        yaaA NONE
        recF    4144 ..    4156 +  -3.5  -4.24404   TATAAAACGGTTGAG                TTTTA ATA TAAAA                TTTTGAAATTTGCAT  58 138
LQRI_RS00025 NONE
        gyrB    6500 ..    6513 +  -8.1  -6.47325   AATTTAATTATAAAA               CAGGG TTAT CCCTG                TTTTTTTTCTTTTTT 100 39
LQRI_RS00035 NONE
LQRI_RS00040    9243 ..    9256 +  -3.9  -4.43307   TATATGGCAGAATAT               TTAGT GAGA ACTAA                TTATTTTATTAAAAA  62 153
LQRI_RS00045 NONE
LQRI_RS00050 NONE
        serS   12411 ..   12423 +  -4.1   -3.5774   TCTCTTAAACAGAAG                TACCT GCA GGGTA                TTTAGGGAATTCAGT  53 54
LQRI_RS00060 NONE
LQRI_RS00065   12849 ..   12888 + -21.2  -4.10717   TCCCTCCTTCTCCGC  CAAATAAAAGCATTCCAT TATT ATGGAATGCTTTTATTTG   TTGTTTACCTTTTTA 100 24
LQRI_RS00085   17193 ..   17215 +  -6.2  -4.90079   AACTGTAAATAAAAA           GCGAAGGG CTTATTT CCCCTCGC           TTTTATTATTGGAAT  80 77
LQRI_RS00100 NONE
LQRI_RS00105 NONE
LQRI_RS00110 NONE
LQRI_RS00115 NONE
        porA NONE
LQRI_RS00125   24877 ..   24898 +  -6.5  -3.89215   AAATGATAATAAAAA           GACCTGGGT TTTG GCCTGGGTC            TTTAAATTTGTAAAA  66 55
LQRI_RS00140   27941 ..   27958 +  -2.7  -6.34616   AAGTAAAAATAAAAA             GATACTT GTGG GAGTGTC              TTTTTTTTATTTTGG  87 144
LQRI_RS00145   29212 ..   29228 +  -5.9  -2.53233   GAGGGAGAAAATCCG              GTTCTAA TTT TTAGGAC              GTGTTAATATGATTA  54 19
LQRI_RS00150   30401 ..   30427 +  -8.8  -3.57144   AATAAAAAATTTAGA        GCCCAATGGGA AGAAAA TCCCAT-GGGC         TTTGGGCGTAAGCGC  77 77
        yabG   33232 ..   33248 +  -2.3  -3.46783   AATGTTGATGAAAAA              TTGATTA ATA TCATCAA              TATTTAGGTTAACTG  46 84
LQRI_RS00165   33737 ..   33776 +   -24  -4.60487   AATCTTACTTAAAAA  GCATAAAAGAACCGAATC GCAA GATTCGGTTCTTTTATGC   TTTTTAAAAATAGTG 100 88
LQRI_RS00170   35556 ..   35578 + -12.8  -5.24531   TTTTATCAAATTAAG           GTCCGAAGTC GAA GATTTCGGAC           TTTTTTGTGCGAAAT 100 62
        ispE NONE
LQRI_RS00180   37399 ..   37421 + -11.3  -3.90038   AAAATATGAAGGGAG           GTGGAGGGG AATAA CCTCTCCAC           TTTAAATTATTTCAT  95 12
LQRI_RS00190   38357 ..   38367 +  -2.6  -2.89534   GACAAGTAGTGAACT                 TTTT CAA AAAA                 TATCGTATAATTACT  42 32
LQRI_RS00195 NONE
LQRI_RS00200   40899 ..   40921 +    -7  -4.25104   TTGTAAATTAAAACA           CACACTCC CAAAGAA GGGGTGTG           TTTTGCTAAGAGGGG  74 49
LQRI_RS00205 NONE
LQRI_RS00210 NONE
LQRI_RS00215 NONE
LQRI_RS00220   47481 ..   47501 +  -2.5  -2.94771   CTTGTTGAACTTTTC            GAAAAACGA TTA TCGGTTTGC            ATGTTGTTTTTATTT  42 33
LQRI_RS00225   48996 ..   49014 +  -8.2  -2.77431   ATAATTTGGATGTCC             CTTTTGCA TTT TGCAAAGG             ATTTGAAGGTATTTT  67 465
        sleB   50619 ..   50629 +  -5.4  -2.87132   AATATGATTGGGAAA                 CTGA TTT TCAG                 TATATAAACAGGAGG  53 34
        ypeB   52047 ..   52074 +  -8.5  -4.80487   GAGTACTGACAATGT        AAATCGGGCAA GCAAAA TTGCCCGATTA         TTTGTTTTACTTCTG  93 24
LQRI_RS00250   53646 ..   53669 +  -3.1  -4.25104   AAAAATGTCGGAATA          GGCGGTG TCTTCAAATT CACCGTC           TTTTAGTGCCGACAG  59 371
LQRI_RS00265   55719 ..   55760 + -12.6  -4.42235   TCCTCTTGGGCGCGC CA-GATAAGGCAGCTGATC GTTGG GATTAGCTGCCTTATTGTG TTGTTTTTGACAGTT 100 24
LQRI_RS00270 NONE
LQRI_RS00275   58101 ..   58142 +  -8.9  -4.74084   TTTGCTTTATATAAA TAAAACAGGAGTTGTGGAA CATA TTTTTCAACTCCTGCTTTA  TTTTCGTTTTAATTT  93 94
LQRI_RS00295   64684 ..   64696 +  -4.8  -2.91582   AAAGAAGTGAAAAAG                GCAG AGAAG CTGC                TGTGTAAGTGAGGTG  51 6
LQRI_RS00300   65543 ..   65571 +  -6.2  -5.95539   ATTAAAATAATAAAA       GGCTTTATGA-CA ACTT TGCTCATAAAGTC        TTTTTTTGTTTCCGA 100 51
LQRI_RS00305 NONE
        prmC   68114 ..   68130 +  -2.3  -2.71924   TCGCTTTTAATCCCG              ATAAAAC CTT GTTTTAG              ATTTACGGGAAGCTG  40 479
        rsxC NONE
LQRI_RS00325 NONE
LQRI_RS00330 NONE
LQRI_RS00335 NONE
        rsxA NONE
LQRI_RS00345   74332 ..   74349 + -11.3  -3.44444   TTCTTTTGACATAAA             GCTCAGC GGAT GCTGAGC              TTAATATATTTGTAA  90 66
LQRI_RS00355   75402 ..   75426 +    -5  -5.80248   TGACCCCCTTTACAT          CGGTTAGTCT CTTGA GGACTAACCC          TTTTTTTATGTGTTA  90 122
LQRI_RS15900   75768 ..   75782 +  -2.1  -3.47475   TCATGGGAAGTCAAA               CTGGA ACGTC TCTAG               TCTTGTTGAATTTGT  46 11
LQRI_RS00360   76294 ..   76309 +  -2.6  -2.72144   GATAAGCAAATTGGA              TTGAAA CTTT TTTCGA               ATTTAAGAAGAATAA  40 22
LQRI_RS00365   76903 ..   76921 + -12.4    -3.182   AATTAAAACAAAATA             CCCGGGTG AAA TACCCGGG             TTAAATAATTTATAT  90 52
        glpK NONE
LQRI_RS00380 NONE
LQRI_RS00385 NONE
LQRI_RS00390 NONE
LQRI_RS00395 NONE
LQRI_RS00400 NONE
LQRI_RS00405 NONE
LQRI_RS00410   86838 ..   86870 + -10.2  -5.95946   AGATACACAATCAAA      TTGATTTTATTGAT TTTGT GTCAATAAAATCAA      TTTTTTTGTTGTTGG 100 22
LQRI_RS15960   87843 ..   87876 +  -8.3  -2.90078   CGGTAAGATTCAAGC     CTGTTCCTCCTGCTTT TAA AGAG-ATGAGGAACAG     CTTTCCTGTGCCCTG  66 300
LQRI_RS00440   96878 ..   96912 + -14.5  -3.27476   CCTTTGGGCACACCA     GAAAAGCCGTTAACC ATTCA GGTTGATGGCTTTTC     TAATTTTTAACTCTA 100 26
        tadA   97621 ..   97638 +  -2.7    -4.788   CTTAGAAAAAGAAAG             TCAAATC GGAA GATATGA              TTTTTAAGTTGATTT  63 8
LQRI_RS00450   97835 ..   97869 + -17.3  -4.88163   CACCGTCTCCGCCAC     GAACCTGTTTGCGGG AAATA TCCGCAGACAGGTTC     TTTATTTTATGTTAA 100 27
LQRI_RS00455 NONE
LQRI_RS00460   98753 ..   98785 +  -9.2  -4.27117   TCGTACTCCAAATTT      CATGGCGGATTCAT TTACT ATGGATTCGCCAGG      TTTGTCTTCTCCGAA  85 96
LQRI_RS00475  104993 ..  105048 + -11.7  -4.39998   ATTTATGTTAACAAG CCTCCTATGAAGATTTATTTGCATATT ATGC AATATGCAAAT-A-TCTTTGTAGGGGG TTTATTATGTCAATG 100 148
LQRI_RS00485  105885 ..  105895 +  -2.4  -5.04175   ATAACCGTGCGAAAG                 GCTG GTA CTGC                 TTTTTCTATGGTTGA  66 40
LQRI_RS00490  108194 ..  108212 +    -6   -4.0641   TAAAAAGGAGGTGTA             CACACC GGTAAAA GGTGTG             TTTGTGTAGATGAAG  67 247
LQRI_RS00495  109131 ..  109159 +  -7.3  -5.13473   AAAAAAGAGAAAGAA        GCAGCTTCGGATA AAA TTTCCGTTGCTGC        TTTTTTGAATGTGGT  91 77
LQRI_RS00500  110509 ..  110526 +  -4.3  -3.07291   GTATTTAATAAAGTA             TTTAATA AAAA TATTAAA              TTGAATGAAATAATT  50 176
LQRI_RS00505  110771 ..  110796 +    -2  -4.24443   GACTTATAAAGCATA         TCCAAAAAAA GATTTA TTTTTTTGAA          TTCTTTTAGAGTTTT  54 32
LQRI_RS00510 NONE
LQRI_RS00515 NONE
LQRI_RS00520  113292 ..  113339 +  -9.2  -4.27483   CCACGTTGGACATAA TCCCTTCGTCCCTGCAGACA ATAGAACA TGTTTGCGGAGATGAGGGGG TTTAATTTTATAAAT  88 274
        ilvB  115046 ..  115056 +  -5.4  -3.24017   ACCCGGAAGAATCAA                 CACT ATG AGTG                 TTCAATTATAGAATT  56 18
        ilvN NONE
        ilvC  116618 ..  116650 + -14.3   -3.3341   AGATTAAAAGGCTGA      TTCCCGACCTTCC CTTTTGA GGAAGGTTGGGAA      TTGTAAAGCATTTTT 100 43
        cimA NONE
LQRI_RS00545  118587 ..  118604 +  -4.3  -2.84195   TTTTGTTAAATCTAA             TAATTTT ACAA AAAATTA              CTTCATTTTGGTCTT  49 52
        sigI NONE
LQRI_RS00555  121106 ..  121159 + -17.3  -4.08706   CCAAGCGACAATAAC CGTTGCCGGTTTTTAATTAAGTTT ATCTGTG AAACTTAATTAA-AACCGGCAATG TTTATATAATACGAA 100 46
LQRI_RS00560  121699 ..  121735 + -11.1  -3.27382   CTCATCACTTTAAAT    TAAACCAAGTGCTCTAT CAG ATAAAGTGCTTGGTTTA    TATATGTTTATTCAA  85 65
LQRI_RS00565 NONE
        hemA NONE
LQRI_RS00575 NONE
        hemC NONE
        cobA  126579 ..  126593 +  -2.8  -2.91276   ATTTGCAAAGTAAGG               ATTTGC AAA GCAAAA               ATTTGTAAACCAAAG  42 203
        hemB NONE
        hemL  129153 ..  129173 +  -8.4  -3.16068   ATAGTGTGATATAAA            TTAAAGGG GATGA CCCTTTAA            ATTTTAACTTAAAAC  70 245
LQRI_RS00600 NONE
        cysT NONE
        cysW NONE
LQRI_RS00615  133239 ..  133253 +  -2.8  -3.04183   AGATTTCAAAGTTTT               TATTCC CGA GGATTA               TGTAATTTAGATTGT  43 1
LQRI_RS00620 NONE
LQRI_RS00625 NONE
LQRI_RS00630 NONE
        thiS NONE
        moeB NONE
LQRI_RS00645 NONE
LQRI_RS00650 NONE
LQRI_RS00655  139661 ..  139698 + -13.7  -3.55563   GCAAGGTATGAAAAA   TTATACCGTTC-CTGGCA TTA TGCCAACGAACGGTATAA   TTTGAAAACTAAGAT 100 30
LQRI_RS00685 NONE
LQRI_RS00690  144680 ..  144700 +  -6.2  -5.07652   TATAGGATTTGGAAA           GTCTCA-CC GCAT GGATGAGAC            TTTTATTTTAAAGCA  82 75
LQRI_RS00695 NONE
LQRI_RS15970 NONE
LQRI_RS00700  147732 ..  147759 +   -10  -4.87786   GGGCGCACGCTAAAA        TAGCCAAAGC ACTTTAAA GCTTTGGCTA         TTTTTATGAAATTGG 100 47
        rfbH NONE
        rfbC  160961 ..  160978 +  -6.3  -4.16681   CATGACAGAATTTAT             CCACGAT TTCT ATTGTGG              TTTTGCAATCATCTT  71 385
LQRI_RS00810  173999 ..  174011 +  -4.1  -3.62046   TCATTGCCCGTATAG                TATGC GTA GCGTA                TTATTAAAGCCATGA  53 54
LQRI_RS00825 NONE
LQRI_RS00830 NONE
LQRI_RS00835  178670 ..  178701 + -12.4   -5.1848   TTTACGGGCAAAAAG      GCGGAATTGTGTGG GAAA CCATGCAATTCTGC       TTTTTTCACTTAATT 100 46
LQRI_RS00840  180559 ..  180569 +  -2.6  -4.96468   TTGTAAGCATCACCG                 TTTA CAA TAAA                 TTTTCTTTCGATTTC  68 493
LQRI_RS00855  183803 ..  183814 +    -3  -2.55847   AAATATTTAAAAATA                CTTT CGGG AAAG                 GTTGATATAAGGCTT  42 9
LQRI_RS00860 NONE
        folP NONE
        folB NONE
        folK NONE
LQRI_RS00880 NONE
LQRI_RS00885 NONE
LQRI_RS00890 NONE
LQRI_RS00895 NONE
LQRI_RS00900  190450 ..  190502 + -13.9  -2.96692   CATGCATTTAAAGAC TATTGAACGCATATTCAGAAA-CA CCGGTT TGCTTTCTGGATATGCGTTCAAAA TATATCATGATGATA 100 54
LQRI_RS00910  194240 ..  194259 + -12.2  -5.62552   CGGTAAAGCTGAAAG            GATCGGGA GAAA TCCCGATC             TTTTTTCATTTTTTT 100 68
LQRI_RS00915 NONE
LQRI_RS16365 NONE
        prfA  196606 ..  196618 +  -3.5  -3.74747   AAAAAAACAGGGGGA                TAATT GTG AATTA                TTTGATGAAAGTTAC  52 87
LQRI_RS00930  197402 ..  197422 +  -4.1  -4.52047   CAAAAATGAGAGAAC            TTTTAAAAG CTT CTTTTATAA            TTTTATAATATAATA  62 76
LQRI_RS00935 NONE
LQRI_RS00940  199116 ..  199133 +  -2.1  -3.38046   TAAGGCAAAGAGGGC             CT-TTTTG TCG CAAAACAG             TCTTTGACATGAGCA  46 55
        rpiB NONE
         upp NONE
LQRI_RS00955 NONE
LQRI_RS00960 NONE
        wecB  203230 ..  203250 +  -4.1  -3.50456   AACTCTGTGGTAATA            TCTTTTTAA ACA TTGAAGAGA            TTGCTATTTAATTAC  51 98
LQRI_RS00970 NONE
        atpE NONE
        atpF NONE
LQRI_RS00985  205711 ..  205724 +  -2.5  -3.71848   TAACGATGCATTATA               TAAAA GTTT TTTTA                TTGTTAGTACAAGGC  48 75
        atpA NONE
        atpG NONE
        atpD NONE
LQRI_RS01005  210226 ..  210247 +  -3.7  -5.68039   AATAATACCAAAAAA           GAAGC-CGTA TTT TCCGTGCTTC           TTTTTTTATGGATTT  79 140
LQRI_RS01010  212419 ..  212429 +  -4.6  -3.00525   ATAATATGACATAAA                 CCTG TTA CGGG                 TCTAATTTGGCAGGA  50 108
LQRI_RS01015 NONE
LQRI_RS01020 NONE
LQRI_RS01025  222596 ..  222608 +  -3.5  -4.39107   TATTGAAATTTTTGT                TAAAA CAT TTTTA                TTTGTTAATTATCTT  61 465
LQRI_RS01030 NONE
        murA  224749 ..  224781 +   -13  -4.09519   AAAATGAAGTACATA     TTAAAGGACGCAAGG ATTC CCTT-CGTCCTTTAA      TTATTTGTAACTCAT 100 105
      spoIID NONE
LQRI_RS01045  226997 ..  227040 + -23.6   -3.0558   AGAGTATTTGAAAAG TTAAAAGCCGGTGAAGCTTA ATAT TAAGCTTTACCGGCTTTTAA TACTTTCTAATGTCC 100 56
     spoIIID  227595 ..  227618 + -12.6   -3.3993   TTGCCAAACAAAACA          TAAAAGTCGG GAAA CCGACTTTTA           ATTTTTGGATAAATA  91 48
LQRI_RS01055  228842 ..  228862 + -13.3  -5.80727   TTTAAAGGCAACTTG            GGCCGGATT TTC AGTCCGGCC            TTTTTTGTTGTTTTT 100 91
LQRI_RS01060 NONE
        flgG NONE
LQRI_RS01070  231008 ..  231021 +  -2.5   -3.1996   ATCCGAATAACCTGT               TTTAA ATGT TTAAA                TTGAATTGCCGTTTA  44 31
LQRI_RS01075  232701 ..  232714 +  -3.1  -4.53705   CATTTTTATTGTAAC               TGTAG CCCA CTGCA                TTTTCTATCAGGATT  60 524
        fabZ  234016 ..  234053 +  -5.5  -5.34381   GTTTAATATAAAAAA   GTCCGAGAAAAACACGA GGCA TCGTGAAATTATCGGAC    TTTTTATTTGGCTTT  84 52
        purR  236726 ..  236740 +  -3.6  -5.64274   GCTGTAGGAAAAACT               TTCATT TTA AATGGA               TTTTTTTATGCATGA  79 34
       spoVG  237587 ..  237613 + -10.4  -3.14522   ATGAAGTAATTGCAG         GATTTCTTTATA AAC TGTAAAGAAATC         TTCAATATGCATTGA  83 413
        glmU NONE
LQRI_RS01110  240255 ..  240290 +   -15  -3.54717   AATATTACAAAATAC    TAAATTGCCTCCTTAA AAAA TTAGGGAGGCAATTTG     TTAGTTGTGATTTTT 100 196
         pth  240937 ..  240951 +  -3.6  -3.39288   TAATGCCAAGAGGTT               TATTCA ATA TGAGTA               TATTATTAAAGGATA  50 45
         mfd  244558 ..  244569 +    -3  -2.61201   ACAAGAGAAATCAAT                TTTC AATT GAAA                 CTGTTATGCTATTTT  42 102
LQRI_RS01125  245784 ..  245818 +  -9.4  -5.69793   ACGGCAAAATAAAAA     GGGGTTGTTTCAGGAT AAA AACTTGAAATAACTCC     TTTTTTATTTGGTAT 100 66
LQRI_RS01130 NONE
LQRI_RS01135  247646 ..  247671 +  -4.2  -3.52093   GATAATCACAAAGTA         TATCAATGCAC CGCCT GTG-ATTGATA         TTATGATTGAAATAT  52 433
LQRI_RS01215  264541 ..  264559 +  -8.2  -4.27584   TTAAAGCTCAAGCCG             CATTTTGC TCC GCAGAATG             TTTTAACTTGCGGCT  83 51
LQRI_RS01220 NONE
LQRI_RS01225 NONE
LQRI_RS01230  266847 ..  266861 +  -2.8  -5.00027   TTTATTATTTATGTT               TTCTGT GTG ACTGAA               TTTTGTCTTTTTCCT  66 56
       spoVT  267781 ..  267810 +  -6.6  -5.11937   TTACATTCTTAAAAA       TAACAGGTAA-CC GTTGA GGATTGCCTGTTA       TTTTTTAAGGTTATT  85 103
        mazG  268807 ..  268828 +  -3.2  -4.14243   TTGCAAAGCATAGCA           TTTATTTT AAATAA AAAATAAA            TTTTCAAATCAAATC  55 113
LQRI_RS01245  269185 ..  269203 +    -6  -5.28942   AAACTGATGCAAAAG             GGCTTC CAGAGGT GAAGCC             TTTTTATTTGACCTC  83 65
LQRI_RS01250  269516 ..  269548 +  -8.7  -5.23765   AAGAAAGCAATAAGG      TAAAAAAGGCATT GAAGAAA GATGCCTTTTTTA      TTTTTGTCTTGTTTA  95 47
        yabP  269926 ..  269938 +  -3.5  -3.06162   TCAAAAGGAATGAGC                TTTTT TGC AAAAA                TGTTCAGATAGGATA  46 2
        yabQ  270534 ..  270544 +  -2.6  -4.28762   ATATTATGTATTGAA                 TAAT TCT ATTA                 TTTTAATACAATTAT  55 86
LQRI_RS01265  270871 ..  270888 +  -8.5  -3.69338   GGTTTTTGTGGATGT             GAATCAG TAGT CTGATTC              TTCTTACCCTTCATT  77 16
LQRI_RS01270  271540 ..  271569 +  -8.8  -4.74453   GTGCATAATATTAAA       GGGACTTTTATT GATGTG AATAAAAGTCTC        TTTTTGAATGTATTA  93 144
LQRI_RS01275 NONE
LQRI_RS01280  271906 ..  271928 + -12.1    -5.626   CAACCAGACAACAGT           CCTGTAAGC ACAAC GCTTACAGG           TTTTTTTATGCAATA 100 35
LQRI_RS01285  273460 ..  273480 +  -7.6  -3.27525   TTTCCAAAATCTCGA            TAAGGCCT TTACC GGGCCTTA            TTAAATTTGAAAGGG  69 86
LQRI_RS01290  275847 ..  275882 + -12.8  -3.22499   TGTTCAAAGTTTAAA    TAACAATGGA-GGGGCA ATG TGCCCCGTCCATTATTA    TGCTTTCTTTATCAA 100 463
LQRI_RS01305  279356 ..  279388 +  -5.1  -3.55842   ATGTTTTATGTAAAA      TTATCTACCATTATT ACA AATAATGATATATAA      TTATAATGTTATGTA  56 66
LQRI_RS01310 NONE
LQRI_RS01315 NONE
LQRI_RS01320  281627 ..  281639 +  -2.7  -3.66784   GCGATATTGGTGATA                CATTA TGG TGATG                TTATATTAAAAATGA  48 235
LQRI_RS01325  282171 ..  282204 +    -4  -3.57561   CTCTGATTGTAGGAG     TACAGTGAATTGTA CCGGAA TATAAATCACTGTG      TTTGACCCCTTCAGA  53 59
LQRI_RS15980  282804 ..  282817 +  -5.3    -4.287   ATAGTTTTACTCCAA               CTGTA GTAA TACAG                TTTTGGGGTTTCTTT  66 325
LQRI_RS01335  283755 ..  283779 +  -2.8  -3.03459   AGAAATTAATTATAA          GGTCAACCAG TGATT TTGGTTGGCG          TCATTTATCGGTATG  43 105
LQRI_RS15985 NONE
LQRI_RS01340  284709 ..  284724 +  -4.6  -3.20361   CGCACAAGTCATCCT              GGCTTC AAAT GTAGCC               TTCAGTTCAACTTTT  52 231
LQRI_RS01345 NONE
LQRI_RS01350  285925 ..  285939 +  -4.2  -5.27779   TATGAGTCACCCAGA               CAGGTA CTT TTCCTG               TTTTTTGCTGTTGGA  74 334
LQRI_RS01355  286662 ..  286682 +  -4.1  -2.77148   TTCTAAAACCATGAT            TGATGTA CAAAAAT TACATCA            TGGTATGTTAATAAA  46 148
LQRI_RS01360  288283 ..  288308 + -14.1  -5.95449   AATATAAACTTATGA         GCGGCAGGTTT TAAA AAACTTGCCGC          TTTTTTATTTTCTTT 100 126
LQRI_RS01365 NONE
LQRI_RS16350  289391 ..  289410 + -13.6  -4.31766   GAAGAAAAGAGAAAA            GAGGCTCG TGAT CGAGCCTC             TTTCTATTCTATAAT 100 268
LQRI_RS01385 NONE
LQRI_RS01390 NONE
LQRI_RS01395  294104 ..  294139 + -13.4  -2.70788   GCCCTATAGTGCCCA    CCAGAACGGTTGTACG TTAT CGTACAGCCGTTTTTG     CCTTTTTATGCATCA 100 23
      spoIIE NONE
LQRI_RS01405 NONE
LQRI_RS01410 NONE
LQRI_RS01415 NONE
LQRI_RS01420  299193 ..  299211 +  -2.4  -6.10489   TGGATACAAAATTAA             TTGAAGAT TAA AGCTTCAG             TTTTTTTTTGCACTT  85 237
        dusB  300335 ..  300346 +    -3  -4.14739   TGCAACTTAATTAGT                TCAA AATA TTGA                 TTTTAAAATACATGG  55 87
        pilM  301553 ..  301569 +  -8.7  -5.23316   TAGTGATTGGCAAAG              CGGCATT TTA GATGCCG              TTTTTTGATGTAATC  95 60
LQRI_RS01435  302183 ..  302198 +  -4.8  -2.50195   TATTCTAAAATTAGA              TATGAT GTTT ATCATA               ATATTGGTCATAAGT  50 76
       spoVB  303837 ..  303854 +  -9.1  -3.83771   AAAGCAGTGAAAGCA             CGGTTCC GCAA GGGACCG              TTTCATAACTTTCTT  81 40
LQRI_RS15995  304813 ..  304825 +  -4.7  -3.54543   AAACACAATATTCTC                GGCAG ACG CAGCC                TTTAACAGGCTGCCT  54 311
LQRI_RS01450 NONE
LQRI_RS01455 NONE
LQRI_RS01460  309026 ..  309038 +  -4.9  -3.86194   AAGCAAAAATAACCG                GATTT TTT AAATC                TTTATAAGGAGAGTT  60 39
LQRI_RS01465 NONE
LQRI_RS01470  311251 ..  311262 +  -2.2  -3.25729   ATATAAAATAAAAGA                CCTT ATGA GAGG                 TTGGTCGTGATTGTA  44 114
LQRI_RS01475 NONE
LQRI_RS01480 NONE
         alr  315053 ..  315063 +    -4  -3.55889   AATTTGACCCGTGCA                 TATC TTA GATA                 TTATAATTAATATAT  51 345
LQRI_RS01490 NONE
LQRI_RS01495 NONE
LQRI_RS01500  316464 ..  316483 +  -8.6   -5.3658   GTTGAGATAAAATAA            GGAGGC-GT TTT ACAGCCTCC            TTTTGTTTTTGTCAT 100 99
LQRI_RS01515  320987 ..  321001 +  -2.2  -3.90729   ACTAAACTATACTAA               TATAAA AAA TTTGTA               TTTGTAGGAGTTGTT  50 108
LQRI_RS01520 NONE
LQRI_RS01525  322833 ..  322862 + -10.7  -5.18355   AACAGTTGAAAATAC       TGCCCGGGTGTGA TTTA TTGCACCCGGGTG        TTTTTGATTTTTAAG 100 56
LQRI_RS01530 NONE
LQRI_RS01535 NONE
LQRI_RS01540 NONE
LQRI_RS01545  327930 ..  327979 + -13.4  -5.71712   TGGTAATTTGAAAAA CAACTCC-TA-CATAGAATTATTC TAGA GAATGATTCTATGGTAAGGAGTTG TTTTTTTGTCTCAGG 100 48
LQRI_RS01550 NONE
LQRI_RS01555 NONE
LQRI_RS01560  331249 ..  331268 + -13.6  -3.85522   TAATAAACAAGACAA            TAGCCGGG CAAA CCCGGCTA             TTATTATAATAAATT 100 181
        ilvD NONE
        ilvB  334987 ..  334999 +  -3.5  -2.64896   AGTTAAAATGAGATA                TTAAA TAA TTTAA                ATATATTTGATTTTT  44 247
        rpmG NONE
        secE NONE
        nusG  336197 ..  336218 +  -2.3   -4.3953   AGCAAATAATAAATC           TCTTTTTGT CAAG GCAGAGAGA            TTTATTATCATTAGA  57 113
        rplK NONE
        rplA  337643 ..  337670 +  -4.1    -5.011   GGATAATGACAATTA        CCCCTTTATGT CTATGT GCATTGAGGGG         TTTTATTATTTCAGT  70 196
        rplJ NONE
        rplL  338780 ..  338832 + -25.4  -3.07962   ATAGGTGACGTTGAT TGACAGATAGCAAAAAGGTTCCTT GAGGG AAGGAGCCTTTTTGCTATCTGTTA TATTAAGATATAAAC 100 47
        rpoB NONE
        rpoC NONE
LQRI_RS01620  346919 ..  346931 +  -2.7   -2.6563   AATTTGTTTGTTTTT                CATTG TTT TAATG                TGGCTTGTTCCGACA  40 39
        rpsL  347551 ..  347564 +  -3.8  -2.85109   GACGACTGAAAGCAG               TCGG CGAGTA CCGA                TGATATTGTCTATAT  47 155
        rpsG  348139 ..  348160 +  -2.3  -3.55444   GTTTTGAAAGGAAGG           TTAAAATGC CCAG GCAATTTAG            TTTAGAGAATACAAG  46 93
        fusA NONE
         tuf  351574 ..  351610 + -13.9  -4.22949   TTTTAGTGTTATATA    TCAAATGGGCCGGAGTA CAA TACTCCGGCTTATTTAA    TTTATGTGTCTTATA 100 44
LQRI_RS01645 NONE
LQRI_RS01650  353023 ..  353047 +  -9.3  -6.04953   AAATTAACAGTGAAA          CGAAGCCCTTC TAT GAAAGGCTTTG          TTTTTTTGTTTATGT 100 34
LQRI_RS01655 NONE
LQRI_RS01660 NONE
LQRI_RS01665 NONE
        ptsP NONE
        uvrC NONE
LQRI_RS01680  359204 ..  359214 +  -2.6  -2.91094   GATTTTCAAGACATA                 TTAT GTT ATAA                 TGTAATGGTTGTTTT  42 54
         tig NONE
        clpP NONE
        clpX NONE
        lonB NONE
        tsaD  365782 ..  365826 +  -6.7  -4.87665   AAGTTGGGTGAGAGG TAAAAAAGCTGTGGA-TAAC TTTTTT GTTAATCCACAGCTGATTTA TTTTTGTGCATGCCG  83 23
LQRI_RS01720 NONE
LQRI_RS01725  369551 ..  369568 +  -7.7  -4.53475   ATATTTTTATATATG             CCCTTTC TCTG GGAAGGG              TTATTTTTATCGGAT  82 137
        smpB  370094 ..  370104 +  -2.6  -2.74514   GATAGATTTGAGTTT                 TATA TTA TATA                 TAATTGAAAATTTAA  40 36
        ssrA NONE
LQRI_RS01740  370917 ..  370931 +  -7.8  -3.78168   CTTCCTAAAAAAACA               CCTCCG CTT TGGAGG               TTGTTCAATGTTTTT  74 159
LQRI_RS01745  371903 ..  371915 +  -3.5  -4.65078   TATACCTGATAAACA                TAATT AGA AATTA                TTTTCTTCGAAATGT  63 32
LQRI_RS16000  372330 ..  372365 +  -3.5  -3.73995   TATGCAAACTTATAA    TTCCTTCTATGTT AGAATACAAA AGTATAGAAGGAA     ATTTTTTATGCCAAA  52 85
LQRI_RS01750  373976 ..  373993 +  -2.6  -2.84794   TTGCAGCAGGTGTAA             TCCGCC AAGATA GGAGGA              TAATTATGAGATTAA  42 13
LQRI_RS01755 NONE
LQRI_RS01760 NONE
LQRI_RS01765  376321 ..  376337 +  -3.7  -4.27686   CAGTGAACTGTCATT              CGGAAAC ATT GTTTTTG              TTTTCGATACTTTTC  58 464
LQRI_RS01770  378572 ..  378589 +  -6.3  -2.62043   ATCTATACGGAGGAT             TCGGATA TAGA TATCCGG              TAAATTGCTTCTGAA  57 263
LQRI_RS01775  379640 ..  379664 +  -6.4  -5.65177   GTGTTTATGATTATT          AGTCACTCTC CGTTA GAGAGTGGCC          TTTTTTTATAAATAT  93 49
LQRI_RS01780  383031 ..  383079 + -16.5  -3.14053   GGAGTGGATATATTT G-TTCAGGCAATATTATGAACC CAATAA GGTTCATAATATTGCTTGAAAC TGTTAAATAATTTGG 100 58
LQRI_RS01785  385566 ..  385587 +  -3.7  -4.06905   GTTTTTGCTCTTCAT           TTCCAACTT GCAG AAGTAGGAG            TTTCCTTGCTTTATT  56 305
LQRI_RS01790  387049 ..  387061 +  -2.7  -2.80522   CTGGAAGGAGATGCT                TTCAT CCT ATGGA                GTTGTTCAGTGAAAT  42 1
LQRI_RS01795  388113 ..  388140 +  -6.4  -5.10968   TACAATATATAAAAA        GTTTGCAATGTT AATT AAAGTTGCAAAC         TTTTTGTCTGTTAAT  82 29
LQRI_RS01800 NONE
LQRI_RS01805 NONE
LQRI_RS01810 NONE
LQRI_RS01815 NONE
LQRI_RS01820  396251 ..  396265 +    -5   -3.9642   GTCCTCCGGAACGCT               GTAATC ATT GGTTAC               TTTCCTTAGCTCTTT  61 273
LQRI_RS01840  399997 ..  400010 +  -2.5  -4.77036   AATTTTACATGACTT               TAATT TTGT AATTA                TTTTTCATCATAAAA  63 235
        pnuC NONE
        nadR  402433 ..  402443 +  -2.6  -3.24232   GCAGGATTGACGGAT                 TTTA AGT TAAA                 TATGTTTGCAGCAGC  44 71
LQRI_RS01860  402852 ..  402868 +  -5.2  -4.13767   TGAAAGGTGTCAGAG              CATATG TCAGC CATATG              TTTTAAGATAACAGA  64 3
LQRI_RS01865  403235 ..  403245 +  -2.4  -3.27653   GTATCGATTGACATG                 CCCG AGA CGGA                 TGTTATAATGAAAAT  44 137
LQRI_RS01870 NONE
LQRI_RS01875  404502 ..  404524 +  -5.4    -4.386   GGGATTTATGGAGTT           CCGGACCGGG TTC CGCCGTTCGG           TTTTATCCGGCATTC  69 63
LQRI_RS01880  405514 ..  405535 +  -3.6  -5.26119   AAGTAATTTTGAAAA           GCCCGTTG TAATTT TATCGGGC            TTTTATTTTTAAACA  72 59
LQRI_RS15595 NONE
LQRI_RS01885 NONE
LQRI_RS01890  408124 ..  408135 +  -4.4  -2.88999   AAAAGAAGCCTTTGA                TTCG GTAT CGAA                 TGTAGTGTATCAGGA  49 379
LQRI_RS01900  410490 ..  410501 +  -4.4  -3.33744   TTGACAGGGTCTTTG                TCAG GTGC CTGA                 GTTTTTAGGAGGAAG  52 6
LQRI_RS01905 NONE
LQRI_RS01910 NONE
LQRI_RS01915 NONE
LQRI_RS01920 NONE
LQRI_RS01925 NONE
LQRI_RS01930 NONE
LQRI_RS01935 NONE
LQRI_RS01940 NONE
        porA NONE
LQRI_RS01950  419471 ..  419487 +  -3.7   -2.9462   AGTGGAAACTGATAC              GCAGT AGATGGA ACTGC              TGATTTGCGTGACTA  45 6
LQRI_RS01955 NONE
LQRI_RS01960 NONE
LQRI_RS01965 NONE
LQRI_RS01970  422725 ..  422737 +  -2.7  -3.41309   AGGAATAATGGGAAA                TAGTT ATT GACTA                TTCGTGTTGATATGT  46 88
        cooS NONE
LQRI_RS01980 NONE
LQRI_RS01985 NONE
LQRI_RS01990  427474 ..  427499 + -11.2  -4.61231   GGATTTTTCAAAAAA         GCACCGGAAGC TTATT GCT-CCGGTGC         TTTTTAAAAATGTAA 100 81
LQRI_RS02000  431109 ..  431124 +  -2.6  -3.55444   ATTAAAACTACATTT              TTGCAA AAGT TTGTAA               TTTAAAAAATACAAC  46 43
LQRI_RS02005  432304 ..  432316 +  -3.4  -4.35604   AATTGGGGTAATAAT                TACC CCTGA GGTA                TTTATTATAAATTAA  61 84
LQRI_RS02010  436813 ..  436845 +  -7.1  -6.11243   GTTGAGTTTTTAAAA      GGCATTATATTGGTT GTA AAACTGTATAATGCC      TTTTTTTTATTGGGT 100 77
LQRI_RS02015  438756 ..  438787 +  -3.1  -5.09762   GCAAAAGAGTAAAAA      GCACTTTACAT GGTACTTTTA AAGTAAAGTGC       TTTTTATATTACAAT  67 80
LQRI_RS02020  440860 ..  440881 + -10.1  -4.79955   CGACTTGTGATTTGG           GCCGGTGTC TTAA GATGCCGGC            TTTTGTTATAAATAT 100 54
LQRI_RS02025  443111 ..  443131 +  -8.9  -4.96468   GTGTTAAAAATGAAA            CGGGTGGCT TTT GGCTGCCCG            TTTTGTTTACATTTA  95 102
LQRI_RS02030 NONE
LQRI_RS02035  446088 ..  446121 + -14.1  -3.78168   CCAATATCAAAAAAA     TCCTTGAAACACTTT GCGT ACAGTGTTTCAAGGA      TTCTTAAATCTTTTT 100 76
LQRI_RS02045  449679 ..  449694 +  -2.6  -2.87132   GAATAAGGAAAGGAG              TG-TAGC ATG GCTAACA              TATCTGAAAGCCCGG  42 35
LQRI_RS02050 NONE
LQRI_RS02055  456005 ..  456034 +  -5.8  -3.48276   AAAGTCTGTATATTA       TAT-TGGAGAGGC TTTAT GCCTCTCCACAGA       TTCTGTCAGGGAGGC  61 79
LQRI_RS02060  456873 ..  456890 +  -4.1  -2.50016   GAAAGGAGAAAAGTA             TCCATGC AGAA GTATGGG              GTATTAGTAGTGGAC  45 1
LQRI_RS02065 NONE
LQRI_RS02070  459414 ..  459428 +  -4.4  -4.56187   AATTATTTTTAATTA               TTAAAT TTA ATTTAA               TTATTTTTAATTATA  68 278
LQRI_RS16370  459625 ..  459644 +  -3.6  -3.66574   ATAAGAGGGCTGGAG            TAAACCGT AGAC AAGGTTTA             TTATGCTCTTTTTTA  52 23
LQRI_RS02075 NONE
LQRI_RS02080  461565 ..  461603 + -10.4  -4.79352   AAATTATGGATATTA   AAAAAGGTTGACTGCC TTTGTTT GGCAGTCAACCTTTAA   TTTTATTATAAGTCC 100 45
LQRI_RS02095  466569 ..  466595 + -13.8  -5.09245   CAATGAGTGGAAAAA         GGAGTCGTGATG TTT TGTCACGACTCC         TTTTTATAATTTTGC 100 46
        raiA  468412 ..  468445 +  -8.9  -5.47159   ATTTTCTAATATAAT     TGAAAATGCCGAGGC ATAT GTCTCGGCATTTAAA      TTTTTATTTATTGGA 100 80
        pcrA  470794 ..  470812 +    -4  -3.61398   GCCAGAAGTTTTAAT             TAATTAGA AGT TTTAATTA             TTATTAAAAAAACAA  53 122
LQRI_RS02110  472628 ..  472673 + -18.5  -4.07885   TGTTTACAGGATTGA TTAATTTAGGCTGTGCCGGGG TTGC TCCCGGTACAGCCTGAATTCA TTTTGGGAAAGAGTA 100 53
LQRI_RS02115  473998 ..  474031 +    -3  -4.08767   GATCTGAGTCGCGCA     GCAAACCCCAGCGG TAGGTT CCGTTAGGTCTTGC      TTTTCCGCCGGTAAA  55 360
        hisZ NONE
        hisG NONE
        hisD NONE
        hisC NONE
        hisB NONE
LQRI_RS02150  482202 ..  482234 + -12.9  -3.18065   TTGCGTAACTTAAAA      CACTCCCCTTTTA CTTGTTT TAGAAGGGGAGTG      TTGGGTGTATATACT 100 33
        hisH NONE
        hisA NONE
        hisF NONE
       hisIE NONE
LQRI_RS02175  486442 ..  486456 +  -4.4  -4.05714   TAACGAAAAGGGTAA               TATAAT AAT ATTATA               TTTGTGATTAGCACT  60 139
       groES NONE
        groL  488542 ..  488569 +   -15  -5.08878   ATGTGGATAAACAAA        GAGAGATCCTTG TTGT CAAGGGTCTCTC         TTTTATTTATGTGTT 100 58
LQRI_RS02190 NONE
LQRI_RS02195  490402 ..  490421 +  -3.5  -5.99154   TATTGGCGAAAAACA            GGAGGTC AAGGAG GGCTTCC             TTTTTTTATTTAGTG  88 48
LQRI_RS02200 NONE
LQRI_RS02205  493501 ..  493511 +  -5.4  -3.67588   GCATAGCCTAAGGCG                 TGGT TAT ACCA                 TTTCGGTGCCGTTTA  59 244
        greA  494159 ..  494197 + -17.2  -4.14724   ATATTATAAATATGT   TAAAATAACAGTTTACAT TAA ATGTAAGCTGTTATTTTA   TTTAATATTTTATTT 100 94
LQRI_RS02215 NONE
LQRI_RS02220 NONE
LQRI_RS02225 NONE
LQRI_RS02230  497008 ..  497041 +  -6.9  -3.79747   TAGAGCCGGAAGAGG     CTATCTAATAAAAGT TTGA ACTTTTTTTAGAGAG      TTTGATCCTGGCTCA  69 513
LQRI_RS02235  498552 ..  498566 +  -8.6  -2.83715   GTGCGGCTGGATCAC               CTCCTT TCT AAGGAG               TATAATGATACTACG  71 19
LQRI_RS02240  498760 ..  498773 +  -6.7  -3.89614   TTTGCAAATCAGAAA               GCAAG GTTT CTTGC                TTTCTGAAGATTGCA  69 42
LQRI_RS02245  501898 ..  501908 +  -3.2  -3.73008   ATAGAAGGAAAGTCT                 TGCT TTA GGCA                 TTATATATCTTTGAA  50 71
         rrf  502066 ..  502096 + -16.3  -4.53303   TGCCAGATTTAATAT       CAAAGCCTTACGG TTGTT CCGTAGGGCTTTG       TTTTATGTGCAAGTA 100 33
LQRI_RS16005  502423 ..  502456 +  -8.2  -3.86202   ATTTGGATATGTTCA     GCCCAGGTAAATAT ATATAA ATATATTCCTGGGC      TTTAATATAGTCAAA  77 6
        rpsJ  502899 ..  502912 +  -6.7   -3.4582   CACATGCATGAAAAA               GCTCT TGTG AGAGC                TGTTTCATGAAGTGA  65 73
        rplC NONE
        rplD NONE
        rplW NONE
        rplB  505473 ..  505487 +  -2.8  -4.07687   AGAAAATAATTCAAT               CGCTAT GTG ATAGGG               TTTTCAGCGGCAAAT  53 32
        rpsS  505889 ..  505899 +  -5.4  -3.13403   GAAGAAAAAGAAAAA                 GCTT TGG AAGC                 TATTAATGCCAAACA  54 107
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC  507633 ..  507647 +  -2.8  -2.50479   GTATAGAGGTTTGAT               ATCCTT TGA AAGGAG               GTAGTTTTAGTTGGC  40 27
        rpsQ NONE
        rplN NONE
        rplX NONE
        rplE  509256 ..  509280 +  -2.1  -2.66274   GCCAAAGCTAAAGGA          GGGATTTTTGC GTG GCAAAAAAATC          GTTGATTGTGAAACA  40 30
LQRI_RS02325 NONE
        rpsH NONE
        rplF NONE
        rplR NONE
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY NONE
LQRI_RS02365 NONE
         map NONE
LQRI_RS02375 NONE
        infA NONE
        rpmJ  515727 ..  515762 +  -3.5  -2.87313   ATACAGGGCGCGGCT   GG--ATGGTTGTAAGTG CATT CACTTGCAATCATAACC    TGGTGTGTTTATTTA  45 233
        rpsM NONE
        rpsK NONE
        rpsD NONE
LQRI_RS02405 NONE
LQRI_RS02410  519033 ..  519071 +  -4.6  -4.63486   AGGCTGTACGGCATA   CGGGGATTTGGGTG TTATGGGAATT CACCTTAATCCCTG   TTTTGTTAGGAGAGT  68 51
LQRI_RS02415  520302 ..  520312 +  -3.2  -3.68908   TCAAAGCAGTGGCAT                 TGGT AAC ACCG                 TTTAGATGAATATTT  52 379
LQRI_RS02450 NONE
LQRI_RS02455  529893 ..  529928 +  -9.8  -2.90345   GGGAAAGGAAGGAAA    TGAGAGTGCCGC CTAATCAAAACA GCGGCACTCTCG     CTTTACTCTCGCCTT  75 10
LQRI_RS02460 NONE
LQRI_RS02465  533267 ..  533278 +    -3  -4.19735   AACAGAAAAGTCAAT                TCAT TAAT ATGA                 TTTAATTTTCGGAAA  57 136
LQRI_RS02470 NONE
LQRI_RS02475  535163 ..  535177 +  -4.4  -3.01712   AAAATGTATGTATAA               TATATA TGT TATATA               TGTTGAACAAAAAAG  50 26
LQRI_RS02480  536204 ..  536229 + -11.2  -3.37556   AAAAGACTGCCAAGG         GGGCAAAGGC GATGAG GCTTTTGCCC          TTGAATTATTTTAAC  87 43
        truA  537127 ..  537139 +  -4.1  -4.61873   GTATACACCCTCCAT                TACGT CTT GCGTA                TTTTACTTTGTGGCA  65 148
LQRI_RS02490  537910 ..  537932 +  -6.4  -5.24129   TCTTCTAACTCTTGA           TAAAGCTG CATGGCA CAGCTTTA           TTTTTTATGGAAAAA  84 62
        ispD NONE
LQRI_RS02500 NONE
LQRI_RS02505  541047 ..  541068 +    -3  -4.56597   GGAGTTTATAATTCT           GCATAGGG GGATTA TTCTATGC            TTTTTGGACGCAAAA  62 276
LQRI_RS02510 NONE
LQRI_RS02515  545237 ..  545247 +  -2.6  -4.54297   TTGTTTTTATATTTT                 TTAT ATT ATAA                 TTATTTTATTCTTAA  58 512
LQRI_RS15830  545719 ..  545741 +  -6.3  -5.21709   CGCGGAAAACAACAC           TCCGTCC CATAGCAGT GGACGGA           TTTTTTAATGTAAAC  84 105
LQRI_RS02525  547608 ..  547636 + -13.3  -6.02914   CAGGGCTTAAGCAAG        GAGTATCGCATGT TTG ACATGTGGTACTC        TTTTTTTTATATAAA 100 73
LQRI_RS02530  548644 ..  548668 + -10.1  -5.86976   AAGAAAAATTTAGAA          TCTGCAGGA AAAAAAC TCCTGCAGA          TTTTTTATTTTATAC 100 44
LQRI_RS16010 NONE
LQRI_RS02545  553476 ..  553492 +  -2.9   -4.3767   GAAAATTCTATGTTG              GTGTTGA TAA TCACCGC              TTTATTCTCATATCG  60 114
LQRI_RS02565 NONE
LQRI_RS02570  556374 ..  556398 +  -6.5   -5.6473   AAATATCGTTATACA          GGTCATATAGT TCA GTTGTATGACC          TTTTTTTGCTATTCT  93 39
LQRI_RS02575 NONE
LQRI_RS02585  558624 ..  558635 +  -2.2  -3.79445   AGCATTATAAAAAGA                CAGT AACA GCTG                 TTTGCATTGATGATT  50 268
LQRI_RS02605  561572 ..  561613 + -12.3  -3.14279   TACAGTTAATAAGAA ATGGACGGTTCTTAGCCTG ACAT CAGACAAAGAACCGTCCGC  ATTGTTTTAACTATT  90 479
LQRI_RS02635  568879 ..  568901 +  -9.9  -4.11884   TGATATAAGAGAGAA           CAGGGCAGT AATAA ACTGTCCTG           TTTATAATTCTAATT  90 186
LQRI_RS02640  570296 ..  570331 +  -4.9  -5.26875   TTAGAAAAAATGAAA    GGAGCCAAAT-AACTT TAGAC AGGTTGATTTAGCTCC    TTTTTTAATTAAGAC  79 106
LQRI_RS02650 NONE
LQRI_RS02655 NONE
LQRI_RS02660  573400 ..  573420 +  -6.2  -4.37157   AATAAAGCAAAAAAA           GGGGGAGTA ATTT TA-TCCCCC            TTTGTTGTACTGATT  74 47
        sfsA  578316 ..  578341 + -10.3  -4.09685   TCCGGCTCGGGCTTT         TCCGGTCCGGG TTTT CCCGGTTCGGG          TTTTGCCGGGTCAGG  86 369
LQRI_RS02690  580260 ..  580283 +    -4  -3.32844   AAGGCGTAAATATAA          GCTATATA AACACAAG TATATAGC           TTATAAAATAAAAAA  49 32
LQRI_RS02695  581742 ..  581776 + -10.2  -5.61913   GAATGAATAAGGAAA     TTCCTTCTTGGTGT GAATCGA ACACTAAGGAGGAA     TTTTTTATGTTTATT 100 66
LQRI_RS02700  582619 ..  582660 + -16.1  -5.52384   CTTGGTTACATACAC CACCTTGGCTTTCTGATAA TCTT TTGTCAGAAGACCAAGGTG  TTTTTTTAATGGAGG 100 46
LQRI_RS02705 NONE
LQRI_RS02710  583991 ..  584004 +  -3.8  -3.48824   AAAATCACGGTTAAT               GCCA AAAGCA TGGC                TGTTCTTGTCAAATA  52 511
LQRI_RS02720  585291 ..  585302 +  -4.4  -4.48299   TTAGAATCTGTCAAA                CAAC TGAT GTTG                 TTTATTTGCGTATAC  65 58
LQRI_RS02725  587066 ..  587105 + -10.9  -3.58269   TGTTTTTGAAGGCAG  TCCCTTCGCAGGAAA TAAGTTAAAC TTTCTTGCGGAGGGA   TTTGCACATAGGTTG  89 54
LQRI_RS15840 NONE
LQRI_RS02765  594213 ..  594239 + -11.7  -5.52384   GGTTGTTAAAGAAAA         CCTTGACCATA TGCGC TGTGGTCAAGG         TTTTTTTCATAAAAA 100 74
        msrA  595291 ..  595332 +  -3.1  -3.66378   TGTATTATTTTGAGT TTTTGCCGCAAACTATAGT TGTC AATATAGTTTGAGGAGGAA  TTTAAATGGCGTATG  50 91
LQRI_RS02780  597700 ..  597716 +  -2.3  -4.58395   GATCCCGACGGTAAA              GTATATA ATT TACATAC              TTTTTACAAAATAAA  59 450
LQRI_RS02785  598588 ..  598600 +  -4.9     -3.67   GAAAGTGGAGGGAAT                TCATT ATG AATGA                TATTTTACGGCTTAG  58 91
LQRI_RS02790  599696 ..  599733 +  -4.9  -5.08178   TTTAAACAAATTATT   GAGGCGATAATCCGCTGA AGC TAAGGGGATTAA-GCCTC   TTTTTCTATGTCTGT  75 82
LQRI_RS02795 NONE
LQRI_RS02800  602462 ..  602502 + -12.8  -5.62219   GGATACTGTGACGGA  TGAGGAGCTAAAGAGCTT TCATT AGGCTCTTTAGCTCTTTG  TTTTTTTGATGTATT 100 1
LQRI_RS02805  603421 ..  603457 +  -8.3  -6.11392   AAAAGACGTTAAAAA   TATGGAAGAAGC-TTG AACTGG CAATGTTTCTTCCATA    TTTTTTTATTTGTTT 100 39
LQRI_RS02810  604691 ..  604709 +  -3.2  -2.59742   AGATTTAAAACACCA             ATTGATAT AAT ATATCAAA             CTTATGAGGATTACC  42 222
LQRI_RS02815  606566 ..  606601 +  -4.1   -4.9725   AGCGGCCTTGTTTAA    TGAACTGTACGTA TTTACAATGT TTCGTGCAGTTCA     TTTTTATCTAAAGCT  70 74
LQRI_RS02825 NONE
LQRI_RS02830  609243 ..  609255 +  -4.1  -3.84266   CCAGAGTACGTGAAA                GTTTC AGG GAAGC                TTTGCTCTAAAATGT  56 122
LQRI_RS02835  609986 ..  610005 + -10.7  -4.90471   TATAATAAAAAATGA            GGACCGG TTTTAT CCGGTCC             TTTTCTATTTTGCAT 100 79
LQRI_RS02845  615118 ..  615145 +  -4.9  -5.72207   AAATCCAAATTTTTA        TGCAGGTTATA TTTAAT TATAGCCTGCC         TTTTTTTAATTTCAG  90 77
LQRI_RS02870  619155 ..  619165 +  -5.4  -3.17688   TAGTGTAAAGAGAAT                 TGGA AAA TCCA                 TTGCTAAAATAGTTG  54 351
LQRI_RS02875  619758 ..  619786 +  -2.4  -5.32599   AGAAAAATAAGTACG       AGGCTGC-TCAGT TTCG GCTGATGTAGCCC        TTTTTCTGTTTTATA  72 108
LQRI_RS02880  622080 ..  622110 +   -17   -5.1615   CTCCCAAGTAAAAAA       CCTCCGTCAGGA ACTTAAG TCCTGACGGAGG       TTTTTTACGTCTTAC 100 63
LQRI_RS02945  636060 ..  636077 + -11.3  -5.11613   AAACGTATAAAAAAA             GCCGCTA AAAT TAGCGGC              TTTTTTAAATGATGT 100 51
LQRI_RS02955  638465 ..  638475 +  -2.4  -2.60194   GAATAAGAATCCAGG                 GAGG GAT CCAC                 ATTGATTAGCAAAAT  40 145
LQRI_RS02960  641102 ..  641142 + -17.5  -3.02263   CCGCCTTTCGGATCT  CCTGCCGGAGTTCCCGGTG TAT TGCCGGGGACGACGGCAGG  TGTTCCACCGGGTCT 100 152
LQRI_RS16020  641450 ..  641477 +   -10  -4.83593   CAGGTATTCCAAAAA        TTGCAAGGAG ATAAAAGC CTCCTTGCAA         TTTTTAATGCTTATT 100 80
LQRI_RS02970  642127 ..  642168 + -14.1  -4.33675   AATTTTGATTTTTGC GGCATTTCATTTTTATG TGGAAAGT CATGAAAATGAAATGCC  TTTTAATAATATCCT 100 111
LQRI_RS02975  642726 ..  642770 +  -4.3  -2.74144   TACTTTGCTTTTTTC CGGTAGTTTTGTCGTTTCTAA TGG TCACAAACGGAAAAGCAACCG CTTTCAAACTCGGGG  48 116
LQRI_RS16205  643108 ..  643132 +  -8.6  -5.57729   TTGCAAAATTAAAAA          CTCAGGGGTT GGCAA AGTCCCTGAG          TTTTTTGTCTTATTT 100 46
LQRI_RS02990  646656 ..  646666 +  -2.6  -3.69449   AAATAGAAAATTTTT                 TATA ATC TATA                 TATTTTGCAATATTC  48 35
LQRI_RS02995  647397 ..  647433 + -14.7   -2.5366   GTGTAATAATTGCAA    ATAAAAGCTCATGGGTT GGA AACTCATGAGCTTTTAA    AATTTGATTTTTTGC 100 51
LQRI_RS03000  648340 ..  648365 + -11.9  -4.28049   ACTGAGAACAAGAAA         GCGGCATCACT TAAC GGTGATGTCGC          TTTTAACCTTTTAAA 100 75
LQRI_RS03005 NONE
LQRI_RS03010 NONE
        menA  652606 ..  652636 +  -5.6  -3.52539   TTACTTTAACTTGTA       GTTAAACTTGAACT TAT AGTTGAACTTTAAC       TTGTAATTAAACTTG  58 86
LQRI_RS03020  653720 ..  653730 +  -5.4  -4.46581   ATCATGAACATGTCA                 TCAG ACG CTGA                 TTTTGTCCGGTTTTA  69 15
LQRI_RS03025 NONE
LQRI_RS03030  655535 ..  655568 +    -9  -4.96762   TCCTTAAACAAAAAA     GTTAAACGGGCT TAATAGCCGC GGCCCGTTTAAC      TTTTTGTAATATATG  95 69
LQRI_RS03035 NONE
LQRI_RS03040 NONE
LQRI_RS03045  658806 ..  658817 +    -3  -3.69605   ATTGCTGTAAAAATA                GAAT AATT ATTC                 TTGATTTTACCTCGA  50 40
        radC  660054 ..  660088 +  -5.7  -3.53761   AATATTCTTCCCGCC     GGCTGATACCAAGCT TCGGC AACCTGATATCAGCC     TTTGGCCGACCATTA  61 520
LQRI_RS03060 NONE
LQRI_RS03065  665802 ..  665841 + -10.8  -2.98387   CGTATATAGTATAAT  CA-AGGGGTTCAGGGAAAC TCT GGTTTCCTGAACCCCCCTG  TAATATTTTATACGC  83 32
LQRI_RS03070 NONE
LQRI_RS03075  675654 ..  675680 +  -5.2  -5.27206   ATTTAATTGGTGAAA        GGTCACA-CAG TTTCGT CTGATGTGGCC         TTTTTCTTATCTATG  80 35
LQRI_RS03080 NONE
LQRI_RS16025  676329 ..  676371 + -15.8  -4.27117   CGAATGACTCACCTA TAGAGCCTGGCGGATAGTCT TAA AAACTATTTGTCAGGCTCTA TTTATGTTCTCGGAG 100 77
LQRI_RS03085  676619 ..  676634 +  -3.3  -2.61274   AAATGTCAATAAAAA              TTTGG TTCTTT CCAAA               GTTAGTTGAAATAAA  44 1
LQRI_RS03090 NONE
LQRI_RS03095  678154 ..  678170 +  -3.7  -2.89655   GAAACAATTTGAAAT              GATATGC AAA GAATATC              CGTTTTTTTGAAAAG  45 44
LQRI_RS16210  678920 ..  678933 +  -5.3  -4.91109   GAGTCCCAATTTTTT               GGTAT CATG ATACC                TTTTTATCCTGCGGC  74 460
LQRI_RS03110  680476 ..  680501 +    -2   -3.0247   AGAATTTTTTTGCTG         TTGATAGTTA TTTTTC TAATTATCGA          ATTTATCTCAAAATT  42 326
LQRI_RS03120  681280 ..  681294 +  -4.4  -3.87373   TTCCACAAAATAGTC               TATAAA ATA TTTATA               TTTATAAAAAATATA  58 191
LQRI_RS03125 NONE
LQRI_RS03130  683802 ..  683824 +  -2.8  -4.18018   TCAAGCTGAGGATAC           TTATGGAT GAGCTGA ATCCGTAA           TTTTCAATCCGGCGA  55 3
LQRI_RS03135  685900 ..  685914 +  -8.6  -2.83715   GTGCGGCTGGATCAC               CTCCTT TCT AAGGAG               TATAATGATACTACG  71 19
LQRI_RS03140  689141 ..  689151 +  -3.2  -3.73008   ATAGAAGGAAAGTCT                 TGCT TTA GGCA                 TTATATATCTTTGAA  50 71
         rrf  689309 ..  689339 + -16.3  -4.86731   TGCCAGATTTAATAT       CAAAGCCTTACGG TTGTT CCGTAGGGCTTTG       TTTTATTTCAAGGAA 100 33
LQRI_RS03150  691234 ..  691248 +  -4.4  -3.63298   ATTGCAAAAAAAGTT               TATAAA TTG TTTATA               TATTATTTAGTTGAA  56 145
LQRI_RS03155  692616 ..  692650 + -15.1  -2.74293   TTTTAAGGATTTATT     TGAAACTGGCAGCGG CTTTT CCGCTGTCGGTTTCG     TAAATTATTGTTTAT 100 63
LQRI_RS03160 NONE
LQRI_RS03165 NONE
LQRI_RS03170 NONE
LQRI_RS03175  696379 ..  696389 +  -2.6  -2.96452   TTTTATGAATTGTAT                 TTAT TGT ATAA                 TGTACTTGTAAAGCT  42 81
        yyaC  697260 ..  697272 +  -4.9  -3.40258   TTCATTTCTGATATT                TATGA TTT TCATA                TTAATTGGATGTATT  56 223
LQRI_RS03185  697908 ..  697936 + -13.3  -4.68506   TACCTAACTATACAA        GGGTTGAGTAC GAAAACG GTACTCAACCC        TTTTTGGCATTGATT 100 398
LQRI_RS03195  699582 ..  699593 +    -3  -3.05046   TGAATTTCTTTGCAG                TCAA GAAA TTGA                 GTTTTGAAAGGATAG  45 7
LQRI_RS03200 NONE
LQRI_RS03205  702161 ..  702186 +  -5.4  -5.14563   AATCAATATGAAAAA         CTGCCTCGAG AGCCAA TTAGAGGCAG          TTTTTTCATGGACAA  80 68
LQRI_RS03210  703669 ..  703681 +  -3.5  -3.01712   CTCAAATTCCGTTTA                TATAT CGA ATATA                TATTACAAGAAAGAA  46 90
LQRI_RS03215  709585 ..  709638 +  -7.5  -5.88197   ACGACGCACAGTAAA TATTAAAATTGGGAGGAAGGATACC CCCC GGTATCCTTCCTCTCAAAAATATTC TTTTTTTATATTTGA 100 27
LQRI_RS03220  716601 ..  716631 +    -9  -5.56264   AATGATATGTCAAAA       GCTGTTGCGTTTAG TTC TTTGACGCAGCAGC       TTTTTTATATTTGAA 100 61
LQRI_RS03225  719330 ..  719340 +  -2.6  -4.08767   GTGTTCATATCATAT                 TAAT TAA ATTA                 TTTTGGGAGGATAAG  53 51
LQRI_RS03230  721190 ..  721212 +    -5  -5.37865   TTTGGCGTCTTTGGT           TAATTCCTTT GCC AAAGCAATTA           TTTTTTCATTATTGC  87 521
LQRI_RS03240  722493 ..  722505 +  -2.7  -2.66291   GGCGGAATAAATCTT                TCTTT ATC GAAGA                TACTATAAATATATA  40 65
LQRI_RS03245  723198 ..  723214 +  -3.6  -5.08255   CAATACAATCATCGA              CTCCTG CGAGA CAGGCG              TTTTCTTTTGCCAGT  72 330
        aroA  726582 ..  726595 +  -2.5  -3.47078   AATATAGTATTATTT               TATAA AGTT TTATA                TTATAATGTAAAATA  46 51
       spo0A  727528 ..  727559 + -13.2  -2.74256   AATTGCCTGATTAAT      CTAAAAGACCTGTC GTAC GACAGGTCTTTTAA       TGATATAATTTAATT 100 40
LQRI_RS03280 NONE
LQRI_RS03285  730275 ..  730285 +  -2.6   -4.6856   TAGTGTATAATAAAA                 TTTA GGT TAAA                 TTTTTACGATGTTTA  60 108
LQRI_RS03290  730611 ..  730629 +    -9  -5.68039   AATCCGGCAAAAAAA             TAAGACAT TTA ATGTCTTA             TTTTTTTGTGCCTTT 100 102
LQRI_RS03295  732311 ..  732330 +  -8.6  -4.18018   TGCAGGCACTCAAAA            CTGCTCAG GTTC TTGAGCAG             TTTTGGGTAGCCGGG  87 60
LQRI_RS03300  732570 ..  732624 + -15.3  -3.01712   GCGGATGGCTCACCA GGTAATAAAAGGAAGCTTATGACGC AGAAG GTGTCATAAGATTCCTTTTAAAACC TCTTAAAAGGCGGAA 100 26
LQRI_RS03305  732824 ..  732843 +    -2   -3.5511   TATCAGCCTGTATTT            GGTGCTGG TCTG CCAGAAGC             TGTTTATCGCTGGCA  46 42
LQRI_RS03310  732980 ..  732990 +  -2.6  -3.46178   GGTCGCCACTATAGA                 TTTA AAT TAAA                 TTATAATAAATTTCT  46 33
LQRI_RS03315 NONE
LQRI_RS03320  733186 ..  733218 + -15.1  -5.27335   CATCTCCCTCCACCA      GACAAAAGCGAGTAT AAA ATACTCGCTTTTGTG      TTTTTGTTTAAAGAA 100 26
        tnpA  733929 ..  733947 +   -16  -3.53767   TAGGGCTAGAGCAAA             CCACCGGC TGA GCCGGTGG             TTATGATTAACTGTT 100 126
        dapF NONE
LQRI_RS03365 NONE
LQRI_RS03370  744892 ..  744908 +  -4.4  -5.33785   AGTGAATTTTAAAAA              TCAGCT GAAAA GGCTGA              TTTTTTGTAGTCATT  81 50
LQRI_RS03375 NONE
LQRI_RS03380  746996 ..  747011 +    -4  -3.38725   GCTGTATTGGACAAA              CTGAGT TTGA ACTTAG               ATTTTGTTGGAACTT  51 184
        queC NONE
        queD NONE
LQRI_RS03395 NONE
LQRI_RS03400 NONE
LQRI_RS03405  750248 ..  750267 +  -4.4  -3.80855   AAAATAAATTCTGGG            GTAATGAT TAGG ATTATTAC             TTGCTTTTTAGCAAA  58 271
LQRI_RS03410  752112 ..  752126 +  -8.6  -2.83715   GTGCGGCTGGATCAC               CTCCTT TCT AAGGAG               TATAATGATACTACG  71 19
LQRI_RS03415  752312 ..  752325 +  -8.1  -3.01791   CACCAGTTCGGGATA               CAGGC GATA GCCTG                TGTTCCGAAAAAGAT  70 36
LQRI_RS03420  755453 ..  755463 +  -5.4  -3.73008   ATAGAAGGAAAGTCT                 TGCT TTA AGCA                 TTATATATCTTTGAA  59 70
         rrf NONE
LQRI_RS03430  755706 ..  755744 + -13.5  -4.86731   GGAGCCATATACATA   CAAAATAGCTTAAACCT AGGGA AGGTTTAAGCTATTTTA   TTTTATTTGAAAAAG 100 34
LQRI_RS03435  756852 ..  756870 +  -6.7  -6.01369   GGTTAAATAAAAAAA             TTCCGGT ATTTA GCCGGAA             TTTTTTTATTGTTTA 100 53
        tnpA  757581 ..  757610 + -11.5  -3.97947   CCTTATAGGGCTAGA       GCA-AACCACCGGC TGA GCCGGTGGTTATGA       TTTCTGATGAATACA 100 121
LQRI_RS03445  758362 ..  758400 +  -7.6  -3.12338   AAAATGTTCATTAGA   ATATTATTAGCACTCATT TAC AGTGAGTGCTAATAAAGC   GTTTTAAAATTCCTT  67 140
LQRI_RS03450 NONE
LQRI_RS03455 NONE
LQRI_RS03460  761986 ..  761996 +  -3.2  -2.80291   CTTGAAGAAACAAAG                 CTCT CGG GGAG                 TATGATAGGATGATT  43 2
LQRI_RS03465  763098 ..  763146 +  -2.5  -3.53722   AGGTCATTTTAGAGA CAAGATAGGCTTCTTTGATTAGT CAC AGTAATCGGAGGTGTTTATCATG TTGTATCCGTATAAA  46 104
LQRI_RS03470  764238 ..  764255 +  -2.1  -6.67286   AGTTGTAATATGAAA             TTTTTTG CATA TAAAAAA              TTTTTTTTTTGTTTA  91 28
LQRI_RS03475  765169 ..  765181 +  -3.5  -5.51402   TGTAATTAAATTCGA                TATAT TTA ATATA                TTTTTTTGGATATAT  76 83
LQRI_RS03480 NONE
LQRI_RS03485 NONE
        nifJ  770021 ..  770054 + -16.1  -4.91459   AGGTAGCATGCAAAA     GGGCTGCTGCACTAA GAAA TTGGTGCAACAGCCC      TTTTTGTCAGTCTTG 100 42
LQRI_RS03505 NONE
LQRI_RS03510  776615 ..  776666 +  -4.9  -5.28983   AAACTATTGTGGAAC TA-AAATAAGAGAGCACT-TAAC TAAAAACT GTGATAGTGCTCTCTTATTTGTA TTTTTATATTTTCCG  79 40
LQRI_RS03515  778542 ..  778576 + -13.7  -4.07133   TTCATTATTCATTCG     GAATGGCTTTGGCCG ATTTG TGGGCAAAGCCATTC     TTGTTTCTGAAAATG 100 90
LQRI_RS03520  779314 ..  779334 +  -6.1  -5.46698   TAATGAAATGATACG            GCTCCCT TATGCAC GGGGAGC            TTTTTTGATTTTAAA  88 64
LQRI_RS03525  780441 ..  780453 +  -3.5  -4.07306   AAGATAGCTGTCAAT                TTTTT TTC AAAAA                TTTGTCATTGACTAT  56 61
LQRI_RS03530  781964 ..  781996 +  -4.2  -4.96646   TCAAATTGTTTGTAT     GCAGG-ATAAAGCCA CATT TAGCTTTAGACCTGC      TTTTTCATTATCTGG  70 68
LQRI_RS03535 NONE
LQRI_RS03540  785055 ..  785067 +  -3.5  -4.87803   ATTTGTTTTAATTGT                TTAAT TGT ATTAA                TTTTATTTAGGAGTG  66 158
LQRI_RS03545  785959 ..  785972 +  -2.5  -4.07568   TTTTTTAAAATAGTT               TATTT TTTT AAATA                TTTTAAAAGAAAGGG  53 157
LQRI_RS03550  787727 ..  787759 + -14.4  -6.07374   TGTTCTTGTGAAAAA     TTTGGCATAG-CCGT TGAG ACGGGCTATGCCAAA      TTTTTTATTTTTTCT 100 52
LQRI_RS03555  789278 ..  789292 +  -2.9  -2.74182   GCTCACAATAAATCC               TCTTA ATGAA TAAGA               TAATCTGTAATTATT  42 63
LQRI_RS03560 NONE
LQRI_RS03565  790401 ..  790439 +  -8.9  -4.89339   ATTGAAAGACGAAAA   TCTCCTTCCTGGCAA GAATCATAA TAGCCGGGGAGGAGA   TTTTTATGGATAGTT  93 52
LQRI_RS03570  791119 ..  791165 + -11.2  -3.00785   AAGTACATAAAAAAA TTGTCAATTTATTCGAAGTC ATAAATA GAATCCGAATAAATTGACAA TAATTATGTTATTTG  84 264
LQRI_RS03595 NONE
LQRI_RS03600  798655 ..  798694 + -14.3  -2.67803   TGAAATATAAAAAAT  GCCCGCCCTGG-TACGGT TTAAT GCCGAAACCAGGGTGGGC  TGAATTTACTGGAAC 100 42
LQRI_RS03615 NONE
LQRI_RS03620  802838 ..  802880 +  -4.3   -5.2189   ATTAATTTACGACTT TATACCCTTGACGTG-TGTT TTTT GACAACATATCAAGGGTTTA TTTTTTGCTAATTAC  77 95
LQRI_RS03625 NONE
LQRI_RS03630  806849 ..  806871 +  -6.4  -2.58362   GATATTTATTCATAG           TCATCATATA TGA TATATGCTGA           AGTTTTGATGTTTTA  56 86
LQRI_RS03635  808531 ..  808545 +  -2.8   -2.7365   ATTAAATTATTGATT               AAACCA AGG TGGTTA               TCCGTTGTATTTTTT  40 146
        cbiB  809832 ..  809856 +  -9.2  -5.06103   AATGTAAAGGCTGAA          GCACCTTGGG TATTT CCCGTGGTGC          TTTTTTAAAAGTTGT  95 80
        cobU NONE
        cobS NONE
        cobC  811934 ..  811945 +  -4.4  -3.52102   TAAAAGGATTTCCTT                GACA AATT TGTC                 TTATATAAATAAAAT  54 77
LQRI_RS03660 NONE
LQRI_RS03665  813627 ..  813655 + -13.3  -3.18452   TATTATAAATTAAAA        GAAGAGATTGGGT TTT GCTCAATCTCTTC        TCATTTATTTGGAGC 100 203
LQRI_RS03675 NONE
LQRI_RS03680 NONE
LQRI_RS03685  819339 ..  819386 +   -13  -2.52623   GGTTAGAAAACGGGG TCAGGCTTGATGAGTTCACA TTCAAAGT TGTGGATTTGTCAAGCCTGA ATCTTGTAAAAAGGA  95 35
LQRI_RS03690 NONE
LQRI_RS03695 NONE
LQRI_RS03700  823077 ..  823089 +  -3.3  -3.22877   AAATAAATAAAGATT                GGAGC TCT GCTCA                TTGCGTGTTAATTTG  48 195
LQRI_RS03705  823901 ..  823917 + -10.9  -5.09225   ATAATCAATAAAAAG              GAGGCTT GAG AAGCCTC              TTTTTTGCATAAAAT 100 117
LQRI_RS03710 NONE
LQRI_RS03715  827195 ..  827216 +  -6.7  -2.53911   CAATTCTATACGGGG           CTAACATTG ATTT TAATGTTAG            TCCCTTAAAAATTGA  59 48
LQRI_RS03720 NONE
        glgD NONE
LQRI_RS03730  830809 ..  830846 + -15.8     -2.89   GAAGGAAATAATAAG   TAAAAGGCTCAGTGAC CAAAAT GTCTCTGAGCCTTTTA    TGCTTATATACCCAT 100 115
LQRI_RS03740 NONE
LQRI_RS03745 NONE
LQRI_RS03750  836581 ..  836612 + -15.4  -5.52384   TGCTGTTTAAAAAAA      GAAATGCTGTTTGT GAAA GCAAACAGCATTTC       TTTTTTTGGTGGGCG 100 87
LQRI_RS03760  837926 ..  837937 +  -5.8  -3.55622   TTCAAAAAGGATAAG                CCGT TCAA ACGG                 TTTGAAAAAATTGAA  61 42
LQRI_RS03790  844208 ..  844254 + -11.8  -4.21827   AAATTCATATGGCAA TCCTCTTTTCCATGGTAATTTA TTG TATTTTACCATAGGAAAGAGGA TTTTACCGTGTTTAA 100 69
LQRI_RS03795  845385 ..  845416 +  -8.1  -4.23615   GGTATTTAACTTTTA      GGGTAGAATCTTC TTTTAT GAAGTTTTTACCC       TTTATTGCGTCTGAT  83 178
        trkA NONE
LQRI_RS03805 NONE
LQRI_RS03810 NONE
LQRI_RS03815  851821 ..  851837 +  -4.5  -3.43773   AAAGGGATGTGTGCG              TTGAGTT TGC AACTTAA              TATTTGCATATACGG  52 444
LQRI_RS03825  853699 ..  853739 +  -4.8  -4.06281   TTGTAAATGAAAAAG GGAGTCTTGATTGCTTGAT TGAA AACG-GCATTTAAGACTCC  TGTTTTGTTTCGGAT  62 75
LQRI_RS03830 NONE
LQRI_RS03835 NONE
LQRI_RS03840  858564 ..  858577 +  -2.5  -4.15698   CCGCTGTTTGCAATT               TATTT GCAT AAATA                TTATTTGTATAAATA  57 513
LQRI_RS03850  859998 ..  860013 +  -3.3  -5.26119   ACGGTTTAAACTTTG              CAACT AAAAGG AGTTG               TTTTATTTTTGGGAG  72 240
LQRI_RS03860  861353 ..  861379 +    -8   -5.2696   GAGAATGAAAGAAAA         CCAGGAGTTG GTGTGCA CGGCTCCTGG         TTTTTTGCATTTTCC  93 39
LQRI_RS03870 NONE
LQRI_RS03875  863851 ..  863868 +  -9.9  -3.67296   AAATCCTCTGAAAAA             GACTGGA TGAA TCCAGTC              TTTAACTACATAATG  86 96
LQRI_RS03880  864995 ..  865007 +  -3.3  -3.31905   AAGTGATACTAAAGA                GGCTC ATT GAGGC                TATTGTGTAGGAGAT  48 3
        alaS  867979 ..  868011 + -12.9  -3.55505   AAATGCTTGTAAACC      TTGAAAATAGCAGGA TTT TCCTGCTATTTTCTG      TCTTATTATGCTTTT 100 74
LQRI_RS03890  869540 ..  869564 +  -7.3  -5.60864   AGTATAGTGCATGAA          TGAATTCAAAC GAA GTTTGAGTTTA          TTTTTTTAGTGTATA 100 27
LQRI_RS03895 NONE
LQRI_RS03900 NONE
LQRI_RS03905 NONE
LQRI_RS03910 NONE
LQRI_RS03915 NONE
LQRI_RS03920 NONE
LQRI_RS03925 NONE
LQRI_RS03930 NONE
LQRI_RS03935 NONE
LQRI_RS03940 NONE
LQRI_RS03945  880480 ..  880492 +  -3.5  -2.87564   ATTACAAGATCCTGA                TAAAT AAC ATTTA                TCTATAAAAAGATGA  45 26
LQRI_RS03950  882102 ..  882114 +  -2.7  -2.54098   ATACAAAATTATTGA                GAATT TTG AGTTC                ATGTTCGTTAAAGCC  40 138
        cas1 NONE
LQRI_RS16355 NONE
        cas2 NONE
        cas4 NONE
LQRI_RS03970  885756 ..  885795 + -10.8  -2.98387   CGTATATAGTATAAT  CA-AGGGGTTCAGGGAAAC TCT GGTTTCCTGAACCCCCCTG  TAATATTTTATACGC  83 32
LQRI_RS03980 NONE
LQRI_RS03985 NONE
LQRI_RS03990  889536 ..  889579 +  -4.6  -5.65678   GTAGATGATACAACG GACTGACAAGTATTTCTCTT ATAA AAGGGATTTAGTTGGCAGTC TTTTTTATATTTTAT  83 176
LQRI_RS03995  890979 ..  890993 + -11.4     -2.89   GGTGAGGACGGGGTT               TGGGGC GGA GCCCCA               TAATTCTATACAACT  86 249
LQRI_RS04010 NONE
LQRI_RS04015  894491 ..  894511 +  -2.7   -2.8733   AAGGCAAGAAGAAAA            TAAAATTTT TTC AATATTTTA            ATGTTTTATAAGACA  42 49
LQRI_RS04020 NONE
LQRI_RS04025 NONE
LQRI_RS04030  899304 ..  899352 +  -6.8  -6.07374   CGCAGAACGTAAAAA GAGGCTGGCAGGCATTTTTC AAACAAAAG GAAATTTGCTTGTCAGTCTC TTTTTTATTTTTTAT 100 59
LQRI_RS04035 NONE
LQRI_RS04040 NONE
LQRI_RS04045  906939 ..  906951 +  -3.5  -2.96157   ATAAATATGTATTAC                TTATA ATA TATAA                TAACTTTTTTATGCA  45 42
LQRI_RS04050  908462 ..  908505 +  -8.9   -5.5762   TAAATTGATACAACG GGCTGGCAAGCATTTTCCT GAATAG AGGAATTTGCTTGGCAGTC TTTTTTATATTTCAT 100 173
LQRI_RS04055 NONE
LQRI_RS04060 NONE
LQRI_RS04065 NONE
LQRI_RS04070  914906 ..  914938 + -15.8  -3.49182   ATAAAATATTACAGG     GGGGTTCA-GGAAAC CAGA GTTTCCCTGAACCCC      TTGATTATACTATAT 100 169
LQRI_RS04085  919794 ..  919810 +  -5.1  -3.80279   TATATGTTTTTTATA              TCAGCCA ACC TGTCTGA              TTATATATTTATGAA  60 73
LQRI_RS04090  920781 ..  920815 + -10.1  -3.68738   ATACATAAAAAAAGA    GCGGAT-GGCGGAAGG CAGG TCTTTCGTCTATCCGC     TTGTATATTGAGGTA  86 51
LQRI_RS04095 NONE
LQRI_RS04100  922345 ..  922369 + -10.8  -4.86862   TAAGTATGGATTATT          GACGTGAAGG AAATA CTTTCACGTC          TTTTAATTTTTTAAC 100 69
LQRI_RS04105  923229 ..  923245 +  -5.9  -3.71917   TTGAGATTTTTTAGT              GCAAGTA TGG TATTTGC              TTTGAAATTTGCGCT  62 100
LQRI_RS04110  923801 ..  923812 +  -3.6  -3.39595   TGACGGGACTTATCT                GGGC AGCG GTCC                 TTATGCGTCCTTCAA  50 117
LQRI_RS04125  926942 ..  926961 +  -6.4  -3.37761   GACTAAATTTATAAT            GAAACCTG TTAT CTGGTTTC             TTAATGTGTTGACCT  62 157
LQRI_RS04130  927952 ..  927983 +  -9.6  -4.98103   TTTAAAGCTTTATGG      GCGGACATGTTA CAGAAAGA TAATATGTCCGC       TTTTGTATTTTATTG 100 178
LQRI_RS04135 NONE
LQRI_RS04140  930214 ..  930226 +  -2.7  -3.20841   ATGCTTTAATGTTTT                TACAG TCC TTGTA                TATTGGTATAAATAT  44 270
LQRI_RS04145  931329 ..  931342 +  -2.3   -3.5087   CTCTCACAATAATAC               CGTCA ATAG TGCCG                TCGTTTTTTATTCCG  47 504
LQRI_RS04155  934668 ..  934680 +  -4.1  -3.75332   ATGTTGTCAGTAAAT                GCGTT ATT AATGC                TTTACCTTAAACAGT  53 82
LQRI_RS04160  935326 ..  935360 +  -4.3  -5.27476   TATCTTTGGAAATTA     ACCGGAATAAACC GAAAATCAA GGGTTATTCCGGC     TTTTGTTTTATTCCG  77 54
LQRI_RS04165  936615 ..  936643 +  -7.3  -5.66926   ATAGTAATACAATAA        CCGGCCTGTGGGA TTG TTCCGCGGGTCTG        TTTTATTTTTTTTGA 100 37
LQRI_RS04170 NONE
LQRI_RS04175 NONE
LQRI_RS04180  938462 ..  938472 +  -3.2  -3.01712   GGACAGTGAGGGAGA                 TGTC ACC GGCA                 TGTTCCACACCCGAC  45 43
LQRI_RS04185  938965 ..  938977 +  -3.5  -5.69023   CCGAAGGGGGATTTA                TTTTT TTT AAAAA                TTTTTTTAATATTTT  79 78
LQRI_RS04190 NONE
LQRI_RS04195  940566 ..  940591 + -11.2    -5.186   AATATAATTAAGAAA         TGGGTTGCCG CTAATT CGGCAACTCA          TTTTTATATATTTTG 100 64
LQRI_RS04205 NONE
LQRI_RS04210  942678 ..  942693 +  -6.2  -4.68779   CCGTATTTTACAATA              TCCATA CGAA TATGGA               TTATTTTATTTTGTT  76 52
LQRI_RS04215  943653 ..  943671 + -14.6  -3.28791   ATTGTTTAAAGAAAA             CCACTGGC TAT GCCAGTGG             TTCTAAAGAGACAGT 100 99
        tnpA  944341 ..  944370 + -11.5  -4.28747   CCTTATAGGGCTAGA       GCA-AACCACCGGC TGA GCCGGTGGTTATGA       TTATTTATCTTTAGT 100 121
LQRI_RS04230 NONE
LQRI_RS04235 NONE
LQRI_RS04240  950524 ..  950538 +  -2.1  -3.83561   AAATAAGTACAATCA               TCAGA ACCGG TCTGG               ATTTTTTTGCAGGCG  51 480
LQRI_RS04265  956393 ..  956411 + -14.6  -3.28791   ATTGTTTAAAGAAAA             CCACTGGC TAT GCCAGTGG             TTCTAAAGAGACAGT 100 127
        tnpA  957081 ..  957110 + -11.5  -4.57569   CCTTATAGGGCTAGA       GCA-AACCACCGGC TGA GCCGGTGGTTATGA       TTTTTAAACAGCTAC 100 121
LQRI_RS04285 NONE
LQRI_RS04290  960427 ..  960461 + -13.1  -4.19177   TGATGTACGGCGAAA     CTTAGTGGTATGAGT AATAA ACTTATACCGCTAAG     TTTATGTTGAAAAAT 100 198
LQRI_RS04295 NONE
LQRI_RS04300 NONE
LQRI_RS04305  964749 ..  964759 +    -4  -3.26405   ATTACAAGGGAAAGT                 TCAT AGG ATGA                 TAGTTTTTGAATGGA  49 20
LQRI_RS04310  966980 ..  967009 +  -7.9  -5.76237   ACCGCAGAAGTGAAC       AGCTTTTGTCCCT GTCG AGGGATAAAGGCG        TTTTTTATTTATATA 100 333
        trpB NONE
        trpA  969013 ..  969046 +  -7.5  -5.02476   ATAAATGTGTTCAAG     CACATCTGTGGGTAAG TGT CAT-TCCGCAGATGTG     TTTTTTGCACCCTGT  89 37
LQRI_RS04325  970109 ..  970123 +    -5  -2.94232   AAGAATTTATGTTTG               CCTGAA ACT TTTAGG               ATTGTTTGACAGGAA  51 57
LQRI_RS04340 NONE
LQRI_RS04345 NONE
LQRI_RS04350  976019 ..  976036 +  -9.9  -3.31416   AAAATATAGAGCATA             GGAGAGT GTGT ACTCTCC              TTAAATATTTGTTTT  82 25
        mntR  979558 ..  979568 +    -4  -5.06451   AATGTTGGAGCACCT                 TCTT TCA AAGA                 TTTTTTGGGCTAATG  70 421
LQRI_RS04375  986816 ..  986838 +  -4.8  -3.86935   AATAATATATTGACA           TACCGGTATC CGT GGGACTGGTA           TTGTTATGCTCATTG  60 42
LQRI_RS04380  987456 ..  987480 +  -2.2  -5.54079   GAAGAGTCAAAAAAA         GAAAGATTGGT TTTT GCCG-TCTTTC          TTTTTTGATTTTTAA  74 124
LQRI_RS04385  990285 ..  990306 +  -8.7  -6.01187   AAAATATCGTGTTAA           CCCTGCAAA GTTT TCTGCAGGG            TTTTTTTATTTGCTT 100 76
LQRI_RS04390 NONE
         cls  993058 ..  993083 +  -5.5  -3.57263   TTGAGAAAACGGGTG         GGAATGGTGTTT CAA AAAC-CCAATCC         TTTCCCGATGGAAAT  59 212
LQRI_RS04405 NONE
LQRI_RS04410  996038 ..  996073 + -15.5  -5.21709   TACCGTGGAGTTTAA    CCCTTCACCCCTGCG TATGTT TGCAGGAGTGAAGGG     TTTTTTGATATACGA 100 370
LQRI_RS04415  998115 ..  998165 + -13.7  -4.00742   TTTAGGACGTAAAAT CAGCCTTCATATCGTCTGTGTTCCT TAA AGGTA-ACA-ATGATATGAAGGCTG TATTTTAATTTTTAT 100 95
LQRI_RS04435 1001671 .. 1001687 +  -2.2  -3.05521   ATAAGACACTCTTAA              GTTACG ATAAA CGGAAC              TCTTAAAGGTGTGAT  42 37
LQRI_RS04440 1002172 .. 1002193 +  -5.9  -2.51609   ATTTGATACGGGCAT           TTTCCTGCA ATTT TGAAGGAAA            CATTTTAATAGTGTT  54 51
LQRI_RS04445 NONE
        secA 1005616 .. 1005652 +  -6.7  -3.14211   GCAAAGCAAAAAGGG    GGTTTGCAAAAAAGG CATAACC CCATTTTTGCAAAGC    TTGGTCGGGGGAGGT  62 62
LQRI_RS04455 1007070 .. 1007080 +    -4  -4.11394   GAGGCGGGGGTTAAT                 TCTA TGA TAGA                 TTTTAAAAATGAGCT  58 134
LQRI_RS04460 1008233 .. 1008244 +  -5.8  -2.96933   CAGCCAGCAATGAGG                CGGA AAAG TCCG                 ATTTAATATTAATAT  56 28
LQRI_RS04465 1009674 .. 1009686 +  -6.3  -3.56643   ACTACAATGATAGAA                TTGCA TTT TGCAA                TTTGGAACATATGCG  62 223
        thrC 1011232 .. 1011278 +  -7.5  -3.19513   TTGGTCTGTAAAACT GATTAAATTTCGGGTTTCACTT AAAA AAGTGAAACCCGGG-TCCAATC TTAAATTGCACTTGT  69 30
LQRI_RS04475 1011860 .. 1011891 + -11.7  -4.32201   AAGGATAAAAATATA      CGGGCGCATTT ACAGACGGAA AAATGCGCCCG       TTTTAAATTCATTCC 100 40
LQRI_RS04485 1014877 .. 1014894 +  -6.3  -6.08342   ATTAAAGTTAGAAAA             CACTCTG ATGA TAGAGTG              TTTTTTTGTTTATTA 100 75
LQRI_RS04490 NONE
LQRI_RS04495 NONE
LQRI_RS04500 1018207 .. 1018231 + -15.1  -5.13137   CTGTCGGGTTTTAAG          GGACTGTGACT TAA AGTCGCAGTCC          TTTTTAATTTGTTTG 100 47
LQRI_RS04505 NONE
LQRI_RS04510 NONE
LQRI_RS04515 1025937 .. 1025953 +  -9.4  -4.26881   CGCTGAGGATTCGGA              GACGGG GAAAA CCCGTC              TTTAGTTTTGTCAAA  90 317
LQRI_RS04520 1027384 .. 1027398 +  -4.2  -4.82901   GAGATACTCTTAAAT               CCCGTG AAG TATGGG               TTTTTATCGCAAGGA  68 420
LQRI_RS04530 NONE
LQRI_RS04535 1034605 .. 1034628 +    -4  -3.36671   GGCATGTATAACATA          TTTATGGTAT TATA ATGCTATAAA           TTATGGAATTAAAAT  49 189
LQRI_RS04545 1035136 .. 1035146 +  -2.6  -3.71156   AATTGGAATATATTG                 TATA ACG TATA                 TTATGTGTTGGATTT  48 125
LQRI_RS04550 1037398 .. 1037419 + -12.3  -5.63517   ATTAAAAGTTAAAAA           GGCGGAGCA TGTA TGCTCTGCC            TTTTTTGTTTAAAGA 100 65
        tnpA 1038131 .. 1038149 +   -16  -3.55487   TAGGGCTAGAGCAAA             CCACCGGC TGA GCCGGTGG             TTATGATTAATATAA 100 126
LQRI_RS04560 1039097 .. 1039115 +  -3.2   -2.7555   TTATGGGCAAATTGA             CAAAATGT ATA AAATTTTG             TAATATTAAAATATA  42 81
        rfbC NONE
LQRI_RS04570 1040343 .. 1040363 + -12.7  -3.99805   GTTTTTATACAAAAG            GCATCTACA TTT TGTAGATGC            TTTAAATTTTTGGAG 100 49
LQRI_RS04575 1041755 .. 1041769 +  -2.9   -3.3452   GGAACATGTAACTTT               TCATT TCCAT AATGA               TTATGCAATGATATA  46 115
LQRI_RS04580 1043276 .. 1043287 +    -3   -2.7317   TATACCTATAAGTTA                TATG AGTT CATA                 TGATTGAGGGTGTAT  42 103
        loaP 1044140 .. 1044151 +    -3  -3.75653   GACTATTAAACTAAG                GTAT TACT ATAC                 TGTTTTGCATTGATT  50 145
LQRI_RS04590 1045340 .. 1045350 +    -4  -3.19051   TAATTATGTTGATGA                 GAAA AAT TTTC                 TATCTGTGTTTGTTG  49 122
LQRI_RS04595 NONE
LQRI_RS04600 NONE
LQRI_RS04605 NONE
LQRI_RS04610 NONE
LQRI_RS04615 NONE
LQRI_RS04620 NONE
LQRI_RS04625 NONE
LQRI_RS04630 1053386 .. 1053397 +  -2.2  -3.57144   TTAACGTGTTCATTT                TGCC AGAC GGTA                 TTTAAAAATACCAAG  47 212
LQRI_RS04635 1054830 .. 1054842 +  -4.9  -2.67747   AGAAAGGAGTTTTAA                GTTTT TAA AAAAC                ATTATAATATGAAGA  50 49
LQRI_RS04640 NONE
LQRI_RS04645 1055778 .. 1055797 +  -8.6  -5.60993   TTCCATTTTAAAAAA            GATGCCTG TTAG TAGGCATC             TTTTTTTCTCAAAAC 100 30
        rpsU NONE
LQRI_RS04660 1058335 .. 1058353 +  -8.9  -5.72616   GGCTAAGACAAGAAA             GCTCGAT AAAAG ATCGAGC             TTTTTTTATATCAGT 100 35
        recJ NONE
LQRI_RS04670 1061585 .. 1061604 +  -2.7  -2.60079   GATGTAATGAATATA            TGGGCGC AATGGG GCGCACG             TAAATTGTGAAATCA  40 53
LQRI_RS04675 NONE
         dtd NONE
LQRI_RS04685 NONE
        hemZ 1066877 .. 1066897 +  -4.9  -3.34589   GAAATATATTTGATT            TTGTAATAT TTT ATATTATAA            TATATTTCATCTTGA  54 381
LQRI_RS04695 NONE
LQRI_RS04700 NONE
LQRI_RS04705 NONE
LQRI_RS04710 1071183 .. 1071205 +  -5.1  -2.60794   GTGATTGGCATGTAA           TTTATATAA TTAGT TTATATAAA           AATTTGTATTTTTTA  50 37
LQRI_RS04715 1071501 .. 1071538 + -10.7   -5.8901   GTTATCTTAGGGCTT   GGTTATATTAGGGCATG AGCT TATGCCCTAATAGATCC    TTTTTTCTTTTATCT 100 62
LQRI_RS04720 NONE
LQRI_RS04725 1073109 .. 1073128 +  -5.8  -4.88687   AAACATATTCACTGT            TGGCAAAA GTGA TTTTGTCA             TTGTTTTTTATTTCA  79 91
LQRI_RS04735 1076587 .. 1076620 +  -8.9  -3.85704   CACCGCGGGAAAACA     GCCTCTCGTCC CTGGCATTTGTC GGACGGGAGGC      TTTAGTAATTAGTAG  81 395
        hisS NONE
        aspS 1079846 .. 1079876 +  -3.3  -5.25803   CAAAGGAACTAAAAA       GCATGGGTGTA AAAATGTCC TGTACCCGTGC       TTTTTTATACCGATT  72 95
        lepB 1080744 .. 1080764 +  -4.9  -3.67297   AATTTTGGGTTTTGA            TTTATATAT ATG ATATATGAA            TTATATATATATAAT  58 157
LQRI_RS04755 1085279 .. 1085302 +  -9.7  -5.71712   ATTGTATAAAAGAAA          CTACTTTGG ATATAC CCAAAGTAG           TTTTTTTATGTAAAG 100 75
LQRI_RS04765 1087343 .. 1087362 +  -5.8  -3.19192   TTTTTTACAAAATTG            TTGCAATA AAAT TGTTGCAA             TTAAGTTACATAAGA  59 69
LQRI_RS04770 NONE
        lepA NONE
        hemW NONE
        hrcA 1092186 .. 1092197 +  -2.2  -3.14931   AGAAATTACAGGGAG                GGTT ATAC GACC                 TTGATGAAAGATGAA  42 121
        grpE 1092945 .. 1092957 +  -3.5  -3.53563   AGAATTCACTTAAAC                TTATA CTT TATAA                TTTAAGGAGGAGTAT  50 89
        dnaK 1094848 .. 1094882 + -11.7  -4.13183   CATCACAAAAGAATG    TAAG-GCCAAAGTCAT GAAT ATGGCTTTGGCTCTTA     TTTAATTTCACTTTT 100 69
        dnaJ 1096158 .. 1096168 +  -3.2   -2.9155   TAATAAAATGAAAGA                 TGCT TTG GGCA                 TGTAGTATTGGAGGA  43 10
        prmA NONE
LQRI_RS04810 NONE
LQRI_RS04815 1098371 .. 1098392 +  -5.8    -3.745   ATTAATTGGTAGCAA           GGGTGCGT ATTGGA AGGCACCC            TGTTTTAGTGAATCA  62 171
LQRI_RS04825 NONE
LQRI_RS04830 NONE
         gmk 1100381 .. 1100407 +    -3  -3.30443   TCAGTTTGAACACAA         CTGATGATTTTG ATG CAGAGTTAACAG         TTCATATAATGCTAA  46 22
        rpoZ 1100772 .. 1100810 +  -9.1  -4.83715   AGGTGGTTTTTAAGA   GATTGAGATTGCGATTT AATCA AAATCGAAATCTTGATC   TTATTTTTTTAAGTT  93 117
       coaBC 1102118 .. 1102153 +    -3  -5.02476   AGTGCGAACCACTGG    TATATAATTTAAAATAT TAT ATAATTTAAA-TATATA    TTTTTTGCCGGATAT  67 68
LQRI_RS04850 1103632 .. 1103660 +    -4  -5.42131   ATTGCTAAAGAAAAG        GGATATTACT GGGATTGTA GGTAATATCC        TTTTTTATATAATTA  77 52
LQRI_RS04855 1105568 .. 1105584 +  -2.3  -6.04324   AAGTACCATGTAAGC              GACAATT TTT AATTTTC              TTTTTTGTTTTTTAC  86 487
        ppdK 1110325 .. 1110352 +  -8.5  -5.47821   AAAGGTATATATTAA        CACCCTATCAT GTAAAA GTGGTAGGGTG         TTTTTTTAAATACAT 100 76
LQRI_RS04875 1112788 .. 1112802 +  -5.8  -3.37773   CAATCATATACAAGA               TTTACT ACA AGTAAA               ATTGTTTTTTGCATA  61 12
LQRI_RS04880 1113083 .. 1113105 +  -8.5  -5.53079   TAATAAATTAAAAAA           CGTCTATGT TTCAT ACATAGGCG           TTTTTTGTATGTTTT 100 42
LQRI_RS04890 NONE
LQRI_RS04895 1116048 .. 1116065 +  -2.1  -3.65996   GATTTGACAAATATT             TTTTTAT TTAA GTAAAAA              TCTTTCTATATAAAA  47 103
LQRI_RS04900 1117680 .. 1117702 +  -7.1  -4.54026   TGGACAAGCAAAAGT           TTCAAGGAG TTTTT CTTCTTGAA           TTATTTTGTTTGACG  79 324
LQRI_RS04905 1119680 .. 1119713 + -10.4  -4.28018   ATAGCGTTTTAAAAA     GAGCCCGGCAGTA AGAAGAAAA TAC-GCCGGGCTC     TTTTGCTAAAATATT  95 58
LQRI_RS04920 NONE
LQRI_RS04925 1123298 .. 1123320 +    -7   -5.8901   GCGAAAAACAAAAAA           CACCTTGAAG AAA TTCCAAGGTG           TTTTTTGTTTTATAT 100 66
        cobT NONE
LQRI_RS04935 NONE
LQRI_RS04940 1125970 .. 1125997 + -15.8  -5.35365   GAAATCTATTTTTGA        TTGTCCGGATTA AAAA TAATCCGGACAA         TTTTTATTATATTTT 100 26
LQRI_RS04945 1127877 .. 1127890 +  -3.9  -3.02043   ATAAATATGTACTCT               TTTCT TTTG AGAAA                TATTGAAAAAGGCTT  48 155
LQRI_RS04950 1129106 .. 1129122 +  -6.5   -4.7339   CTTGCAATTCGTCAT              ATCCGGT TAC ACCGGAC              TTTTTCGGATTTGTT  80 170
LQRI_RS04960 1131609 .. 1131628 +  -2.8  -4.64159   GAAGACTGGCTATTG            TCGGATGC AGAG GAATTCGA             TTTCTTGTTGTTTAT  62 307
LQRI_RS04970 NONE
LQRI_RS04975 NONE
LQRI_RS04980 NONE
LQRI_RS04985 1136130 .. 1136147 + -11.3  -4.67173   CGTTGCATATCAGAG             GCGGCTT GTAA AAGCCGC              TTATTTTTTACCTTA 100 43
LQRI_RS04990 1137743 .. 1137753 +  -2.6  -3.83705   CAAGGATAAAATGGA                 TATT ATT AATA                 TTTAGTAGTAATTTT  51 75
        glgA 1139331 .. 1139347 +  -8.7  -5.37043   ATATTAAGCAAAAAA              GTCCGGT TTT ACTGGAC              TTTTTTCTATAGCGT 100 56
         nth NONE
LQRI_RS05005 1141897 .. 1141911 +  -3.6  -4.81306   TGAGAAAACAATGCT               TTCAAA TAA TTTGGA               TTCTTTTTTGTTCCA  67 117
LQRI_RS05015 1143138 .. 1143173 + -10.6  -4.81752   AGAAAAAATAAAAAA    GTGTATCACATTCTTT CTAA GAAGCATGTGGTACAC     TTTTTCGCTGTTTTT 100 210
        recG NONE
        rsmD 1146335 .. 1146352 +  -2.7  -2.52896   ACTGCTGTATCCTTT             TACAGGT TGAA ATCTGTG              TGACTTGACAAATAA  40 5
        coaD NONE
LQRI_RS05040 1147566 .. 1147578 +  -2.7  -3.23045   AAGAAGCCGTAAACG                GTAAT TTC ATTGC                TATTGATATATAAAT  44 251
LQRI_RS05075 NONE
LQRI_RS05080 1158150 .. 1158161 +    -3  -3.49878   AATTCCTGCCTCAAA                CTTT GTTC AAAG                 TTGTAAATTTGCTTA  48 47
LQRI_RS05085 NONE
LQRI_RS05090 1162842 .. 1162884 + -12.9  -4.43397   TTGGCATGAAAAATA TGTGCATGCGTCACCTT CCGTTGTTA AAGGTGCTGCATGCACA TTATTTGTTTTGAGA 100 62
LQRI_RS05095 1166677 .. 1166710 +  -5.5   -3.3568   CAAAGTCTCGTAACC     TTTGC-CTAAAATTCA TAT TGATTTTTGGTGCAAA     TTAATATATAGTTAT  56 28
        mtrB NONE
LQRI_RS05105 1167224 .. 1167250 +  -8.1  -3.84648   AGTTTTTTTTATTAT         CCCGTGTTT AGCCTCTTA AAACACGGG         TTTAATACTATTAAG  77 55
        pfkA 1168287 .. 1168303 +  -2.3  -5.47914   CAATTTGATTTGCTT              TAGTTGT TAC GCAATTA              TTTTTTATAATTTTT  71 58
LQRI_RS05115 1168787 .. 1168802 +  -3.4  -5.44721   TTAAATAAGGCTGTT              TTATAA ATTG TTATAA               TTTTTTTAAGGTGGT  76 20
LQRI_RS05120 1169772 .. 1169801 +  -8.9  -3.37142   GTGGAGGAGGGTGAT       TATGAAAAAAATA AGAG TGTTTTTTTCATA        TCTTGTGGTATTTTG  77 431
LQRI_RS05125 1170547 .. 1170566 +  -2.2  -4.04209   ATTTCACAGTATAAT            TTATAATG CATC CTTTATAA             TTTGTCATAGTTTGG  52 20
LQRI_RS05130 NONE
LQRI_RS05135 1176175 .. 1176218 + -12.8  -4.06055   TGGGTTTGGTGCAGA TAAAAGGTAATGCCGAAGTAT ATA AAACTTCG-CATTACCTTTTG TTTAATTTAAGAAAT 100 42
LQRI_RS05145 1180376 .. 1180404 +  -3.9  -3.57144   TTTGCGGTGTAAATT        CTTAACTGTCACA AAG TATTACGGTTAAG        TTTAAAAATAAAAAA  53 21
LQRI_RS05150 1181942 .. 1181962 +  -5.3  -5.27938   GTTGTATCGGTTTGG            AGGGTTGGT TCT GCCAGCCCA            TTTTTATTTCAAACT  80 250
LQRI_RS05155 1183418 .. 1183453 + -17.2   -4.4767   GCTATGAATATTGCA    CATAAAAGTTTGATCC GATT GGATCAGACTTTTATG     TTTTCTGATGGCTAA 100 34
        purE NONE
        purF NONE
        purM NONE
        purN 1187339 .. 1187350 +  -2.2  -3.40592   GTTGACAGAAAGTTT                GCAG AATT TTGC                 TTAAGTTTTGCTATA  46 41
        purH NONE
        purD 1190212 .. 1190236 + -13.7  -5.04325   GGATATAGGAAAAAA          GTAGGAGAGCA TAA TGCTCTCTTAC          TTTTTATCCTTTAAA 100 22
LQRI_RS05195 NONE
        nadD 1193454 .. 1193476 +  -3.6  -3.40522   ATTTTTTAAATATTT           TTACTTTA ATAATGG TAAAGTAA           TTCTAATACAGAGGT  50 124
        yqeK NONE
LQRI_RS05210 1194690 .. 1194705 +    -4  -5.06414   GAGATGACTTTAATC              CTTGAT TTTT GTCAAG               TTTTTATTCACAAAA  70 21
        rsfS 1195240 .. 1195265 +  -2.6  -4.39287   AAAGATGTAATTGGA         CTCCATTAAG GATACG TTTATTGGAG          TTTTGATATAATTAA  58 68
        leuS 1197828 .. 1197855 +   -10  -5.07941   GTTTTATACTTTTTG        GCAGGGATGGTTT GAT AAACT-TCCCTGC        TTTTTATATGATTTT 100 62
LQRI_RS05225 1223201 .. 1223252 + -14.7   -5.0095   GTTGTCGGTTAGGAG TTGCCATTCCAGACAGAAAACGT GTTGCA ATATTTTCTGCCTGGAGTGGCAA TTTTGTTCTATTTTT 100 48
LQRI_RS05250 NONE
LQRI_RS05255 1230262 .. 1230279 + -11.3  -4.61747   ATGAAAAAAAGATGG             GCTGGCA GATA TGCCAGC              TTTTCTAGTTATTCC 100 65
        thrS 1233334 .. 1233345 +  -4.4  -2.88544   TATGAAGATATCACG                TCGA TATG TCGA                 TATCTGAAAATGAGA  49 423
        thyA NONE
LQRI_RS05275 1234974 .. 1234995 +  -8.1  -5.53288   TTTTGTGAGGGATAA           GTGGATCAT TTTA ATGATTCAC            TTTTTTTGCATTAAA 100 201
        infC NONE
        rpmI NONE
        rplT 1236222 .. 1236242 +  -7.6  -5.90981   ATGAAATTAAAAGGG            GAGAGCTT TAAAT AGGCTCTC            TTTTTTTTGATATAA 100 88
        rlmB 1237317 .. 1237341 +  -2.2  -4.68124   TATGAAAACAGGAGT         TG-ATAGATGC AGAT GCAACTATACA          TTTTATATCTGTTGG  59 233
LQRI_RS05300 NONE
LQRI_RS05305 1247047 .. 1247057 +  -5.4  -3.28256   GTGGACATATTTGAG                 TCTC CCG GAGA                 GTTTGTTTGAATATG  56 5
LQRI_RS05330 NONE
LQRI_RS05335 1253131 .. 1253141 +  -2.6  -3.39483   AATTTTCCCATATAA                 TTTT ATC AAAA                 ATTTTTGGGTGGGAT  46 454
LQRI_RS05345 1254546 .. 1254556 +  -2.6  -4.37092   TAGTACAATATTAGT                 TAAT GGT ATTA                 TTTTGTGAGGAGAGT  58 259
LQRI_RS05350 1256002 .. 1256032 + -18.6   -4.2349   ATAAAGTTTTGAAAA       TAAACCCTGTTTTC GAA GAAAACAGGGTTTA       TTTTAGATGTGGGGG 100 83
LQRI_RS05365 NONE
LQRI_RS15850 1259361 .. 1259398 +  -9.9  -3.06341   TGCGGATTCAATAAA   T-CCGCCACTTCCTGCAG CTC TTGCAGTAAGCGGCGGCA   ATTTTAAGCCATGTT  81 106
LQRI_RS05375 NONE
        yhbH NONE
LQRI_RS05385 1266066 .. 1266106 + -11.4   -5.9663   TAAAATCTGTTAAAA G-AGCTTTTTCCGGCTTTA AAGC TGAAGTCGGAAAGAGCTGC  TTTTTTTTGGTGTTT 100 38
LQRI_RS05390 NONE
LQRI_RS05395 NONE
LQRI_RS05400 NONE
LQRI_RS05405 NONE
LQRI_RS05410 1271222 .. 1271234 +  -7.7  -5.64421   AGAGGATAAATGTTT                GAGAC AAA GTCTC                TTTTTTATTTAAAAT 100 70
LQRI_RS05420 1274943 .. 1274960 +  -5.5  -2.60075   AAAGAAATGAAGCTG             CAACCAG GAAA CAGGTTG              GTTGATTCAAAAGGC  52 268
LQRI_RS05425 NONE
LQRI_RS05430 1276898 .. 1276922 +  -7.2  -4.35926   GAATTTTATATAATG         CGGGCGGTAAT GGTA ATT-CTGCCCG          TTTTAAATTTAGACT  79 122
LQRI_RS05435 NONE
LQRI_RS05440 1279208 .. 1279240 + -15.8  -3.49182   ATAAAATATTACAGG     GGGGTTCA-GGAAAC CAGA GTTTCCCTGAACCCC      TTGATTATACTATAT 100 286
LQRI_RS05450 1281854 .. 1281882 +  -6.7  -4.40652   GATTAAAATCCTGAA        GCCCGGCAG AAATACACCAA TTGCCGGGC        TTATTTTGTGTCCTT  78 42
LQRI_RS05455 1283117 .. 1283136 +  -7.2  -4.49389   AATCCAGAAATTTAT            TTGGGGAA AAGG TTCTCCAA             TTTTAGTTATGCGGT  81 387
LQRI_RS05480 NONE
LQRI_RS05485 NONE
LQRI_RS05490 NONE
LQRI_RS05495 1290251 .. 1290265 +  -6.4  -2.93164   ACATTCTTCAGAAGA               CAGAGG TGC CCTTTG               TGTGATTAAATGTGA  58 6
LQRI_RS05500 NONE
LQRI_RS05505 NONE
LQRI_RS05510 1294453 .. 1294489 +  -3.8  -5.98675   AGTAAAAATAAAAAA    CTGTTGCAAAAAACAT GACCA ATCAGTTTTGCAACAG    TTTTTTATTTTTGTC  90 36
LQRI_RS05515 1295481 .. 1295493 +  -3.4  -2.77029   AAAAACTTCCATTAA                GCAT TTGGC ATGC                CTTTGCCCGTATTTA  44 26
LQRI_RS05520 NONE
LQRI_RS05525 NONE
LQRI_RS05530 1298654 .. 1298697 + -25.6  -4.14615   CCCTCTTTGTGATAG CAGCGAAGCCTGCATAAAGG TCCT TCTTTATGCGGGCTTCGCTG TTTTAAGCGATTTTT 100 112
LQRI_RS05545 1301827 .. 1301844 +  -4.1  -2.56828   CGCTTTCCGGACAAA             GTTCCTG ACAG CAGTAAC              ATCTTATACATCTTT  44 110
LQRI_RS05555 1305194 .. 1305215 + -11.6  -4.18802   TTGTATGTTAATCAG           GCCGCAGA AGCTTC TCTGCGGC            TTTTAACATATATAT 100 497
        dapB 1306276 .. 1306299 +    -6  -5.20328   CTGTTCTGAATACAA          GCTATGG-GCA TAA TGCTCCACAGC          TTTATTTTTTTGCGA  83 105
LQRI_RS05565 1307657 .. 1307682 +    -2  -2.96274   ATATTATCTGAAGAA         TATAAACAGA ACCGTC TCTATTTATA          TCTCCTTATACCAAA  41 131
        amrA NONE
        amrS 1310741 .. 1310751 +  -5.4  -3.12976   TTTTTAACGTTGGCA                 CTCA GAG TGAG                 GTTTTCAAATGTTTT  54 132
        cdaA NONE
LQRI_RS05585 NONE
LQRI_RS05590 1314551 .. 1314563 +  -3.5  -3.98204   AATAATATAATATAG                TTATT ATG AATAA                TTTATAAATATATTT  56 127
        glmM 1316302 .. 1316314 +  -7.7  -2.57344   TTATCGAGTTTTCGG                CGGAA ACC TTCCG                GTTGTCACGACCGTC  64 319
        glmS 1318389 .. 1318429 + -11.2  -5.04249   AAGTTCGTTCCAAAA  TCCCGTAGCAGATGCAGG AGAAA TCTTCATTTGCTGCGGGG  TTTGTTTTTTGAAGG 100 121
LQRI_RS05605 1319533 .. 1319554 +  -4.6  -2.78384   AAATTAGTCACTATA           TGATTATA ACTGAA TATAATCA            TATAGTAAGAACAAG  48 95
        arsB 1320644 .. 1320656 +  -3.4  -3.28924   ATAGTACAAGGCATT                GGTT TCAAT AACC                TTGTAGAAAAAGGTG  48 15
LQRI_RS05615 1321214 .. 1321231 +  -6.3  -3.04263   TAGCCATGATATTCG             GTTGGTT AAAT GACCAAC              TATTAAAAATGAGAT  59 159
LQRI_RS05630 1324103 .. 1324117 +  -4.2  -2.94099   CAAACCCCGTCCTCA               CCGG AAGGCAG CCGG               TCTGTCATAACAGAC  47 59
LQRI_RS05635 1324705 .. 1324715 +  -2.6  -3.37028   TAGTATAAACTATAA                 TTAT AAA ATAA                 TTATAAAATCTTCAT  44 224
LQRI_RS05640 NONE
LQRI_RS05645 1328431 .. 1328444 +  -3.1   -3.8969   CATGTCTTACTCATA               GCTTG AAAA TAAGC                TTCTTGTATCAATGG  52 190
LQRI_RS05650 NONE
LQRI_RS05655 1330634 .. 1330669 + -13.2  -3.85698   GTATTTTAAGTTGTA    ACTTGTCCCGGTCGGC ATGA GCCGGCCGGGAAAGGG     TTTATAAGAGACAGA 100 59
LQRI_RS05660 1331266 .. 1331276 +    -4  -3.24245   TCAATTGTCAGATAT                 TGAA GCA TTCA                 TTGAATTATAAATAC  49 23
LQRI_RS05665 NONE
LQRI_RS05670 NONE
LQRI_RS05675 1333741 .. 1333752 +    -3   -4.0827   TGGAATCGTAAATAA                CATA GTTT TATG                 TTTATATAGATGTGT  55 47
LQRI_RS05680 1336329 .. 1336339 +  -2.6  -3.53184   AACTTGGTATTTATT                 TATA TAA TATA                 TTCTAAATTTTAATA  46 9
LQRI_RS05685 1337709 .. 1337734 +  -8.4  -5.49234   ATCTGCTCATAAAGA         GTTCTGCATG AAAATA TATGCAGAAC          TTTTTTGTTGAGTAT 100 72
LQRI_RS05690 NONE
LQRI_RS05695 1338824 .. 1338858 +  -6.5  -3.08046   TCTTTATGTCTGAAA    TGTCCTGCCT-GGCAA ATGT TTGCCCAGGAAGGAAA     ATTTTCGACTCCAGG  59 42
LQRI_RS05700 NONE
LQRI_RS05705 NONE
        folD NONE
LQRI_RS05715 1345211 .. 1345228 +  -2.7  -2.50471   TAAAATGAAAAAGTA             CGTAAGT AAGT GCTTATG              GATTTTGAATATTTG  40 80
         rny 1346866 .. 1346895 + -18.1  -3.95071   TTTGGATATTTTCTG       CACAAAAAGCGTG GACT CACGCTTTTTGTG        TTATTTAAGAGTTTA 100 43
LQRI_RS05725 1347767 .. 1347780 +  -5.3  -3.17206   TTGATTAAAAAAGTT               TTGCA GTGC TGCAA                TATTACTAAATATTA  54 37
LQRI_RS05730 1348215 .. 1348259 + -16.9  -4.19817   AAAAAGATATTATCC TTGCATAAAAAATACTGCCC TTTTTT GGGCAGT-TTTTTTATGCAA TTTTGCATAAGTCCA 100 53
LQRI_RS05735 1349209 .. 1349242 +   -14  -4.29738   GAATAAGCCATAAAA     CGCGCAGAACTGCA ATAAGC TGCAGTTCTGTGTG      TTTTACTGCCTGTGG 100 35
LQRI_RS05740 1349541 .. 1349562 + -12.3  -4.30559   TATTAATTATTGTAA           CCCCATCTG AAAT CGGATGGGG            TTTTAAAATTTTATT 100 35
LQRI_RS05780 1358725 .. 1358751 +  -6.6  -5.37593   GAATTCATCCATATT         GTCAACATCC ATGCACG GGATGTTGCC         TTTTTTCATTTCCGC  93 313
LQRI_RS05795 NONE
LQRI_RS05800 1361377 .. 1361434 + -11.7  -5.06414   AATCCAATGTATAAA TATTGTAGGCCTTAAATTTTGTACTATA TTT TA-AGTACATTATTTAAGGCCTGCAGTG TTTTTATTGGGAGGC 100 178
        pdaA NONE
        yqfC NONE
        yqfD NONE
LQRI_RS05820 NONE
LQRI_RS05825 1367295 .. 1367319 +    -3  -4.18018   TCTCTGGAATAAGTG          TTTTTAAGAA ATGAC TTCATAAAAA          TTTTAAATAAAAAGA  57 29
        ybeY 1368026 .. 1368040 +  -2.2  -2.94912   ATATTGGGAAAAATA               TTTTTA AGA TAAAGA               TATATAAGTTAAAGA  41 171
         cdd 1368492 .. 1368514 +  -5.1  -4.07568   TTTTGAAATTGGCGG           TTTTAAAAT ATGAC ATTTTAAAA           TTTTGACACCGGAGG  62 35
         era 1369455 .. 1369468 +  -6.7  -3.09193   AACTCTTGTGTAAAA               CAGCA TTCA TGCTG                TTGCATAAGTGTGGT  62 49
LQRI_RS15635 NONE
        recO 1370918 .. 1370954 + -11.7   -3.0663   AGACAGTTTTGTTTT    CTTTGAATCAATGCTTG GGG CAAGCGTGGATGCAAAG    CTTATTTATCATAAT  89 449
LQRI_RS05850 1371810 .. 1371833 +  -7.4  -5.36314   ATTTAGGAGATATTA          GTCTTTCCGC TGTT GAGGAAGGAC           TTTTTTAATATTTTC 100 138
LQRI_RS05855 NONE
        thiI NONE
LQRI_RS05865 1375867 .. 1375885 +  -3.2  -3.48395   TATAAAAAAGAGGGA             TGGATTAA TGC TTGATTCA             TTGTATAACAAGAGT  48 36
LQRI_RS05870 1376558 .. 1376568 +  -2.6  -4.59853   GCAAAGGAGAAAGCA                 TAAA AAT TTTA                 TTTTTGCCCGATTAA  60 23
LQRI_RS05875 1378027 .. 1378047 + -10.5  -5.82172   TCTGTCTTTTCGGAG            GTCAAATCC TTT GGATTTGGC            TTTTTTTCTATTCCT 100 367
LQRI_RS05880 1379383 .. 1379401 +  -7.4  -5.75342   AGCGAAAAGACAAGA             CACCGG GAAATAA CCGGTG             TTTTTTTTCAGACAA 100 52
LQRI_RS05885 1379759 .. 1379790 + -10.2  -3.03441   AATCTTAAGTTAAGA      GACTGTAGAGGCTT AAAA GAGTCTCCACAGTC       TCTTGACAAATCGTA  81 98
LQRI_RS05910 NONE
        murJ NONE
        recA 1390092 .. 1390121 + -13.1  -4.13571   TAAAGTGAATTTTGT       TTAGGTGCATATC GCAG GATATGTACCTAA        TTATATTTTATTTAA 100 113
LQRI_RS05925 1391013 .. 1391028 +  -4.7  -3.78409   ATATAAAAAGAGTTT              TGCGT ACGATA ACGCA               TTTGGATTAAATTGG  60 0
LQRI_RS05930 1392803 .. 1392826 +  -7.4  -3.53091   TTTGGTGTTTTTAAC          CGGGCAAACT TCAA AGTATGTCCG           TTTGAAAGCACCGGT  68 218
LQRI_RS05935 1393444 .. 1393466 +  -9.2  -6.15259   TTAAGCGCAAAAACA           GACACTTGGA AAT TCTGAGTGTC           TTTTTTTTTGCGTTC 100 70
LQRI_RS05940 1395237 .. 1395254 +  -6.3  -5.45802   TCAATCTTCTATACC             GGAG-CTG TAA CAGGCTCC             TTTTTGTTTTGGACA  88 237
LQRI_RS05965 NONE
        murD 1399224 .. 1399247 + -15.4  -5.52384   AACAGATGTAATAAA          CGGTTGGAGT TCAT ACTCCAACCG           TTTTTTTGGTGGAGG 100 68
        holA 1400858 .. 1400885 +   -13  -4.08557   AGCGTGCCTTAAATA        TAAAAACGTACT TTCC AGTACGTTTTTA         TTGTTGTTTGAGGGC 100 86
         gpr 1402490 .. 1402505 +  -3.4  -4.67038   ATGTTGTCCTTAGTA              TAAAAA CAGT TTTTTA               TTTTGCTTTTGCAGG  63 139
LQRI_RS06005 1403531 .. 1403544 +  -5.3   -5.8901   TTATCGAAAAGGAAG               GGAAA TCTC TTTCC                TTTTTTATTTTGTGT  91 104
LQRI_RS06010 1404399 .. 1404414 +    -4  -2.77962   GATTGATTTAAGACG              CGTATG ATTC CATATG               ATTTAAAGTATGGGG  46 41
        ligA 1406474 .. 1406487 +  -3.9   -3.1096   AATTTAGAAAAATGA               TAGAA TAAA TTCTA                CTTTTGCAATATATT  48 18
LQRI_RS06020 1407335 .. 1407352 + -11.3  -5.80727   TGTGCGGACGGGACA             GCGGTCT TTTC AGACCGC              TTTTTTGTTGTTTTT 100 49
        gatC NONE
        gatA NONE
        gatB 1410799 .. 1410810 +  -5.8  -3.07283   AAATTAGAATAGGCG                CCGA AAAT TCGG                 GTTTTAGGACCTTTG  57 41
LQRI_RS06040 1411774 .. 1411795 +  -7.5  -2.76225   ATAAGGAGGGTCTTG           TATACAAAA AACA TTTTGTATA            TAATTAGAGTTGCTT  65 132
         pta NONE
LQRI_RS06050 1414266 .. 1414304 + -15.6  -6.32976   AAAGATGCGTTATAA   TTTTACAAGCCTGTTTTT TTA GGAAACGGGCTTGTAAAA   TTTTTTTATTTTTTT 100 40
LQRI_RS06055 1415036 .. 1415067 +  -2.4  -4.41114   AAAATCGAGTACCTT      CCATGTGTACAAGAT TTT AT-TTATACACAAGG      TTTGTTGTATGGTGA  58 65
        rpmF 1415307 .. 1415327 +  -9.7  -4.94972   TAGAATAGAGTAAAA            GCAGCAGAT ACA AACTGCTGC            TTTTTGCTTATGGTG 100 33
LQRI_RS06065 NONE
         der NONE
        plsY NONE
LQRI_RS06080 1419866 .. 1419897 +  -4.6  -5.77632   AATGTGTGTTGAAAA      GTGAGTAGATTTG GAAAAGA CAAA-CTGCTCAC      TTTTTTTGTGCTTTT  87 103
      spoIVA 1421653 .. 1421694 + -11.2  -3.25791   AGGTGAGAAAATTTT GCAAAGTACTGCCAT-ATA AACTA TATTATGGAAGTACTTTGC CTGTTTTTTATTTAC  85 65
LQRI_RS06090 1423718 .. 1423764 + -11.1  -4.83722   ACATTTTTATAAAGT TAATTGAGTTTAGTGCAGAGCA GAAA TGCTCTGCAC-AGACTCAATAC TTTTATTATAGTCTT 100 68
LQRI_RS06095 NONE
LQRI_RS06100 1425795 .. 1425833 +    -9  -3.10175   CTTTAATTAGTTTTA   TCTGGGCTTTGGCGAAAT TTA ATTTTGTCGAAGCCTAAA   CTTATTTTGGGAGGT  74 141
LQRI_RS06105 NONE
LQRI_RS06110 1427519 .. 1427548 +  -5.3  -4.28747   TATCTGATTACGCCT       TTATTGATTAATA CCTT TATTGATTAATAA        TTATTTGTCTTTAAT  66 75
LQRI_RS06115 1428704 .. 1428714 +  -2.6   -4.0031   TCAGGAAGAACATAT                 TTAT GTT ATAA                 TTATTTGGTGCAAAT  53 463
LQRI_RS06125 1431242 .. 1431258 +  -5.3  -3.81146   GTTGACAAACGCATG              TAAAATA AGG TATTTTA              TTATTGATTCGACAA  61 124
        ytvI 1432703 .. 1432720 +  -2.7  -3.57971   CATAAGATCTTGAAA             TACCCAA CATT TTGGCTA              TTTCCCGCTGGGTCT  48 173
        rpsB 1441604 .. 1441637 + -12.6  -4.29981   GAAGCTTGAGAATTT     TCCGACTTCAGC GTGCTTGTTG GCTGAAGTCGGA      TTTTAGATATCTTTA 100 32
         tsf 1442460 .. 1442488 + -16.3  -4.64144   CGGGTAATGGATGAA        GGGAACATATAAA GTA TTTATATGTTCCC        TTTTTAGGGATTATT 100 45
        pyrH NONE
         frr NONE
LQRI_RS06185 1444054 .. 1444073 + -12.2  -4.19238   CTTATTGTTTGTAAA            CCCCTCTA ACAC TAGAGGGG             TTTTAAAATTCAGAC 100 17
LQRI_RS06190 NONE
LQRI_RS06195 NONE
LQRI_RS06200 1447009 .. 1447025 +  -3.1  -4.15006   TTGGTGTATATATAA              TATATGT TGT ATATATA              TTTTAAAGTACATAT  55 75
        rseP 1448409 .. 1448420 +    -3  -2.75183   AATTAGATTTATAAT                CAAA TAAG TTTG                 TAATTGAATAAAAAT  42 19
        ispG NONE
LQRI_RS06215 1454231 .. 1454269 + -12.6  -4.46112   AAAGCAAATAGTAGC   TTATGGTAAAGAGTGGGT CGG ACCCACTCTTTCCTATTA   TTTCTTTCACTAGAA 100 206
        rimP NONE
        nusA NONE
LQRI_RS06230 NONE
LQRI_RS06235 NONE
        infB NONE
        rbfA 1460386 .. 1460402 +  -3.7  -2.64794   AGACCCTGAAGATAC              TTGAGCA ATT TGCTGAA              TCCTATAAAATTCAA  44 22
LQRI_RS06250 NONE
        truB NONE
LQRI_RS06260 1463322 .. 1463341 +  -7.1    -3.615   GTAAGCGGAGTGAAA            GGGAGGT TAAGAT GCCTCCC             TGTTTATCTAAGCCT  70 49
LQRI_RS06265 NONE
LQRI_RS06270 1466311 .. 1466325 +    -5  -2.55508   AAAAAAGGGGGATAA               TTATGG AGA CCGTAA               ATGTTGTGAAGTTTC  50 41
         lgt 1467393 .. 1467414 +  -4.5  -2.67477   AAAAACAAATAAGGA           TGTCAAAAT TTTG GTTTTGACG            TCGTGTAGCTTAATT  48 143
LQRI_RS06280 1467749 .. 1467767 +  -3.2  -4.04719   TGTAAATGAGCTTGG             CAGTAGTT TTT AATTATTG             TTTGTAATATATGGT  55 164
        rodA 1469046 .. 1469075 +  -6.6  -5.60993   AACTAAATTTATCAT       GAAAAGATAGGA CTAGTT TCCTATCTTTTG        TTTTTTTATCAGGAA 100 121
        mraZ NONE
        rsmH 1470980 .. 1471012 +  -5.6  -4.48664   TTTTTGATTGATTAT     TCCGGGTGGGTATGCT TTT AGC-TGACC-CCCGGA     TTTGTTGTCTGTTTA  69 384
LQRI_RS06300 1471648 .. 1471671 +  -3.3   -3.5394   ATTTTAAGTAAGCCT          TAAGAAGAA ATACAG TTCTTTTTA           TTTGGGGCAAGATTT  50 125
LQRI_RS06305 NONE
LQRI_RS06310 NONE
LQRI_RS06315 NONE
        mraY NONE
       spoVE NONE
        murG 1480285 .. 1480302 +    -7  -5.74122   GCCGGTTAGACATAA             GGACTC GAAAAA GAGTCC              TTTTTTTATATAATC 100 32
LQRI_RS06335 1480905 .. 1480918 +  -5.3  -3.71487   GACTTGTATAAATAT               GAACA AGTA TGTTC                TTGTTAAATGTAATA  59 80
LQRI_RS06340 1481875 .. 1481900 +  -7.7  -5.14563   GCGCTTCAAGGTTTG         CGAGATTTTCG AGGA TGAAAATTTCG          TTTTTTAGTAGCAGC  88 201
LQRI_RS06360 1486696 .. 1486714 +  -3.8  -4.67234   GCCGGAGGTAAAGGG             GTGCTTGT TAG ATAAGCTC             TTTTTGAAGTTGGCT  65 494
LQRI_RS06375 1488384 .. 1488402 + -11.7  -3.08133   CAGAAAATATTTTAA             GCGGGGA ATAAA TCCCCGC             TTAACTAAATCAATG  89 75
LQRI_RS06400 1494227 .. 1494249 + -16.4  -4.70534   TTTGGTGTCGAAACT           GCTCCGGAAA TGT TTTCCGGAGC           TTTTATGTGTCTTTC 100 86
        queA 1495391 .. 1495401 +  -3.2     -3.54   CAGATTTTTCAGCTT                 TGGT GAC GCCA                 TGTTTATAAAATGAT  48 1
         tgt NONE
        yajC 1497091 .. 1497102 +    -3   -3.8062   TTTTCAAAACAATAG                TTCA TTCC TGAA                 TTGTTGTCCCAGTTG  53 111
LQRI_RS06425 1498443 .. 1498466 + -11.8  -5.06103   GTATGCTGCAAAGTA          GCTTCTTGCC GACT GGTAAGAAGC           TTTTTTAGAGCTTGT 100 244
        pyrR 1499264 .. 1499290 +  -6.1  -5.40474   GTGATTTTTGAAAAA        TAGTAAGGAATA CCAT TA-TCCTTACTA         TTTTTTTGAGGCCAT  88 212
LQRI_RS06440 NONE
LQRI_RS06445 1501652 .. 1501662 +  -2.6   -4.2361   ATCAGTAATGTTTTG                 TATT AAC AATA                 TTTTCAAATTGTGTT  55 112
        pyrF 1502634 .. 1502645 +  -4.4  -3.08046   GTGCGTTGCGAGACA                GGAA GTAA TTCC                 ATTTTAGAATACGAG  50 18
LQRI_RS06455 1503797 .. 1503808 +    -3  -3.02023   TTATTCGGAAGATAA                TTCT TGTA AGAA                 GTTTAATTATATAAG  45 78
        carB NONE
LQRI_RS06465 NONE
LQRI_RS06470 1508786 .. 1508800 +  -2.2  -3.33696   GCTCAACTGATAAAA               TGATAT AAT ATATTA               TGTTGATTATATGTT  44 31
LQRI_RS06475 NONE
LQRI_RS06480 NONE
LQRI_RS06485 NONE
LQRI_RS06490 1512368 .. 1512384 +  -5.9  -3.71649   TTTTTTTATTTTTTA              GAGAATC AAA GATTTTC              TTTAAACTTTAAGCG  62 56
        rimO NONE
        pgsA 1514459 .. 1514483 +  -9.3  -5.68039   AAGTAAAATAAAAAA          GAGTCAGAGAA CCA TACTCTGGCTC          TTTTTTTGTGGCTTT 100 39
LQRI_RS06505 1515190 .. 1515204 +  -2.8  -2.52676   TAGTATGGGATATAC               CTTCAA GTT TTGCAG               TAGATTAAAACGGTG  40 3
LQRI_RS06510 1516137 .. 1516177 + -19.9   -3.5616   CCCGGAAAAGATTGC  CCAAACATGAGGCAGGTGT TTT ACACCTGCCTCATGTTCGA  TTATCCGTTTTTAGC 100 359
        fapR NONE
        plsX NONE
LQRI_RS06525 NONE
        fabD NONE
        fabG 1520886 .. 1520902 +  -3.6  -2.63234   TAAGAATCAAGCAAC              CCCCCT GTGGA AGGAGG              TGAATTATAATGTTC  44 87
        acpP 1521142 .. 1521158 +    -8  -5.31275   TAATTCATAAAAAAA              GTCCCT GCAAA AGGGAC              TTTTTTATGATAAAC  93 31
        fabF 1522617 .. 1522648 +    -9  -3.27704   AGCTGTGAAATATGA      TAATATATTTTTCC GTCA GGAAATATATATTA       TTGCCTTTGAAGGAT  77 121
         rnc 1523474 .. 1523484 +    -4  -3.66654   TAATTATATATACAA                 TTAG ATT CTAA                 TTTAAGATTAACATG  53 116
LQRI_RS06555 1524733 .. 1524757 +  -6.7  -4.36914   ATTTGTTTTAATTAA          TTTAATTTATA TTA TATAAGTTAAA          TTTTATGAGGAGGAA  78 138
LQRI_RS06560 1525066 .. 1525089 +   -14  -5.28755   ATTTACTGTTTTGAG          GCTGTTCTTG GTTA CAAGAACAGC           TTTTTTAATGTGTTT 100 52
        pdxA 1526228 .. 1526241 +  -2.5  -2.84636   CAACTACAAAAACAA               TATTT TGTG AAATA                TGCCTTTGTTTTACC  42 16
         smc NONE
        ftsY 1530874 .. 1530885 +    -3  -2.56571   ATTTGTTGAAGCACT                CTTT TCAT AAAG                 TAAATTAAGTATATG  42 16
LQRI_RS06580 1531615 .. 1531635 +  -3.4  -3.69332   TGAGAAAATTTTACT           GCAAACGAA AATT TTC-TTTGC            TTTGAAGTGTTATTC  52 74
LQRI_RS06585 NONE
LQRI_RS06590 1533438 .. 1533455 + -11.3  -3.89412   CCAAAGATTAAATCA             GGAAGCC GTTT GGCTTCC              TTTAATAGTTTAAGT  95 80
LQRI_RS06595 1534665 .. 1534693 + -13.3  -3.77486   TATGAATATAAAGGA        TAGACAGGGGGAT GGA ATTTCCCTGTCTA        TTATATATTATATTT 100 107
LQRI_RS06605 1537261 .. 1537275 + -11.4     -2.89   GGTGAGGACGGGGTT               TGGGGC GGA GCCCCA               TAATTCTATACAACT  86 237
LQRI_RS06620 NONE
LQRI_RS06625 1545818 .. 1545852 + -10.9  -5.03201   TAATGATTTTTTAGA     GGGGCTGTTTCAAAA TAGAT TTTTAAAATAGCCCC     TTTTTGCTTATTGTT 100 75
LQRI_RS06630 1548003 .. 1548031 +  -4.7  -4.62069   ATGGAGTAATAAAAA       GCGGGAAAAGCTT AATAA AAGCTT--CCCGC       TTTTTAAAATCCGGA  69 94
LQRI_RS06650 1556809 .. 1556824 +  -3.3  -2.78679   TCATATGGAGGATGC              CTGTT TTGGAT AACAG               ATTTGCATCGAACAA  44 328
        pgeF 1557735 .. 1557746 +    -3  -2.78384   CCCGGAAAAAGTTAA                TTCT ACAA AGAA                 TATGATCAGGGAGAG  42 107
LQRI_RS06660 1559516 .. 1559528 +  -4.9  -2.54276   GGAAGGCTGGGCTTA                TATGA TTT TCATA                GTATTAATTGCCGCT  50 105
        lspA NONE
LQRI_RS06670 1561072 .. 1561082 +    -4  -2.51871   CTATTTGTGCTATAA                 TACA ACG TGTA                 AATTTTACTATAGGG  45 88
        scfA 1561307 .. 1561338 + -11.1  -5.11937   ATTACAATTGACAAA      GTGAAAAGTGAAA CAAGTA TTTCGCTTTTCAC       TTTTTTAGCGTTATT 100 85
        scfB NONE
LQRI_RS06685 1563456 .. 1563474 +  -3.2  -3.97088   CTTTAAATTTTGTTT             TTTTGCTT CGG AGGTAAAA             TTTGGTGTTATACAA  55 35
        secD NONE
        secF 1565945 .. 1565972 +  -7.8  -5.59962   TTATTAGTAAACAAA        TTGGATGGAAGT TAAG GCTTCTGTCCAA         TTTTTATTTATTTTA 100 75
        panB NONE
        panC NONE
LQRI_RS06710 1568415 .. 1568459 + -12.4  -4.85599   ATGGGGAAATATGAA GGTTAAGAATTGGGGAATCC TTTTT GGATTGTTCAGTTCTTAACC TTTTTCTGCAATAAA 100 27
LQRI_RS06720 1570155 .. 1570168 +  -2.5  -3.61894   ATCATTTATTGGCAA               TATAT ATTT ATATA                TTATTAAGAAAAGTT  48 40
LQRI_RS06725 1571375 .. 1571392 +  -2.1  -3.53012   AGTAGAAAGAATATC             TAAAAAT ATTT GTTTTTA              TTTAAAGAAGGAAAA  46 118
        dnaG NONE
        rpoD 1574576 .. 1574599 +  -7.4    -4.564   TTGGATTGATTTTAA          GAGCCGGG ATTTGCTG CCTGGCTC           TTTTAGTTTGGCGTT  80 32
LQRI_RS06740 1575191 .. 1575225 +  -4.5  -2.51133   GCATAAGTATAATAT    ATTTTGTGTTTAGCAA ATAG TTGCT-GACACAAAAC     GTTCCTCAATAGCTC  48 142
LQRI_RS06745 NONE
LQRI_RS06750 1575391 .. 1575424 + -12.1  -5.71712   GCCCACCATAGGGAA     TAAAATCAGGAAGTAT GAA ATACT-CCTGATTTTA     TTTTTTTGTCTCCAA 100 33
LQRI_RS06755 NONE
LQRI_RS06760 NONE
        rnpB 1577977 .. 1577997 +    -9  -4.88407   GTAAATTATCAAAAA            CACCAGCT TACAT GGCTGGTG            TTTTTGCTTGCGTAA  93 42
LQRI_RS06775 NONE
LQRI_RS06780 NONE
LQRI_RS06785 1581224 .. 1581247 +    -8  -5.37043   ATTATAAAAAATTAA          GGGACAGCTG TTTA CTGCGGTCCC           TTTTTTGTGTACAAT 100 89
LQRI_RS06790 NONE
        polA NONE
        coaE NONE
LQRI_RS06805 1585789 .. 1585814 +  -6.1  -3.72241   AAGCACGCTTTGAAT         TGCCGTCGGTT CTAA AGCGGATGGCA          TTTGAATGCTTGATG  64 165
LQRI_RS06815 NONE
LQRI_RS06820 1588617 .. 1588649 +  -7.8  -5.52347   AAAGACAATAAATTA      GCTCGAAAGACA TCTAACTTT TGTCTTACGAGC      TTTTTTGATTTTGTT 100 91
LQRI_RS06830 1591347 .. 1591396 + -11.7  -3.57263   TTACTACAATTTTGA CAGAAAAAAAGCGCATGC-ATTTG TTA CAGTTTGTATGCGCTTTTATTCTG TTTGAGAATGAAGAT  95 50
        trpE NONE
LQRI_RS06850 1596557 .. 1596579 +  -6.4  -4.17316   GCGATTTGAGTCGCA           GTACTTAAAA GTT TTTTAAGCAC           TTGTTTTAAAAGAAT  70 32
        trpD NONE
        trpC NONE
LQRI_RS06865 NONE
LQRI_RS06870 1599924 .. 1599941 + -10.5  -5.06414   AAGACTATAATGATG             TCGGGGG AATA CCCCCGG              TTTTTATTGAAACAG 100 97
LQRI_RS06875 NONE
LQRI_RS06880 NONE
LQRI_RS06885 NONE
LQRI_RS06890 1602848 .. 1602864 +  -2.3  -4.56597   AAAGTTTTAAAGCTT              TAAAAGC GAG GATTTTA              TTTTTGGAAGGGGAA  59 39
LQRI_RS06895 NONE
LQRI_RS06900 1604287 .. 1604311 +  -7.8  -5.73672   TGAAATCATTGATAA          AGCCCTCCTT ATTGA GAGGAGGGCC          TTTTTTTGATTGTTT 100 135
LQRI_RS06945 1613712 .. 1613722 +  -2.6  -2.59683   AAACCCGAAAACAAA                 TTTA AAA TAAA                 ATTGTAAAATAAACT  40 21
LQRI_RS06950 NONE
LQRI_RS06955 NONE
LQRI_RS06960 1617347 .. 1617362 +  -2.6  -2.91264   TATTGGAATGGTACC              TG-AGCA CTT TGCTTCA              TGTATGAGTGAGAAA  42 3
LQRI_RS06965 1617884 .. 1617918 + -12.5  -5.28778   CATTAGTTATAATAA     TATTATGCTTTAATC TTTAC GATTGAAGCATAATA     TTTTTTATGGGTGAT 100 93
LQRI_RS06970 NONE
        aroQ 1619237 .. 1619261 +  -7.9  -4.42062   ATGACATATTATTAA          CATGACATGTT GTT GACATGACATG          TTTATTTAAAAACTG  82 37
LQRI_RS06980 1620570 .. 1620583 +  -2.5  -5.01732   GGCCTGTAACTTATG               TATTT TAAG AAATA                TTTTTTGGAGGGATT  66 208
         efp 1621156 .. 1621168 +  -3.5  -2.57581   AGTATATGGAAAGAG                TATAA CGG TTATA                ATATATTTGGGTTGG  44 21
LQRI_RS06990 1621734 .. 1621768 + -16.7  -5.95539   TATTTAAGATATAAA     GAATGGACGTGGAAA GTGTA TTTCCATGTCCATTC     TTTTTTTGTTTAAAG 100 57
        tnpA 1622481 .. 1622499 +   -16  -3.51597   TAGGGCTAGAGCAAA             CCACCGGC TGA GCCGGTGG             TTATGATTGACCGTT 100 126
    spoIIIAA NONE
    spoIIIAB NONE
    spoIIIAC NONE
    spoIIIAD NONE
    spoIIIAE NONE
    spoIIIAF NONE
    spoIIIAG 1627526 .. 1627536 +  -2.6  -3.72576   TAAAATGTTTGGAAA                 TATA ATA TATA                 TTTACTGAAAAACAG  48 69
LQRI_RS07035 1628261 .. 1628280 +  -2.2  -2.72568   TCACAAAGTTGATAA            TATAATGC CGTG GTGTTATA             ATATTTGATGTTGGC  40 50
LQRI_RS07040 1628826 .. 1628858 +  -6.5  -2.85354   GGGTTTATTTTTTTG      GCAAAATGAAATATA ATG TATATATAATTTTGC      ATTTGGATTAGCATA  58 110
        amaP NONE
LQRI_RS07050 NONE
        nusB NONE
        xseA NONE
LQRI_RS07065 NONE
LQRI_RS07070 1632665 .. 1632675 +    -4   -2.6193   CTGGAAAGGGAAAAT                 TGAT TCT ATCA                 TCAGTTAATTGGTTG  46 23
LQRI_RS07075 1633238 .. 1633248 +    -4    -3.671   GGAGTATTTTTTACA                 GAAT GTC ATTC                 TTTAAACGTTTCTTT  53 112
LQRI_RS07080 1634782 .. 1634798 +  -5.1  -3.07522   GTTTGAAAGAGAGAT              GATACCA GGG TGGAATC              TGTATTGGACAGTAT  52 35
         dxs NONE
LQRI_RS07090 NONE
LQRI_RS07095 1638569 .. 1638580 +  -4.4  -3.21853   ATTCACTTAAGCAAT                TGGA TTTA TCCA                 TATAATTTATTTTTT  52 195
LQRI_RS07100 1640852 .. 1640882 + -13.3  -4.91712   GTTTAATCGGTAAAA       GAGCCCTGTGGCA AAAAC TGCCGCAGGGCTG       TTTTTATCAATTCCG 100 77
LQRI_RS07110 1645313 .. 1645343 +  -4.8  -3.24747   TTATTAGTCAATCTA       TCATCTTATATCAG CTG CTGGTATAAGAAAA       TTAATGCTATAAAAA  54 420
LQRI_RS07115 1645798 .. 1645840 + -14.2  -3.33162   AACTATACATAATGA TTTGGCATAAGACCTGGACC AAT GGTCTGGGTCTTATGCCTGC TTGTGAGGTGCAATA 100 40
LQRI_RS07120 NONE
LQRI_RS07125 NONE
LQRI_RS07130 1649828 .. 1649846 + -12.4  -3.51329   TAGGGTTAGAGCAAA             CCACCGGC TGA GTCGGTGG             TTATAATTCAGCCTC  91 423
LQRI_RS07140 NONE
LQRI_RS07145 NONE
        recN 1658856 .. 1658880 +  -2.8  -5.92399   TTCTATAGATAAAAA          GCTTGGGA GAATCACAA TCCCGGGC          TTTTTTATTTTGTTG  82 45
      spoIVB 1660474 .. 1660504 +  -8.5  -4.21275   GTAAGATTATAAAAA       TATGTGTATTTTC GTAAG GAGGATACACATA       TTTTACATAAATTGC  87 81
       spo0A 1661635 .. 1661685 + -18.8  -4.25401   ACAGTAATAAGGTGT GGAAGCAGTAATAAATTTTAAGTT ATA AGCTTAGAATTTATTACTGCTTCA TTTATGTTGGCTTTA 100 69
LQRI_RS07165 NONE
LQRI_RS07170 NONE
LQRI_RS07175 NONE
LQRI_RS07180 NONE
LQRI_RS07185 NONE
LQRI_RS07190 NONE
LQRI_RS07195 1670582 .. 1670597 +  -7.6  -5.97575   GGCTCCGTTATTACA              TTCTCC GATT GGAGAA               TTTTTTTTATGGCTT 100 415
LQRI_RS07210 NONE
LQRI_RS16045 1672849 .. 1672868 +    -5  -5.29846   AATTTTAAAAAAGAA            CACAGG ATTTTTTG CCTGTG             TTTTTATTTGAGATT  79 41
LQRI_RS07215 1674183 .. 1674222 + -10.8  -2.98387   CGTATATAGTATAAT  CA-AGGGGTTCAGGGAAAC TCT GGTTTCCTGAACCCCCCTG  TAATATTTTATACGC  83 32
LQRI_RS07230 1678206 .. 1678261 + -18.8  -3.53444   TTAAAGTTTTTAATA AAC-GGATATATAAAAGAAGCTCCAAA TTC TTTGGAGCTTCTTTTATATATCCCGGG TTTCCAACAAAGTGC 100 59
LQRI_RS07235 1680983 .. 1681008 +  -8.9  -4.82901   AGGATTTTAAAAAGA         CGGCCTCTGCC TGAT GGCAGGGGTCA          TTTTTATGCCGGCAC  93 42
LQRI_RS07245 NONE
LQRI_RS07250 NONE
LQRI_RS07255 NONE
LQRI_RS07260 NONE
LQRI_RS07265 NONE
LQRI_RS07270 NONE
LQRI_RS07275 NONE
LQRI_RS07280 1688861 .. 1688885 + -12.2  -5.80951   TACCGCGTGAGAATA          CTCTCGTCCC TTTTT GGGATGAGAG          TTTTTTGTTTTGGCT 100 329
        ileS 1691773 .. 1691789 +  -3.7  -4.15565   GCGGTTGATTTTACA              GGCTAAA AGG TTTATCC              TTTTAGCCTGATACA  58 45
        aroB 1692897 .. 1692928 +  -9.5   -5.4588   ATAAAGAGGGTAATA      GCCAGCCTT-GGTG AATGA CAGCGAAGGCTGGC      TTTTTTGTACTTTTG 100 8
LQRI_RS07300 NONE
        miaB 1696415 .. 1696426 +  -4.4  -2.58731   ACAAACAGGAAAATT                CCAT GGGT ATGG                 CTATTAATTCTGTCA  48 185
LQRI_RS07310 1697866 .. 1697908 +  -9.4  -3.02518   TGCTTTTTTTAAAAA CTGAAAAGTCATAGTTTGTT TAA AGAAAGCTATGACTTTTCAC CTGTTTTTGCTTAAA  76 74
LQRI_RS07315 NONE
LQRI_RS07320 1700782 .. 1700792 +  -2.6  -2.73159   AAAAATTTTTAATAA                 TTTT ATA AAAA                 ATTTAAAAAAATTAA  40 44
LQRI_RS07325 1701542 .. 1701563 +    -6  -2.58243   AAAGAAGCGGCAAAA           TATACGAT ATTATA ATCGTATA            GTATATTATTATAAG  54 58
LQRI_RS07330 1702959 .. 1702969 +    -4  -3.92369   AGATTTAATAAATTT                 TTCT ACT AGAA                 TGTTATTTTTTCGAT  56 17
LQRI_RS07335 NONE
        mutS NONE
        mutL NONE
        miaA 1709478 .. 1709488 +  -2.6  -3.86897   ATTTGTTAATAAAAT                 TTTA AGG TAAA                 TTTGTACGCAATAAA  51 60
         hfq 1709834 .. 1709874 +  -4.9  -4.22041   AAATGATAATAAATA GGCAAAAGCT-CC-AAAGC ATTGC GCTTAAGGGAGCTTTTGTC TTTATATTGAACTTT  64 61
LQRI_RS07365 1711155 .. 1711180 +    -7  -5.79595   GGATATTGCTTTAAA         GTACTCTTTT CAATGA AAAAGGGTAC          TTTTTTCTTTTACAG 100 125
LQRI_RS07370 1711668 .. 1711679 +    -3   -3.9243   GGAATTGAGGTGTCA                CATA GTAT TATG                 TTGTTTGAAGGATTG  52 58
         ffh NONE
        rpsP NONE
LQRI_RS07385 1713612 .. 1713640 +  -9.6   -5.2166   ATTACAGTAAAAAAA        TGTGGGCAGGGG TCAGT CTCTTGTCCACA        TTTTTTAGCTTGTTG 100 31
        rimM NONE
        trmD 1715077 .. 1715087 +  -6.8   -2.8733   TCATCCTGTGGAATA                 CGGA CGG TCCG                 CTGTTTTATACAAGA  61 125
        rplS 1715485 .. 1715510 + -14.9  -3.60792   TAAAATAGTTAAAAA         TAAAGGGGACT TGCA AGTCCCCTTTA          TTTCGCAATTCAAAA 100 38
        lepB NONE
        ylqF NONE
LQRI_RS07415 NONE
LQRI_RS07420 1718720 .. 1718730 +  -2.6  -2.90496   TAGTATAGGCCAGGC                 TTTT CAC AAAA                 TGCTTTAGGAGGAAG  42 33
LQRI_RS07425 1720367 .. 1720378 +    -3  -2.93853   ACAAGAAACAGAGGG                TTTG ACTG CAAA                 ATTTGATTGACGGGG  43 8
LQRI_RS07430 NONE
LQRI_RS07435 NONE
        radC 1721910 .. 1721920 +    -4  -3.53091   CTTTCCGGTTGATAT                 GAAA AAT TTTC                 TTTAAACCGGGGCAT  51 29
LQRI_RS07445 1723091 .. 1723138 +  -2.2  -4.20749   GATGATCTTCACGCC GGCCTGTATAAATTTCTA AACTCTAAATCA AAGGAATTTATACAGACC TTTGTTCGACTATTA  54 101
LQRI_RS07450 1724950 .. 1724972 + -16.4  -4.74706   GGCACGTTACATAGA           GCGGGATTCT TTC AGAATCCCGC           TTTTTGCGTATTGAA 100 48
LQRI_RS07455 NONE
LQRI_RS07460 1727088 .. 1727107 +  -4.4  -3.35237   AATAATCTTTACAAA            TTGGAAAA ATAG TTTTTCAA             TTCAGTTATTGTTTG  52 14
LQRI_RS07465 1727679 .. 1727695 +  -8.1  -4.58773   TAATAAAATCTAGAT              GTTTACT ATA AGTAAAC              TTTTGGTTTAGTAAA  85 287
LQRI_RS07470 NONE
LQRI_RS07475 NONE
LQRI_RS07480 NONE
LQRI_RS07485 NONE
LQRI_RS07490 1732143 .. 1732194 + -12.7  -3.24926   TTTTTAGTGGAAAGT CACGATATGCTTTCTGTTTTAC CGGGGGAAA GTAGA-CGGAAAGCATATCGTG CTTGTTTTTAAAATA 100 129
LQRI_RS07495 1733041 .. 1733063 +  -9.1  -5.73978   AACGTAAATAAAAAA           CCCAGGGAC TTTTT GTCCCTGAG           TTTTTTATTTGTGGT 100 50
LQRI_RS07505 1738566 .. 1738577 +    -3  -2.79492   GTGAAAAAAAGTTGG                TGAT GGAT ATCA                 ATTTGCGATTCGGAG  43 69
LQRI_RS07510 1740214 .. 1740234 +  -2.5  -3.75738   TGGGCTCCCATATTA            TCTGTCGGT TAA ACGGAGAGA            TTCTTACTGATGATG  48 104
LQRI_RS07515 NONE
        purB 1742429 .. 1742441 +  -3.5  -3.12471   TGGGTTGCCGAGTCT                TTTTT TAT AAAAA                TATGTTGAAATTTAT  46 81
LQRI_RS07525 1743432 .. 1743442 +  -2.4  -3.79687   GAACCTTCAATATTT                 CCGC CAA GAGG                 TATTTTGTCAAGGAT  51 128
        copZ 1745513 .. 1745527 +  -8.5  -4.07647   TAAAATAAAAGCTTA               GGGGC GAAAA GCCCC               TTTGCTTTCAGCTAT  82 57
LQRI_RS07540 1747182 .. 1747192 +  -6.8  -3.69684   TAACATACATCTCTT                 CGCA GGA TGCG                 TTCTTCCATACGTTT  67 438
LQRI_RS07545 1751515 .. 1751541 + -10.8  -5.09521   CAATCAAGTAAAATG         CTGCAGGTGGCG AAA TGCCGCCTGCAC         TTTTTCATTTATTAA 100 52
LQRI_RS07550 1752545 .. 1752563 +  -4.6  -3.91947   TAATATAATATAGAA             GGAAGAAA AAA TTTATTCC             TTAGTTTTTCGTTTT  58 96
LQRI_RS07555 1753896 .. 1753915 +  -6.6  -2.71011   AAATACAGACAATTA            TACAAAAT AAAA ATTTTGTA             TAATTGGAGGGAGGT  59 204
LQRI_RS07560 1755069 .. 1755080 +  -2.2  -5.72207   ACAAGCTATTATCAT                GCTT TTTG AGGC                 TTTTTTTGATTTCAA  78 73
LQRI_RS07585 NONE
LQRI_RS07590 1761887 .. 1761945 + -14.3  -5.35815   AGGTATAAGTAAAAT AAATGACTCACAACATAAAC-CTTTCAA AAGT TTGAGAGAGTTTGCGTTGTGAGTCATTA TTTTTATTTGATATA 100 29
LQRI_RS07605 1766382 .. 1766407 +  -9.1  -4.42325   TAAACATTAAAAGAA         GCTTAGAGG CATGCAAA CCTCTAAGC          TTGTTTTCTATGTCT  89 173
LQRI_RS07700 1783567 .. 1783581 +  -5.8  -4.20883   CTTCAAACATAATAC               CAAAAA TAA TTTTTG               TTTTCAAGGTTTTTA  69 383
LQRI_RS07735 1789216 .. 1789240 +   -13  -3.46904   TTGCATCAAAAGCAA          TTTAAGGGGC AACAA GCCCCTTAAA          TATTTGCCTGTATTT 100 21
LQRI_RS07805 1803451 .. 1803466 +  -4.7  -5.45802   GATAATACATAAAGA              TCTCC TTTTAT GGAGA               TTTTTATTTTGCAAA  82 195
LQRI_RS07860 1814391 .. 1814412 + -11.7  -5.58074   TGCCCCTGCCACAAA           CCTGTTTCA GAAA TGAAACAGG            TTTTTTTAATGCTTC 100 30
LQRI_RS07865 1815326 .. 1815363 +  -9.2  -6.01369   GGTTTTTTAAAATAA   GCAACAACGCTCCTTG CTGATT TAAGGAGAGTTGCTGC    TTTTTTTATTGTTTA 100 6
LQRI_RS07905 1824089 .. 1824120 +  -8.1   -5.1485   TCCGACCACTAAAAA      CAGCGTCTTAC ATAGATTGCA GTAAGGCGCTG       TTTTTATATTCCTTA  93 33
LQRI_RS07910 1824922 .. 1824951 +    -5   -5.9667   ATCTTGCTAATATGA       AAAATCCCCAGG ATTGGA CCTGAGGATTTA        TTTTTTTATATTTTT  93 97
LQRI_RS07930 1830455 .. 1830468 +  -3.1  -4.02051   TAAAAAAGTGGTGTA               TCTGT CCGT GCAGA                TTGTTTAGCTTAATA  56 241
LQRI_RS07940 1831658 .. 1831696 +  -8.4  -2.53953   TTGGAAATCAAAGTA   TATACCCGGTATTG GAAAACTTGGA TAATACCGGGTATA   ATATATGTTTAATTT  67 65
LQRI_RS07990 1839785 .. 1839816 +  -7.5  -4.22524   CCAAAGGAATAATAC      GACGGTTCTTTGTT TTAAC AACAAA-AGCCGTC      TTTAATTTTGACTAT  80 38
        gltX 1841628 .. 1841660 + -11.5  -3.59315   CAAGATTATATATTA      TAAAAGCGATGGA GATTTCA TCCATCGCTTTTG      TTTAACAGTAATTGA  93 146
LQRI_RS08025 NONE
LQRI_RS08030 1849982 .. 1850005 +  -8.2  -4.67755   ACTCCAACACGAAAA          CGGCTTCA TTTAATCT TGAAGCCG           TTTTTGCATAAATAT  85 74
LQRI_RS08045 1853824 .. 1853842 +  -3.2  -4.22377   AATTTCTTCATAAAT             CTGTTAAT TAT ATTAAAAG             TATTTTTATTGTGAG  57 188
        essC NONE
LQRI_RS08055 1859090 .. 1859110 +  -9.1  -5.44119   TTAAATTATAAAAAG            GCTATGTAA AAA TTGCATAGC            TTTTTTTAAAGTGAG 100 130
LQRI_RS08060 1859397 .. 1859410 +  -2.3  -3.12327   ATAATTGTCATAAAT               CCGCA ATCC TGCTG                TATTCAATATCACAA  42 37
LQRI_RS08065 1860375 .. 1860388 +  -2.5   -3.2655   TATCATAATTACAAT               TTATA ATAT TATAA                TTACATCTTTCATTG  44 49
LQRI_RS08070 1862658 .. 1862670 +  -2.7  -4.74598   ATTATCCCCTACAAA                TTGCT TTA AGTAA                TTTCTTTTAAATTTA  65 122
LQRI_RS08135 NONE
        mtnA 1881831 .. 1881867 +  -2.4  -5.52807   CTTCCGCAAAAATTT    AAAAGCCTCAAATT CAATGTCAA AATTTGAGGCTCTG    TTTTTCTTTATTATT  75 46
LQRI_RS08150 NONE
        feoB NONE
LQRI_RS15645 1885594 .. 1885607 +  -4.5  -4.70511   ATTTCTAAGGTGCAT               CGGGA CTTC TCCTG                TTCTTTTGTTTTTCA  72 398
LQRI_RS08275 1912243 .. 1912293 + -10.1  -3.10098   GACAGTTAGAAAATT TAAAGTCTGAAGGCAGAAAGACCAA TTT TTCGTCATT--GCCTTCAGACTTTA TAATTTTAGGCTCGT  81 76
LQRI_RS08305 1917395 .. 1917409 +  -4.2  -2.94099   CAAACCCCGTCCTCA               CCGG AAGGCAG CCGG               TCTGTCATAACAGAC  47 59
LQRI_RS08365 1933158 .. 1933171 +  -4.5  -3.21466   ATATCGTTCTAGTTC               CTCCA ATAT TGGGG                TTAGATTCGTACGTT  51 313
LQRI_RS08385 NONE
LQRI_RS08390 1941663 .. 1941688 +  -4.9  -5.29846   TTTTACTTTAAATTT         TTTCTTTAAAT TTTT ATTTTAAGAAA          TTTTTATTTCAAATT  79 189
LQRI_RS08395 NONE
LQRI_RS08400 1944741 .. 1944767 + -11.6  -4.57514   ATAAAGACTTAAAAA         GGCTTCCGGC AGCATTA GCCGGAAGTC         TTTGTCTTTTCTTAT 100 37
LQRI_RS08410 1948165 .. 1948187 + -11.4  -5.47399   AAGATAATCAAAAAA           GAGAAGAGTT CAA AGCTCTTCTC           TTTTTTTACAGTTCA 100 109
LQRI_RS08500 1967450 .. 1967475 + -10.5  -5.53288   AACGGCATCATAAAA         GGTGATCTGCA AAAC TTCAGATCACC          TTTTTTTACGTTACC 100 55
        asnB 1972308 .. 1972334 +  -9.4  -4.77036   GCAAACAACTAAAAA         TCCTGGCAGC CTAATCC GCCGCCAGGA         TTTTTAATCATACAG 100 44
LQRI_RS08535 NONE
LQRI_RS08540 NONE
LQRI_RS08545 1981092 .. 1981123 +  -8.1  -4.87273   AAATGTTTATAAAAA      TGTCCTTCGAAAG CTTTAT TTTCCGAAGGACA       TTTTTATAAAATCTT  90 68
LQRI_RS08685 2011014 .. 2011048 +   -16  -5.16206   CGCACCAAACAAAAA     GAAAAGCCTTGAAGTT TTA AGTTTCAAGGCTTTTC     TTTTTGTCTTCCTTT 100 34
LQRI_RS08695 2013894 .. 2013917 +  -2.4  -3.28472   GATCCTTGCACTGGT          TCCACTATTT ATGT AAAAAGGGGA           TGATTTTTAATGAAA  44 10
LQRI_RS08700 2014143 .. 2014172 +  -8.9  -5.77677   AGTTTAAATAAAAAA       CTATTACAACAATT TTT AATTGT-GTAATAG       TTTTTTATTGTTTTC 100 80
LQRI_RS08710 2015518 .. 2015542 +  -4.5  -3.64822   ATAGAAAAAAGCAAA          TAATAAAAG AAAAAAG CTTTTATTA          TTTGCCTGACAGAAT  56 23
LQRI_RS08965 2064969 .. 2064982 +  -3.8   -4.4078   CATTCCAACCACCGG               CGGT TATTGC ACCG                TTTTCATTGGCGGGA  64 186
LQRI_RS09035 NONE
LQRI_RS09040 2079648 .. 2079676 + -10.4  -5.34632   TTAAAAGAATAATGG        GGTGACCTTG GCAGAGTAA CAAGGTCACC        TTTTTATCTTTTCTT 100 21
LQRI_RS09085 2092599 .. 2092640 + -23.3  -3.63991   TTAATATTTCTTTTT CCAAACTAAAAGGGCAGCT AAAA AGCCGCCCTTTTAGTTTGG  TTATTAAAAATACTC 100 94
LQRI_RS09165 NONE
LQRI_RS09170 NONE
LQRI_RS09175 2111718 .. 2111731 +  -5.2   -2.7185   TAATTTTAAAAAGGA               CCGG CAAAAA CCGG                TCCTTCACAAATAAT  52 93
LQRI_RS09190 2120638 .. 2120661 +  -3.9   -5.2197   AAAAGCAAAAGAAAA          GTCTGATAT GGGGCA AAATCAGAC           TTTTTGCTTTTTGTA  74 39
LQRI_RS09210 NONE
LQRI_RS09215 2127903 .. 2127917 +   -10  -2.88054   ATAGTATACAAGTCC               TCCGGT ATC ACCGGA               ATTTGCATTATAGCA  73 471
LQRI_RS09245 NONE
LQRI_RS09250 2139010 .. 2139024 +  -4.2  -2.97475   GCAAAACAAAAGCCC               TGCGAA AAC TGCGCA               ATTTATCATCAGGCA  47 97
LQRI_RS09375 NONE
        gltA NONE
LQRI_RS09385 2167757 .. 2167796 + -10.8  -2.98387   CGTATATAGTATAAT  CA-AGGGGTTCAGGGAAAC TCT GGTTTCCTGAACCCCCCTG  TAATATTTTATACGC  83 32
LQRI_RS09410 2175104 .. 2175127 +   -11  -4.51097   GAGCCAAATTCAAAA          GTCTGCAGCT TTAA AGCCGCAGAC           TTTTGTCATAATTAA 100 50
LQRI_RS09425 2177894 .. 2177918 + -10.2   -5.7946   GAATTTCTGTTTTTT          TGTACTATGT TTTAT ACATAGTACA          TTTTTTTATTCAAAA 100 169
LQRI_RS09470 2185889 .. 2185899 +  -2.6  -4.03413   TAAATTATTCTGTCT                 TTTT ATA AAAA                 TTTCTATAAAAAAAT  53 259
        glgP 2188740 .. 2188772 + -15.8  -3.49182   ATAAAATATTACAGG     GGGGTTCA-GGAAAC CAGA GTTTCCCTGAACCCC      TTGATTATACTATAT 100 219
LQRI_RS09520 2199304 .. 2199331 + -14.2  -4.53777   GAAACTGCCAATACC        GACCGTCTGGGT GAGA ACTCAGGCGGTC         TTGTTTTTCCTTACA 100 79
LQRI_RS09530 2201172 .. 2201182 +    -4  -3.83066   ATAATTGTGCATTAA                 TATC GCA GATA                 TTTAATAATATAATT  56 37
LQRI_RS09535 2202422 .. 2202452 +  -9.8  -5.69793   TACTAAAATAAAAAA       GACAGGCAAAGG TTTTACT CCTTTACCTGTC       TTTTTTATTTAATCT 100 62
LQRI_RS09620 2218893 .. 2218921 + -11.7  -5.19261   TCTTCTTATTAAAAA        TGAGGGACGACTG TTA CAACCGTCCCTCA        TTTTTTCATAAGTTT 100 72
LQRI_RS09650 2223443 .. 2223465 +  -9.9  -4.72497   GTAAATAATATAAAG           TAAGAGGGC GTGAA GCCCTCTTG           TTTTATTCCTGCATG  93 67
LQRI_RS09670 2230503 .. 2230531 +  -4.7  -2.93367   GCGGGGAGATATATT        TTTATTGTATTTC TCG GCAGTACGATAAA        TGTCTGCCATTCTTC  49 238
LQRI_RS09690 2234524 .. 2234535 +    -3  -3.76004   TCAGGAAAAACCTTT                TCAA CAGG TTGA                 CTTTTTTACTTCAGT  50 64
LQRI_RS09695 2235356 .. 2235382 + -10.8   -4.1822   ATAAAAGTCAAAAAA         GGACGGTTACCG TAA CAGTATCCGTCC         TTTATTAACGTCAAA 100 83
LQRI_RS09725 2244425 .. 2244437 +  -3.5  -3.15663   AGAGTTAGTATTTGG                TTAAA AAA TTTAA                TTCCTCAAACTCAGT  46 22
LQRI_RS09735 2249487 .. 2249501 +  -2.8  -4.18762   GTCCGTAATGGTATC               GGCATA CAT TATGAC               TTTTCCCTCAACATT  57 378
LQRI_RS09765 NONE
LQRI_RS09770 2257560 .. 2257570 +  -3.2  -4.36993   TAATTACTTTAAGAT                 GGAT TCG GTCC                 TCTTTTTTTCAACTT  60 78
        safA 2259597 .. 2259628 + -10.3  -5.11937   ACACCAAATACAAAA      GCTGTGAAAAGAA ACCTGA TTCCTTTCACAGC       TTTTTTGCAATTCTT 100 56
LQRI_RS09805 2266776 .. 2266815 + -10.7  -3.47349   TAAAAATCTGAAATA  CACCCACCTGCAGCCGGC TCAAT GCCTATTGC-GGTGGGTG  TTATCAATTTAACGG  85 38
LQRI_RS09835 2270701 .. 2270722 +  -2.4  -4.24786   ACGGATAAAGCGCAA           TATTGTTT TTGGTT AAACAGTA            TTTGTGTCTTATAAA  56 307
LQRI_RS09845 2272560 .. 2272570 +    -4  -4.14454   TTCAATTCCATTTCA                 TTTC TCC GAAA                 TTAGTTTTTTTATTT  58 334
LQRI_RS09850 2275004 .. 2275026 + -10.6  -4.27886   TTACCACTTCTTGAA           GTATCCCTCG CCC CAAGGGATAC           TTTCTCTATTTACAG  95 251
LQRI_RS09890 2289211 .. 2289241 + -17.1  -5.42164   CCTTGAACATAATTT       CAGGGCTATTGAA AAAAC TTCAATAGCCCTG       TTTTTATTGTTTGTC 100 142
LQRI_RS09930 2299763 .. 2299787 +  -7.2  -4.81851   AAAAGCCACAAAAAA          CAGCCTCT AAACACAAA AGAGGCTG          TTTTTCGGTTTAACT  86 56
LQRI_RS09935 2301711 .. 2301727 +  -4.5  -3.60818   CATTATACAGGAGTG              TTATGCA ATA TGTATAA              TTTAAAAGGTTTTCG  56 158
LQRI_RS09940 2302912 .. 2302932 + -12.6  -3.63627   TTTTTCTGTTTCAAA            TGTGGGGG CAAAT CCCCCACA            TTTGAAATATAAAGC  95 63
        sigI NONE
LQRI_RS09965 2310553 .. 2310589 +  -8.2  -3.93868   AAATAAAAACAAACA   GGAGCTGC-C-CGTTAAT TTG ATTAACCAGAGCAGCTCC   TATTTATTTTACGCC  77 41
LQRI_RS10060 2336477 .. 2336489 +  -3.5  -3.15663   AGAGTTAGTATTTGG                TTAAA AAA TTTAA                TTCCTCAAACTCAGT  46 22
LQRI_RS10075 NONE
LQRI_RS10080 2343946 .. 2343970 +  -5.7  -5.20633   TTTTCATAAAGAAAA          CAGGTACCTTT TTG ACAAGTACCTG          TTTTTATCTGTTTTT  83 42
LQRI_RS10090 2346502 .. 2346532 + -12.7  -3.64103   CATATAAATACAGAA       CAAGTCAGGAAGA ACCTC TCTTCCTGACCTG       TTTCAACTATCCCTC 100 34
LQRI_RS15675 2352195 .. 2352211 +  -3.7  -3.03701   TATCATCTCGAGCTC              TTCCTTT GTA AGAGGAG              TATCATTTGATGCCA  47 308
LQRI_RS10230 2378455 .. 2378494 + -12.4  -3.00946   CCCCATTTAATGAAA  TACATGCGTAGTACC-GAA TTA TACAGGTATTACGCATGTA  TAATTTCTAAACAGC  90 182
LQRI_RS10240 2379979 .. 2380018 + -12.4   -4.2528   ATTAATTTTTGCTAT  AAAAATAAGGAGTCAGAA AGCT TTCCGACTCCTTATTTTA   TTTATTCCATTGACC 100 42
LQRI_RS10250 2382040 .. 2382078 +  -4.6  -4.52897   TTCAAAAGCTTACTA   TAGCCGGAGAAAAG AATCTCCTCCC CCCTTCTCCGGCTA   TTTATTATTCATTGT  65 43
LQRI_RS10270 2388446 .. 2388491 + -19.4  -4.26188   ATACACATCATAAAA CATAATGCTAATGGGCATTC ACGTCC GAATGCCCATTAGCATTATA TTTTCACTCTATAAC 100 60
LQRI_RS10285 2391401 .. 2391414 +  -2.4  -5.15682   ATGTAAAAAAATTGT               CTGA GACAAA TCAG                TTTTCTTTGTATTTT  69 22
LQRI_RS10360 2409927 .. 2409954 + -12.8  -4.32177   CCACTCTGTATATTA        TAACCACTCTGC CATT GCAGAGTGGTCA         TTTCTTATAAAATCA 100 143
LQRI_RS10450 NONE
        argH 2431788 .. 2431809 + -10.2  -4.97461   ATTTGCAAAATAAAA           TAGTCCGG GCAATA CCGGACTA            TTTTTAATATTTCTT 100 494
LQRI_RS10485 NONE
LQRI_RS10490 NONE
LQRI_RS10495 2438126 .. 2438142 +  -5.1  -4.58283   CAAACGGCTTGCTGG              TATCCGC GTG GCTGATA              TTTTTAAAAAGATTC  69 71
LQRI_RS10500 NONE
LQRI_RS10520 2442177 .. 2442200 + -11.1  -3.39353   TAAAATTTAAAATAA          TGGGGATAG TTGACC CTATCCCCA           TTCATGTCTTAGTAT  87 463
LQRI_RS10600 2454758 .. 2454804 +  -6.6  -2.87772   AAAACTTTTTGGTAT AGTCTTTAATGAGGAGGTAAAA GCA TTTTACCTCCTCATAATCGTCA TCCTGTATTTTATAC  61 24
LQRI_RS10810 2501328 .. 2501354 +   -11  -3.31937   AAGCCAGACAAAAAA         GAAGGGTCTT GTCTTCA AAGACCCTTC         TTACGTTGTCTTTAT  85 79
        trmB 2506591 .. 2506608 +    -7  -4.87037   CTGAAAAAAAGTAAA             GAGGAC ATAAAC GTCCTC              TTTTTCATATATATT  83 27
        metF 2509939 .. 2509972 +  -5.5  -4.43576   AAAATAGTTTTAAAG     GGGTATATAC-ATATA AAC TATCTTGTATATGCCC     TTTCTTGTATATCAT  69 34
LQRI_RS10870 2512321 .. 2512347 +  -7.3  -5.11112   GAGCAAACACCGTAA        GGAC-CCGGC TTTTTTGC GCCGGAGTCC         TTTTTATTGCCATTT  88 42
LQRI_RS10925 2522543 .. 2522554 +  -4.4  -4.60924   AACAGCCTGCAACTT                TTGC CGAT GCAA                 TTTTTCCCAAGTTTC  68 211
LQRI_RS10930 2523352 .. 2523363 +  -2.2   -4.4522   AATCAGCTTTGACAG                TTCG GAAG CGGA                 TTTATTATAATTTTC  59 137
        argJ 2529627 .. 2529655 +  -9.7   -5.4833   TCAACAATTAAAAAA        CCATGTCCTTT AAAGCCC AAAGGGCATGG        TTTTTTGTTCAATAC 100 109
LQRI_RS10950 2530536 .. 2530546 +  -4.6  -4.56978   GTTTCCTCTGCATAA                 GGTC CCG GGCC                 TTTGTTGTTTACCAG  69 312
LQRI_RS10960 2531330 .. 2531357 + -10.7  -4.11304   CTACTCATGAAAAAT        TAAAGGAGAGC GATAAA GCTCTCCTTTG         TTATTTATAAGTTCC  91 48
LQRI_RS10995 2538244 .. 2538282 +  -4.6   -5.0666   TGCAATAAAACACAA   GGGACGGTTTTTATAA AAGTGCA TCACAAAAACCGCCCC   TTTCTTTTTTACATC  73 154
LQRI_RS11010 2541701 .. 2541738 + -18.1  -3.48276   AAGATATCCATACTT   TAAATGGATTGTCTCAT TAGA GTGAGACAATCCATTTA    TTATGTCAAACCACG 100 54
LQRI_RS11030 2544884 .. 2544909 +  -2.8  -4.07568   TATTTACTAATGACA         TATTTATTAA TACCAC TTGATAAATA          TTTTAAACACAACAA  53 419
LQRI_RS11040 2547017 .. 2547034 +  -9.9  -4.80882   ATGCATATTAAAAAA             GAGGCTT TGTA AAGCCTC              TTTTTAATATAACAT 100 40
LQRI_RS11045 2547837 .. 2547847 +  -8.2  -2.82668   TATTCTTCCGGACTT                 GCCG CCG CGGC                 CTTTACAATTTACCG  68 102
LQRI_RS11065 2551619 .. 2551647 +  -6.8  -5.26875   GAACACACAAAAAAA       CGGAGT-GGGA CCTGTTTA TCCCAACTCCG        TTTTTTAATTCAGCC  88 39
LQRI_RS11130 2584300 .. 2584328 + -13.3  -5.24129   CAGGCATAACAAAAA        TCCTACGGATG ACCATTC CATCCGTAGGA        TTTTTTCTGCAACAC 100 85
LQRI_RS11145 2588942 .. 2588964 +  -8.5  -3.51411   AAAGAATAATCGTTT           GACTGGTTA TAGTT TGACCAGTC           TTCCTTTGAAAACCT  72 127
LQRI_RS11175 2598616 .. 2598656 + -13.5  -3.71924   AAATATTGCACTATA CTGTACAAAGGGCCAATC ATTGCC GATTGGCCCTTTGT-CTG  TTATTCCATGCTTTA 100 62
LQRI_RS11190 2601833 .. 2601853 +  -2.7  -4.14541   TATAACAAAAACCAT            TTTGAATTA TTG TAATTTGAA            TTTCTATAATTAATC  53 11
LQRI_RS11200 2606806 .. 2606852 + -13.6   -5.4505   AATATCTAAAATACA GAAAAGTACCTTTA-AAATTT ATACCA AAATTTCTAAAGGTACTTTTC TTTTTTCTTCACAGG 100 60
LQRI_RS11210 2609399 .. 2609412 +  -2.4  -4.37092   TAATCCATTACCATG               GACA TCAAAT TGTC                TTTTGTAAAACCAGT  59 495
LQRI_RS11345 2635287 .. 2635334 + -11.6  -4.25538   CTGCCGACAATTTTT AACAAATCGGCAGAGAAAGGT TGTTAAT ACCTTTTTCTGCCGATT-GTA TTCTTATTTATTATT 100 250
LQRI_RS16255 2638761 .. 2638786 + -10.6  -4.82548   AAAAGGCATGAAAAA         GCATAAATCC AATCAA GGATTTATGC          TTTTATATATTTTTC 100 30
LQRI_RS11385 NONE
LQRI_RS11390 2641691 .. 2641716 + -10.5  -5.69262   TTATTGATTTTCTCC         TGCCGGTTATT TAAA AATATCCGGCA          TTTTTGTTTTTATAA 100 48
LQRI_RS11395 2644852 .. 2644864 +  -6.3  -4.26188   ACATACAGGCAATCC                TGCTT TAT AAGCA                TTTTGCCTGTATGAA  70 237
LQRI_RS11430 2649670 .. 2649698 +  -9.6  -5.80248   TTTAGTCAAAAATTT        TGTCCGTGCC CAATTTTCA GGCACGGGCA        TTTTTTTGTCTGTTG 100 105
LQRI_RS11435 NONE
LQRI_RS11440 NONE
LQRI_RS11445 2654843 .. 2654877 + -21.8  -3.68222   AAACATATGTAAGAA     TGGGTATTCTTTTCAG TAC CTGAAAAGAATACCCA     TTCTTCACATTACAA 100 84
LQRI_RS11530 2673208 .. 2673246 + -14.7  -5.27399   GCAAAAAACATTTAA   GCAGGGAACATAACAGG CCAAC CCTAATATGTTCCCTGC   TTTTTTGCTGTGTTA 100 73
LQRI_RS11550 NONE
LQRI_RS11555 2678960 .. 2678987 + -10.6  -4.83593   ACGCAAAAAAGCTCA        TCCTCCGGTG GCATTAAG CGCCGGAGGA         TTTTTAATGCTTGTT 100 42
LQRI_RS11605 2690437 .. 2690471 +  -7.9  -4.93365   ATGTTTAAAATATGA     GGCAGGGGACG GTTCCGAGTTCTA TGTCCCCTGCC     TTTTTGCTTATGCCC  89 33
LQRI_RS11630 NONE
LQRI_RS11635 2696859 .. 2696872 +  -6.7  -3.56123   CCGTCCCAAAATCTT               TTGGG AATA CCCAA                TTCACTTTTTATTTT  64 349
LQRI_RS11670 2702504 .. 2702541 + -20.1  -3.20361   TCTGCAAAAAAATAG   AAGCCATTACTTCCGTG TAAC CACGGAAGTAATGGCTC    TTCAATTCCACTTTT 100 6
LQRI_RS11785 2729240 .. 2729277 +  -9.9  -4.17089   GCCAAATCAAATCCA   CCACCCATTGCCGCT CCGTTTAT AGCGGCAATCGTTGG    TTTTGAAAATTTCCA  89 519
LQRI_RS16270 NONE
LQRI_RS15720 2732037 .. 2732052 +  -4.8  -3.62522   CCGTCTTAGCAGAAA              TTAAAG CACA CTTTAA               TTCTTCCGCAAATTC  58 470
LQRI_RS11845 NONE
LQRI_RS11850 NONE
LQRI_RS11855 NONE
LQRI_RS11860 NONE
LQRI_RS11865 NONE
LQRI_RS11870 NONE
LQRI_RS11875 NONE
LQRI_RS11880 NONE
LQRI_RS11885 NONE
LQRI_RS11890 2747317 .. 2747327 +  -3.2   -3.0173   TGTATATTTATCAAT                 CCTT TAG GAGG                 TGGTTTGATATGTGT  45 203
LQRI_RS11895 NONE
LQRI_RS11900 2749873 .. 2749884 +  -2.2  -3.32109   CGGAAATAATAAACA                CC-CC ACA GGAGG                TATTCTGCTATGTAC  44 85
LQRI_RS11905 NONE
LQRI_RS11910 NONE
        nifH 2752642 .. 2752666 + -14.3  -3.90291   TCGAATTTGATTGGA          GCGGTCGGCAG TTT CTGTTGACCGC          TTTACTTAGCGAAAT 100 31
        deoD 2755118 .. 2755128 +    -4   -2.7644   CTTGGAATTATCTAA                 CAAA TAA TTTG                 GTTTCAACATTAAAT  46 26
LQRI_RS11930 2756256 .. 2756267 +    -3  -4.17089   GGCAACATATACGAA                TTAG ACGA CTAA                 TTTTAACGATTTGAG  57 14
LQRI_RS11935 2757864 .. 2757893 +  -4.3  -2.64155   GATAGAAAGGTGCGC       TGATTATGGTGGC CACT GTCAACAAAATCA        TACCTTTCAGCACCG  48 23
LQRI_RS11940 2758694 .. 2758705 +    -3  -2.84878   GCCAAAGGCTTTAAA                GATA TTAT TATC                 ATTTAAATTACAAGC  43 8
LQRI_RS11945 NONE
LQRI_RS11950 NONE
LQRI_RS11955 2762376 .. 2762411 +  -9.1  -4.85433   GTAAATGGGGCAGTC   GG-TATTCCGCCGTGCG TTTC TGC-CGGCGGAGTATCC    TTTTTCCCTTTGTAT  93 37
LQRI_RS11960 NONE
        deoC 2763767 .. 2763789 + -12.1  -2.62396   AGGAACCGATTAGGA           GGTAGCTGA TTATT TCAGCTACC           TCCTGTAAAAAAGTG  87 205
LQRI_RS11995 NONE
LQRI_RS12000 2773391 .. 2773411 +  -4.1  -3.92746   GGTACGCATCTCAAT            TCTTTCATA TGG TATGAAACA            TCTTTTTCAGCTAAC  56 62
LQRI_RS12010 2776073 .. 2776090 +  -3.5  -2.54896   CATTACATATATAAA             TAAGCTCC GAA GGA-CTTA             TACATTAAATACAAA  44 126
LQRI_RS12015 NONE
LQRI_RS12275 NONE
LQRI_RS12280 2831671 .. 2831690 +  -6.4  -5.63517   GAAGAATAATTTTAA            GGCTTGCT AACA AACAAGCC             TTTTTTCTTTGCACG  93 32
LQRI_RS16410 2838889 .. 2838905 +  -3.1  -3.39061   ACTGAAAATATATAA              TTTTTTA TTG TAAAAAG              TAATTTTTATTAAGA  48 36
LQRI_RS12355 NONE
LQRI_RS12360 2847173 .. 2847200 +  -7.1  -4.82998   TTGGAAATTACACAG        GTCAGGTGAAG CCATGT TTTCATCTGAC         TTTATTTTGCTTTGC  86 105
LQRI_RS12370 2850626 .. 2850650 +  -7.9  -4.67234   ACCCAATTGTAAAAA          GCTCTGGAT TTAAAGT GTCCAGAGC          TTTTTGGCATTCACT  82 65
LQRI_RS12415 2860169 .. 2860192 +  -9.6  -4.03586   GTTCAGTTAAACCCC          GAACCCCTTT TTCC ACAGGGGTTC           TTCTTCTCTTTACCC  86 106
LQRI_RS12425 NONE
LQRI_RS12430 2861814 .. 2861827 +  -2.3  -3.48718   TGTCTTCGTCAATTC               CGTGG CTTA CCAGG                TATCTTTTCATTGCC  47 478
LQRI_RS12495 2873531 .. 2873562 + -10.2   -4.6038   AGATAGATAAAACAA      GAGCCATTACTTCT AAAA AGCAGTATTGGCTC       TTTTCATTTGCTCTG  93 35
LQRI_RS12515 2879843 .. 2879853 +  -5.4  -4.41348   CTTGCTCCGTACACA                 GGAT CAA ATCC                 TTTCTTTGCAAGAAG  70 268
        aroF NONE
LQRI_RS12560 2890244 .. 2890257 +  -2.5  -3.14344   AGTTTGCAAATAAAT               TTTTA TCGG TAAAA                TTCGTACCACAAATA  43 49
        aroA 2891644 .. 2891667 +  -5.2  -5.56264   TACCGATAATAAAAA          CCGGACGCTG CAAA TATTGTCCGG           TTTTTTATATTTACA  87 88
       abc-f 2894670 .. 2894681 +    -3  -2.99471   AACATTCAACAGGCT                GTAT GAAT ATAC                 TGTCTATGAAAATCC  43 163
LQRI_RS12580 2896232 .. 2896245 +  -2.5   -4.2693   TGGTGGTAAGGAAGT               TTTAA GAAA TTAAA                TTATTTTAATAAATT  55 21
LQRI_RS12620 2909683 .. 2909700 +  -6.3  -3.25942   TATGATAAAAAAGAA             GAGAGTT AACC GACTCTC              TTCCTATGAAGCCCT  61 17
LQRI_RS12715 2931384 .. 2931399 +  -3.4  -3.43338   TCAGCAATTCGCGGT              TTATTT TGTT AAATAA               TTCCTTAATATCCAT  50 224
LQRI_RS12755 2940504 .. 2940543 + -10.8  -2.98387   CGTATATAGTATAAT  CA-AGGGGTTCAGGGAAAC TCT GGTTTCCTGAACCCCCCTG  TAATATTTTATACGC  83 32
LQRI_RS12785 2949156 .. 2949195 + -10.8  -2.98387   CGTATATAGTATAAT  CA-AGGGGTTCAGGGAAAC TCT GGTTTCCTGAACCCCCCTG  TAATATTTTATACGC  83 32
        hydE 2973792 .. 2973816 +  -8.6  -4.70319   GTGACAAATACAAAA          GCGATGGAAT ATCAC ATACCATCGC          TTTTACTTTTAATAC  89 180
        argC 2998955 .. 2998965 +    -4  -3.05463   CGTTTGGAGGGTATG                 GTTT TGG AAAC                 TTCAATGGAAACGGT  48 87
        argB 3000050 .. 3000065 +  -6.2   -2.8547   TAAGGGGAGGATTGA              TCCTTT TGAA AAAGGA               TATAGTGTCAAAAGT  58 203
LQRI_RS13015 3001067 .. 3001086 +  -6.6  -3.45634   ATATCTATTGCATTT            TTATACAT TTCT ATGTATAA             TTATAAATATTATTT  65 375
LQRI_RS13020 3002355 .. 3002375 +  -6.3  -4.02396   AGCATAAAGTTTAAT            TTAAGTTTA ACT TAAGCTTAA            TTTAACTTTTATTTA  68 57
        carA NONE
        carB NONE
        argF NONE
LQRI_RS13040 3008299 .. 3008350 +  -3.8  -4.57569   ATGAGTGATTTTCAA TCATGTCAAGGA-ATTGCCAACACA CAC TCTACTGGCTTTGTCCTTGACATGA TTTTTAAAACGCTAA  65 33
LQRI_RS13100 3020355 .. 3020394 + -10.8  -2.98387   CGTATATAGTATAAT  CA-AGGGGTTCAGGGAAAC TCT GGTTTCCTGAACCCCCCTG  TAATATTTTATACGC  83 32
LQRI_RS13205 NONE
LQRI_RS13210 3059288 .. 3059327 + -13.1  -3.04845   ATTGCGTCAAATACA  TTAAAATCGGCTG-TCCG ATTGA CGGAACAGCCGATTTTTA  TATCATTCTTATCAT 100 91
LQRI_RS13295 3081368 .. 3081395 +  -8.4  -3.60475   ATTCATAAATGCGGA        GGATGCTGCAGT CATT AATGCAGCACCC         TTTCACATCGGCATT  75 8
LQRI_RS16095 3088322 .. 3088336 +  -5.8  -3.76634   TGTACGGAAGGGATT               CTTTTT TTA AAAAAG               TTCTATCTTTGCCAT  64 121
LQRI_RS13335 NONE
LQRI_RS13340 NONE
LQRI_RS13345 3089796 .. 3089820 +  -5.6  -4.48903   AGCATAAACTATACA          GCGAGGTTAC AACAA GTTTCCTCGC          TTTTACTCTGTTTTC  69 127
        sleB 3090693 .. 3090737 +  -2.8  -4.18817   TTGCAATCTAACAAT G-TCGGGGAAGTTTGACGGAG CAAT CCCTCTCATACTTCCCCAAAC TATTTTTATTCGGTT  55 30
LQRI_RS13395 3103092 .. 3103113 +  -2.3  -3.92373   GTAGTATAAAAATAT           TCTTCATTA TCGG TAAAGGAGA            TTTATGCGTACGATA  50 37
LQRI_RS13400 3104104 .. 3104152 + -15.5  -3.55219   TGCCGTAAAAAGATA TTCTGCCGTAAAGCCGGCT-CT TAATTC AGAAGCCGGCTTTACGGCATCA TTATCTGCTCAGCTT 100 50
LQRI_RS13540 3131840 .. 3131860 +  -5.4  -2.67171   TACCATCATAAAAAA            GATAGTGC CTTAT GCACTACC            CTATTTACTGCCATA  52 440
LQRI_RS13595 3143098 .. 3143112 +  -4.2  -2.94099   CAAACCCCGTCCTCA               CCGG AAGGCAG CCGG               TCTGTCATAACAGAC  47 59
LQRI_RS13600 3143531 .. 3143541 +  -2.6  -3.71527   TTCATATGATGTACT                 TAAA AAA TTTA                 TTTAGATGGTTAAGA  48 10
LQRI_RS13605 3143995 .. 3144010 + -10.4  -5.01732   CATTAAACTCAAAAG              GAGCGG TTAG CCGCTC               TTTTTTGCAAACATT 100 35
        istA 3148737 .. 3148752 +  -4.7  -3.02698   CTGAAGAAAGACAAA              CTGCT GAAAAA AGCAG               GTTTCTATACCATAA  52 178
LQRI_RS13820 3194928 .. 3194942 +  -4.2  -2.94099   CAAACCCCGTCCTCA               CCGG AAGGCAG CCGG               TCTGTCATAACAGAC  47 59
LQRI_RS13930 NONE
LQRI_RS13935 NONE
LQRI_RS13940 3218178 .. 3218189 +  -5.8   -2.8092   GTATCGTCCATTTCA                CTCC CTGC GGAG                 TGTCCTCAAGTATTA  56 137
LQRI_RS13955 3221345 .. 3221386 + -17.5  -3.60296   AAACCAGATATCAAA CATGATAAAGGGCCTCAAG TTTC CTTGAGGCCCTTTATCACA  TTTGCACTCAAAATG 100 40
LQRI_RS13970 3223725 .. 3223749 + -11.5  -4.63928   CGCTTTGAATCCAAA          GCCTTGTTTGG TTC CAAAACAAGGC          TTTTTGCCGTGATGT  93 52
LQRI_RS13990 NONE
LQRI_RS13995 3229367 .. 3229399 + -11.4  -4.63184   AGGCAAATTAAAAAA      CCAGGTGCCTTG CTTCTTTCA TAAGGCACCTGG      TTTTTCCAATCAATT 100 46
LQRI_RS14005 3232104 .. 3232125 +  -5.8  -4.32857   TTCCGTACCAATAAT           CCTGCCGT AGCAAA ACTGCAGG            TTTCTATTTCAACGC  69 87
        lepB 3234113 .. 3234136 +   -14   -3.3543   AATTTCGTGTTTTAA          TAAAGGGGCT ATTC AGCCCCTTTA           CTTTTTACAGCCTTG 100 89
LQRI_RS14115 3256428 .. 3256446 +  -4.4  -3.72236   AATCGGCTATAAGGG             CGGCAGCC AGA GTATGCCG             TATGTTTTTTATACC  56 98
LQRI_RS14130 3258234 .. 3258269 + -12.1  -4.14615   TTAAAATCAGTATAA    TTGCAAAAGGGACTT CGTAAA AAGTCCCTTTTGTGA     TTTTACGCAATTTTT 100 66
LQRI_RS14185 NONE
LQRI_RS14190 NONE
LQRI_RS14195 NONE
LQRI_RS14200 3273277 .. 3273293 + -10.1  -5.02231   TAAATTGGTATTTAA              CCGCCTA TGT TGGGCGG              TTTTTGCTGTTTTTA 100 406
LQRI_RS14205 NONE
LQRI_RS14210 NONE
LQRI_RS14215 NONE
LQRI_RS14220 3276712 .. 3276726 +  -4.2  -2.76468   GCCCTCCTGTATTCA               TCCGGT GTA ACCGAA               TCATATTCGGTAATC  46 464
LQRI_RS14240 3281238 .. 3281253 +  -6.1  -4.15565   CGGCAAGCTTCACTT              TCGGC ATTTGA GCCGA               TTTTGCAATCCTAAG  71 228
LQRI_RS14290 NONE
LQRI_RS14295 3293109 .. 3293123 +    -5  -3.36415   ATTATAAGCCCAGTA               TATCTC TAC GGGATA               TTCCTCTACTTTGTG  54 501
LQRI_RS14305 3296093 .. 3296110 +    -2   -3.5947   TTAATAAAGTAGTTC             TGGGTT TTTTCT AACTCA              TTGTATGTAAAAATT  47 242
LQRI_RS14310 3297975 .. 3297990 +  -3.4  -4.56597   GGGAACTCAATTATA              TTTATT TTTA AATAAA               TTTTTGGGAGGGACG  63 52
LQRI_RS14315 3300982 .. 3301016 + -16.6  -4.29326   CCCGGTATGAAATTA     GCCTGTTAGAGACTTC GAA GCAGTTTCTAACAGGC     TTTCTTACGTTTGCA 100 51
LQRI_RS14355 NONE
LQRI_RS14360 NONE
LQRI_RS14365 3309773 .. 3309787 +  -7.2   -2.7535   AGGTTTTAGGACCTA               TTTTCG TCT CGAAAA               TACTATATTAACACA  62 142
LQRI_RS14370 3311911 .. 3311936 +  -9.1  -5.73672   TCATTAATCTAAAAA         GCTGTGGAA AATGCAAC TTCCACAGC          TTTTTTTACTTATTT 100 52
LQRI_RS14400 3320128 .. 3320146 +  -2.2  -4.06903   CATAACAACCGCTTC             CGCCCGGG TAA CCTTGCCG             TTTGGTTTAAAACTT  53 455
LQRI_RS16125 3330427 .. 3330446 +  -9.2  -4.85433   ACATGTTATAAAAAA            CGGGACTC TTTT GTGTCCCG             TTTTTCAGTTTCTAT  93 55
LQRI_RS14460 3332803 .. 3332813 +    -4  -2.71094   ATAAGATTGTCAAAG                 GAAT AAA ATTC                 TCCTGTCTCACTGTT  45 78
LQRI_RS14480 3338508 .. 3338526 +  -4.6  -3.93782   TATATTACTCAGCTG             TTTCTTTG CAC CGAAGAAG             TTTACTCTTCCGTAA  58 86
LQRI_RS14505 3346345 .. 3346358 +  -5.3  -3.46888   TGAAATTATCTTTCT               GAAGA CTCG TCTTC                CTTTTATTGTAAATC  58 42
LQRI_RS14510 3346684 .. 3346701 +  -9.1  -3.09787   TAGTAATCTGTGCGA             TGGGGGG CTTT TCCCCCA              CTTTGTATAATTTGC  74 62
LQRI_RS14515 3347628 .. 3347646 + -14.6  -3.84712   AGTGAATAATCATAA             CCACTGGC TAA GCCAGTGG             TTTGCTCTAGCCTTA 100 419
LQRI_RS14560 3355401 .. 3355411 +    -4  -3.16676   TACCCAGCCCAGTAT                 TTGT AAC ACAA                 TGTTAACTTGATACC  48 336
LQRI_RS14570 NONE
LQRI_RS14575 3359106 .. 3359156 + -10.9  -3.57674   ATCCGCTGCAATAAA TTATTGCCGATTTAATCCAAGGC GCTGAAA GTC-TGG-TTAAATCGGCAATAA TGTTTATCATACAGT  89 84
LQRI_RS14585 3361346 .. 3361359 +  -6.7  -3.36073   CCGGATATTCTTCTT               GGCAA TATC TTGCC                TCTTTCGGAAATGTA  62 195
LQRI_RS14605 3364492 .. 3364505 +  -3.8  -4.19238   ATCGGTTACAAGAAC               CACC CTGTCC GGTG                TTTTACACTTGACAA  61 363
        glgB 3367823 .. 3367870 + -15.8  -2.62184   AGGATTAACTCTAAT TAATTGCCACTTTGACCGGGCT TCTC AACCAGGTTGAAGTGGCAATTA TAATATCACGAAGCC 100 33
LQRI_RS14620 3368814 .. 3368829 +  -3.2  -3.46873   AAGATGCATTGATAT              TCATGC TGAT GCCTGA               TATTATTAAATTTGC  48 134
LQRI_RS14765 3406376 .. 3406413 + -20.3  -4.08706   GAAATCCTTGTATAA   TGTAAAGGGTCTAAATA ATAT TATTTAGACCCTTTACA    TTTATATCATACAAC 100 39
LQRI_RS14795 3412823 .. 3412845 +  -5.6  -4.08692   GGCTTTTTTCCAATT           CAAGCAGTTT AAA AAGCTCCTTG           TTTTGAAGAGACTTG  65 447
LQRI_RS15035 NONE
LQRI_RS15040 NONE
LQRI_RS15045 NONE
LQRI_RS15050 NONE
LQRI_RS15055 NONE
LQRI_RS15060 3463433 .. 3463451 +  -6.2  -4.30231   ACCACATAAATAACA             TAAATAAT TTA ATTATTTA             TTTGTGTTAATTATT  70 51
LQRI_RS15065 NONE
LQRI_RS15070 3466716 .. 3466732 +  -5.9  -2.81316   TAGACTCAAATTTAA              GAAGGTT TAA AACTTTC              CTTCTTAAATACTCA  56 77
LQRI_RS15075 3467445 .. 3467482 +  -9.2  -4.49906   AAGGTAAAGTTAAAA   CCGCCTGCC-ACTGAAA CATTT TTAGAGTTGGCAGGCGG   TTTGTTTACATATTC  89 40
LQRI_RS15090 NONE
LQRI_RS15095 3472896 .. 3472907 +  -5.8  -3.70037   TCATTTCATTTGCAG                CCCT TTCG AGGG                 TTTCCGTAGTAATTC  60 462
LQRI_RS15115 3476434 .. 3476457 +  -5.3  -5.26316   CTTGAAGTAACCAAA          AAAGAGGGA CAAAAA TCCCTCTTA           TTTTTTCTCAAATAG  80 48
LQRI_RS15125 3478489 .. 3478502 +  -2.5  -3.33009   AAAGGAATCAAAAAT               TTAAA GGAA TTTAA                TTATGGGGAATTTTG  44 44
LQRI_RS15130 NONE
LQRI_RS15135 3480360 .. 3480376 +  -2.3  -2.83403   CTATTACATTATCTG              CTTTTTT ATC AAGGAAG              GTTTGGTAGCCGGCC  41 362
LQRI_RS15170 3492218 .. 3492229 +  -4.4  -2.82936   TTTCTCCCATGTATG                CTGT TATA ACAG                 ATTTCCACTTTCCAT  48 387
LQRI_RS15245 3507152 .. 3507187 + -10.6  -2.50197   GATATAAAATACATA    ATGAAGGGAATATAGA TTTC TCCATATTCCCTTCAC     GTCCTTTCTTATCTT  79 11
LQRI_RS15260 NONE
LQRI_RS15265 3510719 .. 3510748 + -13.7   -4.2602   GGGAAATTTACCTGT       TTGCACCCCCT TTTGGTTC AGGGGGTGCAA        TTATTTATTCATCTC 100 44
LQRI_RS15280 3513002 .. 3513018 +  -2.4  -4.84673   TAAAAATTAAATGGT              TTATAA TTTTT TTATAA              TTTTGTATTGTTTAC  63 420
LQRI_RS15350 3524722 .. 3524747 +  -9.2  -4.93365   ATTGTATTTGATAAA         TAGACGTTTA ATATTG TAAACGTCTA          TTTTTAATTCTCACA  95 81
LQRI_RS15435 NONE
LQRI_RS15440 3548711 .. 3548742 + -10.3  -2.52161   ACTTGCAAAACAAAG      ATTGAGATGACAC CGCTTT GTGTCATCTCAAA       GTATCTTATACCTTT  79 138
LQRI_RS15450 3551020 .. 3551040 +  -5.4  -4.30177   TTCTGTGACAGCCCG            GCCGTCAA TAATT TTAACGGC            TTTCTTCATCTCATC  67 473
LQRI_RS15470 3555880 .. 3555925 + -10.7  -5.02074   GATGGACAAAACATA TAAT-TTAACAGGCACTCTTCA TTT TGAGGAGTGCCTGTTTATATCA TTTTTTACCGAATCC 100 51
        yfbR 3563330 .. 3563349 +    -2  -5.01497   GCAACGAACTTGCCG            GGCATTAC ACTG GATATGCC             TTTTTCTGTCCTAAT  65 378
LQRI_RS15505 3566334 .. 3566360 + -12.4  -5.17054   TAAACAAATCAAAAA         GAGCCGGAAA TCAAGCT TTTCCGGCTC         TTTTTTAGCTCTTCT 100 46
        rpmH 3576722 .. 3576739 -  -7.7  -5.33026   CAATTTAAATAAAAA             GACCACA TTTA TGCGGTC              TTACGCTGAAAGAAC 100 26
        rnpA NONE
        yidD NONE
LQRI_RS15540 NONE
LQRI_RS15535 3574468 .. 3574495 -  -8.6   -4.7339   AATAAACTGCAAAAA        TGGTTCAAGA TGAATTTT TCTTGAACCA         TTTGCGTACTCCAAA  89 119
        mnmE 3572696 .. 3572713 -  -2.7   -4.3255   CCCGCAATGAATAAA             CTGCA GGTCCTTT TGCAG              AATTTAATATTTTTG  55 306
        rsmG 3570261 .. 3570281 -  -6.3  -2.57132   CCGTCTTTTCATAAT            TCCTTTTTT TTT AAAAAAGAA            TCGTTCGTCCAAATA  56 76
         noc 3569202 .. 3569226 -  -2.2  -5.75478   AAGGATACAAAAAAA         CAG-GTATGAT AATA ATCATTCCCTG          TTTTTTGTAAAATAA  78 96
        gyrA 3566334 .. 3566360 - -12.4  -5.13137   TAAACAAATCAAAAA         GAGCCGGAAA TCAAGCT TTTCCGGCTC         TTTTTTAGCTCTTCT 100 145
LQRI_RS15495 3560195 .. 3560209 -  -8.6  -2.83715   CGTAGTATCATTATA               CTCCTT AGA AAGGAG               GTGATCCAGCCGCAC  71 19
LQRI_RS15490 3559996 .. 3560009 -  -8.1  -3.01791   ATCTTTTTCGGAACA               CAGGC TATC GCCTG                TATCCCGAACTGGTG  70 36
LQRI_RS15485 3556858 .. 3556868 -  -5.4  -3.73008   TTCAAAGATATATAA                 TGCT TAA AGCA                 AGACTTTCCTTCTAT  59 70
         rrf 3556669 .. 3556699 - -16.3  -5.36441   TTTTGATATAAAAAA       CAAAGCCCTACGG AACAA CCGTAAGGCTTTG       ATATTAAATCTGGCA 100 33
LQRI_RS15475 3555883 .. 3555921 - -11.8  -3.86658   GGACAAAACATATAA   TTTAACAGGCACTCTTCA TTT TGAGGAGTGCCTGTTTAT   ATCATTTTTTACCGA 100 2
        nadA 3553476 .. 3553488 -  -2.7  -3.57144   CCTCGGAGCCTTAAA                TTCAA CCA CTGAA                ACAAACATAAATCAG  48 37
        nadB NONE
        nadC 3550428 .. 3550438 -  -5.4  -4.08692   CAACGTGGGGGAAAA                 CAGT TTC ACTG                 TGCACAATCTGCTAA  65 469
LQRI_RS15445 3548712 .. 3548741 - -13.8  -3.93868   CTTGCAAAACAAAGA       TTGAGATGACAC CGCTTT GTGTCATCTCAA        AGTATCTTATACCTT 100 55
LQRI_RS15430 3547155 .. 3547170 - -10.4  -4.66163   ATGTGCATTTAAAAA              GCCGGT TTTC ACCGGC               TTTTCCTACGCATTA  95 49
LQRI_RS15425 3543661 .. 3543680 - -13.6  -5.14563   TTTTGTATGAAAAAA            GGCTTCCC ATTT GGGAAGCC             TTTTTATCCGAAGTA 100 44
LQRI_RS15420 NONE
LQRI_RS15415 NONE
LQRI_RS15410 NONE
LQRI_RS15405 NONE
LQRI_RS15400 NONE
LQRI_RS15395 3535675 .. 3535689 -  -6.4  -3.06302   ATTATCTCTATTCAA               GATCGC TGT GCAATC               TTTGTTTTATCCCCT  59 32
LQRI_RS15390 NONE
LQRI_RS15385 NONE
LQRI_RS15380 NONE
LQRI_RS15375 3530536 .. 3530552 -  -3.7  -6.25741   AAACAATAAAAAAAA              CATTACT GTC AGGAATG              CAGGCAAAATACTGT  91 205
LQRI_RS15370 NONE
LQRI_RS15365 NONE
LQRI_RS15360 3526736 .. 3526751 -  -4.8  -5.48063   ATTGAATACAAAAAA              CAAAAA CAAA TTTTTG               TAAACAAAAATTAAT  82 36
LQRI_RS15355 3524722 .. 3524747 -  -9.2  -3.89524   ATTGTATTTGATAAA         TAGACGTTTA ATATTG TAAACGTCTA          TTTTTAATTCTCACA  81 69
        yycF NONE
LQRI_RS15335 3521524 .. 3521542 -  -3.2  -4.59089   TAACCGAGAAATAAA             GACAAAAT TAA ACTTTATC             CCCCCTAATGCTAAT  62 90
LQRI_RS15330 NONE
LQRI_RS15325 NONE
LQRI_RS15320 NONE
LQRI_RS15315 NONE
LQRI_RS15310 NONE
        rlmH NONE
LQRI_RS15300 3515051 .. 3515061 -  -2.6  -4.81163   CAAATAGTAATAAAA                 TATA TGA TATA                 AGAAATTTTGTACTC  63 107
LQRI_RS15295 3514429 .. 3514449 -  -7.1  -3.15292   ATAAACATCATTTAA            TAATAATAT AAC ATATTATTA            TCTAAACATAAATAT  64 99
LQRI_RS15290 3513601 .. 3513627 - -15.2  -3.96841   TTTCAACAAACATAA         TGACCACCCGCT ATA AGCAGGTGGCCA         CCCTCAACTTACCGT 100 58
LQRI_RS15285 3513346 .. 3513369 -  -6.8  -4.03995   TGTGGCATAAAAACA          GGTTACAG TTAAAATC CTGTAACC           CTTGATATTGGCGGA  71 34
LQRI_RS15270 3510308 .. 3510318 -  -6.8   -3.1247   ATGGTTGACATTGAA                 CCTC AAA GAGG                 AGAACTGAAATTGGT  60 494
LQRI_RS15255 3508087 .. 3508099 -  -4.9  -2.89981   TATAAGTATATCATA                TAAAC CAA GTTTA                TGACTATAATTCCGC  51 75
LQRI_RS15250 3507153 .. 3507186 - -16.3  -3.87562   ATATAAAATACATAA     TGAAGGGAATATAGA TTTC TCCATATTCCCTTCA      CGTCCTTTCTTATCT 100 35
        cas6 NONE
LQRI_RS15235 NONE
       cas7i NONE
        cas5 NONE
LQRI_RS15220 NONE
        cas4 NONE
       cas1b NONE
        cas2 3497772 .. 3497807 -  -8.5  -6.12458   CAAAAAAACAAAAAA    TCCCTCTAAACAGCTA CAAAT CAGC-GTTTAAAGGGA    ATTAATAAATTTCGT 100 81
LQRI_RS16340 NONE
LQRI_RS16130 NONE
LQRI_RS15955 NONE
LQRI_RS15185 NONE
LQRI_RS15180 3492450 .. 3492480 -  -2.6  -5.49234   ATATGGAATAAAAAA       TTTGCACAAATACT TGG AGAATTTGCACAGA       TAAGCTTAATTTTGA  72 78
LQRI_RS15175 3491403 .. 3491415 -  -4.8  -3.61175   GACAGAGCAGAAAGA                TGGC TATTG GCCA                TGCAGAAGCAGATCT  56 439
LQRI_RS15165 3489922 .. 3489950 -  -7.5  -3.82187   ATAAAATAAATAATA        CCCCAAACCAT TTGCTTG ATTGTTTGGGG        GTTTTTACCGTTCTA  74 38
LQRI_RS15160 NONE
LQRI_RS15155 NONE
LQRI_RS15150 3481973 .. 3482002 -  -8.7  -3.65812   GCCTCCCTAATACAA       TCTGTGGAGAGGCA TAA TGCCTCTCCA-ATA       CAAACAATAATGGTT  77 130
LQRI_RS15145 NONE
LQRI_RS15140 3479689 .. 3479702 -  -6.7  -3.11024   GGCTTGAAGACAAAG               CGGAT GTCT ATCCG                TCAACCCTTTCGGGC  60 369
LQRI_RS15120 3476437 .. 3476454 -  -7.7  -5.32565   GAAGTAACCAAAAAA             GAGGGAC AAAA ATCCCTC              TTATTTTTTCTCAAA 100 26
LQRI_RS15110 NONE
LQRI_RS15105 NONE
LQRI_RS15100 3472463 .. 3472475 -  -3.5  -4.95854   CAAAAAATTTAAAAA                TTTTT TAT AAAAA                TGCTAAAGTCGCCTT  69 300
LQRI_RS15085 3469382 .. 3469415 - -16.1  -5.58454   GTTACATTAAAAAAA     TTCCCTCCGGACGGA AAGG TTCGTCCGAAGGGAA      TTTCCAAAATGCTGC 100 63
       abc-f 3467445 .. 3467482 -  -9.2  -4.37198   AAGGTAAAGTTAAAA   CCGCCTGCC-ACTGAAA CATTT TTAGAGTTGGCAGGCGG   TTTGTTTACATATTC  89 31
        pheA 3457380 .. 3457390 -  -5.4  -2.67228   ACCACAAAATAAACT                 TTCG CAC CGAA                 TTTCCCAAAAAACGA  52 76
LQRI_RS15025 NONE
LQRI_RS15020 NONE
        rplI NONE
        dnaB NONE
        tilS 3451488 .. 3451499 -  -4.4  -2.54325   TCCTCCTAAATATAC                GCTT TTTT AAGC                 TATTTTTAATCTATA  48 147
         hpt NONE
        ftsH 3448933 .. 3448953 -    -4  -5.77856   AATAAAGTAAAAAAA            GAGACAGT TTATC ACCATCTC            TTTTCAGAAAGCTGT  86 58
LQRI_RS14990 3448164 .. 3448182 -  -7.5  -5.86465   AATAACATAAAAAAA             CCTCTTT CACAC AAAGAGG             ATTCTTTTTTTATCC 100 257
        metK 3446684 .. 3446722 - -18.3  -5.03314   CTTATTTTCAAAAAA   CAGGCCAAAGCAGACAA ATTTA TCGTCCGCTTCGGCCTG   TTTATTGCTTACTTT 100 173
LQRI_RS14980 3446199 .. 3446210 -  -4.4  -4.43397   TTCGAAAAGAAAGAA                GGAA AATA TTCC                 TATACATTTCTTCTT  65 25
LQRI_RS14975 NONE
LQRI_RS14970 NONE
LQRI_RS14965 3442555 .. 3442575 -  -2.7  -4.18494   TATCGTCATCTAAAA            TATTTAATT AAT AAATAAATA            TTACTATTATTAAGT  55 132
        flgM 3442105 .. 3442147 -  -2.1  -2.88887   CTGAAATAAAATTTA TTGCGGGACAACTCGGAA TTTCTTTC CTCCTA-TCATCCCGCAA ATACCAAATCATCCT  41 34
LQRI_RS14955 NONE
        flgK NONE
        flgK NONE
        flgL 3437485 .. 3437498 -  -2.5  -3.28712   GGGTTTGTGTTATAA               TAATA CCCA TATTA                CCACCCACTCTAACC  44 65
LQRI_RS14935 NONE
        fliW NONE
        csrA 3436138 .. 3436150 -  -3.3   -3.2268   ATTACAAAAATCACA                CCGGA AAT TTCGG                CAATAAAAAAAGTGG  48 83
LQRI_RS14920 3434430 .. 3434471 -    -6  -2.90075   TTTGGTGCAAGGATA TGGCCTTTTATCTATTCG GCGCCG CTAATAGATAAATTGCCA  TTATCCCTGTACATC  56 132
LQRI_RS14915 NONE
LQRI_RS14910 3432576 .. 3432599 -   -16  -5.03747   AAATGTTTTAAAAAA          GGCCGGCAAG AATC CCTGCCGGCC           TTTTTTTGTTAAGAT 100 74
LQRI_RS14905 NONE
LQRI_RS14900 NONE
LQRI_RS14895 NONE
LQRI_RS14890 NONE
LQRI_RS14885 NONE
LQRI_RS14880 NONE
        pseI NONE
        pseH NONE
LQRI_RS14865 NONE
LQRI_RS14860 NONE
LQRI_RS14855 NONE
LQRI_RS14850 NONE
LQRI_RS14845 NONE
        pseG NONE
        pseC NONE
LQRI_RS14830 NONE
LQRI_RS14825 NONE
        fliD NONE
        fliS NONE
LQRI_RS14810 3413739 .. 3413755 - -10.1  -5.56372   AAAGCAAAATAAAAA              CCCCGGA AAA TCCGAGG              TCCAAAACTATTTCT 100 33
LQRI_RS14800 3411900 .. 3411920 -    -4  -4.17316   AGTTTGTGAAAAGAA            TGATTTGC TTGGT GCAATTCA            ATACGTTAAAAACAA  61 503
LQRI_RS14790 NONE
LQRI_RS14785 NONE
        leuC 3408135 .. 3408149 -  -4.3  -3.93782   TGATTTAAGATTAAA               GTTCA TCCGG TGAAC               CTATTCTTCCCAAAA  58 6
        leuD NONE
        leuB 3406376 .. 3406413 - -20.3  -3.30635   GAAATCCTTGTATAA   TGTAAAGGGTCTAAATA ATAT TATTTAGACCCTTTACA    TTTATATCATACAAC 100 93
        iadA NONE
LQRI_RS14750 3403883 .. 3403902 -  -2.9  -2.83905   TCACAACGGACTATA            TGCCAAGA TATCG TCT-GGCA            TAGTTCATTATTACT  43 1
LQRI_RS14745 NONE
        cphA 3400263 .. 3400280 -  -4.9  -5.24799   TCATAAATAGAAAAA             GGACAAA ACTT TTTATCC              AACATTCTGAATTAC  79 20
        folE 3399519 .. 3399548 - -17.3  -4.07568   CGGGTTTTGTGAAAA       TGAGCCAAGAGGA ACCA TCCTCCTGGCTCA        TCTTCCGTTTATGAG 100 23
LQRI_RS14730 3398573 .. 3398596 -  -3.8  -5.64274   TTATGCATAAAAAAA          GCAGCAAGTT GAAA AAAATGCTGC           AATCGGACGGATAAT  81 160
LQRI_RS14725 3397733 .. 3397744 -  -4.4  -3.18582   CAGCTTACCCAGTAA                CTCA ATAT TGAG                 AAGGTGCTTGCAAAG  52 15
LQRI_RS15950 NONE
LQRI_RS14710 3396417 .. 3396432 -  -6.1  -3.72695   ACCCGCTGTATTAAA              CGACC TTGACC GGTCG               TGCCACAAGATTATT  64 52
LQRI_RS14705 3395263 .. 3395279 -    -3  -4.08485   GTCATGTAAAGGAAA              CCATAA CTCAT TTACGG              TGATATTTCTATTCT  55 113
LQRI_RS14700 NONE
LQRI_RS14695 NONE
LQRI_RS14690 NONE
LQRI_RS14685 3392402 .. 3392429 -  -3.5  -3.59431   AATAATAGAATAATA        GCCTGC-TTTAA TAATT TTATATGCAGGC        TTTTTTATTCGAATC  52 65
LQRI_RS14680 NONE
LQRI_RS14675 3389445 .. 3389481 - -13.9   -3.5241   CATTGTGCACAAACA    TAAATCCACCTGCAAAA CAC TTAAGCAGGTGGATTTA    GCCATTCATAACAAT 100 48
LQRI_RS14670 3387909 .. 3387927 -  -4.6  -4.41348   CTCGGCTCAAAGAAA             TTTTTCAG TTG CAGAAAAA             TCCTCTTACCTCAGC  65 80
LQRI_RS14665 NONE
LQRI_RS14660 NONE
LQRI_RS14655 NONE
LQRI_RS14650 NONE
LQRI_RS14645 NONE
LQRI_RS14640 3374331 .. 3374345 -  -2.2  -2.67747   GCTCTAGATTAGAAC               TAATTT CAA AAACTA               CATCTTATTTAGGAA  40 30
LQRI_RS14635 NONE
LQRI_RS14630 3369035 .. 3369071 - -12.4  -3.70676   TATAGGGAAAAGGAA    GAGGCGACAAGAAAAG GTTTT CTGCTCTTATCGCCTC    AACTGTCAAAATGTT  95 100
        nagA 3363801 .. 3363815 -    -7  -2.71119   ACTTACGGACATAAT               GCCGGC GAT GCCGTC               CTGGTTACATTTGCA  56 336
        rpsF NONE
LQRI_RS14595 NONE
        rpsR 3361201 .. 3361227 -  -7.3  -6.01187   AAGCAAACAAAAAAA         CAGCCCGCA AACTCCAAA TGCAGGCTG         CTTTTATTTTTCATC 100 44
        galU 3359106 .. 3359156 -  -8.7  -4.15222   ATCCGCTGCAATAAA TTATTGCCGATTTAATCCAAGGC GCTGAAA GTCT-GG-TTAAATCGGCAATAA TGTTTATCATACAGT  82 124
LQRI_RS14565 3355043 .. 3355056 -  -2.5  -3.66166   GCCGGAAAAAAGATA               TTTAA AATC TTAAA                CCACCAATACAAAGA  50 130
LQRI_RS14555 3353291 .. 3353317 - -11.7  -6.28401   TAAAAAATAAAAAAA         CCCTGTAATCC AAAAA GGATTACAGAG         GATTGTTTTTATGGT 100 37
LQRI_RS14550 NONE
LQRI_RS14545 3350128 .. 3350142 -  -8.6  -4.74103   TGGGGAACTTAAAAA               GAGATG CCT CATCTC               TAGACACCTCTTTTG  93 60
LQRI_RS14540 3349834 .. 3349858 -  -9.3  -5.39681   AGAATCAAACAAAAA          CCCGCTAATCC TCG AAACTAGCGGG          TTTTGTGTGGAGCTG 100 33
LQRI_RS14530 3348307 .. 3348326 -  -8.6  -5.61689   AAAAGCAATAAAAAA            GGATCC-GG TCG CCTGGATCC            TCTGACAACTGTACC 100 40
LQRI_RS16415 3347628 .. 3347646 - -14.6   -3.6149   AGTGAATAATCATAA             CCACTGGC TAA GCCAGTGG             TTTGCTCTAGCCTTA 100 87
LQRI_RS14520 3347009 .. 3347019 -    -4  -4.40963   ATGCCTGAAAAAGAA                 CAAT CAA ATTG                 CAACAAATGTTATCA  64 219
LQRI_RS14500 3344092 .. 3344104 -  -4.9  -2.73203   TCATTAACAAGCAAT                TGATA TTA TATCA                GCGCCCATCATTTTT  50 390
         rho 3341888 .. 3341902 -  -2.1  -4.08064   AACCTTTTGTGAAAA               TGCAT TTCCG ACGCA               TTTTCGTAAAATTTT  52 123
        rpmE 3341575 .. 3341610 -  -5.6  -6.20267   GCAAAAAGAAAAAAA    TAAATAAGAGGACTAA ATAC TTAATCCCCTCATTTT     ATAATATTGATAAAT  95 64
LQRI_RS14485 3338154 .. 3338173 -  -9.3   -3.9642   AAAGACGGAAGCAAA            GCATGGG TCAACG CCCATGC             TTTCAACAGCTACAT  79 336
LQRI_RS14475 NONE
LQRI_RS14470 3333996 .. 3334015 - -11.4  -4.04397   ATCTGCATAAAAACA            GGGAGGCC CGAA AGCCTCCC             ATTAAAAATCCATGT 100 49
LQRI_RS14465 3332515 .. 3332526 -    -3  -3.40444   ATACTGAAAAAAGTA                TTTC AATT GAAA                 AAGGCGACCGATTGT  46 250
        yyaC 3330658 .. 3330672 -  -4.4  -3.27951   TATGTGATTACAATA               TATAAT ATT ATTATA               CCATTATTATAACTT  52 121
LQRI_RS14450 3330427 .. 3330446 -  -9.2  -5.26918   ACATGTTATAAAAAA            CGGGACTC TTTT GTGTCCCG             TTTTTCAGTTTCTAT  95 37
LQRI_RS14445 3329326 .. 3329365 -  -5.8  -5.26875   CCCTCAATGAAAAAA  GCGTCTTTCAGTCAAG CAAGAAAT CTCAACCCAAAGACGC   AGTTATATTTTTAAA  83 107
LQRI_RS14440 3328445 .. 3328459 -  -2.8  -4.19238   CTTTTAATTCTAAAA               GCAACA TTT TGTTTC               TTTTATAACCCTTTA  55 67
LQRI_RS14435 3327385 .. 3327413 -  -5.4  -3.05596   TATTTTTTTATTTAA        TAGAACAAACCC CTTCC AAGTTTGTCCTA        TTAGCCTTAGTTAAT  54 59
LQRI_RS14430 3327105 .. 3327122 -  -5.5  -5.54264   AAAGATTCAAAAAAA             GCGCC TTGAATTC GGCGC              TTTATAAATAAACTC  87 136
LQRI_RS16120 3326731 .. 3326762 -   -11  -5.96894   ATTGAAACAAAAAAA      TACGGGCAAAATCT GGAA AGACCTTACCCGTA       CTTTTCAACAACTTT 100 39
LQRI_RS14425 NONE
LQRI_RS14420 3322976 .. 3323012 - -12.7  -5.27335   GTGTCCAAATAAAAA    TAAGATTATAAGAAATA GCA TTTTTCTTATAATCTTA    TTTCAATAATATATC 100 151
LQRI_RS14415 NONE
LQRI_RS14410 NONE
LQRI_RS14405 3319816 .. 3319859 -  -3.2  -4.99056   TAAGAGAATTAAAAA TCTCCTCCTTGTGTGAAAATT GCA AAACAACAC-CAAGAAGGAGA TTTTTATAGCGGCAT  67 123
LQRI_RS14395 NONE
LQRI_RS14390 3315568 .. 3315581 -  -2.5  -2.98356   AGCCAAATTCACATA               TTTTA CAAA TAAAA                CTATAACAAATCTAA  42 37
LQRI_RS14385 NONE
LQRI_RS14380 NONE
LQRI_RS14375 3311911 .. 3311936 -  -9.8   -4.7629   TCATTAATCTAAAAA         GCTGTGGAAA ATGCAA CTTCCACAGC          TTTTTTTACTTATTT 100 88
         ffs 3307401 .. 3307421 -  -9.9  -4.45115   ACTAATATAAAATAA            GCTATTTAA TAA TTAAATAGC            TTTCCACAACAATTT  93 82
        dnaX 3305663 .. 3305676 -  -2.5  -2.55337   ATACCTAACCAACAT               TATAT ATCA ATATA                TGCTAAAAAGACCAG  40 56
LQRI_RS14340 NONE
        recR 3304306 .. 3304329 - -13.2  -3.53881   ATCATAAATACAACA          GCTGAATCCC TTGA GGGATCCAGC           ACACGTTTCCATGCA 100 314
LQRI_RS14330 NONE
LQRI_RS14325 3302606 .. 3302626 -  -2.6  -2.67764   TACACAAAAAATCAT           TGCCGAAGG TAAT CCTT-GACA            CCTTCTGGTCATGGT  40 59
LQRI_RS14320 3300982 .. 3301016 - -14.4  -2.96695   CCCGGTATGAAATTA     GCCTGTTAGAGACTTC GAA GCAGTTTCTAACAGGC     TTTCTTACGTTTGCA 100 195
LQRI_RS16335 NONE
LQRI_RS16330 3292467 .. 3292484 -  -2.1  -4.27467   GAATACTAAGACAAA             TTAC-TCT TGA AGATGTAA             AAAACGCAATCAGGA  56 265
LQRI_RS14285 NONE
LQRI_RS14280 3288527 .. 3288547 -    -9   -5.9667   AAAAACACAAAAAAA            GGCTACCC TTTTC GGATAGCC            TGCAATATGACAATG 100 55
LQRI_RS14275 NONE
LQRI_RS14270 3286598 .. 3286608 -  -2.6   -3.4811   TTTCTGACAATAATA                 TAAT TCT ATTA                 TCTATAACCTAATTT  46 128
LQRI_RS14265 NONE
LQRI_RS14260 NONE
LQRI_RS14255 NONE
LQRI_RS14250 NONE
LQRI_RS14245 3280941 .. 3280956 -  -3.2  -2.73676   TTGAAATTAAAGGTA              TATCCC CTTC GGGAAA               AATAGCTGTATTAAT  43 101
LQRI_RS14235 NONE
        sigI NONE
LQRI_RS14225 3275910 .. 3275943 -  -3.7  -4.09739   TGAAGGTTTCGAAAA     CTTCTATCCGGGGGA AATA TCCGGCGGAATGAAG      CAAAGAGCAGGTATT  59 436
LQRI_RS14180 NONE
LQRI_RS14175 NONE
LQRI_RS14170 NONE
LQRI_RS14165 3263023 .. 3263036 -  -3.1  -2.94032   AGCCTGTAAGCAAAC               GTTGC ATTT ACAAC                AAAGGCCTTACTGCC  43 33
LQRI_RS14160 3262427 .. 3262449 -  -5.6  -3.71472   AACAATAAATTACAA           TGAGGCAT CAGATAC ACGCCTCA           AATAAACATTCTGCA  59 86
        holB NONE
LQRI_RS14150 3260353 .. 3260371 -  -2.4  -4.37886   GCATCGGTTATAAAA             TATGCCAT TGT ATGGTACA             CCTCCTATATATATT  58 159
LQRI_RS14145 3259939 .. 3259955 -  -2.3  -3.57792   TCATGTATCCCGAAA              TTATTCA GCA TGTATAA              ACAAGCATATATAAA  47 260
LQRI_RS14140 NONE
        rsmI 3258242 .. 3258261 -  -8.6  -4.22338   AGTATAATTGCAAAA            GGGACTTC GTAA AAAGTCCC             TTTTGTGATTTTACG  87 79
LQRI_RS14125 NONE
LQRI_RS14120 3255911 .. 3255923 -  -3.3  -3.18031   CAAAACAGAAATAAT                CACCG CAT CGGCA                TCCCCTCTTCTTGTA  46 462
        metG NONE
LQRI_RS14105 3252187 .. 3252201 -  -2.8  -5.24129   CTTTTCCATAAAAAA               TTTACC TCC GGTCAA               TATTCTTCTTAACTC  69 111
LQRI_RS14100 3251515 .. 3251535 - -10.5  -4.99638   ATATTTATACAAAAA            GCAGGTAAA TGA CTTACCTGC            TGCCTGAATTTTAAG 100 119
LQRI_RS14095 3250120 .. 3250140 - -10.4  -4.28049   TCCAAAATTTTAAAA            GCCGGGAC ATTCA ATCCCGGC            CCCATTCAGTCCCTT  95 112
        rsmA 3249068 .. 3249112 - -15.4  -5.63103   TGGCAAGTAAAAAAA TAAACCGTTTATACTCTCAA AAAGA TTGAAAGTATCAACGGTTTA TCATCTTCATTATCG 100 66
LQRI_RS14085 3247597 .. 3247608 -    -3  -4.26344   ATATTGCGATTAAAA                TATC TAAT GATA                 CCTGACAACATCCAT  57 41
LQRI_RS14080 3246821 .. 3246848 -  -2.7  -5.93252   GCCAAAAATAAAAAA        GCCTACGGC GCAGTTAAAA GCCATAGAC         TAAAAATATCTTGCC  82 65
LQRI_RS14070 3243731 .. 3243750 -   -15  -4.84529   TTAGAAATGTAAAAA            GGACCGGC ACAA GCCGGTCC             TTTCAAATCAGTTTT 100 45
        zapA 3243113 .. 3243131 -  -6.7  -5.25735   GTAAAAAAGTAAAAA             GAAGCGC CCTTT ACGCTTC             CCTGCCATTTAACCG  88 53
LQRI_RS14060 NONE
LQRI_RS14055 3239633 .. 3239649 -  -2.9  -2.76162   TATTTTATCGGAAAG              TTCCTGC TTC ACCGGAA              AACATCTTACTTTAC  42 57
LQRI_RS14050 3238999 .. 3239051 -  -7.9   -2.8939   AGAATTAAAAATTCA TACACTGCAAAAAGCTCAAGGTTC TCCCCT GACCTTTGAGCTTTTTGCAG-GCT TTTTTTATTACTCCC  66 33
        dinB NONE
LQRI_RS14035 3236643 .. 3236665 -  -2.7  -4.62336   ACTGCATGTCAAAAA           GCTCCTCAA TTTCT TTGAGAACC           GACGGTTTTAATGAT  60 154
        hflX 3234803 .. 3234813 -    -4  -2.72799   CTTTCATATATATTA                 GAAA AAC TTTC                 ATATATATAATATAT  46 98
LQRI_RS14025 3234117 .. 3234132 - -10.4  -4.15044   TCGTGTTTTAATAAA              GGGGCT ATTC AGCCCC               TTTACTTTTTACAGC  91 57
LQRI_RS14015 3232545 .. 3232556 -  -2.2  -2.97588   ATTTAAGTCAAATCA                GCCGG CCA CCG-C                TTGCAATCAGCGGTG  41 45
LQRI_RS14010 3231901 .. 3231928 -  -8.6  -4.57791   AAGCAAAGAAAACAA        GGGAAGCGA-ATT TAT AATATCACTTCCC        ATTCAGCTCTGTGAG  87 226
LQRI_RS14000 3229817 .. 3229849 - -12.9  -5.49568   AATTTAAAACAAAAA     GCCTTCCTGCAATG CTTGTT CAT-GCAGGAAGGC      GGGAAATTTCAATCC 100 51
LQRI_RS16115 3229367 .. 3229399 - -10.7  -5.38497   AGGCAAATTAAAAAA      CCAGGTGCCTT GCTTCTTTCAT AAGGCACCTGG      TTTTTCCAATCAATT 100 99
LQRI_RS13985 3226077 .. 3226093 -  -3.7  -4.21439   TAACCCCAATAGAAA              GAAACTG CAT CAACTTC              ACATCCCTTCAAAAC  58 252
        ytxC 3225127 .. 3225145 -  -7.3  -5.21709   TTTTATATCAAAAAA             GCGGGCC TGTTC GGCCCGT             TTTCGCGTGTTTAAG  91 43
LQRI_RS13975 3223432 .. 3223442 -  -5.4  -3.95036   AACGACTTTAAAGAA                 CTGT TCC ACAG                 CCGCAAGGGGTTTTG  63 274
LQRI_RS13965 NONE
        ssrS 3221345 .. 3221386 - -21.9   -3.9163   AAACCAGATATCAAA CATGATAAAGGGCCTCAAG TTTC CTTGAGGCCCTTTATCACA  TTTGCACTCAAAATG 100 27
        cysE NONE
        cysS 3218113 .. 3218139 -  -7.2  -3.52503   AAAGACAGCAAAAAT         GCGGACCACCCT TCA AAAGCAGCCCGC         TGTTTTCTTCCTCTT  68 41
LQRI_RS13925 3213501 .. 3213547 -  -9.6  -5.40072   TTTTTCTCAAAAAAA TTGAGTTTTAGCCGGATTTT CCCTCTT AAATTCCGGCAAAAACTCAC ACATTATGTCAATTC 100 34
        rlmB 3212565 .. 3212577 -  -3.5  -4.64598   TAACTATTTTAAAAA                TTTTA TAT TAAAA                ATTTCTTTGCCTCCG  63 20
        sigH 3211563 .. 3211578 -  -2.6  -3.93236   TATTAATTTCACAAA              GCATAA GCTA TTATAC               CACTATCAATCAAAA  51 73
LQRI_RS13910 NONE
LQRI_RS13905 3211333 .. 3211366 -  -5.4   -5.7827   AACACAAATAAAAAA     TCCTCCAAACACTC CACACC AAGCATTTGAAGGA      CTCTAAACTGGAGCC  91 34
LQRI_RS13900 3210149 .. 3210159 -  -2.4  -4.81863   AAAGGCATAATAAAA                 GTGG AAA CCTC                 CAGTTGGAAGAACTG  63 304
       csx20 NONE
LQRI_RS13890 NONE
LQRI_RS13885 NONE
LQRI_RS13880 NONE
LQRI_RS13875 NONE
LQRI_RS13870 NONE
        csx7 NONE
        csx7 NONE
LQRI_RS13855 NONE
LQRI_RS13850 NONE
LQRI_RS13845 3197976 .. 3197990 -    -5  -3.25823   CTCTTTTTATATCAA               CTCTAA CAA TCAGAG               TTCTTTCTATGATTT  54 192
LQRI_RS13835 3197048 .. 3197068 -  -3.3  -3.89524   AGTCTAGCTTACAAA            CTCTTGCTG CAC CAACAAAAA            TACCACTGTCTTCTT  54 192
LQRI_RS15805 NONE
LQRI_RS13825 3194900 .. 3194914 - -11.4     -2.89   AGTTGTATAGAATTA               TGGGGC TCC GCCCCA               AACCCCGTCCTCACC  86 387
LQRI_RS13805 3191082 .. 3191108 -  -3.7  -4.88736   TAGCACCTATAAAAA        GGCCACATCAGC CTTA ACTG-CGTGACC         TTCAAATTGCTGTCA  66 104
LQRI_RS16345 3189782 .. 3189808 -  -3.7  -4.51174   TGACTATAAGTAAAA        GGTCACGTCAGC TTAA ACTGT-GTGACC         TCAAATAACCGGTTA  61 38
LQRI_RS13790 3189250 .. 3189265 -  -3.4  -2.79796   GTTTATTTTATCATA              TATTTT CTTA AAAATA               TTATACAGGTTTCCA  45 67
        addB NONE
        addA 3181916 .. 3181927 -    -3  -3.96148   GTTTTTTATCACAAA                TTTC GACA GAAA                 TAACAATTTGAATCA  55 63
LQRI_RS13775 3178792 .. 3178833 -  -3.7  -3.81141   GTTGACACAAAAAAT CTCCTCCTTGGATATTATT TTGT AATTCTTGCCAAGAAGGAG  TCTTTTCATTCTCTT  54 210
LQRI_RS13760 3176221 .. 3176235 -  -2.8  -2.72049   CATAGTTTTTAAGCA               GCTTAG CAT CCAAAC               CGCGCCATATTTTGC  40 199
LQRI_RS13755 NONE
LQRI_RS13750 3175395 .. 3175405 -    -4   -4.3534   TGGTAATCATTAAAA                 CAAA TTT TTTG                 TCGGAAAATTAATTT  62 333
LQRI_RS13745 NONE
LQRI_RS13740 NONE
LQRI_RS13735 3166726 .. 3166744 - -14.6  -3.28791   ACTGTCTCTTTAGAA             CCACTGGC ATA GCCAGTGG             TTTTCTTTAAACAAT 100 128
        tnpA 3166033 .. 3166051 -   -16  -3.56325   GCTTTATAATCATAA             CCACCGGC TCA GCCGGTGG             TTTGCTCTAGCCCTA 100 126
LQRI_RS13720 3163412 .. 3163438 -  -4.4  -5.35815   TATATTAAACAAAAA         GGTCACATTAGT TGA AATTACGTGACC         TGCAAATTCTCCCTA  81 110
LQRI_RS13710 3161563 .. 3161587 -  -9.3  -3.38699   TGGATAAAGAAGATA          GCCACACCA GCCGAAA CGGTGTGGC          CTTAAAAGATTTTCT  78 176
LQRI_RS16110 3160870 .. 3160912 -   -18  -4.27117   CTCCGAGAACATAAA TAGAGCCTGACAAATAGTTT TTA AGACTATCTGCCAGGCTCTA TAGGTGAGTCATTCG 100 77
LQRI_RS16325 3159941 .. 3159953 -  -6.3  -2.72511   CTTATCTCCTGAAAG                CTGAA TTA TTCAG                GCAATACGTAAATAC  57 466
LQRI_RS13690 NONE
LQRI_RS13685 3156444 .. 3156456 -  -2.7  -2.77899   TTTCGCCAGGAAGGA                GATTC CCA AAATC                AAACTATATATATCC  40 101
LQRI_RS13680 NONE
LQRI_RS13675 3155050 .. 3155082 - -15.8  -3.49182   ATATAGTATAATCAA     GGGGTTCAGGGAAAC TCTG GTTTCC-TGAACCCC      CCTGTAATATTTTAT 100 256
LQRI_RS13665 3152896 .. 3152932 -  -9.7  -3.28712   GTGGTTGCCTTATAA    TAATGCCAGGAAA CTTTTCTGCCT TTTCCTGGCATTA    TTATATTATTTCTAT  78 77
LQRI_RS13655 3150649 .. 3150661 -  -3.3  -5.56673   ATTGATAAGAAAAAA                GGCCA CGC CAGCC                GAAACTGTGTGACCT  79 131
LQRI_RS13650 NONE
LQRI_RS15890 3149956 .. 3149999 - -10.4  -4.41348   TCGTGCTGAAATAAA TTGAGCCCGACAAATAGTTT TTTA AGACTATCTGCCAGGCTCTA TAGGTGAGTCATTCG  95 77
LQRI_RS13645 3149055 .. 3149070 -  -7.6  -3.10878   AGGACCTGAATAAAG              CAGATC TTTT GATCTG               TGACGAATGGGGCTA  67 258
LQRI_RS13620 3145162 .. 3145172 -  -5.4  -2.92192   GGTGATTTAATCATA                 GAGA TAA TCTC                 CCTAACTATTTTTTT  53 86
LQRI_RS13615 3144204 .. 3144229 -  -9.1  -4.18494   CAGCTCCAGGCAAAA         CCCGCTAAA ACATTGAG TTTAGCGGG          TTTTGTGTTTTTCGG  88 81
LQRI_RS13580 3139864 .. 3139900 -  -6.1  -3.40403   GTGGTTGCATTATAA    TAATGCCAGGAAA CTTTTCTGCCT TTTCCTAGCATTA    TTATATTATTTCTAT  62 77
LQRI_RS13575 NONE
LQRI_RS13570 3137851 .. 3137863 -  -3.5  -3.63569   TCAACCTTTTAACAA                TAATA TTT TATTA                AATCAGCTCTAAGTT  52 6
LQRI_RS13565 3137036 .. 3137077 - -15.4  -4.64861   CGTGCTGAAAATAAA CAGAGCCTGACAAATAGT TTTTAG ACTATCTGCCAGGCTCTA  TAGGTGAGTCATTCG 100 208
LQRI_RS13560 3135857 .. 3135893 -  -9.7  -5.14965   ACCCTCAGTAAAAAA    TAATGCCAGGAAA CTTTTCTGCCT TTTCCTGGCATTA    TTATATTATTTCTAT 100 330
LQRI_RS13555 NONE
LQRI_RS13550 3133575 .. 3133598 - -10.4  -4.04806   GCTTATAGCAAAGAA          GCCACACAAT AAAA ATTGTGTGAC           CTTCACTTACTATCT  91 39
LQRI_RS13545 3132043 .. 3132082 - -12.5  -3.02043   AACCTTCCCCTAATA  GATTCACATATATGCAT CCATTT ATGTATATATGTGAATC   TTAACTGTAGAATTT  90 340
LQRI_RS13525 NONE
LQRI_RS13520 3128830 .. 3128877 -   -18   -3.0641   AAAAATTTTTTAACA TTATGCAGGAAGAGATCGGGCAC TGC ACGCCCGATCTCTTCCTGT-TAA TCTATATCTATTAAT 100 48
LQRI_RS13515 NONE
LQRI_RS13510 NONE
LQRI_RS13505 3126435 .. 3126461 - -10.3  -4.21812   GCGTACGGAAAACAA        GGTCACAGCAGT TGGA ACTG-TGTGACC         TCAGTATTTTATCTT  95 34
LQRI_RS13495 3125052 .. 3125066 -  -4.2  -2.94099   GTCTGTTATGACAGA               CCGG CTGCCTT CCGG               TGAGGACGGGGTTTG  47 59
LQRI_RS13490 NONE
LQRI_RS13485 NONE
LQRI_RS16105 3123546 .. 3123588 -   -18   -4.1891   CTCGCCGAATATAAA TAGAGCCTGACAAATAGTTT TTT AGACTATCTGCCAGGCTCTA TAGGTGAGTCATTCG 100 77
LQRI_RS16315 3123290 .. 3123303 -  -3.8  -3.14132   TTTCGCCTGTAGGAA               TGCC TATATT GGCA                TTGGTTGTTTTTCTC  48 51
LQRI_RS16305 3122368 .. 3122404 -  -9.7  -3.28712   GTGGTTGCCTTATAA    TAATGCCAGGAAA CTTTTCTGCCT TTTCCTGGCATTA    TTATATTATTTCTAT  78 330
LQRI_RS13475 NONE
LQRI_RS13465 3120007 .. 3120020 -  -2.5  -4.36089   CATTCCAAAAAAATA               TTTTT ATTT AAAAA                TTTCCTGAAATGTTT  58 343
LQRI_RS13460 3119134 .. 3119146 -  -2.7  -3.57144   CCTTGCACGTTTAAA                CTCAT TAA ATGAA                TTGTGATGGTTTTTT  48 136
LQRI_RS13455 NONE
LQRI_RS13450 3117250 .. 3117268 -  -3.3  -2.71924   TACCCCTCCTTAAAT             TAAAATT AATCA AATTTTA             TGCTTTCATTAAGCT  44 12
LQRI_RS13445 NONE
LQRI_RS13440 3116502 .. 3116533 - -16.8  -2.83082   AAAAATCCCATTATA      GCCCTAACCA-CACT CTC AGTGATGGTTAGGGC      CAATCCAATTTCCAC 100 70
LQRI_RS13435 NONE
LQRI_RS13430 NONE
LQRI_RS13425 NONE
LQRI_RS13420 NONE
LQRI_RS16100 3109510 .. 3109534 -  -2.3  -4.60041   ACCGATTTTCAAAAA          TTTTTTTCAAT AAG ATTAAAAATAA          AAATTCATCCTACCT  59 94
        ahpC NONE
        ahpF 3107233 .. 3107276 -  -6.9  -3.14229   ATACTTTCACCAATA GTTTGGACGGTTCCCTGTTTG ATAT CAAACAAAGAACCGTCCT--C TGTTAATTTCTTAAT  62 36
LQRI_RS13405 3104100 .. 3104157 - -15.1  -4.56775   ATTCTGCCGTAAAAA GAT-ATTCTGCCGTAAAGCCGGCTCTTA ATT CAGAAGCCGGCTTTACGGCATCATTATC TGCTCAGCTTTTCGG 100 46
LQRI_RS13390 3099060 .. 3099082 - -10.6  -5.34055   ACAAACATGAAAAAA           GAGATACCTC CAA GTGGTATCTC           CCGTTTTACAAAGTC 100 74
LQRI_RS13385 NONE
        uvsE NONE
LQRI_RS13375 3096668 .. 3096679 -    -3  -3.77219   AGCACTTAAGTCAAA                GAAA ATTT TTTC                 GTTTGCAATTCAATT  52 45
LQRI_RS13370 NONE
LQRI_RS13365 3094065 .. 3094085 -  -4.8   -5.2197   CATAAAAATTAAAAA           CCGGATTTA AATT TAAA-CCGG            TTTGAAAAGAAATAT  79 68
LQRI_RS13360 NONE
LQRI_RS13355 3090523 .. 3090551 -  -5.3   -4.1399   CGACGGACAGATAAA        CCTTGCACCCAAT GAA ACTGCGTACAAAG        CTGCAAAAGACGCGT  65 217
LQRI_RS13330 3087118 .. 3087138 -  -2.7  -3.71917   ATTGCAAATTTCAAA            TAATATTTA TGC TAAAAATTA            TATTATGTTAAAAAG  48 23
LQRI_RS13325 NONE
        trxB 3085136 .. 3085153 -  -2.7  -2.83249   TTTCATATAACATTA             TCGTAAT TTTC ATTACGC              AATTTTAATAGAATT  42 30
LQRI_RS13315 3083998 .. 3084018 - -11.1  -5.86976   TGATAAAATAAAAAA            CCCGGTGAC AAA GTCACAGGG            TCACAGACATAGTAT 100 218
LQRI_RS13310 3083232 .. 3083259 -  -4.3  -5.84432   GAGAATACAAAAAAA        TTGACATTATA TAAAGC TACAATGCCAA         TATTTTACCAACATA  87 158
        deoC NONE
LQRI_RS13300 3081362 .. 3081402 -  -6.2   -3.9777   CCCAATATTCATAAA TGCGGA-GGATGCTGCAGT CATT AATGCAGCACCCTTTCACA  TCGGCATTATATAAA  68 47
LQRI_RS13290 3080098 .. 3080127 -  -3.6  -2.87132   CCCTCCCTTGACAGA       GCCACACACCACC CCAAC GGTAGC-TATGGC       TCCAAACATATTGTG  45 146
        mgtE 3078646 .. 3078681 -  -9.9  -2.62515   AACGCCGGTATATTA    TAAGGCCTTCCTG CTTTTAGATT CAGGAAGACCTTA     CAAAACAGGCAACTC  77 85
LQRI_RS13280 NONE
        murI NONE
LQRI_RS13270 NONE
        argS 3073964 .. 3074009 - -14.3  -5.44721   ATTATTGTAAAAAAA CAAA-CTCCGGCCAAATTATTA TCA TAATTATCCGGCCGGAGCTTTG CAAAACAATTCCATA 100 48
LQRI_RS13260 3073185 .. 3073197 -  -6.3  -3.08312   AATTTATTCACCCAA                TGCAA ACA TTGCA                AAGTTATTGGCGGAA  59 1
LQRI_RS13255 3072309 .. 3072332 -  -5.3  -5.85011   TAAAAATTAAAAAAA          TTAGCCGTT CTTTAT ATCGGCTAA           TTTTAGGACATTTAT  91 143
LQRI_RS13250 3069244 .. 3069256 -  -4.9  -2.63783   AAAAGCCGGAAATAT                TATTC AAC GAATA                TAATATAGGCATCTC  50 12
LQRI_RS13245 NONE
LQRI_RS13240 3065930 .. 3065967 -  -6.5  -5.46657   TAGTTGAATAAAAAA  GAGGCCTGAA-AC-GCT CAACAC AACAGTCTTCAGGCCTC   TTGTATTATCTTTGA  88 117
LQRI_RS13235 3063998 .. 3064009 -  -5.8  -2.55544   TTACTAGTTAATTTA                GGCT TTTT AGCC                 ACCTCTTTAACATAT  54 40
LQRI_RS13230 3063027 .. 3063039 -  -4.9  -3.38201   TAATATCCTTAAAGA                TATCT TTT AGATA                TGCGCTTACATCAGC  56 205
LQRI_RS13215 3059286 .. 3059329 - -12.7   -3.3579   AAATTGCGTCAAATA CATTAAAATCGGCTG-TCCG ATTGA CGGAACAGCCGATTTTTATA TCATTCTTATCATTA 100 38
      spoIIR 3056627 .. 3056641 -  -6.4  -3.31232   TTGGGGATATAAAAG               TTCCGC TTT GCAGAA               GGAAGAAATGTCTTA  61 286
LQRI_RS13195 3055841 .. 3055851 -    -4  -2.82145   AAGCATGAAAAAAGT                 CAAA CAC TTTG                 TTAAATATTTTTTAG  47 71
LQRI_RS13190 3054291 .. 3054310 -  -2.2  -4.01158   AATCGGAGTAAACAA            TGATTG TAATCCGT CAATCA             ACACCAAGAACCATT  52 19
LQRI_RS13185 3051088 .. 3051106 -  -4.6  -4.24726   AGAATAAGTGTAAAA             GTAATGAA GTA TTCAATAC             TGTATTTTTTAGTAC  62 353
LQRI_RS13180 NONE
LQRI_RS13175 NONE
LQRI_RS13170 NONE
LQRI_RS13165 3045438 .. 3045454 -  -5.9  -3.04322   GTTAATTTTTTAACA              TTTGTCC ACT AGACAAA              AATATCACGATATAA  57 187
LQRI_RS13160 3043705 .. 3043739 - -10.8  -4.56978   TCTTTAAACAATAAA     GAAAGGATATCCGCCC TAT AAACGGTTATCCTTTC     TCTTCGGATAAAAAA 100 77
        tnpA 3042969 .. 3042998 - -11.5  -5.62219   AATAGATTAAAAAAA       TCATAACCACCGGC TCA GCCGGTGGTT-TGC       TCTAGCCCTATAAGG 100 121
LQRI_RS13150 3038806 .. 3038845 - -12.2  -4.23045   GAATTATTTAAGAAA  GGCCCCGCATATATCC ATTAATCA GGTTATACACGGGGCC   ATAAAACCTCCCTAA 100 47
LQRI_RS13145 NONE
LQRI_RS13140 NONE
LQRI_RS13135 3032751 .. 3032792 -  -3.7  -5.71712   GTTGACATAAAAAAA CTCCTCCTTGGATATTATT TTGT AATTCTTGCCAAGAAGGAG  ACTTTTCATTCTCTT  84 134
LQRI_RS13130 3030531 .. 3030541 -  -5.4  -2.97721   CAAAACTTTATAAAT                 TTGC AGA GCAA                 TTACATGTTTAATTA  53 81
LQRI_RS13125 NONE
LQRI_RS13120 3027889 .. 3027917 -  -3.2  -3.39749   TTAATAACTGCATAA        TCAATTCCCTTT TTTCT ACAGGTAATTGA        TTAATCCGCTCCTTT  48 125
LQRI_RS13115 NONE
LQRI_RS13110 3021591 .. 3021601 -    -4  -4.77925   AAAAAACGTCAAAAA                 GTTA CTC TAAC                 GGTATTGCACCAAAA  68 16
LQRI_RS13105 3020358 .. 3020390 - -15.8  -3.49182   ATATAGTATAATCAA     GGGGTTCAGGGAAAC TCTG GTTTCC-TGAACCCC      CCTGTAATATTTTAT 100 303
LQRI_RS13090 3017114 .. 3017128 -  -2.9  -4.07618   TGTGCAACAACTAAA               GTTTT TTTTC AAAAC               CAGTCAAATTAATAC  55 53
LQRI_RS13080 NONE
LQRI_RS13075 3015184 .. 3015218 - -16.2  -2.88249   TAGACCTCCTATATA     TAGATTATCTATATAT AAT ATATATAGATAATCTA     TATATGTCAATAACA 100 115
LQRI_RS13070 NONE
LQRI_RS13065 NONE
LQRI_RS13060 3013601 .. 3013624 -  -3.8  -2.83641   GAATTTATTATCAGA          GCCGTTTTCC CATA AGAAATCAGC           GGCAACGATAATACC  47 105
LQRI_RS13055 3012629 .. 3012640 -    -3  -4.10007   ATAATCTTTTTAAAA                TTTG TCAA CAAA                 ATTGAGTGTAACTGT  55 403
LQRI_RS13050 3010175 .. 3010205 - -12.8  -4.91573   AAAATATATTAAAAA       TGGCATGAACATCA AAA TAATGTTCATACCA       TTTTTAATCAAATTG 100 52
LQRI_RS13045 3008367 .. 3008381 -  -4.4  -3.76413   TTTTAAAACGCTAAA               TAAAAT ATA ATTTTA               AATATTTATTCTATT  56 354
        ugpC 2996299 .. 2996346 - -15.4  -4.62984   TTATTATACACAAAA TAAAATAAAAAAGGAAAGATTC AAAT AAATCTTTCCTTTTTTATTTTT ATATTTATTTCATTA 100 38
LQRI_RS12995 2995029 .. 2995054 -  -3.3  -4.27117   TGCCGATAAGACAAA         TAAGGACATTT CAAA ACAAGTCCTTA          CAGTTTCAAATACTA  58 52
        ftsE NONE
        ftsX NONE
LQRI_RS12980 2992081 .. 2992102 -  -9.5  -5.08255   ATTGTCAAAACAAAA           CTCGTACCT TAAA AAGTACGAG            CTTTACGTTTCATTT 100 74
LQRI_RS12975 2990564 .. 2990574 -  -2.6  -4.07568   TCGTTTCCGTTAAAA                 TTAA CCG TTAA                 CCTTAGTATGTGTAA  53 98
LQRI_RS12970 2990266 .. 2990296 - -15.7  -4.61527   AAAAGGCGTCAAAAA       CGGGATGTATTTT TACCT AAAATACATCCCG       CCGCAAAAGTCATTG 100 86
LQRI_RS12965 2989433 .. 2989446 -  -5.3  -4.09243   TACACTTTTTCAAAA               TAGGA CATA TCCTA                TCCCCCGTTCTTGCA  64 23
LQRI_RS12960 2989105 .. 2989123 -    -6  -2.55034   AAATTGTATAAAACT             TTGACAAG CAG CTTGTCAT             TCCTGGAACTCATAG  54 22
LQRI_RS12955 2988715 .. 2988736 - -14.5  -4.33151   TATTATAATTGAAAA           CCCCGGTAT TTCA ATACCGGGG            TATATGGCCGTCCTT 100 64
        hslO NONE
LQRI_RS12945 NONE
LQRI_RS12940 NONE
LQRI_RS12935 NONE
LQRI_RS12930 2987178 .. 2987209 - -13.2  -3.59979   GCGCCGTATTTGAAA      CTAAAGACTGGAAA ATAA CCTCCAGTCTTTAG       TTTTGAATTTGGAGC 100 35
LQRI_RS12925 2987045 .. 2987080 -  -8.5  -5.55695   TAACAATACAAAAAA    GCCTGACTTTTAACTT TTTAC AAGTTACA-GTCAGGC    TCCTTTCTTATTTGG 100 38
LQRI_RS12920 2985834 .. 2985869 - -12.2  -5.31158   GAAAAAAATTAAAAA    GCCTTAATC-CACATTT TTA AAATGTATGATTAAGGC    TTTTTAAGCCAGTTT 100 104
LQRI_RS12915 NONE
LQRI_RS12910 2983669 .. 2983681 -  -4.9  -4.08767   TGCACTCGTTTAAAA                TTTGT CCG ACAAA                ACTAGATGCCGCAGC  62 27
LQRI_RS12905 2981295 .. 2981327 -   -10   -5.4477   AAACTTTTAAAAAAA     GCCT--ATAGGGGGCG TGG CACCCCCTATTAAGGC     TTTTGAATCTGTACA 100 43
LQRI_RS12900 NONE
LQRI_RS12895 2979106 .. 2979117 -  -2.2  -3.81287   TATAGCACGATTAAA                TACC TTTT GGCA                 ATGTTATAAGAAATT  50 9
        metA NONE
LQRI_RS12885 NONE
LQRI_RS12880 NONE
LQRI_RS12875 NONE
        larE NONE
        cysK 2973792 .. 2973816 -  -9.3  -4.84918   GTGACAAATACAAAA          GCGATGGAATA TCA CATACCATCGC          TTTTACTTTTAATAC  93 104
LQRI_RS12855 2970213 .. 2970245 -  -5.6   -4.2828   GGTCATGTATTAAAA     GGGGGGCAACCTGGCC TTC AGCCA--TTGCCCCAC     TGAATTTTGTCACAA  66 90
LQRI_RS12850 2969403 .. 2969435 -   -10  -5.67063   TGCAGCATAAAAAAA      TCCCCAAAAGCTTT TATGC AAAGCTCCTGAGGA      TTTCATTCAGGCCGG 100 49
LQRI_RS12845 2968167 .. 2968185 -  -7.4  -6.18768   AAAACATAAAAAAAA             CGGAAGCC GAA AACTTCCG             TCATCTTCCCAAATC 100 93
LQRI_RS15885 NONE
LQRI_RS12835 2964471 .. 2964484 -  -2.4  -3.01924   TATTTTTCGTTAATA               TCCT TTATAC AGGA                CAACATCTAACTCTA  43 6
LQRI_RS12830 2963807 .. 2963826 -  -3.6  -2.79796   CTCCATTTTACTATA            GTCTTTAT TAAC ATAGAGAC             TGATAACCTTATTCT  45 34
LQRI_RS12825 NONE
LQRI_RS12820 NONE
LQRI_RS12815 2958849 .. 2958886 -  -6.6  -5.66229   ATTAATAATAAAAAA  CCTCTCAAC-AC-AAAAG GTAT CTTTTAGTCATTGAGAGG   TCTTAGAATCATTTT 100 76
LQRI_RS12810 2957375 .. 2957388 -  -3.1  -4.52047   CATTATAGTATAAAA               TAGCA AATA TGCCA                ATATGGTTTTTGTAA  60 127
LQRI_RS16300 NONE
LQRI_RS12800 2953271 .. 2953281 -    -4  -2.87132   TTTCCCTCCTACATA                 TATG TTA CATA                 CACAAAAGCTTTATT  47 36
LQRI_RS12795 2952292 .. 2952302 -  -2.6  -3.42395   TCTACCATTGAAACA                 TTTT TTT AAAA                 TTAAACGTCTCTGAA  46 1
LQRI_RS12790 2949159 .. 2949191 - -15.8  -3.49182   ATATAGTATAATCAA     GGGGTTCAGGGAAAC TCTG GTTTCC-TGAACCCC      CCTGTAATATTTTAT 100 296
LQRI_RS12780 2946562 .. 2946599 -  -6.6  -5.64873   TTTAATAATAAAAAA  CCTCTCAAC-AC-AAAAG TTAT CTTTTAGTCATTGAGAGG   TCTTAGAATCATTTT 100 76
LQRI_RS16295 NONE
LQRI_RS12770 NONE
LQRI_RS12765 2941422 .. 2941432 -  -2.6  -3.07043   TTTACCATTGGAACA                 TTTT GTT AAAA                 TTAAACGTTTTATAT  43 1
LQRI_RS16145 2940507 .. 2940539 - -15.8  -3.49182   ATATAGTATAATCAA     GGGGTTCAGGGAAAC TCTG GTTTCC-TGAACCCC      CCTGTAATATTTTAT 100 188
LQRI_RS12750 NONE
LQRI_RS12745 2935696 .. 2935733 -  -6.6  -5.64873   TTTAATAATAAAAAA  CCTCTCAAC-AC-AAAAG TTAT CTTTTAGTCATTGAGAGG   TCTTAGAATCATTTT 100 76
LQRI_RS12740 NONE
LQRI_RS12735 NONE
LQRI_RS16290 NONE
LQRI_RS12730 NONE
LQRI_RS12725 2932613 .. 2932623 -  -2.6  -2.98823   TGTTTTTTATATACA                 TAAA AGC TTTA                 TTCTTCTTTTTCAAA  43 23
LQRI_RS12720 2931562 .. 2931582 -  -5.5  -3.95911   AATATAAATTAATAA            TATATAGAG AGT CTCTTTATA            CATAATTTTGTCCTC  61 51
LQRI_RS12710 NONE
LQRI_RS12705 2925580 .. 2925626 - -11.1  -5.09259   GATTTTAAAACAAAA GGTGCTACAAACAACGCAC TAAATCACT GTGCATCATTTATAGCACC TATGCTATACTTCAT 100 284
        urtA NONE
        urtB NONE
        urtC NONE
        urtD NONE
        urtE 2920388 .. 2920403 -  -6.2  -3.99678   ATTGGCATAACCAAA              GGAAAA TTTA TTTTCC               CTGTCTAAAAATACT  68 130
        ureA NONE
        ureB NONE
        ureC 2917893 .. 2917909 -  -2.3   -2.7728   TTGAAATGTCAATTA              CCATAAA TTT TTTACAG              AGAAACTAACCTTCC  40 47
LQRI_RS12655 NONE
        ureG 2915974 .. 2915985 -  -4.4  -2.96711   TTCATAATTTACACA                CCTT CCAA AAGG                 ACGCTTTTCTTAATC  49 7
LQRI_RS12645 2915133 .. 2915157 -  -5.1  -3.91908   ATACTGCCAAAAACA          TTTAGTTCTGA TTT TCATAACCAAA          AATAGTGTTTATTTT  60 43
LQRI_RS12640 NONE
LQRI_RS12635 2912164 .. 2912209 - -14.2  -5.08731   CAACAAACAATAAAA TACCCCCATTTATCGGCGAT ATTTAA ATCACCGATAAATGGAGGCT TTATTACACAATTAA 100 57
LQRI_RS12630 NONE
LQRI_RS12625 2909680 .. 2909703 -  -9.7  -5.31275   TTGTATGATAAAAAA          GAAGAGAGT TAACCG ACTCTCTTC           CTATGAAGCCCTTCG 100 114
LQRI_RS12610 2901178 .. 2901200 -  -6.9  -5.64421   AGGCCAAACAAAAAA           GCGGCGGCC TTCAC AACCACCGC           TTTTTTACAGCCAAT 100 72
LQRI_RS12605 2900054 .. 2900070 -  -2.3  -2.87344   CAGGTTGGCCATATA              CTATTTA ATT TAAAAAG              CCGCTGTCTTTTACG  41 46
        cwlD 2898993 .. 2899028 - -10.7   -4.4595   TCATAAAATTTAAAA    CCCAAAAAG-GACTAT TTCAT ATAGCCTCTTTTTGGG    TTCATCCCAATTTAA  95 248
LQRI_RS12595 2897871 .. 2897889 -  -4.4  -4.72029   CCCAACTGAACAAAA             GCTGGGTT TTT AGCCCTGC             CTTTTTTATTTTATT  68 40
        cbiQ NONE
LQRI_RS12585 2896241 .. 2896254 -  -2.5    -4.183   GGAAGTTTTAAGAAA               TTAAA TTAT TTTAA                TAAATTTACCTCCAT  55 41
LQRI_RS16080 2894260 .. 2894270 -  -5.4  -3.45653   AACCAATCCAAAAAT                 GTCA AAA TGAC                 GGCATCAAAAATGGA  58 315
LQRI_RS12570 2891644 .. 2891667 -  -2.4  -5.20333   TACCGATAATAAAAA          CCGGAC GCTGCAAATATT GTCCGG           TTTTTTATATTTACA  69 73
        fusA 2885413 .. 2885437 -  -7.9  -4.71061   ACTCAGATTCAAAAA          GGGTACGGT CTTTATT ACCATACCC          TTTTTCGCGGCAAAT  82 65
LQRI_RS12545 NONE
LQRI_RS16275 2884558 .. 2884568 -  -6.8  -3.53811   GTTATTTTTGCCAAA                 GGCA CCA TGCC                 ATATTCATGCAAAAA  65 30
LQRI_RS12535 NONE
LQRI_RS12530 NONE
LQRI_RS12525 NONE
LQRI_RS12520 2879632 .. 2879659 -  -8.5   -5.9003   AAAGCAATAAAAAAA        GAGCCAAAGGA ATTGCG TCCTCTGACTC         TTTTCCTCTTAGCCC 100 34
LQRI_RS12510 NONE
        radA NONE
        disA 2873531 .. 2873562 - -10.2  -4.42325   AGATAGATAAAACAA      GAGCCATTACTTCT AAAA AGCAGTATTGGCTC       TTTTCATTTGCTCTG  93 87
        rplM NONE
        rpsI 2871791 .. 2871818 -  -4.8  -5.71712   TTGCACACAAAAAAA        CCGCCAAAGG GATTTAAA CCTATGACGG         CTGTATGCTTGTAAT  90 91
LQRI_RS12480 2871093 .. 2871103 -  -2.4  -4.99134   ATTTTAAATTAAAAA                 GGGC ACT GCTC                 CCAAAATTTATTCCA  66 261
LQRI_RS12475 NONE
LQRI_RS12470 2869921 .. 2869938 -  -5.6  -3.15427   AATATTTGGCATCAA             CTGGTT GCACCA AACCAG              GCGATTCGTAACACA  54 65
LQRI_RS12465 2868261 .. 2868299 -    -4  -2.72855   TAAATTTGCCAATTA   TCATTGTCAGTTACAATT GTC AATTATCACTGCCAATTA   TCCGGCAGCATCAAA  46 69
LQRI_RS12460 NONE
        tsaE NONE
        tsaB NONE
        rimI 2865024 .. 2865034 -  -2.6  -3.32769   TTTTGAAACGACTAA                 TATT TCA AATA                 TAGACCATCGTCACT  44 187
LQRI_RS12440 2862391 .. 2862403 -  -5.5  -3.61356   ACGATGCAGGTGAAA                GCCTG GAA CAAGC                TTATGGACAACATCT  59 92
LQRI_RS12435 2861218 .. 2861236 -    -4  -5.33866   GAAATGTATAAAAAA             TTCTAAAA AAC TTTTAAAA             TTCCCTATTGCAAAT  77 316
LQRI_RS12420 2859952 .. 2859966 -  -5.7  -4.04927   TCAAGCATGAAATAA               GGGAT ATAAA ATCCC               AGAACAAAATACATA  65 136
LQRI_RS12410 NONE
LQRI_RS12405 2857656 .. 2857675 -  -4.9  -5.36441   GGTGTATATAAAAAA            GCCGCCC GGCTCA AGGCAGC             TTTTTTATATAAATT  82 66
        proB 2856621 .. 2856634 -  -3.9  -3.28924   TATCCCTCCCCATAA               GAAAT ACGA ATTTC                TATATCAAGAGTCTG  49 30
LQRI_RS12395 2855426 .. 2855445 -    -7  -3.02144   CCACCCTTTCTAATA            CGCCGGAC CCAA GCCCGCCG             CCTCTTCAAGCTTCA  62 0
LQRI_RS12390 2854162 .. 2854175 -  -8.1  -4.20086   ACATATACAGATAAA               CACCC TTTT GGGTG                CTTAACAACAATAAA  83 167
LQRI_RS12385 NONE
LQRI_RS12380 NONE
LQRI_RS12375 2850626 .. 2850650 -  -7.2  -4.67234   ACCCAATTGTAAAAA          GCTCTGGA TTTAAAGTG TCCAGAGC          TTTTTGGCATTCACT  80 248
        yunB 2846750 .. 2846765 -  -6.8  -3.39142   TCGAGACGGAAGGAA              CCGTCA GAAT CGACGG               AAAGATTAAGGGGAA  62 486
LQRI_RS12350 2843777 .. 2843806 -  -9.4   -4.0014   ATCACAAAAAATTAA       GCCTCCTAACCT ACGCAG AGATTAAGAGGC        TGCTGTTCGTTTGCA  86 361
LQRI_RS12345 2842696 .. 2842706 -    -4  -3.39216   GTTTCATTTAAAAAC                 TTCA GGA TGAA                 TTATTTTAGCAAGTT  51 3
LQRI_RS12340 NONE
LQRI_RS12335 2840727 .. 2840740 -  -2.3  -6.09133   TACGGCAAAAAAAAA               GCCCT GTTG AGGGA                CAAGAATTTGAATCA  81 106
        rlmD 2838829 .. 2838845 -  -6.6  -4.40132   ACGAAGCAGAAGAAA              TATGGC ATAAA GCCATA              CATAGGTTTGAAAGT  76 326
LQRI_RS12320 NONE
LQRI_RS12315 2836605 .. 2836617 -  -4.9  -3.96291   TAGAAAGGTGATAAA                TTTTC ACA GAAAA                ATAAGGGAGTATTTT  62 124
LQRI_RS12310 2835826 .. 2835848 -  -2.6  -3.77177   ATGAATATATTGAAA           GAACTAACTG TCG CAGGAAGCTC           CTATCGGCTGAATAA  51 281
LQRI_RS12305 NONE
LQRI_RS12300 2834701 .. 2834715 -  -3.6  -3.50832   TTCTAAACCTAAATA               CATCAT AAA ATGATA               AACTCAGCTAACTTA  50 56
LQRI_RS12295 2833525 .. 2833554 - -14.5  -2.99859   ATTTAAAAAAAGGCA       CCACCCACTAAAA CGCT TTTTAATGGGTGG        AATTTTCTCTTACAA 100 247
LQRI_RS12290 NONE
LQRI_RS12285 2831361 .. 2831375 -  -4.2  -2.94416   GACCCGGACCAGAGA               CTTTGC TCT GCTAAG               AAGCGCCGGGATGAC  47 327
LQRI_RS12270 2826094 .. 2826108 -  -4.2  -2.93393   GGGCATCTCATAAAT               CCGCTT CCC AAGCGC               TTTTCAGGATTTTGT  47 234
LQRI_RS12265 2825641 .. 2825658 -  -4.9  -5.03314   CGCACCTCCAAAAAA             TCAAGAT AAAA ACCTTGA              TCTTTGAAGCAGTGT  75 97
LQRI_RS12260 2824707 .. 2824733 -  -8.7  -5.61596   ACGGGTATAAAAAAA         GCCCTCACAGG TTCAT CCCATGAAGGC         TTATCTATAATTTTT 100 460
LQRI_RS12250 2824227 .. 2824242 -  -3.9  -4.89063   TCATGTAAAAATAAA              CAGGG GATATA CCCCG               TTTGAAACTGCGATT  68 100
LQRI_RS12245 2823646 .. 2823664 -  -2.4  -2.74144   TTTGTATGTTCAAAT             CAACCA CCCCTCC TGGCTG             TCAGGAGTTTTTCCA  40 6
LQRI_RS12240 NONE
LQRI_RS12235 2821023 .. 2821044 -  -4.4  -3.74397   ATTCCCATAAAAAAT           CCCACC TTTCCTTTTT GGTGGG            GTACATTAACGCTCT  56 67
LQRI_RS12230 2820261 .. 2820298 -  -8.6  -4.06687   ATGCTTGACAAAGAA   GGCGGTGCTATGAAAAT CATTC ATTCTCATC-CACCGCC   TTTGCTCTGCCTTTC  82 4
LQRI_RS12225 NONE
LQRI_RS12220 2819648 .. 2819668 -  -3.9  -3.69483   AGGCCATTGAAAACA            CAGGATAGC AAG GCAATTCTG            CATGAGTTTCCGCTG  53 79
LQRI_RS12215 2818649 .. 2818666 - -14.1  -2.56596   GTGTTTACCAAGGCA             GGGGCGG CTCT CCGCCCC              CAGAGCCCGGTTATC 100 40
LQRI_RS12210 NONE
LQRI_RS12205 2817889 .. 2817910 -  -7.3   -5.5112   TTGAGCAAGAAAAAA           GGAACCTCA TGGA CGAAGTTCC            TCTCATTAGTGGATT 100 68
LQRI_RS12200 NONE
LQRI_RS12195 NONE
LQRI_RS12190 NONE
LQRI_RS12185 NONE
LQRI_RS12180 NONE
LQRI_RS12175 NONE
LQRI_RS12170 NONE
LQRI_RS12165 NONE
LQRI_RS12160 NONE
LQRI_RS12155 2809562 .. 2809594 -   -15  -4.66537   TGCCGTAATATAAAA      GCCGAGTGAACAAT TCCTC ATCGCTCACTCGGC      CGGTGTGTTTTTTAA 100 17
LQRI_RS12150 NONE
LQRI_RS12145 NONE
LQRI_RS12140 NONE
LQRI_RS12135 NONE
LQRI_RS12130 NONE
LQRI_RS12125 2803086 .. 2803096 -  -2.4  -3.32562   AGAAATCCCTCACAA                 CCGG TCA CCGC                 CTTCCTGCATCTCCT  44 9
LQRI_RS12120 2800571 .. 2800594 -  -8.8  -5.36441   TTTGCATATAAAAAA          GCGCCCTGCC TTAA AGCAAAGCGC           TGAAAATTAAAACTT 100 46
LQRI_RS12115 NONE
LQRI_RS12110 2799073 .. 2799106 -  -7.4  -3.87075   AGCACCTCCTATAAA     GACTTAGGACAGCC GCGATT GGCTGTCCTTTATC      GTTATTCCGGCAATT  72 27
LQRI_RS12105 NONE
LQRI_RS12100 NONE
LQRI_RS12095 NONE
LQRI_RS12090 2795167 .. 2795205 -   -19  -4.84146   ATTATATAAAATAAA   CGCCGCCAATTAAGAAGG TTT CCTCCTCAACTGGCGGCA   ATCTTATTACAATCC 100 40
LQRI_RS12085 2793972 .. 2793982 -    -4  -2.87881   TAATTGCCTTACATA                 TTCT TAC AGAA                 CACTGTTTTAAGCAG  47 33
LQRI_RS12080 NONE
LQRI_RS12075 NONE
LQRI_RS12070 NONE
LQRI_RS12065 NONE
LQRI_RS12060 NONE
LQRI_RS12050 2788499 .. 2788513 -  -4.2  -2.94099   GTCTGTTATGACAGA               CCGG CTGCCTT CCGG               TGAGGACGGGGTTTG  47 59
LQRI_RS12040 NONE
LQRI_RS12035 NONE
LQRI_RS12030 NONE
LQRI_RS12025 NONE
LQRI_RS12020 2777415 .. 2777431 -  -4.5  -3.22102   ACACTTTTCAGAATA              TATTTTC CTG GAAAACA              GTTTTTTAAATCCAA  52 231
LQRI_RS12005 NONE
LQRI_RS16405 2773281 .. 2773297 -  -5.1  -3.23899   CTTTAATCAATGTAA              CAGTTTC CAT GAAGCTG              ACAGACTCATTAAAC  53 462
LQRI_RS11990 2769214 .. 2769226 -  -3.3  -2.72856   TAGTAAAATACTAAG                GGCCA CTT TTGCC                TGTCACGCCATGAGT  44 112
LQRI_RS11985 NONE
LQRI_RS11980 2766356 .. 2766407 - -18.7  -3.64685   AAAATGTCCCAATAA TG-CAAATAACAATATATTATAGC TTTCC GCTATAATATATTGTTATTTGACA ATAGCCGTTTAACTA 100 38
LQRI_RS11975 NONE
LQRI_RS11970 2763761 .. 2763795 - -11.5  -2.63902   ATAACAAGGAACCGA     TTAGGAGGTAGCTGA TTATT TCAGCTACCTCCTGT     AAAAAAGTGACTGCC  86 43
LQRI_RS11920 2752947 .. 2752967 - -11.8   -5.2853   GAGCCAAAAACAAAA            GCCACCGG GACAT CCGGCGGC            AAAATAAGAATGAAT 100 46
LQRI_RS11835 NONE
LQRI_RS11830 NONE
LQRI_RS11825 NONE
LQRI_RS11820 NONE
LQRI_RS16400 2733345 .. 2733383 -  -4.1  -5.51046   TAAATACACAAAAAA   GAAAGGATATATTGT TATATACAC ATAATACATCCTTTC   CTTCGCTTTTACTTC  77 43
LQRI_RS11815 2732373 .. 2732383 -  -2.6   -3.4934   CATAGTAAACACCAA                 TTAT TCC ATAA                 TTATAATAATCACCG  46 97
LQRI_RS11810 2731782 .. 2731792 -  -5.4  -2.89632   GCCAAAAACACACCA                 CAGA ACG TCTG                 CTACTTTAAGGATTT  53 46
LQRI_RS15875 2730571 .. 2730587 -  -2.3  -3.69449   CAATACTTTAAAATA              TCGAA CCTATTT TTCGA              GTCCAGTCAACCGGA  47 120
LQRI_RS11795 2729660 .. 2729671 -  -4.4  -2.54166   TGGGTAATTAAAATT                GCTT AGTG AAGC                 TGTTTGGCACTAATT  48 128
LQRI_RS11790 2728515 .. 2728530 -  -4.8  -4.04023   ATTAAGTAAGAACAA              GAATTT TAAC AAATTC               TTTATAACTTACAAT  63 314
LQRI_RS11780 NONE
LQRI_RS16075 2726326 .. 2726344 -  -8.8  -3.57783   CGACGACAATGACAA             CCGGTAGT ATC ACAACCGG             TGCATCGCATATCCC  77 155
LQRI_RS11770 2724747 .. 2724783 - -16.8  -5.63645   CGAAAATATAAAAAA   GCTGCTCGCCC-GAAAT AGAA ATTTCAGGGCGAACAGC    ATTATTGTCCGCGGT 100 324
        aspS NONE
LQRI_RS11760 NONE
        gatA NONE
        gatB 2719303 .. 2719329 - -13.1   -5.1615   CGAATACGCAAAAAA         GGCGTTCCACA GTCAA TGTGAAACGCC         TTTGTTTCTGTTAAA 100 407
LQRI_RS11745 2716996 .. 2717050 - -16.2  -3.21218   ACCTTTCAGTATTAA TATAAAAAAAGCCACCCCAAAAATCT TAC AAATTTTTGAGGTGGTTTTCTCTATA TTGTGTGCGGAACAA 100 70
LQRI_RS11740 NONE
LQRI_RS11735 NONE
LQRI_RS11730 NONE
LQRI_RS11725 2713326 .. 2713337 -    -3  -4.69868   ATAGAACAAAAATAA                GTTT TCGG AAAC                 TGGGGGACATATATT  62 511
LQRI_RS11720 2711573 .. 2711587 -  -4.2  -2.68487   GCAACCACGACAGCA               CCTGTT ATG ATCAGG               TATCCATAACCGCTT  46 148
LQRI_RS11715 2710325 .. 2710361 - -13.1  -4.13816   TTTATAAAAAGATAA    GAGACGCAAACCCTTAA ATT TCAAGGTTTAGCGTCTC    TTTTACGCTCTATAA 100 276
LQRI_RS11710 2709731 .. 2709742 -  -2.2  -3.79445   AATCATCAATGCAAA                CAGC TGTT ACTG                 TCTTTTTGTCAACAA  50 34
LQRI_RS11705 NONE
LQRI_RS16265 NONE
LQRI_RS11695 NONE
LQRI_RS11690 2706519 .. 2706542 -  -6.1  -4.79352   GGATTCATAATAAAA          TTCTCTCCT AAATAA AAGAGAGAA           TTTATTCTTCTACTT  80 102
LQRI_RS11685 2705732 .. 2705743 -  -2.2  -3.78067   AACAGCCAATTTAAA                TGAG TTCA CCCA                 CGCCACCTCCCATAG  50 9
LQRI_RS11680 2703853 .. 2703881 - -11.1  -5.11613   ATATCATCCAAAAAA        TCAGGCTTGATTC GGT AATTCAAGCCTGA        TTTCTTACAACATTA 100 16
LQRI_RS11675 2702501 .. 2702543 - -17.3  -5.40072   CGGTCTGCAAAAAAA TAGAAGCCATTACTTCCGTG TAAC CACGGAAGTAATGGCT-CTT CAATTCCACTTTTAT 100 37
LQRI_RS11665 NONE
LQRI_RS11660 NONE
LQRI_RS11655 2698087 .. 2698097 -  -2.6  -3.42395   GTTACCATCGAAACA                 TTTT GTC AAAA                 TTAAACGTTTCATAT  46 1
LQRI_RS11645 NONE
LQRI_RS11640 2696449 .. 2696462 -  -5.9  -3.14522   TTAAGGCAGATTGAA               GCCCG TCAG CAGGC                CCCGGACCATCCCAT  54 112
LQRI_RS11620 2692263 .. 2692281 -  -6.7   -4.7889   ACAAATATGCAAAAA             GCACACC TCTTC GATGTGC             TACGATATTTACAGT  83 337
        rsgA 2690971 .. 2690985 -  -4.2  -2.65504   TTGTCAGCAAAAATT               CTGTGA AAC TCTCAG               TCGTCTCCAAATTCA  46 120
LQRI_RS11610 2690437 .. 2690471 -  -5.7  -2.93891   ATGTTTAAAATATGA     GGCAGGGGACG GTTCCGAGTTCTA TGTCCCCTGCC     TTTTTGCTTATGCCC  56 53
LQRI_RS11600 NONE
LQRI_RS11595 2687144 .. 2687155 -  -4.4  -2.61873   ATCAGCCTGAAATAC                CCAT CTTT ATGG                 TTCTTTTCAAGATGT  48 107
LQRI_RS11590 2686202 .. 2686219 -  -4.1  -2.89565   AAGGTCAGATAATTA             TTTCGGC ATGA GCGGAAA              GCAACCAGCAAAACA  47 49
LQRI_RS11585 2685397 .. 2685410 -  -5.3  -3.26649   ACATCTCTACATCAA               CCAAA CATC TTTGG                GCTGCCGAGCATTAC  56 37
LQRI_RS11580 2683863 .. 2683885 -  -3.3  -5.44198   AATAAATAATAAAAA           CCCGAGGTT ATTGA ATCCCCGAG           TTTTCGTAAGCACTT  76 54
LQRI_RS11575 2682649 .. 2682661 -  -4.7  -4.07568   TTGGTTTTCCGAAAA                CCGCC TTT GCCGG                CTATTATGCTGCCAT  62 65
LQRI_RS11570 2681914 .. 2681925 -    -3    -3.182   ATACAAACCACCGAA                GATT GTTA AATC                 CAAACATTCTAAAAT  46 113
LQRI_RS15700 2681622 .. 2681638 -  -2.3  -5.63645   TGAAAATATAAAAAA              CTGTTTA CTG TAAAGAG              GATCATATCTTATGG  74 90
LQRI_RS11565 2680056 .. 2680069 -  -6.7  -3.02043   AATCTCCTTCCAATA               CTCTC GCCA GAGAG                CTTAAAAAAAGCGGT  62 295
LQRI_RS11560 2679046 .. 2679062 -  -2.3  -3.32293   CTAAAGTCAAACATA              TTCTG AAGAAAG CAGAA              ATATTCTTGATTTTG  44 57
LQRI_RS11545 NONE
LQRI_RS11540 NONE
LQRI_RS11535 2673201 .. 2673253 - -11.4  -5.41359   AATGAAAGCAAAAAA CATTTAAGCAGGGAACATAACAGG CCAAC CCTAATATGTTCCCTGCTTTTTTG CTGTGTTATTATTCC 100 55
LQRI_RS11525 2668515 .. 2668542 - -13.6  -3.22841   AATCAGAATATGCAA        TTAAGGGATGGA GAAT TCCATCCCTCAA         ACGTAATAAATTTTA 100 74
LQRI_RS11520 NONE
LQRI_RS11515 2667002 .. 2667043 - -13.9  -4.68456   ATTACCAAAAAACAA TTGAGCTTTATCGAGAAAG AACT CATTCTCGAAAAAGCCCAA  AAATACGCCACATTC 100 70
LQRI_RS11510 2666439 .. 2666480 - -14.1  -2.83343   ATATTTATCACCACA TATTCCACTTGTATAATAT TATT ATATTCCACAAGTGGAATA  TTGTCAATATATAAC 100 68
LQRI_RS11505 NONE
LQRI_RS11500 2664079 .. 2664111 - -13.7  -2.87344   TAGTGTGGCTATATA      GTTCAACTATATAGT ATA ACTGTATAGTTGAAC      TATATAGTTATATTA 100 178
LQRI_RS11495 NONE
LQRI_RS11490 2662960 .. 2662996 -  -3.9   -5.5074   CAATTTAACAAAAAA    TAATAATCAGACACA ACATTAG CATGCCTGACTATTA    TTTGACATATATTCA  77 136
LQRI_RS11480 2660292 .. 2660305 -  -5.3  -5.64421   AGGCTAAATAAAAAA               GATGA ATAC TCATC                TTTTTCGTTTTAGCC  87 114
LQRI_RS11475 NONE
        mutT NONE
LQRI_RS11465 NONE
LQRI_RS11460 2656873 .. 2656912 - -13.8  -4.31835   AATTTTCATAACAAA  TTAGTCAGTACTGACTAC AATT GTAACCCGTACTGACTAA   TTGTCAAGAATTTCA 100 110
LQRI_RS11455 NONE
LQRI_RS11450 2654831 .. 2654888 - -21.9  -3.57462   TATGGTATCTTGAAA CATATGTAAGAATGGGTATTCTTTTCAG TAC CTGAAAAGAATACCCATTCTT-CACATT ACAACCTTCCCATAT 100 24
         dcd 2648033 .. 2648047 -  -2.8  -2.82895   GGCCGCAGGAATAAG               CCAATG CTT CATTTG               ACTTCATAATCCAGG  42 19
LQRI_RS11420 2647698 .. 2647720 - -10.8  -3.24633   ATAGACTTCATAACA           TTAGTCTATA TCA TATAGACTAA           TTTGTCAATTATGAT  85 113
LQRI_RS11415 2646415 .. 2646440 -  -2.5  -3.87149   TCTACTAAATCCAAA         CGCTCTGCCAA ATCC CTTGCAAAGCA          TCTCTTCAATCTTGG  51 315
LQRI_RS16260 2645580 .. 2645592 -  -3.5  -3.40403   TTGTTTTCATCAGAA                TTTTA CCT TAAAA                ATTTTTTTGATATTT  50 276
LQRI_RS11400 2644838 .. 2644877 - -10.2  -3.69408   AAAGAAAGGAGACAA  CATACAGGCAATCCTGCTT TAT AAGCATT-TTGCCTGTATG  AAATTCACAAAAGCT  86 4
LQRI_RS11375 2638212 .. 2638224 -  -3.4  -3.88232   CTTCTTATATAATAA                CATC GGAAA GATG                ACAACAGTGTGTCAT  54 42
LQRI_RS11370 2637500 .. 2637510 -  -6.8  -4.16279   CATATCATTTTAAAA                 CTGC GTG GCAG                 TCCCTTTGGAATGCT  74 92
LQRI_RS11365 NONE
LQRI_RS11360 NONE
LQRI_RS11355 2635921 .. 2635931 -  -2.6  -3.76402   ATTTCATTCATCAAA                 TAAA TTT TTTA                 CCTAGTTCTTTTTCA  48 10
LQRI_RS11350 2635293 .. 2635329 - -13.9  -4.18702   ACAATTTTTAACAAA    TCGGCAGAGAAAGGT TGTTAAT ACCTTTTTCTGCCGA    TTGTATTCTTATTTA 100 272
LQRI_RS11340 2632950 .. 2632960 -  -2.6  -3.79113   ATCCTTGCATAATAA                 TTTA AAA TAAA                 AGCTATAGTGTTTGT  51 183
LQRI_RS16250 NONE
LQRI_RS11330 2631488 .. 2631502 -  -2.9  -4.13767   TTTGTCAGTCTAAAA               TGAAA TGTTT TTTCA               CGTTTATATTTCATT  55 232
LQRI_RS16240 2630272 .. 2630290 -  -4.6  -3.30124   CTGTAGCCTTCATAA             GAAAACAT CAA AAGTTTTC             TGCGTGTTGATATTA  52 38
LQRI_RS11315 NONE
LQRI_RS11310 2625102 .. 2625122 -  -4.1  -3.25088   CCGCAAATGTATCAA            TATTGTGTT ACT AACAAAATA            TGCCTGTAATTTAGA  49 121
LQRI_RS11305 NONE
LQRI_RS11300 2624198 .. 2624208 -  -3.2  -3.08015   GCAAGCATTCCAATA                 GCAA CAC CTGC                 TACTATGAAAACATT  45 28
LQRI_RS11295 2623446 .. 2623460 -  -3.6  -3.63425   TATCCAAACGAAATA               TAACCA ATT TGATTA               GAATAATCATTATAA  52 353
LQRI_RS11290 2620969 .. 2621005 - -10.3  -5.14819   AAAGTAAAAAATAAA    TAAGCTTCGGCAAGA AGTGTAA TCATGCCAAAGCTTA    TTATTTAATATAAAA 100 68
LQRI_RS11285 2620141 .. 2620179 -    -4  -4.28651   ACTAAAACTTTAAAA  GGCAAAGAACACCAGTGA TAATC TC-CCAGCGT-CTTTGCC  TTTATAATCTTTTTA  60 51
LQRI_RS11280 NONE
LQRI_RS11275 NONE
LQRI_RS11270 2617026 .. 2617063 -  -8.5  -3.59937   ATCAAACAATAAAAT   CAGGCTGGGAAACTTTC TTGC AAAAAATCCCCAACCTG    CTGTCATTTGCCGAC  77 64
        bioB NONE
        bioD NONE
        bioF NONE
LQRI_RS11250 NONE
        bioC NONE
        bioA 2611038 .. 2611057 -  -2.3  -4.08394   ATACCCCTGTCAAAA            TATAATT TCAAAT AATTATA             TCAGGTTATAACCTT  52 40
LQRI_RS16360 NONE
LQRI_RS11235 NONE
LQRI_RS11230 2609878 .. 2609908 -  -4.1  -3.54459   CGAACCTTCGGGAAA       CGTTGCTTTAATA CAGTC TATTATATCAACG       TCATCCAATAATTCC  51 195
LQRI_RS16395 NONE
LQRI_RS11215 2608636 .. 2608648 -  -4.1  -5.66229   AGGAACAACAAAAAA                GATGA ACC TCACC                TTAACAAACATGCCA  85 490
LQRI_RS11205 2606806 .. 2606852 - -13.6  -3.44279   AATATCTAAAATACA GAAAAGTACCTTTA-AAATTT ATACCA AAATTTCTAAAGGTACTTTTC TTTTTTCTTCACAGG 100 11
LQRI_RS11195 2601583 .. 2601593 -    -4  -4.18018   TCGCCTGATTCAAAA                 TATG CTG CATA                 TTACTGCGATGAAAA  61 396
LQRI_RS11185 2600354 .. 2600366 -  -6.3  -4.07133   TAGGTCTATAAATAA                GGTTT ATA AAACC                GTTTATTCAAGGATT  68 28
         hcp 2598616 .. 2598656 - -14.2  -2.81187   AAATATTGCACTATA CTGTACAAAGGGCCAATCA TTGC CGATTGGCCCTTTGT-CTG  TTATTCCATGCTTTA 100 50
LQRI_RS11170 NONE
LQRI_RS11165 2594858 .. 2594883 -  -9.8  -5.82172   ATCAATATAAAAAAA         CAGAGTGAAC ACTAAA GTCCACTCTG          CTTTATGTATTAACT 100 51
LQRI_RS11160 NONE
LQRI_RS11155 2591695 .. 2591722 -  -9.3   -5.0538   TGGTATTTTAAAAAA        GCAGAGTAAAT GTCAAA ATTCACTCTGC         TTTACGTATTTTTAT  95 52
LQRI_RS11150 2588443 .. 2588453 -    -4  -3.93719   AGAATCACATAAGAA                 TTCT GGA AGAA                 GCTGAATTTTGGAAA  57 414
        hydF 2586722 .. 2586736 -  -4.2  -2.96792   AAATATACAAAATAT               GGAATC TTC GTTTCC               GGATGTTTGCAGAAA  47 268
LQRI_RS11135 2584300 .. 2584328 -   -14  -5.20333   CAGGCATAACAAAAA        TCCTACGGATGA CCATT CCATCCGTAGGA        TTTTTTCTGCAACAC 100 61
LQRI_RS11125 NONE
LQRI_RS11120 2578629 .. 2578677 -  -7.6  -5.17507   AAAAGCTAACAAAAA CCGTGTC-CCCTGAAAACTAAGT GCAA ACACACTTTTCAGGATAACACGG TCAGTTGTTATTTTT  91 78
LQRI_RS11115 NONE
LQRI_RS11110 NONE
LQRI_RS11105 2576108 .. 2576118 -  -5.4  -2.67925   ACTTTACAGCATAAT                 TTCG ATT CGAA                 TCAATCTTCCCAGGA  52 3
LQRI_RS11100 2574756 .. 2574786 -  -8.4    -5.055   CGAATTGCGAAAAAA       GAAGTCAACAAGAA TCA CTCCTGTCAACTTC       TTTTTAATTTTCTCC  91 75
LQRI_RS11095 2573373 .. 2573383 -  -2.6  -4.42047   ACGAAAAAATAACAA                 TAAA AGT TTTA                 TTTATTTTAAAATTA  58 38
LQRI_RS11090 2571850 .. 2571883 - -10.5  -5.86465   AAGAAGATAAAAAAA     CAGATAGCAAATGAA AAAA TCCATTTGCTATCCA      CAATAATAACACAAT 100 78
LQRI_RS11085 2569214 .. 2569249 -  -7.7  -4.59944   ATCAGTACAAATAAA    GGAGTGCCGCAAAACC AATTA AG-TTTGCAACACTCC    CCGTTGCGTCAAAAT  82 50
LQRI_RS11080 2566779 .. 2566810 -  -6.7  -5.79595   CTTTAAAAGAAAAAA      GATGCCCACCACTT ATAAA AAGTAG-GGACATC      TGTTTTATCGCCTGT 100 45
LQRI_RS11075 2565993 .. 2566023 -  -7.7  -4.77775   ATTTTACAAAATAAA       GAATTCGACCC GGTTATAAT AGGTCGAATTC       CCTTGATATAGCTTT  87 54
LQRI_RS11070 2551619 .. 2551647 -  -7.5  -5.80248   GAACACACAAAAAAA       CGGAG-TGGGAC CTGTTT ATCCCAACTCCG        TTTTTTAATTCAGCC 100 59
        sigI NONE
LQRI_RS11055 2548487 .. 2548502 -  -3.4  -3.77206   TATAACCTTATTAAA              TATATT TTGT AATATA               TTCTCCAAATGGCAG  54 50
LQRI_RS11050 2547393 .. 2547417 -  -4.1  -3.47227   GCCTAAGCATGACAA          CCTACATTGCC CTG GGCGCCGCAGG          CCTTCCGGTATTTCA  52 513
LQRI_RS11035 2544108 .. 2544120 -  -5.5  -3.53444   CCATGCTTGTTCAAA                GCAGC AGC GCTAC                TGTCGGCCTTACCAT  58 416
LQRI_RS11025 NONE
LQRI_RS11020 2542513 .. 2542523 -  -2.6  -3.48276   TGTTGTTCTATATAA                 TTAT ACC ATAA                 AATTTAGTCAATTTT  46 29
LQRI_RS11015 2541705 .. 2541734 - -13.8  -3.64103   TATCCATACTTTAAA       TGGATTGTCTCA TTAGAG TGAGACAATCCA        TTTATTATGTCAAAC 100 35
        asnA 2539823 .. 2539839 -  -3.1  -4.32046   TCTTTAAAAATTAAA              TATAATC TTT AATTATA              ATCATAATCTATAAT  57 34
        asnS 2538244 .. 2538282 - -11.2   -4.0865   TGCAATAAAACACAA   GGGACGGTTTTTATAA AAGTGCA TCACAAAAACCGCCCC   TTTCTTTTTTACATC  93 60
LQRI_RS10990 NONE
LQRI_RS10985 2533545 .. 2533580 -  -9.8  -4.67608   TACCTTAACACAAAA    GTACCAAAGTCCGGCAT CAA AAGCCGT-CTTTGGTAC    AAATCACACCCAAAA  93 54
LQRI_RS10980 NONE
LQRI_RS10975 2532353 .. 2532364 -  -4.4  -3.60296   TAGTTTTATTTGAAA                CTGT ATCC ACAG                 TTATTATTATACTAT  56 273
LQRI_RS10970 2531835 .. 2531886 -   -15  -4.06502   CATTTGTAAATTAAA TATCATACAAAGAAAAAACAAATT TTAA AATTTGTTTTTTCTTTGTATTAAA TTTCAAATATATTTC 100 63
LQRI_RS10965 2531334 .. 2531353 -  -9.3  -4.35327   TCATGAAAAATTAAA            GGAGAGC GATAAA GCTCTCC             TTTGTTATTTATAAG  89 50
LQRI_RS10955 2530101 .. 2530119 -    -6  -3.72695   ATGTTGTCGAGGAAA             TCATCTCC ATT GAAGACGA             AGAAATAGTTGCCGT  64 207
         lon 2525093 .. 2525121 - -10.4  -5.72616   ATTCACATAAAAAAA        CAGCCGTCTTAC GTTTT GTAAAACAGCTG        TTCTTGTATATTTTA 100 152
LQRI_RS10935 2523004 .. 2523022 -  -3.2  -2.63182   TATTCAAAAAAGGAC             GAAGTT ACGGCAA AACTTC             TTAGACTTTTGGACT  43 259
LQRI_RS10920 2520453 .. 2520463 -    -4  -3.40558   TACAGATTTTAAATA                 GTAA TTT TTAC                 TGTTCCCTGATTTCA  51 22
LQRI_RS10915 2519589 .. 2519604 -  -2.6  -3.32268   TAAGTACTGTTATAA              CCTAAA TTTT TTTAAG               TACAGAAACTCCAAA  44 11
LQRI_RS10910 NONE
        mreC NONE
        mreD 2517090 .. 2517103 -  -2.3  -3.79909   TGAAAGCATTAATAA               CGTCT CGAA AGCCG                CTCCAATTCCTCAGA  50 5
        mrdA NONE
        minC 2513969 .. 2513983 -  -2.8   -4.4261   GTGTCAACACCAAAA               TCCCTT TTT AAGGCA               AAATCCTTTTAAACT  58 133
        minD NONE
        minE NONE
LQRI_RS10875 2512247 .. 2512271 -  -5.7  -2.98015   TGCAATTATCATAGA          TGCTTCCGG AATGACA CCGGAAGAA          GTGTATGATGAGCTT  53 116
LQRI_RS10865 2510806 .. 2510823 -  -7.7   -2.7535   TGTGGTAATACATTA             TTGCGGC CAAT ACCGCAA              AAACAGGGTCAATTT  65 137
LQRI_RS10860 2509771 .. 2509784 -  -3.7  -3.56226   AATGATGGACAAATA               CGGCG ATAA CGACG                AGGACATGCGCAAGG  52 235
LQRI_RS10850 2507839 .. 2507849 -  -2.6  -3.32695   TTTTTATAAACAAAG                 TTTA TCA TAAA                 ACCTCCTCCTTTTCA  44 38
LQRI_RS10845 2506591 .. 2506608 -  -7.7   -4.5187   CTGAAAAAAAGTAAA             GAGGACA TAAA CGTCCTC              TTTTTCATATATATT  82 94
LQRI_RS10835 2504984 .. 2505011 -  -6.3  -4.43624   AAACTATATAACAAA        GCCCCCTTGAGA TATCT TCCCA-GGGAGC        GCCACTTCCAAACAA  74 298
        ribD NONE
LQRI_RS10825 NONE
LQRI_RS10820 NONE
        ribE 2501328 .. 2501354 -   -11  -5.38951   AAGCCAGACAAAAAA         GAAGGGTCTT GTCTTCA AAGACCCTTC         TTACGTTGTCTTTAT 100 37
LQRI_RS16390 2500168 .. 2500193 -  -7.1  -4.26589   AGGATATATTTAAAA         GAAAATTTTAA CTCG TCAAAATTTTC          CCGGGCAGAACCCTG  76 7
LQRI_RS10805 2499989 .. 2500023 - -11.7  -2.59482   TAAAGGATTAATTTA     TTATCAGGATAACTT GTTTA AAGTTATCCTGATAT     ACATTCTGGAGCGGG  87 32
LQRI_RS10800 2499813 .. 2499838 -  -8.5   -5.9667   AAAAATATAAAAAAA         GTTATGTAC-CA CTT TGCGTACATAAC         TTCAATTGGAGCGGG 100 31
LQRI_RS10795 2499067 .. 2499093 -    -8  -5.20633   AAAAAGATACAAAAA         CGGGATGGCAAA TTA TTCACCATCCCT         TTTATATATTTTCAC  93 79
        hprK NONE
LQRI_RS10785 NONE
        murB NONE
        rapZ NONE
LQRI_RS10770 NONE
LQRI_RS10765 NONE
        whiA NONE
LQRI_RS10755 2490571 .. 2490626 -  -5.9  -4.36993   AAGGCCAAAAAAATA TCGACAAACCATATCAAAAATCAACAC TAAA ATGCCAATCTT--ATATGGTTTGTCGA TATTCTCTATTTTAT  72 57
     spoIIAA NONE
     spoIIAB NONE
        sigF 2488813 .. 2488832 -  -5.8  -6.25578   AGGAAATAAAAAAAA            CAATATGC AGGA ACATATTG             CTTTATATAGCATCA 100 85
LQRI_RS10735 NONE
      spoVAC NONE
      spoVAD NONE
      spoVAE NONE
LQRI_RS10715 2485924 .. 2485937 -  -4.5  -2.94337   TACGGCAAAACACTA               GTGCC TTGC AGCAC                TTCTTTTTAGTACCT  49 9
LQRI_RS10710 2485313 .. 2485367 - -14.6  -3.34398   CTTTTGCTCCAAACA TAAAACAGAGCACGGCAGAACTTGTT TTC AGCAAACTCTGCTATGCTCTATTTTA AATTATGCAAAAAGG 100 41
        trmL NONE
LQRI_RS10700 2482793 .. 2482812 -    -3  -3.37464   GTATTAATTTTACAA            TTAATTTA CCAA TAAATCAA             CATATTTTTCAATAT  48 119
LQRI_RS10695 NONE
LQRI_RS10690 2481304 .. 2481320 -  -2.2   -3.1314   TAAAGCGTAATAAAT              GCCGAT TATTT ATCGCC              GGTCTTTTCCATTAT  42 14
LQRI_RS10685 NONE
LQRI_RS10680 NONE
LQRI_RS10675 NONE
LQRI_RS10670 NONE
LQRI_RS10665 2468578 .. 2468595 -  -4.3  -3.67775   ATTTCTAGTCAATAA             TTTTAAT CTTT ATTAAAA              CCTGGCAATGCCAGA  56 10
         gap 2467249 .. 2467299 - -11.5  -3.90744   TCTTTCTGCAAAGAA CCTTAAATTCAAAAA-GGCCCGGT TTTA ACCGAACCTTTTTTGTATTTAAAG CTATAATTATTTTGC  95 32
         pgk NONE
        tpiA 2464928 .. 2464964 -  -8.1  -3.76775   TTGAATATAGTTAAA    TAAAACAGTCCCTTTAA TTT TTGGCGGGACTGTTTTA    TATAAACTGTACAAA  77 69
        gpmI 2463218 .. 2463237 - -12.2  -5.73978   AGCACAAATAAAAAA            CTTCGGCA GTAA TGCCGAAG             TTTTGGGTATAATTT 100 74
LQRI_RS10635 2461285 .. 2461295 -    -4  -3.05963   ATTTCCATTTTAATA                 TTTC CGG GAAA                 ACAAATCAACCTTTT  48 41
         eno NONE
        secG 2459357 .. 2459381 -  -9.4  -5.56112   ACAAAAAGCAAAAAA          GGAAACTGCA AATAA TACAGTTTCC          TTTTTCAATTGTCTT 100 39
LQRI_RS10620 2458461 .. 2458479 - -14.6  -3.28791   ACTGTCTCTTTAGAA             CCACTGGC ATA GCCAGTGG             TTTTCTTTAAACAAT 100 108
        tnpA 2457768 .. 2457786 -   -16  -3.60151   TCGGTCAAATCATAA             CCACCGGC TCA GCCGGTGG             TTTGCTCTAGCCCTA 100 126
         rnr NONE
LQRI_RS10605 2454770 .. 2454792 - -13.6  -2.72049   TATAGTCTTTAATGA           GGAGGTAAAA GCA TTTTACCTCC           TCATAATCGTCATCC 100 122
        mtaB 2452909 .. 2452923 -  -2.8  -3.21962   ATAGCACCAACCCAA               CATCGT AAC ACAACG               CGTATATATATATAG  44 171
LQRI_RS10590 2452569 .. 2452591 - -13.6  -5.38321   AAATATTATAAAAAA           CTCCGTATAA TAA TTATACGGAG           CCTTCTTTGCCGATA 100 16
LQRI_RS10585 2451503 .. 2451515 -  -4.9  -3.65351   TCAGTGCCACGTAAA                TTTAC CCT GTAAA                TTTTTACAGTTTTAA  58 67
        ruvX 2450937 .. 2450947 -  -2.6  -2.56343   ATTTTAATTATCAAG                 TATA GAT TATA                 TCACAATATTCTATA  40 88
LQRI_RS10575 2450568 .. 2450603 - -10.6  -4.04174   TTTCATACAAGCAAA    TCCCCGAACCTGA-ATT TTC AACACCAGATTCGGGGA    TGTCCTCCTTTTTTT  91 39
LQRI_RS10570 2449191 .. 2449207 -  -2.3  -3.43081   ATATAATTCCAAATA              TGTATTT TGT ATATACA              ACGTCAAAACAAAAT  46 204
LQRI_RS10565 NONE
LQRI_RS10560 NONE
LQRI_RS10555 2444917 .. 2444932 -  -5.4   -4.2704   GGTAGCAGCAACAAA              GCAAAC TGTT GCTTGC               ATTTACCAAACCTGA  66 66
        rplU NONE
LQRI_RS10545 NONE
        rpmA 2443892 .. 2443918 - -12.4  -4.64846   GCACAAATCATAAAA         TTAAATCCCGGT AAA ACCGGGATTTAT         AATTTTATTTTTTAT 100 37
        obgE NONE
LQRI_RS10530 2442177 .. 2442200 - -11.1  -4.31549   TAAAATTTAAAATAA          TGGGGATAG TTGACC CTATCCCCA           TTCATGTCTTAGTAT 100 34
        yhbY 2441373 .. 2441383 -  -2.6  -4.85599   TCTATTGTATAAAAA                 TATT GAC AATA                 AAGCGTTTTACACCA  68 467
LQRI_RS10515 NONE
LQRI_RS10510 NONE
LQRI_RS10505 2439264 .. 2439285 -  -5.9  -3.45593   AATAAACTTCAAACA           CTTACAGAA GTTT TCCCGTAAG            TCTCTTTTTGCTTAA  61 5
LQRI_RS10480 2435832 .. 2435861 -  -4.4  -3.02471   CCCTGACCATACATA      CAGCGGCTAGCTTT TGGA AAAAC--GCCGCTG       CCTTTTATGCTTCAT  50 2
LQRI_RS10475 NONE
LQRI_RS10470 2432387 .. 2432412 - -12.7  -4.00001   TAAGAAAAAATAATA         CAAAAGGGACC GCCA AGTCCCTTTTG          CTCCATATTCATTAA 100 57
LQRI_RS10465 2431788 .. 2431809 - -10.2  -5.08255   ATTTGCAAAATAAAA           TAGTCCGG GCAATA CCGGACTA            TTTTTAATATTTCTT 100 29
LQRI_RS10460 2431071 .. 2431091 -  -2.5   -5.0133   TACCTTGTTAAAAAA            GGTATTCCT TTC AGAAACGCC            CATGAAATTATCGGG  70 379
        ruvC NONE
        ruvA 2427342 .. 2427355 -  -2.3  -3.06831   TTAATGCTCATTTAA               GGTCT TGCC AGTCC                TTTAAGAGCATTTTT  42 8
        ruvB NONE
LQRI_RS10430 NONE
        pilM 2424329 .. 2424349 - -11.2  -4.57882   TGCAACAATAACAAA            GGAAGCCT GTGTA AGGCTTCC            TTTCAAGTATCGGAC 100 65
LQRI_RS10420 2421177 .. 2421201 -  -5.7  -5.56673   AGGGATAATAAAAAA          GAAGGCAGTTT TTT ACACCACCTTC          TTTTCTTTGTTTCAT  90 57
        galE NONE
LQRI_RS10410 NONE
         rph NONE
LQRI_RS10400 2417212 .. 2417234 -  -9.9  -5.03713   AAGAATCAAACAAAA           GGCTATTGC TTTTT GCAACAGCC           TTTCTATTATTATAA 100 130
LQRI_RS10395 2415058 .. 2415092 - -15.3  -4.13244   TCAGAACAACAACAA     TGGGCTATTTCAAAA ATCTA TTTTGAAACAGCCCA     TTTTATATTGCATAC 100 53
LQRI_RS10390 2412822 .. 2412838 -  -4.3  -5.34381   AAATTCAAAGAAAAA              TCCCCAC GTA GAGGGAA              AACAAAGTGGGGATT  81 77
LQRI_RS10385 NONE
LQRI_RS10380 2412497 .. 2412521 - -10.8   -5.4505   TTTTTCAAGAAAAAA         CCCTAGAAGGC TCTC GCCT-CTAGGG          TTTCTTGGCCTGCCC 100 31
LQRI_RS10375 NONE
LQRI_RS10370 2410615 .. 2410633 -  -2.5  -5.00884   ATTTTGGGCAAAAAA            GCCTATCT ATAT AGATAG-C             TTAAAATCAAAATTA  66 75
LQRI_RS10365 2409927 .. 2409954 -   -15  -2.62616   CCACTCTGTATATTA        TAACCACTCTGC CATT GCAGAGTGGTCA         TTTCTTATAAAATCA 100 38
LQRI_RS10355 NONE
LQRI_RS10350 NONE
LQRI_RS10345 NONE
LQRI_RS10340 NONE
LQRI_RS10335 NONE
        glnA 2400770 .. 2400787 -  -2.1  -4.40358   ACTTATCTTAGAAAA             TCTTAAA TAAT TTTAAAA              TACATCTGTTTTTCC  57 10
LQRI_RS10325 2400037 .. 2400055 - -10.2  -4.44819   CAGAACATATTAAAA             CCCCGGCA TTA CGCCAGGG             CATCTATTAGGGGGT  93 142
LQRI_RS10320 NONE
LQRI_RS10315 NONE
LQRI_RS10310 NONE
LQRI_RS10305 NONE
LQRI_RS10300 NONE
LQRI_RS10295 NONE
LQRI_RS10290 2391397 .. 2391409 -  -6.3  -5.47821   ATTCATGTAAAAAAA                TTGTC TGA GACAA                ATCAGTTTTCTTTGT  88 192
LQRI_RS10280 2388896 .. 2388925 - -13.9  -5.07941   AAAATTATATAAAAA       CTCTGTAATTTAT TTTC ATAAATTACAGAG        TTTTTATAATGGGGT 100 76
LQRI_RS10275 2388446 .. 2388491 - -22.3  -4.53765   ATACACATCATAAAA CATAATGCTAATGGGCATTCA CGTC CGAATGCCCATTAGCATTATA TTTTCACTCTATAAC 100 29
LQRI_RS10265 2385632 .. 2385659 -  -9.2  -5.60993   TGTTTCATAAAAAAA        CCTTCATCCC AATACAAA GGGACGAAGG         TTTGCTTCGCGGTAC 100 379
        pheS 2384522 .. 2384536 -  -4.4   -3.1458   GGTAAAAATCAGAGA               TTAAAA CTG TTTTAA               GAACCTGATATCGTT  50 11
        pheT 2382042 .. 2382076 -  -8.6  -2.82681   CAAAAGCTTACTATA     GCCGGAGAAAAGAA TCTCCTC CCCCCTTCTCCGGC     TATTTATTATTCATT  71 42
LQRI_RS10245 2379984 .. 2380013 - -14.5  -4.82901   TTTTTGCTATAAAAA       TAAGGAGTCAGAA AGCT TTCCGACTCCTTA        TTTTATTTATTCCAT 100 114
LQRI_RS16065 2378737 .. 2378748 -  -4.4  -4.84017   AACTCTTTACAAAAA                GCAA GCCT TTGC                 CAATTAATAATCAGA  70 52
LQRI_RS10235 2378530 .. 2378562 - -10.8  -5.15969   TGCCAATTGAAAAAA      GGTTTGAAAGAATT CTTGC AATCCTTCCAAACC      TTTATGGTGCGGACG 100 30
LQRI_RS16385 NONE
LQRI_RS10225 2376244 .. 2376264 -  -5.4  -2.83894   ATTATTACGATTATA            GGCAGATA TTTAT TATCAGCC            TCTCTAGTTACTGAA  53 168
LQRI_RS10205 2372921 .. 2372960 - -10.8  -2.98387   GCGTATAAAATATTA  CAGGGGGGTTCAGGAAACC AGA GTTTCCCTGAACCCCT-TG  ATTATACTATATACG  83 32
LQRI_RS10195 NONE
LQRI_RS10190 NONE
LQRI_RS10185 2366248 .. 2366282 -  -5.1  -4.20367   TTTTTTAACAAACAA     GGATCTATTTCAAAA ATCTA TTTTGAGATAGTCCC     TTCAAGGACTCACCA  64 149
LQRI_RS10180 2365292 .. 2365302 -  -2.6  -2.78463   ACCCTTTTTATGAGA                 TATA TGT TATA                 AAATTCTTGCACACT  40 341
LQRI_RS10170 NONE
LQRI_RS10165 2363850 .. 2363868 -  -2.4  -4.32034   CGATTATCATCAAAA             TACTGATA TAT CATCTGTA             CTACGCATGAATCCC  55 179
LQRI_RS10160 2362991 .. 2363001 -  -6.8  -2.66216   CTGGACTATTATAAG                 TGGC ACT GCCA                 ATAATAGAAACCATA  59 394
LQRI_RS10150 2361601 .. 2361618 -  -2.1  -2.62463   TTTATCATTTACAAG             TCTATTT AAAA AAATAAA              AATTTTTGTTAAATA  40 85
LQRI_RS10145 NONE
LQRI_RS10140 NONE
LQRI_RS10135 NONE
LQRI_RS10130 2356524 .. 2356560 -    -6  -5.37865   TTAAGAATTAAAAAA   GCCTTCACCTCATAACA TAAA TGTCA-GAGACGAAAGC    CAGTTTCTTCCGTGG  86 357
LQRI_RS10125 2353876 .. 2353919 -  -5.3  -3.90316   ATTCTTTTAAAAACA CCCGGTCAGACTCCACACAA ACACA CCACG-GAAGCCTGACCGAG GTTTGAAAAAGTTAA  61 47
LQRI_RS10120 2353376 .. 2353405 -   -10  -4.70583   GGCATTAACACAAAA       GGCCGGCTGTCT TTCACC AGACAGTCAGCC        TTTTTTCGTGTGTTT  93 78
LQRI_RS10115 2351645 .. 2351674 -  -3.6  -4.71418   AACATCTAAAATAAA      TCTGAGACGC-CGC GAAT GCGAGCTTCTC-GA       TTTTCTGTTCCTCAG  67 228
LQRI_RS10105 2347976 .. 2347993 -  -4.3  -2.52464   TCCCCCCTTAATTTA             TATATAT ATAT ATATATA              TTAACAAAAGATCAG  48 43
LQRI_RS10100 NONE
LQRI_RS10095 2346502 .. 2346532 - -15.6  -3.81885   CATATAAATACAGAA       CAAGTCAGGAAGAA CCT CTCTTCCTGACCTG       TTTCAACTATCCCTC 100 32
LQRI_RS10085 2343946 .. 2343970 -  -7.9  -4.99043   TTTTCATAAAGAAAA          CAGGTACCTTT TTG ACAAGTACCTG          TTTTTATCTGTTTTT  89 153
LQRI_RS10070 2338622 .. 2338665 -  -2.6  -5.93809   TTCCCATAAAAAAAA GAGCCGTTGCA-GTGAAAT TCATCCC ATTTGATGTGCAACAGCTC CATTATTTATTTTCC  82 76
LQRI_RS10065 2336575 .. 2336587 -  -3.5   -3.2059   AGGTAGCACAACAGA                TTAAT TTA ATTAA                AATTATAGCATCCAG  48 70
LQRI_RS10055 NONE
LQRI_RS10050 2331723 .. 2331746 -  -6.2   -2.7868   ATAATTATATAGAAT          TTTTTCATAT TTGT ACATGAAAAA           TGGTATTTTTGCCTA  57 38
LQRI_RS10045 NONE
LQRI_RS10040 NONE
LQRI_RS10035 NONE
LQRI_RS10030 NONE
LQRI_RS10025 2324989 .. 2325005 -  -6.7   -4.1721   ATGTATATCGGAAAA              TAAAAAC AGA GTTTTTA              AGGTTATACCATAAA  74 81
LQRI_RS10020 NONE
LQRI_RS10015 NONE
LQRI_RS10010 NONE
LQRI_RS10005 2319303 .. 2319313 -  -5.4  -3.37612   TTTAATGTCAACCAA                 CAGA ATG TCTG                 ATGGCAAATTTCCCC  58 127
LQRI_RS10000 NONE
LQRI_RS09995 NONE
LQRI_RS09990 2314799 .. 2314833 - -13.1  -5.37043   ATTGCATATAAAAAA    CCCTGCAAACATCACT ATAA AGTGAC-TTTGCAGGG     TTTTAACCCAATCTG 100 90
LQRI_RS09985 NONE
LQRI_RS09980 2313692 .. 2313714 -  -5.5  -5.30575   TAAAAACTTAAAAAA           CCCGGGA GCAAACCAT CCCCGGG           TTTTCCTTCAAGCAA  80 46
LQRI_RS09975 2312189 .. 2312213 -  -2.2  -2.55238   AGCAAAACAAACTAT          TCTGTCAG CAAAACAAC CTGACAAA          GATTATGGGCACACA  39 175
LQRI_RS09970 2310547 .. 2310595 - -11.4  -5.61881   CCTTAAAAATAAAAA CAAACAGGAGCTGC-CCG-TTAAT TTG ATTAACCAGAGCAGCTCCTATTTA TTTTACGCCATTCAC 100 80
LQRI_RS09955 2305679 .. 2305717 -    -4  -5.45802   GCTTGAAAACAAAAA  GAGTTACTGCCCACCTA TTCAGG TAGTTTG-CAGTAACTC   TTTCCGTAAATCTGT  77 56
LQRI_RS09950 2304065 .. 2304083 -  -2.5  -3.53767   AATACTCAAGTACAA            CAA-AGGT ATCA ACCTATTG             CGTTCCATGCTGCTA  46 89
LQRI_RS09945 2302912 .. 2302932 - -12.6  -3.53012   TTTTTCTGTTTCAAA            TGTGGGGG CAAAT CCCCCACA            TTTGAAATATAAAGC  91 97
LQRI_RS09925 2294986 .. 2295014 - -13.3   -5.0538   CGCTATTTTAAAAAA        GAAGTTATCCGAA AAA CCCGGATAACTTC        TTTTTGTCATACCTT 100 47
LQRI_RS09920 2293726 .. 2293753 -   -15  -3.73509   ACAGCAAAGTCTAAA        GAAGCAGCTTCA CCCC CGAAGCTGCTTC         TTTCTTGTTAAAATC 100 84
LQRI_RS09915 NONE
LQRI_RS09910 NONE
LQRI_RS09905 NONE
LQRI_RS09900 2290961 .. 2290995 -  -6.6  -5.26158   CAAAGAAAAAACAAA     GGCAATACAAGC CGGAACACTTT GCTTATATTGCC     TAATATATCGGACTT  88 98
        glgA 2289209 .. 2289243 - -10.8  -2.79452   ATCCTTGAACATAAT     TTCAGGGCTATTGAAA AAA CTTCAATAGCCCTGTT     TTTATTGTTTGTCCG  83 101
LQRI_RS09885 2286503 .. 2286519 -  -3.7  -2.80344   CTTTTAGGTAATAAT              TGTACAA TAT TTGAACA              TATCTTTTTTGCCAT  45 82
LQRI_RS09880 2285105 .. 2285141 - -10.2  -4.63932   TATGTTGCAATAAAA    TAACCCGGTATGGCTT TGATT ATACCGTACCGGGTTA    ACAAATCCATGATAT  93 51
LQRI_RS09875 2283553 .. 2283565 -  -4.8  -2.90583   CAATATAAGCCAAAC                GGCA AACAA TGCC                CACATTCTGTGTTGA  51 111
LQRI_RS09865 2278862 .. 2278879 -  -2.7  -3.80855   TCGTTTAAAAATTAA             TGTTTTC TTCT GTAAACA              CTATATTTTTCATTA  51 4
LQRI_RS09860 NONE
LQRI_RS09855 2274902 .. 2274930 - -14.9  -4.27062   TTAATGAAAAGTAAA        TAAGGTATAACTT AAT AAGTTATACCTTA        CGAAATCATCTAAAT 100 165
LQRI_RS09840 2270425 .. 2270439 - -11.4     -2.89   AGTTGTATAGAATTA               TGGGGC TCC GCCCCA               AACCCCGTCCTCACC  86 208
LQRI_RS09825 2268530 .. 2268559 -  -2.1  -4.28045   ATATCAGCAAAAGAA       TGGGCTCCATATT TTAA AATACAGAGCCTG        AAAAAGTTATGCAAA  54 86
LQRI_RS09820 2267460 .. 2267473 -  -3.9  -4.05848   AATTATACAATTAAA               TGTAT AAAT ATACA                ATGATTACTTTATAA  58 178
LQRI_RS09810 2266776 .. 2266815 - -10.7  -3.47713   TAAAAATCTGAAATA  CACCCACCTGCAGCCGGC TCAAT GCCTATTGC-GGTGGGTG  TTATCAATTTAACGG  85 237
LQRI_RS09800 2263434 .. 2263445 -  -2.2  -2.63555   GACTTATATAACTTA                TCGG AGTG CCAA                 GTCTGATTTTTTACT  40 39
LQRI_RS09795 NONE
LQRI_RS09790 2259597 .. 2259628 - -12.5  -4.83032   ACACCAAATACAAAA      GCTGTGAAAAGAA ACCTGA TTCCTTTCACAGC       TTTTTTGCAATTCTT 100 63
LQRI_RS09780 NONE
LQRI_RS09775 2257258 .. 2257272 -  -4.4  -3.25652   GGTATCCAATGAATA               TTATAT TAT ATATAA               GACGTTATCACTTTT  52 306
LQRI_RS09760 NONE
LQRI_RS09755 2252050 .. 2252068 -  -5.3  -3.78934   GTTTTCTGACAATAA             GTTCGGT TTTTC ACCAAAC             TTTTCTATAATAATA  61 138
LQRI_RS09750 NONE
LQRI_RS09745 2251237 .. 2251263 - -13.2  -4.77757   TTGGAAAAAGTAAAA         GAAACCACAAAA ATA TTTTGTGGTTCC         TTTGCTCTCAAATTT 100 67
        uvrB 2248798 .. 2248815 -  -4.1  -3.53814   CAAAAGGATAATCAA             TATGACG GCTA CGGCATA              TGACCTCTCATATAA  52 370
LQRI_RS15860 NONE
        uvrA 2244581 .. 2244591 -  -5.4  -3.94465   CTCAAAATTAAAATA                 TGGA TTA TCCA                 GGTTTATGCATATAA  61 229
LQRI_RS09720 2240820 .. 2240850 -  -8.5  -5.61689   AAAAGCAATAAAAAA      GCATTTAC-TCAGG TGTC CCTAAAGTAAATGC       TTTTTTTGTGCCACT 100 53
LQRI_RS09715 2239506 .. 2239520 -  -2.1  -3.96216   CCCTTATCGAAATAA               CTGCT TAATT AACAG               ATAAACAGATGCAAT  52 70
LQRI_RS09710 NONE
        sigI NONE
LQRI_RS09700 2235347 .. 2235391 - -15.9  -5.02357   CATAATTAAATAAAA GTCAAAAAAGGACGGTTACCG TAA CAGTATCCGTCCTTTATTAAC GTCAAATCAATATTA 100 38
LQRI_RS09685 NONE
LQRI_RS09680 2231312 .. 2231336 -  -5.7  -3.51837   ATATAATTAAGAAGA          GTGACTGTTAA CAT TTAACCGTCCC          GATTCTTAGCAACAC  61 74
LQRI_RS09675 2229872 .. 2229895 -  -7.4  -3.07233   TCATAATGCCCAACA          TTACCGGCAG CAAT CTGCCCGCAA           CTCTGTCTGAAGAAA  61 417
LQRI_RS09665 NONE
LQRI_RS09660 2225397 .. 2225410 -  -3.9  -2.76422   CACTCTGAAAAAACC               GTTTT TCAT AAAAC                CACCTTGAACACTAA  46 55
LQRI_RS09655 2223446 .. 2223462 -  -9.4  -3.71851   AATAATATAAAGTAA              GAGGGC GTGAA GCCCTC              TTGTTTTATTCCTGC  82 31
LQRI_RS09645 NONE
LQRI_RS09640 NONE
LQRI_RS09635 2222509 .. 2222537 - -15.5  -5.27335   TTCTTTAAACAAAAA        GACCTTGCATACA ACA TGTATACAAGGTC        TTTCCATTATTGGTG 100 36
        tnpA 2221780 .. 2221798 -   -16  -3.62816   GAAATATAATCATAA             CCACCGGC TCA GCCGGTGG             TTTGCTCTAGCCCTA 100 126
LQRI_RS09625 2218893 .. 2218921 - -16.1  -4.72272   TCTTCTTATTAAAAA        TGAGGGACGACTG TTA CAACCGTCCCTCA        TTTTTTCATAAGTTT 100 130
LQRI_RS09615 2216167 .. 2216181 -  -2.2  -4.66264   GAAAATTTTGAAAAA               TAAAAA GAG TTTTCA               TTTTTCTTTTCTTAT  59 102
LQRI_RS09610 2214897 .. 2214908 -  -4.4  -4.09685   CTTTATTTCGCAAAA                CCAA TCCT TTGG                 CACAGGTTTTGTAGG  60 314
LQRI_RS09600 2214000 .. 2214010 -  -2.6  -4.82901   GTTGCTTCACAAAAA                 TATT TTC AATA                 TTATTTTAGCATTTT  63 74
LQRI_RS09595 NONE
LQRI_RS09590 NONE
LQRI_RS09585 NONE
LQRI_RS09580 NONE
LQRI_RS09575 NONE
LQRI_RS09570 2208469 .. 2208483 -  -7.2  -3.21099   TGCTTTTATCATCAA               GATTTC CGG GAAATC               CAAGAGGTCAGAACG  66 109
        nuoE NONE
LQRI_RS09560 NONE
LQRI_RS09555 NONE
        nuoF NONE
LQRI_RS09545 2203188 .. 2203211 -   -11  -4.60255   ACAATTTTGCAAAAA          GGTCAGGCTT CTGT ACGCCTGACC           CTATTATATCACTTT 100 113
LQRI_RS09540 2202422 .. 2202452 -   -12  -5.83211   TACTAAAATAAAAAA       GACAGGCAAAGG TTTTACT CCTTTACCTGTC       TTTTTTATTTAATCT 100 17
LQRI_RS09525 2199119 .. 2199132 -  -3.8    -3.794   TTGGAATGGATTAAA               CCTG ACGGAG CAGG                CCTTACAGAAGACTT  57 215
         fba 2196770 .. 2196806 - -13.9  -3.48292   ATTTATTAGTAAACA    TAAAAAGTGAAGGTCAG CAA CCGACCTCCACTATTTA    TTATATCACAATTTG 100 46
        lepB 2196127 .. 2196146 -  -5.7  -4.62441   TTTTATATAAACAAA            GCTCAGA ATGACA TCCGAGC             TTTTAAAAACATTTG  74 43
LQRI_RS09505 NONE
LQRI_RS09500 NONE
LQRI_RS09495 NONE
LQRI_RS09490 2191379 .. 2191396 -  -2.8  -2.95073   CCTTTAATACTAAAC             GAAAAT TCCTTT ATTTTC              AACCGATTTTCACCC  42 35
LQRI_RS09485 2190096 .. 2190127 -  -8.2  -4.60041   ATTCATTTCTAAAAA      GGGGAGAAAGATT TGCATTG AATC-TTCTCCCC      TTTTATAATATCTGC  85 55
LQRI_RS09480 2188736 .. 2188775 - -10.8  -2.98387   GCGTATAAAATATTA  CAGGGGGGTTCAGGAAACC AGA GTTTCCCTGAACCCCT-TG  ATTATACTATATACG  83 32
LQRI_RS09460 2183746 .. 2183760 -  -4.2  -2.94099   GTCTGTTATGACAGA               CCGG CTGCCTT CCGG               TGAGGACGGGGTTTG  47 59
LQRI_RS09455 2181519 .. 2181566 -    -5   -5.7946   TTCTCAATAAAAAAA TACTCAAAAATCCGATACCC AATTGTCA AGGCACCGGATTTTTAAGCG CATTTCATCTGCTTA  90 402
        trxA 2180864 .. 2180887 -  -8.3  -5.18355   TTCAAAAAGCAAAAA          CCATACATT TTAAAT AATGTATGG           CTGATAGAAAGCATG  93 87
LQRI_RS09440 2179747 .. 2179778 -  -8.1  -5.28561   AACATATAATAAAAA      CTCCTTCATCC TAAAAGCAAG GGACGAAGGAG       CATTCCGCGTTACCA  93 407
LQRI_RS09435 NONE
LQRI_RS09430 2177936 .. 2177962 - -13.8  -5.08824   TTTTTATTCAAAAAA         GCCTGAGAAGCC AAA AGCTTCTCAAGC         TTTCCAAAACCAGAG 100 59
LQRI_RS09420 NONE
        prfB 2175098 .. 2175133 - -15.6  -2.88032   TAATAAGAGCCAAAT    TCAAAAGTCTGCAGCT TTAA AGCCGCAGACTTTTGT     CATAATTAAACCGCT 100 81
LQRI_RS09405 2171081 .. 2171100 -  -2.2  -3.03007   AATATTTTTCTAAGA            TATTCAAT TTCC ATAGAATA             CATCTCCATATGTAT  42 47
        larB NONE
        larC NONE
LQRI_RS09390 2167760 .. 2167792 - -15.8  -3.49182   ATATAGTATAATCAA     GGGGTTCAGGGAAAC TCTG GTTTCC-TGAACCCC      CCTGTAATATTTTAT 100 415
        gdhA 2162222 .. 2162248 - -10.9  -5.56673   ACGCAGAAGAAAAAA         GGAGTCAGAGA AATGA CCTCCGACTCC         CGTATTTTCAATTTT 100 58
        guaA 2160476 .. 2160508 -  -4.2  -5.32396   AGAGCAAAAATAAAA     GCAGC-GGACAAATT AAAT ATCTTGTCCCACTGC      TTTTTTACCTGTAAC  77 63
LQRI_RS09360 NONE
LQRI_RS09355 NONE
LQRI_RS09350 NONE
LQRI_RS09345 2157434 .. 2157450 -  -5.9  -2.65532   ACTATCGCAAATTTA              CCGTTTT TTA AAAACAG              AAGATCAAATCCGTT  55 102
LQRI_RS09340 NONE
LQRI_RS09335 2156300 .. 2156329 -  -3.5  -5.45802   GCTCCAAAACAAAAA       CCCCGGCTGTA TGTTTGTC TGCAACCGAGG        ATTTTTAAAATAATC  76 119
LQRI_RS09330 NONE
LQRI_RS09325 2155383 .. 2155393 -    -4  -3.63068   GGACATTATGCCAAA                 TACT GAA AGTA                 TAATCATTATTAAGA  53 35
LQRI_RS09320 NONE
LQRI_RS09315 2154230 .. 2154244 -  -7.2  -3.41878   TGTTTTAATTGACAA               GATTTG TAC CAAATC               GTCTGAGTATCTGCA  68 103
LQRI_RS09310 2152473 .. 2152500 -    -7  -4.87626   CGCCAATACGAAAAA        TCCACCTCTC AAAGAGCA GCGAGGTGGA         TTTTAAGGTTCACAT  83 131
LQRI_RS09305 NONE
LQRI_RS09300 NONE
LQRI_RS09295 2149056 .. 2149085 -  -6.5  -3.63991   TATTATTTGCAACAA       TCCATGC-ACCACC TAT GGCAGTAGCATAGA       GTCCACTTTTACCAA  64 49
LQRI_RS09290 NONE
LQRI_RS09285 NONE
LQRI_RS09280 NONE
LQRI_RS09275 NONE
        rbsD 2143361 .. 2143401 - -16.3  -2.82862   ATTAATCACTGAAAT  CTGCAAAAAGCACCTGGGA CAT TCCCAAGTGCTTTCCGCAT  TAAATTTAGTATTTA 100 73
LQRI_RS09265 NONE
LQRI_RS09260 2139437 .. 2139449 -  -3.5  -2.91274   TCTACTGCAATTACA                TTATA TTA TATAA                TAGATATATTACATA  45 112
LQRI_RS09255 2139001 .. 2139059 -  -2.6  -4.10855   AAAACCCGCGCAAAA CAAAAGCCCTG-C-GAAAACTGCGCAAT TTATC ATCAGGCAGATATCTGACAGGGCTTTTA ATTATTCTCAACCTA  53 44
LQRI_RS09240 2134056 .. 2134097 - -18.2  -3.98649   GATAATACAGAACAA CAGGGTTAACCGCCCG CTTACCGACT CGGGCAGTTAACCCTG  AAATTAACCGTATAA 100 81
LQRI_RS09235 2131627 .. 2131653 - -10.2  -4.50058   CAGGCATAATGAAAA         GGGAATATCCAT TTG AAGGATACTCCC         TTTTGACCGCTTTAT  93 70
        sigI NONE
LQRI_RS09225 NONE
LQRI_RS09220 2127134 .. 2127154 -  -8.2   -3.8046   TTTAAAAAGTTGAAA            GGGGGCCT TTACT ATGCCCCC            TACAGCCCTGTCTAC  73 354
LQRI_RS09205 NONE
LQRI_RS09200 NONE
LQRI_RS09195 2120638 .. 2120661 -  -3.9  -5.24291   AAAAGCAAAAGAAAA          GTCTGATAT GGGGCA AAATCAGAC           TTTTTGCTTTTTGTA  74 159
LQRI_RS09185 2115922 .. 2115940 - -13.2  -5.60993   TTCGTTATAAAAAAA             GAACCGGT AAA ACCGGTTC             TTTTTTTATAACAGA 100 62
LQRI_RS09180 2111715 .. 2111734 - -11.4  -4.67904   TATTAATTTTAAAAA            GGACCGGC AAAA ACCGGTCC             TTCACAAATAATTTC 100 49
        rpsO 2109902 .. 2109915 -  -8.1   -5.5208   TGATAATACAAAAAA               GCGGA TTAC TCCGC                CTTTTTATTATTTCC 100 33
LQRI_RS09155 2107503 .. 2107536 -  -6.1  -3.59402   TGTACATGAAATTAA     GTAAGGCGCAAAC AGAATCAA ATTCACGCCTTAC      TTTCATAAATGGGAT  64 74
LQRI_RS09150 2106156 .. 2106182 -  -6.5  -5.66684   CAAGGCATAAAAAAA         CCCCGACACCA CTAAT TGGAATCGAGG         ATTTTTGCCCTTTAA  93 37
        dpsA NONE
LQRI_RS09140 2104470 .. 2104495 -  -8.3  -6.14618   GAGAAAATAAAAAAA         GCGGAAGCTAA AATT TTAGCTCCTGC          TTCTTATTAAAACCG 100 59
LQRI_RS09135 NONE
        adhE NONE
LQRI_RS09125 NONE
LQRI_RS09120 NONE
LQRI_RS09115 NONE
LQRI_RS09110 NONE
LQRI_RS09105 NONE
        nuoF NONE
LQRI_RS09095 NONE
LQRI_RS09090 2092604 .. 2092635 - -18.2  -3.53091   ATTTCTTTTTCCAAA      CTAAAAGGGCAGCT AAAA AGCCGCCCTTTTAG       TTTGGTTATTAAAAA 100 100
LQRI_RS09080 2088909 .. 2088936 - -11.3  -5.64304   TAAGATAATAAAAAA        GAAGACCGCCC AAAAAA GGGCAGCCTTC         GTCTTTCATTTTGGT 100 50
LQRI_RS09075 2087657 .. 2087679 -  -9.2  -5.42862   AGACTCGTAAAAAAA           GGAGTCAAAA TAA TTCCGACTCC           TTTAATCTATATTCA 100 38
LQRI_RS09070 2086360 .. 2086394 -  -3.4  -2.81089   AGGTCAAATAGATGA     GGGGATTTAGGCGC AAAACCG GCTCCCTCATCCCC     TAAACGGTCTAAACA  45 66
LQRI_RS09065 2082919 .. 2082937 -  -3.9  -2.99259   CATTCATAAGAACCA             TTCTCTC CTTTC AAGAGAA             CCAATATTAAGTTTT  48 42
LQRI_RS09060 2082368 .. 2082394 -  -8.8  -5.86976   TCACAAAATAAAAAA         TCCCTGACAG AATTGAA CTATCAGGGA         TATGTCATTTAGTAT 100 83
LQRI_RS09055 NONE
LQRI_RS09050 2080255 .. 2080266 -    -3   -4.1193   ATATGAAAAATACAA                TTGT ACAG ACAA                 AAAGTATTGCACAAA  55 128
        murA NONE
LQRI_RS09025 2075424 .. 2075434 -  -5.4  -4.63675   ATCAAACCAAATAAA                 GGAA TCA TTCC                 GCTCCTCCCTCTCTA  71 38
LQRI_RS09020 2074980 .. 2074992 -  -4.9  -2.88544   GTTGACCTTGACATA                GTAAA AAT TTTAC                TTTTGAAAATCAAAA  51 87
        ftsA NONE
        ftsZ 2072177 .. 2072210 -   -17  -5.67063   CTTATGACAAAAAAA     CACAGGAGTATATC CTTTTC GATATACTCCTGTG      CTTTATTGTTGAAAA 100 45
     spoIIGA NONE
        sigE 2070162 .. 2070206 -  -2.4  -5.39721   CTAGCATAGAAAAAA CCTCC-CGGCAATAAT-TTA AAGTCAG TATCATTATTGCCACGGAGG TCATTTTTATACTGC  72 133
        sigG 2069220 .. 2069260 - -10.5  -3.39895   TGTCCCATTAATTAA  GGAGTCAGAGAACATCAAA ATG TTTTCCGCTCCCTGACTCC  TTCAAAATTTATCGA  85 145
LQRI_RS08990 2068825 .. 2068837 -  -3.5  -2.79983   TTATATAATACACTA                TAAAA TGT TTTTA                ATAAATACCGTTATT  45 51
        nrdR NONE
LQRI_RS08980 NONE
LQRI_RS08975 2065425 .. 2065445 -  -8.3  -5.30616   TTAGCCAAATAAAAA            GAGAGACCT TTT AAGTCTCCC            TTACTTTTTTTGTAT  93 54
LQRI_RS08970 2064453 .. 2064468 -    -9  -5.56264   CGGAAATAGAAAAAA              TCAGGC AAAA GCCTGA               CTGTAAAACAATTTT 100 431
LQRI_RS08960 NONE
LQRI_RS08955 NONE
LQRI_RS08950 2061606 .. 2061616 -    -4  -3.43947   GATAATATAAATATA                 GTAA TCT TTAC                 ACCAACAACTTGTCA  51 123
LQRI_RS08945 2060605 .. 2060615 -  -6.8  -2.54371   AACGAGCTTAAGTGA                 TGCC ATA GGCA                 AACCAAATGATTTTT  59 162
        dprA 2059410 .. 2059431 -  -6.1  -2.73994   ATTTTTTTAATAGTA           TATTATAAT ATTT ATTATAATA            TTGTCATATTTCAAT  57 54
        topA NONE
       trmFO 2055806 .. 2055818 -  -6.3  -2.74598   TTATAAATGATATTA                TCACA ACT TGTGA                AAAAATACAACTGTT  57 153
        flgB NONE
        flgC 2054638 .. 2054648 -  -3.2  -3.70902   TTTTTCATATTTAAA                 GACA GAC CGTC                 GGATTACCTTCCGAT  50 29
        fliE NONE
LQRI_RS08910 NONE
        fliG NONE
LQRI_RS08900 NONE
        fliI NONE
        fliJ NONE
LQRI_RS08885 NONE
LQRI_RS08880 NONE
LQRI_RS08875 NONE
LQRI_RS08870 2044865 .. 2044878 -  -2.3  -3.51329   TACGGTCAATCATAA               CCATC AACT GTTGG                TGCATCGGTTCTATT  46 142
LQRI_RS08865 2043457 .. 2043493 - -13.8  -3.01684   AATTAGTTATATACA    GGAGAGTGTATGCCGG ACAGG CCACCATACACTCCCC    ATCCTCCTATATACT 100 39
LQRI_RS08860 NONE
LQRI_RS08855 NONE
        fliM NONE
        fliY NONE
LQRI_RS08840 NONE
LQRI_RS08835 NONE
        fliP NONE
        fliQ NONE
        fliR NONE
        flhB NONE
        flhA NONE
        flhF NONE
LQRI_RS08800 NONE
LQRI_RS08795 NONE
LQRI_RS08790 NONE
LQRI_RS08785 NONE
LQRI_RS08780 NONE
LQRI_RS08775 NONE
LQRI_RS08770 NONE
LQRI_RS08765 2026064 .. 2026078 -  -2.2  -3.08465   ATTTATATATATATA               TAAATT TGA AACTTA               TTGTTTGTCGTCCTT  42 23
LQRI_RS08760 NONE
LQRI_RS08755 NONE
LQRI_RS08750 NONE
LQRI_RS08745 NONE
LQRI_RS08740 2021895 .. 2021915 -  -6.2  -5.86976   GCACAAAATAAAAAA            GAGCTTAA ATTTA TCAAGCTC            TTTTTTAATCCCTGT 100 76
LQRI_RS08735 2020885 .. 2020899 -  -2.2  -3.38725   AATCCTCAACAAAAG               TATATC ATA AATATA               AATATCATAAATATC  46 63
        thpR 2020166 .. 2020176 -  -2.6  -2.95404   TATTAAAATTAACCA                 TAAT CAG ATTA                 GAAAAAACTAAAGTA  42 83
LQRI_RS08725 2018684 .. 2018708 -  -8.8  -3.01712   TTTTTTTCCTTAATA          TATTGTACAA ATATA TTGTACAATA          AGTAAAATACAAAGG  72 214
        pflB NONE
        pflA 2015513 .. 2015547 - -11.8  -5.47159   TGGTAATAGAAAAAA     GCAAATAATAAAAG AAAAAAG CTTTTATTATTTGC     CTGACAGAATCCTCT 100 18
LQRI_RS08705 2014143 .. 2014172 -  -8.9  -5.64421   AGTTTAAATAAAAAA       CTATTACAACAATT TTT AATTGT-GTAATAG       TTTTTTATTGTTTTC 100 60
LQRI_RS08690 2011014 .. 2011048 - -11.7  -5.33405   CGCACCAAACAAAAA     GAAAAGCCTTGAA GTTTTAAGT TTCAAGGCTTTTC     TTTTTGTCTTCCTTT 100 7
LQRI_RS08680 2010607 .. 2010632 -  -9.1  -6.23317   ACAAAAATAAAAAAA         CAAGGATTCCA TTAT CGAAATCCTTG          GTTTCTTTTATCTGG 100 38
        tnpA 2009870 .. 2009888 -   -16  -3.65135   TTTAAACAATCATAA             CCACCGGC TCA GCCGGTGG             TTTGCTCTAGCCCTA 100 126
        tnpA 2009138 .. 2009156 -   -16  -3.64882   TAATAATAATCATAA             CCACCGGC TCA GCCGGTGG             TTTGCTCTAGCCCTA 100 126
LQRI_RS08665 2008305 .. 2008323 -  -4.6  -3.01791   ATTTGTTGTCCAATA             TAAAGCCA ATT TGGATTTA             TTCCCGGATTTGCTG  50 339
LQRI_RS08660 2007509 .. 2007525 -  -3.7  -2.84794   CTAATGCCACAATGA              TAAATCC GGG GGATATA              CATCAAATATTGTCC  45 126
LQRI_RS08655 2005772 .. 2005783 -    -3  -4.15044   CCGGCTCGCAATAAA                TTGT ATCA ACAA                 GACTGTACTTTTCTT  55 125
LQRI_RS08650 NONE
LQRI_RS08645 2004323 .. 2004339 -    -3    -3.646   TTGAAGCATAGATAA              TGCATA AATTA CATGCA              TTTATAGATGATGTA  50 245
LQRI_RS08640 NONE
LQRI_RS08635 2000421 .. 2000433 -  -4.1  -2.69799   TTATCTTATATACTA                TTCCC CTC AGGAA                GAATGCTTGCTTTAT  46 80
LQRI_RS08630 2000063 .. 2000082 -  -7.9  -5.64274   CCAGCCATAAAAAAA            GCATGGT TACTTG ACCATGC             CAAAAACTAAAACAA 100 56
LQRI_RS08625 1998064 .. 1998090 - -17.4  -2.74605   TCTCCTTAAAATTCA         GGGACTTTAGCC AGC GGCCAAAGTCCC         CTTTTTTCCACCGTT 100 51
LQRI_RS08620 NONE
LQRI_RS08615 1996342 .. 1996356 -  -3.6  -2.88631   AAAATAACAAAAACG               TCACTT AAG AAGTAA               ATGTATCAGACAACT  45 31
LQRI_RS08610 NONE
LQRI_RS08605 1992905 .. 1992925 -  -8.9  -5.63645   TCAAAACATAAAAAA            GCCGGCCCA TTT CAGACCGGC            TTTTTAAGTATTTAA 100 67
LQRI_RS08600 NONE
LQRI_RS08595 1990768 .. 1990785 -  -2.5  -3.44848   CTTCTGCACGAAACA             CCGGTGC ATAC GTTCCGG              CAGCATTTGTGCCAA  46 51
LQRI_RS08590 1988094 .. 1988123 - -11.5  -5.42605   GCAATAAAAATAAAA       GCTGCCGCAAAAA GCAA CTTTCGCAGCAGC        CTGATAATTGTTATT 100 55
LQRI_RS08585 NONE
LQRI_RS08580 1986530 .. 1986543 -  -2.5  -4.06502   CATCCTTAAACCAAA               TAATA TATT TATTA                TTATTCTACTTCATC  53 31
LQRI_RS08575 1986017 .. 1986031 -  -7.2   -3.6215   GCAACTTATTTCAAA               TGCAAA TCA TTTGCA               TTTAATTTGATTATA  70 81
LQRI_RS08570 NONE
LQRI_RS08565 NONE
LQRI_RS08560 1983218 .. 1983248 -    -7  -3.66556   AATTTGTCAAGACAA       TTTTAGCACTCA TTTAAGG TGAGTGCTAACA       AAAAATTTAAATATA  67 72
        htpG 1981080 .. 1981134 - -13.5  -4.66535   AACTTGCAAAATAAA TGTTTATAAAAATGTCCTTCGAAA GCTTTATT TTCCGAAGGACATTTTTATAAA-A TCTTACTGAAATCCT 100 114
LQRI_RS08530 1973627 .. 1973643 -  -2.3     -3.94   TTAATTTTTAAAGAA              TACCAAA TTT TCTGATA              ATCCAGATTTCTTTC  50 258
LQRI_RS08525 1972298 .. 1972344 -   -14  -4.11664   TGTATAATAAGCAAA CAACTAAAAATCCTGGCAGC CTAATCC GCCGCCAGGATTTTTAATCA TACAGCATTACAGCA 100 33
LQRI_RS08515 NONE
LQRI_RS08510 1968434 .. 1968457 -  -3.1   -2.8626   AATAAAACTCAATTA          CAGTTTCCT AAAGAA AGGAATCCG           GCATGGATAAATCCA  43 177
LQRI_RS08505 1967450 .. 1967475 - -10.5  -4.47328   AACGGCATCATAAAA         GGTGATCTGCA AAAC TTCAGATCACC          TTTTTTTACGTTACC  95 90
LQRI_RS08495 NONE
LQRI_RS08490 NONE
LQRI_RS08485 NONE
LQRI_RS08480 NONE
LQRI_RS08475 1961629 .. 1961656 -  -5.6  -5.34381   AAAGCCAAATAAAAA        GCCAAAGATACC CTTT AATATCCCTGGC         TTAATACAAATTCAA  84 111
        priA NONE
         def NONE
         fmt NONE
LQRI_RS08455 NONE
LQRI_RS08450 NONE
        rsmB NONE
        rlmN NONE
LQRI_RS08435 NONE
        pknB 1950596 .. 1950621 -  -2.5  -4.09243   TATACCTCCTTAAAA         CTATCC-TGCAG CTT CTGCATGGTTTG         TTTCACCGGACTCTT  53 0
        rsgA 1949595 .. 1949613 -  -3.3  -5.72622   TTTACAAACAAAAAA             TATATAT GCCAA ATATATA             CCAAAAAAATAGCTT  84 104
         rpe NONE
LQRI_RS08415 1948165 .. 1948187 -  -9.2   -5.3671   AAGATAATCAAAAAA           GAGAAGAGTT CAA AGCTCTTCTC           TTTTTTTACAGTTCA 100 58
LQRI_RS08405 1944741 .. 1944767 -  -9.4   -4.7889   ATAAAGACTTAAAAA         GGCTTCCGGC AGCATTA GCCGGAAGTC         TTTGTCTTTTCTTAT 100 54
LQRI_RS08380 NONE
LQRI_RS08375 1937898 .. 1937923 - -10.5  -4.48073   GGAAAAAAATAATAA         GCAGAACAGGT AATA ACCCATTCTGC          CTTATAATCCTGGTG  95 36
LQRI_RS16380 1937602 .. 1937621 - -11.4  -5.22006   CTATTATAACAAAAA            GGGGAGGC AATT ACCTCCCC             TCTTTAGATTCTTAT 100 55
LQRI_RS08370 1932876 .. 1932890 - -11.4     -2.89   AGTTGTATAGAATTA               TGGGGC TCC GCCCCA               AACCCCGTCCTCACC  86 194
LQRI_RS15655 NONE
LQRI_RS08355 1929546 .. 1929573 - -14.2  -2.52543   ACCTCCTTTAATGGA        GGCACCTACTCC AGGT GGAGTAGGTGCT         TTTTCCATGCTATTC 100 57
LQRI_RS08350 NONE
LQRI_RS08345 1926289 .. 1926305 -  -2.2  -2.80579   GGTCTAAAATAATAG              GCAAGG CATTT CCTTGG              GGTGCAGACTTGGTT  41 368
LQRI_RS08330 1923101 .. 1923113 -  -4.9  -3.60151   CCTTGTAAATGACAA                GAAAA TAC TTTTC                TTACTGAGTACTCTT  58 83
LQRI_RS08325 NONE
LQRI_RS08320 NONE
LQRI_RS08315 1920719 .. 1920729 -  -6.8   -4.0942   TAGGTACGATACAAA                 CCAC TTG GTGG                 CCATCAAAGACCACC  71 123
LQRI_RS08300 1915658 .. 1915672 -  -4.2  -2.94099   GTCTGTTATGACAGA               CCGG CTGCCTT CCGG               TGAGGACGGGGTTTG  47 59
LQRI_RS08295 NONE
LQRI_RS16220 1914327 .. 1914363 -  -8.1  -3.44982   CCAATTAAAAAATTA    GGAGGACAATTGC TAATTACCCGG GCAATAGTCCTCC    TCTGTCATTCACCAT  73 81
LQRI_RS08285 1913533 .. 1913552 -  -2.2  -4.94962   ATAATTGAAATAAAA            TTAACATA AAAT TATGATAA             AATCGGCCCGTCGGA  65 108
LQRI_RS08280 1912241 .. 1912295 -  -7.5  -4.45083   TTGACAGTTAGAAAA TTTAAAGTCTGAAGGCAGAAAGACCAA TTT TTCGTCATT--GCCTTCAGACTTTATA ATTTTAGGCTCGTCC  82 44
LQRI_RS08270 NONE
        yihA 1909452 .. 1909473 - -13.1  -5.35354   CATAGAACTAAAAAA           CGCTTATCC CGAA GGATAAGCG            TCAATAAGCTAAAAA 100 206
        thiS NONE
LQRI_RS08255 NONE
        thiH NONE
        thiF NONE
LQRI_RS08240 NONE
        thiC 1904028 .. 1904046 - -10.3    -4.258   CCAGGTATTAATAAA             CAAGGGG TTATC CCCCTTG             CCCCCTTGATTTTTC  95 69
LQRI_RS08230 1903062 .. 1903082 -  -3.3  -3.66166   TCGGCAAAAAACATA            TGGACATTG AGT CAATATCTA            ATTTATATTTCTCTG  52 28
LQRI_RS08220 1901623 .. 1901641 -  -8.9  -4.62069   TCTGCACTTTAAAAA             GCTCCTT CGAGT AAGGAGC             TTTTCTCGTAAATTC  90 71
LQRI_RS08215 1899166 .. 1899193 -  -4.4  -3.02186   ATACTCTATAAATTA        TAACAAATAAAC CGTG ATTTATTTATTA         TTTAAACTGTTAAAT  50 103
LQRI_RS08210 NONE
LQRI_RS08205 NONE
LQRI_RS08200 1895892 .. 1895916 - -11.4   -5.1675   TGATTTATTAAAAAA          GCCTCCCGCC ATAAA GGCAGGAAGC          CTTTTATAAATCTCT 100 73
        hisC 1894581 .. 1894597 -  -2.4  -3.22777   TTCTACACACGAACA              TTTTTA CCTTT TAAAAA              AATGAATTTTTACAA  44 62
LQRI_RS08190 1892838 .. 1892862 -    -3  -5.82388   AAAGGGCAAAAAAAA          TAAAGAAG AATTTTAAA CTTCTTTA          TTTTTTTACATAACA  81 61
LQRI_RS08185 1891140 .. 1891165 - -11.2  -4.38116   GCCATAAAAAGCAAA         GCAGCCGAAA AGTAAA CTTCGGCTGC          TTTTTCAATATACAA 100 90
        iorA NONE
LQRI_RS08175 NONE
LQRI_RS08170 1887194 .. 1887214 -  -3.9  -2.64299   CAACAGCTCAAATAG            CGAGCTTAG AAC CTACGCTTG            TCAATAACCCTCTTG  46 10
LQRI_RS08165 NONE
LQRI_RS08160 1885161 .. 1885192 -    -8  -4.91573   AAAAGACAGGAAAAA      GGGATCCTGCAGCTG CGG CTGCT-CAGGATGCC      CTCAATCTCAAATTT  86 214
LQRI_RS08145 1881835 .. 1881863 -  -8.3   -4.4874   CGCAAAAATTTAAAA        GCCTCAAATTC AATGTCA AAATTTGAGGC        TCTGTTTTTCTTTAT  85 49
LQRI_RS08130 1878941 .. 1878954 -  -2.5  -5.65177   ATATTTATAAAAAAA               TATTT ATAC AAATA                CCCAAATAAGAATTC  75 94
LQRI_RS08125 1873454 .. 1873476 -  -9.9  -5.46698   TTTAAAAGCAAAAAA           GGAGAAACC GCAAA GGTTCCTCC           TTTTTTGCCCGGCCT 100 86
LQRI_RS08120 1870786 .. 1870812 - -12.3   -5.3167   TAAAAATAAACAAAA         GAGCCGTCCTG TTTTT CAGGACAGCCC         GTACTCAAAGAGTAT 100 54
LQRI_RS08115 1869180 .. 1869192 -  -3.5  -4.44667   TTTTTCAATAATAAA                TAAAA AAC TTTTA                TATAACACAACTCTA  61 48
LQRI_RS08110 NONE
LQRI_RS08105 NONE
LQRI_RS08100 1865874 .. 1865898 -  -4.3  -3.48208   AGCTACACTAAAAAG          TACGTTAAAGA GCA TCTATATCGTA          AACCTCCTCTTCATC  54 5
LQRI_RS08095 NONE
LQRI_RS08090 1864003 .. 1864022 -  -5.2  -2.54325   TTTTTCTAAATATAT            TATTTTTA TATG TAAAAATA             TAACCAACGACTAGC  51 36
LQRI_RS08085 1863764 .. 1863774 -  -5.4  -2.57721   CAATTTATTAACCCA                 TCAG ATC CTGA                 ATTTTCTCCCACAAG  51 7
LQRI_RS08080 NONE
LQRI_RS08075 1862528 .. 1862583 -  -4.8  -3.78785   GGATAAAAACCATAA TGAAGATGATGATGAGGGCTGGTTTTA CCT TTAAACCTGTCCTCAT-ACCCTCATCA TAAAAACATTAATTT  60 34
LQRI_RS08040 1850326 .. 1850367 - -16.3  -4.24963   TATAATTATTCAAAA TAAGGAATATATCCGAATT TATA AATTCAGACATATTCCTTA  CCGTGGAAAAGGTAA 100 150
LQRI_RS08035 1849982 .. 1850005 -  -8.2  -4.43012   ACTCCAACACGAAAA          CGGCTTCA TTTAATCT TGAAGCCG           TTTTTGCATAAATAT  85 61
LQRI_RS08020 1848132 .. 1848144 -  -3.5  -3.89291   GCAATAGTATAATAA                TTATA TAT TATAA                GAAAAAAAAATCAAC  54 73
LQRI_RS08015 NONE
LQRI_RS08010 1844762 .. 1844777 -  -3.4  -3.54459   TCAAGCCTTCCCAAA              TTAATT CTGC AATTAA               TTCAGTGGCACAAAT  50 294
LQRI_RS08005 NONE
LQRI_RS08000 1841633 .. 1841655 -  -9.2  -4.53163   TTATATATTATAAAA           GCGATGGA GATTTCA TCCATCGC           TTTTGTTTAACAGTA  89 55
LQRI_RS07985 1839030 .. 1839044 -  -4.2  -2.82623   TTGCCCTCACAATCA               GCACTC AAT GAGTTC               TCCGGTTTTATGGTA  47 8
LQRI_RS07980 1838562 .. 1838596 -  -3.1  -4.19577   TAATCTCTAAAACAA    TATCCTCAATAC-TCT TGCA AGACGTATCAAGAATA     TATTTGCAGTCAATT  57 35
LQRI_RS07975 1837992 .. 1838006 -    -5  -4.04394   CTGAAATTAACCAAA               TGTTCC TGT GAAACA               AAACACCTCTTTGGA  62 2
LQRI_RS07970 1837291 .. 1837301 -  -2.4  -4.10855   AAAAGCTTTTTAAAA                 CCGC TAA GCTG                 GATAGAACTCCTTAT  53 40
LQRI_RS07965 1836899 .. 1836913 -  -2.2  -3.60048   CCTTCGTTAAAAAAT               TAACTA TAT TAATTA               TATACCAAATCTATA  47 109
LQRI_RS07960 1836393 .. 1836422 - -10.1  -5.69262   TCAGAAAAACAAAAA       CTCTTCGTGACCT ACAT AAGTCAGGAAGAG        TTTATAGACAAAACT 100 209
        hydG NONE
LQRI_RS07950 1833444 .. 1833454 -  -2.6  -4.13973   ATACATGATAAATAA                 TTAT AGC ATAA                 TAGTTTTTAGATTTC  53 118
        pilM 1832018 .. 1832039 -  -5.9  -5.74684   TAATAAAAATAAAAA           CTCCAGT GAACAAAA ACTGGAG            TTTGCTGTAAACTTC  95 120
LQRI_RS15925 1831658 .. 1831696 -  -7.7   -3.0693   TTGGAAATCAAAGTA   TATACCCGGTATT GGAAAACTTGGAT AATACCGGGTATA   ATATATGTTTAATTT  67 34
LQRI_RS07935 1830018 .. 1830031 -  -2.3  -4.33907   TACAAATACGCAAAA               GGAGA TAAT TCGCC                TATGGCTTTTCTTCC  59 249
LQRI_RS07925 1826919 .. 1826934 -  -5.4  -4.70659   CGCTATACTTAAAAA              CAGCAT TCCC ATGCCG               TTTATTGGTATAACA  71 177
LQRI_RS07920 1824926 .. 1824947 -    -8  -4.87626   TGCTAATATGAAAAA           TCCCCAGG ATTGGA CCTGAGGA            TTTATTTTTTTATAT  90 244
LQRI_RS07900 1823024 .. 1823043 -  -7.9  -5.68039   AAAGTCATAAAAAAA            GAAGTGC CAATAC GCACTTC             TTTTTGGAGCTTTTT 100 40
        hflK NONE
LQRI_RS07890 NONE
LQRI_RS07885 NONE
LQRI_RS07880 NONE
LQRI_RS07875 NONE
LQRI_RS16055 NONE
LQRI_RS07870 1815326 .. 1815363 - -10.7  -4.17048   GGTTTTTTAAAATAA   GCAACAACGCTCCTT GCTGATTT AAGGAGAGTTGCTGC    TTTTTTTATTGTTTA  95 9
        proC NONE
        rnhA NONE
LQRI_RS07845 1812098 .. 1812123 - -10.7  -6.55664   GAAAATAAAAAAAAA         TTACAATACAT CAAA ATGTATTGTAA          ACTTTACTTAAAATA 100 138
      spoIIM 1811041 .. 1811051 -  -2.6  -4.11216   TTTTTATTCGCAAAA                 TTTA TTT TAAA                 TATAAAGTTTTTACA  53 342
        xerD 1810042 .. 1810063 -  -8.7  -4.63952   AGGATAAATAAGAAA           GGCAGGATG TCTT CATCCCACC            TTTTTATTATATTAC  89 89
LQRI_RS07830 NONE
LQRI_RS07825 1807383 .. 1807400 -  -2.7  -3.02461   TAACCTTTCTCAACA             CTTAAAG ACCC CTCCAAG              CATTTATCATCAATA  43 100
LQRI_RS07820 NONE
LQRI_RS07815 1805162 .. 1805174 -  -4.1  -2.62263   ATTTTTTTTACAGCA                CTGCA ATT TGCAA                TCAGTTTTTCTTTAT  46 153
LQRI_RS07810 1803529 .. 1803574 - -17.8  -4.85599   TCTATTGTATAAAAA TGTGCCCCGCACAGGTTTTA CTCTTC TAAAACCCGTGGGAGGCACA AGCTAAAAAGCGGCA 100 42
        lysA 1800688 .. 1800711 -  -3.9  -5.80248   GAATATATAAAAAAA          GAGCACA AAATTTGAAA TGTGCTC           TCGTTTTATAATTTT  86 58
LQRI_RS07795 NONE
LQRI_RS07790 NONE
        trpS 1796000 .. 1796012 -  -2.7  -3.17146   GCTTTTGACAACACA                CTTTC CAA AAAAG                TTCACCACCTTTTAA  43 59
LQRI_RS07780 NONE
        scpB NONE
LQRI_RS07770 1793936 .. 1793952 -  -5.2  -5.98675   TATAAAAACAAAAAA              TACACA TAAAT TGTGTA              TTTTTCCGCAGCAAT  95 70
LQRI_RS07765 NONE
        ytfJ 1792737 .. 1792751 -  -7.1  -5.38958   ATTTATAAAGAAAAA               GTGGG TTTTT CCCAC               TTATTCATTCTCATC 100 26
LQRI_RS07755 1791693 .. 1791713 -  -2.7  -3.71917   ATTTTAAATTGGAAA            TAATGTTTT GTC AAAAGATTA            TTAAAATCGTCTTGT  48 147
        speE 1790776 .. 1790789 -  -2.5  -2.91807   TCATCAAATTCAAAT               TAAAA ATTA TTTTA                TTAATTCTTTTGCAA  42 18
        speB NONE
LQRI_RS07740 1789216 .. 1789240 -   -13  -3.71672   TTGCATCAAAAGCAA          TTTAAGGGGC AACAA GCCCCTTAAA          TATTTGCCTGTATTT 100 92
LQRI_RS07730 1786581 .. 1786593 -  -6.3  -3.39803   CATCCATACTTATAA                TGGAA TAT TTCCA                TGCTTTTTGGCAGGT  62 7
LQRI_RS07725 NONE
LQRI_RS07720 1785836 .. 1785847 -  -5.8  -3.61398   CCTTTTTGGGAACAA                CCAC AAAA GTGG                 TTTAATCCATTACGT  62 130
LQRI_RS07715 1784318 .. 1784342 -  -6.5  -5.27399   GAATACAGCAAAAAA         CTCAGGCACC ATGTCA GGT-CCTGAG          TTTTTTATTTTGAAT  84 94
LQRI_RS07710 1783567 .. 1783581 -  -5.8  -2.69057   CTTCAAACATAATAC               CAAAAA TAA TTTTTG               TTTTCAAGGTTTTTA  55 74
LQRI_RS07705 1782876 .. 1782901 -  -9.9   -2.8552   CCGTATTCAGGAAAT         TGTAGAGCA-GA ATT TCATGCTCTACA         CAATGAGACTTGGGG  71 394
LQRI_RS15640 NONE
LQRI_RS07695 NONE
LQRI_RS07690 NONE
LQRI_RS07685 1779405 .. 1779415 -  -5.4  -4.18494   CAGCTTTACGCAAAA                 TCAG CAG CTGA                 CACCTGCAAGATAAC  66 15
LQRI_RS07680 NONE
LQRI_RS07675 NONE
        aroH NONE
         cmk NONE
LQRI_RS07660 NONE
LQRI_RS07655 1774246 .. 1774268 -  -7.7  -4.62957   ATAAGCAAACGAAAA           GCCTGCTAC GTTTT GCAACAGGC           TTTGAAAGCAATTTA  82 107
        speD 1773578 .. 1773605 - -12.9  -3.88029   ACGGTATATAAAACA        TAAAAGCGTGC ATACCG GCACGCTTTTA         AAGATCTATTTTAAC 100 43
         ndk NONE
LQRI_RS07640 NONE
LQRI_RS16050 NONE
LQRI_RS07635 1771435 .. 1771450 -    -4  -2.72477   CACACAATTAGATTA              GCACTT TGTG AAATGC               TTGTCAATATTTTTG  46 104
LQRI_RS07630 1770854 .. 1770868 -  -4.4  -3.35438   TAGTATAGTTTAGAA               TAAATT TTT AATTTA               TTTTAATTTATTTAT  52 105
        nifS NONE
        nifU NONE
        mnmA 1767763 .. 1767793 - -10.5   -5.7946   GGTTTAATAAAAAAA       GCTTTTTCGCCCT GCTTA AGGACGAGAAAGC       TCCCGTGGTACCACC 100 318
        tyrS 1766382 .. 1766407 -  -9.8  -4.34993   TAAACATTAAAAGAA         GCTTAGAGGC ATGCAA ACCTCTAAGC          TTGTTTTCTATGTCT  91 51
LQRI_RS07600 1763496 .. 1763513 -  -5.6  -5.60993   GTGGTGATAAAAAAA             GAAGAG TATATG CTCTTC              TTTTTAATCCAAATA  87 76
LQRI_RS07595 1761890 .. 1761942 - -13.8  -4.80487   TATAAGTAAAATAAA TGACTCACAACATAAAC-CTTTCAA AAGT TTGAGAGAGTTTGCGTTGTGAGTCA TTATTTTTATTTGAT 100 32
LQRI_RS07580 1757770 .. 1757819 - -15.3   -3.1211   TATTATATTACTTAA TCATACATAAGACAACAGTCTGT ATAA ACAGGCTGTTGTCTTATGCATAT TTATTTCGGTATGGC 100 114
LQRI_RS07575 1756948 .. 1756958 -  -2.6   -5.7946   GTTCCAACAAAAAAA                 TAAA AAT TTTA                 TATTACAGTTTCAAT  79 85
LQRI_RS07570 NONE
        aroC 1755123 .. 1755138 -  -4.6  -2.99541   ATTAGGATTATAAAC              GGTCCC AACG GGGATC               TATGTTGCTGCTGAT  50 2
LQRI_RS16375 1745503 .. 1745537 -  -9.3  -4.78839   AAGGCGATAATAAAA     TAAAAGCTTAGGGGC GAAAA GCCCCTTTGCTTTCA     GCTATTTGCTTCGGG  93 224
LQRI_RS07530 1742893 .. 1742905 -  -6.3  -4.25325   AGATAACAAATGAAA                GAGAT ATT ATCTC                AATAGAGAAAATAAC  71 464
LQRI_RS07500 1733041 .. 1733063 - -11.3  -5.67283   AACGTAAATAAAAAA           CCCAGGGAC TTTTT GTCCCTGAG           TTTTTTATTTGTGGT 100 133
        lexA 1709452 .. 1709470 -  -4.7  -4.02817   CTTGTAGAATAAGAA             TAACAAA ATAAA TTTGTTA             ATAAAATTTTAAGGT  62 482
LQRI_RS07295 1693087 .. 1693109 -  -9.1  -3.43447   AAAATAAAGTAAAAG           CTCCAGTGC ATAAA GCCCTGGAG           TTAAAATTAGAAATT  78 39
LQRI_RS07225 1675662 .. 1675678 -  -2.9  -2.94872   TTTAAACATATTACA              GTGCCTC CTT AAGGCAA              TAGCCCCTTGCTCTT  43 4
LQRI_RS07220 1674186 .. 1674218 - -15.8  -3.49182   ATATAGTATAATCAA     GGGGTTCAGGGAAAC TCTG GTTTCC-TGAACCCC      CCTGTAATATTTTAT 100 251
LQRI_RS07205 1670954 .. 1670972 -  -2.4   -4.0098   GCTTAACCTAAATAA             TACCTTTA TAA TGAAGGCA             AGTACTATAATAACA  53 72
LQRI_RS07200 1670203 .. 1670229 -  -9.5  -3.65604   AATAGCATATAAAGA         CAAAAGGGGAA GCAAA TGCCCCTTTTG         TTCGGTTTGCTATTT  82 35
LQRI_RS07135 1649828 .. 1649846 - -10.2  -3.83502   TAGGGTTAGAGCAAA             CCACCGGC TGA GTCGGTGG             TTATAATTCAGCCTC  87 82
LQRI_RS07105 1640852 .. 1640882 - -11.8  -4.14392   GTTTAATCGGTAAAA       GAGCCCTGTGGCAA AAA CTGCCGCAGGGCTG       TTTTTATCAATTCCG 100 69
LQRI_RS06940 1611801 .. 1611820 - -12.2  -5.35222   AAAACGTATAAAAAA            GCAGGTGA GTAA TCACCTGC             TTTCCAAAAACAATA 100 47
LQRI_RS06935 1611016 .. 1611026 -  -2.4  -3.57651   TGTTACATCATACAA                 CTCC ACT GGTG                 TACAACAACCCAGTA  48 60
        floA 1609958 .. 1609969 -    -3  -2.72144   GGACGGCGGTGAAAC                GTTA AACC TAAC                 TATTTTTTGTCAGAT  42 25
LQRI_RS06925 1609285 .. 1609313 -  -8.9  -4.40561   GTGTTGCAAAAACAA        GTAAATCCGGG AATTTCA CCCGGATTTGC        TTTTGTATTTTACGC  89 81
LQRI_RS06915 1607090 .. 1607100 -  -2.6  -3.76413   TTCCAAAACTCTAAA                 TATA ATT TATA                 CAAAGCAGTCGAATT  48 139
LQRI_RS06910 1606563 .. 1606589 -  -3.6  -5.24416   GAATTATAAGAAAAA         GGCGCATCAACA AAA TAATGAAACGCC         TTTTTTGTTATTGCT  72 155
LQRI_RS06905 1604288 .. 1604310 - -10.6  -3.96224   GAAATCATTGATAAA           GCCCTCCT TATTGAG AGGAGGGC           CTTTTTTTGATTGTT  91 85
LQRI_RS06840 1592635 .. 1592645 -  -2.4  -4.67641   ATTTTAAAATTAAAA                 GAGG AAT CCAC                 GAAACAATATTATAT  60 73
        ychF 1591118 .. 1591134 -    -3  -3.02371   CGTTGGAAAGAAGGA              TGACAA GCTAA TTGCCA              TTTTGGATTTGAGCG  43 341
        aroF 1588617 .. 1588649 -  -7.8  -3.19706   AAAGACAATAAATTA      GCTCGAAAGACA TCTAACTTT TGTCTTACGAGC      TTTTTTGATTTTGTT  69 109
LQRI_RS06810 1585451 .. 1585463 -  -3.3  -4.16921   GAACAACCTGGAAAA                GCAGT TTG ACAGC                CGTATTCTTGTGGTG  59 325
LQRI_RS06770 1577977 .. 1577997 -  -8.3  -4.84363   GTAAATTATCAAAAA            CACCAGC TTACATG GCTGGTG            TTTTTGCTTGCGTAA  90 67
LQRI_RS16040 1575391 .. 1575424 - -12.1  -3.14468   GCCCACCATAGGGAA     TAAAATCAGGAAGTAT GAA ATACT-CCTGATTTTA     TTTTTTTGTCTCCAA  89 23
LQRI_RS06715 1568415 .. 1568459 -  -5.8  -3.45839   ATGGGGAAATATGAA GGTTAAGAATTGGGGAATCC TTTTT GGATTGTTCAGTTCTTAACC TTTTTCTGCAATAAA  61 20
LQRI_RS06645 NONE
LQRI_RS06640 NONE
LQRI_RS06635 1548003 .. 1548031 -  -4.7  -5.14163   ATGGAGTAATAAAAA       GCGGGAAAAGCTT AATAA AAGCTT--CCCGC       TTTTTAAAATCCGGA  79 51
LQRI_RS06610 1537233 .. 1537247 -  -4.2  -2.94099   GTCTGTTATGACAGA               CCGG CTGCCTT CCGG               TGAGGACGGGGTTTG  47 59
LQRI_RS06600 1534665 .. 1534693 -  -8.9  -3.12253   TATGAATATAAAGGA        TAGACAGGGGGAT GGA ATTTCCCTGTCTA        TTATATATTATATTT  74 59
LQRI_RS06420 1497043 .. 1497064 - -10.1  -5.18715   ATAAAAACAATAAAA           GGGGTAGCC TAAT GGCTACCCT            GATAAACGTGGTTTT 100 12
LQRI_RS06395 1490660 .. 1490675 -  -3.4   -2.6834   ATTATTATAACTAAT              TTATTA TATT TAATAA               TAGTAAAAAAGTACT  44 68
        dapA NONE
        dapB NONE
LQRI_RS06380 1488379 .. 1488407 - -11.8  -2.92215   TTAATCAGAAAATAT        TTTAAGCGGGGA ATAAA TCCCCGCTTAAC        TAAATCAATGATTTT  88 39
LQRI_RS06370 NONE
LQRI_RS06365 1486769 .. 1486785 -  -4.4  -6.20267   TTAAAAATAAAAAAA              GAGGAA CGTTT TCCCTC              TTCTTTGTTCATGGT  95 37
LQRI_RS06355 NONE
LQRI_RS06350 1482202 .. 1482241 - -10.8  -2.98387   GCGTATAAAATATTA  CAGGGGGGTTCAGGAAACC AGA GTTTCCCTGAACCCCT-TG  ATTATACTATATACG  83 32
LQRI_RS06345 1481713 .. 1481755 -  -3.5  -5.59502   GAAAAAAGCAAAAAA GCCCTTTTTCCCGAT AATGAAAACGGCA ACCGGGAAGAAAGGC TTTCTTATAAGGTCA  79 38
LQRI_RS16035 1463322 .. 1463341 -  -6.4  -3.66874   GTAAGCGGAGTGAAA            GGGAGG TTAAGATG CCTCCC             TGTTTATCTAAGCCT  64 29
        typA NONE
        mltG 1437334 .. 1437359 - -10.6  -4.91109   TTGGGATTATAAAAA         TGTGAGGATT GTGTAA AATCCTCACA          ATAATTTTTTCATTT 100 85
LQRI_RS06150 NONE
LQRI_RS06145 1435162 .. 1435185 - -10.4  -5.47399   CTAATTGTAAAAAAA          CTGAAGCTCA TTAT TGAACTTCAG           TTGGCAGCATTTTGC 100 202
LQRI_RS06140 1433351 .. 1433379 -    -4  -4.16842   GGCACCTCCAACAAA       TTGGCTACCT-TA TAAA TATATGTAGCCAA        AATGTTTAAGGTGCC  60 55
        sigK 1432494 .. 1432507 -  -3.9  -4.07746   TTTTCAAAAATATAA               TATCA GGAA TGATA                AAGCATAAGAATCTC  59 138
LQRI_RS06120 1428165 .. 1428182 -  -4.2  -3.11584   ATACCATTGAACAGA             TGCAAT ATCGAA ATTGCA              GGTGTGAAGAATGAA  48 163
        rpsT 1400858 .. 1400885 -   -13  -3.34517   AGCGTGCCTTAAATA        TAAAAACGTACT TTCC AGTACGTTTTTA         TTGTTGTTTGAGGGC 100 23
LQRI_RS05985 NONE
LQRI_RS05980 1399362 .. 1399376 -  -2.2  -2.94739   AACTTTAAAACATTA               TTACAA CAT TTATAA               AATTCAACTGAAAAT  41 42
LQRI_RS05975 1399224 .. 1399247 - -15.4  -4.24887   AACAGATGTAATAAA          CGGTTGGAGT TCAT ACTCCAACCG           TTTTTTTGGTGGAGG 100 32
LQRI_RS05960 1396615 .. 1396648 - -18.5  -4.78848   CTTTTAAACAGAAAA     TTAAAATAGCCTGCA TTTC TGCAGGCTATTTTAA      TTACCCTGATGTCAG 100 56
LQRI_RS05955 NONE
LQRI_RS05950 1395841 .. 1395851 -  -2.4   -3.1478   ATTACCGGAGGAAGA                 GTCG TTC CGTC                 ACTCTGGATTAGGCT  43 80
LQRI_RS05945 1395141 .. 1395161 -  -7.1  -4.07786   TATAAAATTTATAAA            TTATTAATA ATT TATTAATAA            GTTTTTAAAAACTCT  74 252
LQRI_RS05905 1384764 .. 1384803 - -19.7  -3.74361   TATATTTATCAATAA  TGAAAGTTCTCCTTTTC ATAAAA GAAAAGGAGAACTTTCA   TATATCTAGTGTTTT 100 23
LQRI_RS05900 NONE
LQRI_RS05895 NONE
LQRI_RS05890 1379757 .. 1379792 - -12.7  -3.19513   AGAATCTTAAGTTAA    GAGACTGTAGAGGCT TAAAAG AGTCTCCACAGTCTC     TTGACAAATCGTAAA 100 55
LQRI_RS05790 1358917 .. 1358932 -    -4  -2.76823   AATGCTGAAAAAATC              GGAGCAA ATT TTGC-CC              TTAAGATTGTGAATA  46 44
LQRI_RS05785 1358358 .. 1358373 -  -5.4  -4.48987   TCTGCAGAATTAAAA              GCGAAA GTTA TTCCGC               TGAATTTGCAGAAGA  73 149
LQRI_RS05775 1355219 .. 1355240 - -12.3   -5.4756   AATTTTAATAAAAAA           GCAGGGAGA TTGT CCTCCCTGC            CTGATTTTAAAACTT 100 66
LQRI_RS05770 1354577 .. 1354590 -  -5.3  -5.62288   TCAATAAAAGAAAAA               GTCTT TTTC AAGAC                TTTTTAAACAACATC  87 39
LQRI_RS05765 1354143 .. 1354170 - -12.1  -2.96808   AAATGAAAAAAGTTA        TGGAAAGAGGG GGAAAA CCCCCTTTCCA         GGAAAAAGCCGATTA  88 38
LQRI_RS05760 NONE
LQRI_RS05755 NONE
LQRI_RS05750 1350603 .. 1350620 -  -2.7  -3.17598   ACTTTCATAAAATCA             CTTCCCT TGTC AAGAAAG              CCGAAATCTGTGCTT  43 72
LQRI_RS05745 1349200 .. 1349251 - -14.6   -3.7956   CAAAGAAGTGAATAA GCCATAAAACGCGCAGAACTGCAA TAAG CTGCAGTTCTGTGTGTTTTACTGC CTGTGGAGTGGTTTG 100 383
LQRI_RS16030 NONE
LQRI_RS05550 1301606 .. 1301616 -  -5.4  -2.66899   TTGTAAGGAAGGAAG                 CCTT TAC AAGG                 TATTTTGAATACAGG  51 168
LQRI_RS05540 NONE
LQRI_RS05535 1298656 .. 1298695 - -19.5  -2.62184   CTCTTTGTGATAGCA  GCGAAGCCTGCATAAAG GTCCTT CTTTATGCGGGCTTCGC   TGTTTTAAGCGATTT 100 381
LQRI_RS05475 NONE
LQRI_RS05470 NONE
LQRI_RS05465 1283264 .. 1283288 -  -5.1  -4.07568   CTCTTGTTTTGAAAA          CTGCTTTGAAA TAC TTTGAAAACAG          TTTTTCTGCAAAGTA  62 151
LQRI_RS05460 1282533 .. 1282543 -    -4   -4.0348   ACACCACAGTATAAA                 TGAT TTT ATCA                 AAAAAAACGGCCTTC  59 290
LQRI_RS05445 1279204 .. 1279243 - -10.8  -2.98387   GCGTATAAAATATTA  CAGGGGGGTTCAGGAAACC AGA GTTTCCCTGAACCCCT-TG  ATTATACTATATACG  83 32
LQRI_RS05370 1259361 .. 1259397 -   -13  -4.20516   TGCGGATTCAATAAA    TCCGCCACTTCCTGCA GCTCT TGCAGTAAGCGGCGGC    AATTTTAAGCCATGT 100 56
LQRI_RS05360 1256719 .. 1256733 -  -4.3  -3.37198   CTGCTATACATAATA               TTCTG AAAAG CAGAA               TTATGTTACTTTAAT  52 40
LQRI_RS05355 1256002 .. 1256032 - -18.6  -4.13343   ATAAAGTTTTGAAAA       TAAACCCTGTTTTC GAA GAAAACAGGGTTTA       TTTTAGATGTGGGGG 100 85
LQRI_RS05340 1252379 .. 1252401 -  -2.6  -2.76046   GGAATGGGAATAGGA           GGCGGAGCAA TTC TTATTCCGGC           TTTGGTATTCTTTGT  42 371
        clpS 1251283 .. 1251298 -  -4.8  -2.98823   GTCCCTTTACAGATA              CAAAAA TCAT TTTTTG               CTTATGTAAGAAATA  52 48
        clpA NONE
         aat 1248197 .. 1248216 -  -2.2  -2.50622   ATACATCCTACCAAC            CTTTTAAA GTTA TTTTAAAG             ATTTTAATTATTTCG  39 29
LQRI_RS05310 1246769 .. 1246782 -  -3.1  -2.62184   TGTTGGTCGACAGTA               TGAAG GTTA CCTCA                GCTTTTAAAAAGGCG  43 331
LQRI_RS05245 1226802 .. 1226826 -  -7.3  -4.01992   AACATTAAAACAGAA          GCTTTGTAA CGATATT TTACAAAGC          AAATTGCAAAAAGTT  74 178
LQRI_RS05240 1224922 .. 1224954 -    -2  -5.03227   AGAGCATAAATAAAA     GCCTCAGCCGGAATA GTAT TA-TAAAGCTGAGGC      TTTTGATCTTTTACT  65 54
LQRI_RS05235 1224091 .. 1224103 -  -3.3  -2.75069   TGTATCAAATAATAT                TCTGC TGA GCCGA                TGGCCAGCTTTTTTG  44 47
LQRI_RS05230 1223005 .. 1223021 -  -3.7  -3.71527   CTTGAAGCATTTAAA              GATTTCT CCG AGATATC              GCCTTACGCTGTGGA  54 264
LQRI_RS05190 1190200 .. 1190249 - -14.7  -2.95116   GCACTATCGAAAGGA TATAGGA-AAAAAGTAGGAGAGCA TAA TGCTCTCTTACTTTTTATCCTTTA AATACTTTCTTGCTA 100 38
LQRI_RS15630 NONE
LQRI_RS05140 1176180 .. 1176213 - -10.5  -4.52589   TTGGTGCAGATAAAA     GGTAATGCCGAAGTAT ATA AAACTTCG-CATTACC     TTTTGTTTAATTTAA  95 304
LQRI_RS05070 NONE
LQRI_RS05065 1153414 .. 1153445 -  -6.7  -5.10163   AAGTTGAAAATAAAA      CAAGGGATATATG CAAAGC CATATACCCCTTT       CATTGATGTGTTTTT  85 73
LQRI_RS05060 1151139 .. 1151184 - -13.7  -4.05561   TAATAAATAAAAAAT TG-ATTTTATACCCGGGCAT GGTTTTT ATGCCCGAGTATAAAATGCA TCGTTTAAAAAATAT 100 72
LQRI_RS05055 1150281 .. 1150293 -  -4.8  -4.08767   TTTACCCTCCGAAAA                GTGC CCGTT GCAC                ATATTGAATATCTCT  62 94
LQRI_RS05050 1148747 .. 1148762 -  -7.6  -4.59773   TTGCAGTGCCAAAAA              CAGGTA CAAT TACCTG               ACTTTTAATCCAATC  82 82
        ylbJ 1146886 .. 1146896 -  -6.8  -4.62302   TAAGATTGCCAAAAA                 CCCT GGG AGGG                 ATAAATATGGAAATG  79 492
        rpmB 1143138 .. 1143173 -  -7.7  -6.07374   AGAAAAAATAAAAAA    GTGTATCACATTCTT TCTAAG AAGCATGTGGTACAC     TTTTTCGCTGTTTTT 100 70
LQRI_RS05010 1141518 .. 1141534 -  -4.3  -5.15634   CATCTTATGAAAAAA              TCCCTGC GAA GCGGAGA              TATAATTGCAAGGTA  76 355
LQRI_RS04965 1131120 .. 1131136 -    -8  -4.70921   GATAAGAGAAACAAA              CAAGCC CAGCT GGCTTG              ATGACAGCATACCCG  84 266
LQRI_RS04955 1128967 .. 1128993 - -10.1  -5.03994   TCTGACATAGAAAAA         CCGCCCGAAAG TTTAC CTTGCGGGCGA         TTGGGGAAACCATAG 100 58
LQRI_RS04915 1121142 .. 1121199 -  -6.9  -4.45201   TTGGACAAAAAAAGA CGGGCCGGGCTTTACAAACCGCCTTTT AATA AGATGTCATTTTGCAAAGCTTGGCCCG ATTTTACTTCATCGA  78 29
LQRI_RS04910 1119680 .. 1119713 - -10.4  -4.57837   ATAGCGTTTTAAAAA     GAGCCCGGCAGTA AGAAGAAAA TAC-GCCGGGCTC     TTTTGCTAAAATATT  95 137
LQRI_RS04885 1113146 .. 1113159 -  -8.1  -5.42198   TTTTAAAAAATAAAA               GGGCT CGAA AGCCC                AGCAATTGATGAAAA 100 60
LQRI_RS04865 NONE
LQRI_RS04860 NONE
LQRI_RS15625 1105152 .. 1105175 -  -9.6  -4.86862   GCGAAAAAATGAAAA          GCTCGGGA ATAAAACA TCCCGAGC           TCTGTAGTAATTAAT 100 53
LQRI_RS04760 1085279 .. 1085302 - -10.4  -4.77775   ATTGTATAAAAGAAA          CTACTTTGGA TATA CCCAAAGTAG           TTTTTTTATGTAAAG 100 123
LQRI_RS04730 1072682 .. 1072692 -  -5.4  -3.37902   AAGACTATAAAGAGA                 GGAT TGT ATCC                 AACAAGCTGGTTGCT  56 413
LQRI_RS04650 1055778 .. 1055797 -  -7.9   -5.0538   TTCCATTTTAAAAAA            GATGCCT GTTAGT AGGCATC             TTTTTTTCTCAAAAC  89 14
LQRI_RS04480 1011860 .. 1011891 - -11.7  -3.63511   AAGGATAAAAATATA      CGGGCGCATTT ACAGACGGAA AAATGCGCCCG       TTTTAAATTCATTCC  95 50
LQRI_RS04425  999123 ..  999134 -  -2.2  -2.84687   GCAATCATGAGTATA                CCTC GCTT GAGA                 TTTTTCTATGTTTTA  41 31
LQRI_RS04420  998115 ..  998165 - -11.5  -3.12395   TTTAGGACGTAAAAT CAGCCTTCATATCGTCTGTGTTCCT TAA AGGTA-ACA-ATGATATGAAGGCTG TATTTTAATTTTTAT  87 43
LQRI_RS04370  979151 ..  979170 -    -5  -5.98675   TATAAAAATAAAAAA            GCAAAGAA ATAA TACTTTGC             GGCTGATTTCTTTTT  93 50
LQRI_RS04360 NONE
        feoB  976019 ..  976036 -  -9.9  -2.93929   AAAATATAGAGCATA             GGAGAGT GTGT ACTCTCC              TTAAATATTTGTTTT  79 40
LQRI_RS04335 NONE
LQRI_RS04330  969662 ..  969676 -  -3.5  -3.31263   ATGCCATTGCCACAA               CCGCA GTGCT TGCAG               GAACTCTAATTGGAA  48 468
        sppA NONE
LQRI_RS04275  957086 ..  957104 -   -16  -3.83502   TAGGGCTAGAGCAAA             CCACCGGC TGA GCCGGTGG             TTATGATTTTTAAAC 100 35
LQRI_RS04260  953606 ..  953657 -  -3.2  -3.98312   TACATAAAACTTAAA TCTTATTTCGGCTTTTCATTTGAT GAAC ATAACATGAAAAGCTGAAACGAAA ATAAAATTTGCTTTT  55 268
LQRI_RS04255  951387 ..  951422 - -17.1  -5.32944   CTTAGAAGCAAAAAA    CGCAAAAAGCCTTCC GTGAAA GGAAGGCTTTTTACG     CAACACTTATTAAAG 100 21
LQRI_RS04250 NONE
LQRI_RS04245  949650 ..  949663 -  -3.9  -2.59564   CTTGTATGTGACAAG               GATTT GACC AAATC                GGACCTCGGGTGGGA  45 412
LQRI_RS04225  944346 ..  944364 -   -16  -3.83502   TAGGGCTAGAGCAAA             CCACCGGC TGA GCCGGTGG             TTATGATTATTTATC 100 282
LQRI_RS04150  931122 ..  931154 - -13.5   -3.2348   AAAATTAATATTTAA      GCCTCAAGTGGAGTT GAA ATCTCCACCTGAAGC      CCTCCAATGATTTCA 100 66
LQRI_RS04120  924131 ..  924161 -  -2.7  -5.27335   GTGGCGAAATAAAAA      CTGCCCCTGAAAAAT TTG ACTCTT--GGGGCAG      TTTATTTATGGAATA  69 61
LQRI_RS04080 NONE
LQRI_RS04075  914902 ..  914941 - -10.8  -2.98387   GCGTATAAAATATTA  CAGGGGGGTTCAGGAAACC AGA GTTTCCCTGAACCCCT-TG  ATTATACTATATACG  83 32
LQRI_RS04000  890755 ..  890773 -    -6  -3.38046   CCTTGATTGGAAATA             GGAGGATT TAT AATGCTCC             CCATTGTCAAGACAG  61 251
LQRI_RS03975  885759 ..  885791 - -15.8  -3.49182   ATATAGTATAATCAA     GGGGTTCAGGGAAAC TCTG GTTTCC-TGAACCCC      CCTGTAATATTTTAT 100 174
LQRI_RS03865  861353 ..  861379 -  -3.6  -5.02357   GAGAATGAAAGAAAA         CCAGGAGTTG GTGTGCA CGGCTCCTGG         TTTTTTGCATTTTCC  69 68
LQRI_RS03855  859946 ..  859980 -    -8  -4.04579   GGTATAAATATTAAA     GCCCGGAGTAAA GGGCTTTTGTA TTTACTCCGGAC     TTACGGTTTAAACTT  79 101
LQRI_RS03845  857899 ..  857924 -  -3.3  -2.93073   GGCCCTTAACAAGTA         CAATTTCCATA TGGC TTTGGAAGTTG          ATACGGTATGCATAG  45 321
LQRI_RS03820  851261 ..  851275 -  -2.8  -4.02733   GAAAATATACAACAA               GGTTCA TTT TGAAGC               ATTCAGATTTAATGT  55 174
LQRI_RS03785  841073 ..  841099 - -14.6  -4.64159   AGAAATAACAATAAA         GCATCAGAAGAT TTT ATCCTCTGATGC         CTGTTTATATTTTAC 100 66
LQRI_RS03780 NONE
LQRI_RS03775  839211 ..  839260 - -22.1  -2.98088   TTGCAAACCTAGACA GTAAAATATAAAAATAGCAGGAGA AAA TCTCCTGCTATTTTTATATTTT-C AAGTTAGTTACCTGG 100 33
LQRI_RS03770 NONE
LQRI_RS03765  837953 ..  837977 -  -8.6  -3.52177   TTTGAAAAAATTGAA          GGAAAAAGCC TGAAG GGCTTTTGCC          GCCCCAACCGTCAGA  76 36
LQRI_RS03755  836581 ..  836612 - -14.7  -5.40072   TGCTGTTTAAAAAAA      GAAATGCTGTTTG TGAAAG CAAACAGCATTTC       TTTTTTTGGTGGGCG 100 32
LQRI_RS03735  830808 ..  830847 - -12.3  -4.16787   AGAAGGAAATAATAA  GTAAAAGGCTCAGTGAC CAAAAT GTCTCTGAGCCTTTTAT   GCTTATATACCCATA 100 28
LQRI_RS03670  813627 ..  813655 - -10.4  -4.63479   TATTATAAATTAAAA        GAAGAGATTGGG TTTTG CTCAATCTCTTC        TCATTTATTTGGAGC  95 52
LQRI_RS03610  799118 ..  799139 -  -3.1  -2.74799   TATAATGCTCCAAAG           TTTTCGATA TAAT CATCAAAAA            GCCGTCATCAATTCC  42 145
LQRI_RS03605  798654 ..  798695 -  -7.9  -5.56264   TTGAAATATAAAAAA TGCCCGCCCTGG-TACGG TTTAATG CCGAAACCAGGGTGGGCT GAATTTACTGGAACA 100 30
LQRI_RS03590 NONE
LQRI_RS03585  793805 ..  793829 -  -8.8  -3.86916   GATTATTATATTAAA          GTAAAACTAA TATGT TTAGTTTTAC          TTGATAAAATCGAAT  79 142
LQRI_RS03580  793185 ..  793218 - -11.9  -2.66321   TTGATGAAAACATAC     GGATATAAAAAGAGG ATAC CCCCTTTTTGTATCC      CCCAATTTAGAGTCA  87 55
LQRI_RS03575  791119 ..  791165 - -13.4  -5.75478   AAGTACATAAAAAAA TTGTCAATTTATTCGAAGTC ATAAATA GAATCCGAATAAATTGACAA TAATTATGTTATTTG 100 69
LQRI_RS03495  770021 ..  770054 - -16.1  -4.21462   AGGTAGCATGCAAAA     GGGCTGCTGCACTAA GAAA TTGGTGCAACAGCCC      TTTTTGTCAGTCTTG 100 73
LQRI_RS03355 NONE
LQRI_RS03350  740255 ..  740266 -    -3  -4.10672   GCAACTGAAATCAAA                TATG TACC CATA                 ATTGTCTCCTAATAA  55 153
LQRI_RS03345  739192 ..  739202 -  -2.6  -4.84359   CGACCTCCACAAAAA                 TATA TAA TATA                 ATAATTAAAATTAAA  63 123
LQRI_RS03340  738082 ..  738123 - -14.1  -3.88464   TTAAAAATATTTAAA CATAAATGCAGAAAGGCTGA TAA TCAGGCTTT-TGCATTTATG TTGTCAACAATGTTA 100 136
LQRI_RS03335 NONE
LQRI_RS03330  733986 ..  734038 - -24.5  -4.89063   TTATCCAAAAACAAA TCCCCCCTGAATAAAAGCTGAGAAC ACT GTTCTCAGCTTTTATTCAGGGGATG TTTTATTGGTGGCTT 100 117
LQRI_RS03275  727944 ..  727958 -  -4.4  -4.18644   ATGACATAAATCAAA               TTTTTT TGT AAAAAA               TCAATTATTAATTGC  62 107
LQRI_RS03270  727534 ..  727553 - -12.2  -4.30014   CTGATTAATCTAAAA            GACCTGTC GTAC GACAGGTC             TTTTAATGATATAAT 100 45
LQRI_RS03255  724098 ..  724108 -  -3.2  -5.22137   AAGCACAAAACAAAA                 CCTG AAC CAAG                 CTTAGGATTACCGAT  71 62
LQRI_RS03250  722730 ..  722746 - -10.9   -4.4648   ATTCCCAGGAGAAAA              GAGGGTT GGA AACCCTC              GATGAGTTTGTAAGG  91 169
LQRI_RS03235  720724 ..  720755 -   -16  -5.36441   GCCGTAGATAAAAAA      GAGGCTCAGAAAGC GTTG GCTTTCTGAGCCTT       AAAACTTGTTGGGTT 100 61
LQRI_RS03190  697908 ..  697936 - -13.3  -3.60661   TACCTAACTATACAA        GGGTTGAGTAC GAAAACG GTACTCAACCC        TTTTTGGCATTGATT 100 90
LQRI_RS03105  678451 ..  678467 -  -3.7  -4.80167   CATTAAAAACCAAAA              TTCTCCG GCT CGAAAAA              ATGAGGTTATTCAAC  66 482
LQRI_RS03055  659783 ..  659810 -  -9.2  -3.58329   GAAATACCTTGGAAA        CCTGCTGCAATC TTTC GACTGCAGCAAA         CCTCCAGCATCAGAT  80 437
LQRI_RS02985  643108 ..  643132 -  -4.3   -5.0925   TTGCAAAATTAAAAA          CTCAGGG GTTGGCAAAGT CCCTGAG          TTTTTTGTCTTATTT  73 35
LQRI_RS02950  636060 ..  636077 - -11.3  -5.68039   AAACGTATAAAAAAA             GCCGCTA AAAT TAGCGGC              TTTTTTAAATGATGT 100 82
LQRI_RS02940 NONE
LQRI_RS16015  633338 ..  633356 -   -11   -5.0916   CGGGTAATAGAAAAA             CCACCTCC CGA AGAGGTGG             CTTTTTATTTTAAAG 100 35
LQRI_RS02935 NONE
LQRI_RS02930 NONE
LQRI_RS02925 NONE
LQRI_RS02920 NONE
LQRI_RS02915 NONE
LQRI_RS15605 NONE
        hypA NONE
        hypB NONE
        hypF NONE
LQRI_RS02895 NONE
        hypD NONE
        hypE  622080 ..  622110 -   -17  -5.26875   CTCCCAAGTAAAAAA       CCTCCGTCAGGA ACTTAAG TCCTGACGGAGG       TTTTTTACGTCTTAC 100 122
LQRI_RS02865 NONE
LQRI_RS02860  616897 ..  616919 -    -7  -5.05037   GAAGACAAAAAGAAA           GCCGGAAGAA AGT TTTTTCCGAC           TTTTTGAGAATTTAA  85 37
LQRI_RS02855  615815 ..  615831 -  -3.6   -2.9675   TATTTCATAAGGAGA              CGTGCC TATAG GGCATG              CAGGTTGTGGCGGCT  45 270
LQRI_RS16190  614834 ..  614854 - -11.9  -5.14645   ATAACGGAAGAAAAA            TTGCCGCCA GCA TGACGGCAA            TGCCGCATGCGGGAA 100 332
LQRI_RS02840  609986 ..  610005 - -10.7  -3.53281   TATAATAAAAAATGA            GGACCGG TTTTAT CCGGTCC             TTTTCTATTTTGCAT  85 61
LQRI_RS02820  606522 ..  606539 -    -7  -4.06384   TCGGAATATGACAAA             CCGGAT GAGGAA ATCCGG              CAAACCGATAAAGCG  71 104
LQRI_RS02770  594213 ..  594239 -  -9.5  -4.86731   GGTTGTTAAAGAAAA         CCTTGACCATA TGCGC TGTGGTCAAGG         TTTTTTTCATAAAAA 100 41
LQRI_RS02760 NONE
LQRI_RS02755 NONE
LQRI_RS02750 NONE
LQRI_RS02745 NONE
LQRI_RS02740  588348 ..  588360 -  -3.4  -3.26471   CCACTGTCAGATGAA                TACC TTTTT GGTA                TGCACTTGAGGGATT  48 127
LQRI_RS02715  583315 ..  583329 -  -5.6    -2.954   GATGGACCTATAAAG               CGGGGA CTG TTCCCG               ATTGGATTGCGCAGT  53 221
        sigI NONE
LQRI_RS02680  577936 ..  577946 -  -6.8  -3.11979   GGAACAAAGAAGAAT                 GGAC ATT GTCC                 GCGAAATACCGGTAA  60 76
LQRI_RS02665  573400 ..  573420 -  -6.2  -5.77856   AATAAAGCAAAAAAA           GGGGGAGTA ATTT TA-TCCCCC            TTTGTTGTACTGATT 100 58
LQRI_RS02645  570296 ..  570331 -  -4.9  -4.47686   TTAGAAAAAATGAAA    GGAGCCAAAT-AACTT TAGAC AGGTTGATTTAGCTCC    TTTTTTAATTAAGAC  67 62
LQRI_RS02630 NONE
LQRI_RS02625 NONE
LQRI_RS02620 NONE
LQRI_RS02615  563457 ..  563472 -  -6.1  -2.63636   AAATATCATAATTTA              CCTGC AAAATG GCAGG               CTACATAATGACCGT  57 0
LQRI_RS02610  561573 ..  561612 - -15.8  -4.47456   ACAGTTAATAAGAAA  TGGACGGTTCTTAGCCTG ACAT CAGACAAAGAACCGTCCG   CATTGTTTTAACTAT 100 37
LQRI_RS02595  559163 ..  559177 -  -4.2  -2.94099   GTCTGTTATGACAGA               CCGG CTGCCTT CCGG               TGAGGACGGGGTTTG  47 59
        istB  553161 ..  553181 -  -2.5  -3.65693   AGGATAGAGTTGAAA            TAAGCACTG TTG CAAAGCCTA            TAAAAATGACGGCAG  50 175
LQRI_RS02540  550549 ..  550569 -  -9.7  -4.31766   ACGATACAAGATAAA            GGGATGCCA TAT TGGAATCCC            TTATCCTGCACTAAT  90 92
LQRI_RS02535  548644 ..  548668 - -10.8   -3.5867   AAGAAAAATTTAGAA          TCTGCAGGAA AAAAA CTCCTGCAGA          TTTTTTATTTTATAC  89 35
        ispF  544584 ..  544595 -  -4.4  -4.42464   AACTGTTTAAAGAAA                TGGT GACG ACCA                 AGGGTTCAAAAGGTA  66 167
LQRI_RS02445  526801 ..  526817 -  -3.7  -4.01902   ACAGTTATCAAACAA              TCAAGCT CAA AGCTCAA              AGTTTGGTAATAATT  56 226
LQRI_RS02440  526410 ..  526423 -  -3.8  -3.74461   ATATATGAAAATGAA               CTCC TGCACT GGAG                GAAAAGGTCTTTTTT  53 77
LQRI_RS02435 NONE
LQRI_RS02430 NONE
LQRI_RS02425 NONE
LQRI_RS02420  519870 ..  519885 -  -3.2  -4.20888   TGAACTGAAAAAAGA              CGGC TATAATGT GCCG               GATAATATACTTACC  59 167
LQRI_RS02120  473625 ..  473636 -  -4.4  -3.02739   GGGAATGGAGAGACA                GAAG GCAA CTTC                 GATACGGAAAATACG  49 304
LQRI_RS02090  463491 ..  463501 -  -6.8  -2.70298   TTTTTTAAGCATAAC                 CTCC TCT GGAG                 TAAATTTACAATACC  59 156
LQRI_RS02085  461570 ..  461598 - -14.7  -5.22312   ATGGATATTAAAAAA        GGTTGACTGCC TTTGTTT GGCAGTCAACC        TTTAATTTTATTATA 100 55
        lysS  446088 ..  446121 - -14.1  -5.63374   CCAATATCAAAAAAA     TCCTTGAAACACTTT GCGT ACAGTGTTTCAAGGA      TTCTTAAATCTTTTT 100 58
LQRI_RS01995  427474 ..  427499 - -11.2  -5.02074   GGATTTTTCAAAAAA         GCACCGGAAGC TTATT GCT-CCGGTGC         TTTTTAAAAATGTAA 100 73
LQRI_RS01835  398192 ..  398219 -  -6.4  -6.08342   GAACAAATAAAAAAA        CCAAGCGTTAAAT TCC ATTTC-CGCTTGG        CTTTCATGCTAGAGA 100 34
LQRI_RS01830 NONE
         ric  396031 ..  396047 -  -2.3  -3.86311   AGAGGCAAAGTGAAA              GTATG GGATAAG CATAC              ATTAGAAAAAGAGCA  50 97
LQRI_RS01715 NONE
LQRI_RS01710  366482 ..  366510 -   -14  -5.48825   GAGGATGTAAAAAAA        TTCGGGCGGATA TGTTT TATCCACCCGAA        TACAAAGTGTAGTAT 100 13
        csaB NONE
LQRI_RS01505  316464 ..  316483 -  -8.6  -4.38141   GTTGAGATAAAATAA            GGAGGC-GT TTT ACAGCCTCC            TTTTGTTTTTGTCAT  88 198
LQRI_RS01445  304408 ..  304428 -    -7  -4.72617   TTAGAAAAGAACAAA            CTGATTAA TTATT TTAATCAG            AAACATGACGTAAAC  81 224
LQRI_RS01380  291256 ..  291269 -  -8.1  -3.65046   CTGTGATTTCAATAA               CCAGG CTTA CCTGG                CAGCCTGGCGCTTTA  75 18
LQRI_RS01375 NONE
LQRI_RS01370  289384 ..  289416 -   -10  -5.00196   TTTGAAAGAAGAAAA     GAGAAAAGAGGCTCG TGAT CGAGCCTCTTT-CTA      TTCTATAATGAAACA 100 65
LQRI_RS01300  275847 ..  275882 -   -15  -3.71649   TGTTCAAAGTTTAAA    TAACAATGGA-GGGGCA ATG TGCCCCGTCCATTATTA    TGCTTTCTTTATCAA 100 23
LQRI_RS01295  274925 ..  274943 -  -5.9  -4.08692   CAATGCTGGCCAAAA             CCCTTGG TACTG CCCAGGG             AGTTTTGGAAAAGCT  65 492
LQRI_RS01210  261940 ..  261950 -    -4  -3.01924   GATTGTTTCTTAAGA                 CTTT AGC AAAG                 GAACTGACTTGTCTT  48 127
LQRI_RS01205 NONE
LQRI_RS01200 NONE
LQRI_RS01195 NONE
LQRI_RS01190 NONE
LQRI_RS01185 NONE
LQRI_RS01180 NONE
LQRI_RS01175 NONE
LQRI_RS01170 NONE
        neuB NONE
        neuC NONE
LQRI_RS01155 NONE
LQRI_RS01150 NONE
LQRI_RS01145 NONE
        murJ  247257 ..  247268 -  -5.8  -3.73402   ATAGTTGTCAGCAAA                GCTC TGAG GAGC                 TGTAACTAAAACTTT  62 298
        murC  234016 ..  234053 -  -5.5  -5.47159   GTTTAATATAAAAAA   GTCCGAGAAAAACACGA GGCA TCGTGAAATTATCGGAC    TTTTTATTTGGCTTT  84 64
LQRI_RS00905  190452 ..  190500 - -14.3  -2.86124   TGCATTTAAAGACTA TTGAACGCATATTCAGAAA-CA CCGGTT TGCTTTCTGGATATGCGTTCAA AATATATCATGATGA 100 32
LQRI_RS00850 NONE
LQRI_RS00845  179959 ..  179983 -  -4.9  -4.77173   TTTCGACAAAAGAAA          TTCCCCGACCA CAT TAGCCGAGGGA          CATACTTTCAGCCAC  74 165
LQRI_RS00820 NONE
LQRI_RS00805 NONE
LQRI_RS00800  170439 ..  170450 -    -3  -4.89009   ATACTGAATTAAAAA                GTAT AAAT ATAC                 TTTATGGAAATAAAC  65 53
LQRI_RS00795 NONE
LQRI_RS00790 NONE
LQRI_RS00785  167565 ..  167576 -    -3  -3.86524   ATACGTCCCCATAAA                TGTT CAAT AACA                 CATTTACCGTCGCTG  52 374
LQRI_RS00780  166269 ..  166283 -  -2.2  -3.59024   TGATAAATATTACAA               TTCTTT AGT AAAAAA               CGCAAGTGCCAACAC  47 57
LQRI_RS00775  164901 ..  164940 - -10.8  -2.98387   GCGTATAAAATATTA  CAGGGGGGTTCAGGAAACC AGA GTTTCCCTGAACCCCT-TG  ATTATACTATATACG  83 32
LQRI_RS00770  162651 ..  162662 -  -4.4  -3.06696   TCTCCGGCTAATACA                GCAT TTCA ATGC                 AATGATAAATCCATT  50 288
        rfbF  161824 ..  161834 -  -2.6  -3.55071   TTATATCTGCGGAAA                 TTAT TTG ATAA                 ATATGTGGCTTACCA  46 35
        rfbG  160251 ..  160261 -  -3.2  -3.88787   TTACATTTTCAGAAA                 CCTC CCA GAGA                 GCATACAAAAGTAGT  54 393
LQRI_RS00745 NONE
LQRI_RS00740 NONE
LQRI_RS00735  154566 ..  154576 -  -2.6  -3.64099   AAAATATTAAACTAA                 TTTT CAA AAAA                 TTGTCAGTACATAGA  48 91
LQRI_RS00730 NONE
LQRI_RS00725 NONE
LQRI_RS00720 NONE
LQRI_RS00715 NONE
LQRI_RS00710 NONE
LQRI_RS00705  147732 ..  147759 -   -10  -4.13767   GGGCGCACGCTAAAA        TAGCCAAAGC ACTTTAAA GCTTTGGCTA         TTTTTATGAAATTGG  90 213
LQRI_RS16170 NONE
LQRI_RS16165 NONE
LQRI_RS00675  142636 ..  142647 -  -2.2  -3.53012   TTGTGCCTGCTTAAA                CTGG GAAT CCAA                 CATATTCGAACAGAT  46 9
LQRI_RS00670  141950 ..  141979 -  -7.9  -3.86975   ATAATTCAAAGATAA       GGCCAAGGTTCAT TTTT ATGAAACCTGACC        TTTGAATACGTTATA  74 79
LQRI_RS00665 NONE
LQRI_RS00660  139661 ..  139698 - -15.9  -4.77157   GCAAGGTATGAAAAA   TTATACCGTTC-CTGGCA TTA TGCCAACGAACGGTATAA   TTTGAAAACTAAGAT 100 57
LQRI_RS00470  100021 ..  100033 -  -4.1   -3.3247   AACCCCCAGATAACA                GGTTA AAA CAACC                GTTAAGCTCAATCAG  49 37
LQRI_RS16420   98292 ..   98303 -  -5.8  -3.30701   TGTGATTAAATTGAA                GGAC TATG GTCC                 AGAGCCTTTTGTAGT  56 433
LQRI_RS00435   93408 ..   93434 -  -7.3  -5.67063   TTTATTACAAAAAAA         TGCGCCTTTCC AGGGA AGAAAGGTGCA         ATAAATGGGTTTAGT 100 71
LQRI_RS00430 NONE
        pepF   90955 ..   90990 - -12.8  -3.66117   GTAACCAGATAAATA    TATCGCGAGTT-CAAAG CTG CTTCGGAACCCGCGATA    CGTTTTTATATTATA 100 87
LQRI_RS00420   87280 ..   87304 -  -2.3  -5.40474   ACTTTTTTAAAAAAA          CAAATGATAAT TAA ATTATAATTTA          TATTACCAGGAAAAA  71 295
LQRI_RS00370   76903 ..   76921 - -11.7  -4.20163   AATTAAAACAAAATA             CCCGGGT GAAAT ACCCGGG             TTAAATAATTTATAT 100 52
LQRI_RS00350   74332 ..   74349 - -11.3  -4.03234   TTCTTTTGACATAAA             GCTCAGC GGAT GCTGAGC              TTAATATATTTGTAA 100 58
        ytvI   67298 ..   67328 - -10.6  -2.78384   CTTGCCGGCATTATA       GCCCAAAGTCCTTT TGC AAAAGACTTTGAAC       GCAAGGGAGAAGGAT  77 354
LQRI_RS00290 NONE
LQRI_RS00285   59398 ..   59431 - -10.3  -5.09426   TTTAATTTTAAAAAA     TGAAAGCTCCGGGAT ACAC ACCCCGGAGCTTTTG      CTAAGTTTTTTGAAT 100 40
LQRI_RS00280   58106 ..   58137 -  -4.4  -5.05113   TTTATATAAATAAAA      CAGGAGTTGTGGAA CATA TTTTTCAACTCCTG       CTTTATTTTCGTTTT  73 83
LQRI_RS00260 NONE
LQRI_RS00255   53315 ..   53330 -  -5.4  -3.83705   AAAAGCACCAGGAAA              GGCATGC CAT GC-TGCC              TCATTACGTGTTGCC  61 47
LQRI_RS16155   49046 ..   49056 -  -2.4  -2.58539   AATATCACCAATTCA                 GAGG CTT CCAC                 CCATTAAAAGCACAG  40 12
LQRI_RS16150   48207 ..   48229 - -10.6  -2.84051   CTACTGTGAGTAAAT           TCACAGGTAC GCC GTACCTGTGG           GGAGGAGTCAGCAGC  77 323
LQRI_RS00185   37136 ..   37149 -  -8.1  -3.44801   TTCGATAAAAAAGGA               CGTGG AGTT CCACG                AGTTAATATATCGGG  68 299
LQRI_RS00155   30388 ..   30398 -  -2.6  -4.60924   TAAACGGGGTAAAAA                 TAAA AAA TTTA                 GAGCCCAATGGGAAG  60 88
LQRI_RS00135 NONE
LQRI_RS00130   25206 ..   25216 -    -4  -3.50492   TAGGATATAGGATAA                 TATG GTT CATA                 GAATGATACAGTTTC  51 52
LQRI_RS15560   24731 ..   24741 -  -5.4  -3.58305   AAGGAATTCTTGAAA                 CTTC AGG GAAG                 ATTTAAACATCTTTT  58 262
LQRI_RS00095   19271 ..   19290 -  -3.6  -3.93256   CATATTTTGAAAGAA            TATTTTGC CAAT GCATAATA             AAATCATATTAAATT  54 40
LQRI_RS00090   17193 ..   17215 -  -8.4  -5.29846   AACTGTAAATAAAAA           GCGAAGGG CTTATTT CCCCTCGC           TTTTATTATTGGAAT  93 61
LQRI_RS00080   15734 ..   15755 -  -3.7  -5.56573   ATAAAGAAATAAAAA           GCATCCC AAAATTCA AGGATGC            TTTTATAAATCCATA  79 97
LQRI_RS00075   14524 ..   14557 -  -5.5  -5.80364   ATTTTAATAAAAAAA     GATGTATAAGC AGTGTAGAAAAA GCTTATACATC      TTTTTTTACATGCGA  91 106
LQRI_RS00070   12853 ..   12884 - -16.2  -3.53012   TCCTTCTCCGCCAAA      TAAAAGCATTCCAT TATT ATGGAATGCTTTTA       TTTGTTGTTTACCTT 100 42
