AM1_RS00060	SM00116	Domain in cystathionine beta-synthase and other proteins.
AM1_RS00090	SM00052	Putative diguanylate phosphodiesterase
AM1_RS00090	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM1_RS00090	SM00091	PAS domain
AM1_RS00090	SM00267	diguanylate cyclase
AM1_RS00090	SM00448	cheY-homologous receiver domain
AM1_RS00095	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM1_RS00095	SM00387	Histidine kinase-like ATPases
AM1_RS00095	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS00100	SM00448	cheY-homologous receiver domain
AM1_RS00110	SM00670	Large family of predicted nucleotide-binding domains
AM1_RS00120	SM00320	WD40 repeats
AM1_RS00125	SM00028	Tetratricopeptide repeats
AM1_RS00155	SM00421	helix_turn_helix, Lux Regulon
AM1_RS00185	SM00732	Likely ribonuclease with RNase H fold.
AM1_RS00205	SM00567	E-Z type HEAT repeats
AM1_RS00230	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS00250	SM00287	Bacterial SH3 domain homologues
AM1_RS00265	SM00364	Leucine-rich repeats, bacterial type
AM1_RS00265	SM00369	Leucine-rich repeats, typical (most populated) subfamily
AM1_RS00320	SM00838	Elongation factor G C-terminus
AM1_RS00325	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS00325	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM1_RS00325	SM00091	PAS domain
AM1_RS00325	SM00387	Histidine kinase-like ATPases
AM1_RS00325	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS00325	SM00448	cheY-homologous receiver domain
AM1_RS00330	SM00267	diguanylate cyclase
AM1_RS00330	SM00448	cheY-homologous receiver domain
AM1_RS00360	SM00912	haemagglutination activity domain
AM1_RS00425	SM01057	Eukaryotic-type carbonic anhydrase
AM1_RS00460	SM00028	Tetratricopeptide repeats
AM1_RS00470	SM00710	Parallel beta-helix repeats
AM1_RS00580	SM00487	DEAD-like helicases superfamily
AM1_RS00580	SM00490	helicase superfamily c-terminal domain
AM1_RS00605	SM00382	ATPases associated with a variety of cellular activities
AM1_RS00625	SM00642	Alpha-amylase domain
AM1_RS00725	SM00320	WD40 repeats
AM1_RS00755	SM00320	WD40 repeats
AM1_RS00765	SM00382	ATPases associated with a variety of cellular activities
AM1_RS00790	SM00880	AM1_RS00790
AM1_RS00795	SM01321	AM1_RS00795
AM1_RS00800	SM00271	DnaJ molecular chaperone homology domain
AM1_RS00845	SM00530	Helix-turn-helix XRE-family like proteins 
AM1_RS00850	SM00267	diguanylate cyclase
AM1_RS00905	SM00822	AM1_RS00905
AM1_RS00910	SM00100	Cyclic nucleotide-monophosphate binding domain
AM1_RS00935	SM00052	Putative diguanylate phosphodiesterase
AM1_RS00945	SM00387	Histidine kinase-like ATPases
AM1_RS00945	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS00945	SM00448	cheY-homologous receiver domain
AM1_RS00965	SM00091	PAS domain
AM1_RS00965	SM00240	Forkhead associated domain
AM1_RS00965	SM00387	Histidine kinase-like ATPases
AM1_RS00965	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS00980	SM00240	Forkhead associated domain
AM1_RS01045	SM00382	ATPases associated with a variety of cellular activities
AM1_RS01110	SM00028	Tetratricopeptide repeats
AM1_RS01140	SM00382	ATPases associated with a variety of cellular activities
AM1_RS01160	SM00421	helix_turn_helix, Lux Regulon
AM1_RS01160	SM00448	cheY-homologous receiver domain
AM1_RS01165	SM00387	Histidine kinase-like ATPases
AM1_RS01165	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS01205	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS01230	SM00487	DEAD-like helicases superfamily
AM1_RS01230	SM00490	helicase superfamily c-terminal domain
AM1_RS01240	SM00448	cheY-homologous receiver domain
AM1_RS01255	SM00507	HNH nucleases
AM1_RS01380	SM00506	Appr-1"-p processing enzyme
AM1_RS01450	SM01230	AM1_RS01450
AM1_RS01670	SM00382	ATPases associated with a variety of cellular activities
AM1_RS01700	SM00448	cheY-homologous receiver domain
AM1_RS01705	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM1_RS01705	SM00091	PAS domain
AM1_RS01705	SM00387	Histidine kinase-like ATPases
AM1_RS01705	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS01735	SM00382	ATPases associated with a variety of cellular activities
AM1_RS01735	SM01086	C-terminal, D2-small domain, of ClpB protein
AM1_RS01775	SM00477	DNA/RNA non-specific endonuclease
AM1_RS01775	SM00892	DNA/RNA non-specific endonuclease
AM1_RS01800	SM00271	DnaJ molecular chaperone homology domain
AM1_RS01810	SM00382	ATPases associated with a variety of cellular activities
AM1_RS01830	SM00271	DnaJ molecular chaperone homology domain
AM1_RS01900	SM00881	CoA binding domain
AM1_RS01950	SM00450	Rhodanese Homology Domain
AM1_RS02000	SM00248	ankyrin repeats
AM1_RS02010	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AM1_RS02030	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM1_RS02040	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM1_RS02040	SM00091	PAS domain
AM1_RS02040	SM00387	Histidine kinase-like ATPases
AM1_RS02040	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS02040	SM00448	cheY-homologous receiver domain
AM1_RS02060	SM00899	AM1_RS02060
AM1_RS02080	SM00100	Cyclic nucleotide-monophosphate binding domain
AM1_RS02080	SM00419	helix_turn_helix, cAMP Regulatory protein
AM1_RS02165	SM00382	ATPases associated with a variety of cellular activities
AM1_RS02225	SM00232	JAB/MPN domain
AM1_RS02230	SM00450	Rhodanese Homology Domain
AM1_RS02235	SM00421	helix_turn_helix, Lux Regulon
AM1_RS02235	SM00448	cheY-homologous receiver domain
AM1_RS02240	SM00387	Histidine kinase-like ATPases
AM1_RS02265	SM00052	Putative diguanylate phosphodiesterase
AM1_RS02265	SM00267	diguanylate cyclase
AM1_RS02265	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM1_RS02320	SM00327	von Willebrand factor (vWF) type A domain
AM1_RS02320	SM00382	ATPases associated with a variety of cellular activities
AM1_RS02380	SM00267	diguanylate cyclase
AM1_RS02380	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM1_RS02385	SM00052	Putative diguanylate phosphodiesterase
AM1_RS02385	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS02385	SM00267	diguanylate cyclase
AM1_RS02395	SM00155	Phospholipase D. Active site motifs.
AM1_RS02395	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AM1_RS02460	SM00267	diguanylate cyclase
AM1_RS02460	SM00448	cheY-homologous receiver domain
AM1_RS02475	SM00360	RNA recognition motif
AM1_RS02505	SM01266	AM1_RS02505
AM1_RS02530	SM00052	Putative diguanylate phosphodiesterase
AM1_RS02530	SM00091	PAS domain
AM1_RS02530	SM00240	Forkhead associated domain
AM1_RS02530	SM00267	diguanylate cyclase
AM1_RS02590	SM00226	Low molecular weight phosphatase family
AM1_RS02600	SM00422	helix_turn_helix, mercury resistance
AM1_RS02620	SM00028	Tetratricopeptide repeats
AM1_RS02625	SM00838	Elongation factor G C-terminus
AM1_RS02625	SM00889	Elongation factor G, domain IV
AM1_RS02655	SM00028	Tetratricopeptide repeats
AM1_RS02665	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AM1_RS02730	SM00642	Alpha-amylase domain
AM1_RS02795	SM00387	Histidine kinase-like ATPases
AM1_RS02795	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS02795	SM00448	cheY-homologous receiver domain
AM1_RS02860	SM00382	ATPases associated with a variety of cellular activities
AM1_RS02865	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AM1_RS02865	SM01232	AM1_RS02865
AM1_RS02895	SM00877	AM1_RS02895
AM1_RS02900	SM00877	AM1_RS02900
AM1_RS02905	SM00382	ATPases associated with a variety of cellular activities
AM1_RS02930	SM00487	DEAD-like helicases superfamily
AM1_RS02930	SM00490	helicase superfamily c-terminal domain
AM1_RS02945	SM00028	Tetratricopeptide repeats
AM1_RS02945	SM00271	DnaJ molecular chaperone homology domain
AM1_RS02950	SM00028	Tetratricopeptide repeats
AM1_RS02970	SM00487	DEAD-like helicases superfamily
AM1_RS03065	SM00861	Transketolase, pyrimidine binding domain
AM1_RS03095	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
AM1_RS03095	SM01080	AM1_RS03095
AM1_RS03110	SM00917	LeuA allosteric (dimerisation) domain
AM1_RS03145	SM00155	Phospholipase D. Active site motifs.
AM1_RS03150	SM00052	Putative diguanylate phosphodiesterase
AM1_RS03150	SM00100	Cyclic nucleotide-monophosphate binding domain
AM1_RS03160	SM00320	WD40 repeats
AM1_RS03200	SM00823	Phosphopantetheine attachment site
AM1_RS03200	SM01294	AM1_RS03200
AM1_RS03210	SM00855	Phosphoglycerate mutase family
AM1_RS03215	SM00822	AM1_RS03215
AM1_RS03290	SM01234	AM1_RS03290
AM1_RS03305	SM00244	prohibitin homologues
AM1_RS03310	SM00244	prohibitin homologues
AM1_RS03415	SM00382	ATPases associated with a variety of cellular activities
AM1_RS03530	SM00448	cheY-homologous receiver domain
AM1_RS03530	SM00862	Transcriptional regulatory protein, C terminal
AM1_RS03585	SM00864	Tubulin/FtsZ family, GTPase domain
AM1_RS03585	SM00865	Tubulin/FtsZ family, C-terminal domain
AM1_RS03590	SM01400	AM1_RS03590
AM1_RS03600	SM00382	ATPases associated with a variety of cellular activities
AM1_RS03605	SM00419	helix_turn_helix, cAMP Regulatory protein
AM1_RS03670	SM00271	DnaJ molecular chaperone homology domain
AM1_RS03680	SM00448	cheY-homologous receiver domain
AM1_RS03685	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS03685	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM1_RS03685	SM00091	PAS domain
AM1_RS03685	SM00387	Histidine kinase-like ATPases
AM1_RS03685	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS03695	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
AM1_RS03730	SM00930	AM1_RS03730
AM1_RS03805	SM01001	AIR carboxylase
AM1_RS03810	SM01005	Alanine racemase, C-terminal domain
AM1_RS03820	SM00382	ATPases associated with a variety of cellular activities
AM1_RS03825	SM00382	ATPases associated with a variety of cellular activities
AM1_RS03885	SM00988	UreE urease accessory protein, N-terminal domain
AM1_RS03940	SM00857	Resolvase, N terminal domain
AM1_RS03990	SM01329	AM1_RS03990
AM1_RS04030	SM00448	cheY-homologous receiver domain
AM1_RS04035	SM00448	cheY-homologous receiver domain
AM1_RS04040	SM00260	Two component signalling adaptor domain
AM1_RS04045	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM1_RS04045	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM1_RS04050	SM00073	Histidine Phosphotransfer domain
AM1_RS04050	SM00260	Two component signalling adaptor domain
AM1_RS04050	SM00387	Histidine kinase-like ATPases
AM1_RS04050	SM00448	cheY-homologous receiver domain
AM1_RS04050	SM01231	AM1_RS04050
AM1_RS04055	SM00260	Two component signalling adaptor domain
AM1_RS04120	SM00322	K homology RNA-binding domain
AM1_RS04160	SM00845	GatB domain
AM1_RS04190	SM00116	Domain in cystathionine beta-synthase and other proteins.
AM1_RS04205	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AM1_RS04215	SM00831	Cation transporter/ATPase, N-terminus
AM1_RS04220	SM00100	Cyclic nucleotide-monophosphate binding domain
AM1_RS04250	SM00387	Histidine kinase-like ATPases
AM1_RS04250	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS04310	SM00028	Tetratricopeptide repeats
AM1_RS04330	SM00382	ATPases associated with a variety of cellular activities
AM1_RS04385	SM00382	ATPases associated with a variety of cellular activities
AM1_RS04410	SM00028	Tetratricopeptide repeats
AM1_RS04420	SM01248	AM1_RS04420
AM1_RS04425	SM01247	AM1_RS04425
AM1_RS04435	SM00642	Alpha-amylase domain
AM1_RS04500	SM00116	Domain in cystathionine beta-synthase and other proteins.
AM1_RS04515	SM00382	ATPases associated with a variety of cellular activities
AM1_RS04630	SM00966	SpoVT / AbrB like domain 
AM1_RS04680	SM00320	WD40 repeats
AM1_RS04685	SM00267	diguanylate cyclase
AM1_RS04785	SM00450	Rhodanese Homology Domain
AM1_RS04795	SM00825	Beta-ketoacyl synthase
AM1_RS04830	SM00957	SecA DEAD-like domain
AM1_RS04830	SM00958	SecA preprotein cross-linking domain
AM1_RS04835	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS04860	SM00912	haemagglutination activity domain
AM1_RS04885	SM00448	cheY-homologous receiver domain
AM1_RS04905	SM00387	Histidine kinase-like ATPases
AM1_RS04905	SM00448	cheY-homologous receiver domain
AM1_RS04915	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM1_RS04925	SM00448	cheY-homologous receiver domain
AM1_RS04930	SM00448	cheY-homologous receiver domain
AM1_RS04950	SM00271	DnaJ molecular chaperone homology domain
AM1_RS04970	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AM1_RS04970	SM00465	GIY-YIG type nucleases (URI domain)
AM1_RS05045	SM00028	Tetratricopeptide repeats
AM1_RS05060	SM00855	Phosphoglycerate mutase family
AM1_RS05075	SM00450	Rhodanese Homology Domain
AM1_RS05115	SM00411	bacterial (prokaryotic) histone like domain
AM1_RS05130	SM00331	Sigma factor PP2C-like phosphatases
AM1_RS05130	SM00448	cheY-homologous receiver domain
AM1_RS05160	SM00487	DEAD-like helicases superfamily
AM1_RS05160	SM00490	helicase superfamily c-terminal domain
AM1_RS05265	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AM1_RS05265	SM00292	breast cancer carboxy-terminal domain
AM1_RS05265	SM00532	Ligase N family
AM1_RS05305	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AM1_RS05390	SM00287	Bacterial SH3 domain homologues
AM1_RS05430	SM00382	ATPases associated with a variety of cellular activities
AM1_RS05445	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM1_RS05515	SM00191	Integrin alpha (beta-propellor repeats).
AM1_RS05515	SM00237	Domains in Na-Ca exchangers and integrin-beta4
AM1_RS05555	SM00937	AM1_RS05555
AM1_RS05585	SM00662	RNA polymerases D
AM1_RS05600	SM01018	B12 binding domain
AM1_RS05625	SM00052	Putative diguanylate phosphodiesterase
AM1_RS05625	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM1_RS05625	SM00091	PAS domain
AM1_RS05625	SM00267	diguanylate cyclase
AM1_RS05725	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM1_RS05735	SM00670	Large family of predicted nucleotide-binding domains
AM1_RS05820	SM00382	ATPases associated with a variety of cellular activities
AM1_RS05825	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AM1_RS05825	SM00851	MGS-like domain
AM1_RS05865	SM00342	helix_turn_helix, arabinose operon control protein
AM1_RS06050	SM00382	ATPases associated with a variety of cellular activities
AM1_RS06060	SM00382	ATPases associated with a variety of cellular activities
AM1_RS06070	SM00382	ATPases associated with a variety of cellular activities
AM1_RS06120	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS06125	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS06130	SM00448	cheY-homologous receiver domain
AM1_RS06140	SM00852	Probable molybdopterin binding domain
AM1_RS06150	SM00849	Metallo-beta-lactamase superfamily
AM1_RS06150	SM00903	Flavin reductase like domain
AM1_RS06155	SM00849	Metallo-beta-lactamase superfamily
AM1_RS06155	SM00903	Flavin reductase like domain
AM1_RS06185	SM00364	Leucine-rich repeats, bacterial type
AM1_RS06185	SM00365	Leucine-rich repeat, SDS22-like subfamily
AM1_RS06185	SM00369	Leucine-rich repeats, typical (most populated) subfamily
AM1_RS06225	SM00100	Cyclic nucleotide-monophosphate binding domain
AM1_RS06230	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
AM1_RS06230	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM1_RS06250	SM00028	Tetratricopeptide repeats
AM1_RS06280	SM00460	Transglutaminase/protease-like homologues
AM1_RS06300	SM00052	Putative diguanylate phosphodiesterase
AM1_RS06300	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM1_RS06300	SM00091	PAS domain
AM1_RS06300	SM00267	diguanylate cyclase
AM1_RS06350	SM00320	WD40 repeats
AM1_RS06395	SM01211	AM1_RS06395
AM1_RS06445	SM00357	Cold shock protein domain
AM1_RS06485	SM00316	Ribosomal protein S1-like RNA-binding domain
AM1_RS06490	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
AM1_RS06535	SM00318	Staphylococcal nuclease homologues
AM1_RS06550	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM1_RS06550	SM00387	Histidine kinase-like ATPases
AM1_RS06550	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS06555	SM00421	helix_turn_helix, Lux Regulon
AM1_RS06555	SM00448	cheY-homologous receiver domain
AM1_RS06600	SM00382	ATPases associated with a variety of cellular activities
AM1_RS06610	SM00448	cheY-homologous receiver domain
AM1_RS06610	SM00862	Transcriptional regulatory protein, C terminal
AM1_RS06615	SM00387	Histidine kinase-like ATPases
AM1_RS06615	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS06665	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AM1_RS06680	SM01230	AM1_RS06680
AM1_RS06690	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS06690	SM00387	Histidine kinase-like ATPases
AM1_RS06690	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS06690	SM00448	cheY-homologous receiver domain
AM1_RS06695	SM00091	PAS domain
AM1_RS06695	SM00387	Histidine kinase-like ATPases
AM1_RS06695	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS06695	SM00448	cheY-homologous receiver domain
AM1_RS06700	SM00448	cheY-homologous receiver domain
AM1_RS06700	SM00862	Transcriptional regulatory protein, C terminal
AM1_RS06715	SM00116	Domain in cystathionine beta-synthase and other proteins.
AM1_RS06715	SM00924	MgtE intracellular N domain
AM1_RS06730	SM00257	Lysin motif
AM1_RS06810	SM00829	Enoylreductase
AM1_RS06870	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AM1_RS06920	SM00062	Bacterial periplasmic substrate-binding proteins
AM1_RS06935	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS06935	SM00387	Histidine kinase-like ATPases
AM1_RS06935	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS06935	SM00448	cheY-homologous receiver domain
AM1_RS06960	SM00237	Domains in Na-Ca exchangers and integrin-beta4
AM1_RS06965	SM00422	helix_turn_helix, mercury resistance
AM1_RS06980	SM00421	helix_turn_helix, Lux Regulon
AM1_RS06980	SM00448	cheY-homologous receiver domain
AM1_RS07005	SM00028	Tetratricopeptide repeats
AM1_RS07010	SM00450	Rhodanese Homology Domain
AM1_RS07035	SM00028	Tetratricopeptide repeats
AM1_RS07035	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS07045	SM00248	ankyrin repeats
AM1_RS07065	SM00028	Tetratricopeptide repeats
AM1_RS07065	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS07130	SM00382	ATPases associated with a variety of cellular activities
AM1_RS07135	SM00382	ATPases associated with a variety of cellular activities
AM1_RS07225	SM00829	Enoylreductase
AM1_RS07265	SM00267	diguanylate cyclase
AM1_RS07310	SM00267	diguanylate cyclase
AM1_RS07310	SM00448	cheY-homologous receiver domain
AM1_RS07320	SM00235	Zinc-dependent metalloprotease
AM1_RS07355	SM00448	cheY-homologous receiver domain
AM1_RS07360	SM00460	Transglutaminase/protease-like homologues
AM1_RS07380	SM00382	ATPases associated with a variety of cellular activities
AM1_RS07380	SM00393	Putative single-stranded nucleic acids-binding domain
AM1_RS07390	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS07390	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS07390	SM00387	Histidine kinase-like ATPases
AM1_RS07390	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS07480	SM00474	3'-5' exonuclease
AM1_RS07530	SM00237	Domains in Na-Ca exchangers and integrin-beta4
AM1_RS07540	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM1_RS07550	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AM1_RS07565	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM1_RS07580	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM1_RS07585	SM00487	DEAD-like helicases superfamily
AM1_RS07585	SM00490	helicase superfamily c-terminal domain
AM1_RS07600	SM00316	Ribosomal protein S1-like RNA-binding domain
AM1_RS07610	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM1_RS07615	SM00327	von Willebrand factor (vWF) type A domain
AM1_RS07625	SM00028	Tetratricopeptide repeats
AM1_RS07645	SM00358	Double-stranded RNA binding motif
AM1_RS07645	SM00535	Ribonuclease III family
AM1_RS07655	SM00028	Tetratricopeptide repeats
AM1_RS07655	SM00271	DnaJ molecular chaperone homology domain
AM1_RS07665	SM00448	cheY-homologous receiver domain
AM1_RS07665	SM00862	Transcriptional regulatory protein, C terminal
AM1_RS07685	SM00052	Putative diguanylate phosphodiesterase
AM1_RS07685	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM1_RS07685	SM00091	PAS domain
AM1_RS07685	SM00267	diguanylate cyclase
AM1_RS07685	SM00448	cheY-homologous receiver domain
AM1_RS07690	SM00448	cheY-homologous receiver domain
AM1_RS07695	SM00387	Histidine kinase-like ATPases
AM1_RS07695	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS07725	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM1_RS07725	SM00876	Biotin and Thiamin Synthesis associated domain
AM1_RS07740	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS07740	SM00387	Histidine kinase-like ATPases
AM1_RS07740	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS07775	SM00382	ATPases associated with a variety of cellular activities
AM1_RS07780	SM00240	Forkhead associated domain
AM1_RS07825	SM00650	Ribosomal RNA adenine dimethylases
AM1_RS07855	SM00382	ATPases associated with a variety of cellular activities
AM1_RS07905	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AM1_RS07950	SM00961	Ribulose bisphosphate carboxylase, small chain
AM1_RS07960	SM00961	Ribulose bisphosphate carboxylase, small chain
AM1_RS07980	SM00028	Tetratricopeptide repeats
AM1_RS08005	SM00464	Found in ATP-dependent protease La (LON)
AM1_RS08010	SM01403	AM1_RS08010
AM1_RS08020	SM00838	Elongation factor G C-terminus
AM1_RS08020	SM00889	Elongation factor G, domain IV
AM1_RS08060	SM00073	Histidine Phosphotransfer domain
AM1_RS08070	SM00421	helix_turn_helix, Lux Regulon
AM1_RS08070	SM00448	cheY-homologous receiver domain
AM1_RS08125	SM00382	ATPases associated with a variety of cellular activities
AM1_RS08210	SM00240	Forkhead associated domain
AM1_RS08230	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS08230	SM00267	diguanylate cyclase
AM1_RS08265	SM00382	ATPases associated with a variety of cellular activities
AM1_RS08290	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS08295	SM00822	AM1_RS08295
AM1_RS08315	SM01234	AM1_RS08315
AM1_RS08345	SM01240	AM1_RS08345
AM1_RS08360	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS08360	SM00387	Histidine kinase-like ATPases
AM1_RS08360	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS08360	SM00448	cheY-homologous receiver domain
AM1_RS08405	SM00450	Rhodanese Homology Domain
AM1_RS08425	SM00382	ATPases associated with a variety of cellular activities
AM1_RS08535	SM00382	ATPases associated with a variety of cellular activities
AM1_RS08560	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
AM1_RS08620	SM00563	Phosphate acyltransferases
AM1_RS08635	SM00052	Putative diguanylate phosphodiesterase
AM1_RS08665	SM00852	Probable molybdopterin binding domain
AM1_RS08680	SM00382	ATPases associated with a variety of cellular activities
AM1_RS08685	SM00028	Tetratricopeptide repeats
AM1_RS08695	SM00382	ATPases associated with a variety of cellular activities
AM1_RS08695	SM01086	C-terminal, D2-small domain, of ClpB protein
AM1_RS08765	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS08765	SM00448	cheY-homologous receiver domain
AM1_RS08780	SM00091	PAS domain
AM1_RS08780	SM00387	Histidine kinase-like ATPases
AM1_RS08780	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS08780	SM00448	cheY-homologous receiver domain
AM1_RS08820	SM00255	Toll - interleukin 1 - resistance
AM1_RS08820	SM00364	Leucine-rich repeats, bacterial type
AM1_RS08820	SM00365	Leucine-rich repeat, SDS22-like subfamily
AM1_RS08820	SM00369	Leucine-rich repeats, typical (most populated) subfamily
AM1_RS08920	SM00506	Appr-1"-p processing enzyme
AM1_RS09060	SM00360	RNA recognition motif
AM1_RS09120	SM00364	Leucine-rich repeats, bacterial type
AM1_RS09120	SM00365	Leucine-rich repeat, SDS22-like subfamily
AM1_RS09120	SM00369	Leucine-rich repeats, typical (most populated) subfamily
AM1_RS09135	SM00327	von Willebrand factor (vWF) type A domain
AM1_RS09145	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AM1_RS09145	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AM1_RS09145	SM00493	AM1_RS09145
AM1_RS09205	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AM1_RS09240	SM00671	Sel1-like repeats.
AM1_RS09280	SM00342	helix_turn_helix, arabinose operon control protein
AM1_RS09330	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AM1_RS09330	SM00245	tail specific protease
AM1_RS09350	SM00052	Putative diguanylate phosphodiesterase
AM1_RS09360	SM01350	AM1_RS09360
AM1_RS09510	SM00878	Biotin carboxylase C-terminal domain
AM1_RS09525	SM00382	ATPases associated with a variety of cellular activities
AM1_RS09525	SM01086	C-terminal, D2-small domain, of ClpB protein
AM1_RS09550	SM00382	ATPases associated with a variety of cellular activities
AM1_RS09570	SM00646	AM1_RS09570
AM1_RS09635	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AM1_RS09635	SM00474	3'-5' exonuclease
AM1_RS09635	SM00475	5'-3' exonuclease
AM1_RS09635	SM00482	DNA polymerase A domain
AM1_RS09660	SM00855	Phosphoglycerate mutase family
AM1_RS09710	SM00173	Ras subfamily of RAS small GTPases
AM1_RS09710	SM00174	Rho (Ras homology) subfamily of Ras-like small GTPases
AM1_RS09710	SM00175	Rab subfamily of small GTPases
AM1_RS09745	SM01209	AM1_RS09745
AM1_RS09745	SM01210	AM1_RS09745
AM1_RS09770	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM1_RS09775	SM00240	Forkhead associated domain
AM1_RS09775	SM00382	ATPases associated with a variety of cellular activities
AM1_RS09780	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS09785	SM00116	Domain in cystathionine beta-synthase and other proteins.
AM1_RS09795	SM01228	AM1_RS09795
AM1_RS09845	SM00116	Domain in cystathionine beta-synthase and other proteins.
AM1_RS09890	SM00382	ATPases associated with a variety of cellular activities
AM1_RS09950	SM00421	helix_turn_helix, Lux Regulon
AM1_RS09950	SM00448	cheY-homologous receiver domain
AM1_RS10000	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM1_RS10040	SM00487	DEAD-like helicases superfamily
AM1_RS10055	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS10055	SM00421	helix_turn_helix, Lux Regulon
AM1_RS10290	SM00382	ATPases associated with a variety of cellular activities
AM1_RS10295	SM00642	Alpha-amylase domain
AM1_RS10300	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS10325	SM00382	ATPases associated with a variety of cellular activities
AM1_RS10350	SM00052	Putative diguanylate phosphodiesterase
AM1_RS10350	SM00267	diguanylate cyclase
AM1_RS10350	SM00448	cheY-homologous receiver domain
AM1_RS10415	SM00382	ATPases associated with a variety of cellular activities
AM1_RS10425	SM00567	E-Z type HEAT repeats
AM1_RS10435	SM00909	Sporulation and spore germination
AM1_RS10490	SM00830	Chorismate mutase type II
AM1_RS10500	SM00382	ATPases associated with a variety of cellular activities
AM1_RS10510	SM00363	S4 RNA-binding domain
AM1_RS10515	SM00481	DNA polymerase alpha chain like domain
AM1_RS10655	SM00984	UDP binding domain
AM1_RS10690	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM1_RS10695	SM00331	Sigma factor PP2C-like phosphatases
AM1_RS10695	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AM1_RS10750	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS10750	SM00240	Forkhead associated domain
AM1_RS10750	SM00387	Histidine kinase-like ATPases
AM1_RS10750	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS10760	SM00347	helix_turn_helix multiple antibiotic resistance protein
AM1_RS10820	SM00479	AM1_RS10820
AM1_RS10870	SM00861	Transketolase, pyrimidine binding domain
AM1_RS10885	SM00028	Tetratricopeptide repeats
AM1_RS10925	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
AM1_RS10930	SM00028	Tetratricopeptide repeats
AM1_RS10970	SM00382	ATPases associated with a variety of cellular activities
AM1_RS10980	SM00507	HNH nucleases
AM1_RS11045	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
AM1_RS11090	SM00487	DEAD-like helicases superfamily
AM1_RS11090	SM00490	helicase superfamily c-terminal domain
AM1_RS11100	SM00829	Enoylreductase
AM1_RS11105	SM00240	Forkhead associated domain
AM1_RS11105	SM00382	ATPases associated with a variety of cellular activities
AM1_RS11140	SM00028	Tetratricopeptide repeats
AM1_RS11220	SM01093	AM1_RS11220
AM1_RS11230	SM01093	AM1_RS11230
AM1_RS11290	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AM1_RS11290	SM01232	AM1_RS11290
AM1_RS11300	SM00387	Histidine kinase-like ATPases
AM1_RS11300	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS11300	SM01248	AM1_RS11300
AM1_RS11305	SM00320	WD40 repeats
AM1_RS11310	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS11330	SM00912	haemagglutination activity domain
AM1_RS11340	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
AM1_RS11340	SM00481	DNA polymerase alpha chain like domain
AM1_RS11345	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AM1_RS11345	SM00954	Region found in RelA / SpoT proteins
AM1_RS11350	SM00327	von Willebrand factor (vWF) type A domain
AM1_RS11360	SM00320	WD40 repeats
AM1_RS11365	SM00646	AM1_RS11365
AM1_RS11440	SM00382	ATPases associated with a variety of cellular activities
AM1_RS11515	SM00248	ankyrin repeats
AM1_RS11535	SM00240	Forkhead associated domain
AM1_RS11555	SM00240	Forkhead associated domain
AM1_RS11565	SM00400	zinc finger
AM1_RS11565	SM00493	AM1_RS11565
AM1_RS11620	SM00382	ATPases associated with a variety of cellular activities
AM1_RS11630	SM00530	Helix-turn-helix XRE-family like proteins 
AM1_RS11640	SM00028	Tetratricopeptide repeats
AM1_RS11685	SM00028	Tetratricopeptide repeats
AM1_RS11820	SM00360	RNA recognition motif
AM1_RS11840	SM00644	AM1_RS11840
AM1_RS11925	SM00240	Forkhead associated domain
AM1_RS11930	SM00240	Forkhead associated domain
AM1_RS11950	SM00028	Tetratricopeptide repeats
AM1_RS11955	SM00838	Elongation factor G C-terminus
AM1_RS11955	SM00889	Elongation factor G, domain IV
AM1_RS11965	SM00248	ankyrin repeats
AM1_RS11990	SM00849	Metallo-beta-lactamase superfamily
AM1_RS11995	SM00904	Riboflavin kinase
AM1_RS12000	SM00382	ATPases associated with a variety of cellular activities
AM1_RS12040	SM00450	Rhodanese Homology Domain
AM1_RS12150	SM00240	Forkhead associated domain
AM1_RS12305	SM00419	helix_turn_helix, cAMP Regulatory protein
AM1_RS12320	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AM1_RS12390	SM00028	Tetratricopeptide repeats
AM1_RS12485	SM00028	Tetratricopeptide repeats
AM1_RS12485	SM00255	Toll - interleukin 1 - resistance
AM1_RS12500	SM00028	Tetratricopeptide repeats
AM1_RS12645	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS12665	SM00448	cheY-homologous receiver domain
AM1_RS12670	SM01118	AM1_RS12670
AM1_RS12675	SM00244	prohibitin homologues
AM1_RS12680	SM00387	Histidine kinase-like ATPases
AM1_RS12680	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS12705	SM00968	SMC proteins Flexible Hinge Domain
AM1_RS12775	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS12805	SM00028	Tetratricopeptide repeats
AM1_RS12855	SM00382	ATPases associated with a variety of cellular activities
AM1_RS12870	SM00028	Tetratricopeptide repeats
AM1_RS12870	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS12890	SM00028	Tetratricopeptide repeats
AM1_RS12945	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
AM1_RS12955	SM00052	Putative diguanylate phosphodiesterase
AM1_RS12955	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS12955	SM00240	Forkhead associated domain
AM1_RS12955	SM00267	diguanylate cyclase
AM1_RS12975	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AM1_RS12975	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AM1_RS12980	SM00649	Ribosomal protein L11/L12
AM1_RS13015	SM00240	Forkhead associated domain
AM1_RS13015	SM00382	ATPases associated with a variety of cellular activities
AM1_RS13060	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AM1_RS13075	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS13240	SM01091	Transporter associated domain
AM1_RS13265	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
AM1_RS13265	SM01080	AM1_RS13265
AM1_RS13310	SM00756	AM1_RS13310
AM1_RS13325	SM00267	diguanylate cyclase
AM1_RS13350	SM00320	WD40 repeats
AM1_RS13395	SM00028	Tetratricopeptide repeats
AM1_RS13415	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS13470	SM00382	ATPases associated with a variety of cellular activities
AM1_RS13525	SM00567	E-Z type HEAT repeats
AM1_RS13545	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AM1_RS13575	SM00100	Cyclic nucleotide-monophosphate binding domain
AM1_RS13585	SM00052	Putative diguanylate phosphodiesterase
AM1_RS13585	SM00267	diguanylate cyclase
AM1_RS13595	SM00173	Ras subfamily of RAS small GTPases
AM1_RS13595	SM00174	Rho (Ras homology) subfamily of Ras-like small GTPases
AM1_RS13595	SM00175	Rab subfamily of small GTPases
AM1_RS13630	SM00644	AM1_RS13630
AM1_RS13675	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AM1_RS13705	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AM1_RS13760	SM00320	WD40 repeats
AM1_RS13765	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AM1_RS13775	SM00421	helix_turn_helix, Lux Regulon
AM1_RS13835	SM00320	WD40 repeats
AM1_RS13840	SM00419	helix_turn_helix, cAMP Regulatory protein
AM1_RS13850	SM00961	Ribulose bisphosphate carboxylase, small chain
AM1_RS13865	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AM1_RS13875	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AM1_RS13940	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AM1_RS13945	SM01004	Delta-aminolevulinic acid dehydratase
AM1_RS13955	SM00382	ATPases associated with a variety of cellular activities
AM1_RS14040	SM00393	Putative single-stranded nucleic acids-binding domain
AM1_RS14060	SM00382	ATPases associated with a variety of cellular activities
AM1_RS14060	SM00760	Bacterial dnaA protein helix-turn-helix domain
AM1_RS14065	SM00480	DNA polymerase III beta subunit
AM1_RS14085	SM00421	helix_turn_helix, Lux Regulon
AM1_RS14085	SM00448	cheY-homologous receiver domain
AM1_RS14090	SM00226	Low molecular weight phosphatase family
AM1_RS14135	SM00506	Appr-1"-p processing enzyme
AM1_RS14145	SM00434	DNA Topoisomerase IV
AM1_RS14180	SM01248	AM1_RS14180
AM1_RS14190	SM00028	Tetratricopeptide repeats
AM1_RS14230	SM00822	AM1_RS14230
AM1_RS14320	SM00244	prohibitin homologues
AM1_RS14325	SM00054	EF-hand, calcium binding motif
AM1_RS14340	SM00100	Cyclic nucleotide-monophosphate binding domain
AM1_RS14340	SM00419	helix_turn_helix, cAMP Regulatory protein
AM1_RS14355	SM00938	Nitrogen regulatory protein P-II
AM1_RS14360	SM00382	ATPases associated with a variety of cellular activities
AM1_RS14365	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS14430	SM00028	Tetratricopeptide repeats
AM1_RS14465	SM00100	Cyclic nucleotide-monophosphate binding domain
AM1_RS14465	SM00382	ATPases associated with a variety of cellular activities
AM1_RS14495	SM00422	helix_turn_helix, mercury resistance
AM1_RS14505	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
AM1_RS14505	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS14505	SM00240	Forkhead associated domain
AM1_RS14510	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS14610	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS14645	SM00028	Tetratricopeptide repeats
AM1_RS14695	SM00448	cheY-homologous receiver domain
AM1_RS14695	SM00862	Transcriptional regulatory protein, C terminal
AM1_RS14720	SM00382	ATPases associated with a variety of cellular activities
AM1_RS14740	SM00448	cheY-homologous receiver domain
AM1_RS14750	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AM1_RS14755	SM00049	Domain found in Dishevelled, Egl-10, and Pleckstrin
AM1_RS14780	SM00028	Tetratricopeptide repeats
AM1_RS14785	SM00100	Cyclic nucleotide-monophosphate binding domain
AM1_RS14785	SM00387	Histidine kinase-like ATPases
AM1_RS14790	SM00448	cheY-homologous receiver domain
AM1_RS14800	SM00320	WD40 repeats
AM1_RS14830	SM00634	Bacterial Ig-like domain (group 1)
AM1_RS14830	SM00912	haemagglutination activity domain
AM1_RS14835	SM00028	Tetratricopeptide repeats
AM1_RS14860	SM00248	ankyrin repeats
AM1_RS14890	SM00877	AM1_RS14890
AM1_RS14900	SM00897	FIST N domain
AM1_RS14910	SM01204	AM1_RS14910
AM1_RS14915	SM00052	Putative diguanylate phosphodiesterase
AM1_RS14915	SM00267	diguanylate cyclase
AM1_RS14980	SM00710	Parallel beta-helix repeats
AM1_RS15020	SM00563	Phosphate acyltransferases
AM1_RS15025	SM00327	von Willebrand factor (vWF) type A domain
AM1_RS15090	SM00925	MltA specific insert domain
AM1_RS15100	SM00052	Putative diguanylate phosphodiesterase
AM1_RS15100	SM00267	diguanylate cyclase
AM1_RS15180	SM00382	ATPases associated with a variety of cellular activities
AM1_RS15225	SM00342	helix_turn_helix, arabinose operon control protein
AM1_RS15315	SM00342	helix_turn_helix, arabinose operon control protein
AM1_RS15375	SM00342	helix_turn_helix, arabinose operon control protein
AM1_RS15425	SM00342	helix_turn_helix, arabinose operon control protein
AM1_RS15460	SM00382	ATPases associated with a variety of cellular activities
AM1_RS15480	SM00419	helix_turn_helix, cAMP Regulatory protein
AM1_RS15505	SM00287	Bacterial SH3 domain homologues
AM1_RS15585	SM00563	Phosphate acyltransferases
AM1_RS15590	SM00849	Metallo-beta-lactamase superfamily
AM1_RS15595	SM01130	AM1_RS15595
AM1_RS15600	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AM1_RS15615	SM00382	ATPases associated with a variety of cellular activities
AM1_RS15615	SM00994	ClpX C4-type zinc finger
AM1_RS15615	SM01086	C-terminal, D2-small domain, of ClpB protein
AM1_RS15625	SM00853	MutL C terminal dimerisation domain
AM1_RS15625	SM01340	AM1_RS15625
AM1_RS15635	SM00052	Putative diguanylate phosphodiesterase
AM1_RS15635	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM1_RS15635	SM00091	PAS domain
AM1_RS15635	SM00116	Domain in cystathionine beta-synthase and other proteins.
AM1_RS15635	SM00267	diguanylate cyclase
AM1_RS15640	SM00463	Small MutS-related domain
AM1_RS15640	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AM1_RS15640	SM00534	ATPase domain of DNA mismatch repair MUTS family
AM1_RS15660	SM00448	cheY-homologous receiver domain
AM1_RS15660	SM00862	Transcriptional regulatory protein, C terminal
AM1_RS15665	SM00422	helix_turn_helix, mercury resistance
AM1_RS15680	SM00387	Histidine kinase-like ATPases
AM1_RS15680	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS15685	SM00448	cheY-homologous receiver domain
AM1_RS15685	SM00862	Transcriptional regulatory protein, C terminal
AM1_RS15695	SM00642	Alpha-amylase domain
AM1_RS15705	SM00947	Carbonic anhydrase
AM1_RS15745	SM00267	diguanylate cyclase
AM1_RS15745	SM00448	cheY-homologous receiver domain
AM1_RS15745	SM00862	Transcriptional regulatory protein, C terminal
AM1_RS15755	SM00448	cheY-homologous receiver domain
AM1_RS15790	SM00382	ATPases associated with a variety of cellular activities
AM1_RS15810	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AM1_RS15825	SM00364	Leucine-rich repeats, bacterial type
AM1_RS15825	SM00365	Leucine-rich repeat, SDS22-like subfamily
AM1_RS15825	SM00369	Leucine-rich repeats, typical (most populated) subfamily
AM1_RS15830	SM00248	ankyrin repeats
AM1_RS15835	SM00320	WD40 repeats
AM1_RS15840	SM00267	diguanylate cyclase
AM1_RS15925	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AM1_RS15930	SM00563	Phosphate acyltransferases
AM1_RS16010	SM00633	Glycosyl hydrolase family 10
AM1_RS16080	SM00382	ATPases associated with a variety of cellular activities
AM1_RS16095	SM00271	DnaJ molecular chaperone homology domain
AM1_RS16120	SM00530	Helix-turn-helix XRE-family like proteins 
AM1_RS16145	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS16145	SM00387	Histidine kinase-like ATPases
AM1_RS16145	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS16150	SM00448	cheY-homologous receiver domain
AM1_RS16155	SM00387	Histidine kinase-like ATPases
AM1_RS16155	SM00448	cheY-homologous receiver domain
AM1_RS16160	SM00267	diguanylate cyclase
AM1_RS16160	SM00448	cheY-homologous receiver domain
AM1_RS16165	SM00267	diguanylate cyclase
AM1_RS16165	SM00448	cheY-homologous receiver domain
AM1_RS16170	SM00981	AM1_RS16170
AM1_RS16180	SM00897	FIST N domain
AM1_RS16180	SM01204	AM1_RS16180
AM1_RS16230	SM00855	Phosphoglycerate mutase family
AM1_RS16280	SM00663	RNA polymerase I subunit A N-terminus
AM1_RS16440	SM00984	UDP binding domain
AM1_RS16480	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AM1_RS16510	SM00917	LeuA allosteric (dimerisation) domain
AM1_RS16520	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS16535	SM00642	Alpha-amylase domain
AM1_RS16740	SM00710	Parallel beta-helix repeats
AM1_RS16825	SM00028	Tetratricopeptide repeats
AM1_RS16830	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
AM1_RS16835	SM00937	AM1_RS16835
AM1_RS16850	SM00267	diguanylate cyclase
AM1_RS16890	SM00382	ATPases associated with a variety of cellular activities
AM1_RS16905	SM00382	ATPases associated with a variety of cellular activities
AM1_RS16910	SM00448	cheY-homologous receiver domain
AM1_RS16910	SM00862	Transcriptional regulatory protein, C terminal
AM1_RS16945	SM00562	AM1_RS16945
AM1_RS16950	SM00014	Acid phosphatase homologues
AM1_RS16975	SM00073	Histidine Phosphotransfer domain
AM1_RS16975	SM00260	Two component signalling adaptor domain
AM1_RS16975	SM00387	Histidine kinase-like ATPases
AM1_RS16975	SM00448	cheY-homologous receiver domain
AM1_RS16975	SM01231	AM1_RS16975
AM1_RS16980	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM1_RS16980	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM1_RS16985	SM00260	Two component signalling adaptor domain
AM1_RS16990	SM00448	cheY-homologous receiver domain
AM1_RS16995	SM00448	cheY-homologous receiver domain
AM1_RS17005	SM00292	breast cancer carboxy-terminal domain
AM1_RS17020	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS17020	SM00287	Bacterial SH3 domain homologues
AM1_RS17025	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AM1_RS17045	SM00530	Helix-turn-helix XRE-family like proteins 
AM1_RS17080	SM00244	prohibitin homologues
AM1_RS17135	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM1_RS17150	SM00382	ATPases associated with a variety of cellular activities
AM1_RS17165	SM00028	Tetratricopeptide repeats
AM1_RS17170	SM00028	Tetratricopeptide repeats
AM1_RS17185	SM00382	ATPases associated with a variety of cellular activities
AM1_RS17185	SM00962	SRP54-type protein, GTPase domain
AM1_RS17185	SM00963	SRP54-type protein, helical bundle domain
AM1_RS17190	SM00331	Sigma factor PP2C-like phosphatases
AM1_RS17200	SM01011	Aminopeptidase P, N-terminal domain
AM1_RS17220	SM00567	E-Z type HEAT repeats
AM1_RS17325	SM00248	ankyrin repeats
AM1_RS17330	SM00852	Probable molybdopterin binding domain
AM1_RS17360	SM00320	WD40 repeats
AM1_RS17440	SM00421	helix_turn_helix, Lux Regulon
AM1_RS17450	SM00448	cheY-homologous receiver domain
AM1_RS17535	SM00248	ankyrin repeats
AM1_RS17540	SM00248	ankyrin repeats
AM1_RS17545	SM00487	DEAD-like helicases superfamily
AM1_RS17545	SM00490	helicase superfamily c-terminal domain
AM1_RS17550	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM1_RS17550	SM00091	PAS domain
AM1_RS17550	SM00387	Histidine kinase-like ATPases
AM1_RS17550	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS17560	SM00448	cheY-homologous receiver domain
AM1_RS17565	SM00052	Putative diguanylate phosphodiesterase
AM1_RS17565	SM00267	diguanylate cyclase
AM1_RS17565	SM00448	cheY-homologous receiver domain
AM1_RS17570	SM00271	DnaJ molecular chaperone homology domain
AM1_RS17580	SM00877	AM1_RS17580
AM1_RS17695	SM00028	Tetratricopeptide repeats
AM1_RS17705	SM00919	Malic enzyme, NAD binding domain
AM1_RS17705	SM01274	AM1_RS17705
AM1_RS17740	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS17755	SM00448	cheY-homologous receiver domain
AM1_RS17760	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AM1_RS17760	SM00493	AM1_RS17760
AM1_RS17765	SM00478	endonuclease III
AM1_RS17765	SM00525	AM1_RS17765
AM1_RS17810	SM00903	Flavin reductase like domain
AM1_RS17840	SM00841	Elongation factor P, C-terminal
AM1_RS17840	SM01185	AM1_RS17840
AM1_RS17845	SM00052	Putative diguanylate phosphodiesterase
AM1_RS17845	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM1_RS17845	SM00091	PAS domain
AM1_RS17845	SM00267	diguanylate cyclase
AM1_RS17850	SM00387	Histidine kinase-like ATPases
AM1_RS17850	SM00448	cheY-homologous receiver domain
AM1_RS17860	SM00996	S-adenosyl-L-homocysteine hydrolase
AM1_RS17860	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
AM1_RS17865	SM00028	Tetratricopeptide repeats
AM1_RS17885	SM00028	Tetratricopeptide repeats
AM1_RS17915	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS17920	SM00959	Rho termination factor, N-terminal domain
AM1_RS17975	SM00363	S4 RNA-binding domain
AM1_RS17990	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
AM1_RS17990	SM00240	Forkhead associated domain
AM1_RS18005	SM00363	S4 RNA-binding domain
AM1_RS18010	SM00244	prohibitin homologues
AM1_RS18050	SM01192	AM1_RS18050
AM1_RS18050	SM01193	AM1_RS18050
AM1_RS18070	SM00363	S4 RNA-binding domain
AM1_RS18070	SM01390	AM1_RS18070
AM1_RS18100	SM00028	Tetratricopeptide repeats
AM1_RS18100	SM00271	DnaJ molecular chaperone homology domain
AM1_RS18115	SM00240	Forkhead associated domain
AM1_RS18180	SM00382	ATPases associated with a variety of cellular activities
AM1_RS18260	SM00382	ATPases associated with a variety of cellular activities
AM1_RS18285	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS18300	SM00732	Likely ribonuclease with RNase H fold.
AM1_RS18355	SM00448	cheY-homologous receiver domain
AM1_RS18355	SM00862	Transcriptional regulatory protein, C terminal
AM1_RS18360	SM00487	DEAD-like helicases superfamily
AM1_RS18360	SM00490	helicase superfamily c-terminal domain
AM1_RS18360	SM01142	AM1_RS18360
AM1_RS18365	SM00073	Histidine Phosphotransfer domain
AM1_RS18365	SM00260	Two component signalling adaptor domain
AM1_RS18365	SM00387	Histidine kinase-like ATPases
AM1_RS18365	SM00448	cheY-homologous receiver domain
AM1_RS18365	SM01231	AM1_RS18365
AM1_RS18370	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM1_RS18370	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM1_RS18375	SM00260	Two component signalling adaptor domain
AM1_RS18380	SM00448	cheY-homologous receiver domain
AM1_RS18390	SM00986	Uracil DNA glycosylase superfamily
AM1_RS18390	SM00987	UreE urease accessory protein, C-terminal domain 
AM1_RS18400	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS18405	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AM1_RS18410	SM00478	endonuclease III
AM1_RS18410	SM00525	AM1_RS18410
AM1_RS18435	SM00840	AM1_RS18435
AM1_RS18450	SM00052	Putative diguanylate phosphodiesterase
AM1_RS18450	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM1_RS18450	SM00091	PAS domain
AM1_RS18450	SM00240	Forkhead associated domain
AM1_RS18450	SM00267	diguanylate cyclase
AM1_RS18455	SM00257	Lysin motif
AM1_RS18460	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AM1_RS18465	SM00382	ATPases associated with a variety of cellular activities
AM1_RS18525	SM01321	AM1_RS18525
AM1_RS18645	SM00316	Ribosomal protein S1-like RNA-binding domain
AM1_RS18645	SM00732	Likely ribonuclease with RNase H fold.
AM1_RS18705	SM01011	Aminopeptidase P, N-terminal domain
AM1_RS18715	SM00382	ATPases associated with a variety of cellular activities
AM1_RS18715	SM00962	SRP54-type protein, GTPase domain
AM1_RS18715	SM00963	SRP54-type protein, helical bundle domain
AM1_RS18765	SM00487	DEAD-like helicases superfamily
AM1_RS18765	SM00490	helicase superfamily c-terminal domain
AM1_RS18765	SM00982	AM1_RS18765
AM1_RS18765	SM01058	CarD-like/TRCF domain
AM1_RS18770	SM00986	Uracil DNA glycosylase superfamily
AM1_RS18770	SM00987	UreE urease accessory protein, C-terminal domain 
AM1_RS19030	SM00327	von Willebrand factor (vWF) type A domain
AM1_RS19035	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AM1_RS19050	SM00091	PAS domain
AM1_RS19050	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM1_RS19050	SM00387	Histidine kinase-like ATPases
AM1_RS19050	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS19060	SM00316	Ribosomal protein S1-like RNA-binding domain
AM1_RS19060	SM00357	Cold shock protein domain
AM1_RS19060	SM00955	AM1_RS19060
AM1_RS19110	SM00028	Tetratricopeptide repeats
AM1_RS19165	SM01207	AM1_RS19165
AM1_RS19300	SM00235	Zinc-dependent metalloprotease
AM1_RS19310	SM00382	ATPases associated with a variety of cellular activities
AM1_RS19325	SM00240	Forkhead associated domain
AM1_RS19370	SM00387	Histidine kinase-like ATPases
AM1_RS19370	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS19370	SM00448	cheY-homologous receiver domain
AM1_RS19385	SM00382	ATPases associated with a variety of cellular activities
AM1_RS19435	SM00320	WD40 repeats
AM1_RS19480	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS19480	SM00421	helix_turn_helix, Lux Regulon
AM1_RS19495	SM00028	Tetratricopeptide repeats
AM1_RS19525	SM00267	diguanylate cyclase
AM1_RS19530	SM00873	B3/4 domain
AM1_RS19530	SM00874	tRNA synthetase B5 domain
AM1_RS19530	SM00896	Ferredoxin-fold anticodon binding domain
AM1_RS19550	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS19555	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS19560	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS19565	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS19570	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS19575	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS19615	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AM1_RS19615	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AM1_RS19640	SM00849	Metallo-beta-lactamase superfamily
AM1_RS19655	SM00912	haemagglutination activity domain
AM1_RS19680	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AM1_RS19680	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AM1_RS19695	SM01001	AIR carboxylase
AM1_RS19710	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AM1_RS19725	SM00363	S4 RNA-binding domain
AM1_RS19755	SM00028	Tetratricopeptide repeats
AM1_RS19765	SM00382	ATPases associated with a variety of cellular activities
AM1_RS19780	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AM1_RS19790	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AM1_RS19795	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM1_RS19805	SM00100	Cyclic nucleotide-monophosphate binding domain
AM1_RS19885	SM00382	ATPases associated with a variety of cellular activities
AM1_RS19900	SM00028	Tetratricopeptide repeats
AM1_RS19980	SM00883	Chaperonin 10 Kd subunit
AM1_RS20065	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS20065	SM00387	Histidine kinase-like ATPases
AM1_RS20065	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS20065	SM00448	cheY-homologous receiver domain
AM1_RS20095	SM01225	AM1_RS20095
AM1_RS20130	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AM1_RS20150	SM00382	ATPases associated with a variety of cellular activities
AM1_RS20205	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AM1_RS20205	SM00245	tail specific protease
AM1_RS20230	SM00989	AM1_RS20230
AM1_RS20245	SM00989	AM1_RS20245
AM1_RS20315	SM00320	WD40 repeats
AM1_RS20350	SM00327	von Willebrand factor (vWF) type A domain
AM1_RS20350	SM00609	Vault protein Inter-alpha-Trypsin domain
AM1_RS20395	SM00387	Histidine kinase-like ATPases
AM1_RS20395	SM00433	TopoisomeraseII
AM1_RS20450	SM00226	Low molecular weight phosphatase family
AM1_RS20495	SM00240	Forkhead associated domain
AM1_RS20505	SM00240	Forkhead associated domain
AM1_RS20540	SM00710	Parallel beta-helix repeats
AM1_RS20555	SM00448	cheY-homologous receiver domain
AM1_RS20560	SM00091	PAS domain
AM1_RS20560	SM00240	Forkhead associated domain
AM1_RS20560	SM00387	Histidine kinase-like ATPases
AM1_RS20560	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS20565	SM00836	DALR anticodon binding domain
AM1_RS20565	SM01016	Arginyl tRNA synthetase N terminal dom
AM1_RS20585	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS20615	SM00829	Enoylreductase
AM1_RS20640	SM00316	Ribosomal protein S1-like RNA-binding domain
AM1_RS20710	SM00267	diguanylate cyclase
AM1_RS20710	SM01079	AM1_RS20710
AM1_RS20800	SM00382	ATPases associated with a variety of cellular activities
AM1_RS20805	SM00028	Tetratricopeptide repeats
AM1_RS20905	SM00320	WD40 repeats
AM1_RS20910	SM00240	Forkhead associated domain
AM1_RS20925	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS20965	SM00382	ATPases associated with a variety of cellular activities
AM1_RS21000	SM01133	AM1_RS21000
AM1_RS21100	SM00028	Tetratricopeptide repeats
AM1_RS21130	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM1_RS21155	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AM1_RS21155	SM00245	tail specific protease
AM1_RS21160	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AM1_RS21200	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AM1_RS21210	SM00028	Tetratricopeptide repeats
AM1_RS21300	SM01382	AM1_RS21300
AM1_RS21300	SM01383	AM1_RS21300
AM1_RS21315	SM00322	K homology RNA-binding domain
AM1_RS21335	SM01374	AM1_RS21335
AM1_RS21340	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AM1_RS21385	SM00316	Ribosomal protein S1-like RNA-binding domain
AM1_RS21395	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS21430	SM00327	von Willebrand factor (vWF) type A domain
AM1_RS21445	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS21445	SM00421	helix_turn_helix, Lux Regulon
AM1_RS21450	SM00450	Rhodanese Homology Domain
AM1_RS21455	SM00028	Tetratricopeptide repeats
AM1_RS21455	SM00320	WD40 repeats
AM1_RS21475	SM00320	WD40 repeats
AM1_RS21525	SM00173	Ras subfamily of RAS small GTPases
AM1_RS21525	SM00174	Rho (Ras homology) subfamily of Ras-like small GTPases
AM1_RS21525	SM00175	Rab subfamily of small GTPases
AM1_RS21530	SM00028	Tetratricopeptide repeats
AM1_RS21535	SM00028	Tetratricopeptide repeats
AM1_RS21540	SM00028	Tetratricopeptide repeats
AM1_RS21555	SM00382	ATPases associated with a variety of cellular activities
AM1_RS21605	SM00382	ATPases associated with a variety of cellular activities
AM1_RS21645	SM00267	diguanylate cyclase
AM1_RS21720	SM00479	AM1_RS21720
AM1_RS21735	SM00320	WD40 repeats
AM1_RS21735	SM00773	Proposed nucleic acid binding domain
AM1_RS21740	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS21740	SM00387	Histidine kinase-like ATPases
AM1_RS21740	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS21740	SM00448	cheY-homologous receiver domain
AM1_RS21745	SM00448	cheY-homologous receiver domain
AM1_RS21750	SM00387	Histidine kinase-like ATPases
AM1_RS21750	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS21765	SM01236	AM1_RS21765
AM1_RS21780	SM01004	Delta-aminolevulinic acid dehydratase
AM1_RS21795	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
AM1_RS21815	SM00955	AM1_RS21815
AM1_RS21845	SM00829	Enoylreductase
AM1_RS21865	SM00387	Histidine kinase-like ATPases
AM1_RS21865	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS21865	SM00448	cheY-homologous receiver domain
AM1_RS21870	SM00382	ATPases associated with a variety of cellular activities
AM1_RS21945	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AM1_RS21995	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AM1_RS21995	SM00245	tail specific protease
AM1_RS22090	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AM1_RS22090	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AM1_RS22090	SM00493	AM1_RS22090
AM1_RS22140	SM00100	Cyclic nucleotide-monophosphate binding domain
AM1_RS22245	SM00382	ATPases associated with a variety of cellular activities
AM1_RS22280	SM00905	Dihydroneopterin aldolase
AM1_RS22290	SM00382	ATPases associated with a variety of cellular activities
AM1_RS22350	SM00363	S4 RNA-binding domain
AM1_RS22420	SM00052	Putative diguanylate phosphodiesterase
AM1_RS22420	SM00267	diguanylate cyclase
AM1_RS22455	SM00382	ATPases associated with a variety of cellular activities
AM1_RS22510	SM00912	haemagglutination activity domain
AM1_RS22525	SM00912	haemagglutination activity domain
AM1_RS22540	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AM1_RS22540	SM00245	tail specific protease
AM1_RS22570	SM00267	diguanylate cyclase
AM1_RS22570	SM00448	cheY-homologous receiver domain
AM1_RS22580	SM00052	Putative diguanylate phosphodiesterase
AM1_RS22580	SM00267	diguanylate cyclase
AM1_RS22580	SM00448	cheY-homologous receiver domain
AM1_RS22615	SM00320	WD40 repeats
AM1_RS22620	SM00342	helix_turn_helix, arabinose operon control protein
AM1_RS22635	SM00829	Enoylreductase
AM1_RS22640	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM1_RS22640	SM00091	PAS domain
AM1_RS22785	SM00382	ATPases associated with a variety of cellular activities
AM1_RS22800	SM00382	ATPases associated with a variety of cellular activities
AM1_RS22825	SM00382	ATPases associated with a variety of cellular activities
AM1_RS22855	SM00116	Domain in cystathionine beta-synthase and other proteins.
AM1_RS22870	SM00387	Histidine kinase-like ATPases
AM1_RS22870	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS22875	SM00421	helix_turn_helix, Lux Regulon
AM1_RS22875	SM00448	cheY-homologous receiver domain
AM1_RS22890	SM00331	Sigma factor PP2C-like phosphatases
AM1_RS22890	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AM1_RS22895	SM00448	cheY-homologous receiver domain
AM1_RS22900	SM00387	Histidine kinase-like ATPases
AM1_RS22900	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS22900	SM00448	cheY-homologous receiver domain
AM1_RS22905	SM00387	Histidine kinase-like ATPases
AM1_RS22905	SM00448	cheY-homologous receiver domain
AM1_RS22950	SM00421	helix_turn_helix, Lux Regulon
AM1_RS22950	SM00448	cheY-homologous receiver domain
AM1_RS22955	SM00387	Histidine kinase-like ATPases
AM1_RS22985	SM00448	cheY-homologous receiver domain
AM1_RS22990	SM00073	Histidine Phosphotransfer domain
AM1_RS22990	SM00260	Two component signalling adaptor domain
AM1_RS22990	SM00387	Histidine kinase-like ATPases
AM1_RS22990	SM00448	cheY-homologous receiver domain
AM1_RS22990	SM01231	AM1_RS22990
AM1_RS22995	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM1_RS23000	SM00260	Two component signalling adaptor domain
AM1_RS23005	SM00448	cheY-homologous receiver domain
AM1_RS23010	SM00448	cheY-homologous receiver domain
AM1_RS23040	SM00052	Putative diguanylate phosphodiesterase
AM1_RS23040	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS23040	SM00267	diguanylate cyclase
AM1_RS23080	SM00448	cheY-homologous receiver domain
AM1_RS23080	SM00862	Transcriptional regulatory protein, C terminal
AM1_RS23130	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS23130	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM1_RS23130	SM00091	PAS domain
AM1_RS23130	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS23130	SM00387	Histidine kinase-like ATPases
AM1_RS23130	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS23130	SM00448	cheY-homologous receiver domain
AM1_RS23135	SM00387	Histidine kinase-like ATPases
AM1_RS23135	SM00448	cheY-homologous receiver domain
AM1_RS23180	SM00052	Putative diguanylate phosphodiesterase
AM1_RS23180	SM00267	diguanylate cyclase
AM1_RS23190	SM00382	ATPases associated with a variety of cellular activities
AM1_RS23250	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS23250	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS23250	SM00387	Histidine kinase-like ATPases
AM1_RS23250	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS23250	SM00448	cheY-homologous receiver domain
AM1_RS23275	SM00100	Cyclic nucleotide-monophosphate binding domain
AM1_RS23275	SM00419	helix_turn_helix, cAMP Regulatory protein
AM1_RS23280	SM00360	RNA recognition motif
AM1_RS23300	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS23300	SM00387	Histidine kinase-like ATPases
AM1_RS23300	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS23315	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AM1_RS23320	SM00487	DEAD-like helicases superfamily
AM1_RS23320	SM00490	helicase superfamily c-terminal domain
AM1_RS23350	SM00028	Tetratricopeptide repeats
AM1_RS23350	SM00255	Toll - interleukin 1 - resistance
AM1_RS23375	SM00998	Adenylosuccinate lyase C-terminus
AM1_RS23380	SM01116	AM1_RS23380
AM1_RS23385	SM00382	ATPases associated with a variety of cellular activities
AM1_RS23400	SM00342	helix_turn_helix, arabinose operon control protein
AM1_RS23400	SM00448	cheY-homologous receiver domain
AM1_RS23405	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM1_RS23405	SM00091	PAS domain
AM1_RS23405	SM00387	Histidine kinase-like ATPases
AM1_RS23405	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS23460	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS23485	SM00861	Transketolase, pyrimidine binding domain
AM1_RS23515	SM00240	Forkhead associated domain
AM1_RS23520	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AM1_RS23535	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AM1_RS23540	SM00535	Ribonuclease III family
AM1_RS23560	SM00470	ParB-like nuclease domain
AM1_RS23610	SM00052	Putative diguanylate phosphodiesterase
AM1_RS23610	SM00267	diguanylate cyclase
AM1_RS23610	SM00448	cheY-homologous receiver domain
AM1_RS23665	SM00487	DEAD-like helicases superfamily
AM1_RS23665	SM00490	helicase superfamily c-terminal domain
AM1_RS23675	SM00052	Putative diguanylate phosphodiesterase
AM1_RS23675	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS23675	SM00240	Forkhead associated domain
AM1_RS23675	SM00267	diguanylate cyclase
AM1_RS23680	SM00049	Domain found in Dishevelled, Egl-10, and Pleckstrin
AM1_RS23785	SM00028	Tetratricopeptide repeats
AM1_RS23805	SM00838	Elongation factor G C-terminus
AM1_RS23830	SM00387	Histidine kinase-like ATPases
AM1_RS23830	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS23835	SM00448	cheY-homologous receiver domain
AM1_RS23835	SM00862	Transcriptional regulatory protein, C terminal
AM1_RS23885	SM00382	ATPases associated with a variety of cellular activities
AM1_RS23900	SM00460	Transglutaminase/protease-like homologues
AM1_RS23940	SM00244	prohibitin homologues
AM1_RS23990	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS24015	SM00091	PAS domain
AM1_RS24015	SM00387	Histidine kinase-like ATPases
AM1_RS24015	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS24015	SM00448	cheY-homologous receiver domain
AM1_RS24035	SM00933	AM1_RS24035
AM1_RS24040	SM00287	Bacterial SH3 domain homologues
AM1_RS24040	SM00646	AM1_RS24040
AM1_RS24090	SM00320	WD40 repeats
AM1_RS24110	SM00382	ATPases associated with a variety of cellular activities
AM1_RS24175	SM00506	Appr-1"-p processing enzyme
AM1_RS24225	SM00240	Forkhead associated domain
AM1_RS24250	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS24250	SM00240	Forkhead associated domain
AM1_RS24255	SM00331	Sigma factor PP2C-like phosphatases
AM1_RS24255	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AM1_RS24300	SM00382	ATPases associated with a variety of cellular activities
AM1_RS24360	SM00877	AM1_RS24360
AM1_RS24365	SM00877	AM1_RS24365
AM1_RS24375	SM00961	Ribulose bisphosphate carboxylase, small chain
AM1_RS24385	SM00877	AM1_RS24385
AM1_RS24390	SM00788	Adenylosuccinate synthetase
AM1_RS24400	SM00028	Tetratricopeptide repeats
AM1_RS24420	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AM1_RS24420	SM00851	MGS-like domain
AM1_RS24505	SM00849	Metallo-beta-lactamase superfamily
AM1_RS24510	SM00851	MGS-like domain
AM1_RS24510	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AM1_RS24525	SM01321	AM1_RS24525
AM1_RS24545	SM01387	AM1_RS24545
AM1_RS24620	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AM1_RS24635	SM00116	Domain in cystathionine beta-synthase and other proteins.
AM1_RS24660	SM00116	Domain in cystathionine beta-synthase and other proteins.
AM1_RS24665	SM00028	Tetratricopeptide repeats
AM1_RS24670	SM00382	ATPases associated with a variety of cellular activities
AM1_RS24755	SM00028	Tetratricopeptide repeats
AM1_RS24760	SM00342	helix_turn_helix, arabinose operon control protein
AM1_RS24765	SM00320	WD40 repeats
AM1_RS24800	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS24820	SM00382	ATPases associated with a variety of cellular activities
AM1_RS24855	SM00938	Nitrogen regulatory protein P-II
AM1_RS24875	SM00072	Guanylate kinase homologues.
AM1_RS24905	SM00028	Tetratricopeptide repeats
AM1_RS24960	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM1_RS24980	SM00861	Transketolase, pyrimidine binding domain
AM1_RS24985	SM00825	Beta-ketoacyl synthase
AM1_RS25005	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS25010	SM00387	Histidine kinase-like ATPases
AM1_RS25010	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS25015	SM00487	DEAD-like helicases superfamily
AM1_RS25015	SM00490	helicase superfamily c-terminal domain
AM1_RS25055	SM00387	Histidine kinase-like ATPases
AM1_RS25055	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS25060	SM00448	cheY-homologous receiver domain
AM1_RS25060	SM00862	Transcriptional regulatory protein, C terminal
AM1_RS25080	SM00028	Tetratricopeptide repeats
AM1_RS25110	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM1_RS25125	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AM1_RS25125	SM00245	tail specific protease
AM1_RS25130	SM00100	Cyclic nucleotide-monophosphate binding domain
AM1_RS25145	SM00360	RNA recognition motif
AM1_RS25195	SM00052	Putative diguanylate phosphodiesterase
AM1_RS25195	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM1_RS25195	SM00091	PAS domain
AM1_RS25195	SM00240	Forkhead associated domain
AM1_RS25195	SM00267	diguanylate cyclase
AM1_RS25275	SM00028	Tetratricopeptide repeats
AM1_RS25290	SM00195	Dual specificity phosphatase, catalytic domain
AM1_RS25295	SM00341	Helicase and RNase D C-terminal
AM1_RS25295	SM00487	DEAD-like helicases superfamily
AM1_RS25295	SM00490	helicase superfamily c-terminal domain
AM1_RS25295	SM00956	AM1_RS25295
AM1_RS25320	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AM1_RS25320	SM00534	ATPase domain of DNA mismatch repair MUTS family
AM1_RS25350	SM00382	ATPases associated with a variety of cellular activities
AM1_RS25360	SM00382	ATPases associated with a variety of cellular activities
AM1_RS25365	SM00331	Sigma factor PP2C-like phosphatases
AM1_RS25365	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AM1_RS25410	SM00028	Tetratricopeptide repeats
AM1_RS25435	SM00052	Putative diguanylate phosphodiesterase
AM1_RS25435	SM00267	diguanylate cyclase
AM1_RS25435	SM00448	cheY-homologous receiver domain
AM1_RS25440	SM00062	Bacterial periplasmic substrate-binding proteins
AM1_RS25475	SM00822	AM1_RS25475
AM1_RS25485	SM00822	AM1_RS25485
AM1_RS25500	SM00267	diguanylate cyclase
AM1_RS25500	SM00448	cheY-homologous receiver domain
AM1_RS25505	SM00387	Histidine kinase-like ATPases
AM1_RS25505	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS25505	SM01080	AM1_RS25505
AM1_RS25520	SM00028	Tetratricopeptide repeats
AM1_RS25520	SM00912	haemagglutination activity domain
AM1_RS25605	SM00382	ATPases associated with a variety of cellular activities
AM1_RS25610	SM00448	cheY-homologous receiver domain
AM1_RS25610	SM00862	Transcriptional regulatory protein, C terminal
AM1_RS25625	SM00100	Cyclic nucleotide-monophosphate binding domain
AM1_RS25715	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS25720	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM1_RS25720	SM00091	PAS domain
AM1_RS25720	SM00387	Histidine kinase-like ATPases
AM1_RS25720	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS25720	SM00448	cheY-homologous receiver domain
AM1_RS25745	SM00271	DnaJ molecular chaperone homology domain
AM1_RS25780	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS25780	SM00287	Bacterial SH3 domain homologues
AM1_RS25800	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS25800	SM00387	Histidine kinase-like ATPases
AM1_RS25800	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS25800	SM00448	cheY-homologous receiver domain
AM1_RS25875	SM00382	ATPases associated with a variety of cellular activities
AM1_RS25935	SM00434	DNA Topoisomerase IV
AM1_RS25955	SM00028	Tetratricopeptide repeats
AM1_RS26000	SM00382	ATPases associated with a variety of cellular activities
AM1_RS26010	SM01329	AM1_RS26010
AM1_RS26020	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS26045	SM00984	UDP binding domain
AM1_RS26120	SM00877	AM1_RS26120
AM1_RS26125	SM00798	AICARFT/IMPCHase bienzyme
AM1_RS26125	SM00851	MGS-like domain
AM1_RS26145	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS26155	SM00382	ATPases associated with a variety of cellular activities
AM1_RS26170	SM00849	Metallo-beta-lactamase superfamily
AM1_RS26175	SM00710	Parallel beta-helix repeats
AM1_RS26210	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM1_RS26220	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AM1_RS26270	SM00989	AM1_RS26270
AM1_RS26280	SM00989	AM1_RS26280
AM1_RS26395	SM00342	helix_turn_helix, arabinose operon control protein
AM1_RS26430	SM00267	diguanylate cyclase
AM1_RS26430	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM1_RS26435	SM00052	Putative diguanylate phosphodiesterase
AM1_RS26435	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS26435	SM00267	diguanylate cyclase
AM1_RS26555	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM1_RS26565	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS26565	SM00448	cheY-homologous receiver domain
AM1_RS26565	SM00911	HWE histidine kinase
AM1_RS26570	SM00448	cheY-homologous receiver domain
AM1_RS26575	SM00448	cheY-homologous receiver domain
AM1_RS26580	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM1_RS26580	SM00091	PAS domain
AM1_RS26580	SM00387	Histidine kinase-like ATPases
AM1_RS26580	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS26585	SM00347	helix_turn_helix multiple antibiotic resistance protein
AM1_RS26620	SM00411	bacterial (prokaryotic) histone like domain
AM1_RS26660	SM00244	prohibitin homologues
AM1_RS26685	SM00316	Ribosomal protein S1-like RNA-binding domain
AM1_RS26685	SM00322	K homology RNA-binding domain
AM1_RS26690	SM00487	DEAD-like helicases superfamily
AM1_RS26690	SM00490	helicase superfamily c-terminal domain
AM1_RS26695	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
AM1_RS26700	SM00387	Histidine kinase-like ATPases
AM1_RS26700	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS26710	SM00448	cheY-homologous receiver domain
AM1_RS26715	SM00387	Histidine kinase-like ATPases
AM1_RS26740	SM00028	Tetratricopeptide repeats
AM1_RS26740	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS26760	SM00382	ATPases associated with a variety of cellular activities
AM1_RS26785	SM00382	ATPases associated with a variety of cellular activities
AM1_RS26810	SM00530	Helix-turn-helix XRE-family like proteins 
AM1_RS26870	SM00267	diguanylate cyclase
AM1_RS26870	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM1_RS26905	SM00028	Tetratricopeptide repeats
AM1_RS26925	SM01080	AM1_RS26925
AM1_RS26940	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS26940	SM00387	Histidine kinase-like ATPases
AM1_RS26940	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS26940	SM00448	cheY-homologous receiver domain
AM1_RS26945	SM00073	Histidine Phosphotransfer domain
AM1_RS26945	SM00387	Histidine kinase-like ATPases
AM1_RS26945	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS26945	SM00448	cheY-homologous receiver domain
AM1_RS26950	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM1_RS26950	SM00091	PAS domain
AM1_RS26950	SM00331	Sigma factor PP2C-like phosphatases
AM1_RS26950	SM00448	cheY-homologous receiver domain
AM1_RS26955	SM00989	AM1_RS26955
AM1_RS26970	SM00198	SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains.
AM1_RS27005	SM00382	ATPases associated with a variety of cellular activities
AM1_RS27010	SM00382	ATPases associated with a variety of cellular activities
AM1_RS27040	SM00834	Putative regulatory protein
AM1_RS27100	SM00419	helix_turn_helix, cAMP Regulatory protein
AM1_RS27140	SM00320	WD40 repeats
AM1_RS27245	SM00382	ATPases associated with a variety of cellular activities
AM1_RS27300	SM00382	ATPases associated with a variety of cellular activities
AM1_RS27315	SM00091	PAS domain
AM1_RS27315	SM00267	diguanylate cyclase
AM1_RS27370	SM00028	Tetratricopeptide repeats
AM1_RS27375	SM00387	Histidine kinase-like ATPases
AM1_RS27375	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS27385	SM00448	cheY-homologous receiver domain
AM1_RS27390	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS27390	SM00387	Histidine kinase-like ATPases
AM1_RS27390	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS27390	SM00448	cheY-homologous receiver domain
AM1_RS27395	SM00320	WD40 repeats
AM1_RS27430	SM00028	Tetratricopeptide repeats
AM1_RS27440	SM00829	Enoylreductase
AM1_RS27455	SM00421	helix_turn_helix, Lux Regulon
AM1_RS27460	SM00028	Tetratricopeptide repeats
AM1_RS27460	SM00421	helix_turn_helix, Lux Regulon
AM1_RS27525	SM00829	Enoylreductase
AM1_RS27560	SM00342	helix_turn_helix, arabinose operon control protein
AM1_RS27685	SM00342	helix_turn_helix, arabinose operon control protein
AM1_RS27760	SM00382	ATPases associated with a variety of cellular activities
AM1_RS27840	SM00411	bacterial (prokaryotic) histone like domain
AM1_RS27880	SM00530	Helix-turn-helix XRE-family like proteins 
AM1_RS27955	SM00267	diguanylate cyclase
AM1_RS27980	SM00448	cheY-homologous receiver domain
AM1_RS27980	SM00862	Transcriptional regulatory protein, C terminal
AM1_RS27985	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM1_RS27985	SM00387	Histidine kinase-like ATPases
AM1_RS27985	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS28030	SM00530	Helix-turn-helix XRE-family like proteins 
AM1_RS28050	SM00320	WD40 repeats
AM1_RS28055	SM00320	WD40 repeats
AM1_RS28090	SM00342	helix_turn_helix, arabinose operon control protein
AM1_RS28100	SM00829	Enoylreductase
AM1_RS28115	SM00382	ATPases associated with a variety of cellular activities
AM1_RS28120	SM00710	Parallel beta-helix repeats
AM1_RS28220	SM00240	Forkhead associated domain
AM1_RS28295	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS28295	SM00387	Histidine kinase-like ATPases
AM1_RS28330	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS28355	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AM1_RS28360	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS28360	SM00387	Histidine kinase-like ATPases
AM1_RS28360	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS28360	SM00448	cheY-homologous receiver domain
AM1_RS28365	SM00448	cheY-homologous receiver domain
AM1_RS28370	SM00530	Helix-turn-helix XRE-family like proteins 
AM1_RS28375	SM00421	helix_turn_helix, Lux Regulon
AM1_RS28390	SM00028	Tetratricopeptide repeats
AM1_RS28395	SM00421	helix_turn_helix, Lux Regulon
AM1_RS28395	SM00448	cheY-homologous receiver domain
AM1_RS28405	SM00342	helix_turn_helix, arabinose operon control protein
AM1_RS28410	SM00342	helix_turn_helix, arabinose operon control protein
AM1_RS28420	SM01350	AM1_RS28420
AM1_RS28460	SM00028	Tetratricopeptide repeats
AM1_RS28465	SM00028	Tetratricopeptide repeats
AM1_RS28470	SM00448	cheY-homologous receiver domain
AM1_RS28470	SM00862	Transcriptional regulatory protein, C terminal
AM1_RS28475	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM1_RS28475	SM00387	Histidine kinase-like ATPases
AM1_RS28475	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS28485	SM00831	Cation transporter/ATPase, N-terminus
AM1_RS28500	SM01080	AM1_RS28500
AM1_RS28525	SM00230	Calpain-like thiol protease family.
AM1_RS28555	SM00173	Ras subfamily of RAS small GTPases
AM1_RS28555	SM00175	Rab subfamily of small GTPases
AM1_RS28590	SM00387	Histidine kinase-like ATPases
AM1_RS28590	SM00448	cheY-homologous receiver domain
AM1_RS28595	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS28595	SM00091	PAS domain
AM1_RS28595	SM00387	Histidine kinase-like ATPases
AM1_RS28595	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS28595	SM00448	cheY-homologous receiver domain
AM1_RS28600	SM00387	Histidine kinase-like ATPases
AM1_RS28600	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS28600	SM00448	cheY-homologous receiver domain
AM1_RS28620	SM00822	AM1_RS28620
AM1_RS28625	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS28635	SM00530	Helix-turn-helix XRE-family like proteins 
AM1_RS28650	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
AM1_RS28670	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM1_RS28670	SM00387	Histidine kinase-like ATPases
AM1_RS28670	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS28680	SM00855	Phosphoglycerate mutase family
AM1_RS28705	SM00382	ATPases associated with a variety of cellular activities
AM1_RS28730	SM00448	cheY-homologous receiver domain
AM1_RS28735	SM00448	cheY-homologous receiver domain
AM1_RS28735	SM00862	Transcriptional regulatory protein, C terminal
AM1_RS28750	SM00872	Alpha mannosidase, middle domain
AM1_RS28790	SM00320	WD40 repeats
AM1_RS28795	SM00100	Cyclic nucleotide-monophosphate binding domain
AM1_RS28835	SM00116	Domain in cystathionine beta-synthase and other proteins.
AM1_RS29065	SM00369	Leucine-rich repeats, typical (most populated) subfamily
AM1_RS29735	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS32360	SM00091	PAS domain
AM1_RS32905	SM00320	WD40 repeats
AM1_RS32940	SM00320	WD40 repeats
AM1_RS33080	SM00387	Histidine kinase-like ATPases
AM1_RS33705	SM00364	Leucine-rich repeats, bacterial type
AM1_RS33705	SM00369	Leucine-rich repeats, typical (most populated) subfamily
AM1_RS35725	SM00387	Histidine kinase-like ATPases
AM1_RS35725	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS36380	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS36435	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS36435	SM00091	PAS domain
AM1_RS36765	SM00487	DEAD-like helicases superfamily
AM1_RS37350	SM00710	Parallel beta-helix repeats
AM1_RS37405	SM00028	Tetratricopeptide repeats
AM1_RS37410	SM00387	Histidine kinase-like ATPases
AM1_RS37410	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS37410	SM00448	cheY-homologous receiver domain
AM1_RS37440	SM00387	Histidine kinase-like ATPases
AM1_RS37440	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS37440	SM00448	cheY-homologous receiver domain
AM1_RS37445	SM00387	Histidine kinase-like ATPases
AM1_RS37445	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS37485	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS37485	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM1_RS37485	SM00091	PAS domain
AM1_RS37485	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS37485	SM00387	Histidine kinase-like ATPases
AM1_RS37485	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS37485	SM00448	cheY-homologous receiver domain
AM1_RS37490	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS37490	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM1_RS37490	SM00091	PAS domain
AM1_RS37490	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS37490	SM00387	Histidine kinase-like ATPases
AM1_RS37490	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS37490	SM00448	cheY-homologous receiver domain
AM1_RS37535	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
AM1_RS37535	SM01225	AM1_RS37535
AM1_RS37540	SM00387	Histidine kinase-like ATPases
AM1_RS37565	SM00198	SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains.
AM1_RS37575	SM00052	Putative diguanylate phosphodiesterase
AM1_RS37605	SM00267	diguanylate cyclase
AM1_RS37610	SM00098	Alkaline phosphatase homologues
AM1_RS37625	SM00220	Serine/Threonine protein kinases, catalytic domain
AM1_RS37630	SM00342	helix_turn_helix, arabinose operon control protein
AM1_RS37635	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS37635	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM1_RS37635	SM00091	PAS domain
AM1_RS37635	SM00387	Histidine kinase-like ATPases
AM1_RS37635	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS37640	SM00028	Tetratricopeptide repeats
AM1_RS37640	SM00382	ATPases associated with a variety of cellular activities
AM1_RS37655	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM1_RS37655	SM00091	PAS domain
AM1_RS37655	SM00387	Histidine kinase-like ATPases
AM1_RS37655	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS37655	SM01079	AM1_RS37655
AM1_RS37675	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
AM1_RS37705	SM00448	cheY-homologous receiver domain
AM1_RS37715	SM00052	Putative diguanylate phosphodiesterase
AM1_RS37715	SM00267	diguanylate cyclase
AM1_RS37715	SM00448	cheY-homologous receiver domain
AM1_RS37735	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
AM1_RS37740	SM00052	Putative diguanylate phosphodiesterase
AM1_RS37740	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS37740	SM00267	diguanylate cyclase
AM1_RS37765	SM00028	Tetratricopeptide repeats
AM1_RS37775	SM00342	helix_turn_helix, arabinose operon control protein
AM1_RS37785	SM00116	Domain in cystathionine beta-synthase and other proteins.
AM1_RS37785	SM00387	Histidine kinase-like ATPases
AM1_RS37785	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS37785	SM00448	cheY-homologous receiver domain
AM1_RS37835	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM1_RS37835	SM00091	PAS domain
AM1_RS37835	SM00138	Methyltransferase, chemotaxis proteins 
AM1_RS37835	SM00387	Histidine kinase-like ATPases
AM1_RS37835	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS37840	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM1_RS37840	SM00116	Domain in cystathionine beta-synthase and other proteins.
AM1_RS37840	SM00387	Histidine kinase-like ATPases
AM1_RS37840	SM00388	His Kinase A (phosphoacceptor) domain
AM1_RS37840	SM00448	cheY-homologous receiver domain
