locus-tag	class	description
EMQ_RS00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
EMQ_RS00015	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
EMQ_RS00040	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
EMQ_RS00045	COG1702	phosphate starvation-inducible protein PhoH
EMQ_RS00050	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
EMQ_RS00075	COG0277	FAD linked oxidase domain protein
EMQ_RS00085	COG2890	protein-(glutamine-N5) methyltransferase activity
EMQ_RS00090	COG1686	Belongs to the peptidase S11 family
EMQ_RS00105	COG0739	heme binding
EMQ_RS00105	COG0741	lytic transglycosylase activity
EMQ_RS00105	COG1196	nuclear chromosome segregation
EMQ_RS00110	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
EMQ_RS00115	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
EMQ_RS00120	COG1185	polyribonucleotide nucleotidyltransferase activity
EMQ_RS00130	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
EMQ_RS00150	COG0714	Associated with various cellular activities
EMQ_RS00160	COG0617	tRNA 3'-terminal CCA addition
EMQ_RS00165	COG1132	(ABC) transporter
EMQ_RS00170	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
EMQ_RS00175	COG2264	protein methyltransferase activity
EMQ_RS00180	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
EMQ_RS00185	COG0154	amidase activity
EMQ_RS00190	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
EMQ_RS00195	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
EMQ_RS00205	COG2199	diguanylate cyclase activity
EMQ_RS00210	COG2171	N-acyltransferase activity
EMQ_RS00215	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
EMQ_RS00225	COG0438	transferase activity, transferring glycosyl groups
EMQ_RS00235	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
EMQ_RS00270	COG1120	ATPase activity
EMQ_RS00275	COG1012	belongs to the aldehyde dehydrogenase family
EMQ_RS00305	COG1028	Short-chain dehydrogenase reductase Sdr
EMQ_RS00320	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
EMQ_RS00330	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
EMQ_RS00335	COG4208	sulfate ABC transporter
EMQ_RS00340	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
EMQ_RS00345	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
EMQ_RS00375	COG1045	serine acetyltransferase
EMQ_RS00385	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
EMQ_RS00390	COG4608	Belongs to the ABC transporter superfamily
EMQ_RS00405	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
EMQ_RS00410	COG0747	negative chemotaxis
EMQ_RS00420	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
EMQ_RS00420	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
EMQ_RS00455	COG1028	Short-chain dehydrogenase reductase Sdr
EMQ_RS00490	COG1160	GTP binding
EMQ_RS00515	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
EMQ_RS00520	COG1393	Belongs to the ArsC family
EMQ_RS00525	COG1278	Cold shock
EMQ_RS00560	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
EMQ_RS00570	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
EMQ_RS00570	COG3608	succinylglutamate desuccinylase aspartoacylase
EMQ_RS00585	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
EMQ_RS00590	COG0402	S-adenosylhomocysteine deaminase activity
EMQ_RS00600	COG0850	regulation of cytokinetic process
EMQ_RS00605	COG2894	cell division
EMQ_RS00610	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
EMQ_RS00615	COG3511	phospholipase C
EMQ_RS00625	COG1764	response to oxidative stress
EMQ_RS00630	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
EMQ_RS00645	COG3590	peptidase
EMQ_RS00670	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
EMQ_RS00680	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
EMQ_RS00685	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
EMQ_RS00700	COG0535	radical SAM domain protein
EMQ_RS00710	COG5424	Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ
EMQ_RS00715	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
EMQ_RS00755	COG2995	paraquat-inducible protein a
EMQ_RS00780	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
EMQ_RS00785	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
EMQ_RS00795	COG2189	Belongs to the N(4) N(6)-methyltransferase family
EMQ_RS00800	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
EMQ_RS00810	COG0477	Major facilitator Superfamily
EMQ_RS00830	COG0751	glycine-tRNA ligase activity
EMQ_RS00835	COG0752	glycyl-tRNA synthetase alpha subunit
EMQ_RS00845	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
EMQ_RS00860	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
EMQ_RS00865	COG0525	valine-tRNA ligase activity
EMQ_RS00880	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
EMQ_RS00890	COG0837	glucose binding
EMQ_RS00915	COG1566	PFAM secretion protein HlyD family protein
EMQ_RS00935	COG2132	Multicopper oxidase
EMQ_RS00960	COG4964	Belongs to the GSP D family
EMQ_RS01000	COG1858	cytochrome C peroxidase
EMQ_RS01020	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
EMQ_RS01035	COG0606	chelatase, subunit chli
EMQ_RS01040	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
EMQ_RS01045	COG0483	inositol monophosphate 1-phosphatase activity
EMQ_RS01055	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
EMQ_RS01060	COG0077	Prephenate dehydratase
EMQ_RS01060	COG1605	Chorismate mutase
EMQ_RS01065	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
EMQ_RS01070	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
EMQ_RS01075	COG1278	Cold shock
EMQ_RS01095	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
EMQ_RS01120	COG2144	transferase activity, transferring acyl groups
EMQ_RS01135	COG2072	flavoprotein involved in K transport
EMQ_RS01145	COG1028	Short-chain dehydrogenase reductase Sdr
EMQ_RS01150	COG0583	DNA-binding transcription factor activity
EMQ_RS01155	COG2249	NAD(P)H dehydrogenase (quinone) activity
EMQ_RS01230	COG0583	DNA-binding transcription factor activity
EMQ_RS01305	COG1937	Protein conserved in bacteria
EMQ_RS01315	COG2132	Multicopper oxidase
EMQ_RS01345	COG1335	isochorismatase
EMQ_RS01350	COG2814	Major facilitator Superfamily
EMQ_RS01400	COG3685	Protein conserved in bacteria
EMQ_RS01415	COG1902	pentaerythritol trinitrate reductase activity
EMQ_RS01420	COG1733	regulation of RNA biosynthetic process
EMQ_RS01430	COG1733	regulation of RNA biosynthetic process
EMQ_RS01460	COG0582	viral genome integration into host DNA
EMQ_RS01470	COG0261	This protein binds to 23S rRNA in the presence of protein L20
EMQ_RS01475	COG0211	Belongs to the bacterial ribosomal protein bL27 family
EMQ_RS01480	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
EMQ_RS01485	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
EMQ_RS01510	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
EMQ_RS01540	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
EMQ_RS01545	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
EMQ_RS01550	COG1196	nuclear chromosome segregation
EMQ_RS01550	COG0741	lytic transglycosylase activity
EMQ_RS01550	COG0739	heme binding
EMQ_RS01555	COG0861	Integral membrane protein TerC family
EMQ_RS01575	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
EMQ_RS01575	COG1648	precorrin-2 dehydrogenase activity
EMQ_RS01580	COG5328	Belongs to the UPF0262 family
EMQ_RS01605	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
EMQ_RS01610	COG0134	indole-3-glycerol-phosphate synthase activity
EMQ_RS01620	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
EMQ_RS01625	COG0508	dehydrogenase complex catalyzes the overall conversion of
EMQ_RS01630	COG0022	dehydrogenase e1 component
EMQ_RS01630	COG0508	dehydrogenase complex catalyzes the overall conversion of
EMQ_RS01635	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
EMQ_RS01640	COG3800	Transcriptional regulator
EMQ_RS01640	COG1396	sequence-specific DNA binding
EMQ_RS01645	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
EMQ_RS01650	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
EMQ_RS01660	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
EMQ_RS01670	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
EMQ_RS01730	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
EMQ_RS01735	COG1459	type II secretion system
EMQ_RS01745	COG2165	general secretion pathway protein
EMQ_RS01780	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
EMQ_RS01790	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
EMQ_RS01795	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
EMQ_RS01800	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
EMQ_RS01825	COG1289	transmembrane transporter activity
EMQ_RS01830	COG1566	PFAM secretion protein HlyD family protein
EMQ_RS01840	COG0539	negative regulation of cytoplasmic translation
EMQ_RS01850	COG0463	Glycosyl transferase, family 2
EMQ_RS01860	COG0019	diaminopimelate decarboxylase activity
EMQ_RS01880	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
EMQ_RS01895	COG1584	GPR1 FUN34 yaaH family protein
EMQ_RS01905	COG1132	(ABC) transporter
EMQ_RS01920	COG0432	Pfam Uncharacterised protein family UPF0047
EMQ_RS01965	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
EMQ_RS01980	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
EMQ_RS02000	COG0356	it plays a direct role in the translocation of protons across the membrane
EMQ_RS02005	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
EMQ_RS02010	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
EMQ_RS02015	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
EMQ_RS02020	COG0463	Glycosyl transferase, family 2
EMQ_RS02025	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
EMQ_RS02045	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
EMQ_RS02045	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
EMQ_RS02050	COG1494	fructose-1,6-bisphosphatase
EMQ_RS02060	COG0436	Aminotransferase
EMQ_RS02070	COG2271	Major facilitator Superfamily
EMQ_RS02095	COG0390	transport system, permease component
EMQ_RS02100	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
EMQ_RS02120	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
EMQ_RS02125	COG0237	dephospho-CoA kinase activity
EMQ_RS02155	COG0321	lipoyl(octanoyl) transferase activity
EMQ_RS02180	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
EMQ_RS02210	COG1573	uracil-dna glycosylase
EMQ_RS02230	COG0175	sulfate reduction
EMQ_RS02235	COG0175	sulfate reduction
EMQ_RS02245	COG2226	methyltransferase
EMQ_RS02255	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
EMQ_RS02290	COG0745	RESPONSE REGULATOR receiver
EMQ_RS02315	COG0859	PFAM glycosyl transferase family 9
EMQ_RS02315	COG0457	Tetratricopeptide repeat
EMQ_RS02320	COG0659	secondary active sulfate transmembrane transporter activity
EMQ_RS02340	COG1121	(ABC) transporter
EMQ_RS02355	COG0534	Mate efflux family protein
EMQ_RS02375	COG1706	bacterial-type flagellum-dependent cell motility
EMQ_RS02395	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
EMQ_RS02430	COG2999	glutathione oxidoreductase activity
EMQ_RS02435	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
EMQ_RS02440	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
EMQ_RS02445	COG1127	ABC transporter
EMQ_RS02450	COG3008	intermembrane lipid transfer
EMQ_RS02450	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
EMQ_RS02465	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
EMQ_RS02475	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
EMQ_RS02480	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
EMQ_RS02485	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
EMQ_RS02495	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
EMQ_RS02505	COG0793	Belongs to the peptidase S41A family
EMQ_RS02515	COG1051	belongs to the nudix hydrolase family
EMQ_RS02550	COG3206	protein involved in exopolysaccharide biosynthesis
EMQ_RS02550	COG0489	protein tyrosine kinase activity
EMQ_RS02575	COG0045	succinate-CoA ligase (ADP-forming) activity
EMQ_RS02580	COG0604	alcohol dehydrogenase
EMQ_RS02580	COG1028	Short-chain dehydrogenase reductase Sdr
EMQ_RS02580	COG3321	synthase
EMQ_RS02585	COG0596	Alpha beta hydrolase
EMQ_RS02595	COG2719	SpoVR family
EMQ_RS02600	COG2718	Belongs to the UPF0229 family
EMQ_RS02605	COG2766	serine protein kinase
EMQ_RS02615	COG0084	hydrolase, TatD family'
EMQ_RS02620	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
EMQ_RS02630	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
EMQ_RS02635	COG1686	Belongs to the peptidase S11 family
EMQ_RS02640	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
EMQ_RS02645	COG2951	lytic endotransglycosylase activity
EMQ_RS02655	COG0586	Pfam SNARE associated Golgi protein
EMQ_RS02670	COG1968	undecaprenyl-diphosphatase activity
EMQ_RS02675	COG0531	amino acid
EMQ_RS02695	COG0165	Argininosuccinate lyase
EMQ_RS02700	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
EMQ_RS02705	COG3585	molybdate ion transport
EMQ_RS02710	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
EMQ_RS02715	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
EMQ_RS02730	COG1113	amino acid transport
EMQ_RS02735	COG1396	sequence-specific DNA binding
EMQ_RS02735	COG3800	Transcriptional regulator
EMQ_RS02740	COG2224	Isocitrate lyase
EMQ_RS02755	COG1346	cytolysis
EMQ_RS02765	COG1970	mechanosensitive ion channel activity
EMQ_RS02770	COG0254	rRNA binding
EMQ_RS02795	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
EMQ_RS02810	COG0494	nUDIX hydrolase
EMQ_RS02815	COG2814	Major facilitator Superfamily
EMQ_RS02820	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
EMQ_RS02825	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
EMQ_RS02905	COG0271	Belongs to the BolA IbaG family
EMQ_RS02910	COG0484	heat shock protein binding
EMQ_RS02925	COG0076	glutamate decarboxylase activity
EMQ_RS02930	COG0596	Alpha beta hydrolase
EMQ_RS02940	COG2308	Evidence 4 Homologs of previously reported genes of
EMQ_RS02950	COG2003	Belongs to the UPF0758 family
EMQ_RS02955	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
EMQ_RS02965	COG0546	phosphoglycolate phosphatase activity
EMQ_RS02995	COG0697	spore germination
EMQ_RS03000	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
EMQ_RS03005	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
EMQ_RS03010	COG0546	phosphoglycolate phosphatase activity
EMQ_RS03015	COG2814	Major facilitator Superfamily
EMQ_RS03030	COG1692	metallophosphoesterase
EMQ_RS03035	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
EMQ_RS03060	COG0352	thiamine-phosphate diphosphorylase activity
EMQ_RS03065	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
EMQ_RS03090	COG2308	Evidence 4 Homologs of previously reported genes of
EMQ_RS03090	COG2307	Protein conserved in bacteria
EMQ_RS03115	COG4993	Dehydrogenase
EMQ_RS03120	COG4993	Dehydrogenase
EMQ_RS03135	COG0728	peptidoglycan biosynthetic process
EMQ_RS03160	COG1862	Preprotein translocase
EMQ_RS03175	COG0494	nUDIX hydrolase
EMQ_RS03180	COG1058	Belongs to the CinA family
EMQ_RS03180	COG1546	Belongs to the CinA family
EMQ_RS03185	COG0825	malonyl-CoA metabolic process
EMQ_RS03190	COG4974	Belongs to the 'phage' integrase family
EMQ_RS03200	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
EMQ_RS03205	COG2885	chlorophyll binding
EMQ_RS03205	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
EMQ_RS03215	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
EMQ_RS03245	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
EMQ_RS03250	COG1196	nuclear chromosome segregation
EMQ_RS03265	COG0459	protein refolding
EMQ_RS03270	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
EMQ_RS03275	COG0583	DNA-binding transcription factor activity
EMQ_RS03300	COG2814	Major facilitator Superfamily
EMQ_RS03305	COG1045	serine acetyltransferase
EMQ_RS03320	COG0037	tRNA processing
EMQ_RS03330	COG2885	chlorophyll binding
EMQ_RS03335	COG0823	Involved in the tonB-independent uptake of proteins
EMQ_RS03345	COG0848	biopolymer transport protein
EMQ_RS03355	COG0824	Thioesterase
EMQ_RS03360	COG2255	four-way junction helicase activity
EMQ_RS03365	COG0632	four-way junction helicase activity
EMQ_RS03370	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
EMQ_RS03385	COG1607	acyl-coa hydrolase
EMQ_RS03395	COG1929	Belongs to the glycerate kinase type-1 family
EMQ_RS03405	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
EMQ_RS03410	COG1605	Chorismate mutase
EMQ_RS03410	COG0287	Prephenate dehydrogenase
EMQ_RS03415	COG2062	phosphohistidine phosphatase, SixA
EMQ_RS03455	COG1450	Type ii and iii secretion system protein
EMQ_RS03470	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
EMQ_RS03475	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
EMQ_RS03480	COG0142	geranyltranstransferase activity
EMQ_RS03490	COG0783	Belongs to the Dps family
EMQ_RS03500	COG0257	Belongs to the bacterial ribosomal protein bL36 family
EMQ_RS03505	COG0583	DNA-binding transcription factor activity
EMQ_RS03510	COG0450	alkyl hydroperoxide reductase
EMQ_RS03515	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
EMQ_RS03530	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
EMQ_RS03535	COG1923	regulation of RNA biosynthetic process
EMQ_RS03540	COG2204	response regulator
EMQ_RS03580	COG0717	Belongs to the dCTP deaminase family
EMQ_RS03585	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
EMQ_RS03630	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
EMQ_RS03640	COG1215	transferase activity, transferring glycosyl groups
EMQ_RS03655	COG2967	ApaG domain
EMQ_RS03660	COG0302	gtp cyclohydrolase
EMQ_RS03670	COG0187	DNA topoisomerase II activity
EMQ_RS03685	COG1959	2 iron, 2 sulfur cluster binding
EMQ_RS03690	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
EMQ_RS03695	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
EMQ_RS03695	COG2885	chlorophyll binding
EMQ_RS03705	COG0793	Belongs to the peptidase S41A family
EMQ_RS03710	COG0557	exoribonuclease II activity
EMQ_RS03715	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
EMQ_RS03720	COG0758	DNA mediated transformation
EMQ_RS03725	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
EMQ_RS03730	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
EMQ_RS03735	COG0540	Belongs to the ATCase OTCase family
EMQ_RS03740	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
EMQ_RS03745	COG1289	transmembrane transporter activity
EMQ_RS03785	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
EMQ_RS03790	COG1674	ftsk spoiiie
EMQ_RS03795	COG0564	pseudouridine synthase activity
EMQ_RS03815	COG2022	thiamine diphosphate biosynthetic process
EMQ_RS03860	COG3800	Transcriptional regulator
EMQ_RS03860	COG1396	sequence-specific DNA binding
EMQ_RS03865	COG2079	MmgE PrpD family protein
EMQ_RS03870	COG0372	Belongs to the citrate synthase family
EMQ_RS03875	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
EMQ_RS03880	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
EMQ_RS03900	COG1519	Transferase
EMQ_RS03905	COG1663	tetraacyldisaccharide 4'-kinase activity
EMQ_RS03920	COG4774	siderophore transport
EMQ_RS03930	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
EMQ_RS03935	COG0840	transmembrane signaling receptor activity
EMQ_RS03940	COG0114	fumarate hydratase activity
EMQ_RS03950	COG4993	Dehydrogenase
EMQ_RS03965	COG2814	Major facilitator Superfamily
EMQ_RS03975	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
EMQ_RS03980	COG0564	pseudouridine synthase activity
EMQ_RS04010	COG0513	Belongs to the DEAD box helicase family
EMQ_RS04030	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
EMQ_RS04035	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
EMQ_RS04040	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
EMQ_RS04055	COG0024	Methionine aminopeptidase
EMQ_RS04065	COG0137	argininosuccinate synthase activity
EMQ_RS04070	COG0545	Peptidyl-prolyl cis-trans isomerase
EMQ_RS04085	COG0180	Tryptophanyl-tRNA synthetase
EMQ_RS04095	COG0668	transmembrane transport
EMQ_RS04100	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
EMQ_RS04105	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
EMQ_RS04135	COG2201	protein-glutamate methylesterase activity
EMQ_RS04140	COG0248	Ppx GppA phosphatase
EMQ_RS04150	COG0829	nickel cation binding
EMQ_RS04155	COG0831	urea catabolic process
EMQ_RS04160	COG0832	Belongs to the urease beta subunit family
EMQ_RS04165	COG0804	urea catabolic process
EMQ_RS04170	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
EMQ_RS04175	COG0830	nickel cation binding
EMQ_RS04180	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
EMQ_RS04195	COG0583	DNA-binding transcription factor activity
EMQ_RS04215	COG0411	ABC transporter
EMQ_RS04240	COG0745	RESPONSE REGULATOR receiver
EMQ_RS04250	COG4974	Belongs to the 'phage' integrase family
EMQ_RS04265	COG1902	pentaerythritol trinitrate reductase activity
EMQ_RS04280	COG0604	alcohol dehydrogenase
EMQ_RS04285	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
EMQ_RS04290	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
EMQ_RS04295	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
EMQ_RS04300	COG0259	pyridoxamine-phosphate oxidase activity
EMQ_RS04310	COG2814	Major facilitator Superfamily
EMQ_RS04315	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
EMQ_RS04330	COG0583	DNA-binding transcription factor activity
EMQ_RS04335	COG3384	dioxygenase
EMQ_RS04340	COG2353	YceI-like domain
EMQ_RS04350	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
EMQ_RS04360	COG1028	Short-chain dehydrogenase reductase Sdr
EMQ_RS04375	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
EMQ_RS04380	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
EMQ_RS04385	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
EMQ_RS04390	COG3300	MHYT domain
EMQ_RS04390	COG5001	Diguanylate cyclase
EMQ_RS04400	COG0556	nucleotide-excision repair
EMQ_RS04405	COG1530	ribonuclease E activity
EMQ_RS04445	COG3706	GGDEF domain
EMQ_RS04450	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
EMQ_RS04455	COG0124	histidyl-tRNA synthetase
EMQ_RS04460	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
EMQ_RS04470	COG2070	2-Nitropropane dioxygenase
EMQ_RS04475	COG0527	aspartate kinase activity
EMQ_RS04480	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
EMQ_RS04485	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
EMQ_RS04490	COG0359	binds to the 23S rRNA
EMQ_RS04495	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
EMQ_RS04500	COG0360	Binds together with S18 to 16S ribosomal RNA
EMQ_RS04510	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
EMQ_RS04515	COG0358	DNA primase activity
EMQ_RS04520	COG1610	YqeY-like protein
EMQ_RS04530	COG0010	Belongs to the arginase family
EMQ_RS04545	COG1028	Short-chain dehydrogenase reductase Sdr
EMQ_RS04560	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
EMQ_RS04570	COG0505	Belongs to the CarA family
EMQ_RS04580	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
EMQ_RS04585	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
EMQ_RS04590	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
EMQ_RS04600	COG0799	negative regulation of ribosome biogenesis
EMQ_RS04605	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
EMQ_RS04610	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
EMQ_RS04615	COG0012	GTP binding
EMQ_RS04620	COG0193	aminoacyl-tRNA hydrolase activity
EMQ_RS04625	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
EMQ_RS04655	COG0768	penicillin binding
EMQ_RS04660	COG0772	Belongs to the SEDS family
EMQ_RS04670	COG0484	heat shock protein binding
EMQ_RS04680	COG0025	NhaP-type Na H and K H
EMQ_RS04690	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
EMQ_RS04695	COG0277	FAD linked oxidase domain protein
EMQ_RS04700	COG0778	Nitroreductase
EMQ_RS04705	COG2244	polysaccharide biosynthetic process
EMQ_RS04710	COG0481	GTPase activity
EMQ_RS04720	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
EMQ_RS04730	COG5001	Diguanylate cyclase
EMQ_RS04735	COG0431	NADPH-dependent FMN reductase
EMQ_RS04740	COG0513	Belongs to the DEAD box helicase family
EMQ_RS04750	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
EMQ_RS04755	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
EMQ_RS04760	COG0552	protein localization to endoplasmic reticulum
EMQ_RS04820	COG0667	Aldo Keto reductase
EMQ_RS04825	COG1054	Belongs to the UPF0176 family
EMQ_RS04855	COG0635	Involved in the biosynthesis of porphyrin-containing compound
EMQ_RS04860	COG3158	transport of potassium into the cell
EMQ_RS04865	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
EMQ_RS04880	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
EMQ_RS04885	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
EMQ_RS04890	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
EMQ_RS04895	COG0424	maF-like protein
EMQ_RS04905	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
EMQ_RS04915	COG0315	cyclic pyranopterin monophosphate synthase activity
EMQ_RS04930	COG0723	plastoquinol--plastocyanin reductase activity
EMQ_RS04940	COG0477	Major facilitator Superfamily
EMQ_RS04955	COG2010	Cytochrome c
EMQ_RS04955	COG1529	Aldehyde oxidase and xanthine dehydrogenase
EMQ_RS04960	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
EMQ_RS04985	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
EMQ_RS05000	COG0113	porphobilinogen synthase activity
EMQ_RS05010	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
EMQ_RS05020	COG2205	protein histidine kinase activity
EMQ_RS05040	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
EMQ_RS05090	COG0521	Mo-molybdopterin cofactor biosynthetic process
EMQ_RS05100	COG1295	ribonuclease BN
EMQ_RS05110	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
EMQ_RS05115	COG0511	ligase activity, forming carbon-carbon bonds
EMQ_RS05120	COG0439	Biotin carboxylase
EMQ_RS05125	COG0138	bifunctional purine biosynthesis protein purh
EMQ_RS05135	COG3541	Predicted nucleotidyltransferase
EMQ_RS05140	COG0220	tRNA (guanine-N7-)-methyltransferase activity
EMQ_RS05145	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
EMQ_RS05150	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
EMQ_RS05155	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
EMQ_RS05160	COG0792	nuclease activity
EMQ_RS05170	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
EMQ_RS05175	COG0271	Belongs to the BolA IbaG family
EMQ_RS05180	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
EMQ_RS05185	COG0047	phosphoribosylformylglycinamidine synthase activity
EMQ_RS05195	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
EMQ_RS05200	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
EMQ_RS05205	COG0110	maltose O-acetyltransferase activity
EMQ_RS05210	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
EMQ_RS05215	COG4774	siderophore transport
EMQ_RS05220	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
EMQ_RS05230	COG0657	acetylesterase activity
EMQ_RS05240	COG2001	Belongs to the MraZ family
EMQ_RS05245	COG0275	rRNA processing
EMQ_RS05260	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
EMQ_RS05265	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
EMQ_RS05270	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
EMQ_RS05275	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
EMQ_RS05285	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
EMQ_RS05290	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
EMQ_RS05295	COG0812	UDP-N-acetylmuramate dehydrogenase activity
EMQ_RS05300	COG1181	Belongs to the D-alanine--D-alanine ligase family
EMQ_RS05305	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
EMQ_RS05310	COG0849	cell division
EMQ_RS05325	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
EMQ_RS05330	COG0497	DNA recombination
EMQ_RS05335	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
EMQ_RS05340	COG0574	Belongs to the PEP-utilizing enzyme family
EMQ_RS05340	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
EMQ_RS05345	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
EMQ_RS05360	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
EMQ_RS05385	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
EMQ_RS05395	COG3145	DNA-N1-methyladenine dioxygenase activity
EMQ_RS05415	COG0242	peptide deformylase activity
EMQ_RS05420	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
EMQ_RS05425	COG0101	tRNA pseudouridine synthase activity
EMQ_RS05460	COG2814	Major facilitator Superfamily
EMQ_RS05465	COG2837	iron assimilation
EMQ_RS05480	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
EMQ_RS05490	COG5441	Belongs to the UPF0261 family
EMQ_RS05495	COG5564	TIM-barrel signal transduction protein
EMQ_RS05505	COG0778	Nitroreductase
EMQ_RS05510	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
EMQ_RS05525	COG0667	Aldo Keto reductase
EMQ_RS05560	COG3645	SOS response
EMQ_RS05595	COG0438	transferase activity, transferring glycosyl groups
EMQ_RS05600	COG1215	transferase activity, transferring glycosyl groups
EMQ_RS05610	COG2003	Belongs to the UPF0758 family
EMQ_RS05615	COG2814	Major facilitator Superfamily
EMQ_RS05620	COG1566	PFAM secretion protein HlyD family protein
EMQ_RS05645	COG1987	bacterial-type flagellum assembly
EMQ_RS05650	COG1677	Flagellar hook-basal body complex protein FliE
EMQ_RS05655	COG1558	bacterial-type flagellum-dependent cell motility
EMQ_RS05660	COG1815	bacterial-type flagellum-dependent cell motility
EMQ_RS05670	COG1338	Plays a role in the flagellum-specific transport system
EMQ_RS05675	COG1136	(ABC) transporter
EMQ_RS05685	COG0442	prolyl-tRNA aminoacylation
EMQ_RS05700	COG0493	'glutamate synthase
EMQ_RS05720	COG1953	Uracil, thiamine, allantoin
EMQ_RS05735	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
EMQ_RS05745	COG1007	ATP synthesis coupled electron transport
EMQ_RS05765	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
EMQ_RS05770	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
EMQ_RS05775	COG1034	ATP synthesis coupled electron transport
EMQ_RS05785	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
EMQ_RS05790	COG0649	NAD binding
EMQ_RS05795	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
EMQ_RS05800	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
EMQ_RS05805	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
EMQ_RS05815	COG0776	regulation of translation
EMQ_RS05825	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
EMQ_RS05830	COG0740	serine-type endopeptidase activity
EMQ_RS05835	COG0544	peptidyl-prolyl cis-trans isomerase activity
EMQ_RS05845	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
EMQ_RS05845	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
EMQ_RS05855	COG0513	Belongs to the DEAD box helicase family
EMQ_RS05890	COG2814	Major facilitator Superfamily
EMQ_RS05915	COG5001	Diguanylate cyclase
EMQ_RS05915	COG3300	MHYT domain
EMQ_RS05920	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
EMQ_RS05930	COG3265	gluconokinase activity
EMQ_RS05935	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
EMQ_RS05940	COG0363	glucosamine-6-phosphate deaminase activity
EMQ_RS05945	COG0561	phosphatase activity
EMQ_RS05950	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
EMQ_RS05955	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
EMQ_RS05970	COG1570	exodeoxyribonuclease VII activity
EMQ_RS05980	COG0179	Fumarylacetoacetate (FAA) hydrolase
EMQ_RS05985	COG0438	transferase activity, transferring glycosyl groups
EMQ_RS05985	COG1216	Glycosyl transferase, family 2
EMQ_RS05995	COG1657	PFAM Prenyltransferase squalene oxidase
EMQ_RS06000	COG1233	COG1233 Phytoene dehydrogenase and related
EMQ_RS06005	COG1562	ergosterol biosynthetic process
EMQ_RS06010	COG1562	ergosterol biosynthetic process
EMQ_RS06015	COG1051	belongs to the nudix hydrolase family
EMQ_RS06025	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
EMQ_RS06035	COG0287	Prephenate dehydrogenase
EMQ_RS06055	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
EMQ_RS06065	COG0109	protoheme IX farnesyltransferase activity
EMQ_RS06075	COG2226	methyltransferase
EMQ_RS06085	COG0189	ligase activity
EMQ_RS06095	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
EMQ_RS06100	COG1360	Flagellar Motor Protein
EMQ_RS06115	COG1522	sequence-specific DNA binding
EMQ_RS06120	COG0492	ferredoxin-NADP+ reductase activity
EMQ_RS06125	COG0583	DNA-binding transcription factor activity
EMQ_RS06130	COG1321	iron dependent repressor
EMQ_RS06165	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
EMQ_RS06180	COG0616	signal peptide processing
EMQ_RS06185	COG0776	regulation of translation
EMQ_RS06200	COG0662	Cupin 2, conserved barrel domain protein
EMQ_RS06200	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
EMQ_RS06220	COG0291	Belongs to the bacterial ribosomal protein bL35 family
EMQ_RS06225	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
EMQ_RS06240	COG1607	acyl-coa hydrolase
EMQ_RS06245	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
EMQ_RS06250	COG0354	folic acid binding
EMQ_RS06255	COG0820	rRNA (adenine-C2-)-methyltransferase activity
EMQ_RS06260	COG0242	peptide deformylase activity
EMQ_RS06270	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
EMQ_RS06275	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
EMQ_RS06285	COG1722	exodeoxyribonuclease VII activity
EMQ_RS06305	COG1940	carbohydrate kinase activity
EMQ_RS06310	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
EMQ_RS06315	COG0316	Belongs to the HesB IscA family
EMQ_RS06320	COG2151	metal-sulfur cluster biosynthetic enzyme
EMQ_RS06330	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
EMQ_RS06335	COG0719	Fe-S assembly protein
EMQ_RS06340	COG0396	ATPase activity
EMQ_RS06345	COG0719	Fe-S assembly protein
EMQ_RS06350	COG1959	2 iron, 2 sulfur cluster binding
EMQ_RS06360	COG2733	membrane
EMQ_RS06380	COG0156	8-amino-7-oxononanoate synthase activity
EMQ_RS06400	COG0126	phosphoglycerate kinase activity
EMQ_RS06435	COG2205	protein histidine kinase activity
EMQ_RS06465	COG2223	nitrite transmembrane transporter activity
EMQ_RS06475	COG2146	nitrite reductase [NAD(P)H] activity
EMQ_RS06475	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
EMQ_RS06480	COG0243	molybdopterin cofactor binding
EMQ_RS06490	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
EMQ_RS06490	COG1116	anion transmembrane transporter activity
EMQ_RS06505	COG0803	Belongs to the bacterial solute-binding protein 9 family
EMQ_RS06525	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
EMQ_RS06530	COG0227	Belongs to the bacterial ribosomal protein bL28 family
EMQ_RS06540	COG5265	(ABC) transporter
EMQ_RS06560	COG2226	methyltransferase
EMQ_RS06560	COG0596	Alpha beta hydrolase
EMQ_RS06560	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
EMQ_RS06590	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
EMQ_RS06590	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
EMQ_RS06595	COG0737	Belongs to the 5'-nucleotidase family
EMQ_RS06600	COG3572	ergothioneine biosynthetic process
EMQ_RS06610	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
EMQ_RS06620	COG0513	Belongs to the DEAD box helicase family
EMQ_RS06625	COG4106	trans-aconitate 2-methyltransferase activity
EMQ_RS06625	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
EMQ_RS06635	COG0156	8-amino-7-oxononanoate synthase activity
EMQ_RS06640	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
EMQ_RS06645	COG0314	molybdopterin synthase activity
EMQ_RS06650	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
EMQ_RS06660	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
EMQ_RS06665	COG0322	excinuclease ABC activity
EMQ_RS06680	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
EMQ_RS06690	COG0745	RESPONSE REGULATOR receiver
EMQ_RS06715	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
EMQ_RS06720	COG1216	Glycosyl transferase, family 2
EMQ_RS06720	COG0438	transferase activity, transferring glycosyl groups
EMQ_RS06735	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
EMQ_RS06750	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
EMQ_RS06755	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
EMQ_RS06760	COG0355	proton-transporting ATP synthase activity, rotational mechanism
EMQ_RS06765	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
EMQ_RS06770	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
EMQ_RS06775	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
EMQ_RS06780	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
EMQ_RS06800	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
EMQ_RS06815	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
EMQ_RS06825	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
EMQ_RS06830	COG1053	succinate dehydrogenase
EMQ_RS06835	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
EMQ_RS06850	COG2824	Alkylphosphonate utilization operon protein PhnA
EMQ_RS06860	COG3920	Histidine kinase
EMQ_RS06860	COG2202	Pas domain
EMQ_RS06870	COG0488	(ABC) transporter
EMQ_RS06880	COG0628	permease
EMQ_RS06920	COG0006	proline dipeptidase activity
EMQ_RS06925	COG0473	3-isopropylmalate dehydrogenase activity
EMQ_RS07020	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
EMQ_RS07025	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
EMQ_RS07025	COG0072	phenylalanine-tRNA ligase activity
EMQ_RS07030	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
EMQ_RS07035	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
EMQ_RS07065	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
EMQ_RS07070	COG2203	Gaf domain
EMQ_RS07070	COG4251	negative regulation of phosphorylation
EMQ_RS07070	COG5001	Diguanylate cyclase
EMQ_RS07070	COG3706	GGDEF domain
EMQ_RS07090	COG0612	Peptidase, M16
EMQ_RS07095	COG0312	modulator of DNA gyrase
EMQ_RS07105	COG2755	lipolytic protein G-D-S-L family
EMQ_RS07105	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
EMQ_RS07115	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
EMQ_RS07120	COG1454	alcohol dehydrogenase
EMQ_RS07125	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
EMQ_RS07125	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
EMQ_RS07130	COG0194	GDP metabolic process
EMQ_RS07135	COG0300	oxidoreductase activity
EMQ_RS07140	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
EMQ_RS07155	COG0582	viral genome integration into host DNA
EMQ_RS07180	COG1804	L-carnitine dehydratase bile acid-inducible protein F
EMQ_RS07190	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
EMQ_RS07200	COG0583	DNA-binding transcription factor activity
EMQ_RS07205	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
EMQ_RS07205	COG2146	nitrite reductase [NAD(P)H] activity
EMQ_RS07210	COG0604	alcohol dehydrogenase
EMQ_RS07250	COG2814	Major facilitator Superfamily
EMQ_RS07255	COG2132	Multicopper oxidase
EMQ_RS07345	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
EMQ_RS07355	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
EMQ_RS07365	COG0583	DNA-binding transcription factor activity
EMQ_RS07370	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
EMQ_RS07375	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
EMQ_RS07435	COG0415	Belongs to the DNA photolyase family
EMQ_RS07465	COG1566	PFAM secretion protein HlyD family protein
EMQ_RS07510	COG0586	Pfam SNARE associated Golgi protein
EMQ_RS07515	COG1028	Short-chain dehydrogenase reductase Sdr
EMQ_RS07520	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
EMQ_RS07530	COG0140	phosphoribosyl-ATP diphosphatase activity
EMQ_RS07535	COG0107	imidazoleglycerol-phosphate synthase activity
EMQ_RS07540	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
EMQ_RS07545	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
EMQ_RS07555	COG0131	Imidazoleglycerol-phosphate dehydratase
EMQ_RS07560	COG3300	MHYT domain
EMQ_RS07560	COG5001	Diguanylate cyclase
EMQ_RS07580	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
EMQ_RS07605	COG1199	ATP-dependent helicase activity
EMQ_RS07650	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
EMQ_RS07665	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
EMQ_RS07690	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
EMQ_RS07695	COG0531	amino acid
EMQ_RS07700	COG1253	flavin adenine dinucleotide binding
EMQ_RS07705	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
EMQ_RS07710	COG1671	Belongs to the UPF0178 family
EMQ_RS07715	COG0438	transferase activity, transferring glycosyl groups
EMQ_RS07725	COG1597	lipid kinase activity
EMQ_RS07735	COG2326	polyphosphate kinase activity
EMQ_RS07740	COG4221	oxidoreductase activity
EMQ_RS07745	COG1678	Uncharacterized ACR, COG1678
EMQ_RS07770	COG1217	gtp-binding protein TYPA
EMQ_RS07795	COG2818	Glycosylase
EMQ_RS07800	COG0473	3-isopropylmalate dehydrogenase activity
EMQ_RS07815	COG1289	transmembrane transporter activity
EMQ_RS07820	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
EMQ_RS07830	COG2814	Major facilitator Superfamily
EMQ_RS07845	COG1612	heme a metabolic process
EMQ_RS07885	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
EMQ_RS07905	COG0489	protein tyrosine kinase activity
EMQ_RS07920	COG0741	lytic transglycosylase activity
EMQ_RS07925	COG1573	uracil-dna glycosylase
EMQ_RS07945	COG1215	transferase activity, transferring glycosyl groups
EMQ_RS07980	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
EMQ_RS07985	COG0066	3-isopropylmalate dehydratase activity
EMQ_RS07995	COG0778	Nitroreductase
EMQ_RS08000	COG3042	response to heat
EMQ_RS08010	COG0581	inorganic phosphate transmembrane transporter activity
EMQ_RS08015	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
EMQ_RS08025	COG0745	RESPONSE REGULATOR receiver
EMQ_RS08035	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
EMQ_RS08045	COG0335	large ribosomal subunit rRNA binding
EMQ_RS08050	COG0336	Belongs to the RNA methyltransferase TrmD family
EMQ_RS08055	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
EMQ_RS08060	COG0228	four-way junction DNA binding
EMQ_RS08085	COG0316	Belongs to the HesB IscA family
EMQ_RS08105	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
EMQ_RS08115	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
EMQ_RS08130	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
EMQ_RS08135	COG1942	4-Oxalocrotonate Tautomerase
EMQ_RS08145	COG4303	Ethanolamine ammonia lyase large subunit
EMQ_RS08150	COG4302	ethanolamine ammonia-lyase activity
EMQ_RS08155	COG0531	amino acid
EMQ_RS08165	COG0232	Belongs to the dGTPase family. Type 2 subfamily
EMQ_RS08175	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
EMQ_RS08185	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
EMQ_RS08210	COG3660	Nucleoside-diphosphate-sugar epimerase
EMQ_RS08215	COG0148	phosphopyruvate hydratase activity
EMQ_RS08225	COG0267	Belongs to the bacterial ribosomal protein bL33 family
EMQ_RS08230	COG0303	'Molybdopterin
EMQ_RS08245	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
EMQ_RS08250	COG0285	dihydrofolate synthase activity
EMQ_RS08265	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
EMQ_RS08275	COG1177	transmembrane transport
EMQ_RS08280	COG1176	ABC-type spermidine putrescine transport system, permease component I
EMQ_RS08285	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
EMQ_RS08325	COG0848	biopolymer transport protein
EMQ_RS08340	COG4774	siderophore transport
EMQ_RS08345	COG3128	pkhd-type hydroxylase
EMQ_RS08355	COG0167	dihydroorotate dehydrogenase activity
EMQ_RS08360	COG5487	UPF0391 membrane protein
EMQ_RS08370	COG1116	anion transmembrane transporter activity
EMQ_RS08385	COG0203	ribosomal protein L17
EMQ_RS08390	COG0202	RNA polymerase activity
EMQ_RS08395	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
EMQ_RS08400	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
EMQ_RS08405	COG0563	adenylate kinase activity
EMQ_RS08410	COG0201	protein transport
EMQ_RS08415	COG0200	Binds to the 23S rRNA
EMQ_RS08420	COG1841	ribosomal large subunit assembly
EMQ_RS08425	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
EMQ_RS08430	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
EMQ_RS08435	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
EMQ_RS08440	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
EMQ_RS08445	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
EMQ_RS08450	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
EMQ_RS08455	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
EMQ_RS08460	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
EMQ_RS08465	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
EMQ_RS08470	COG0255	Belongs to the universal ribosomal protein uL29 family
EMQ_RS08475	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
EMQ_RS08480	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
EMQ_RS08485	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
EMQ_RS08490	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
EMQ_RS08495	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
EMQ_RS08500	COG0089	rRNA binding
EMQ_RS08505	COG0088	Forms part of the polypeptide exit tunnel
EMQ_RS08510	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
EMQ_RS08515	COG0051	transcription antitermination factor activity, RNA binding
EMQ_RS08520	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
EMQ_RS08525	COG0049	tRNA binding
EMQ_RS08530	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
EMQ_RS08535	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
EMQ_RS08545	COG0085	RNA polymerase activity
EMQ_RS08550	COG0222	ribosome binding
EMQ_RS08555	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
EMQ_RS08560	COG0081	regulation of translation
EMQ_RS08565	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
EMQ_RS08580	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
EMQ_RS08585	COG0235	Class ii aldolase
EMQ_RS08590	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
EMQ_RS08595	COG4229	Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene)
EMQ_RS08600	COG0196	riboflavin kinase activity
EMQ_RS08610	COG4716	Myosin-crossreactive antigen
EMQ_RS08655	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
EMQ_RS08660	COG2943	transferase activity, transferring hexosyl groups
EMQ_RS08685	COG0658	competence protein
EMQ_RS08685	COG2333	competence protein COMEC
EMQ_RS08705	COG0483	inositol monophosphate 1-phosphatase activity
EMQ_RS08710	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
EMQ_RS08725	COG0776	regulation of translation
EMQ_RS08730	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
EMQ_RS08735	COG0416	fatty acid biosynthetic process
EMQ_RS08740	COG0333	Belongs to the bacterial ribosomal protein bL32 family
EMQ_RS08760	COG0745	RESPONSE REGULATOR receiver
EMQ_RS08775	COG0242	peptide deformylase activity
EMQ_RS08780	COG0828	Belongs to the bacterial ribosomal protein bS21 family
EMQ_RS08830	COG1410	methionine synthase
EMQ_RS08830	COG0646	methionine synthase
EMQ_RS08835	COG2132	Multicopper oxidase
EMQ_RS08845	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
EMQ_RS08850	COG0492	ferredoxin-NADP+ reductase activity
EMQ_RS08855	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
EMQ_RS08860	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
EMQ_RS08865	COG2814	Major facilitator Superfamily
EMQ_RS08880	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
EMQ_RS08890	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
EMQ_RS08900	COG0598	Magnesium transport protein CorA
EMQ_RS08915	COG1091	dTDP-4-dehydrorhamnose reductase activity
EMQ_RS08925	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
EMQ_RS08960	COG0587	DNA-directed DNA polymerase activity
EMQ_RS09005	COG2217	Heavy metal translocating P-type atpase
EMQ_RS09010	COG1937	Protein conserved in bacteria
EMQ_RS09020	COG2132	Multicopper oxidase
EMQ_RS09040	COG1017	nitric oxide dioxygenase activity
EMQ_RS09040	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
EMQ_RS09045	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
EMQ_RS09125	COG5489	Protein of unknown function (DUF736)
EMQ_RS09165	COG1192	Involved in chromosome partitioning
EMQ_RS09195	COG0741	lytic transglycosylase activity
EMQ_RS09220	COG0431	NADPH-dependent FMN reductase
EMQ_RS09225	COG2072	flavoprotein involved in K transport
EMQ_RS09290	COG0789	Transcriptional regulator
EMQ_RS09305	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
EMQ_RS09310	COG0789	Transcriptional regulator
EMQ_RS09345	COG4962	Type ii secretion system protein e
EMQ_RS09360	COG3451	type IV secretory pathway VirB4
EMQ_RS09395	COG0583	DNA-binding transcription factor activity
EMQ_RS09405	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
EMQ_RS09410	COG0583	DNA-binding transcription factor activity
EMQ_RS09415	COG1028	Short-chain dehydrogenase reductase Sdr
EMQ_RS09430	COG0523	cobalamin synthesis protein
EMQ_RS09445	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
EMQ_RS09455	COG2814	Major facilitator Superfamily
EMQ_RS09465	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
EMQ_RS09475	COG2897	thiosulfate sulfurtransferase activity
EMQ_RS09485	COG0628	permease
EMQ_RS09500	COG3047	cAMP biosynthetic process
EMQ_RS09505	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
EMQ_RS09515	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
EMQ_RS09525	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
EMQ_RS09550	COG0404	The glycine cleavage system catalyzes the degradation of glycine
EMQ_RS09560	COG0404	The glycine cleavage system catalyzes the degradation of glycine
EMQ_RS09565	COG2113	Glycine betaine
EMQ_RS09570	COG3448	diguanylate cyclase activity
EMQ_RS09570	COG4175	Glycine betaine
EMQ_RS09575	COG4176	ABC-type proline glycine betaine transport system permease component
EMQ_RS09595	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
EMQ_RS09610	COG0404	The glycine cleavage system catalyzes the degradation of glycine
EMQ_RS09610	COG0446	pyridine nucleotide-disulphide oxidoreductase
EMQ_RS09615	COG4311	Sarcosine oxidase, delta subunit
EMQ_RS09620	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
EMQ_RS09635	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
EMQ_RS09640	COG2218	PFAM glutamate synthase alpha subunit domain protein
EMQ_RS09645	COG0069	glutamate synthase activity
EMQ_RS09655	COG0004	ammonium transporteR
EMQ_RS09660	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
EMQ_RS09685	COG0284	orotidine-5'-phosphate decarboxylase activity
EMQ_RS09715	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
EMQ_RS09720	COG0602	queuosine metabolic process
EMQ_RS09725	COG1742	UPF0060 membrane protein
EMQ_RS09740	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
EMQ_RS09765	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
EMQ_RS09770	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
EMQ_RS09775	COG0583	DNA-binding transcription factor activity
EMQ_RS09785	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
EMQ_RS09790	COG0129	dihydroxy-acid dehydratase activity
EMQ_RS09800	COG2070	2-Nitropropane dioxygenase
EMQ_RS09805	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
EMQ_RS09830	COG3128	pkhd-type hydroxylase
EMQ_RS09845	COG1959	2 iron, 2 sulfur cluster binding
EMQ_RS09865	COG0513	Belongs to the DEAD box helicase family
EMQ_RS09875	COG2813	Specifically methylates the guanine in position
EMQ_RS09875	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
EMQ_RS09880	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
EMQ_RS09890	COG3088	subunit of a heme lyase
EMQ_RS09895	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
EMQ_RS09900	COG1138	Cytochrome C-type biogenesis protein
EMQ_RS09905	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
EMQ_RS09915	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
EMQ_RS09955	COG0402	S-adenosylhomocysteine deaminase activity
EMQ_RS09980	COG2375	cellular response to nickel ion
EMQ_RS09985	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
EMQ_RS10000	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
EMQ_RS10005	COG0408	coproporphyrinogen oxidase activity
EMQ_RS10015	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
EMQ_RS10020	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
EMQ_RS10030	COG1660	Displays ATPase and GTPase activities
EMQ_RS10035	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
EMQ_RS10055	COG0297	glycogen (starch) synthase activity
EMQ_RS10085	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
EMQ_RS10090	COG0805	protein transport
EMQ_RS10095	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
EMQ_RS10105	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
EMQ_RS10110	COG0022	dehydrogenase e1 component
EMQ_RS10115	COG0596	Alpha beta hydrolase
EMQ_RS10115	COG0508	dehydrogenase complex catalyzes the overall conversion of
EMQ_RS10120	COG1028	Short-chain dehydrogenase reductase Sdr
EMQ_RS10130	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
EMQ_RS10150	COG0343	queuine tRNA-ribosyltransferase activity
EMQ_RS10160	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
EMQ_RS10175	COG1733	regulation of RNA biosynthetic process
EMQ_RS10180	COG0702	epimerase
EMQ_RS10200	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
EMQ_RS10205	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
EMQ_RS10225	COG0484	heat shock protein binding
EMQ_RS10230	COG0443	Heat shock 70 kDa protein
EMQ_RS10240	COG0745	RESPONSE REGULATOR receiver
EMQ_RS10245	COG0642	Histidine kinase
EMQ_RS10250	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
EMQ_RS10260	COG1643	Atp-dependent helicase
EMQ_RS10265	COG4232	protein-disulfide reductase activity
EMQ_RS10290	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
EMQ_RS10295	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
EMQ_RS10300	COG0445	tRNA wobble uridine modification
EMQ_RS10305	COG0357	Ribosomal RNA small subunit methyltransferase G
EMQ_RS10355	COG0582	viral genome integration into host DNA
EMQ_RS10360	COG1396	sequence-specific DNA binding
EMQ_RS10365	COG4683	PFAM Phage derived protein Gp49-like (DUF891)
EMQ_RS10495	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
EMQ_RS10525	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
EMQ_RS10530	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
EMQ_RS10540	COG1129	ABC transporter
EMQ_RS10560	COG0784	Response regulator, receiver
EMQ_RS10560	COG5002	protein histidine kinase activity
EMQ_RS10560	COG2198	Histidine kinase
EMQ_RS10570	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
EMQ_RS10575	COG1914	H( )-stimulated, divalent metal cation uptake system
EMQ_RS10580	COG0436	Aminotransferase
EMQ_RS10590	COG2814	Major facilitator Superfamily
EMQ_RS10625	COG1981	membrane
EMQ_RS10630	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
EMQ_RS10635	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
EMQ_RS10640	COG0424	maF-like protein
EMQ_RS10650	COG1505	serine-type exopeptidase activity
EMQ_RS10670	COG0482	sulfurtransferase activity
EMQ_RS10680	COG1104	cysteine desulfurase activity
EMQ_RS10685	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
EMQ_RS10690	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
EMQ_RS10710	COG1120	ATPase activity
EMQ_RS10715	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
EMQ_RS10720	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
EMQ_RS10725	COG1959	2 iron, 2 sulfur cluster binding
EMQ_RS10730	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
EMQ_RS10735	COG0859	PFAM glycosyl transferase family 9
EMQ_RS10760	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
EMQ_RS10775	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
EMQ_RS10790	COG0431	NADPH-dependent FMN reductase
EMQ_RS10825	COG1566	PFAM secretion protein HlyD family protein
EMQ_RS10830	COG2814	Major facilitator Superfamily
EMQ_RS10845	COG2091	lysine biosynthetic process via aminoadipic acid
EMQ_RS10855	COG0488	(ABC) transporter
EMQ_RS10865	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
EMQ_RS10885	COG4993	Dehydrogenase
EMQ_RS10895	COG1393	Belongs to the ArsC family
EMQ_RS10915	COG1294	oxidase, subunit
EMQ_RS10920	COG1271	oxidase subunit
EMQ_RS10940	COG1278	Cold shock
EMQ_RS10950	COG1881	PFAM PEBP family protein
EMQ_RS11010	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
EMQ_RS11020	COG0246	Mannitol dehydrogenase
EMQ_RS11025	COG1090	epimerase
EMQ_RS11050	COG0519	Catalyzes the synthesis of GMP from XMP
EMQ_RS11050	COG0518	GMP synthase (glutamine-hydrolyzing) activity
EMQ_RS11055	COG3093	addiction module antidote protein HigA
EMQ_RS11110	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
EMQ_RS11115	COG0156	8-amino-7-oxononanoate synthase activity
EMQ_RS11120	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
EMQ_RS11125	COG0318	PFAM AMP-dependent synthetase and ligase
EMQ_RS11220	COG5489	Protein of unknown function (DUF736)
EMQ_RS11225	COG1476	TRANSCRIPTIONal
EMQ_RS11280	COG2267	carboxylic ester hydrolase activity
EMQ_RS11355	COG0450	alkyl hydroperoxide reductase
EMQ_RS11365	COG4988	ABC transporter
EMQ_RS11370	COG1132	(ABC) transporter
EMQ_RS11375	COG1271	oxidase subunit
EMQ_RS11380	COG1294	oxidase, subunit
EMQ_RS11405	COG3290	protein histidine kinase activity
EMQ_RS11415	COG1595	DNA-templated transcription, initiation
EMQ_RS11485	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
EMQ_RS11510	COG1116	anion transmembrane transporter activity
EMQ_RS11515	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
EMQ_RS11520	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
EMQ_RS11525	COG1960	acyl-CoA dehydrogenase activity
EMQ_RS11545	COG0753	catalase activity
EMQ_RS11555	COG1012	belongs to the aldehyde dehydrogenase family
EMQ_RS11570	COG1194	a g-specific adenine glycosylase
EMQ_RS11580	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
EMQ_RS11615	COG1797	cobyrinic acid a,c-diamide synthase activity
EMQ_RS11625	COG1492	cobalamin metabolic process
EMQ_RS11640	COG1289	transmembrane transporter activity
EMQ_RS11655	COG0305	Participates in initiation and elongation during chromosome replication
EMQ_RS11675	COG0009	L-threonylcarbamoyladenylate synthase
EMQ_RS11685	COG2814	Major facilitator Superfamily
EMQ_RS11695	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
EMQ_RS11705	COG0656	L-ascorbic acid biosynthetic process
EMQ_RS11795	COG0517	IMP dehydrogenase activity
EMQ_RS11800	COG4974	Belongs to the 'phage' integrase family
EMQ_RS11840	COG5489	Protein of unknown function (DUF736)
EMQ_RS11875	COG1192	Involved in chromosome partitioning
EMQ_RS11905	COG0741	lytic transglycosylase activity
EMQ_RS11950	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
EMQ_RS11980	COG4962	Type ii secretion system protein e
EMQ_RS11985	COG3838	Conjugal transfer protein Trbc
EMQ_RS11995	COG3451	type IV secretory pathway VirB4
EMQ_RS12010	COG3846	protein secretion by the type IV secretion system
EMQ_RS12025	COG2948	multi-organism process
EMQ_RS12035	COG0583	DNA-binding transcription factor activity
EMQ_RS12040	COG1309	transcriptional regulator
EMQ_RS12045	COG0667	Aldo Keto reductase
EMQ_RS12050	COG1028	Short-chain dehydrogenase reductase Sdr
EMQ_RS12060	COG1028	Short-chain dehydrogenase reductase Sdr
EMQ_RS12070	COG2814	Major facilitator Superfamily
EMQ_RS12095	COG0583	DNA-binding transcription factor activity
EMQ_RS12100	COG0583	DNA-binding transcription factor activity
EMQ_RS12105	COG4221	oxidoreductase activity
EMQ_RS12155	COG0318	PFAM AMP-dependent synthetase and ligase
EMQ_RS12170	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
EMQ_RS12180	COG2226	methyltransferase
EMQ_RS12185	COG1368	sulfuric ester hydrolase activity
EMQ_RS12205	COG0018	arginyl-trna synthetase
EMQ_RS12215	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
EMQ_RS12220	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
EMQ_RS12235	COG0495	leucyl-tRNA aminoacylation
EMQ_RS12260	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
EMQ_RS12280	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
EMQ_RS12300	COG0604	alcohol dehydrogenase
EMQ_RS12305	COG0251	oxidation-reduction process
EMQ_RS12320	COG2755	lipolytic protein G-D-S-L family
EMQ_RS12320	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
EMQ_RS12345	COG1012	belongs to the aldehyde dehydrogenase family
EMQ_RS12360	COG2831	hemolysin activation secretion protein
EMQ_RS12365	COG3210	domain, Protein
EMQ_RS12390	COG0564	pseudouridine synthase activity
EMQ_RS12400	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
EMQ_RS12405	COG0667	Aldo Keto reductase
EMQ_RS12410	COG1420	regulation of RNA biosynthetic process
EMQ_RS12440	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
EMQ_RS12455	COG0469	pyruvate kinase activity
EMQ_RS12460	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
EMQ_RS12465	COG0351	phosphomethylpyrimidine kinase
EMQ_RS12465	COG0352	thiamine-phosphate diphosphorylase activity
EMQ_RS12485	COG0802	atpase or kinase
EMQ_RS12490	COG2887	Belongs to the helicase family. UvrD subfamily
EMQ_RS12495	COG1074	ATP-dependent DNA helicase activity
EMQ_RS12515	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
EMQ_RS12520	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
EMQ_RS12530	COG0508	dehydrogenase complex catalyzes the overall conversion of
EMQ_RS12535	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
EMQ_RS12565	COG2875	Belongs to the precorrin methyltransferase family
EMQ_RS12580	COG2099	Precorrin-6x reductase
EMQ_RS12615	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
EMQ_RS12635	COG3830	Belongs to the UPF0237 family
EMQ_RS12635	COG0560	Phosphoserine phosphatase
EMQ_RS12640	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
EMQ_RS12645	COG0028	Belongs to the TPP enzyme family
EMQ_RS12655	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
EMQ_RS12685	COG0436	Aminotransferase
EMQ_RS12700	COG0511	ligase activity, forming carbon-carbon bonds
EMQ_RS12705	COG4221	oxidoreductase activity
EMQ_RS12710	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
EMQ_RS12715	COG1984	allophanate hydrolase subunit 2
EMQ_RS12720	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
EMQ_RS12725	COG0697	spore germination
EMQ_RS12730	COG2271	Major facilitator Superfamily
EMQ_RS12770	COG0133	tryptophan synthase activity
EMQ_RS12775	COG0159	tryptophan synthase activity
EMQ_RS12805	COG2983	Belongs to the UPF0260 family
EMQ_RS12850	COG0492	ferredoxin-NADP+ reductase activity
EMQ_RS12855	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
EMQ_RS12860	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
EMQ_RS12870	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
EMQ_RS12870	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
EMQ_RS12870	COG0506	proline dehydrogenase activity
EMQ_RS12875	COG0655	NAD(P)H dehydrogenase (quinone) activity
EMQ_RS12880	COG0583	DNA-binding transcription factor activity
EMQ_RS12895	COG0307	riboflavin synthase, alpha
EMQ_RS12900	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
EMQ_RS12900	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
EMQ_RS12905	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
EMQ_RS12915	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
EMQ_RS12920	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
EMQ_RS12970	COG1252	NADH dehydrogenase
EMQ_RS12990	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
EMQ_RS12990	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
EMQ_RS12995	COG0509	glycine decarboxylation via glycine cleavage system
EMQ_RS13000	COG0404	The glycine cleavage system catalyzes the degradation of glycine
EMQ_RS13005	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
EMQ_RS13010	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
EMQ_RS13030	COG0776	regulation of translation
EMQ_RS13065	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
EMQ_RS13085	COG2096	Adenosyltransferase
EMQ_RS13110	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
EMQ_RS13120	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
EMQ_RS13145	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
EMQ_RS13150	COG1758	RNA polymerase activity
EMQ_RS13155	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
EMQ_RS13160	COG0736	holo-[acyl-carrier-protein] synthase activity
EMQ_RS13165	COG0681	Belongs to the peptidase S26 family
EMQ_RS13170	COG0571	ribonuclease III activity
EMQ_RS13175	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
EMQ_RS13180	COG0528	UMP kinase activity
EMQ_RS13185	COG0233	cytoplasmic translational termination
EMQ_RS13190	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
EMQ_RS13195	COG0575	Belongs to the CDS family
EMQ_RS13200	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
EMQ_RS13205	COG0750	zinc metalloprotease
EMQ_RS13210	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
EMQ_RS13220	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
EMQ_RS13225	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
EMQ_RS13230	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
EMQ_RS13235	COG3494	Protein of unknown function (DUF1009)
EMQ_RS13245	COG0346	lactoylglutathione lyase activity
EMQ_RS13255	COG0230	Belongs to the bacterial ribosomal protein bL34 family
EMQ_RS13260	COG0594	ribonuclease P activity
EMQ_RS13265	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
EMQ_RS13270	COG0706	membrane insertase activity
EMQ_RS13275	COG0218	Necessary for normal cell division and for the maintenance of normal septation
EMQ_RS13280	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
EMQ_RS13295	COG0670	Belongs to the BI1 family
EMQ_RS13315	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
EMQ_RS13335	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
EMQ_RS13350	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
EMQ_RS13360	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
EMQ_RS13380	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
EMQ_RS13405	COG0815	Transfers the fatty acyl group on membrane lipoproteins
EMQ_RS13410	COG1396	sequence-specific DNA binding
EMQ_RS13420	COG0629	single-stranded DNA binding
EMQ_RS13425	COG1529	Aldehyde oxidase and xanthine dehydrogenase
EMQ_RS13425	COG2010	Cytochrome c
EMQ_RS13440	COG0326	Molecular chaperone. Has ATPase activity
EMQ_RS13450	COG0488	(ABC) transporter
EMQ_RS13455	COG0784	Response regulator, receiver
EMQ_RS13520	COG0446	pyridine nucleotide-disulphide oxidoreductase
EMQ_RS13520	COG1902	pentaerythritol trinitrate reductase activity
EMQ_RS13570	COG5489	Protein of unknown function (DUF736)
EMQ_RS13580	COG1476	TRANSCRIPTIONal
EMQ_RS13665	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
EMQ_RS13685	COG1271	oxidase subunit
EMQ_RS13690	COG1294	oxidase, subunit
EMQ_RS13705	COG0243	molybdopterin cofactor binding
EMQ_RS13710	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
EMQ_RS13715	COG0315	cyclic pyranopterin monophosphate synthase activity
EMQ_RS13715	COG0746	molybdenum cofactor guanylyltransferase activity
EMQ_RS13725	COG0314	molybdopterin synthase activity
EMQ_RS13730	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
EMQ_RS13750	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
EMQ_RS13760	COG4786	Flagellar basal body rod
EMQ_RS13765	COG4786	Flagellar basal body rod
EMQ_RS13775	COG0778	Nitroreductase
EMQ_RS13800	COG0477	Major facilitator Superfamily
EMQ_RS13820	COG1322	Protein conserved in bacteria
EMQ_RS13825	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
EMQ_RS13850	COG1877	trehalose-phosphatase activity
EMQ_RS13855	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
EMQ_RS13860	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
EMQ_RS13875	COG0542	response to heat
EMQ_RS13890	COG3038	cytochrome b561
EMQ_RS13910	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
EMQ_RS13930	COG2072	flavoprotein involved in K transport
EMQ_RS14025	COG2932	Transcriptional regulator
EMQ_RS14035	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
EMQ_RS14040	COG1116	anion transmembrane transporter activity
EMQ_RS14045	COG0864	Transcriptional regulator
EMQ_RS14055	COG3665	Urea carboxylase-associated protein
EMQ_RS14075	COG2072	flavoprotein involved in K transport
EMQ_RS14090	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
EMQ_RS14100	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
EMQ_RS14110	COG0583	DNA-binding transcription factor activity
EMQ_RS14115	COG1126	abc transporter atp-binding protein
EMQ_RS14160	COG0538	isocitrate dehydrogenase activity
EMQ_RS14180	COG0328	RNA-DNA hybrid ribonuclease activity
EMQ_RS14185	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
EMQ_RS14190	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
EMQ_RS14200	COG0405	Gamma-glutamyltransferase
EMQ_RS14215	COG0436	Aminotransferase
EMQ_RS14230	COG3956	TIGRFAM MazG family protein
EMQ_RS14235	COG1733	regulation of RNA biosynthetic process
EMQ_RS14245	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
EMQ_RS14265	COG2207	Transcriptional regulator
EMQ_RS14270	COG1028	Short-chain dehydrogenase reductase Sdr
EMQ_RS14275	COG3118	belongs to the thioredoxin family
EMQ_RS14280	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
EMQ_RS14285	COG2835	tetraacyldisaccharide 4'-kinase activity
EMQ_RS14295	COG1032	radical SAM domain protein
EMQ_RS14325	COG1596	polysaccharide export
EMQ_RS14330	COG3750	Belongs to the UPF0335 family
EMQ_RS14335	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
EMQ_RS14350	COG0406	alpha-ribazole phosphatase activity
EMQ_RS14355	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
EMQ_RS14360	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
EMQ_RS14395	COG4988	ABC transporter
EMQ_RS14400	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
EMQ_RS14410	COG0514	ATP-dependent DNA helicase (RecQ)
EMQ_RS14430	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
EMQ_RS14440	COG0438	transferase activity, transferring glycosyl groups
EMQ_RS14455	COG0438	transferase activity, transferring glycosyl groups
EMQ_RS14465	COG2205	protein histidine kinase activity
EMQ_RS14490	COG1113	amino acid transport
EMQ_RS14495	COG2175	clavaminate synthase activity
EMQ_RS14520	COG1053	succinate dehydrogenase
EMQ_RS14530	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
EMQ_RS14535	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
EMQ_RS14540	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
EMQ_RS14565	COG0516	GMP reductase activity
EMQ_RS14565	COG0517	IMP dehydrogenase activity
EMQ_RS14570	COG1007	ATP synthesis coupled electron transport
EMQ_RS14585	COG0713	ATP synthesis coupled electron transport
EMQ_RS14590	COG0839	Belongs to the complex I subunit 6 family
EMQ_RS14595	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
EMQ_RS14600	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
EMQ_RS14605	COG1034	ATP synthesis coupled electron transport
EMQ_RS14615	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
EMQ_RS14620	COG0649	NAD binding
EMQ_RS14620	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
EMQ_RS14625	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
EMQ_RS14630	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
EMQ_RS14655	COG0740	serine-type endopeptidase activity
EMQ_RS14670	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
EMQ_RS14675	COG1766	The M ring may be actively involved in energy transduction
EMQ_RS14680	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
EMQ_RS14690	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
EMQ_RS14695	COG2204	response regulator
EMQ_RS14700	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
EMQ_RS14710	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
EMQ_RS14715	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
EMQ_RS14720	COG1137	ATPase activity
EMQ_RS14770	COG0667	Aldo Keto reductase
EMQ_RS14775	COG3525	Glycosyl hydrolase, family 20, catalytic domain
EMQ_RS14800	COG0582	viral genome integration into host DNA
EMQ_RS14920	COG1434	Gram-negative-bacterium-type cell wall biogenesis
EMQ_RS14925	COG1335	isochorismatase
EMQ_RS14930	COG1744	ABC transporter substrate-binding protein PnrA-like
EMQ_RS14935	COG3845	ABC transporter
EMQ_RS14945	COG1079	Belongs to the binding-protein-dependent transport system permease family
EMQ_RS14955	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
EMQ_RS14955	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
EMQ_RS14960	COG1372	Participates in initiation and elongation during chromosome replication
EMQ_RS14960	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
EMQ_RS14970	COG2244	polysaccharide biosynthetic process
EMQ_RS14975	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
EMQ_RS14980	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
EMQ_RS14990	COG2351	hydroxyisourate hydrolase activity
EMQ_RS15005	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
EMQ_RS15035	COG0583	DNA-binding transcription factor activity
EMQ_RS15055	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
EMQ_RS15060	COG0402	S-adenosylhomocysteine deaminase activity
EMQ_RS15105	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
EMQ_RS15115	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
EMQ_RS15125	COG0181	hydroxymethylbilane synthase activity
EMQ_RS15130	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
EMQ_RS15155	COG0583	DNA-binding transcription factor activity
EMQ_RS15165	COG0004	ammonium transporteR
EMQ_RS15190	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
EMQ_RS15195	COG0840	transmembrane signaling receptor activity
EMQ_RS15205	COG2198	Histidine kinase
EMQ_RS15205	COG0643	Histidine kinase
EMQ_RS15210	COG0835	chemotaxis
EMQ_RS15215	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
EMQ_RS15220	COG2201	protein-glutamate methylesterase activity
EMQ_RS15225	COG0745	RESPONSE REGULATOR receiver
EMQ_RS15230	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
EMQ_RS15240	COG0488	(ABC) transporter
EMQ_RS15245	COG0105	UTP biosynthetic process
EMQ_RS15265	COG2706	6-phosphogluconolactonase activity
EMQ_RS15270	COG0281	malic enzyme
EMQ_RS15280	COG0215	cysteine-tRNA ligase activity
EMQ_RS15295	COG1621	beta-fructofuranosidase activity
EMQ_RS15295	COG3583	domain protein
EMQ_RS15295	COG5492	domain, Protein
EMQ_RS15320	COG0446	pyridine nucleotide-disulphide oxidoreductase
EMQ_RS15320	COG0404	The glycine cleavage system catalyzes the degradation of glycine
EMQ_RS15330	COG1760	l-serine dehydratase
EMQ_RS15335	COG4638	Rieske (2fe-2S)
EMQ_RS15350	COG1902	pentaerythritol trinitrate reductase activity
EMQ_RS15350	COG0446	pyridine nucleotide-disulphide oxidoreductase
EMQ_RS15355	COG2181	nitrate reductase activity
EMQ_RS15355	COG0247	lactate metabolic process
EMQ_RS15370	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
EMQ_RS15375	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
EMQ_RS15400	COG0583	DNA-binding transcription factor activity
EMQ_RS15435	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
EMQ_RS15440	COG3153	acetyltransferase
EMQ_RS15440	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
EMQ_RS15455	COG1012	belongs to the aldehyde dehydrogenase family
EMQ_RS15465	COG4175	Glycine betaine
EMQ_RS15475	COG0735	belongs to the Fur family
EMQ_RS15510	COG3588	fructose-bisphosphate aldolase
EMQ_RS15515	COG3961	Belongs to the TPP enzyme family
EMQ_RS15520	COG0247	lactate metabolic process
EMQ_RS15525	COG1139	Iron-sulfur cluster binding protein
EMQ_RS15560	COG0052	Belongs to the universal ribosomal protein uS2 family
EMQ_RS15565	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
EMQ_RS15570	COG1381	Involved in DNA repair and RecF pathway recombination
EMQ_RS15585	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
EMQ_RS15610	COG0649	NAD binding
EMQ_RS15615	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
EMQ_RS15620	COG1183	phosphatidylcholine synthase activity
EMQ_RS15625	COG0688	phosphatidylethanolamine metabolic process
EMQ_RS15645	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
EMQ_RS15670	COG2884	Cell division ATP-binding protein ftsE
EMQ_RS15690	COG2081	HI0933 family
EMQ_RS15695	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
EMQ_RS15700	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
EMQ_RS15710	COG0628	permease
EMQ_RS15715	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
EMQ_RS15720	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
EMQ_RS15745	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
EMQ_RS15750	COG1127	ABC transporter
EMQ_RS15755	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
EMQ_RS15760	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
EMQ_RS15785	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
EMQ_RS15790	COG0583	DNA-binding transcription factor activity
EMQ_RS15795	COG4771	TonB-dependent receptor
EMQ_RS15810	COG0668	transmembrane transport
EMQ_RS15815	COG1714	RDD family
EMQ_RS15820	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
EMQ_RS15825	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
EMQ_RS15830	COG0653	protein targeting
EMQ_RS15835	COG0217	transcriptional regulatory protein
EMQ_RS15845	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
EMQ_RS15855	COG2877	3-deoxy-8-phosphooctulonate synthase activity
EMQ_RS15860	COG0504	CTP synthase activity
EMQ_RS15875	COG0149	triose-phosphate isomerase activity
EMQ_RS15890	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
EMQ_RS15895	COG0633	Ferredoxin
EMQ_RS15895	COG3217	Mosc domain protein beta barrel domain protein
EMQ_RS15900	COG0306	phosphate transporter
EMQ_RS15950	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
EMQ_RS15955	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
EMQ_RS15960	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
EMQ_RS15975	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
EMQ_RS15985	COG0386	Belongs to the glutathione peroxidase family
EMQ_RS15990	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
EMQ_RS16030	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
EMQ_RS16035	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
EMQ_RS16040	COG4206	TonB-dependent receptor
EMQ_RS16050	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
EMQ_RS16055	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
EMQ_RS16070	COG0742	ribosomal rna small subunit methyltransferase
EMQ_RS16075	COG1187	pseudouridine synthase activity
EMQ_RS16080	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
EMQ_RS16090	COG0590	tRNA wobble adenosine to inosine editing
EMQ_RS16105	COG0523	cobalamin synthesis protein
EMQ_RS16120	COG1351	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant
EMQ_RS16135	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
EMQ_RS16135	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
EMQ_RS16155	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
EMQ_RS16160	COG2945	thiolester hydrolase activity
EMQ_RS16170	COG3394	polysaccharide catabolic process
EMQ_RS16175	COG0635	Involved in the biosynthesis of porphyrin-containing compound
EMQ_RS16190	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
EMQ_RS16195	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
EMQ_RS16200	COG1253	flavin adenine dinucleotide binding
EMQ_RS16205	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
EMQ_RS16210	COG4133	protoheme IX ABC transporter activity
EMQ_RS16215	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
EMQ_RS16220	COG1126	abc transporter atp-binding protein
EMQ_RS16225	COG0765	amino acid transport
EMQ_RS16230	COG0583	DNA-binding transcription factor activity
EMQ_RS16240	COG0542	response to heat
EMQ_RS16250	COG0779	Required for maturation of 30S ribosomal subunits
EMQ_RS16265	COG5373	membrane
EMQ_RS16265	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
EMQ_RS16270	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
EMQ_RS16290	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
EMQ_RS16305	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
EMQ_RS16315	COG1414	Transcriptional regulator
EMQ_RS16335	COG1032	radical SAM domain protein
EMQ_RS16350	COG1621	beta-fructofuranosidase activity
EMQ_RS16355	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
EMQ_RS16375	COG2217	Heavy metal translocating P-type atpase
EMQ_RS16390	COG1297	OPT oligopeptide transporter protein
EMQ_RS16395	COG1511	domain protein
EMQ_RS16395	COG3264	Mechanosensitive ion channel
EMQ_RS16400	COG1028	Short-chain dehydrogenase reductase Sdr
EMQ_RS16405	COG0612	Peptidase, M16
EMQ_RS16415	COG1116	anion transmembrane transporter activity
EMQ_RS16425	COG0756	dUTP diphosphatase activity
EMQ_RS16435	COG2226	methyltransferase
EMQ_RS16440	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
EMQ_RS16445	COG0268	Binds directly to 16S ribosomal RNA
EMQ_RS16470	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
EMQ_RS16505	COG2184	nucleotidyltransferase activity
EMQ_RS16600	COG1475	DNA binding
EMQ_RS16625	COG3831	ATPase activity
EMQ_RS16740	COG0431	NADPH-dependent FMN reductase
EMQ_RS16755	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
EMQ_RS16765	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
EMQ_RS16780	COG0659	secondary active sulfate transmembrane transporter activity
EMQ_RS16835	COG4397	Mu-like prophage major head subunit gpT
EMQ_RS16895	COG4115	mRNA cleavage
EMQ_RS16900	COG2161	toxin-antitoxin pair type II binding
EMQ_RS16975	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
EMQ_RS17020	COG1859	Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
EMQ_RS17030	COG3041	Addiction module toxin RelE StbE family
EMQ_RS17035	COG3077	Addiction module antitoxin, RelB DinJ family
EMQ_RS17040	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS