Header columns: Raw intensity (tr.mean) {A} Raw intensity (tr.mean) {B} Background (tr.mean) {A} Background (tr.mean) {B} Net intensity (tr.mean) {A} Net intensity (tr.mean) {B} Position Row Column Grid Description The raw ArrayPro should look like this: Raw intensity (tr.mean) {A} Raw intensity (tr.mean) {B} Background (tr.mean) {A} Background (tr.mean) {B} Net intensity (tr.mean) {A} Net intensity (tr.mean) {B} Position Row Column Grid Description 1 1510.134615 2584.048077 433.375000 1519.489130 1076.759615 1064.558946 1-1:1 1 1 1 llmg_0427-llmg_0427-mg5554 2 1427.625000 2199.201923 420.201087 1436.097826 1007.423913 763.104097 1-1:2 1 2 1 empty 3 2430.413462 2945.134615 436.255435 1535.565217 1994.158027 1409.569398 1-1:3 1 3 1 llmg_1450-apbE-mg5696 4 588.586538 1558.865385 436.538043 1531.000000 152.048495 27.865385 1-1:4 1 4 1 llmg_0806-ps316-MG2817 5 864.500000 1998.855769 434.070652 1483.717391 430.429348 515.138378 1-1:5 1 5 1 llmg_0879-speG-MG2697 6 1294.490385 2210.201923 461.320652 1448.211957 833.169732 761.989967 1-1:6 1 6 1 llmg_1629-llmg_1629-MG2622 7 520.403846 1608.048077 417.918478 1406.907609 102.485368 201.140468 1-1:7 1 7 1 llmg_pseudo60-comEC-MG2223 8 470.007042 1495.521127 435.369565 1452.141304 34.637477 43.379822 1-1:8 1 8 1 llmg_0917-llmg_0917-MG1107 9 582.865385 1518.173077 419.413043 1508.798913 163.452341 9.374164 1-1:9 1 9 1 llmg_2083-ps460-MG1025 10 610.278846 1500.875000 462.298913 1439.961957 147.979933 60.913043 1-1:10 1 10 1 empty 11 1064.846154 1841.807692 490.277174 1512.505435 574.568980 329.302258 1-1:11 1 11 1 llmg_2227-llmg_2227-MG135 12 8740.009615 8389.836538 497.983696 1468.880435 8242.025920 6920.956104 1-1:12 1 12 1 llmg_1508-pyrC-MG15 .. .. .. .. .. tailing rows like "mean" "maximum" etc.. will be removed automatically