locus-tag	class	description
CVPH_RS00005	PF08299	Bacterial dnaA protein helix-turn-helix
CVPH_RS00005	PF00308	Bacterial dnaA  protein
CVPH_RS00005	PF11638	DnaA N-terminal domain
CVPH_RS00010	PF02767	DNA polymerase III beta subunit, central domain
CVPH_RS00010	PF00712	DNA polymerase III beta subunit, N-terminal domain
CVPH_RS00010	PF02768	DNA polymerase III beta subunit, C-terminal domain
CVPH_RS00015	PF02463	RecF/RecN/SMC N terminal domain
CVPH_RS00020	PF00986	DNA gyrase B subunit, carboxyl terminus
CVPH_RS00020	PF18053	DNA gyrase B subunit insert domain
CVPH_RS00020	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CVPH_RS00020	PF01751	Toprim domain
CVPH_RS00020	PF00204	DNA gyrase B
CVPH_RS00025	PF00485	Phosphoribulokinase / Uridine kinase family
CVPH_RS00040	PF00133	tRNA synthetases class I (I, L, M and V)
CVPH_RS00040	PF08264	Anticodon-binding domain of tRNA
CVPH_RS00040	PF13603	Leucyl-tRNA synthetase, Domain 2
CVPH_RS00045	PF01180	Dihydroorotate dehydrogenase
CVPH_RS00060	PF02798	Glutathione S-transferase, N-terminal domain
CVPH_RS00060	PF00043	Glutathione S-transferase, C-terminal domain
CVPH_RS00065	PF02167	Cytochrome C1 family
CVPH_RS00070	PF00032	Cytochrome b(C-terminal)/b6/petD
CVPH_RS00070	PF00033	Cytochrome b/b6/petB
CVPH_RS00075	PF00355	Rieske [2Fe-2S] domain
CVPH_RS00075	PF10399	Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal
CVPH_RS00085	PF01043	SecA preprotein cross-linking domain
CVPH_RS00085	PF07517	SecA DEAD-like domain
CVPH_RS00085	PF07516	SecA Wing and Scaffold domain
CVPH_RS00085	PF02810	SEC-C motif
CVPH_RS00090	PF03702	Anhydro-N-acetylmuramic acid kinase
CVPH_RS00095	PF01979	Amidohydrolase family
CVPH_RS00105	PF01687	Riboflavin kinase
CVPH_RS00105	PF06574	FAD synthetase
CVPH_RS00110	PF14815	NUDIX domain
CVPH_RS00110	PF00730	HhH-GPD superfamily base excision DNA repair protein
CVPH_RS00115	PF04204	Homoserine O-succinyltransferase 
CVPH_RS00125	PF00155	Aminotransferase class I and II
CVPH_RS00130	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
CVPH_RS00140	PF01259	SAICAR synthetase
CVPH_RS00155	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
CVPH_RS00155	PF13288	DXP reductoisomerase C-terminal domain
CVPH_RS00155	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
CVPH_RS00165	PF01255	Putative undecaprenyl diphosphate synthase
CVPH_RS00170	PF00977	Histidine biosynthesis protein
CVPH_RS00180	PF01040	UbiA prenyltransferase family
CVPH_RS00190	PF02630	SCO1/SenC
CVPH_RS00205	PF02790	Cytochrome C oxidase subunit II, transmembrane domain
CVPH_RS00205	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
CVPH_RS00210	PF00115	Cytochrome C and Quinol oxidase polypeptide I
CVPH_RS00215	PF04442	Cytochrome c oxidase assembly protein CtaG/Cox11
CVPH_RS00220	PF00510	Cytochrome c oxidase subunit III
CVPH_RS00235	PF00115	Cytochrome C and Quinol oxidase polypeptide I
CVPH_RS00250	PF14715	N-terminal domain of cytochrome oxidase-cbb3, FixP 
CVPH_RS00250	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
CVPH_RS00335	PF00361	Proton-conducting membrane transporter
CVPH_RS00340	PF00361	Proton-conducting membrane transporter
CVPH_RS00340	PF01059	NADH-ubiquinone oxidoreductase chain 4, amino terminus
CVPH_RS00345	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
CVPH_RS00345	PF00361	Proton-conducting membrane transporter
CVPH_RS00355	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
CVPH_RS00360	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
CVPH_RS00365	PF12838	4Fe-4S dicluster domain
CVPH_RS00370	PF00146	NADH dehydrogenase
CVPH_RS00375	PF00384	Molybdopterin oxidoreductase
CVPH_RS00375	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CVPH_RS00375	PF09326	NADH-ubiquinone oxidoreductase subunit G, C-terminal
CVPH_RS00380	PF10531	SLBB domain
CVPH_RS00380	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
CVPH_RS00380	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
CVPH_RS00390	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
CVPH_RS00395	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
CVPH_RS00400	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
CVPH_RS00405	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
CVPH_RS00410	PF01523	Putative modulator of DNA gyrase
CVPH_RS00420	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
CVPH_RS00440	PF01168	Alanine racemase, N-terminal domain
CVPH_RS00445	PF10418	Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
CVPH_RS00450	PF00696	Amino acid kinase family
CVPH_RS00455	PF00403	Heavy-metal-associated domain
CVPH_RS00460	PF00403	Heavy-metal-associated domain
CVPH_RS00465	PF00403	Heavy-metal-associated domain
CVPH_RS00555	PF04984	Phage tail sheath protein subtilisin-like domain
CVPH_RS00555	PF17482	Phage tail sheath C-terminal domain
CVPH_RS00595	PF01641	SelR domain
CVPH_RS00600	PF12627	Probable RNA and SrmB- binding site of polymerase A
CVPH_RS00600	PF01743	Poly A polymerase head domain
CVPH_RS00625	PF01926	50S ribosome-binding GTPase
CVPH_RS00640	PF00034	Cytochrome c
CVPH_RS00645	PF05697	Bacterial trigger factor protein (TF)
CVPH_RS00645	PF05698	Bacterial trigger factor protein (TF) C-terminus
CVPH_RS00645	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
CVPH_RS00650	PF00574	Clp protease
CVPH_RS00655	PF06689	ClpX C4-type zinc finger
CVPH_RS00655	PF10431	C-terminal, D2-small domain, of ClpB protein 
CVPH_RS00655	PF07724	AAA domain (Cdc48 subfamily)
CVPH_RS00660	PF13167	GTP-binding GTPase N-terminal
CVPH_RS00660	PF16360	GTP-binding GTPase Middle Region
CVPH_RS00660	PF01926	50S ribosome-binding GTPase
CVPH_RS00665	PF02190	ATP-dependent protease La (LON) substrate-binding domain 
CVPH_RS00665	PF05362	Lon protease (S16) C-terminal proteolytic domain
CVPH_RS00665	PF00004	ATPase family associated with various cellular activities (AAA)
CVPH_RS00690	PF10411	Disulfide bond isomerase protein N-terminus
CVPH_RS00690	PF13098	Thioredoxin-like domain
CVPH_RS00695	PF02789	Cytosol aminopeptidase family, N-terminal domain
CVPH_RS00695	PF00883	Cytosol aminopeptidase family, catalytic domain
CVPH_RS00710	PF00753	Metallo-beta-lactamase superfamily
CVPH_RS00710	PF00258	Flavodoxin
CVPH_RS00730	PF07556	Protein of unknown function (DUF1538)
CVPH_RS00735	PF07556	Protein of unknown function (DUF1538)
CVPH_RS00740	PF01063	Amino-transferase class IV
CVPH_RS00750	PF02618	YceG-like family
CVPH_RS00755	PF02223	Thymidylate kinase
CVPH_RS00760	PF09115	DNA polymerase III, delta subunit, C terminal
CVPH_RS00765	PF00202	Aminotransferase class-III
CVPH_RS00780	PF13686	DsrE/DsrF/DrsH-like family
CVPH_RS00785	PF01206	Sulfurtransferase TusA
CVPH_RS00790	PF01435	Peptidase family M48
CVPH_RS00790	PF07720	Tetratricopeptide repeat
CVPH_RS00795	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
CVPH_RS00800	PF01725	Ham1 family
CVPH_RS00805	PF04055	Radical SAM superfamily
CVPH_RS00805	PF06969	HemN C-terminal domain
CVPH_RS00825	PF07731	Multicopper oxidase
CVPH_RS00825	PF07732	Multicopper oxidase
CVPH_RS00825	PF00394	Multicopper oxidase
CVPH_RS00825	PF10518	TAT (twin-arginine translocation) pathway signal sequence
CVPH_RS00885	PF00664	ABC transporter transmembrane region
CVPH_RS00885	PF00005	ABC transporter
CVPH_RS00945	PF08241	Methyltransferase domain
CVPH_RS00950	PF01297	Zinc-uptake complex component A periplasmic
CVPH_RS00955	PF08003	Protein of unknown function (DUF1698)
CVPH_RS00965	PF01765	Ribosome recycling factor
CVPH_RS00970	PF00696	Amino acid kinase family
CVPH_RS00975	PF17760	UvrA interaction domain
CVPH_RS00975	PF17755	UvrA DNA-binding domain
CVPH_RS00975	PF00005	ABC transporter
CVPH_RS00985	PF00551	Formyl transferase
CVPH_RS00990	PF02769	AIR synthase related protein, C-terminal domain
CVPH_RS00990	PF00586	AIR synthase related protein, N-terminal domain
CVPH_RS00995	PF01066	CDP-alcohol phosphatidyltransferase
CVPH_RS01000	PF00308	Bacterial dnaA  protein
CVPH_RS01010	PF14824	Sirohaem biosynthesis protein central
CVPH_RS01010	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
CVPH_RS01010	PF10414	Sirohaem synthase dimerisation region
CVPH_RS01030	PF16327	Cytochrome c-type biogenesis protein CcmF C-terminal
CVPH_RS01030	PF01578	Cytochrome C assembly protein
CVPH_RS01040	PF01546	Peptidase family M20/M25/M40
CVPH_RS01040	PF07687	Peptidase dimerisation domain
CVPH_RS01045	PF01746	tRNA (Guanine-1)-methyltransferase
CVPH_RS01290	PF07352	Bacteriophage Mu Gam like protein
CVPH_RS01360	PF00543	Nitrogen regulatory protein P-II
CVPH_RS01365	PF00909	Ammonium Transporter Family
CVPH_RS01370	PF00701	Dihydrodipicolinate synthetase family
CVPH_RS01375	PF06804	NlpB/DapX lipoprotein
CVPH_RS01380	PF00533	BRCA1 C Terminus (BRCT) domain
CVPH_RS01380	PF03120	NAD-dependent DNA ligase OB-fold domain
CVPH_RS01380	PF01653	NAD-dependent DNA ligase adenylation domain
CVPH_RS01385	PF00543	Nitrogen regulatory protein P-II
CVPH_RS01400	PF00571	CBS domain
CVPH_RS01405	PF03861	ANTAR domain
CVPH_RS01405	PF08376	Nitrate and nitrite sensing
CVPH_RS01410	PF00902	Sec-independent protein translocase protein (TatC)
CVPH_RS01415	PF02416	mttA/Hcf106 family
CVPH_RS01420	PF02416	mttA/Hcf106 family
CVPH_RS01425	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
CVPH_RS01430	PF01502	Phosphoribosyl-AMP cyclohydrolase
CVPH_RS01495	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
CVPH_RS01495	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CVPH_RS01525	PF01638	HxlR-like helix-turn-helix
CVPH_RS01530	PF00472	RF-1 domain
CVPH_RS01530	PF03462	PCRF domain
CVPH_RS01535	PF00312	Ribosomal protein S15
CVPH_RS01540	PF03279	Bacterial lipid A biosynthesis acyltransferase
CVPH_RS01545	PF08278	DNA primase DnaG DnaB-binding 
CVPH_RS01545	PF01807	CHC2 zinc finger
CVPH_RS01545	PF10410	DnaB-helicase binding domain of primase
CVPH_RS01545	PF08275	DNA primase catalytic core, N-terminal domain
CVPH_RS01545	PF13662	Toprim domain
CVPH_RS01550	PF03717	Penicillin-binding Protein dimerisation domain
CVPH_RS01550	PF00905	Penicillin binding protein transpeptidase domain
CVPH_RS01560	PF01795	MraW methylase family
CVPH_RS01565	PF02381	MraZ protein, putative antitoxin-like
CVPH_RS01580	PF04290	Tripartite ATP-independent periplasmic transporters, DctQ component
CVPH_RS01590	PF00521	DNA gyrase/topoisomerase IV, subunit A
CVPH_RS01590	PF03989	DNA gyrase C-terminal domain, beta-propeller
CVPH_RS01600	PF02649	Type I GTP cyclohydrolase folE2
CVPH_RS01605	PF00793	DAHP synthetase I family
CVPH_RS01610	PF00521	DNA gyrase/topoisomerase IV, subunit A
CVPH_RS01610	PF03989	DNA gyrase C-terminal domain, beta-propeller
CVPH_RS01620	PF00009	Elongation factor Tu GTP binding domain
CVPH_RS01620	PF16658	Class II release factor RF3, C-terminal domain
CVPH_RS01620	PF03144	Elongation factor Tu domain 2
CVPH_RS01625	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
CVPH_RS01630	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 
CVPH_RS01630	PF00953	Glycosyl transferase family 4
CVPH_RS01640	PF00037	4Fe-4S binding domain
CVPH_RS01685	PF05958	tRNA (Uracil-5-)-methyltransferase
CVPH_RS01700	PF07690	Major Facilitator Superfamily
CVPH_RS01705	PF00933	Glycosyl hydrolase family 3 N terminal domain
CVPH_RS01740	PF04055	Radical SAM superfamily
CVPH_RS01745	PF08534	Redoxin
CVPH_RS01770	PF01467	Cytidylyltransferase-like
CVPH_RS01775	PF00753	Metallo-beta-lactamase superfamily
CVPH_RS01795	PF00849	RNA pseudouridylate synthase
CVPH_RS01795	PF01479	S4 domain
CVPH_RS01820	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
CVPH_RS01820	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
CVPH_RS01820	PF06827	Zinc finger found in FPG and IleRS
CVPH_RS01840	PF01571	Aminomethyltransferase folate-binding domain
CVPH_RS01845	PF03600	Citrate transporter
CVPH_RS01850	PF03309	Type III pantothenate kinase
CVPH_RS01855	PF00579	tRNA synthetases class I (W and Y)
CVPH_RS01865	PF01479	S4 domain
CVPH_RS01865	PF00849	RNA pseudouridylate synthase
CVPH_RS01870	PF06827	Zinc finger found in FPG and IleRS
CVPH_RS01870	PF00133	tRNA synthetases class I (I, L, M and V)
CVPH_RS01870	PF08264	Anticodon-binding domain of tRNA
CVPH_RS01875	PF01761	3-dehydroquinate synthase
CVPH_RS01885	PF02686	Glu-tRNAGln amidotransferase C subunit
CVPH_RS01890	PF01425	Amidase
CVPH_RS01895	PF02934	GatB/GatE catalytic domain
CVPH_RS01895	PF02637	GatB domain
CVPH_RS01900	PF02696	Uncharacterized ACR, YdiU/UPF0061 family
CVPH_RS01905	PF02163	Peptidase family M50
CVPH_RS01910	PF04073	Aminoacyl-tRNA editing domain
CVPH_RS01910	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
CVPH_RS01910	PF03129	Anticodon binding domain
CVPH_RS01915	PF02666	Phosphatidylserine decarboxylase
CVPH_RS01920	PF01595	Cyclin M transmembrane N-terminal domain
CVPH_RS01920	PF03471	Transporter associated domain
CVPH_RS01920	PF00571	CBS domain
CVPH_RS01925	PF03952	Enolase, N-terminal domain
CVPH_RS01925	PF00113	Enolase, C-terminal TIM barrel domain
CVPH_RS01930	PF00226	DnaJ domain
CVPH_RS01930	PF01556	DnaJ C terminal domain
CVPH_RS01930	PF00684	DnaJ central domain
CVPH_RS01935	PF00012	Hsp70 protein
CVPH_RS01940	PF01467	Cytidylyltransferase-like
CVPH_RS01950	PF00719	Inorganic pyrophosphatase
CVPH_RS01955	PF01612	3'-5' exonuclease
CVPH_RS01955	PF00570	HRDC domain
CVPH_RS01970	PF00989	PAS fold
CVPH_RS01970	PF00672	HAMP domain
CVPH_RS01970	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CVPH_RS01970	PF00512	His Kinase A (phospho-acceptor) domain
CVPH_RS01975	PF00072	Response regulator receiver domain
CVPH_RS01975	PF00486	Transcriptional regulatory protein, C terminal
CVPH_RS01980	PF02254	TrkA-N domain
CVPH_RS01980	PF02080	TrkA-C domain
CVPH_RS01985	PF02386	Cation transport protein
CVPH_RS01990	PF06733	DEAD_2
CVPH_RS01990	PF13307	Helicase C-terminal domain
CVPH_RS01995	PF00348	Polyprenyl synthetase
CVPH_RS02000	PF01728	FtsJ-like methyltransferase
CVPH_RS02005	PF03144	Elongation factor Tu domain 2
CVPH_RS02005	PF00009	Elongation factor Tu GTP binding domain
CVPH_RS02005	PF00679	Elongation factor G C-terminus
CVPH_RS02010	PF00873	AcrB/AcrD/AcrF family
CVPH_RS02020	PF03190	Protein of unknown function, DUF255
CVPH_RS02060	PF01447	Thermolysin metallopeptidase, catalytic domain
CVPH_RS02060	PF02868	Thermolysin metallopeptidase, alpha-helical domain
CVPH_RS02060	PF03413	Peptidase propeptide and YPEB domain
CVPH_RS02065	PF01330	RuvA N terminal domain
CVPH_RS02065	PF07499	RuvA, C-terminal domain
CVPH_RS02070	PF00694	Aconitase C-terminal domain
CVPH_RS02075	PF00330	Aconitase family (aconitate hydratase)
CVPH_RS02080	PF00733	Asparagine synthase
CVPH_RS02080	PF13537	Glutamine amidotransferase domain
CVPH_RS02085	PF00075	RNase H
CVPH_RS02125	PF03364	Polyketide cyclase / dehydrase and lipid transport
CVPH_RS02130	PF01668	SmpB protein
CVPH_RS02135	PF00216	Bacterial DNA-binding protein
CVPH_RS02140	PF00334	Nucleoside diphosphate kinase
CVPH_RS02145	PF04055	Radical SAM superfamily
CVPH_RS02155	PF04551	GcpE protein
CVPH_RS02165	PF02779	Transketolase, pyrimidine binding domain
CVPH_RS02165	PF02780	Transketolase, C-terminal domain
CVPH_RS02165	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
CVPH_RS02170	PF01136	Peptidase family U32
CVPH_RS02170	PF16325	Peptidase family U32 C-terminal domain
CVPH_RS02175	PF05175	Methyltransferase small domain
CVPH_RS02180	PF00462	Glutaredoxin
CVPH_RS02210	PF18072	Formylglycinamide ribonucleotide amidotransferase linker domain
CVPH_RS02210	PF18076	Formylglycinamide ribonucleotide amidotransferase N-terminal
CVPH_RS02210	PF02769	AIR synthase related protein, C-terminal domain
CVPH_RS02215	PF01709	Transcriptional regulator
CVPH_RS02220	PF02445	Quinolinate synthetase A protein
CVPH_RS02225	PF02938	GAD domain
CVPH_RS02225	PF00152	tRNA synthetases class II (D, K and N) 
CVPH_RS02225	PF01336	OB-fold nucleic acid binding domain
CVPH_RS02235	PF00557	Metallopeptidase family M24
CVPH_RS02240	PF01435	Peptidase family M48
CVPH_RS02245	PF04011	LemA family
CVPH_RS02250	PF04287	tRNA pseudouridine synthase C
CVPH_RS02250	PF00849	RNA pseudouridylate synthase
CVPH_RS02265	PF01430	Hsp33 protein
CVPH_RS02270	PF01430	Hsp33 protein
CVPH_RS02295	PF00929	Exonuclease
CVPH_RS02300	PF01192	RNA polymerase Rpb6 
CVPH_RS02350	PF11490	DNA polymerase III polC-type N-terminus II
CVPH_RS02350	PF07733	Bacterial DNA polymerase III alpha NTPase domain
CVPH_RS02350	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
CVPH_RS02350	PF14579	Helix-hairpin-helix motif
CVPH_RS02350	PF14480	DNA polymerase III polC-type N-terminus I
CVPH_RS02350	PF02811	PHP domain
CVPH_RS02350	PF00929	Exonuclease
CVPH_RS02355	PF13193	AMP-binding enzyme C-terminal domain
CVPH_RS02355	PF00501	AMP-binding enzyme
CVPH_RS02355	PF16177	Acetyl-coenzyme A synthetase N-terminus
CVPH_RS02370	PF00490	Delta-aminolevulinic acid dehydratase
CVPH_RS02375	PF13667	ThiC-associated domain 
CVPH_RS02375	PF01964	Radical SAM ThiC family
CVPH_RS02380	PF04413	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
CVPH_RS02385	PF01018	GTP1/OBG
CVPH_RS02385	PF01926	50S ribosome-binding GTPase
CVPH_RS02390	PF00696	Amino acid kinase family
CVPH_RS02390	PF01472	PUA domain
CVPH_RS02435	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
CVPH_RS02440	PF02548	Ketopantoate hydroxymethyltransferase
CVPH_RS02445	PF02569	Pantoate-beta-alanine ligase
CVPH_RS02450	PF01106	NifU-like domain
CVPH_RS02460	PF00586	AIR synthase related protein, N-terminal domain
CVPH_RS02460	PF02769	AIR synthase related protein, C-terminal domain
CVPH_RS02465	PF01258	Prokaryotic dksA/traR C4-type zinc finger
CVPH_RS02470	PF13419	Haloacid dehalogenase-like hydrolase
CVPH_RS02475	PF00585	C-terminal regulatory domain of Threonine dehydratase
CVPH_RS02475	PF00291	Pyridoxal-phosphate dependent enzyme
CVPH_RS02500	PF00180	Isocitrate/isopropylmalate dehydrogenase
CVPH_RS02620	PF00589	Phage integrase family
CVPH_RS02620	PF13495	Phage integrase, N-terminal SAM-like domain
CVPH_RS02625	PF00155	Aminotransferase class I and II
CVPH_RS02630	PF04851	Type III restriction enzyme, res subunit
CVPH_RS02630	PF02151	UvrB/uvrC motif
CVPH_RS02630	PF12344	Ultra-violet resistance protein B
CVPH_RS02630	PF17757	UvrB interaction domain
CVPH_RS02630	PF00271	Helicase conserved C-terminal domain
CVPH_RS02635	PF04055	Radical SAM superfamily
CVPH_RS02650	PF01264	Chorismate synthase
CVPH_RS02670	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
CVPH_RS02690	PF01494	FAD binding domain
CVPH_RS02695	PF01243	Pyridoxamine 5'-phosphate oxidase
CVPH_RS02695	PF10590	Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
CVPH_RS02700	PF01488	Shikimate / quinate 5-dehydrogenase
CVPH_RS02700	PF08501	Shikimate dehydrogenase substrate binding domain
CVPH_RS02700	PF18317	Shikimate 5'-dehydrogenase C-terminal domain
CVPH_RS02720	PF02673	Bacitracin resistance protein BacA
CVPH_RS02725	PF01569	PAP2 superfamily
CVPH_RS02730	PF01433	Peptidase family M1 domain
CVPH_RS02730	PF11940	Domain of unknown function (DUF3458) Ig-like fold
CVPH_RS02730	PF17432	Domain of unknown function (DUF3458_C) ARM repeats
CVPH_RS02735	PF18146	Damage-inducible protein CinA KH domain
CVPH_RS02735	PF02464	Competence-damaged protein
CVPH_RS02735	PF00994	Probable molybdopterin binding domain
CVPH_RS02750	PF01207	Dihydrouridine synthase (Dus)
CVPH_RS02755	PF02491	SHS2 domain inserted in FTSA
CVPH_RS02760	PF03331	UDP-3-O-acyl N-acetylglycosamine deacetylase
CVPH_RS02765	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
CVPH_RS02765	PF00205	Thiamine pyrophosphate enzyme, central domain
CVPH_RS02765	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
CVPH_RS02770	PF10369	Small subunit of acetolactate synthase
CVPH_RS02775	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
CVPH_RS02775	PF07991	Acetohydroxy acid isomeroreductase, NADPH-binding domain
CVPH_RS02780	PF01066	CDP-alcohol phosphatidyltransferase
CVPH_RS02785	PF08502	LeuA allosteric (dimerisation) domain
CVPH_RS02785	PF00682	HMGL-like
CVPH_RS02800	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
CVPH_RS02800	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
CVPH_RS02805	PF00202	Aminotransferase class-III
CVPH_RS02815	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
CVPH_RS02820	PF00571	CBS domain
CVPH_RS02820	PF01769	Divalent cation transporter
CVPH_RS02820	PF03448	MgtE intracellular N domain
CVPH_RS02835	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
CVPH_RS02835	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
CVPH_RS02835	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
CVPH_RS02835	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
CVPH_RS02845	PF00456	Transketolase, thiamine diphosphate binding domain
CVPH_RS02845	PF17831	Pyruvate dehydrogenase E1 component middle domain
CVPH_RS02855	PF03466	LysR substrate binding domain
CVPH_RS02855	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CVPH_RS02875	PF00892	EamA-like transporter family
CVPH_RS02880	PF00575	S1 RNA binding domain
CVPH_RS02880	PF00013	KH domain
CVPH_RS02880	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
CVPH_RS02880	PF01138	3' exoribonuclease family, domain 1
CVPH_RS02880	PF03725	3' exoribonuclease family, domain 2
CVPH_RS02910	PF13187	4Fe-4S dicluster domain
CVPH_RS02910	PF12838	4Fe-4S dicluster domain
CVPH_RS02930	PF09242	Flavocytochrome c sulphide dehydrogenase, flavin-binding
CVPH_RS02930	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CVPH_RS02930	PF10518	TAT (twin-arginine translocation) pathway signal sequence
CVPH_RS02950	PF00115	Cytochrome C and Quinol oxidase polypeptide I
CVPH_RS02955	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
CVPH_RS02960	PF00403	Heavy-metal-associated domain
CVPH_RS02990	PF07963	Prokaryotic N-terminal methylation motif
CVPH_RS02990	PF11612	Type II secretion system (T2SS), protein J
CVPH_RS03000	PF00482	Type II secretion system (T2SS), protein F
CVPH_RS03005	PF00482	Type II secretion system (T2SS), protein F
CVPH_RS03015	PF00263	Bacterial type II and III secretion system protein
CVPH_RS03015	PF03958	Bacterial type II/III secretion system short domain
CVPH_RS03020	PF00263	Bacterial type II and III secretion system protein
CVPH_RS03020	PF03958	Bacterial type II/III secretion system short domain
CVPH_RS03025	PF00263	Bacterial type II and III secretion system protein
CVPH_RS03025	PF03958	Bacterial type II/III secretion system short domain
CVPH_RS03030	PF00263	Bacterial type II and III secretion system protein
CVPH_RS03030	PF03958	Bacterial type II/III secretion system short domain
CVPH_RS03080	PF00149	Calcineurin-like phosphoesterase
CVPH_RS03085	PF01168	Alanine racemase, N-terminal domain
CVPH_RS03085	PF00842	Alanine racemase, C-terminal domain
CVPH_RS03090	PF00772	DnaB-like helicase N terminal domain
CVPH_RS03090	PF03796	DnaB-like helicase C terminal domain
CVPH_RS03095	PF01281	Ribosomal protein L9, N-terminal domain
CVPH_RS03095	PF03948	Ribosomal protein L9, C-terminal domain
CVPH_RS03100	PF01084	Ribosomal protein S18
CVPH_RS03105	PF01250	Ribosomal protein S6
CVPH_RS03110	PF00905	Penicillin binding protein transpeptidase domain
CVPH_RS03110	PF14814	Bifunctional transglycosylase second domain
CVPH_RS03110	PF00912	Transglycosylase
CVPH_RS03115	PF00814	Glycoprotease family
CVPH_RS03120	PF01578	Cytochrome C assembly protein
CVPH_RS03130	PF03100	CcmE
CVPH_RS03135	PF08534	Redoxin
CVPH_RS03140	PF00216	Bacterial DNA-binding protein
CVPH_RS03410	PF02844	Phosphoribosylglycinamide synthetase, N domain
CVPH_RS03410	PF02843	Phosphoribosylglycinamide synthetase, C domain
CVPH_RS03410	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
CVPH_RS03500	PF00145	C-5 cytosine-specific DNA methylase
CVPH_RS03595	PF13145	PPIC-type PPIASE domain
CVPH_RS03635	PF01252	Signal peptidase (SPase) II
CVPH_RS03640	PF01266	FAD dependent oxidoreductase
CVPH_RS03650	PF17768	RecJ OB domain
CVPH_RS03650	PF01368	DHH family
CVPH_RS03650	PF02272	DHHA1 domain
CVPH_RS03655	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
CVPH_RS03655	PF02824	TGS domain
CVPH_RS03655	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
CVPH_RS03655	PF03129	Anticodon binding domain
CVPH_RS03660	PF05198	Translation initiation factor IF-3, N-terminal domain
CVPH_RS03660	PF00707	Translation initiation factor IF-3, C-terminal domain
CVPH_RS03665	PF01632	Ribosomal protein L35
CVPH_RS03670	PF00453	Ribosomal protein L20
CVPH_RS03680	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
CVPH_RS03680	PF01409	tRNA synthetases class II core domain (F)
CVPH_RS03685	PF03483	B3/4 domain
CVPH_RS03685	PF03484	tRNA synthetase B5 domain
CVPH_RS03685	PF03147	Ferredoxin-fold anticodon binding domain
CVPH_RS03685	PF01588	Putative tRNA binding domain
CVPH_RS03685	PF17759	Phenylalanyl tRNA synthetase beta chain CLM domain
CVPH_RS03690	PF00216	Bacterial DNA-binding protein
CVPH_RS03715	PF01625	Peptide methionine sulfoxide reductase
CVPH_RS03720	PF00899	ThiF family
CVPH_RS03750	PF00464	Serine hydroxymethyltransferase
CVPH_RS03755	PF03477	ATP cone domain
CVPH_RS03760	PF13472	GDSL-like Lipase/Acylhydrolase family
CVPH_RS03770	PF18073	Rubredoxin metal binding domain
CVPH_RS03775	PF02572	ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
CVPH_RS03775	PF12557	Cob(I)alamin adenosyltransferase N terminal 
CVPH_RS03790	PF07715	TonB-dependent Receptor Plug Domain
CVPH_RS03790	PF00593	TonB dependent receptor
CVPH_RS03795	PF00266	Aminotransferase class-V
CVPH_RS03800	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
CVPH_RS03800	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
CVPH_RS03800	PF01842	ACT domain
CVPH_RS03805	PF01842	ACT domain
CVPH_RS03805	PF00800	Prephenate dehydratase
CVPH_RS03805	PF01817	Chorismate mutase type II
CVPH_RS03810	PF00155	Aminotransferase class I and II
CVPH_RS03815	PF02153	Prephenate dehydrogenase
CVPH_RS03820	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
CVPH_RS03845	PF04358	DsrC like protein
CVPH_RS03850	PF10502	Signal peptidase, peptidase S26 
CVPH_RS03855	PF17762	HTH domain found in ParB protein
CVPH_RS03855	PF02195	ParB-like nuclease domain
CVPH_RS03865	PF03572	Peptidase family S41
CVPH_RS03865	PF13180	PDZ domain
CVPH_RS03885	PF01790	Prolipoprotein diacylglyceryl transferase
CVPH_RS03890	PF00303	Thymidylate synthase
CVPH_RS03910	PF00035	Double-stranded RNA binding motif
CVPH_RS03910	PF14622	Ribonuclease-III-like
CVPH_RS03915	PF07650	KH domain
CVPH_RS03915	PF01926	50S ribosome-binding GTPase
CVPH_RS03920	PF02565	Recombination protein O C terminal
CVPH_RS03920	PF11967	Recombination protein O N terminal
CVPH_RS03925	PF03740	Pyridoxal phosphate biosynthesis protein PdxJ
CVPH_RS03930	PF01648	4'-phosphopantetheinyl transferase superfamily
CVPH_RS03955	PF00578	AhpC/TSA family
CVPH_RS03960	PF00009	Elongation factor Tu GTP binding domain
CVPH_RS03960	PF06421	GTP-binding protein LepA C-terminus
CVPH_RS03960	PF00679	Elongation factor G C-terminus
CVPH_RS03975	PF01578	Cytochrome C assembly protein
CVPH_RS03980	PF02881	SRP54-type protein, helical bundle domain
CVPH_RS03980	PF00448	SRP54-type protein, GTPase domain
CVPH_RS03980	PF02978	Signal peptide binding domain
CVPH_RS03990	PF00815	Histidinol dehydrogenase
CVPH_RS03995	PF01634	ATP phosphoribosyltransferase
CVPH_RS04000	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
CVPH_RS04010	PF02151	UvrB/uvrC motif
CVPH_RS04010	PF01541	GIY-YIG catalytic domain
CVPH_RS04010	PF08459	UvrC Helix-hairpin-helix N-terminal
CVPH_RS04025	PF12848	ABC transporter
CVPH_RS04025	PF00005	ABC transporter
CVPH_RS04025	PF16326	ABC transporter C-terminal domain
CVPH_RS04030	PF03918	Cytochrome C biogenesis protein
CVPH_RS04035	PF01894	Uncharacterised protein family UPF0047
CVPH_RS04045	PF00152	tRNA synthetases class II (D, K and N) 
CVPH_RS04045	PF01336	OB-fold nucleic acid binding domain
CVPH_RS04055	PF02224	Cytidylate kinase
CVPH_RS04060	PF00575	S1 RNA binding domain
CVPH_RS04065	PF00216	Bacterial DNA-binding protein
CVPH_RS04085	PF04241	Protein of unknown function (DUF423)
CVPH_RS04105	PF03193	RsgA GTPase
CVPH_RS04115	PF16491	CAAX prenyl protease N-terminal, five membrane helices
CVPH_RS04115	PF01435	Peptidase family M48
CVPH_RS04120	PF00696	Amino acid kinase family
CVPH_RS04120	PF13840	ACT domain 
CVPH_RS04120	PF01842	ACT domain
CVPH_RS04125	PF01063	Amino-transferase class IV
CVPH_RS04135	PF01202	Shikimate kinase
CVPH_RS04165	PF03279	Bacterial lipid A biosynthesis acyltransferase
CVPH_RS04170	PF00132	Bacterial transferase hexapeptide (six repeats)
CVPH_RS04175	PF02082	Transcriptional regulator
CVPH_RS04180	PF00266	Aminotransferase class-V
CVPH_RS04185	PF01592	NifU-like N terminal domain
CVPH_RS04190	PF01521	Iron-sulphur cluster biosynthesis
CVPH_RS04195	PF07743	HSCB C-terminal oligomerisation domain
CVPH_RS04200	PF00012	Hsp70 protein
CVPH_RS04205	PF00111	2Fe-2S iron-sulfur cluster binding domain
CVPH_RS04230	PF10609	NUBPL iron-transfer P-loop NTPase
CVPH_RS04235	PF08264	Anticodon-binding domain of tRNA
CVPH_RS04235	PF09334	tRNA synthetases class I (M)
CVPH_RS04245	PF01432	Peptidase family M3
CVPH_RS04255	PF02801	Beta-ketoacyl synthase, C-terminal domain
CVPH_RS04255	PF00109	Beta-ketoacyl synthase, N-terminal domain
CVPH_RS04260	PF00550	Phosphopantetheine attachment site
CVPH_RS04265	PF06508	Queuosine biosynthesis protein QueC
CVPH_RS04270	PF00204	DNA gyrase B
CVPH_RS04270	PF00986	DNA gyrase B subunit, carboxyl terminus
CVPH_RS04270	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CVPH_RS04270	PF01751	Toprim domain
CVPH_RS04275	PF00118	TCP-1/cpn60 chaperonin family
CVPH_RS04280	PF00166	Chaperonin 10 Kd subunit
CVPH_RS04285	PF04542	Sigma-70 region 2 
CVPH_RS04285	PF04545	Sigma-70, region 4
CVPH_RS04285	PF00140	Sigma-70 factor, region 1.2
CVPH_RS04290	PF00625	Guanylate kinase
CVPH_RS04295	PF04362	Bacterial Fe(2+) trafficking
CVPH_RS04300	PF03023	Lipid II flippase MurJ
CVPH_RS04305	PF00132	Bacterial transferase hexapeptide (six repeats)
CVPH_RS04305	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2
CVPH_RS04310	PF07977	FabA-like domain
CVPH_RS04315	PF00132	Bacterial transferase hexapeptide (six repeats)
CVPH_RS04315	PF04613	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD  
CVPH_RS04320	PF07244	Surface antigen variable number repeat
CVPH_RS04320	PF01103	Surface antigen
CVPH_RS04325	PF02163	Peptidase family M50
CVPH_RS04325	PF17820	PDZ domain
CVPH_RS04335	PF01678	Diaminopimelate epimerase
CVPH_RS04340	PF00149	Calcineurin-like phosphoesterase
CVPH_RS04345	PF04379	ApaG domain 
CVPH_RS04350	PF00398	Ribosomal RNA adenine dimethylase
CVPH_RS04355	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
CVPH_RS04365	PF00873	AcrB/AcrD/AcrF family
CVPH_RS04370	PF04055	Radical SAM superfamily
CVPH_RS04375	PF03099	Biotin/lipoate A/B protein ligase family
CVPH_RS04380	PF04359	Protein of unknown function (DUF493)
CVPH_RS04385	PF05496	Holliday junction DNA helicase RuvB P-loop domain
CVPH_RS04385	PF17864	RuvB AAA lid domain
CVPH_RS04385	PF05491	RuvB C-terminal winged helix domain
CVPH_RS04405	PF13203	Putative metallopeptidase domain
CVPH_RS04405	PF09967	VWA-like domain (DUF2201)
CVPH_RS04415	PF01274	Malate synthase
CVPH_RS04445	PF00588	SpoU rRNA Methylase family
CVPH_RS04445	PF08032	RNA 2'-O ribose methyltransferase substrate binding
CVPH_RS04450	PF00639	PPIC-type PPIASE domain
CVPH_RS04450	PF09312	SurA N-terminal domain
CVPH_RS04455	PF04453	LPS transport system D
CVPH_RS04460	PF01145	SPFH domain / Band 7 family
CVPH_RS04465	PF01145	SPFH domain / Band 7 family
CVPH_RS04470	PF13393	Histidyl-tRNA synthetase
CVPH_RS04475	PF00709	Adenylosuccinate synthetase
CVPH_RS04480	PF08461	Ribonuclease R winged-helix domain
CVPH_RS04480	PF17876	Cold shock domain
CVPH_RS04480	PF08206	Ribonuclease B OB domain
CVPH_RS04480	PF00773	RNB domain
CVPH_RS04480	PF00575	S1 RNA binding domain
CVPH_RS04485	PF00920	Dehydratase family
CVPH_RS04495	PF00929	Exonuclease
CVPH_RS04500	PF02626	Carboxyltransferase domain, subdomain A and B 
CVPH_RS04505	PF02682	Carboxyltransferase domain, subdomain C and D
CVPH_RS04510	PF03746	LamB/YcsF family
CVPH_RS04520	PF00586	AIR synthase related protein, N-terminal domain
CVPH_RS04520	PF02769	AIR synthase related protein, C-terminal domain
CVPH_RS04525	PF00581	Rhodanese-like domain
CVPH_RS04530	PF00175	Oxidoreductase NAD-binding domain 
CVPH_RS04530	PF00111	2Fe-2S iron-sulfur cluster binding domain
CVPH_RS04530	PF00970	Oxidoreductase FAD-binding domain
CVPH_RS04535	PF00268	Ribonucleotide reductase, small chain
CVPH_RS04540	PF03477	ATP cone domain
CVPH_RS04540	PF02867	Ribonucleotide reductase, barrel domain
CVPH_RS04540	PF00317	Ribonucleotide reductase, all-alpha domain
CVPH_RS04545	PF13193	AMP-binding enzyme C-terminal domain
CVPH_RS04545	PF00501	AMP-binding enzyme
CVPH_RS04550	PF01734	Patatin-like phospholipase
CVPH_RS04555	PF02803	Thiolase, C-terminal domain
CVPH_RS04555	PF00108	Thiolase, N-terminal domain
CVPH_RS04560	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
CVPH_RS04560	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
CVPH_RS04560	PF00378	Enoyl-CoA hydratase/isomerase
CVPH_RS04565	PF02770	Acyl-CoA dehydrogenase, middle domain
CVPH_RS04565	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
CVPH_RS04565	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
CVPH_RS04565	PF09317	Domain of unknown function (DUF1974)
CVPH_RS04580	PF00762	Ferrochelatase
CVPH_RS04620	PF00795	Carbon-nitrogen hydrolase
CVPH_RS04620	PF02540	NAD synthase
CVPH_RS04645	PF03458	UPF0126 domain
CVPH_RS04670	PF00425	chorismate binding enzyme
CVPH_RS04670	PF04715	Anthranilate synthase component I, N terminal region
CVPH_RS04680	PF00691	OmpA family
CVPH_RS04685	PF07676	WD40-like Beta Propeller Repeat
CVPH_RS04685	PF04052	TolB amino-terminal domain
CVPH_RS04690	PF04384	Iron-sulphur cluster assembly
CVPH_RS04695	PF02824	TGS domain
CVPH_RS04695	PF04607	Region found in RelA / SpoT proteins
CVPH_RS04695	PF13291	ACT domain
CVPH_RS04700	PF13525	Outer membrane lipoprotein
CVPH_RS04705	PF07690	Major Facilitator Superfamily
CVPH_RS04710	PF00436	Single-strand binding protein family
CVPH_RS04715	PF01230	HIT domain
CVPH_RS04770	PF01029	NusB family
CVPH_RS04775	PF00885	6,7-dimethyl-8-ribityllumazine synthase
CVPH_RS04780	PF00925	GTP cyclohydrolase II
CVPH_RS04780	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
CVPH_RS04785	PF00677	Lumazine binding domain
CVPH_RS04790	PF03631	Virulence factor BrkB
CVPH_RS04795	PF00005	ABC transporter
CVPH_RS04795	PF12848	ABC transporter
CVPH_RS04800	PF01098	Cell cycle protein
CVPH_RS04805	PF03033	Glycosyltransferase family 28 N-terminal domain
CVPH_RS04805	PF04101	Glycosyltransferase family 28 C-terminal domain
CVPH_RS04810	PF06968	Biotin and Thiamin Synthesis associated domain
CVPH_RS04810	PF04055	Radical SAM superfamily
CVPH_RS04815	PF03951	Glutamine synthetase, beta-Grasp domain
CVPH_RS04815	PF00120	Glutamine synthetase, catalytic domain
CVPH_RS04825	PF01218	Coproporphyrinogen III oxidase
CVPH_RS04830	PF01300	Telomere recombination
CVPH_RS04835	PF00589	Phage integrase family
CVPH_RS04835	PF02899	Phage integrase, N-terminal SAM-like domain
CVPH_RS04840	PF00183	Hsp90 protein
CVPH_RS04845	PF01467	Cytidylyltransferase-like
CVPH_RS04865	PF14602	Hexapeptide repeat of succinyl-transferase
CVPH_RS04870	PF00588	SpoU rRNA Methylase family
CVPH_RS04875	PF00459	Inositol monophosphatase family
CVPH_RS04880	PF00106	short chain dehydrogenase
CVPH_RS04885	PF02646	RmuC family
CVPH_RS04890	PF13419	Haloacid dehalogenase-like hydrolase
CVPH_RS04915	PF01783	Ribosomal L32p protein family
CVPH_RS04920	PF02504	Fatty acid synthesis protein
CVPH_RS04925	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
CVPH_RS04925	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
CVPH_RS04930	PF00348	Polyprenyl synthetase
CVPH_RS04935	PF02609	Exonuclease VII small subunit
CVPH_RS04945	PF12627	Probable RNA and SrmB- binding site of polymerase A
CVPH_RS04945	PF12626	Polymerase A arginine-rich C-terminus
CVPH_RS04945	PF01743	Poly A polymerase head domain
CVPH_RS04950	PF14489	QueF-like protein
CVPH_RS04955	PF03739	Lipopolysaccharide export system permease LptF/LptG
CVPH_RS04960	PF07497	Rho termination factor, RNA-binding domain
CVPH_RS04960	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
CVPH_RS04960	PF07498	Rho termination factor, N-terminal domain
CVPH_RS04965	PF00085	Thioredoxin
CVPH_RS04970	PF01842	ACT domain
CVPH_RS04970	PF08335	GlnD PII-uridylyltransferase
CVPH_RS04970	PF01909	Nucleotidyltransferase domain
CVPH_RS04970	PF01966	HD domain
CVPH_RS04975	PF00749	tRNA synthetases class I (E and Q), catalytic domain
CVPH_RS04990	PF01098	Cell cycle protein
CVPH_RS04995	PF13406	Transglycosylase SLT domain
CVPH_RS05000	PF00768	D-alanyl-D-alanine carboxypeptidase
CVPH_RS05000	PF07943	Penicillin-binding protein 5, C-terminal domain
CVPH_RS05005	PF01063	Amino-transferase class IV
CVPH_RS05010	PF01636	Phosphotransferase enzyme family
CVPH_RS05015	PF00483	Nucleotidyl transferase
CVPH_RS05025	PF12169	DNA polymerase III subunits gamma and tau domain III
CVPH_RS05025	PF12170	DNA polymerase III tau subunit V interacting with alpha
CVPH_RS05025	PF12168	DNA polymerase III subunits tau domain IV DnaB-binding
CVPH_RS05030	PF02575	YbaB/EbfC DNA-binding family
CVPH_RS05035	PF13662	Toprim domain
CVPH_RS05035	PF02132	RecR protein
CVPH_RS05050	PF01541	GIY-YIG catalytic domain
CVPH_RS05055	PF08264	Anticodon-binding domain of tRNA
CVPH_RS05055	PF10458	Valyl tRNA synthetase tRNA binding arm
CVPH_RS05055	PF00133	tRNA synthetases class I (I, L, M and V)
CVPH_RS05065	PF00571	CBS domain
CVPH_RS05065	PF00478	IMP dehydrogenase / GMP reductase domain
CVPH_RS05125	PF03129	Anticodon binding domain
CVPH_RS05125	PF13393	Histidyl-tRNA synthetase
CVPH_RS05130	PF09976	Tetratricopeptide repeat-like domain
CVPH_RS05135	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
CVPH_RS05135	PF01926	50S ribosome-binding GTPase
CVPH_RS05150	PF00117	Glutamine amidotransferase class-I
CVPH_RS05150	PF06418	CTP synthase N-terminus
CVPH_RS05185	PF01555	DNA methylase
CVPH_RS05185	PF18273	Type III R-M EcoP15I C-terminal domain
CVPH_RS05195	PF00664	ABC transporter transmembrane region
CVPH_RS05195	PF00005	ABC transporter
CVPH_RS05200	PF00171	Aldehyde dehydrogenase family
CVPH_RS05205	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
CVPH_RS05205	PF00205	Thiamine pyrophosphate enzyme, central domain
CVPH_RS05205	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
CVPH_RS05220	PF05114	Protein of unknown function (DUF692)
CVPH_RS05265	PF02885	Glycosyl transferase family, helical bundle domain
CVPH_RS05265	PF00591	Glycosyl transferase family, a/b domain
CVPH_RS05280	PF00313	'Cold-shock' DNA-binding domain
CVPH_RS05285	PF05724	Thiopurine S-methyltransferase (TPMT)
CVPH_RS05290	PF05724	Thiopurine S-methyltransferase (TPMT)
CVPH_RS05300	PF03167	Uracil DNA glycosylase superfamily
CVPH_RS05305	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
CVPH_RS05305	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
CVPH_RS05350	PF00384	Molybdopterin oxidoreductase
CVPH_RS05350	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
CVPH_RS05350	PF01568	Molydopterin dinucleotide binding domain
CVPH_RS05355	PF00069	Protein kinase domain
CVPH_RS05355	PF03793	PASTA domain
CVPH_RS05360	PF07690	Major Facilitator Superfamily
CVPH_RS05365	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
CVPH_RS05365	PF18267	Rubredoxin NAD+ reductase C-terminal domain
CVPH_RS05365	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CVPH_RS05365	PF04324	BFD-like [2Fe-2S] binding domain
CVPH_RS05365	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
CVPH_RS05370	PF02391	MoaE protein
CVPH_RS05375	PF12804	MobA-like NTP transferase domain
CVPH_RS05380	PF00994	Probable molybdopterin binding domain
CVPH_RS05380	PF03454	MoeA C-terminal region (domain IV)
CVPH_RS05380	PF03453	MoeA N-terminal region (domain I and II)
CVPH_RS05385	PF01967	MoaC family
CVPH_RS05390	PF06463	Molybdenum Cofactor Synthesis C
CVPH_RS05390	PF04055	Radical SAM superfamily
CVPH_RS05395	PF02597	ThiS family
CVPH_RS05425	PF02613	Nitrate reductase delta subunit
CVPH_RS05450	PF07690	Major Facilitator Superfamily
CVPH_RS05455	PF07690	Major Facilitator Superfamily
CVPH_RS05465	PF00994	Probable molybdopterin binding domain
CVPH_RS05475	PF00092	von Willebrand factor type A domain
CVPH_RS05480	PF08406	CbbQ/NirQ/NorQ C-terminal 
CVPH_RS05480	PF07728	AAA domain (dynein-related subfamily)
CVPH_RS05485	PF02788	Ribulose bisphosphate carboxylase large chain, N-terminal domain
CVPH_RS05485	PF00016	Ribulose bisphosphate carboxylase large chain, catalytic domain
CVPH_RS05490	PF03466	LysR substrate binding domain
CVPH_RS05490	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CVPH_RS05505	PF01960	ArgJ family
CVPH_RS05510	PF00528	Binding-protein-dependent transport system inner membrane component
CVPH_RS05520	PF08402	TOBE domain
CVPH_RS05520	PF00005	ABC transporter
CVPH_RS05525	PF07731	Multicopper oxidase
CVPH_RS05525	PF10518	TAT (twin-arginine translocation) pathway signal sequence
CVPH_RS05525	PF00394	Multicopper oxidase
CVPH_RS05525	PF07732	Multicopper oxidase
CVPH_RS05570	PF00210	Ferritin-like domain
CVPH_RS05590	PF02899	Phage integrase, N-terminal SAM-like domain
CVPH_RS05590	PF00589	Phage integrase family
CVPH_RS05595	PF16916	Dimerisation domain of Zinc Transporter
CVPH_RS05595	PF01545	Cation efflux family
CVPH_RS05600	PF02075	Crossover junction endodeoxyribonuclease RuvC
CVPH_RS05605	PF00085	Thioredoxin
CVPH_RS05610	PF03960	ArsC family
CVPH_RS05625	PF02580	D-Tyr-tRNA(Tyr) deacylase
CVPH_RS05630	PF02092	Glycyl-tRNA synthetase beta subunit
CVPH_RS05635	PF05209	Septum formation inhibitor MinC, N-terminal domain
CVPH_RS05635	PF03775	Septum formation inhibitor MinC, C-terminal domain
CVPH_RS05650	PF02472	Biopolymer transport protein ExbD/TolR
CVPH_RS05655	PF01618	MotA/TolQ/ExbB proton channel family
CVPH_RS05660	PF05491	RuvB C-terminal winged helix domain
CVPH_RS05660	PF05496	Holliday junction DNA helicase RuvB P-loop domain
CVPH_RS05660	PF17864	RuvB AAA lid domain
CVPH_RS05670	PF01488	Shikimate / quinate 5-dehydrogenase
CVPH_RS05670	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
CVPH_RS05670	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
CVPH_RS05675	PF00472	RF-1 domain
CVPH_RS05675	PF03462	PCRF domain
CVPH_RS05680	PF00950	ABC 3 transport family
CVPH_RS05685	PF01475	Ferric uptake regulator family
CVPH_RS05695	PF01343	Peptidase family S49
CVPH_RS05695	PF06965	Na+/H+ antiporter 1
CVPH_RS05700	PF00005	ABC transporter
CVPH_RS05705	PF03379	CcmB protein
CVPH_RS05710	PF00438	S-adenosylmethionine synthetase, N-terminal domain
CVPH_RS05710	PF02772	S-adenosylmethionine synthetase, central domain
CVPH_RS05710	PF02773	S-adenosylmethionine synthetase, C-terminal domain
CVPH_RS05715	PF00670	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
CVPH_RS05715	PF05221	S-adenosyl-L-homocysteine hydrolase
CVPH_RS05720	PF02091	Glycyl-tRNA synthetase alpha subunit
CVPH_RS05725	PF09335	SNARE associated Golgi protein
CVPH_RS05735	PF00924	Mechanosensitive ion channel
CVPH_RS05740	PF00919	Uncharacterized protein family UPF0004
CVPH_RS05740	PF01938	TRAM domain
CVPH_RS05740	PF04055	Radical SAM superfamily
CVPH_RS05745	PF02630	SCO1/SenC
CVPH_RS05755	PF02562	PhoH-like protein
CVPH_RS05765	PF04356	Protein of unknown function (DUF489)
CVPH_RS05770	PF01649	Ribosomal protein S20
CVPH_RS05780	PF02601	Exonuclease VII, large subunit
CVPH_RS05780	PF13742	OB-fold nucleic acid binding domain
CVPH_RS05785	PF01476	LysM domain
CVPH_RS05785	PF08525	Opacity-associated protein A N-terminal motif
CVPH_RS05785	PF01551	Peptidase family M23
CVPH_RS05805	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
CVPH_RS05820	PF02542	YgbB family
CVPH_RS05825	PF08245	Mur ligase middle domain
CVPH_RS05825	PF02875	Mur ligase family, glutamate ligase domain
CVPH_RS05825	PF01225	Mur ligase family, catalytic domain
CVPH_RS05835	PF07478	D-ala D-ala ligase C-terminus
CVPH_RS05835	PF01820	D-ala D-ala ligase N-terminus
CVPH_RS05840	PF03799	Cell division protein FtsQ
CVPH_RS05840	PF08478	POTRA domain, FtsQ-type
CVPH_RS05850	PF01476	LysM domain
CVPH_RS05850	PF01464	Transglycosylase SLT domain
CVPH_RS05855	PF01722	BolA-like protein
CVPH_RS05860	PF00111	2Fe-2S iron-sulfur cluster binding domain
CVPH_RS05860	PF00970	Oxidoreductase FAD-binding domain
CVPH_RS05860	PF00175	Oxidoreductase NAD-binding domain 
CVPH_RS05920	PF01420	Type I restriction modification DNA specificity domain
CVPH_RS05925	PF08245	Mur ligase middle domain
CVPH_RS05925	PF02875	Mur ligase family, glutamate ligase domain
CVPH_RS05930	PF01027	Inhibitor of apoptosis-promoting Bax1
CVPH_RS05940	PF03447	Homoserine dehydrogenase, NAD binding domain
CVPH_RS05940	PF00742	Homoserine dehydrogenase
CVPH_RS05940	PF01842	ACT domain
CVPH_RS05945	PF00291	Pyridoxal-phosphate dependent enzyme
CVPH_RS05950	PF00291	Pyridoxal-phosphate dependent enzyme
CVPH_RS05960	PF03653	Uncharacterised protein family (UPF0093)
CVPH_RS05970	PF00209	Sodium:neurotransmitter symporter family
CVPH_RS05975	PF00209	Sodium:neurotransmitter symporter family
CVPH_RS05980	PF00209	Sodium:neurotransmitter symporter family
CVPH_RS05990	PF05193	Peptidase M16 inactive domain
CVPH_RS05990	PF00675	Insulinase (Peptidase family M16)
CVPH_RS05995	PF00675	Insulinase (Peptidase family M16)
CVPH_RS05995	PF05193	Peptidase M16 inactive domain
CVPH_RS06000	PF01794	Ferric reductase like transmembrane component
CVPH_RS06005	PF00174	Oxidoreductase molybdopterin binding domain
CVPH_RS06010	PF02881	SRP54-type protein, helical bundle domain
CVPH_RS06010	PF00448	SRP54-type protein, GTPase domain
CVPH_RS06040	PF01329	Pterin 4 alpha carbinolamine dehydratase
CVPH_RS06045	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
CVPH_RS06045	PF03900	Porphobilinogen deaminase, C-terminal domain
CVPH_RS06060	PF00206	Lyase
CVPH_RS06060	PF14698	Argininosuccinate lyase C-terminal
CVPH_RS06065	PF02911	Formyl transferase, C-terminal domain
CVPH_RS06065	PF00551	Formyl transferase
CVPH_RS06090	PF00588	SpoU rRNA Methylase family
CVPH_RS06095	PF10431	C-terminal, D2-small domain, of ClpB protein 
CVPH_RS06095	PF07724	AAA domain (Cdc48 subfamily)
CVPH_RS06095	PF17871	AAA lid domain
CVPH_RS06095	PF02861	Clp amino terminal domain, pathogenicity island component
CVPH_RS06095	PF00004	ATPase family associated with various cellular activities (AAA)
CVPH_RS06115	PF02508	Rnf-Nqr subunit, membrane protein
CVPH_RS06125	PF05175	Methyltransferase small domain
CVPH_RS06125	PF17827	PrmC N-terminal domain
CVPH_RS06150	PF05683	Fumarase C-terminus
CVPH_RS06150	PF05681	Fumarate hydratase (Fumerase)
CVPH_RS06160	PF04085	rod shape-determining protein MreC
CVPH_RS06170	PF00905	Penicillin binding protein transpeptidase domain
CVPH_RS06170	PF03717	Penicillin-binding Protein dimerisation domain
CVPH_RS06180	PF01702	Queuine tRNA-ribosyltransferase
CVPH_RS06185	PF00664	ABC transporter transmembrane region
CVPH_RS06185	PF00005	ABC transporter
CVPH_RS06195	PF02631	RecX family
CVPH_RS06200	PF00154	recA bacterial DNA recombination protein
CVPH_RS06205	PF01872	RibD C-terminal domain
CVPH_RS06205	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
CVPH_RS06210	PF04127	DNA / pantothenate metabolism flavoprotein
CVPH_RS06210	PF02441	Flavoprotein
CVPH_RS06220	PF00753	Metallo-beta-lactamase superfamily
CVPH_RS06220	PF03772	Competence protein
CVPH_RS06230	PF14579	Helix-hairpin-helix motif
CVPH_RS06230	PF07733	Bacterial DNA polymerase III alpha NTPase domain
CVPH_RS06230	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
CVPH_RS06230	PF01336	OB-fold nucleic acid binding domain
CVPH_RS06230	PF02811	PHP domain
CVPH_RS06260	PF00425	chorismate binding enzyme
CVPH_RS06260	PF04715	Anthranilate synthase component I, N terminal region
CVPH_RS06265	PF04983	RNA polymerase Rpb1, domain 3
CVPH_RS06265	PF04997	RNA polymerase Rpb1, domain 1
CVPH_RS06265	PF04998	RNA polymerase Rpb1, domain 5
CVPH_RS06265	PF00623	RNA polymerase Rpb1, domain 2
CVPH_RS06265	PF05000	RNA polymerase Rpb1, domain 4
CVPH_RS06270	PF04560	RNA polymerase Rpb2, domain 7
CVPH_RS06270	PF10385	RNA polymerase beta subunit external 1 domain
CVPH_RS06270	PF04565	RNA polymerase Rpb2, domain 3
CVPH_RS06270	PF04563	RNA polymerase beta subunit
CVPH_RS06270	PF00562	RNA polymerase Rpb2, domain 6
CVPH_RS06270	PF04561	RNA polymerase Rpb2, domain 2
CVPH_RS06275	PF16320	Ribosomal protein L7/L12 dimerisation domain
CVPH_RS06275	PF00542	Ribosomal protein L7/L12 C-terminal domain
CVPH_RS06280	PF00466	Ribosomal protein L10
CVPH_RS06285	PF00687	Ribosomal protein L1p/L10e family
CVPH_RS06290	PF03946	Ribosomal protein L11, N-terminal domain
CVPH_RS06290	PF00298	Ribosomal protein L11, RNA binding domain
CVPH_RS06295	PF00467	KOW motif
CVPH_RS06295	PF02357	Transcription termination factor nusG
CVPH_RS06300	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
CVPH_RS06310	PF03143	Elongation factor Tu C-terminal domain
CVPH_RS06310	PF03144	Elongation factor Tu domain 2
CVPH_RS06310	PF00009	Elongation factor Tu GTP binding domain
CVPH_RS06330	PF00390	Malic enzyme, N-terminal domain
CVPH_RS06330	PF03949	Malic enzyme, NAD binding domain
CVPH_RS06350	PF02347	Glycine cleavage system P-protein
CVPH_RS06355	PF01230	HIT domain
CVPH_RS06400	PF00881	Nitroreductase family
CVPH_RS06430	PF00578	AhpC/TSA family
CVPH_RS06445	PF03795	YCII-related domain
CVPH_RS06455	PF05173	Dihydrodipicolinate reductase, C-terminus
CVPH_RS06455	PF01113	Dihydrodipicolinate reductase, N-terminus
CVPH_RS06495	PF00793	DAHP synthetase I family
CVPH_RS06500	PF00218	Indole-3-glycerol phosphate synthase
CVPH_RS06505	PF02566	OsmC-like protein
CVPH_RS06525	PF05690	Thiazole biosynthesis protein ThiG
CVPH_RS06555	PF00155	Aminotransferase class I and II
CVPH_RS06565	PF00731	AIR carboxylase
CVPH_RS06570	PF17769	Phosphoribosylaminoimidazole carboxylase C-terminal domain
CVPH_RS06570	PF02222	ATP-grasp domain
CVPH_RS06580	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
CVPH_RS06580	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
CVPH_RS06585	PF02348	Cytidylyltransferase
CVPH_RS06590	PF03966	Trm112p-like protein
CVPH_RS06595	PF02606	Tetraacyldisaccharide-1-P 4'-kinase
CVPH_RS06610	PF12704	MacB-like periplasmic core domain
CVPH_RS06610	PF02687	FtsX-like permease family
CVPH_RS06615	PF00005	ABC transporter
CVPH_RS06635	PF13193	AMP-binding enzyme C-terminal domain
CVPH_RS06635	PF00501	AMP-binding enzyme
CVPH_RS06640	PF13193	AMP-binding enzyme C-terminal domain
CVPH_RS06640	PF00501	AMP-binding enzyme
CVPH_RS06645	PF02261	Aspartate decarboxylase
CVPH_RS06650	PF03977	Na+-transporting oxaloacetate decarboxylase beta subunit
CVPH_RS06655	PF00364	Biotin-requiring enzyme
CVPH_RS06655	PF02436	Conserved carboxylase domain
CVPH_RS06655	PF00682	HMGL-like
CVPH_RS06670	PF01176	Translation initiation factor 1A / IF-1
CVPH_RS06675	PF02219	Methylenetetrahydrofolate reductase
CVPH_RS06695	PF01699	Sodium/calcium exchanger protein
CVPH_RS06700	PF02367	Threonylcarbamoyl adenosine biosynthesis protein TsaE
CVPH_RS06705	PF01520	N-acetylmuramoyl-L-alanine amidase
CVPH_RS06715	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
CVPH_RS06715	PF07685	CobB/CobQ-like glutamine amidotransferase domain
CVPH_RS06725	PF13247	4Fe-4S dicluster domain
CVPH_RS06735	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CVPH_RS06735	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
CVPH_RS06750	PF04358	DsrC like protein
CVPH_RS06755	PF04077	DsrH like protein
CVPH_RS06760	PF02635	DsrE/DsrF-like family
CVPH_RS06765	PF02635	DsrE/DsrF-like family
CVPH_RS06770	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
CVPH_RS06770	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
CVPH_RS06775	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
CVPH_RS06775	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
CVPH_RS06780	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CVPH_RS06780	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
CVPH_RS06785	PF01245	Ribosomal protein L19
CVPH_RS06790	PF00589	Phage integrase family
CVPH_RS06790	PF02899	Phage integrase, N-terminal SAM-like domain
CVPH_RS06810	PF00483	Nucleotidyl transferase
CVPH_RS06815	PF01272	Transcription elongation factor, GreA/GreB, C-term
CVPH_RS06815	PF03449	Transcription elongation factor, N-terminal
CVPH_RS06820	PF02142	MGS-like domain
CVPH_RS06820	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
CVPH_RS06820	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CVPH_RS06825	PF04333	MlaA lipoprotein
CVPH_RS06830	PF00117	Glutamine amidotransferase class-I
CVPH_RS06830	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
CVPH_RS06875	PF01411	tRNA synthetases class II (A)
CVPH_RS06875	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
CVPH_RS06875	PF02272	DHHA1 domain
CVPH_RS06880	PF01300	Telomere recombination
CVPH_RS06890	PF01380	SIS domain
CVPH_RS06895	PF00342	Phosphoglucose isomerase
CVPH_RS06900	PF00483	Nucleotidyl transferase
CVPH_RS06935	PF13439	Glycosyltransferase Family 4
CVPH_RS06935	PF00534	Glycosyl transferases group 1
CVPH_RS06950	PF03950	tRNA synthetases class I (E and Q), anti-codon binding domain
CVPH_RS06950	PF00749	tRNA synthetases class I (E and Q), catalytic domain
CVPH_RS06980	PF00884	Sulfatase
CVPH_RS06980	PF08019	Phosphoethanolamine transferase EptA/EptB
CVPH_RS06990	PF01975	Survival protein SurE
CVPH_RS06995	PF07724	AAA domain (Cdc48 subfamily)
CVPH_RS06995	PF17871	AAA lid domain
CVPH_RS06995	PF00004	ATPase family associated with various cellular activities (AAA)
CVPH_RS06995	PF02861	Clp amino terminal domain, pathogenicity island component
CVPH_RS06995	PF10431	C-terminal, D2-small domain, of ClpB protein 
CVPH_RS07000	PF02617	ATP-dependent Clp protease adaptor protein ClpS
CVPH_RS07005	PF03739	Lipopolysaccharide export system permease LptF/LptG
CVPH_RS07010	PF00117	Glutamine amidotransferase class-I
CVPH_RS07010	PF00958	GMP synthase C terminal domain
CVPH_RS07010	PF02540	NAD synthase
CVPH_RS07015	PF14437	MafB19-like deaminase
CVPH_RS07025	PF00698	Acyl transferase domain
CVPH_RS07030	PF01016	Ribosomal L27 protein
CVPH_RS07035	PF00829	Ribosomal prokaryotic L21 protein
CVPH_RS07040	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
CVPH_RS07045	PF00149	Calcineurin-like phosphoesterase
CVPH_RS07050	PF00773	RNB domain
CVPH_RS07055	PF01597	Glycine cleavage H-protein
CVPH_RS07060	PF08669	Glycine cleavage T-protein C-terminal barrel domain
CVPH_RS07060	PF01571	Aminomethyltransferase folate-binding domain
CVPH_RS07065	PF04279	Intracellular septation protein A 
CVPH_RS07080	PF01042	Endoribonuclease L-PSP
CVPH_RS07085	PF00270	DEAD/DEAH box helicase
CVPH_RS07085	PF17191	RecG wedge domain
CVPH_RS07085	PF00271	Helicase conserved C-terminal domain
CVPH_RS07090	PF04345	Chorismate lyase
CVPH_RS07095	PF13847	Methyltransferase domain
CVPH_RS07100	PF00117	Glutamine amidotransferase class-I
CVPH_RS07105	PF00581	Rhodanese-like domain
CVPH_RS07110	PF00462	Glutaredoxin
CVPH_RS07115	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
CVPH_RS07115	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
CVPH_RS07135	PF00380	Ribosomal protein S9/S16
CVPH_RS07140	PF00572	Ribosomal protein L13
CVPH_RS07145	PF08019	Phosphoethanolamine transferase EptA/EptB
CVPH_RS07145	PF00884	Sulfatase
CVPH_RS07160	PF00899	ThiF family
CVPH_RS07190	PF03880	DbpA RNA binding domain   
CVPH_RS07190	PF12343	Cold shock protein DEAD box A
CVPH_RS07190	PF00271	Helicase conserved C-terminal domain
CVPH_RS07190	PF00270	DEAD/DEAH box helicase
CVPH_RS07195	PF00916	Sulfate permease family
CVPH_RS07195	PF01740	STAS domain
CVPH_RS07200	PF00313	'Cold-shock' DNA-binding domain
CVPH_RS07240	PF08411	Exonuclease C-terminal
CVPH_RS07240	PF00929	Exonuclease
CVPH_RS07245	PF00730	HhH-GPD superfamily base excision DNA repair protein
CVPH_RS07245	PF00633	Helix-hairpin-helix motif
CVPH_RS07245	PF10576	Iron-sulfur binding domain of endonuclease III
CVPH_RS07255	PF03881	Fructosamine kinase
CVPH_RS07265	PF00117	Glutamine amidotransferase class-I
CVPH_RS07270	PF00475	Imidazoleglycerol-phosphate dehydratase
CVPH_RS07280	PF01118	Semialdehyde dehydrogenase, NAD binding domain
CVPH_RS07280	PF02774	Semialdehyde dehydrogenase, dimerisation domain
CVPH_RS07290	PF01784	NIF3 (NGG1p interacting factor 3)
CVPH_RS07295	PF00155	Aminotransferase class I and II
CVPH_RS07300	PF08543	Phosphomethylpyrimidine kinase
CVPH_RS07305	PF01323	DSBA-like thioredoxin domain
CVPH_RS07310	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
CVPH_RS07315	PF02152	Dihydroneopterin aldolase
CVPH_RS07320	PF02660	Glycerol-3-phosphate acyltransferase
CVPH_RS07325	PF03976	Polyphosphate kinase 2 (PPK2)
CVPH_RS07335	PF01061	ABC-2 type transporter
CVPH_RS07340	PF00005	ABC transporter
CVPH_RS07345	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
CVPH_RS07345	PF00364	Biotin-requiring enzyme
CVPH_RS07345	PF02817	e3 binding domain
CVPH_RS07350	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
CVPH_RS07350	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CVPH_RS07365	PF02910	Fumarate reductase flavoprotein C-term
CVPH_RS07365	PF00890	FAD binding domain
CVPH_RS07370	PF01327	Polypeptide deformylase
CVPH_RS07380	PF02954	Bacterial regulatory protein, Fis family
CVPH_RS07385	PF01808	AICARFT/IMPCHase bienzyme
CVPH_RS07385	PF02142	MGS-like domain
CVPH_RS07395	PF00271	Helicase conserved C-terminal domain
CVPH_RS07395	PF03880	DbpA RNA binding domain   
CVPH_RS07395	PF00270	DEAD/DEAH box helicase
CVPH_RS07405	PF01812	5-formyltetrahydrofolate cyclo-ligase family
CVPH_RS07435	PF01494	FAD binding domain
CVPH_RS07440	PF01523	Putative modulator of DNA gyrase
CVPH_RS07450	PF03471	Transporter associated domain
CVPH_RS07450	PF00571	CBS domain
CVPH_RS07455	PF03658	RnfH family Ubiquitin
CVPH_RS07460	PF00977	Histidine biosynthesis protein
CVPH_RS07465	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CVPH_RS07510	PF00814	Glycoprotease family
CVPH_RS07515	PF12399	Branched-chain amino acid ATP-binding cassette transporter
CVPH_RS07515	PF00005	ABC transporter
CVPH_RS07525	PF02237	Biotin protein ligase C terminal domain
CVPH_RS07525	PF03099	Biotin/lipoate A/B protein ligase family
CVPH_RS07525	PF08279	HTH domain
CVPH_RS07530	PF01219	Prokaryotic diacylglycerol kinase
CVPH_RS07540	PF01416	tRNA pseudouridine synthase
CVPH_RS07545	PF01717	Cobalamin-independent synthase, Catalytic domain
CVPH_RS07545	PF08267	Cobalamin-independent synthase, N-terminal domain
CVPH_RS07550	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CVPH_RS07550	PF03466	LysR substrate binding domain
CVPH_RS07555	PF03600	Citrate transporter
CVPH_RS07555	PF02080	TrkA-C domain
CVPH_RS07560	PF00484	Carbonic anhydrase
CVPH_RS07565	PF01782	RimM N-terminal domain
CVPH_RS07565	PF05239	PRC-barrel domain
CVPH_RS07570	PF00886	Ribosomal protein S16
CVPH_RS07575	PF00206	Lyase
CVPH_RS07575	PF08328	Adenylosuccinate lyase C-terminal
CVPH_RS07580	PF00330	Aconitase family (aconitate hydratase)
CVPH_RS07580	PF06434	Aconitate hydratase 2 N-terminus
CVPH_RS07580	PF11791	Aconitate B N-terminal domain
CVPH_RS07585	PF00471	Ribosomal protein L33
CVPH_RS07590	PF00830	Ribosomal L28 family
CVPH_RS07600	PF00589	Phage integrase family
CVPH_RS07600	PF02899	Phage integrase, N-terminal SAM-like domain
CVPH_RS07665	PF00072	Response regulator receiver domain
CVPH_RS07665	PF00196	Bacterial regulatory proteins, luxR family
CVPH_RS07670	PF09424	Yqey-like protein
CVPH_RS07675	PF01165	Ribosomal protein S21
CVPH_RS07680	PF01196	Ribosomal protein L17
CVPH_RS07685	PF01000	RNA polymerase Rpb3/RpoA insert domain
CVPH_RS07685	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
CVPH_RS07685	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
CVPH_RS07690	PF01479	S4 domain
CVPH_RS07690	PF00163	Ribosomal protein S4/S9 N-terminal domain
CVPH_RS07695	PF00411	Ribosomal protein S11
CVPH_RS07700	PF00416	Ribosomal protein S13/S18
CVPH_RS07705	PF00444	Ribosomal protein L36
CVPH_RS07710	PF00344	SecY translocase
CVPH_RS07715	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
CVPH_RS07720	PF00327	Ribosomal protein L30p/L7e
CVPH_RS07725	PF03719	Ribosomal protein S5, C-terminal domain
CVPH_RS07725	PF00333	Ribosomal protein S5, N-terminal domain
CVPH_RS07730	PF00861	Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
CVPH_RS07735	PF00347	Ribosomal protein L6
CVPH_RS07740	PF00410	Ribosomal protein S8
CVPH_RS07745	PF00253	Ribosomal protein S14p/S29e
CVPH_RS07750	PF00673	ribosomal L5P family C-terminus
CVPH_RS07750	PF00281	Ribosomal protein L5
CVPH_RS07755	PF17136	Ribosomal proteins 50S L24/mitochondrial 39S L24
CVPH_RS07760	PF00238	Ribosomal protein L14p/L23e
CVPH_RS07765	PF00366	Ribosomal protein S17
CVPH_RS07770	PF00831	Ribosomal L29 protein
CVPH_RS07775	PF00252	Ribosomal protein L16p/L10e
CVPH_RS07780	PF00189	Ribosomal protein S3, C-terminal domain
CVPH_RS07780	PF07650	KH domain
CVPH_RS07785	PF00237	Ribosomal protein L22p/L17e
CVPH_RS07790	PF00203	Ribosomal protein S19
CVPH_RS07795	PF00181	Ribosomal Proteins L2, RNA binding domain
CVPH_RS07795	PF03947	Ribosomal Proteins L2, C-terminal domain
CVPH_RS07800	PF00276	Ribosomal protein L23
CVPH_RS07805	PF00573	Ribosomal protein L4/L1 family
CVPH_RS07810	PF00297	Ribosomal protein L3
CVPH_RS07815	PF00338	Ribosomal protein S10p/S20e
CVPH_RS07820	PF03144	Elongation factor Tu domain 2
CVPH_RS07820	PF00009	Elongation factor Tu GTP binding domain
CVPH_RS07820	PF03143	Elongation factor Tu C-terminal domain
CVPH_RS07825	PF00009	Elongation factor Tu GTP binding domain
CVPH_RS07825	PF03144	Elongation factor Tu domain 2
CVPH_RS07825	PF03764	Elongation factor G, domain IV
CVPH_RS07825	PF00679	Elongation factor G C-terminus
CVPH_RS07825	PF14492	Elongation Factor G, domain II
CVPH_RS07830	PF00177	Ribosomal protein S7p/S5e
CVPH_RS07835	PF00164	Ribosomal protein S12/S23
CVPH_RS07840	PF01451	Low molecular weight phosphotyrosine protein phosphatase
CVPH_RS07845	PF01380	SIS domain
CVPH_RS07845	PF00571	CBS domain
CVPH_RS07860	PF02872	5'-nucleotidase, C-terminal domain
CVPH_RS07860	PF00149	Calcineurin-like phosphoesterase
CVPH_RS07865	PF08245	Mur ligase middle domain
CVPH_RS07865	PF02875	Mur ligase family, glutamate ligase domain
CVPH_RS07865	PF01225	Mur ligase family, catalytic domain
CVPH_RS07880	PF01225	Mur ligase family, catalytic domain
CVPH_RS07880	PF02875	Mur ligase family, glutamate ligase domain
CVPH_RS07880	PF08245	Mur ligase middle domain
CVPH_RS07890	PF01066	CDP-alcohol phosphatidyltransferase
CVPH_RS07905	PF00764	Arginosuccinate synthase
CVPH_RS07915	PF03692	Putative zinc- or iron-chelating domain
CVPH_RS07925	PF00152	tRNA synthetases class II (D, K and N) 
CVPH_RS07930	PF01132	Elongation factor P (EF-P) OB domain
CVPH_RS07930	PF08207	Elongation factor P (EF-P) KOW-like domain
CVPH_RS07930	PF09285	Elongation factor P, C-terminal
CVPH_RS07950	PF08442	ATP-grasp domain
CVPH_RS07950	PF00549	CoA-ligase
CVPH_RS07955	PF00549	CoA-ligase
CVPH_RS07955	PF02629	CoA binding domain
CVPH_RS07980	PF04205	FMN-binding domain
CVPH_RS07985	PF03116	NQR2, RnfD, RnfE family
CVPH_RS07990	PF12838	4Fe-4S dicluster domain
CVPH_RS07990	PF13375	RnfC Barrel sandwich hybrid domain
CVPH_RS07990	PF10531	SLBB domain
CVPH_RS07990	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
CVPH_RS07995	PF04060	Putative Fe-S cluster
CVPH_RS08000	PF02508	Rnf-Nqr subunit, membrane protein
CVPH_RS08020	PF00589	Phage integrase family
CVPH_RS08020	PF13495	Phage integrase, N-terminal SAM-like domain
CVPH_RS08050	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
CVPH_RS08050	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
CVPH_RS08050	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
CVPH_RS08050	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
CVPH_RS08055	PF00809	Pterin binding enzyme
CVPH_RS08060	PF06480	FtsH Extracellular
CVPH_RS08060	PF17862	AAA+ lid domain
CVPH_RS08060	PF00004	ATPase family associated with various cellular activities (AAA)
CVPH_RS08060	PF01434	Peptidase family M41
CVPH_RS08075	PF00171	Aldehyde dehydrogenase family
CVPH_RS08080	PF00579	tRNA synthetases class I (W and Y)
CVPH_RS08095	PF00270	DEAD/DEAH box helicase
CVPH_RS08095	PF00271	Helicase conserved C-terminal domain
CVPH_RS08100	PF01722	BolA-like protein
CVPH_RS08105	PF01384	Phosphate transporter family
CVPH_RS08110	PF01865	Protein of unknown function DUF47
CVPH_RS08120	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
CVPH_RS08125	PF01171	PP-loop family
CVPH_RS08125	PF09179	TilS substrate binding domain
CVPH_RS08125	PF11734	TilS substrate C-terminal domain
CVPH_RS08130	PF02130	Uncharacterized protein family UPF0054
CVPH_RS08135	PF18074	Primosomal protein N C-terminal domain
CVPH_RS08135	PF18319	PriA DNA helicase Cys-rich region (CRR) domain
CVPH_RS08135	PF00270	DEAD/DEAH box helicase
CVPH_RS08135	PF17764	3′ DNA-binding domain (3′BD)
CVPH_RS08135	PF00271	Helicase conserved C-terminal domain
CVPH_RS08150	PF00202	Aminotransferase class-III
CVPH_RS08155	PF13419	Haloacid dehalogenase-like hydrolase
CVPH_RS08160	PF03807	NADP oxidoreductase coenzyme F420-dependent
CVPH_RS08160	PF14748	Pyrroline-5-carboxylate reductase dimerisation
CVPH_RS08175	PF05195	Aminopeptidase P, N-terminal domain
CVPH_RS08175	PF00557	Metallopeptidase family M24
CVPH_RS08180	PF00591	Glycosyl transferase family, a/b domain
CVPH_RS08180	PF02885	Glycosyl transferase family, helical bundle domain
CVPH_RS08185	PF00929	Exonuclease
CVPH_RS08190	PF00288	GHMP kinases N terminal domain
CVPH_RS08200	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
CVPH_RS08200	PF14572	Phosphoribosyl synthetase-associated domain
CVPH_RS08205	PF03979	Sigma-70 factor, region 1.1
CVPH_RS08205	PF04539	Sigma-70 region 3
CVPH_RS08205	PF04545	Sigma-70, region 4
CVPH_RS08205	PF04542	Sigma-70 region 2 
CVPH_RS08205	PF00140	Sigma-70 factor, region 1.2
CVPH_RS08205	PF04546	Sigma-70, non-essential region
CVPH_RS08215	PF00459	Inositol monophosphatase family
CVPH_RS08220	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
CVPH_RS08220	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
CVPH_RS08225	PF02684	Lipid-A-disaccharide synthetase
CVPH_RS08235	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
CVPH_RS08235	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
CVPH_RS08290	PF00795	Carbon-nitrogen hydrolase
CVPH_RS08295	PF00109	Beta-ketoacyl synthase, N-terminal domain
CVPH_RS08295	PF02801	Beta-ketoacyl synthase, C-terminal domain
CVPH_RS08310	PF00293	NUDIX domain
CVPH_RS08325	PF00581	Rhodanese-like domain
CVPH_RS08325	PF00753	Metallo-beta-lactamase superfamily
CVPH_RS08420	PF17482	Phage tail sheath C-terminal domain
CVPH_RS08420	PF04984	Phage tail sheath protein subtilisin-like domain
CVPH_RS08455	PF00753	Metallo-beta-lactamase superfamily
CVPH_RS08455	PF16123	Hydroxyacylglutathione hydrolase C-terminus
CVPH_RS08460	PF16123	Hydroxyacylglutathione hydrolase C-terminus
CVPH_RS08460	PF00753	Metallo-beta-lactamase superfamily
CVPH_RS08465	PF00462	Glutaredoxin
CVPH_RS08470	PF00180	Isocitrate/isopropylmalate dehydrogenase
CVPH_RS08475	PF00301	Rubredoxin
CVPH_RS08480	PF00578	AhpC/TSA family
CVPH_RS08480	PF10417	C-terminal domain of 1-Cys peroxiredoxin
CVPH_RS08485	PF01406	tRNA synthetases class I (C) catalytic domain
CVPH_RS08485	PF09190	DALR domain
CVPH_RS08550	PF00365	Phosphofructokinase
CVPH_RS08555	PF05191	Adenylate kinase, active site lid
CVPH_RS08565	PF03030	Inorganic H+ pyrophosphatase
CVPH_RS08575	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
CVPH_RS08585	PF00890	FAD binding domain
CVPH_RS08590	PF12139	Adenosine-5'-phosphosulfate reductase beta subunit
CVPH_RS08590	PF13187	4Fe-4S dicluster domain
CVPH_RS08600	PF01747	ATP-sulfurylase
CVPH_RS08600	PF14306	PUA-like domain
CVPH_RS08615	PF02581	Thiamine monophosphate synthase
CVPH_RS08625	PF00580	UvrD/REP helicase N-terminal domain
CVPH_RS08625	PF12705	PD-(D/E)XK nuclease superfamily
CVPH_RS08625	PF13361	UvrD-like helicase C-terminal domain
CVPH_RS08630	PF00750	tRNA synthetases class I (R)
CVPH_RS08630	PF05746	DALR anticodon binding domain
CVPH_RS08630	PF03485	Arginyl tRNA synthetase N terminal domain
CVPH_RS08635	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
CVPH_RS08635	PF01612	3'-5' exonuclease
CVPH_RS08635	PF01367	5'-3' exonuclease, C-terminal SAM fold
CVPH_RS08635	PF00476	DNA polymerase family A
CVPH_RS08640	PF00005	ABC transporter
CVPH_RS08680	PF11614	IG-like fold at C-terminal of FixG, putative oxidoreductase
CVPH_RS08680	PF12801	4Fe-4S binding domain
CVPH_RS08680	PF13746	4Fe-4S dicluster domain
CVPH_RS08685	PF00132	Bacterial transferase hexapeptide (six repeats)
CVPH_RS08685	PF14805	Tetrahydrodipicolinate N-succinyltransferase N-terminal
CVPH_RS08685	PF14602	Hexapeptide repeat of succinyl-transferase
CVPH_RS08695	PF01040	UbiA prenyltransferase family
CVPH_RS08700	PF00849	RNA pseudouridylate synthase
CVPH_RS08700	PF01479	S4 domain
CVPH_RS08705	PF01026	TatD related DNase
CVPH_RS08715	PF02527	rRNA small subunit methyltransferase G
CVPH_RS08720	PF01134	Glucose inhibited division protein A
CVPH_RS08720	PF13932	GidA associated domain
CVPH_RS08725	PF01116	Fructose-bisphosphate aldolase class-II
CVPH_RS08730	PF02887	Pyruvate kinase, alpha/beta domain
CVPH_RS08730	PF00224	Pyruvate kinase, barrel domain
CVPH_RS08735	PF00162	Phosphoglycerate kinase
CVPH_RS08750	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
CVPH_RS08750	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CVPH_RS08755	PF02780	Transketolase, C-terminal domain
CVPH_RS08755	PF02779	Transketolase, pyrimidine binding domain
CVPH_RS08755	PF00456	Transketolase, thiamine diphosphate binding domain
CVPH_RS08765	PF01121	Dephospho-CoA kinase
CVPH_RS08775	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
CVPH_RS08835	PF02033	Ribosome-binding factor A
CVPH_RS08840	PF11987	Translation-initiation factor 2
CVPH_RS08840	PF04760	Translation initiation factor IF-2, N-terminal region
CVPH_RS08840	PF00009	Elongation factor Tu GTP binding domain
CVPH_RS08845	PF13184	NusA-like KH domain
CVPH_RS08845	PF00575	S1 RNA binding domain
CVPH_RS08845	PF08529	NusA N-terminal domain
CVPH_RS08850	PF02576	RimP N-terminal domain
CVPH_RS08850	PF17384	RimP C-terminal SH3 domain
CVPH_RS08860	PF02955	Prokaryotic glutathione synthetase, ATP-grasp domain
CVPH_RS08860	PF02951	Prokaryotic glutathione synthetase, N-terminal domain
CVPH_RS08865	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
CVPH_RS08870	PF12002	MgsA AAA+ ATPase C terminal
CVPH_RS08870	PF16193	AAA C-terminal domain
CVPH_RS08870	PF00004	ATPase family associated with various cellular activities (AAA)
CVPH_RS08875	PF02424	ApbE family
CVPH_RS08880	PF13406	Transglycosylase SLT domain
CVPH_RS08885	PF03652	Holliday junction resolvase
CVPH_RS08890	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
CVPH_RS08890	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
CVPH_RS08905	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CVPH_RS08910	PF01580	FtsK/SpoIIIE family
CVPH_RS08910	PF17854	FtsK alpha domain
CVPH_RS08910	PF13491	4TM region of DNA translocase FtsK/SpoIIIE
CVPH_RS08910	PF09397	Ftsk gamma domain
CVPH_RS08935	PF01478	Type IV leader peptidase family
CVPH_RS08935	PF06750	Bacterial Peptidase A24 N-terminal domain
CVPH_RS08940	PF01478	Type IV leader peptidase family
CVPH_RS08940	PF06750	Bacterial Peptidase A24 N-terminal domain
CVPH_RS09010	PF00437	Type II/IV secretion system protein
CVPH_RS09010	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
CVPH_RS09015	PF00437	Type II/IV secretion system protein
CVPH_RS09030	PF00156	Phosphoribosyl transferase domain
CVPH_RS09035	PF03372	Endonuclease/Exonuclease/phosphatase family
CVPH_RS09040	PF02390	Putative methyltransferase 
CVPH_RS09045	PF04186	FxsA cytoplasmic membrane protein 
CVPH_RS09050	PF02875	Mur ligase family, glutamate ligase domain
CVPH_RS09050	PF08245	Mur ligase middle domain
CVPH_RS09060	PF00156	Phosphoribosyl transferase domain
CVPH_RS09065	PF01053	Cys/Met metabolism PLP-dependent enzyme
CVPH_RS09070	PF07977	FabA-like domain
CVPH_RS09075	PF00109	Beta-ketoacyl synthase, N-terminal domain
CVPH_RS09075	PF02801	Beta-ketoacyl synthase, C-terminal domain
CVPH_RS09080	PF02355	Protein export membrane protein
CVPH_RS09080	PF07549	SecD/SecF GG Motif
CVPH_RS09085	PF13721	SecD export protein N-terminal TM region
CVPH_RS09085	PF07549	SecD/SecF GG Motif
CVPH_RS09085	PF02355	Protein export membrane protein
CVPH_RS09090	PF02699	Preprotein translocase subunit
CVPH_RS09095	PF02403	Seryl-tRNA synthetase N-terminal domain
CVPH_RS09095	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
CVPH_RS09100	PF00581	Rhodanese-like domain
CVPH_RS09110	PF00085	Thioredoxin
CVPH_RS09145	PF00072	Response regulator receiver domain
CVPH_RS09145	PF00196	Bacterial regulatory proteins, luxR family
CVPH_RS09150	PF00672	HAMP domain
CVPH_RS09150	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CVPH_RS09150	PF13675	Type IV pili methyl-accepting chemotaxis transducer N-term
CVPH_RS09150	PF07730	Histidine kinase
CVPH_RS09155	PF12631	MnmE helical domain
CVPH_RS09155	PF01926	50S ribosome-binding GTPase
CVPH_RS09155	PF10396	GTP-binding protein TrmE N-terminus
CVPH_RS09160	PF04262	Glutamate-cysteine ligase 
CVPH_RS09165	PF02581	Thiamine monophosphate synthase
CVPH_RS09215	PF03883	Peroxide stress protein YaaA
CVPH_RS09220	PF01645	Conserved region in glutamate synthase
CVPH_RS09220	PF01493	GXGXG motif
CVPH_RS09220	PF04898	Glutamate synthase central domain
CVPH_RS09220	PF00310	Glutamine amidotransferases class-II
CVPH_RS09230	PF00186	Dihydrofolate reductase
CVPH_RS09235	PF02545	Maf-like protein
CVPH_RS09240	PF03461	TRCF domain
CVPH_RS09240	PF00270	DEAD/DEAH box helicase
CVPH_RS09240	PF17757	UvrB interaction domain
CVPH_RS09240	PF00271	Helicase conserved C-terminal domain
CVPH_RS09240	PF02559	CarD-like/TRCF domain
CVPH_RS09245	PF00294	pfkB family carbohydrate kinase
CVPH_RS09250	PF02401	LytB protein
CVPH_RS09255	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
CVPH_RS09260	PF01039	Carboxyl transferase domain
CVPH_RS09260	PF17848	Acetyl-coA carboxylase zinc finger domain
CVPH_RS09265	PF00290	Tryptophan synthase alpha chain
CVPH_RS09270	PF01208	Uroporphyrinogen decarboxylase (URO-D)
CVPH_RS09275	PF01197	Ribosomal protein L31
CVPH_RS09280	PF00403	Heavy-metal-associated domain
CVPH_RS09290	PF00132	Bacterial transferase hexapeptide (six repeats)
CVPH_RS09290	PF12804	MobA-like NTP transferase domain
CVPH_RS09330	PF00291	Pyridoxal-phosphate dependent enzyme
CVPH_RS09335	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
CVPH_RS09360	PF04556	DpnII restriction endonuclease
CVPH_RS09370	PF04556	DpnII restriction endonuclease
CVPH_RS09385	PF01131	DNA topoisomerase
CVPH_RS09385	PF01751	Toprim domain
CVPH_RS09385	PF13368	Topoisomerase C-terminal repeat
CVPH_RS09405	PF00468	Ribosomal protein L34
CVPH_RS09410	PF00825	Ribonuclease P
CVPH_RS09415	PF01809	Putative membrane protein insertion efficiency factor
CVPH_RS09420	PF02096	60Kd inner membrane protein
CVPH_RS09420	PF14849	YidC periplasmic domain
CVPH_RS09425	PF01888	CbiD
CVPH_RS09430	PF01510	N-acetylmuramoyl-L-alanine amidase
CVPH_RS09445	PF00401	ATP synthase, Delta/Epsilon chain, long alpha-helix domain
CVPH_RS09445	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
CVPH_RS09450	PF02874	ATP synthase alpha/beta family, beta-barrel domain
CVPH_RS09450	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
CVPH_RS09455	PF00231	ATP synthase
CVPH_RS09460	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
CVPH_RS09460	PF00306	ATP synthase alpha/beta chain, C terminal domain
CVPH_RS09460	PF02874	ATP synthase alpha/beta family, beta-barrel domain
CVPH_RS09465	PF00213	ATP synthase delta (OSCP) subunit
CVPH_RS09470	PF00430	ATP synthase B/B' CF(0)
CVPH_RS09475	PF00137	ATP synthase subunit C
CVPH_RS09480	PF00119	ATP synthase A chain
CVPH_RS09490	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CVPH_RS09500	PF01513	ATP-NAD kinase
CVPH_RS09505	PF01025	GrpE
CVPH_RS09645	PF02683	Cytochrome C biogenesis protein transmembrane region
CVPH_RS09645	PF11412	Disulphide bond corrector protein DsbC
CVPH_RS09650	PF01220	Dehydroquinase class II
CVPH_RS09655	PF00364	Biotin-requiring enzyme
CVPH_RS09660	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
CVPH_RS09660	PF00289	Biotin carboxylase, N-terminal domain
CVPH_RS09660	PF02785	Biotin carboxylase C-terminal domain
CVPH_RS09665	PF02774	Semialdehyde dehydrogenase, dimerisation domain
CVPH_RS09665	PF01118	Semialdehyde dehydrogenase, NAD binding domain
CVPH_RS09670	PF01521	Iron-sulphur cluster biosynthesis
CVPH_RS09675	PF00285	Citrate synthase, C-terminal domain
CVPH_RS09680	PF01209	ubiE/COQ5 methyltransferase family
CVPH_RS09690	PF03109	ABC1 family
CVPH_RS09695	PF14693	Ribosomal protein TL5, C-terminal domain
CVPH_RS09695	PF01386	Ribosomal L25p family
CVPH_RS09700	PF01195	Peptidyl-tRNA hydrolase
CVPH_RS09705	PF06071	Protein of unknown function (DUF933)
CVPH_RS09705	PF01926	50S ribosome-binding GTPase
CVPH_RS09710	PF01676	Metalloenzyme superfamily
CVPH_RS09710	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
CVPH_RS09715	PF00834	Ribulose-phosphate 3 epimerase family
CVPH_RS09730	PF00318	Ribosomal protein S2
CVPH_RS09735	PF00889	Elongation factor TS
CVPH_RS09765	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CVPH_RS09765	PF00989	PAS fold
CVPH_RS09765	PF00512	His Kinase A (phospho-acceptor) domain
CVPH_RS09765	PF11808	Phosphate regulon sensor protein PhoR
CVPH_RS09770	PF01895	PhoU domain
CVPH_RS09835	PF03840	Preprotein translocase SecG subunit
CVPH_RS09840	PF00121	Triosephosphate isomerase
