Halar_0720 PWY-1281 sulfoacetaldehyde degradation I Halar_0720 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type Halar_0720 PWY-5482 pyruvate fermentation to acetate II Halar_0720 PWY-5485 pyruvate fermentation to acetate IV Halar_0720 PWY-5497 purine nucleobases degradation II (anaerobic) Halar_0720 PWY-6637 sulfolactate degradation II Halar_0720 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type Halar_0736 PWY-6482 diphthamide biosynthesis (archaea) Halar_0736 PWY-7546 diphthamide biosynthesis (eukaryotes) Halar_0750 PWY-5484 glycolysis II (from fructose 6-phosphate) Halar_0753 PWY-1361 benzoyl-CoA degradation I (aerobic) Halar_0753 PWY-5109 2-methylbutanoate biosynthesis Halar_0753 PWY-5136 fatty acid β-oxidation II (peroxisome) Halar_0753 PWY-5138 unsaturated, even numbered fatty acid β-oxidation Halar_0753 PWY-5177 glutaryl-CoA degradation Halar_0753 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Halar_0753 PWY-6435 4-hydroxybenzoate biosynthesis V Halar_0753 PWY-6583 pyruvate fermentation to butanol I Halar_0753 PWY-6863 pyruvate fermentation to hexanol Halar_0753 PWY-6883 pyruvate fermentation to butanol II Halar_0753 PWY-6944 androstenedione degradation Halar_0753 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) Halar_0753 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) Halar_0753 PWY-7007 methyl ketone biosynthesis Halar_0753 PWY-7046 4-coumarate degradation (anaerobic) Halar_0753 PWY-7094 fatty acid salvage Halar_0753 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis Halar_0753 PWY-735 jasmonic acid biosynthesis Halar_0753 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) Halar_0754 PWY-4381 fatty acid biosynthesis initiation I Halar_0754 PWY-5743 3-hydroxypropanoate cycle Halar_0754 PWY-5744 glyoxylate assimilation Halar_0754 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Halar_0754 PWY-6679 jadomycin biosynthesis Halar_0754 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Halar_0759 PWY-6167 flavin biosynthesis II (archaea) Halar_0759 PWY-6168 flavin biosynthesis III (fungi) Halar_0762 PWY-5025 indole-3-acetate biosynthesis IV (bacteria) Halar_0762 PWY-581 indole-3-acetate biosynthesis II Halar_0762 PWY-7308 acrylonitrile degradation I Halar_0789 PWY-6482 diphthamide biosynthesis (archaea) Halar_0789 PWY-7546 diphthamide biosynthesis (eukaryotes) Halar_0805 PWY-2161 folate polyglutamylation Halar_0805 PWY-6614 tetrahydrofolate biosynthesis Halar_0806 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Halar_0806 PWY-6123 inosine-5'-phosphate biosynthesis I Halar_0806 PWY-6124 inosine-5'-phosphate biosynthesis II Halar_0806 PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate Halar_0806 PWY-7234 inosine-5'-phosphate biosynthesis III Halar_0807 PWY-6123 inosine-5'-phosphate biosynthesis I Halar_0807 PWY-6124 inosine-5'-phosphate biosynthesis II Halar_0807 PWY-7219 adenosine ribonucleotides de novo biosynthesis Halar_0807 PWY-7234 inosine-5'-phosphate biosynthesis III Halar_0810 PWY-2941 L-lysine biosynthesis II Halar_0810 PWY-5097 L-lysine biosynthesis VI Halar_0811 PWY-2941 L-lysine biosynthesis II Halar_0811 PWY-2942 L-lysine biosynthesis III Halar_0811 PWY-5097 L-lysine biosynthesis VI Halar_0813 PWY-2941 L-lysine biosynthesis II Halar_0813 PWY-2942 L-lysine biosynthesis III Halar_0813 PWY-5097 L-lysine biosynthesis VI Halar_0814 PWY-2941 L-lysine biosynthesis II Halar_0814 PWY-2942 L-lysine biosynthesis III Halar_0814 PWY-5097 L-lysine biosynthesis VI Halar_0816 PWY-6711 archaeosine biosynthesis Halar_0823 PWY-6829 tRNA methylation (yeast) Halar_0823 PWY-7285 methylwyosine biosynthesis Halar_0823 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis Halar_0827 PWY-6482 diphthamide biosynthesis (archaea) Halar_0840 PWY-6672 cis-genanyl-CoA degradation Halar_0840 PWY-7118 chitin degradation to ethanol Halar_0842 PWY-5743 3-hydroxypropanoate cycle Halar_0842 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Halar_0842 PWY-6728 methylaspartate cycle Halar_0842 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Halar_0943 PWY-3841 folate transformations II Halar_0943 PWY-6614 tetrahydrofolate biosynthesis Halar_0953 PWY-5484 glycolysis II (from fructose 6-phosphate) Halar_0954 PWY-6823 molybdenum cofactor biosynthesis Halar_0954 PWY-6891 thiazole biosynthesis II (Bacillus) Halar_0954 PWY-6892 thiazole biosynthesis I (E. coli) Halar_0954 PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis Halar_0965 PWY-6823 molybdenum cofactor biosynthesis Halar_0965 PWY-6891 thiazole biosynthesis II (Bacillus) Halar_0965 PWY-6892 thiazole biosynthesis I (E. coli) Halar_0965 PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis Halar_0977 PWY-6160 3-dehydroquinate biosynthesis II (archaea) Halar_0985 PWY-4061 glutathione-mediated detoxification I Halar_0985 PWY-6842 glutathione-mediated detoxification II Halar_0985 PWY-7112 4-hydroxy-2-nonenal detoxification Halar_0985 PWY-7533 gliotoxin biosynthesis Halar_0986 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) Halar_0986 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) Halar_0986 PWY-6897 thiamin salvage II Halar_0986 PWY-6907 thiamin diphosphate biosynthesis III (Staphylococcus) Halar_0986 PWY-6908 thiamin diphosphate biosynthesis IV (eukaryotes) Halar_0986 PWY-7353 4-methyl-5(β-hydroxyethyl)thiazole salvage (yeast) Halar_0986 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) Halar_0987 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Halar_0998 PWY-5737 (5R)-carbapenem carboxylate biosynthesis Halar_0998 PWY-6922 L-Nδ-acetylornithine biosynthesis Halar_1038 PWY-6938 NADH repair Halar_1062 PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA Halar_1062 PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA Halar_1066 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) Halar_1066 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) Halar_1066 PWY-6897 thiamin salvage II Halar_1066 PWY-6907 thiamin diphosphate biosynthesis III (Staphylococcus) Halar_1066 PWY-6908 thiamin diphosphate biosynthesis IV (eukaryotes) Halar_1066 PWY-6910 hydroxymethylpyrimidine salvage Halar_1066 PWY-7353 4-methyl-5(β-hydroxyethyl)thiazole salvage (yeast) Halar_1066 PWY-7356 thiamin salvage IV (yeast) Halar_1066 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) Halar_1067 PWY-6899 base-degraded thiamin salvage Halar_1067 PWY-7356 thiamin salvage IV (yeast) Halar_1068 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Halar_1068 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Halar_1068 PWY-6268 adenosylcobalamin salvage from cobalamin Halar_1068 PWY-6269 adenosylcobalamin salvage from cobinamide II Halar_1072 PWY-7153 grixazone biosynthesis Halar_1083 PWY-7165 L-ascorbate biosynthesis VI (engineered pathway) Halar_1104 PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde Halar_1104 PWY-6309 L-tryptophan degradation XI (mammalian, via kynurenine) Halar_1117 PWY-7533 gliotoxin biosynthesis Halar_1118 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation Halar_1126 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Halar_1126 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Halar_1159 PWY-5663 tetrahydrobiopterin biosynthesis I Halar_1159 PWY-5664 tetrahydrobiopterin biosynthesis II Halar_1159 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Halar_1159 PWY-6703 preQ0 biosynthesis Halar_1159 PWY-6983 tetrahydrobiopterin biosynthesis III Halar_1159 PWY-7442 drosopterin and aurodrosopterin biosynthesis Halar_1172 PWY-6167 flavin biosynthesis II (archaea) Halar_1172 PWY-6168 flavin biosynthesis III (fungi) Halar_1179 PWY-1723 formaldehyde oxidation V (H4MPT pathway) Halar_1181 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation Halar_1184 PWY-6832 2-aminoethylphosphonate degradation II Halar_1199 PWY-4983 L-citrulline-nitric oxide cycle Halar_1199 PWY-4984 urea cycle Halar_1199 PWY-5 canavanine biosynthesis Halar_1199 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Halar_1199 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Halar_1200 PWY-4983 L-citrulline-nitric oxide cycle Halar_1200 PWY-4984 urea cycle Halar_1200 PWY-5 canavanine biosynthesis Halar_1200 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Halar_1200 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Halar_1203 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Halar_1203 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Halar_1204 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Halar_1204 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Halar_1207 PWY-4981 L-proline biosynthesis II (from arginine) Halar_1207 PWY-4984 urea cycle Halar_1207 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Halar_1209 PWY-6871 3-methylbutanol biosynthesis Halar_1265 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation Halar_1275 PWY-5350 thiosulfate disproportionation III (rhodanese) Halar_1294 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Halar_1294 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Halar_1294 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Halar_1295 PWY-5025 indole-3-acetate biosynthesis IV (bacteria) Halar_1295 PWY-581 indole-3-acetate biosynthesis II Halar_1295 PWY-7308 acrylonitrile degradation I Halar_1296 PWY-5025 indole-3-acetate biosynthesis IV (bacteria) Halar_1296 PWY-581 indole-3-acetate biosynthesis II Halar_1296 PWY-7308 acrylonitrile degradation I Halar_1316 PWY-5958 acridone alkaloid biosynthesis Halar_1316 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Halar_1316 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Halar_1317 PWY-5958 acridone alkaloid biosynthesis Halar_1317 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Halar_1317 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Halar_1319 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Halar_1341 PWY-3781 aerobic respiration I (cytochrome c) Halar_1341 PWY-4302 aerobic respiration III (alternative oxidase pathway) Halar_1341 PWY-5083 NAD/NADH phosphorylation and dephosphorylation Halar_1341 PWY-6692 Fe(II) oxidation Halar_1361 PWY-5686 UMP biosynthesis Halar_1372 PWY-5743 3-hydroxypropanoate cycle Halar_1372 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Halar_1372 PWY-6728 methylaspartate cycle Halar_1372 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Halar_1374 PWY-5743 3-hydroxypropanoate cycle Halar_1374 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Halar_1374 PWY-6728 methylaspartate cycle Halar_1374 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Halar_1378 PWY-6167 flavin biosynthesis II (archaea) Halar_1380 PWY-6829 tRNA methylation (yeast) Halar_1389 PWY-7391 isoprene biosynthesis II (engineered) Halar_1389 PWY-922 mevalonate pathway I Halar_1390 PWY-5083 NAD/NADH phosphorylation and dephosphorylation Halar_1390 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Halar_1390 PWY-7269 NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast) Halar_1416 PWY-6466 pyridoxal 5'-phosphate biosynthesis II Halar_1422 PWY-5101 L-isoleucine biosynthesis II Halar_1422 PWY-5103 L-isoleucine biosynthesis III Halar_1422 PWY-5104 L-isoleucine biosynthesis IV Halar_1422 PWY-7111 pyruvate fermentation to isobutanol (engineered) Halar_1423 PWY-5101 L-isoleucine biosynthesis II Halar_1423 PWY-5103 L-isoleucine biosynthesis III Halar_1423 PWY-5104 L-isoleucine biosynthesis IV Halar_1423 PWY-5938 (R)-acetoin biosynthesis I Halar_1423 PWY-5939 (R)-acetoin biosynthesis II Halar_1423 PWY-6389 (S)-acetoin biosynthesis Halar_1423 PWY-7111 pyruvate fermentation to isobutanol (engineered) Halar_1424 PWY-5101 L-isoleucine biosynthesis II Halar_1424 PWY-5103 L-isoleucine biosynthesis III Halar_1424 PWY-5104 L-isoleucine biosynthesis IV Halar_1424 PWY-5938 (R)-acetoin biosynthesis I Halar_1424 PWY-5939 (R)-acetoin biosynthesis II Halar_1424 PWY-6389 (S)-acetoin biosynthesis Halar_1424 PWY-7111 pyruvate fermentation to isobutanol (engineered) Halar_1425 PWY-6871 3-methylbutanol biosynthesis Halar_1426 PWY-5101 L-isoleucine biosynthesis II Halar_1426 PWY-5103 L-isoleucine biosynthesis III Halar_1426 PWY-5104 L-isoleucine biosynthesis IV Halar_1426 PWY-7111 pyruvate fermentation to isobutanol (engineered) Halar_1450 PWY-4261 glycerol degradation I Halar_1450 PWY-6118 glycerol-3-phosphate shuttle Halar_1450 PWY-6952 glycerophosphodiester degradation Halar_1451 PWY-6167 flavin biosynthesis II (archaea) Halar_1451 PWY-6168 flavin biosynthesis III (fungi) Halar_1459 PWY-181 photorespiration Halar_1480 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation Halar_1480 PWY-6596 adenosine nucleotides degradation I Halar_1480 PWY-7221 guanosine ribonucleotides de novo biosynthesis Halar_1486 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Halar_1486 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Halar_1486 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Halar_1491 PWY-6167 flavin biosynthesis II (archaea) Halar_1494 PWY-5381 pyridine nucleotide cycling (plants) Halar_1494 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation Halar_1494 PWY-6596 adenosine nucleotides degradation I Halar_1494 PWY-6606 guanosine nucleotides degradation II Halar_1494 PWY-6607 guanosine nucleotides degradation I Halar_1494 PWY-6608 guanosine nucleotides degradation III Halar_1494 PWY-7185 UTP and CTP dephosphorylation I Halar_1499 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation Halar_1501 PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) Halar_1501 PWY-5837 1,4-dihydroxy-2-naphthoate biosynthesis I Halar_1501 PWY-5901 2,3-dihydroxybenzoate biosynthesis Halar_1501 PWY-6406 salicylate biosynthesis I Halar_1502 PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) Halar_1502 PWY-5837 1,4-dihydroxy-2-naphthoate biosynthesis I Halar_1503 PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) Halar_1503 PWY-5837 1,4-dihydroxy-2-naphthoate biosynthesis I Halar_1505 PWY-5839 menaquinol-7 biosynthesis Halar_1505 PWY-5851 demethylmenaquinol-9 biosynthesis Halar_1505 PWY-5852 demethylmenaquinol-8 biosynthesis I Halar_1505 PWY-5853 demethylmenaquinol-6 biosynthesis I Halar_1505 PWY-5890 menaquinol-10 biosynthesis Halar_1505 PWY-5891 menaquinol-11 biosynthesis Halar_1505 PWY-5892 menaquinol-12 biosynthesis Halar_1505 PWY-5895 menaquinol-13 biosynthesis Halar_1506 PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) Halar_1506 PWY-5837 1,4-dihydroxy-2-naphthoate biosynthesis I Halar_1509 PWY-5344 L-homocysteine biosynthesis Halar_1509 PWY-7174 S-methyl-5-thio-α-D-ribose 1-phosphate degradation II Halar_1510 PWY-5344 L-homocysteine biosynthesis Halar_1518 PWY-5531 chlorophyllide a biosynthesis II (anaerobic) Halar_1518 PWY-7159 chlorophyllide a biosynthesis III (aerobic, light independent) Halar_1529 PWY-6748 nitrate reduction VII (denitrification) Halar_1529 PWY-7084 nitrifier denitrification Halar_1536 PWY-3781 aerobic respiration I (cytochrome c) Halar_1536 PWY-4521 arsenite oxidation I (respiratory) Halar_1536 PWY-6692 Fe(II) oxidation Halar_1536 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Halar_1545 PWY-7199 pyrimidine deoxyribonucleosides salvage Halar_1546 PWY-6174 mevalonate pathway II (archaea) Halar_1546 PWY-7524 mevalonate pathway III (archaea) Halar_1547 PWY-3821 galactose degradation III Halar_1547 PWY-6174 mevalonate pathway II (archaea) Halar_1547 PWY-6317 galactose degradation I (Leloir pathway) Halar_1547 PWY-6527 stachyose degradation Halar_1547 PWY-7391 isoprene biosynthesis II (engineered) Halar_1547 PWY-922 mevalonate pathway I Halar_1549 PWY-1042 glycolysis IV (plant cytosol) Halar_1549 PWY-1622 formaldehyde assimilation I (serine pathway) Halar_1549 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Halar_1549 PWY-5484 glycolysis II (from fructose 6-phosphate) Halar_1549 PWY-5723 Rubisco shunt Halar_1549 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Halar_1549 PWY-6886 1-butanol autotrophic biosynthesis Halar_1549 PWY-6901 superpathway of glucose and xylose degradation Halar_1549 PWY-7003 glycerol degradation to butanol Halar_1549 PWY-7124 ethylene biosynthesis V (engineered) Halar_1549 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Halar_1561 PWY-6823 molybdenum cofactor biosynthesis Halar_1568 PWY-7193 pyrimidine ribonucleosides salvage I Halar_1583 PWY-6556 pyrimidine ribonucleosides salvage II Halar_1583 PWY-7181 pyrimidine deoxyribonucleosides degradation Halar_1583 PWY-7193 pyrimidine ribonucleosides salvage I Halar_1583 PWY-7199 pyrimidine deoxyribonucleosides salvage Halar_1612 PWY-6749 CMP-legionaminate biosynthesis I Halar_1613 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Halar_1624 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Halar_1624 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Halar_1625 PWY-6832 2-aminoethylphosphonate degradation II Halar_1631 PWY-6703 preQ0 biosynthesis Halar_1632 PWY-6703 preQ0 biosynthesis Halar_1640 PWY-6854 ethylene biosynthesis III (microbes) Halar_1642 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Halar_1646 PWY-1881 formate oxidation to CO2 Halar_1646 PWY-5497 purine nucleobases degradation II (anaerobic) Halar_1646 PWY-6696 oxalate degradation III Halar_1648 PWY-5964 guanylyl molybdenum cofactor biosynthesis Halar_1663 PWY-3781 aerobic respiration I (cytochrome c) Halar_1663 PWY-4521 arsenite oxidation I (respiratory) Halar_1663 PWY-6692 Fe(II) oxidation Halar_1663 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Halar_1673 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation Halar_1703 PWY-7425 2-chloroacrylate degradation I Halar_1720 PWY-1722 formate reduction to 5,10-methylenetetrahydrofolate Halar_1720 PWY-2201 folate transformations I Halar_1720 PWY-3841 folate transformations II Halar_1720 PWY-5030 L-histidine degradation III Halar_1720 PWY-5497 purine nucleobases degradation II (anaerobic) Halar_1720 PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate Halar_1721 PWY-1622 formaldehyde assimilation I (serine pathway) Halar_1721 PWY-181 photorespiration Halar_1721 PWY-2161 folate polyglutamylation Halar_1721 PWY-2201 folate transformations I Halar_1721 PWY-3661 glycine betaine degradation I Halar_1721 PWY-3661-1 glycine betaine degradation II (mammalian) Halar_1721 PWY-3841 folate transformations II Halar_1721 PWY-5497 purine nucleobases degradation II (anaerobic) Halar_1749 PWY-6167 flavin biosynthesis II (archaea) Halar_1751 PWY-1361 benzoyl-CoA degradation I (aerobic) Halar_1751 PWY-5109 2-methylbutanoate biosynthesis Halar_1751 PWY-5136 fatty acid β-oxidation II (peroxisome) Halar_1751 PWY-5138 unsaturated, even numbered fatty acid β-oxidation Halar_1751 PWY-5177 glutaryl-CoA degradation Halar_1751 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Halar_1751 PWY-6435 4-hydroxybenzoate biosynthesis V Halar_1751 PWY-6583 pyruvate fermentation to butanol I Halar_1751 PWY-6863 pyruvate fermentation to hexanol Halar_1751 PWY-6883 pyruvate fermentation to butanol II Halar_1751 PWY-6944 androstenedione degradation Halar_1751 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) Halar_1751 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) Halar_1751 PWY-7007 methyl ketone biosynthesis Halar_1751 PWY-7046 4-coumarate degradation (anaerobic) Halar_1751 PWY-7094 fatty acid salvage Halar_1751 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis Halar_1751 PWY-735 jasmonic acid biosynthesis Halar_1751 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) Halar_1766 PWY-5796 malonate decarboxylase activation Halar_1768 PWY-5198 factor 420 biosynthesis Halar_1771 PWY-5199 factor 420 polyglutamylation Halar_1777 PWY-7204 pyridoxal 5'-phosphate salvage II (plants) Halar_1777 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) Halar_1782 PWY-5663 tetrahydrobiopterin biosynthesis I Halar_1782 PWY-5664 tetrahydrobiopterin biosynthesis II Halar_1782 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Halar_1782 PWY-6703 preQ0 biosynthesis Halar_1782 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea) Halar_1782 PWY-6983 tetrahydrobiopterin biosynthesis III Halar_1782 PWY-7442 drosopterin and aurodrosopterin biosynthesis Halar_1798 PWY-6902 chitin degradation II Halar_1807 PWY-2941 L-lysine biosynthesis II Halar_1807 PWY-2942 L-lysine biosynthesis III Halar_1807 PWY-5097 L-lysine biosynthesis VI Halar_1807 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Halar_1807 PWY-6559 spermidine biosynthesis II Halar_1807 PWY-6562 norspermidine biosynthesis Halar_1807 PWY-7153 grixazone biosynthesis Halar_1807 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Halar_1813 PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation Halar_1813 PWY-7174 S-methyl-5-thio-α-D-ribose 1-phosphate degradation II Halar_1823 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Halar_1823 PWY-5686 UMP biosynthesis Halar_1823 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Halar_1825 PWY-5083 NAD/NADH phosphorylation and dephosphorylation Halar_1825 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Halar_1825 PWY-7269 NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast) Halar_1842 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Halar_1842 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Halar_1842 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Halar_1842 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) Halar_1881 PWY-5531 chlorophyllide a biosynthesis II (anaerobic) Halar_1881 PWY-7159 chlorophyllide a biosynthesis III (aerobic, light independent) Halar_1882 PWY-5531 chlorophyllide a biosynthesis II (anaerobic) Halar_1882 PWY-7159 chlorophyllide a biosynthesis III (aerobic, light independent) Halar_1884 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) Halar_1884 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) Halar_1885 PWY-4381 fatty acid biosynthesis initiation I Halar_1885 PWY-5743 3-hydroxypropanoate cycle Halar_1885 PWY-5744 glyoxylate assimilation Halar_1885 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Halar_1885 PWY-6679 jadomycin biosynthesis Halar_1885 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Halar_1917 PWY-5350 thiosulfate disproportionation III (rhodanese) Halar_1922 PWY-5381 pyridine nucleotide cycling (plants) Halar_1930 PWY-5686 UMP biosynthesis Halar_1933 PWY-3781 aerobic respiration I (cytochrome c) Halar_1933 PWY-4302 aerobic respiration III (alternative oxidase pathway) Halar_1933 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Halar_1933 PWY-5690 TCA cycle II (plants and fungi) Halar_1933 PWY-6728 methylaspartate cycle Halar_1933 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Halar_1933 PWY-7254 TCA cycle VII (acetate-producers) Halar_1933 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Halar_1948 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Halar_1948 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Halar_1948 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Halar_1948 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation Halar_1948 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Halar_1948 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Halar_1989 PWY-6148 tetrahydromethanopterin biosynthesis Halar_1992 PWY-6700 queuosine biosynthesis Halar_1992 PWY-6711 archaeosine biosynthesis Halar_1993 PWY-6700 queuosine biosynthesis Halar_1993 PWY-6711 archaeosine biosynthesis Halar_2017 PWY-4041 γ-glutamyl cycle Halar_2017 PWY-5826 hypoglycin biosynthesis Halar_2078 PWY-5663 tetrahydrobiopterin biosynthesis I Halar_2078 PWY-5664 tetrahydrobiopterin biosynthesis II Halar_2078 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Halar_2078 PWY-6703 preQ0 biosynthesis Halar_2078 PWY-6983 tetrahydrobiopterin biosynthesis III Halar_2078 PWY-7442 drosopterin and aurodrosopterin biosynthesis Halar_2088 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Halar_2088 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Halar_2088 PWY-6268 adenosylcobalamin salvage from cobalamin Halar_2088 PWY-6269 adenosylcobalamin salvage from cobinamide II Halar_2103 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Halar_2124 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Halar_2124 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Halar_2124 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Halar_2124 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Halar_2124 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Halar_2124 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Halar_2124 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Halar_2124 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Halar_2128 PWY-5958 acridone alkaloid biosynthesis Halar_2128 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Halar_2128 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Halar_2129 PWY-5958 acridone alkaloid biosynthesis Halar_2129 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Halar_2129 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Halar_2143 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Halar_2143 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Halar_2165 PWY-5041 S-adenosyl-L-methionine cycle II Halar_2165 PWY-6151 S-adenosyl-L-methionine cycle I Halar_2165 PWY-6936 seleno-amino acid biosynthesis Halar_2165 PWY-702 L-methionine biosynthesis II Halar_2166 PWY-5041 S-adenosyl-L-methionine cycle II Halar_2166 PWY-6151 S-adenosyl-L-methionine cycle I Halar_2166 PWY-6936 seleno-amino acid biosynthesis Halar_2166 PWY-702 L-methionine biosynthesis II Halar_2167 PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation Halar_2167 PWY-5532 adenosine nucleotides degradation IV Halar_2167 PWY-7174 S-methyl-5-thio-α-D-ribose 1-phosphate degradation II Halar_2170 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Halar_2170 PWY-7176 UTP and CTP de novo biosynthesis Halar_2170 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Halar_2170 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Halar_2170 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation Halar_2170 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Halar_2170 PWY-7205 CMP phosphorylation Halar_2170 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Halar_2170 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Halar_2170 PWY-7221 guanosine ribonucleotides de novo biosynthesis Halar_2170 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Halar_2170 PWY-7224 purine deoxyribonucleosides salvage Halar_2170 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Halar_2170 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Halar_2178 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation Halar_2204 PWY-6749 CMP-legionaminate biosynthesis I Halar_2221 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation Halar_2225 PWY-5198 factor 420 biosynthesis Halar_2226 PWY-5198 factor 420 biosynthesis Halar_2232 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Halar_2232 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Halar_2233 PWY-6123 inosine-5'-phosphate biosynthesis I Halar_2233 PWY-6124 inosine-5'-phosphate biosynthesis II Halar_2233 PWY-7234 inosine-5'-phosphate biosynthesis III Halar_2234 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Halar_2234 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Halar_2234 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Halar_2235 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Halar_2235 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Halar_2235 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Halar_2248 PWY-7221 guanosine ribonucleotides de novo biosynthesis Halar_2249 PWY-7176 UTP and CTP de novo biosynthesis Halar_2249 PWY-7177 UTP and CTP dephosphorylation II Halar_2249 PWY-7185 UTP and CTP dephosphorylation I Halar_2257 PWY-4202 arsenate detoxification I (glutaredoxin) Halar_2257 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation Halar_2257 PWY-6608 guanosine nucleotides degradation III Halar_2257 PWY-6609 adenine and adenosine salvage III Halar_2257 PWY-6611 adenine and adenosine salvage V Halar_2257 PWY-6620 guanine and guanosine salvage Halar_2257 PWY-6627 salinosporamide A biosynthesis Halar_2257 PWY-6644 fluoroacetate and fluorothreonine biosynthesis Halar_2257 PWY-7179 purine deoxyribonucleosides degradation I Halar_2257 PWY-7179-1 purine deoxyribonucleosides degradation Halar_2260 PWY-7180 2'-deoxy-α-D-ribose 1-phosphate degradation Halar_2281 PWY-5481 pyruvate fermentation to lactate Halar_2281 PWY-6901 superpathway of glucose and xylose degradation Halar_2331 PWY-6749 CMP-legionaminate biosynthesis I Halar_2341 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Halar_2358 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation Halar_2375 PWY-1341 phenylacetate degradation II (anaerobic) Halar_2375 PWY-6318 L-phenylalanine degradation IV (mammalian, via side chain) Halar_2495 PWY-6840 homoglutathione biosynthesis Halar_2495 PWY-7255 ergothioneine biosynthesis I (bacteria) Halar_2504 PWY-5041 S-adenosyl-L-methionine cycle II Halar_2504 PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis Halar_2515 PWY-7219 adenosine ribonucleotides de novo biosynthesis Halar_2529 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Halar_2530 PWY-3461 L-tyrosine biosynthesis II Halar_2530 PWY-3462 L-phenylalanine biosynthesis II Halar_2530 PWY-6120 L-tyrosine biosynthesis III Halar_2530 PWY-6627 salinosporamide A biosynthesis Halar_2543 PWY-7335 UDP-N-acetyl-α-D-mannosaminouronate biosynthesis Halar_2551 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Halar_2551 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Halar_2562 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type Halar_2562 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Halar_2562 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Halar_2562 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type Halar_2592 PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde Halar_2592 PWY-6309 L-tryptophan degradation XI (mammalian, via kynurenine) Halar_2598 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Halar_2598 PWY-6148 tetrahydromethanopterin biosynthesis Halar_2598 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea) Halar_2598 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) Halar_2608 PWY-5392 reductive TCA cycle II Halar_2608 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Halar_2608 PWY-5690 TCA cycle II (plants and fungi) Halar_2608 PWY-5913 TCA cycle VI (obligate autotrophs) Halar_2608 PWY-6728 methylaspartate cycle Halar_2608 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Halar_2608 PWY-7254 TCA cycle VII (acetate-producers) Halar_2608 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Halar_2618 PWY-6902 chitin degradation II Halar_2625 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Halar_2625 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Halar_2639 PWY-4202 arsenate detoxification I (glutaredoxin) Halar_2639 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation Halar_2639 PWY-6608 guanosine nucleotides degradation III Halar_2639 PWY-6609 adenine and adenosine salvage III Halar_2639 PWY-6611 adenine and adenosine salvage V Halar_2639 PWY-6620 guanine and guanosine salvage Halar_2639 PWY-6627 salinosporamide A biosynthesis Halar_2639 PWY-6644 fluoroacetate and fluorothreonine biosynthesis Halar_2639 PWY-7179 purine deoxyribonucleosides degradation I Halar_2639 PWY-7179-1 purine deoxyribonucleosides degradation Halar_2641 PWY-31 canavanine degradation Halar_2641 PWY-4984 urea cycle Halar_2641 PWY-6305 putrescine biosynthesis IV Halar_2641 PWY-6922 L-Nδ-acetylornithine biosynthesis Halar_2642 PWY-6167 flavin biosynthesis II (archaea) Halar_2682 PWY-40 putrescine biosynthesis I Halar_2682 PWY-43 putrescine biosynthesis II Halar_2682 PWY-6305 putrescine biosynthesis IV Halar_2682 PWY-6834 spermidine biosynthesis III Halar_2694 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) Halar_2694 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) Halar_2694 PWY-6896 thiamin salvage I Halar_2694 PWY-6897 thiamin salvage II Halar_2697 PWY-6823 molybdenum cofactor biosynthesis Halar_2699 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Halar_2720 PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation Halar_2744 PWY-6281 L-selenocysteine biosynthesis II (archaea and eukaryotes) Halar_2747 PWY-4261 glycerol degradation I Halar_2775 PWY-3801 sucrose degradation II (sucrose synthase) Halar_2775 PWY-5054 sorbitol biosynthesis I Halar_2775 PWY-5384 sucrose degradation IV (sucrose phosphorylase) Halar_2775 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Halar_2775 PWY-5659 GDP-mannose biosynthesis Halar_2775 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Halar_2775 PWY-621 sucrose degradation III (sucrose invertase) Halar_2775 PWY-622 starch biosynthesis Halar_2775 PWY-6531 mannitol cycle Halar_2775 PWY-6981 chitin biosynthesis Halar_2775 PWY-7238 sucrose biosynthesis II Halar_2775 PWY-7347 sucrose biosynthesis III Halar_2775 PWY-7385 1,3-propanediol biosynthesis (engineered) Halar_2794 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Halar_2794 PWY-5686 UMP biosynthesis Halar_2794 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Halar_2796 PWY-5123 trans, trans-farnesyl diphosphate biosynthesis Halar_2796 PWY-6174 mevalonate pathway II (archaea) Halar_2796 PWY-6383 mono-trans, poly-cis decaprenyl phosphate biosynthesis Halar_2796 PWY-6859 all-trans-farnesol biosynthesis Halar_2796 PWY-7102 bisabolene biosynthesis Halar_2796 PWY-7391 isoprene biosynthesis II (engineered) Halar_2796 PWY-7524 mevalonate pathway III (archaea) Halar_2796 PWY-7560 methylerythritol phosphate pathway II Halar_2796 PWY-922 mevalonate pathway I Halar_2811 PWY-7205 CMP phosphorylation Halar_2813 PWY-6823 molybdenum cofactor biosynthesis Halar_2814 PWY-6823 molybdenum cofactor biosynthesis Halar_2818 PWY-7158 L-phenylalanine degradation V Halar_2819 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Halar_2824 PWY-5686 UMP biosynthesis Halar_2830 PWY-702 L-methionine biosynthesis II Halar_2832 PWY-5686 UMP biosynthesis Halar_2836 PWY-6174 mevalonate pathway II (archaea) Halar_2836 PWY-7391 isoprene biosynthesis II (engineered) Halar_2836 PWY-7524 mevalonate pathway III (archaea) Halar_2836 PWY-922 mevalonate pathway I Halar_2843 PWY-6689 tRNA splicing Halar_2848 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) Halar_2848 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) Halar_2848 PWY-7382 lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast) Halar_2852 PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA Halar_2852 PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA Halar_2854 PWY-6749 CMP-legionaminate biosynthesis I Halar_2887 PWY-6167 flavin biosynthesis II (archaea) Halar_2888 PWY-6167 flavin biosynthesis II (archaea) Halar_2888 PWY-6168 flavin biosynthesis III (fungi) Halar_2889 PWY-5057 L-valine degradation II Halar_2889 PWY-5076 L-leucine degradation III Halar_2889 PWY-5078 L-isoleucine degradation II Halar_2889 PWY-5101 L-isoleucine biosynthesis II Halar_2889 PWY-5103 L-isoleucine biosynthesis III Halar_2889 PWY-5104 L-isoleucine biosynthesis IV Halar_2889 PWY-5108 L-isoleucine biosynthesis V Halar_2905 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) Halar_2905 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) Halar_2924 PWY-5686 UMP biosynthesis Halar_2957 PWY-7183 pyrimidine nucleobases salvage I Halar_2969 PWY-5669 phosphatidylethanolamine biosynthesis I Halar_2995 PWY-5041 S-adenosyl-L-methionine cycle II Halar_3004 PWY-6749 CMP-legionaminate biosynthesis I Halar_3009 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Halar_3009 PWY-5723 Rubisco shunt Halar_3031 PWY-7219 adenosine ribonucleotides de novo biosynthesis Halar_3032 PWY-7219 adenosine ribonucleotides de novo biosynthesis Halar_3033 PWY-6938 NADH repair Halar_3035 PWY-6167 flavin biosynthesis II (archaea) Halar_3074 PWY-5686 UMP biosynthesis Halar_3079 PWY-7221 guanosine ribonucleotides de novo biosynthesis Halar_3112 PWY-1042 glycolysis IV (plant cytosol) Halar_3112 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Halar_3112 PWY-5484 glycolysis II (from fructose 6-phosphate) Halar_3112 PWY-5723 Rubisco shunt Halar_3112 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Halar_3112 PWY-6886 1-butanol autotrophic biosynthesis Halar_3112 PWY-6901 superpathway of glucose and xylose degradation Halar_3112 PWY-7003 glycerol degradation to butanol Halar_3112 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Halar_3112 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Halar_3123 PWY-4981 L-proline biosynthesis II (from arginine) Halar_3147 PWY-7533 gliotoxin biosynthesis Halar_3159 PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) Halar_3168 PWY-6160 3-dehydroquinate biosynthesis II (archaea) Halar_3184 PWY-381 nitrate reduction II (assimilatory) Halar_3184 PWY-5675 nitrate reduction V (assimilatory) Halar_3184 PWY-6549 L-glutamine biosynthesis III Halar_3184 PWY-6963 ammonia assimilation cycle I Halar_3184 PWY-6964 ammonia assimilation cycle II Halar_3190 PWY-6829 tRNA methylation (yeast) Halar_3219 PWY-6167 flavin biosynthesis II (archaea) Halar_3226 PWY-6349 CDP-archaeol biosynthesis Halar_3247 PWY-7204 pyridoxal 5'-phosphate salvage II (plants) Halar_3247 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) Halar_3267 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Halar_3267 PWY-6416 quinate degradation II Halar_3267 PWY-6707 gallate biosynthesis Halar_3287 PWY-6123 inosine-5'-phosphate biosynthesis I Halar_3287 PWY-6124 inosine-5'-phosphate biosynthesis II Halar_3287 PWY-7234 inosine-5'-phosphate biosynthesis III Halar_3289 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Halar_3289 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Halar_3289 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Halar_3289 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Halar_3289 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Halar_3289 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Halar_3289 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Halar_3289 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Halar_3290 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Halar_3290 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Halar_3290 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Halar_3290 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Halar_3290 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Halar_3290 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Halar_3290 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Halar_3290 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Halar_3292 PWY-2941 L-lysine biosynthesis II Halar_3292 PWY-2942 L-lysine biosynthesis III Halar_3292 PWY-5097 L-lysine biosynthesis VI Halar_3292 PWY-6559 spermidine biosynthesis II Halar_3292 PWY-6562 norspermidine biosynthesis Halar_3292 PWY-7153 grixazone biosynthesis Halar_3308 PWY-6466 pyridoxal 5'-phosphate biosynthesis II Halar_3316 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Halar_3320 PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde Halar_3320 PWY-6309 L-tryptophan degradation XI (mammalian, via kynurenine) Halar_3351 PWY-7533 gliotoxin biosynthesis Halar_3369 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Halar_3369 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Halar_3370 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Halar_3371 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Halar_3371 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Halar_3372 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Halar_3372 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Halar_3400 PWY-5392 reductive TCA cycle II Halar_3400 PWY-5537 pyruvate fermentation to acetate V Halar_3400 PWY-5538 pyruvate fermentation to acetate VI Halar_3400 PWY-5690 TCA cycle II (plants and fungi) Halar_3400 PWY-5913 TCA cycle VI (obligate autotrophs) Halar_3400 PWY-6728 methylaspartate cycle Halar_3400 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Halar_3400 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Halar_3401 PWY-5392 reductive TCA cycle II Halar_3401 PWY-5537 pyruvate fermentation to acetate V Halar_3401 PWY-5538 pyruvate fermentation to acetate VI Halar_3401 PWY-5690 TCA cycle II (plants and fungi) Halar_3401 PWY-5913 TCA cycle VI (obligate autotrophs) Halar_3401 PWY-6728 methylaspartate cycle Halar_3401 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Halar_3401 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Halar_3419 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Halar_3419 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Halar_3419 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Halar_3441 PWY-5392 reductive TCA cycle II Halar_3441 PWY-5537 pyruvate fermentation to acetate V Halar_3441 PWY-5538 pyruvate fermentation to acetate VI Halar_3441 PWY-5690 TCA cycle II (plants and fungi) Halar_3441 PWY-5913 TCA cycle VI (obligate autotrophs) Halar_3441 PWY-6728 methylaspartate cycle Halar_3441 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Halar_3441 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Halar_3482 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Halar_3482 PWY-6148 tetrahydromethanopterin biosynthesis Halar_3482 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea) Halar_3482 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) Halar_3484 PWY-6167 flavin biosynthesis II (archaea) Halar_3506 PWY-5530 sorbitol biosynthesis II Halar_3514 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Halar_3514 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Halar_3514 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Halar_3521 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Halar_3523 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Halar_3533 PWY-1042 glycolysis IV (plant cytosol) Halar_3533 PWY-5484 glycolysis II (from fructose 6-phosphate) Halar_3533 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Halar_3533 PWY-7003 glycerol degradation to butanol Halar_3536 PWY-7219 adenosine ribonucleotides de novo biosynthesis Halar_3542 PWY-5041 S-adenosyl-L-methionine cycle II Halar_3542 PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis Halar_3550 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Halar_3550 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Halar_3550 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Halar_3554 PWY-1361 benzoyl-CoA degradation I (aerobic) Halar_3554 PWY-5109 2-methylbutanoate biosynthesis Halar_3554 PWY-5136 fatty acid β-oxidation II (peroxisome) Halar_3554 PWY-5138 unsaturated, even numbered fatty acid β-oxidation Halar_3554 PWY-5177 glutaryl-CoA degradation Halar_3554 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Halar_3554 PWY-6435 4-hydroxybenzoate biosynthesis V Halar_3554 PWY-6583 pyruvate fermentation to butanol I Halar_3554 PWY-6863 pyruvate fermentation to hexanol Halar_3554 PWY-6883 pyruvate fermentation to butanol II Halar_3554 PWY-6944 androstenedione degradation Halar_3554 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) Halar_3554 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) Halar_3554 PWY-7007 methyl ketone biosynthesis Halar_3554 PWY-7046 4-coumarate degradation (anaerobic) Halar_3554 PWY-7094 fatty acid salvage Halar_3554 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis Halar_3554 PWY-735 jasmonic acid biosynthesis Halar_3554 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) Halar_3622 PWY-6349 CDP-archaeol biosynthesis Halar_3639 PWY-5083 NAD/NADH phosphorylation and dephosphorylation Halar_3639 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Halar_3639 PWY-7269 NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast) Halar_3659 PWY-7219 adenosine ribonucleotides de novo biosynthesis Halar_3670 PWY-1042 glycolysis IV (plant cytosol) Halar_3670 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Halar_3670 PWY-5484 glycolysis II (from fructose 6-phosphate) Halar_3670 PWY-5723 Rubisco shunt Halar_3670 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Halar_3670 PWY-6886 1-butanol autotrophic biosynthesis Halar_3670 PWY-6901 superpathway of glucose and xylose degradation Halar_3670 PWY-7003 glycerol degradation to butanol Halar_3670 PWY-7124 ethylene biosynthesis V (engineered) Halar_3670 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Halar_3691 PWY-6167 flavin biosynthesis II (archaea) Halar_3691 PWY-6168 flavin biosynthesis III (fungi) Halar_3691 PWY-7219 adenosine ribonucleotides de novo biosynthesis Halar_3697 PWY-1042 glycolysis IV (plant cytosol) Halar_3697 PWY-5484 glycolysis II (from fructose 6-phosphate) Halar_3697 PWY-6886 1-butanol autotrophic biosynthesis Halar_3697 PWY-6901 superpathway of glucose and xylose degradation Halar_3697 PWY-7003 glycerol degradation to butanol Halar_3704 PWY-5532 adenosine nucleotides degradation IV Halar_3708 PWY-6174 mevalonate pathway II (archaea) Halar_3708 PWY-7391 isoprene biosynthesis II (engineered) Halar_3708 PWY-7524 mevalonate pathway III (archaea) Halar_3708 PWY-922 mevalonate pathway I Halar_3720 PWY-2941 L-lysine biosynthesis II Halar_3720 PWY-2942 L-lysine biosynthesis III Halar_3720 PWY-5097 L-lysine biosynthesis VI