7310	D-glucosaminate degradation
YPD4_2394	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
YPD4_2394	PWY-6855	chitin degradation I (archaea)
YPD4_2394	PWY-6906	chitin derivatives degradation
YPD4_2395	PWY-6906	chitin derivatives degradation
YPD4_2395	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
YPD4_2395	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
YPD4_2413	PWY-5381	pyridine nucleotide cycling (plants)
YPD4_2413	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
YPD4_2420	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
YPD4_2420	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
YPD4_2421	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
YPD4_2421	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
YPD4_2422	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
YPD4_2422	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
YPD4_2422	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
YPD4_2429	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
YPD4_2439	PWY-5642	2,4-dinitrotoluene degradation
YPD4_2439	PWY-6373	acrylate degradation
YPD4_2447	PWY-1281	sulfoacetaldehyde degradation I
YPD4_2447	PWY-5482	pyruvate fermentation to acetate II
YPD4_2447	PWY-5485	pyruvate fermentation to acetate IV
YPD4_2447	PWY-5497	purine nucleobases degradation II (anaerobic)
YPD4_2447	PWY-6637	sulfolactate degradation II
YPD4_2448	PWY-5482	pyruvate fermentation to acetate II
YPD4_2448	PWY-5485	pyruvate fermentation to acetate IV
YPD4_2448	PWY-5497	purine nucleobases degradation II (anaerobic)
YPD4_2471	PWY-5530	sorbitol biosynthesis II
YPD4_2471	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
YPD4_2478	PWY-5101	L-isoleucine biosynthesis II
YPD4_2478	PWY-5103	L-isoleucine biosynthesis III
YPD4_2478	PWY-5104	L-isoleucine biosynthesis IV
YPD4_2478	PWY-7111	pyruvate fermentation to isobutanol (engineered)
YPD4_2481	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
YPD4_2481	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
YPD4_2481	PWY-5901	2,3-dihydroxybenzoate biosynthesis
YPD4_2481	PWY-6406	salicylate biosynthesis I
YPD4_2482	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
YPD4_2482	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
YPD4_2483	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
YPD4_2483	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
YPD4_2484	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
YPD4_2484	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
YPD4_2485	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
YPD4_2485	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
YPD4_2486	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
YPD4_2486	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
YPD4_2518	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
YPD4_2518	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
YPD4_2518	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
YPD4_2518	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
YPD4_2521	PWY-2161	folate polyglutamylation
YPD4_2522	PWY-4381	fatty acid biosynthesis initiation I
YPD4_2522	PWY-5743	3-hydroxypropanoate cycle
YPD4_2522	PWY-5744	glyoxylate assimilation
YPD4_2522	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
YPD4_2522	PWY-6679	jadomycin biosynthesis
YPD4_2522	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
YPD4_2525	PWY-2941	L-lysine biosynthesis II
YPD4_2525	PWY-2942	L-lysine biosynthesis III
YPD4_2525	PWY-5097	L-lysine biosynthesis VI
YPD4_2525	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
YPD4_2525	PWY-6559	spermidine biosynthesis II
YPD4_2525	PWY-6562	norspermidine biosynthesis
YPD4_2525	PWY-7153	grixazone biosynthesis
YPD4_2525	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
YPD4_2531	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
YPD4_2531	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
YPD4_2538	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
YPD4_2542	PWY-1361	benzoyl-CoA degradation I (aerobic)
YPD4_2542	PWY-5109	2-methylbutanoate biosynthesis
YPD4_2542	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
YPD4_2542	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
YPD4_2542	PWY-5177	glutaryl-CoA degradation
YPD4_2542	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
YPD4_2542	PWY-6435	4-hydroxybenzoate biosynthesis V
YPD4_2542	PWY-6583	pyruvate fermentation to butanol I
YPD4_2542	PWY-6863	pyruvate fermentation to hexanol
YPD4_2542	PWY-6883	pyruvate fermentation to butanol II
YPD4_2542	PWY-6944	androstenedione degradation
YPD4_2542	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
YPD4_2542	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
YPD4_2542	PWY-7007	methyl ketone biosynthesis
YPD4_2542	PWY-7046	4-coumarate degradation (anaerobic)
YPD4_2542	PWY-7094	fatty acid salvage
YPD4_2542	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
YPD4_2542	PWY-735	jasmonic acid biosynthesis
YPD4_2542	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
YPD4_2543	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
YPD4_2543	PWY-6435	4-hydroxybenzoate biosynthesis V
YPD4_2543	PWY-6863	pyruvate fermentation to hexanol
YPD4_2543	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
YPD4_2543	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
YPD4_2543	PWY-6948	sitosterol degradation to androstenedione
YPD4_2543	PWY-7094	fatty acid salvage
YPD4_2543	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
YPD4_2543	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
YPD4_2543	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
YPD4_2543	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
YPD4_2543	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
YPD4_2543	PWY-735	jasmonic acid biosynthesis
YPD4_2608	PWY-2723	trehalose degradation V
YPD4_2608	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
YPD4_2608	PWY-5661	GDP-glucose biosynthesis
YPD4_2608	PWY-7238	sucrose biosynthesis II
YPD4_2608	PWY-7385	1,3-propanediol biosynthesis (engineered)
YPD4_2615	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
YPD4_2622	PWY-6936	seleno-amino acid biosynthesis
YPD4_2633	PWY-6936	seleno-amino acid biosynthesis
YPD4_2638	PWY-6936	seleno-amino acid biosynthesis
YPD4_2646	PWY-6138	CMP-<i>N</i>-acetylneuraminate biosynthesis I (eukaryotes)
YPD4_2650	PWY-2941	L-lysine biosynthesis II
YPD4_2650	PWY-2942	L-lysine biosynthesis III
YPD4_2650	PWY-5097	L-lysine biosynthesis VI
YPD4_2657	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
YPD4_2657	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
YPD4_2659	PWY-1281	sulfoacetaldehyde degradation I
YPD4_2659	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
YPD4_2659	PWY-5482	pyruvate fermentation to acetate II
YPD4_2659	PWY-5485	pyruvate fermentation to acetate IV
YPD4_2659	PWY-5497	purine nucleobases degradation II (anaerobic)
YPD4_2659	PWY-6637	sulfolactate degradation II
YPD4_2659	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
YPD4_2682	PWY-6123	inosine-5'-phosphate biosynthesis I
YPD4_2682	PWY-6124	inosine-5'-phosphate biosynthesis II
YPD4_2682	PWY-7234	inosine-5'-phosphate biosynthesis III
YPD4_2685	PWY-2941	L-lysine biosynthesis II
YPD4_2685	PWY-2942	L-lysine biosynthesis III
YPD4_2685	PWY-5097	L-lysine biosynthesis VI
YPD4_2691	PWY-4202	arsenate detoxification I (glutaredoxin)
YPD4_2691	PWY-4621	arsenate detoxification II (glutaredoxin)
YPD4_2697	PWY-6123	inosine-5'-phosphate biosynthesis I
YPD4_2697	PWY-7234	inosine-5'-phosphate biosynthesis III
YPD4_2717	PWY-6749	CMP-legionaminate biosynthesis I
YPD4_2719	PWY-5659	GDP-mannose biosynthesis
YPD4_2719	PWY-6073	alginate biosynthesis I (algal)
YPD4_2719	PWY-6082	alginate biosynthesis II (bacterial)
YPD4_2719	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
YPD4_2720	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
YPD4_2731	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
YPD4_2732	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
YPD4_2732	PWY-5940	streptomycin biosynthesis
YPD4_2735	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
YPD4_2740	PWY-6605	adenine and adenosine salvage II
YPD4_2740	PWY-6610	adenine and adenosine salvage IV
YPD4_2761	PWY-6703	preQ<sub>0</sub> biosynthesis
YPD4_2775	PWY-3781	aerobic respiration I (cytochrome c)
YPD4_2775	PWY-4521	arsenite oxidation I (respiratory)
YPD4_2775	PWY-6692	Fe(II) oxidation
YPD4_2775	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
YPD4_2775	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
YPD4_2781	PWY-6654	phosphopantothenate biosynthesis III
YPD4_2785	PWY-6891	thiazole biosynthesis II (Bacillus)
YPD4_2785	PWY-6892	thiazole biosynthesis I (E. coli)
YPD4_2785	PWY-7560	methylerythritol phosphate pathway II
YPD4_2787	PWY-5269	cardiolipin biosynthesis II
YPD4_2787	PWY-5668	cardiolipin biosynthesis I
YPD4_2788	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
YPD4_2788	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
YPD4_2788	PWY-6896	thiamin salvage I
YPD4_2788	PWY-6897	thiamin salvage II
YPD4_2790	PWY-6167	flavin biosynthesis II (archaea)
YPD4_2790	PWY-6168	flavin biosynthesis III (fungi)
YPD4_2798	PWY-6700	queuosine biosynthesis
YPD4_2799	PWY-6700	queuosine biosynthesis
YPD4_2800	PWY-6012	acyl carrier protein metabolism I
YPD4_2802	PWY-4041	&gamma;-glutamyl cycle
YPD4_2802	PWY-5826	hypoglycin biosynthesis
YPD4_2804	PWY-842	starch degradation I
YPD4_2814	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
YPD4_2837	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
YPD4_2853	PWY-5169	cyanurate degradation
YPD4_2853	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
YPD4_2864	PWY-5392	reductive TCA cycle II
YPD4_2864	PWY-5537	pyruvate fermentation to acetate V
YPD4_2864	PWY-5538	pyruvate fermentation to acetate VI
YPD4_2864	PWY-5690	TCA cycle II (plants and fungi)
YPD4_2864	PWY-5913	TCA cycle VI (obligate autotrophs)
YPD4_2864	PWY-6728	methylaspartate cycle
YPD4_2864	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
YPD4_2864	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
YPD4_2865	PWY-5269	cardiolipin biosynthesis II
YPD4_2865	PWY-5668	cardiolipin biosynthesis I
YPD4_2875	PWY-3461	L-tyrosine biosynthesis II
YPD4_2875	PWY-3462	L-phenylalanine biosynthesis II
YPD4_2875	PWY-6120	L-tyrosine biosynthesis III
YPD4_2875	PWY-6627	salinosporamide A biosynthesis
YPD4_2875	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
YPD4_2876	PWY-3461	L-tyrosine biosynthesis II
YPD4_2876	PWY-3462	L-phenylalanine biosynthesis II
YPD4_2876	PWY-6120	L-tyrosine biosynthesis III
YPD4_2876	PWY-6627	salinosporamide A biosynthesis
YPD4_2876	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
YPD4_2877	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
YPD4_2877	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
YPD4_2877	PWY-6164	3-dehydroquinate biosynthesis I
YPD4_2878	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
YPD4_2878	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
YPD4_2878	PWY-6164	3-dehydroquinate biosynthesis I
YPD4_2885	PWY-6829	tRNA methylation (yeast)
YPD4_2885	PWY-7285	methylwyosine biosynthesis
YPD4_2885	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
YPD4_2891	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
YPD4_2891	PWY-6153	autoinducer AI-2 biosynthesis I
YPD4_2891	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
YPD4_2892	PWY-6840	homoglutathione biosynthesis
YPD4_2892	PWY-7255	ergothioneine biosynthesis I (bacteria)
YPD4_2902	PWY-4261	glycerol degradation I
YPD4_2904	PWY-6891	thiazole biosynthesis II (Bacillus)
YPD4_2904	PWY-6892	thiazole biosynthesis I (E. coli)
YPD4_2904	PWY-7560	methylerythritol phosphate pathway II
YPD4_2915	PWY-6961	L-ascorbate degradation II (bacterial, aerobic)
YPD4_2921	PWY-6961	L-ascorbate degradation II (bacterial, aerobic)
YPD4_2922	PWY-4261	glycerol degradation I
YPD4_2923	PWY-5392	reductive TCA cycle II
YPD4_2923	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
YPD4_2923	PWY-5690	TCA cycle II (plants and fungi)
YPD4_2923	PWY-5913	TCA cycle VI (obligate autotrophs)
YPD4_2923	PWY-6728	methylaspartate cycle
YPD4_2923	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
YPD4_2923	PWY-7254	TCA cycle VII (acetate-producers)
YPD4_2923	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
YPD4_2943	PWY-5381	pyridine nucleotide cycling (plants)
YPD4_2943	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
YPD4_2943	PWY-6596	adenosine nucleotides degradation I
YPD4_2943	PWY-6606	guanosine nucleotides degradation II
YPD4_2943	PWY-6607	guanosine nucleotides degradation I
YPD4_2943	PWY-6608	guanosine nucleotides degradation III
YPD4_2943	PWY-7185	UTP and CTP dephosphorylation I
YPD4_2945	PWY-7560	methylerythritol phosphate pathway II
YPD4_2946	PWY-7560	methylerythritol phosphate pathway II
YPD4_2949	PWY-5340	sulfate activation for sulfonation
YPD4_2950	PWY-5278	sulfite oxidation III
YPD4_2950	PWY-5340	sulfate activation for sulfonation
YPD4_2950	PWY-6683	sulfate reduction III (assimilatory)
YPD4_2950	PWY-6932	selenate reduction
YPD4_2951	PWY-5278	sulfite oxidation III
YPD4_2951	PWY-5340	sulfate activation for sulfonation
YPD4_2951	PWY-6683	sulfate reduction III (assimilatory)
YPD4_2951	PWY-6932	selenate reduction
YPD4_2952	PWY-5194	siroheme biosynthesis
YPD4_2952	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
YPD4_2955	PWY-6683	sulfate reduction III (assimilatory)
YPD4_2956	PWY-6683	sulfate reduction III (assimilatory)
YPD4_2958	PWY-6703	preQ<sub>0</sub> biosynthesis
YPD4_2959	PWY-6854	ethylene biosynthesis III (microbes)
YPD4_2960	PWY-1042	glycolysis IV (plant cytosol)
YPD4_2960	PWY-1622	formaldehyde assimilation I (serine pathway)
YPD4_2960	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
YPD4_2960	PWY-5484	glycolysis II (from fructose 6-phosphate)
YPD4_2960	PWY-5723	Rubisco shunt
YPD4_2960	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
YPD4_2960	PWY-6886	1-butanol autotrophic biosynthesis
YPD4_2960	PWY-6901	superpathway of glucose and xylose degradation
YPD4_2960	PWY-7003	glycerol degradation to butanol
YPD4_2960	PWY-7124	ethylene biosynthesis V (engineered)
YPD4_2960	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
YPD4_2961	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
YPD4_2961	PWY-7177	UTP and CTP dephosphorylation II
YPD4_2961	PWY-7185	UTP and CTP dephosphorylation I
YPD4_2968	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
YPD4_2968	PWY-6153	autoinducer AI-2 biosynthesis I
YPD4_2968	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
YPD4_2973	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
YPD4_2977	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
YPD4_2977	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
YPD4_2977	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
YPD4_2977	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
YPD4_2984	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
YPD4_2984	PWY-6148	tetrahydromethanopterin biosynthesis
YPD4_2984	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
YPD4_2984	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
YPD4_2985	PWY-6654	phosphopantothenate biosynthesis III
YPD4_2987	PWY-5155	&beta;-alanine biosynthesis III
YPD4_2991	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
YPD4_2991	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
YPD4_2991	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
YPD4_2991	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
YPD4_2992	PWY-6599	guanine and guanosine salvage II
YPD4_2992	PWY-6609	adenine and adenosine salvage III
YPD4_2992	PWY-6610	adenine and adenosine salvage IV
YPD4_2992	PWY-6620	guanine and guanosine salvage
YPD4_2996	PWY-6834	spermidine biosynthesis III
YPD4_2999	PWY-5747	2-methylcitrate cycle II
YPD4_3001	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
YPD4_3001	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
YPD4_3003	PWY-6891	thiazole biosynthesis II (Bacillus)
YPD4_3003	PWY-6892	thiazole biosynthesis I (E. coli)
YPD4_3003	PWY-7560	methylerythritol phosphate pathway II
YPD4_3008	PWY-5316	nicotine biosynthesis
YPD4_3008	PWY-5381	pyridine nucleotide cycling (plants)
YPD4_3008	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
YPD4_3008	PWY-7342	superpathway of nicotine biosynthesis
YPD4_3024	PWY-5988	wound-induced proteolysis I
YPD4_3024	PWY-6018	seed germination protein turnover
YPD4_3029	PWY-4981	L-proline biosynthesis II (from arginine)
YPD4_3029	PWY-4984	urea cycle
YPD4_3029	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
YPD4_3037	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
YPD4_3037	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
YPD4_3037	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
YPD4_3040	PWY-7399	methylphosphonate degradation II
YPD4_3043	PWY-7399	methylphosphonate degradation II
YPD4_3045	PWY-7399	methylphosphonate degradation II
YPD4_3046	PWY-7399	methylphosphonate degradation II
YPD4_3047	PWY-5532	adenosine nucleotides degradation IV
YPD4_3051	PWY-6986	alginate degradation
YPD4_3056	PWY-6986	alginate degradation
YPD4_3057	PWY-6986	alginate degradation
YPD4_3060	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
YPD4_3060	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
YPD4_3060	PWY-6897	thiamin salvage II
YPD4_3060	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
YPD4_3060	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
YPD4_3060	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
YPD4_3060	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
YPD4_3100	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
YPD4_3114	PWY-4261	glycerol degradation I
YPD4_3133	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
YPD4_3133	PWY-6416	quinate degradation II
YPD4_3133	PWY-6707	gallate biosynthesis
YPD4_3168	PWY-7310	D-glucosaminate degradation
YPD4_3173	PWY-5686	UMP biosynthesis
YPD4_3180	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
YPD4_3180	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
YPD4_3188	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
YPD4_3188	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
YPD4_3212	PWY-4061	glutathione-mediated detoxification I
YPD4_3212	PWY-6842	glutathione-mediated detoxification II
YPD4_3212	PWY-7112	4-hydroxy-2-nonenal detoxification
YPD4_3212	PWY-7533	gliotoxin biosynthesis
YPD4_3234	PWY-5484	glycolysis II (from fructose 6-phosphate)
YPD4_3237	PWY-1622	formaldehyde assimilation I (serine pathway)
YPD4_3237	PWY-5392	reductive TCA cycle II
YPD4_3237	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
YPD4_3237	PWY-5690	TCA cycle II (plants and fungi)
YPD4_3237	PWY-5913	TCA cycle VI (obligate autotrophs)
YPD4_3237	PWY-6728	methylaspartate cycle
YPD4_3237	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
YPD4_3237	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
YPD4_3237	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
YPD4_3245	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
YPD4_3245	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
YPD4_3250	PWY-6614	tetrahydrofolate biosynthesis
YPD4_3251	PWY-6749	CMP-legionaminate biosynthesis I
YPD4_3270	PWY-3801	sucrose degradation II (sucrose synthase)
YPD4_3270	PWY-5054	sorbitol biosynthesis I
YPD4_3270	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
YPD4_3270	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
YPD4_3270	PWY-5659	GDP-mannose biosynthesis
YPD4_3270	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
YPD4_3270	PWY-621	sucrose degradation III (sucrose invertase)
YPD4_3270	PWY-622	starch biosynthesis
YPD4_3270	PWY-6531	mannitol cycle
YPD4_3270	PWY-6981	chitin biosynthesis
YPD4_3270	PWY-7238	sucrose biosynthesis II
YPD4_3270	PWY-7347	sucrose biosynthesis III
YPD4_3270	PWY-7385	1,3-propanediol biosynthesis (engineered)
YPD4_3271	PWY-2941	L-lysine biosynthesis II
YPD4_3271	PWY-2942	L-lysine biosynthesis III
YPD4_3271	PWY-5097	L-lysine biosynthesis VI
YPD4_3271	PWY-6559	spermidine biosynthesis II
YPD4_3271	PWY-6562	norspermidine biosynthesis
YPD4_3271	PWY-7153	grixazone biosynthesis
YPD4_3275	PWY-2201	folate transformations I
YPD4_3275	PWY-3841	folate transformations II
YPD4_3279	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
YPD4_3280	PWY-6728	methylaspartate cycle
YPD4_3280	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
YPD4_3280	PWY-7118	chitin degradation to ethanol
YPD4_3280	PWY-7294	xylose degradation IV
YPD4_3280	PWY-7295	L-arabinose degradation IV
YPD4_3282	PWY-6123	inosine-5'-phosphate biosynthesis I
YPD4_3282	PWY-6124	inosine-5'-phosphate biosynthesis II
YPD4_3282	PWY-7234	inosine-5'-phosphate biosynthesis III
YPD4_3283	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
YPD4_3283	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
YPD4_3283	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
YPD4_3287	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
YPD4_3287	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
YPD4_3289	PWY-5381	pyridine nucleotide cycling (plants)
YPD4_3291	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
YPD4_3292	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
YPD4_3292	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
YPD4_3292	PWY-6897	thiamin salvage II
YPD4_3292	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
YPD4_3292	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
YPD4_3292	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
YPD4_3292	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
YPD4_3294	PWY-6891	thiazole biosynthesis II (Bacillus)
YPD4_3294	PWY-6892	thiazole biosynthesis I (E. coli)
YPD4_3295	PWY-6892	thiazole biosynthesis I (E. coli)
YPD4_3295	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
YPD4_3308	PWY-3961	phosphopantothenate biosynthesis II
YPD4_3309	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
YPD4_3309	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
YPD4_3310	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
YPD4_3310	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
YPD4_3315	PWY-1361	benzoyl-CoA degradation I (aerobic)
YPD4_3315	PWY-5109	2-methylbutanoate biosynthesis
YPD4_3315	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
YPD4_3315	PWY-5137	fatty acid &beta;-oxidation III (unsaturated, odd number)
YPD4_3315	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
YPD4_3315	PWY-5177	glutaryl-CoA degradation
YPD4_3315	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
YPD4_3315	PWY-6435	4-hydroxybenzoate biosynthesis V
YPD4_3315	PWY-6583	pyruvate fermentation to butanol I
YPD4_3315	PWY-6837	fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)
YPD4_3315	PWY-6863	pyruvate fermentation to hexanol
YPD4_3315	PWY-6883	pyruvate fermentation to butanol II
YPD4_3315	PWY-6944	androstenedione degradation
YPD4_3315	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
YPD4_3315	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
YPD4_3315	PWY-7007	methyl ketone biosynthesis
YPD4_3315	PWY-7046	4-coumarate degradation (anaerobic)
YPD4_3315	PWY-7094	fatty acid salvage
YPD4_3315	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
YPD4_3315	PWY-7291	oleate &beta;-oxidation (isomerase-dependent, yeast)
YPD4_3315	PWY-735	jasmonic acid biosynthesis
YPD4_3315	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
YPD4_3316	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
YPD4_3316	PWY-6435	4-hydroxybenzoate biosynthesis V
YPD4_3316	PWY-6863	pyruvate fermentation to hexanol
YPD4_3316	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
YPD4_3316	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
YPD4_3316	PWY-6948	sitosterol degradation to androstenedione
YPD4_3316	PWY-7094	fatty acid salvage
YPD4_3316	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
YPD4_3316	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
YPD4_3316	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
YPD4_3316	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
YPD4_3316	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
YPD4_3316	PWY-735	jasmonic acid biosynthesis
YPD4_3320	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
YPD4_3320	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
YPD4_3329	PWY-5839	menaquinol-7 biosynthesis
YPD4_3329	PWY-5844	menaquinol-9 biosynthesis
YPD4_3329	PWY-5849	menaquinol-6 biosynthesis
YPD4_3329	PWY-5890	menaquinol-10 biosynthesis
YPD4_3329	PWY-5891	menaquinol-11 biosynthesis
YPD4_3329	PWY-5892	menaquinol-12 biosynthesis
YPD4_3329	PWY-5895	menaquinol-13 biosynthesis
YPD4_3334	PWY-4202	arsenate detoxification I (glutaredoxin)
YPD4_3334	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
YPD4_3334	PWY-6608	guanosine nucleotides degradation III
YPD4_3334	PWY-6609	adenine and adenosine salvage III
YPD4_3334	PWY-6611	adenine and adenosine salvage V
YPD4_3334	PWY-6620	guanine and guanosine salvage
YPD4_3334	PWY-6627	salinosporamide A biosynthesis
YPD4_3334	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
YPD4_3334	PWY-7179	purine deoxyribonucleosides degradation I
YPD4_3334	PWY-7179-1	purine deoxyribonucleosides degradation
YPD4_3336	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
YPD4_3336	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
YPD4_3336	PWY-6936	seleno-amino acid biosynthesis
YPD4_3336	PWY-702	L-methionine biosynthesis II
YPD4_3371	PWY-4261	glycerol degradation I
YPD4_3371	PWY-6118	glycerol-3-phosphate shuttle
YPD4_3371	PWY-6952	glycerophosphodiester degradation
YPD4_3372	PWY-4261	glycerol degradation I
YPD4_3372	PWY-6118	glycerol-3-phosphate shuttle
YPD4_3372	PWY-6952	glycerophosphodiester degradation
YPD4_3380	PWY-6803	phosphatidylcholine acyl editing
YPD4_3380	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
YPD4_3380	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
YPD4_3380	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
YPD4_3392	PWY-2941	L-lysine biosynthesis II
YPD4_3392	PWY-5097	L-lysine biosynthesis VI
YPD4_3395	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
YPD4_3395	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
YPD4_3396	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
YPD4_3396	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
YPD4_3405	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
YPD4_3406	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
YPD4_3407	PWY-3221	dTDP-L-rhamnose biosynthesis II
YPD4_3407	PWY-6808	dTDP-D-forosamine biosynthesis
YPD4_3407	PWY-6942	dTDP-D-desosamine biosynthesis
YPD4_3407	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
YPD4_3407	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
YPD4_3407	PWY-6974	dTDP-L-olivose biosynthesis
YPD4_3407	PWY-6976	dTDP-L-mycarose biosynthesis
YPD4_3407	PWY-7104	dTDP-L-megosamine biosynthesis
YPD4_3407	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
YPD4_3407	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
YPD4_3407	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
YPD4_3407	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
YPD4_3407	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
YPD4_3407	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
YPD4_3407	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
YPD4_3407	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
YPD4_3408	PWY-3221	dTDP-L-rhamnose biosynthesis II
YPD4_3408	PWY-6808	dTDP-D-forosamine biosynthesis
YPD4_3408	PWY-6942	dTDP-D-desosamine biosynthesis
YPD4_3408	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
YPD4_3408	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
YPD4_3408	PWY-6974	dTDP-L-olivose biosynthesis
YPD4_3408	PWY-6976	dTDP-L-mycarose biosynthesis
YPD4_3408	PWY-7104	dTDP-L-megosamine biosynthesis
YPD4_3408	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
YPD4_3408	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
YPD4_3408	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
YPD4_3408	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
YPD4_3408	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
YPD4_3408	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
YPD4_3408	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
YPD4_3408	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
YPD4_3410	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
YPD4_3412	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
YPD4_3412	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
YPD4_3412	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
YPD4_3412	PWY-7290	<i>Escherichia coli</i> serotype O86 <i>O</i>-antigen biosynthesis
YPD4_3412	PWY-7530	&beta;-D-galactosaminyl-(1&rarr;3)-<i>N</i>-acetyl-&alpha;-D-galactosamine biosynthesis
YPD4_3413	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
YPD4_3426	PWY-5101	L-isoleucine biosynthesis II
YPD4_3426	PWY-5103	L-isoleucine biosynthesis III
YPD4_3426	PWY-5104	L-isoleucine biosynthesis IV
YPD4_3426	PWY-7111	pyruvate fermentation to isobutanol (engineered)
YPD4_3433	PWY-5101	L-isoleucine biosynthesis II
YPD4_3433	PWY-5103	L-isoleucine biosynthesis III
YPD4_3433	PWY-5104	L-isoleucine biosynthesis IV
YPD4_3433	PWY-7111	pyruvate fermentation to isobutanol (engineered)
YPD4_3434	PWY-5057	L-valine degradation II
YPD4_3434	PWY-5076	L-leucine degradation III
YPD4_3434	PWY-5078	L-isoleucine degradation II
YPD4_3434	PWY-5101	L-isoleucine biosynthesis II
YPD4_3434	PWY-5103	L-isoleucine biosynthesis III
YPD4_3434	PWY-5104	L-isoleucine biosynthesis IV
YPD4_3434	PWY-5108	L-isoleucine biosynthesis V
YPD4_3435	PWY-5101	L-isoleucine biosynthesis II
YPD4_3435	PWY-5103	L-isoleucine biosynthesis III
YPD4_3435	PWY-5104	L-isoleucine biosynthesis IV
YPD4_3435	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
YPD4_3435	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
YPD4_3435	PWY-6389	(<i>S</i>)-acetoin biosynthesis
YPD4_3435	PWY-7111	pyruvate fermentation to isobutanol (engineered)
YPD4_3443	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
YPD4_3443	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
YPD4_3448	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
YPD4_3457	PWY-4983	L-citrulline-nitric oxide cycle
YPD4_3457	PWY-4984	urea cycle
YPD4_3457	PWY-5	canavanine biosynthesis
YPD4_3457	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
YPD4_3457	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
YPD4_3458	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
YPD4_3458	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
YPD4_3459	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
YPD4_3459	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
YPD4_3460	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
YPD4_3461	PWY-1622	formaldehyde assimilation I (serine pathway)
YPD4_3461	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
YPD4_3461	PWY-5913	TCA cycle VI (obligate autotrophs)
YPD4_3461	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
YPD4_3461	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
YPD4_3461	PWY-6549	L-glutamine biosynthesis III
YPD4_3461	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
YPD4_3461	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
YPD4_3461	PWY-7124	ethylene biosynthesis V (engineered)
YPD4_3465	PWY-4261	glycerol degradation I
YPD4_3465	PWY-6118	glycerol-3-phosphate shuttle
YPD4_3465	PWY-6952	glycerophosphodiester degradation
YPD4_3466	PWY-5941	glycogen degradation II (eukaryotic)
YPD4_3466	PWY-622	starch biosynthesis
YPD4_3466	PWY-6731	starch degradation III
YPD4_3466	PWY-6737	starch degradation V
YPD4_3466	PWY-7238	sucrose biosynthesis II
YPD4_3467	PWY-622	starch biosynthesis
YPD4_3468	PWY-622	starch biosynthesis
YPD4_3470	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
YPD4_3470	PWY-622	starch biosynthesis
YPD4_3473	PWY-2941	L-lysine biosynthesis II
YPD4_3473	PWY-2942	L-lysine biosynthesis III
YPD4_3473	PWY-5097	L-lysine biosynthesis VI
YPD4_3473	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
YPD4_3473	PWY-6559	spermidine biosynthesis II
YPD4_3473	PWY-6562	norspermidine biosynthesis
YPD4_3473	PWY-7153	grixazone biosynthesis
YPD4_3473	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
YPD4_3476	PWY-5530	sorbitol biosynthesis II
YPD4_3476	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
YPD4_3498	PWY-4081	glutathione redox reactions I
YPD4_3517	PWY-6788	cellulose degradation II (fungi)
YPD4_3534	PWY-5028	L-histidine degradation II
YPD4_3534	PWY-5030	L-histidine degradation III
YPD4_3535	PWY-5028	L-histidine degradation II
YPD4_3535	PWY-5030	L-histidine degradation III
YPD4_3553	PWY-4261	glycerol degradation I
YPD4_3574	PWY-6854	ethylene biosynthesis III (microbes)
YPD4_3582	PWY-7310	D-glucosaminate degradation
YPD4_3590	PWY-1622	formaldehyde assimilation I (serine pathway)
YPD4_3591	PWY-842	starch degradation I
YPD4_3625	PWY-6749	CMP-legionaminate biosynthesis I
YPD4_3626	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
YPD4_3628	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
YPD4_3630	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis