locus-tag class description APA01_RS00015 PF00589 Phage integrase family APA01_RS00015 PF13356 Arm DNA-binding domain APA01_RS00020 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 APA01_RS00030 PF07690 Major Facilitator Superfamily APA01_RS00040 PF03966 Trm112p-like protein APA01_RS00045 PF00004 ATPase family associated with various cellular activities (AAA) APA01_RS00045 PF05362 Lon protease (S16) C-terminal proteolytic domain APA01_RS00045 PF02190 ATP-dependent protease La (LON) substrate-binding domain APA01_RS00050 PF00085 Thioredoxin APA01_RS00055 PF17760 UvrA interaction domain APA01_RS00055 PF17755 UvrA DNA-binding domain APA01_RS00080 PF00881 Nitroreductase family APA01_RS00090 PF00583 Acetyltransferase (GNAT) family APA01_RS00095 PF02843 Phosphoribosylglycinamide synthetase, C domain APA01_RS00095 PF02844 Phosphoribosylglycinamide synthetase, N domain APA01_RS00095 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain APA01_RS00100 PF13742 OB-fold nucleic acid binding domain APA01_RS00100 PF02601 Exonuclease VII, large subunit APA01_RS00115 PF00266 Aminotransferase class-V APA01_RS00120 PF00171 Aldehyde dehydrogenase family APA01_RS00125 PF00107 Zinc-binding dehydrogenase APA01_RS00125 PF08240 Alcohol dehydrogenase GroES-like domain APA01_RS00130 PF02233 NAD(P) transhydrogenase beta subunit APA01_RS00135 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch APA01_RS00140 PF01262 Alanine dehydrogenase/PNT, C-terminal domain APA01_RS00140 PF05222 Alanine dehydrogenase/PNT, N-terminal domain APA01_RS00145 PF02774 Semialdehyde dehydrogenase, dimerisation domain APA01_RS00145 PF01118 Semialdehyde dehydrogenase, NAD binding domain APA01_RS00150 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit APA01_RS00155 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit APA01_RS00160 PF02910 Fumarate reductase flavoprotein C-term APA01_RS00160 PF00890 FAD binding domain APA01_RS00165 PF13085 2Fe-2S iron-sulfur cluster binding domain APA01_RS00180 PF00892 EamA-like transporter family APA01_RS00185 PF00162 Phosphoglycerate kinase APA01_RS00190 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain APA01_RS00190 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain APA01_RS00195 PF02779 Transketolase, pyrimidine binding domain APA01_RS00195 PF00456 Transketolase, thiamine diphosphate binding domain APA01_RS00195 PF02780 Transketolase, C-terminal domain APA01_RS00205 PF00155 Aminotransferase class I and II APA01_RS00210 PF13462 Thioredoxin APA01_RS00220 PF00154 recA bacterial DNA recombination protein APA01_RS00230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APA01_RS00230 PF03459 TOBE domain APA01_RS00235 PF04349 Periplasmic glucan biosynthesis protein, MdoG APA01_RS00240 PF13632 Glycosyl transferase family group 2 APA01_RS00245 PF01979 Amidohydrolase family APA01_RS00250 PF07690 Major Facilitator Superfamily APA01_RS00260 PF12169 DNA polymerase III subunits gamma and tau domain III APA01_RS00260 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding APA01_RS00260 PF12170 DNA polymerase III tau subunit V interacting with alpha APA01_RS00265 PF02575 YbaB/EbfC DNA-binding family APA01_RS00270 PF13662 Toprim domain APA01_RS00270 PF02132 RecR protein APA01_RS00280 PF02152 Dihydroneopterin aldolase APA01_RS00290 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) APA01_RS00295 PF02224 Cytidylate kinase APA01_RS00300 PF00575 S1 RNA binding domain APA01_RS00315 PF01725 Ham1 family APA01_RS00320 PF01138 3' exoribonuclease family, domain 1 APA01_RS00320 PF03725 3' exoribonuclease family, domain 2 APA01_RS00325 PF01628 HrcA protein C terminal domain APA01_RS00330 PF00912 Transglycosylase APA01_RS00330 PF17092 Penicillin-binding protein OB-like domain APA01_RS00330 PF00905 Penicillin binding protein transpeptidase domain APA01_RS00335 PF03462 PCRF domain APA01_RS00335 PF00472 RF-1 domain APA01_RS00345 PF01618 MotA/TolQ/ExbB proton channel family APA01_RS00350 PF02472 Biopolymer transport protein ExbD/TolR APA01_RS00355 PF02472 Biopolymer transport protein ExbD/TolR APA01_RS00365 PF01098 Cell cycle protein APA01_RS00370 PF00905 Penicillin binding protein transpeptidase domain APA01_RS00370 PF03717 Penicillin-binding Protein dimerisation domain APA01_RS00390 PF00682 HMGL-like APA01_RS00390 PF08502 LeuA allosteric (dimerisation) domain APA01_RS00395 PF02628 Cytochrome oxidase assembly protein APA01_RS00405 PF07690 Major Facilitator Superfamily APA01_RS00410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APA01_RS00410 PF00512 His Kinase A (phospho-acceptor) domain APA01_RS00410 PF08448 PAS fold APA01_RS00410 PF13188 PAS domain APA01_RS00410 PF00072 Response regulator receiver domain APA01_RS00415 PF00156 Phosphoribosyl transferase domain APA01_RS00420 PF04632 Fusaric acid resistance protein family APA01_RS00425 PF05161 MOFRL family APA01_RS00425 PF13660 Domain of unknown function (DUF4147) APA01_RS00430 PF03167 Uracil DNA glycosylase superfamily APA01_RS00435 PF00034 Cytochrome c APA01_RS00435 PF13442 Cytochrome C oxidase, cbb3-type, subunit III APA01_RS00440 PF13360 PQQ-like domain APA01_RS00440 PF13442 Cytochrome C oxidase, cbb3-type, subunit III APA01_RS00450 PF01027 Inhibitor of apoptosis-promoting Bax1 APA01_RS00460 PF00116 Cytochrome C oxidase subunit II, periplasmic domain APA01_RS00460 PF06481 COX Aromatic Rich Motif APA01_RS00465 PF00115 Cytochrome C and Quinol oxidase polypeptide I APA01_RS00470 PF00510 Cytochrome c oxidase subunit III APA01_RS00475 PF03626 Prokaryotic Cytochrome C oxidase subunit IV APA01_RS00485 PF00037 4Fe-4S binding domain APA01_RS00485 PF11953 Domain of unknown function (DUF3470) APA01_RS00495 PF02789 Cytosol aminopeptidase family, N-terminal domain APA01_RS00495 PF00883 Cytosol aminopeptidase family, catalytic domain APA01_RS00510 PF00953 Glycosyl transferase family 4 APA01_RS00515 PF02719 Polysaccharide biosynthesis protein APA01_RS00520 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family APA01_RS00530 PF01979 Amidohydrolase family APA01_RS00535 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APA01_RS00535 PF07992 Pyridine nucleotide-disulphide oxidoreductase APA01_RS00540 PF00970 Oxidoreductase FAD-binding domain APA01_RS00540 PF00175 Oxidoreductase NAD-binding domain APA01_RS00555 PF09335 SNARE associated Golgi protein APA01_RS00560 PF00326 Prolyl oligopeptidase family APA01_RS00565 PF00390 Malic enzyme, N-terminal domain APA01_RS00565 PF03949 Malic enzyme, NAD binding domain APA01_RS00570 PF02357 Transcription termination factor nusG APA01_RS00570 PF00467 KOW motif APA01_RS00595 PF00213 ATP synthase delta (OSCP) subunit APA01_RS00600 PF02874 ATP synthase alpha/beta family, beta-barrel domain APA01_RS00600 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain APA01_RS00600 PF00306 ATP synthase alpha/beta chain, C terminal domain APA01_RS00605 PF00231 ATP synthase APA01_RS00610 PF02874 ATP synthase alpha/beta family, beta-barrel domain APA01_RS00610 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain APA01_RS00615 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain APA01_RS00620 PF14489 QueF-like protein APA01_RS00625 PF00570 HRDC domain APA01_RS00625 PF01612 3'-5' exonuclease APA01_RS00630 PF00294 pfkB family carbohydrate kinase APA01_RS00645 PF00324 Amino acid permease APA01_RS00650 PF00005 ABC transporter APA01_RS00650 PF17850 CysA C-terminal regulatory domain APA01_RS00650 PF12857 TOBE-like domain APA01_RS00655 PF00528 Binding-protein-dependent transport system inner membrane component APA01_RS00660 PF00528 Binding-protein-dependent transport system inner membrane component APA01_RS00690 PF12833 Helix-turn-helix domain APA01_RS00690 PF02311 AraC-like ligand binding domain APA01_RS00695 PF06751 Ethanolamine ammonia lyase large subunit (EutB) APA01_RS00700 PF05985 Ethanolamine ammonia-lyase light chain (EutC) APA01_RS00710 PF00529 HlyD membrane-fusion protein of T1SS APA01_RS00710 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APA01_RS00715 PF00873 AcrB/AcrD/AcrF family APA01_RS00720 PF02321 Outer membrane efflux protein APA01_RS00725 PF00313 'Cold-shock' DNA-binding domain APA01_RS00735 PF01609 Transposase DDE domain APA01_RS00755 PF00593 TonB dependent receptor APA01_RS00755 PF07715 TonB-dependent Receptor Plug Domain APA01_RS00755 PF07660 Secretin and TonB N terminus short domain APA01_RS00765 PF01075 Glycosyltransferase family 9 (heptosyltransferase) APA01_RS00780 PF00795 Carbon-nitrogen hydrolase APA01_RS00785 PF00072 Response regulator receiver domain APA01_RS00785 PF00486 Transcriptional regulatory protein, C terminal APA01_RS00790 PF00072 Response regulator receiver domain APA01_RS00790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APA01_RS00790 PF00512 His Kinase A (phospho-acceptor) domain APA01_RS00790 PF09308 LuxQ, periplasmic APA01_RS00810 PF00005 ABC transporter APA01_RS00810 PF12399 Branched-chain amino acid ATP-binding cassette transporter APA01_RS00815 PF00005 ABC transporter APA01_RS00875 PF00069 Protein kinase domain APA01_RS00875 PF03793 PASTA domain APA01_RS00880 PF03793 PASTA domain APA01_RS00880 PF00069 Protein kinase domain APA01_RS00890 PF03050 Transposase IS66 family APA01_RS00890 PF13005 zinc-finger binding domain of transposase IS66 APA01_RS00890 PF13007 Transposase C of IS166 homeodomain APA01_RS00890 PF13817 IS66 C-terminal element APA01_RS00900 PF01527 Transposase APA01_RS00920 PF03692 Putative zinc- or iron-chelating domain APA01_RS00935 PF00005 ABC transporter APA01_RS00935 PF08402 TOBE domain APA01_RS00960 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APA01_RS00960 PF00529 HlyD membrane-fusion protein of T1SS APA01_RS00965 PF02321 Outer membrane efflux protein APA01_RS00980 PF13249 Squalene-hopene cyclase N-terminal domain APA01_RS00980 PF13243 Squalene-hopene cyclase C-terminal domain APA01_RS00985 PF01593 Flavin containing amine oxidoreductase APA01_RS01005 PF01370 NAD dependent epimerase/dehydratase family APA01_RS01015 PF02153 Prephenate dehydrogenase APA01_RS01030 PF03466 LysR substrate binding domain APA01_RS01030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APA01_RS01035 PF00578 AhpC/TSA family APA01_RS01040 PF02627 Carboxymuconolactone decarboxylase family APA01_RS01055 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase APA01_RS01060 PF00719 Inorganic pyrophosphatase APA01_RS01070 PF00005 ABC transporter APA01_RS01070 PF12848 ABC transporter APA01_RS01075 PF13302 Acetyltransferase (GNAT) domain APA01_RS01090 PF00226 DnaJ domain APA01_RS01090 PF05099 Tellurite resistance protein TerB APA01_RS01100 PF08331 Domain of unknown function (DUF1730) APA01_RS01105 PF01702 Queuine tRNA-ribosyltransferase APA01_RS01110 PF02547 Queuosine biosynthesis protein APA01_RS01120 PF01161 Phosphatidylethanolamine-binding protein APA01_RS01135 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain APA01_RS01135 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain APA01_RS01150 PF02867 Ribonucleotide reductase, barrel domain APA01_RS01150 PF08471 Class II vitamin B12-dependent ribonucleotide reductase APA01_RS01175 PF02358 Trehalose-phosphatase APA01_RS01180 PF00982 Glycosyltransferase family 20 APA01_RS01185 PF02600 Disulfide bond formation protein DsbB APA01_RS01200 PF00248 Aldo/keto reductase family APA01_RS01210 PF00271 Helicase conserved C-terminal domain APA01_RS01210 PF04851 Type III restriction enzyme, res subunit APA01_RS01210 PF02151 UvrB/uvrC motif APA01_RS01210 PF17757 UvrB interaction domain APA01_RS01210 PF12344 Ultra-violet resistance protein B APA01_RS01220 PF05193 Peptidase M16 inactive domain APA01_RS01220 PF00675 Insulinase (Peptidase family M16) APA01_RS01250 PF00324 Amino acid permease APA01_RS01255 PF00817 impB/mucB/samB family APA01_RS01255 PF11799 impB/mucB/samB family C-terminal domain APA01_RS01270 PF01180 Dihydroorotate dehydrogenase APA01_RS01285 PF13277 YmdB-like protein APA01_RS01290 PF01812 5-formyltetrahydrofolate cyclo-ligase family APA01_RS01310 PF01791 DeoC/LacD family aldolase APA01_RS01315 PF02581 Thiamine monophosphate synthase APA01_RS01360 PF01609 Transposase DDE domain APA01_RS01385 PF00152 tRNA synthetases class II (D, K and N) APA01_RS01390 PF12544 Lysine-2,3-aminomutase APA01_RS01390 PF04055 Radical SAM superfamily APA01_RS01400 PF00557 Metallopeptidase family M24 APA01_RS01405 PF00768 D-alanyl-D-alanine carboxypeptidase APA01_RS01405 PF07943 Penicillin-binding protein 5, C-terminal domain APA01_RS01410 PF02617 ATP-dependent Clp protease adaptor protein ClpS APA01_RS01415 PF07724 AAA domain (Cdc48 subfamily) APA01_RS01415 PF02861 Clp amino terminal domain, pathogenicity island component APA01_RS01415 PF00004 ATPase family associated with various cellular activities (AAA) APA01_RS01415 PF10431 C-terminal, D2-small domain, of ClpB protein APA01_RS01415 PF17871 AAA lid domain APA01_RS01425 PF03976 Polyphosphate kinase 2 (PPK2) APA01_RS01430 PF02622 Uncharacterized ACR, COG1678 APA01_RS01435 PF03668 P-loop ATPase protein family APA01_RS01445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APA01_RS01445 PF13755 Sensor N-terminal transmembrane domain APA01_RS01445 PF00512 His Kinase A (phospho-acceptor) domain APA01_RS01445 PF13756 Stimulus-sensing domain APA01_RS01445 PF00672 HAMP domain APA01_RS01450 PF00072 Response regulator receiver domain APA01_RS01450 PF00486 Transcriptional regulatory protein, C terminal APA01_RS01455 PF01025 GrpE APA01_RS01460 PF00012 Hsp70 protein APA01_RS01465 PF00684 DnaJ central domain APA01_RS01465 PF00226 DnaJ domain APA01_RS01465 PF01556 DnaJ C terminal domain APA01_RS01470 PF01113 Dihydrodipicolinate reductase, N-terminus APA01_RS01470 PF05173 Dihydrodipicolinate reductase, C-terminus APA01_RS01475 PF02773 S-adenosylmethionine synthetase, C-terminal domain APA01_RS01475 PF02772 S-adenosylmethionine synthetase, central domain APA01_RS01475 PF00438 S-adenosylmethionine synthetase, N-terminal domain APA01_RS01480 PF02390 Putative methyltransferase APA01_RS01485 PF01808 AICARFT/IMPCHase bienzyme APA01_RS01485 PF02142 MGS-like domain APA01_RS01500 PF00892 EamA-like transporter family APA01_RS01510 PF02092 Glycyl-tRNA synthetase beta subunit APA01_RS01510 PF05746 DALR anticodon binding domain APA01_RS01515 PF02091 Glycyl-tRNA synthetase alpha subunit APA01_RS01525 PF01381 Helix-turn-helix APA01_RS01530 PF00795 Carbon-nitrogen hydrolase APA01_RS01540 PF01475 Ferric uptake regulator family APA01_RS01550 PF07497 Rho termination factor, RNA-binding domain APA01_RS01550 PF07498 Rho termination factor, N-terminal domain APA01_RS01550 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain APA01_RS01560 PF01544 CorA-like Mg2+ transporter protein APA01_RS01570 PF00291 Pyridoxal-phosphate dependent enzyme APA01_RS01575 PF00290 Tryptophan synthase alpha chain APA01_RS01580 PF03358 NADPH-dependent FMN reductase APA01_RS01580 PF04205 FMN-binding domain APA01_RS01580 PF00890 FAD binding domain APA01_RS01590 PF13393 Histidyl-tRNA synthetase APA01_RS01595 PF00709 Adenylosuccinate synthetase APA01_RS01600 PF00072 Response regulator receiver domain APA01_RS01600 PF00486 Transcriptional regulatory protein, C terminal APA01_RS01605 PF11808 Phosphate regulon sensor protein PhoR APA01_RS01605 PF00512 His Kinase A (phospho-acceptor) domain APA01_RS01605 PF00989 PAS fold APA01_RS01605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APA01_RS01610 PF12849 PBP superfamily domain APA01_RS01630 PF00328 Histidine phosphatase superfamily (branch 2) APA01_RS01635 PF00571 CBS domain APA01_RS01635 PF01595 Cyclin M transmembrane N-terminal domain APA01_RS01635 PF03471 Transporter associated domain APA01_RS01640 PF08240 Alcohol dehydrogenase GroES-like domain APA01_RS01640 PF00107 Zinc-binding dehydrogenase APA01_RS01645 PF03412 Peptidase C39 family APA01_RS01645 PF00005 ABC transporter APA01_RS01645 PF00664 ABC transporter transmembrane region APA01_RS01670 PF01118 Semialdehyde dehydrogenase, NAD binding domain APA01_RS01675 PF03819 MazG nucleotide pyrophosphohydrolase domain APA01_RS01685 PF00183 Hsp90 protein APA01_RS01775 PF01757 Acyltransferase family APA01_RS01800 PF09856 Predicted transcriptional regulator (DUF2083) APA01_RS01800 PF01381 Helix-turn-helix APA01_RS01800 PF06114 IrrE N-terminal-like domain APA01_RS01805 PF03972 MmgE/PrpD family APA01_RS01810 PF00285 Citrate synthase, C-terminal domain APA01_RS01820 PF16177 Acetyl-coenzyme A synthetase N-terminus APA01_RS01820 PF13193 AMP-binding enzyme C-terminal domain APA01_RS01820 PF00501 AMP-binding enzyme APA01_RS01825 PF07690 Major Facilitator Superfamily APA01_RS01840 PF02073 Thermophilic metalloprotease (M29) APA01_RS01855 PF00152 tRNA synthetases class II (D, K and N) APA01_RS01855 PF01336 OB-fold nucleic acid binding domain APA01_RS01855 PF02938 GAD domain APA01_RS01860 PF01212 Beta-eliminating lyase APA01_RS01865 PF01386 Ribosomal L25p family APA01_RS01865 PF14693 Ribosomal protein TL5, C-terminal domain APA01_RS01870 PF01195 Peptidyl-tRNA hydrolase APA01_RS01875 PF06071 Protein of unknown function (DUF933) APA01_RS01875 PF01926 50S ribosome-binding GTPase APA01_RS01880 PF00171 Aldehyde dehydrogenase family APA01_RS01885 PF01467 Cytidylyltransferase-like APA01_RS01895 PF02590 Predicted SPOUT methyltransferase APA01_RS01905 PF03466 LysR substrate binding domain APA01_RS01905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APA01_RS01910 PF03306 Alpha-acetolactate decarboxylase APA01_RS01915 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APA01_RS01915 PF00205 Thiamine pyrophosphate enzyme, central domain APA01_RS01915 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APA01_RS01925 PF00205 Thiamine pyrophosphate enzyme, central domain APA01_RS01925 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APA01_RS01925 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APA01_RS01930 PF02754 Cysteine-rich domain APA01_RS01935 PF13183 4Fe-4S dicluster domain APA01_RS01935 PF11870 Domain of unknown function (DUF3390) APA01_RS01935 PF02589 LUD domain APA01_RS01945 PF13536 Putative multidrug resistance efflux transporter APA01_RS01950 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) APA01_RS01955 PF00692 dUTPase APA01_RS01970 PF04794 YdjC-like protein APA01_RS01990 PF02780 Transketolase, C-terminal domain APA01_RS01990 PF02779 Transketolase, pyrimidine binding domain APA01_RS01990 PF13292 1-deoxy-D-xylulose-5-phosphate synthase APA01_RS02000 PF06463 Molybdenum Cofactor Synthesis C APA01_RS02000 PF04055 Radical SAM superfamily APA01_RS02005 PF03471 Transporter associated domain APA01_RS02005 PF00571 CBS domain APA01_RS02005 PF01595 Cyclin M transmembrane N-terminal domain APA01_RS02010 PF01464 Transglycosylase SLT domain APA01_RS02015 PF03167 Uracil DNA glycosylase superfamily APA01_RS02025 PF00288 GHMP kinases N terminal domain APA01_RS02025 PF08544 GHMP kinases C terminal APA01_RS02040 PF00106 short chain dehydrogenase APA01_RS02055 PF01554 MatE APA01_RS02060 PF00005 ABC transporter APA01_RS02070 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase APA01_RS02070 PF14572 Phosphoribosyl synthetase-associated domain APA01_RS02115 PF03466 LysR substrate binding domain APA01_RS02115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APA01_RS02120 PF00999 Sodium/hydrogen exchanger family APA01_RS02130 PF07715 TonB-dependent Receptor Plug Domain APA01_RS02130 PF00593 TonB dependent receptor APA01_RS02140 PF01032 FecCD transport family APA01_RS02145 PF00005 ABC transporter APA01_RS02150 PF02838 Glycosyl hydrolase family 20, domain 2 APA01_RS02150 PF07691 PA14 domain APA01_RS02150 PF00728 Glycosyl hydrolase family 20, catalytic domain APA01_RS02155 PF01869 BadF/BadG/BcrA/BcrD ATPase family APA01_RS02160 PF13580 SIS domain APA01_RS02170 PF01075 Glycosyltransferase family 9 (heptosyltransferase) APA01_RS02180 PF01609 Transposase DDE domain APA01_RS02210 PF01641 SelR domain APA01_RS02225 PF00155 Aminotransferase class I and II APA01_RS02240 PF13340 Putative transposase of IS4/5 family (DUF4096) APA01_RS02255 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus APA01_RS02255 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus APA01_RS02275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APA01_RS02275 PF03466 LysR substrate binding domain APA01_RS02285 PF07291 Methylamine utilisation protein MauE APA01_RS02290 PF00578 AhpC/TSA family APA01_RS02295 PF02975 Methylamine dehydrogenase, L chain APA01_RS02310 PF00578 AhpC/TSA family APA01_RS02320 PF00248 Aldo/keto reductase family APA01_RS02325 PF03466 LysR substrate binding domain APA01_RS02325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APA01_RS02330 PF00171 Aldehyde dehydrogenase family APA01_RS02335 PF13442 Cytochrome C oxidase, cbb3-type, subunit III APA01_RS02335 PF00034 Cytochrome c APA01_RS02340 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase APA01_RS02345 PF01799 [2Fe-2S] binding domain APA01_RS02345 PF00111 2Fe-2S iron-sulfur cluster binding domain APA01_RS02400 PF02325 YGGT family APA01_RS02485 PF00593 TonB dependent receptor APA01_RS02485 PF07715 TonB-dependent Receptor Plug Domain APA01_RS02575 PF00239 Resolvase, N terminal domain APA01_RS02575 PF02796 Helix-turn-helix domain of resolvase APA01_RS02595 PF01757 Acyltransferase family APA01_RS02620 PF00581 Rhodanese-like domain APA01_RS02620 PF17773 UPF0176 acylphosphatase like domain APA01_RS02745 PF00999 Sodium/hydrogen exchanger family APA01_RS02775 PF00551 Formyl transferase APA01_RS02780 PF04343 Protein of unknown function, DUF488 APA01_RS02785 PF02082 Transcriptional regulator APA01_RS02790 PF00106 short chain dehydrogenase APA01_RS02795 PF02537 CrcB-like protein, Camphor Resistance (CrcB) APA01_RS02810 PF03061 Thioesterase superfamily APA01_RS02830 PF01431 Peptidase family M13 APA01_RS02830 PF05649 Peptidase family M13 APA01_RS02840 PF17938 Tetracyclin repressor-like, C-terminal domain APA01_RS02840 PF00440 Bacterial regulatory proteins, tetR family APA01_RS02845 PF01144 Coenzyme A transferase APA01_RS02870 PF01144 Coenzyme A transferase APA01_RS02875 PF13660 Domain of unknown function (DUF4147) APA01_RS02875 PF05161 MOFRL family APA01_RS02880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain APA01_RS02880 PF02770 Acyl-CoA dehydrogenase, middle domain APA01_RS02880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain APA01_RS02900 PF01012 Electron transfer flavoprotein domain APA01_RS02905 PF01609 Transposase DDE domain APA01_RS02930 PF00766 Electron transfer flavoprotein FAD-binding domain APA01_RS02930 PF01012 Electron transfer flavoprotein domain APA01_RS02935 PF00171 Aldehyde dehydrogenase family APA01_RS02940 PF00732 GMC oxidoreductase APA01_RS02940 PF05199 GMC oxidoreductase APA01_RS02945 PF07690 Major Facilitator Superfamily APA01_RS02955 PF04966 Carbohydrate-selective porin, OprB family APA01_RS02985 PF03976 Polyphosphate kinase 2 (PPK2) APA01_RS02990 PF01384 Phosphate transporter family APA01_RS03000 PF00676 Dehydrogenase E1 component APA01_RS03005 PF02779 Transketolase, pyrimidine binding domain APA01_RS03005 PF02780 Transketolase, C-terminal domain APA01_RS03010 PF00364 Biotin-requiring enzyme APA01_RS03010 PF00561 alpha/beta hydrolase fold APA01_RS03015 PF00011 Hsp20/alpha crystallin family APA01_RS03030 PF07992 Pyridine nucleotide-disulphide oxidoreductase APA01_RS03040 PF07683 Cobalamin synthesis protein cobW C-terminal domain APA01_RS03040 PF02492 CobW/HypB/UreG, nucleotide-binding domain APA01_RS03045 PF00654 Voltage gated chloride channel APA01_RS03050 PF01545 Cation efflux family APA01_RS03050 PF16916 Dimerisation domain of Zinc Transporter APA01_RS03055 PF01545 Cation efflux family APA01_RS03065 PF00561 alpha/beta hydrolase fold APA01_RS03080 PF03169 OPT oligopeptide transporter protein APA01_RS03110 PF00899 ThiF family APA01_RS03120 PF00224 Pyruvate kinase, barrel domain APA01_RS03120 PF02887 Pyruvate kinase, alpha/beta domain APA01_RS03140 PF00679 Elongation factor G C-terminus APA01_RS03140 PF03144 Elongation factor Tu domain 2 APA01_RS03140 PF00009 Elongation factor Tu GTP binding domain APA01_RS03155 PF01266 FAD dependent oxidoreductase APA01_RS03160 PF07992 Pyridine nucleotide-disulphide oxidoreductase APA01_RS03165 PF00180 Isocitrate/isopropylmalate dehydrogenase APA01_RS03185 PF00155 Aminotransferase class I and II APA01_RS03190 PF00543 Nitrogen regulatory protein P-II APA01_RS03195 PF03951 Glutamine synthetase, beta-Grasp domain APA01_RS03195 PF00120 Glutamine synthetase, catalytic domain APA01_RS03205 PF01011 PQQ enzyme repeat APA01_RS03220 PF06421 GTP-binding protein LepA C-terminus APA01_RS03220 PF00679 Elongation factor G C-terminus APA01_RS03220 PF03144 Elongation factor Tu domain 2 APA01_RS03220 PF00009 Elongation factor Tu GTP binding domain APA01_RS03225 PF00561 alpha/beta hydrolase fold APA01_RS03230 PF07021 Methionine biosynthesis protein MetW APA01_RS03230 PF00561 alpha/beta hydrolase fold APA01_RS03235 PF00271 Helicase conserved C-terminal domain APA01_RS03235 PF00270 DEAD/DEAH box helicase APA01_RS03245 PF00484 Carbonic anhydrase APA01_RS03255 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) APA01_RS03260 PF01192 RNA polymerase Rpb6 APA01_RS03265 PF13291 ACT domain APA01_RS03265 PF04607 Region found in RelA / SpoT proteins APA01_RS03265 PF02824 TGS domain APA01_RS03270 PF01648 4'-phosphopantetheinyl transferase superfamily APA01_RS03275 PF10502 Signal peptidase, peptidase S26 APA01_RS03280 PF00035 Double-stranded RNA binding motif APA01_RS03280 PF14622 Ribonuclease-III-like APA01_RS03285 PF01926 50S ribosome-binding GTPase APA01_RS03285 PF07650 KH domain APA01_RS03290 PF00696 Amino acid kinase family APA01_RS03295 PF01765 Ribosome recycling factor APA01_RS03300 PF01255 Putative undecaprenyl diphosphate synthase APA01_RS03310 PF13288 DXP reductoisomerase C-terminal domain APA01_RS03310 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase APA01_RS03310 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain APA01_RS03315 PF02163 Peptidase family M50 APA01_RS03315 PF17820 PDZ domain APA01_RS03320 PF07244 Surface antigen variable number repeat APA01_RS03320 PF01103 Surface antigen APA01_RS03330 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD APA01_RS03330 PF00132 Bacterial transferase hexapeptide (six repeats) APA01_RS03335 PF07977 FabA-like domain APA01_RS03340 PF00132 Bacterial transferase hexapeptide (six repeats) APA01_RS03340 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 APA01_RS03345 PF17930 LpxI N-terminal domain APA01_RS03345 PF06230 LpxI C-terminal domain APA01_RS03350 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily APA01_RS03360 PF00468 Ribosomal protein L34 APA01_RS03365 PF00825 Ribonuclease P APA01_RS03370 PF02096 60Kd inner membrane protein APA01_RS03370 PF14849 YidC periplasmic domain APA01_RS03375 PF01926 50S ribosome-binding GTPase APA01_RS03380 PF00696 Amino acid kinase family APA01_RS03385 PF14602 Hexapeptide repeat of succinyl-transferase APA01_RS03385 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal APA01_RS03385 PF00132 Bacterial transferase hexapeptide (six repeats) APA01_RS03390 PF07687 Peptidase dimerisation domain APA01_RS03390 PF01546 Peptidase family M20/M25/M40 APA01_RS03400 PF01416 tRNA pseudouridine synthase APA01_RS03405 PF00551 Formyl transferase APA01_RS03405 PF02911 Formyl transferase, C-terminal domain APA01_RS03410 PF01327 Polypeptide deformylase APA01_RS03415 PF00011 Hsp20/alpha crystallin family APA01_RS03425 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein APA01_RS03425 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus APA01_RS03435 PF03476 MOSC N-terminal beta barrel domain APA01_RS03435 PF03473 MOSC domain APA01_RS03435 PF00111 2Fe-2S iron-sulfur cluster binding domain APA01_RS03440 PF00005 ABC transporter APA01_RS03455 PF00571 CBS domain APA01_RS03455 PF01380 SIS domain APA01_RS03460 PF01612 3'-5' exonuclease APA01_RS03460 PF00570 HRDC domain APA01_RS03465 PF08032 RNA 2'-O ribose methyltransferase substrate binding APA01_RS03465 PF00588 SpoU rRNA Methylase family APA01_RS03475 PF00561 alpha/beta hydrolase fold APA01_RS03475 PF00106 short chain dehydrogenase APA01_RS03480 PF00625 Guanylate kinase APA01_RS03485 PF00294 pfkB family carbohydrate kinase APA01_RS03485 PF01467 Cytidylyltransferase-like APA01_RS03495 PF03796 DnaB-like helicase C terminal domain APA01_RS03495 PF00772 DnaB-like helicase N terminal domain APA01_RS03505 PF12794 Mechanosensitive ion channel inner membrane domain 1 APA01_RS03505 PF00924 Mechanosensitive ion channel APA01_RS03505 PF12795 Mechanosensitive ion channel porin domain APA01_RS03510 PF00005 ABC transporter APA01_RS03515 PF02405 Permease MlaE APA01_RS03525 PF06745 KaiC APA01_RS03525 PF18073 Rubredoxin metal binding domain APA01_RS03550 PF00324 Amino acid permease APA01_RS03560 PF14850 DNA-binding domain of Proline dehydrogenase APA01_RS03560 PF18327 Proline utilization A proline dehydrogenase N-terminal domain APA01_RS03560 PF00171 Aldehyde dehydrogenase family APA01_RS03560 PF01619 Proline dehydrogenase APA01_RS03575 PF13193 AMP-binding enzyme C-terminal domain APA01_RS03575 PF16177 Acetyl-coenzyme A synthetase N-terminus APA01_RS03575 PF00501 AMP-binding enzyme APA01_RS03605 PF01923 Cobalamin adenosyltransferase APA01_RS03620 PF01565 FAD binding domain APA01_RS03620 PF02913 FAD linked oxidases, C-terminal domain APA01_RS03630 PF01300 Telomere recombination APA01_RS03630 PF03481 Putative GTP-binding controlling metal-binding APA01_RS03635 PF00459 Inositol monophosphatase family APA01_RS03640 PF02789 Cytosol aminopeptidase family, N-terminal domain APA01_RS03640 PF00883 Cytosol aminopeptidase family, catalytic domain APA01_RS03650 PF00248 Aldo/keto reductase family APA01_RS03655 PF13180 PDZ domain APA01_RS03660 PF00271 Helicase conserved C-terminal domain APA01_RS03660 PF04408 Helicase associated domain (HA2) APA01_RS03660 PF00270 DEAD/DEAH box helicase APA01_RS03660 PF08482 ATP-dependent helicase C-terminal APA01_RS03670 PF01430 Hsp33 protein APA01_RS03680 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain APA01_RS03680 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain APA01_RS03685 PF00202 Aminotransferase class-III APA01_RS03700 PF02416 mttA/Hcf106 family APA01_RS03705 PF00596 Class II Aldolase and Adducin N-terminal domain APA01_RS03710 PF03079 ARD/ARD' family APA01_RS03720 PF06574 FAD synthetase APA01_RS03720 PF01687 Riboflavin kinase APA01_RS03725 PF06827 Zinc finger found in FPG and IleRS APA01_RS03725 PF00133 tRNA synthetases class I (I, L, M and V) APA01_RS03725 PF08264 Anticodon-binding domain of tRNA APA01_RS03730 PF01252 Signal peptidase (SPase) II APA01_RS03740 PF01119 DNA mismatch repair protein, C-terminal domain APA01_RS03740 PF08676 MutL C terminal dimerisation domain APA01_RS03745 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus APA01_RS03745 PF00361 Proton-conducting membrane transporter APA01_RS03750 PF00892 EamA-like transporter family APA01_RS03755 PF01751 Toprim domain APA01_RS03755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APA01_RS03755 PF00204 DNA gyrase B APA01_RS03755 PF00986 DNA gyrase B subunit, carboxyl terminus APA01_RS03770 PF02082 Transcriptional regulator APA01_RS03775 PF00291 Pyridoxal-phosphate dependent enzyme APA01_RS03780 PF00691 OmpA family APA01_RS03790 PF03572 Peptidase family S41 APA01_RS03790 PF13180 PDZ domain APA01_RS03795 PF00575 S1 RNA binding domain APA01_RS03795 PF08461 Ribonuclease R winged-helix domain APA01_RS03795 PF08206 Ribonuclease B OB domain APA01_RS03795 PF17876 Cold shock domain APA01_RS03795 PF00773 RNB domain APA01_RS03800 PF01751 Toprim domain APA01_RS03800 PF01396 Topoisomerase DNA binding C4 zinc finger APA01_RS03800 PF13368 Topoisomerase C-terminal repeat APA01_RS03800 PF01131 DNA topoisomerase APA01_RS03805 PF17782 DprA winged helix domain APA01_RS03805 PF02481 DNA recombination-mediator protein A APA01_RS03825 PF02481 DNA recombination-mediator protein A APA01_RS03825 PF18255 DNA processing protein A sterile alpha motif domain APA01_RS03830 PF02660 Glycerol-3-phosphate acyltransferase APA01_RS03835 PF01979 Amidohydrolase family APA01_RS03840 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain APA01_RS03840 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain APA01_RS03845 PF00749 tRNA synthetases class I (E and Q), catalytic domain APA01_RS03850 PF00753 Metallo-beta-lactamase superfamily APA01_RS03850 PF13567 Domain of unknown function (DUF4131) APA01_RS03850 PF03772 Competence protein APA01_RS03855 PF02627 Carboxymuconolactone decarboxylase family APA01_RS03860 PF03969 AFG1-like ATPase APA01_RS03865 PF00676 Dehydrogenase E1 component APA01_RS03865 PF16078 2-oxoglutarate dehydrogenase N-terminus APA01_RS03865 PF02779 Transketolase, pyrimidine binding domain APA01_RS03865 PF16870 2-oxoglutarate dehydrogenase C-terminal APA01_RS03870 PF00364 Biotin-requiring enzyme APA01_RS03870 PF02817 e3 binding domain APA01_RS03870 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) APA01_RS03875 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APA01_RS03875 PF07992 Pyridine nucleotide-disulphide oxidoreductase APA01_RS03890 PF05221 S-adenosyl-L-homocysteine hydrolase APA01_RS03890 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain APA01_RS03905 PF16123 Hydroxyacylglutathione hydrolase C-terminus APA01_RS03905 PF00753 Metallo-beta-lactamase superfamily APA01_RS03935 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit APA01_RS03940 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit APA01_RS03945 PF01066 CDP-alcohol phosphatidyltransferase APA01_RS03950 PF02666 Phosphatidylserine decarboxylase APA01_RS03955 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain APA01_RS03955 PF01411 tRNA synthetases class II (A) APA01_RS03955 PF02272 DHHA1 domain APA01_RS03965 PF00691 OmpA family APA01_RS03970 PF01761 3-dehydroquinate synthase APA01_RS03980 PF00589 Phage integrase family APA01_RS03980 PF02899 Phage integrase, N-terminal SAM-like domain APA01_RS03985 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit APA01_RS03990 PF18146 Damage-inducible protein CinA KH domain APA01_RS03990 PF02464 Competence-damaged protein APA01_RS03990 PF00994 Probable molybdopterin binding domain APA01_RS03995 PF01921 tRNA synthetases class I (K) APA01_RS04010 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ APA01_RS04015 PF00814 Glycoprotease family APA01_RS04020 PF03900 Porphobilinogen deaminase, C-terminal domain APA01_RS04020 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain APA01_RS04030 PF02556 Preprotein translocase subunit SecB APA01_RS04035 PF00934 PE family APA01_RS04035 PF00300 Histidine phosphatase superfamily (branch 1) APA01_RS04045 PF01555 DNA methylase APA01_RS04050 PF03150 Di-haem cytochrome c peroxidase APA01_RS04050 PF00034 Cytochrome c APA01_RS04055 PF00488 MutS domain V APA01_RS04055 PF01713 Smr domain APA01_RS04065 PF01218 Coproporphyrinogen III oxidase APA01_RS04070 PF00032 Cytochrome b(C-terminal)/b6/petD APA01_RS04070 PF02167 Cytochrome C1 family APA01_RS04070 PF00033 Cytochrome b/b6/petB APA01_RS04075 PF00033 Cytochrome b/b6/petB APA01_RS04075 PF02167 Cytochrome C1 family APA01_RS04075 PF00032 Cytochrome b(C-terminal)/b6/petD APA01_RS04080 PF01048 Phosphorylase superfamily APA01_RS04100 PF00881 Nitroreductase family APA01_RS04105 PF02423 Ornithine cyclodeaminase/mu-crystallin family APA01_RS04110 PF00171 Aldehyde dehydrogenase family APA01_RS04120 PF01527 Transposase APA01_RS04125 PF13276 HTH-like domain APA01_RS04125 PF00665 Integrase core domain APA01_RS04125 PF13333 Integrase core domain APA01_RS04160 PF00239 Resolvase, N terminal domain APA01_RS04175 PF00589 Phage integrase family APA01_RS04175 PF02899 Phage integrase, N-terminal SAM-like domain APA01_RS04180 PF13356 Arm DNA-binding domain APA01_RS04180 PF00589 Phage integrase family APA01_RS04240 PF01527 Transposase APA01_RS04250 PF03050 Transposase IS66 family APA01_RS04250 PF13817 IS66 C-terminal element APA01_RS04250 PF13005 zinc-finger binding domain of transposase IS66 APA01_RS04250 PF13007 Transposase C of IS166 homeodomain APA01_RS04255 PF00665 Integrase core domain APA01_RS04255 PF13333 Integrase core domain APA01_RS04255 PF13276 HTH-like domain APA01_RS04260 PF01527 Transposase APA01_RS04345 PF02548 Ketopantoate hydroxymethyltransferase APA01_RS04350 PF00724 NADH:flavin oxidoreductase / NADH oxidase family APA01_RS04355 PF01022 Bacterial regulatory protein, arsR family APA01_RS04360 PF08240 Alcohol dehydrogenase GroES-like domain APA01_RS04365 PF00089 Trypsin APA01_RS04370 PF16363 GDP-mannose 4,6 dehydratase APA01_RS04380 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain APA01_RS04380 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain APA01_RS04385 PF00206 Lyase APA01_RS04385 PF14698 Argininosuccinate lyase C-terminal APA01_RS04400 PF18317 Shikimate 5'-dehydrogenase C-terminal domain APA01_RS04400 PF08501 Shikimate dehydrogenase substrate binding domain APA01_RS04400 PF01488 Shikimate / quinate 5-dehydrogenase APA01_RS04405 PF01121 Dephospho-CoA kinase APA01_RS04410 PF00929 Exonuclease APA01_RS04420 PF13579 Glycosyl transferase 4-like domain APA01_RS04420 PF00534 Glycosyl transferases group 1 APA01_RS04430 PF00834 Ribulose-phosphate 3 epimerase family APA01_RS04435 PF01189 16S rRNA methyltransferase RsmB/F APA01_RS04435 PF01029 NusB family APA01_RS04440 PF00551 Formyl transferase APA01_RS04445 PF00586 AIR synthase related protein, N-terminal domain APA01_RS04445 PF02769 AIR synthase related protein, C-terminal domain APA01_RS04455 PF13089 Polyphosphate kinase N-terminal domain APA01_RS04455 PF17941 Polyphosphate kinase C-terminal domain 1 APA01_RS04455 PF02503 Polyphosphate kinase middle domain APA01_RS04455 PF13090 Polyphosphate kinase C-terminal domain 2 APA01_RS04460 PF02541 Ppx/GppA phosphatase family APA01_RS04475 PF00005 ABC transporter APA01_RS04495 PF07885 Ion channel APA01_RS04495 PF17655 Inward rectifier potassium channel C-terminal domain APA01_RS04500 PF04632 Fusaric acid resistance protein family APA01_RS04505 PF04632 Fusaric acid resistance protein family APA01_RS04525 PF03918 Cytochrome C biogenesis protein APA01_RS04530 PF08534 Redoxin APA01_RS04535 PF01578 Cytochrome C assembly protein APA01_RS04535 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal APA01_RS04540 PF03100 CcmE APA01_RS04545 PF01578 Cytochrome C assembly protein APA01_RS04575 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain APA01_RS04575 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APA01_RS04580 PF03588 Leucyl/phenylalanyl-tRNA protein transferase APA01_RS04605 PF03710 Glutamate-ammonia ligase adenylyltransferase APA01_RS04605 PF08335 GlnD PII-uridylyltransferase APA01_RS04610 PF00578 AhpC/TSA family APA01_RS04620 PF00083 Sugar (and other) transporter APA01_RS04630 PF02646 RmuC family APA01_RS04635 PF00486 Transcriptional regulatory protein, C terminal APA01_RS04635 PF00072 Response regulator receiver domain APA01_RS04640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APA01_RS04640 PF00512 His Kinase A (phospho-acceptor) domain APA01_RS04645 PF00873 AcrB/AcrD/AcrF family APA01_RS04650 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APA01_RS04655 PF02321 Outer membrane efflux protein APA01_RS04660 PF00298 Ribosomal protein L11, RNA binding domain APA01_RS04660 PF03946 Ribosomal protein L11, N-terminal domain APA01_RS04665 PF00687 Ribosomal protein L1p/L10e family APA01_RS04670 PF00466 Ribosomal protein L10 APA01_RS04675 PF00542 Ribosomal protein L7/L12 C-terminal domain APA01_RS04675 PF16320 Ribosomal protein L7/L12 dimerisation domain APA01_RS04680 PF00562 RNA polymerase Rpb2, domain 6 APA01_RS04680 PF10385 RNA polymerase beta subunit external 1 domain APA01_RS04680 PF04563 RNA polymerase beta subunit APA01_RS04680 PF04561 RNA polymerase Rpb2, domain 2 APA01_RS04680 PF04565 RNA polymerase Rpb2, domain 3 APA01_RS04680 PF04560 RNA polymerase Rpb2, domain 7 APA01_RS04685 PF05000 RNA polymerase Rpb1, domain 4 APA01_RS04685 PF04983 RNA polymerase Rpb1, domain 3 APA01_RS04685 PF00623 RNA polymerase Rpb1, domain 2 APA01_RS04685 PF04997 RNA polymerase Rpb1, domain 1 APA01_RS04685 PF04998 RNA polymerase Rpb1, domain 5 APA01_RS04690 PF00164 Ribosomal protein S12/S23 APA01_RS04695 PF00177 Ribosomal protein S7p/S5e APA01_RS04700 PF03143 Elongation factor Tu C-terminal domain APA01_RS04700 PF00009 Elongation factor Tu GTP binding domain APA01_RS04700 PF03144 Elongation factor Tu domain 2 APA01_RS04705 PF00338 Ribosomal protein S10p/S20e APA01_RS04710 PF00297 Ribosomal protein L3 APA01_RS04715 PF00573 Ribosomal protein L4/L1 family APA01_RS04720 PF00276 Ribosomal protein L23 APA01_RS04725 PF03947 Ribosomal Proteins L2, C-terminal domain APA01_RS04725 PF00181 Ribosomal Proteins L2, RNA binding domain APA01_RS04730 PF00203 Ribosomal protein S19 APA01_RS04735 PF00237 Ribosomal protein L22p/L17e APA01_RS04740 PF07650 KH domain APA01_RS04740 PF00189 Ribosomal protein S3, C-terminal domain APA01_RS04745 PF00252 Ribosomal protein L16p/L10e APA01_RS04750 PF00831 Ribosomal L29 protein APA01_RS04755 PF00366 Ribosomal protein S17 APA01_RS04760 PF00238 Ribosomal protein L14p/L23e APA01_RS04765 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 APA01_RS04770 PF00673 ribosomal L5P family C-terminus APA01_RS04770 PF00281 Ribosomal protein L5 APA01_RS04775 PF00253 Ribosomal protein S14p/S29e APA01_RS04780 PF00410 Ribosomal protein S8 APA01_RS04785 PF00347 Ribosomal protein L6 APA01_RS04790 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast APA01_RS04795 PF00333 Ribosomal protein S5, N-terminal domain APA01_RS04795 PF03719 Ribosomal protein S5, C-terminal domain APA01_RS04800 PF00327 Ribosomal protein L30p/L7e APA01_RS04805 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A APA01_RS04810 PF00344 SecY translocase APA01_RS04815 PF05191 Adenylate kinase, active site lid APA01_RS04820 PF00416 Ribosomal protein S13/S18 APA01_RS04825 PF00411 Ribosomal protein S11 APA01_RS04830 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain APA01_RS04830 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain APA01_RS04830 PF01000 RNA polymerase Rpb3/RpoA insert domain APA01_RS04835 PF01196 Ribosomal protein L17 APA01_RS04845 PF00528 Binding-protein-dependent transport system inner membrane component APA01_RS04850 PF00005 ABC transporter APA01_RS04865 PF02321 Outer membrane efflux protein APA01_RS04870 PF00873 AcrB/AcrD/AcrF family APA01_RS04875 PF00873 AcrB/AcrD/AcrF family APA01_RS04880 PF13533 Biotin-lipoyl like APA01_RS04885 PF07690 Major Facilitator Superfamily APA01_RS04890 PF05532 CsbD-like APA01_RS04895 PF01351 Ribonuclease HII APA01_RS04900 PF18755 Restriction Enzyme Adenine Methylase Associated APA01_RS04900 PF01555 DNA methylase APA01_RS04925 PF17863 AAA lid domain APA01_RS04925 PF07726 ATPase family associated with various cellular activities (AAA) APA01_RS04935 PF13735 tRNA nucleotidyltransferase domain 2 putative APA01_RS04935 PF01743 Poly A polymerase head domain APA01_RS04935 PF12627 Probable RNA and SrmB- binding site of polymerase A APA01_RS04940 PF00664 ABC transporter transmembrane region APA01_RS04940 PF00005 ABC transporter APA01_RS04945 PF13533 Biotin-lipoyl like APA01_RS04950 PF07690 Major Facilitator Superfamily APA01_RS04955 PF00293 NUDIX domain APA01_RS04965 PF13180 PDZ domain APA01_RS04965 PF03572 Peptidase family S41 APA01_RS04975 PF01676 Metalloenzyme superfamily APA01_RS04975 PF06415 BPG-independent PGAM N-terminus (iPGM_N) APA01_RS04980 PF13291 ACT domain APA01_RS04980 PF00291 Pyridoxal-phosphate dependent enzyme APA01_RS04985 PF01272 Transcription elongation factor, GreA/GreB, C-term APA01_RS04985 PF03449 Transcription elongation factor, N-terminal APA01_RS04990 PF02142 MGS-like domain APA01_RS04990 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain APA01_RS04990 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain APA01_RS04995 PF00117 Glutamine amidotransferase class-I APA01_RS04995 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain APA01_RS05005 PF01807 CHC2 zinc finger APA01_RS05005 PF08275 DNA primase catalytic core, N-terminal domain APA01_RS05005 PF10410 DnaB-helicase binding domain of primase APA01_RS05005 PF08278 DNA primase DnaG DnaB-binding APA01_RS05005 PF13662 Toprim domain APA01_RS05010 PF00140 Sigma-70 factor, region 1.2 APA01_RS05010 PF03979 Sigma-70 factor, region 1.1 APA01_RS05010 PF04546 Sigma-70, non-essential region APA01_RS05010 PF04539 Sigma-70 region 3 APA01_RS05010 PF04545 Sigma-70, region 4 APA01_RS05010 PF04542 Sigma-70 region 2 APA01_RS05020 PF01250 Ribosomal protein S6 APA01_RS05025 PF01084 Ribosomal protein S18 APA01_RS05030 PF01281 Ribosomal protein L9, N-terminal domain APA01_RS05030 PF03948 Ribosomal protein L9, C-terminal domain APA01_RS05040 PF00398 Ribosomal RNA adenine dimethylase APA01_RS05045 PF09312 SurA N-terminal domain APA01_RS05045 PF00639 PPIC-type PPIASE domain APA01_RS05050 PF04453 LPS transport system D APA01_RS05070 PF00664 ABC transporter transmembrane region APA01_RS05070 PF00005 ABC transporter APA01_RS05075 PF07729 FCD domain APA01_RS05075 PF00392 Bacterial regulatory proteins, gntR family APA01_RS05080 PF03776 Septum formation topological specificity factor MinE APA01_RS05085 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain APA01_RS05090 PF05209 Septum formation inhibitor MinC, N-terminal domain APA01_RS05090 PF03775 Septum formation inhibitor MinC, C-terminal domain APA01_RS05095 PF00043 Glutathione S-transferase, C-terminal domain APA01_RS05095 PF13417 Glutathione S-transferase, N-terminal domain APA01_RS05105 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APA01_RS05120 PF02559 CarD-like/TRCF domain APA01_RS05125 PF01062 Bestrophin, RFP-TM, chloride channel APA01_RS05130 PF00756 Putative esterase APA01_RS05145 PF00005 ABC transporter APA01_RS05160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APA01_RS05160 PF13188 PAS domain APA01_RS05160 PF00072 Response regulator receiver domain APA01_RS05160 PF00512 His Kinase A (phospho-acceptor) domain APA01_RS05160 PF08448 PAS fold APA01_RS05165 PF00072 Response regulator receiver domain APA01_RS05165 PF13188 PAS domain APA01_RS05165 PF08448 PAS fold APA01_RS05165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APA01_RS05165 PF00512 His Kinase A (phospho-acceptor) domain APA01_RS05170 PF00227 Proteasome subunit APA01_RS05175 PF00004 ATPase family associated with various cellular activities (AAA) APA01_RS05175 PF07724 AAA domain (Cdc48 subfamily) APA01_RS05175 PF10431 C-terminal, D2-small domain, of ClpB protein APA01_RS05180 PF02657 Fe-S metabolism associated domain APA01_RS05185 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase APA01_RS05190 PF01799 [2Fe-2S] binding domain APA01_RS05190 PF00111 2Fe-2S iron-sulfur cluster binding domain APA01_RS05195 PF13442 Cytochrome C oxidase, cbb3-type, subunit III APA01_RS05195 PF00034 Cytochrome c APA01_RS05195 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase APA01_RS05200 PF01232 Mannitol dehydrogenase Rossmann domain APA01_RS05200 PF08125 Mannitol dehydrogenase C-terminal domain APA01_RS05205 PF01632 Ribosomal protein L35 APA01_RS05210 PF00453 Ribosomal protein L20 APA01_RS05215 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain APA01_RS05215 PF01409 tRNA synthetases class II core domain (F) APA01_RS05220 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain APA01_RS05220 PF03483 B3/4 domain APA01_RS05220 PF03484 tRNA synthetase B5 domain APA01_RS05220 PF03147 Ferredoxin-fold anticodon binding domain APA01_RS05220 PF01588 Putative tRNA binding domain APA01_RS05225 PF12849 PBP superfamily domain APA01_RS05230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APA01_RS05240 PF00999 Sodium/hydrogen exchanger family APA01_RS05250 PF00163 Ribosomal protein S4/S9 N-terminal domain APA01_RS05250 PF01479 S4 domain APA01_RS05255 PF00009 Elongation factor Tu GTP binding domain APA01_RS05255 PF03144 Elongation factor Tu domain 2 APA01_RS05255 PF16658 Class II release factor RF3, C-terminal domain APA01_RS05265 PF00180 Isocitrate/isopropylmalate dehydrogenase APA01_RS05265 PF18324 Hypothetical protein TT1725 APA01_RS05270 PF00557 Metallopeptidase family M24 APA01_RS05270 PF01321 Creatinase/Prolidase N-terminal domain APA01_RS05280 PF00580 UvrD/REP helicase N-terminal domain APA01_RS05280 PF13361 UvrD-like helicase C-terminal domain APA01_RS05285 PF04002 RadC-like JAB domain APA01_RS05290 PF04002 RadC-like JAB domain APA01_RS05295 PF02222 ATP-grasp domain APA01_RS05295 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain APA01_RS05300 PF00731 AIR carboxylase APA01_RS05320 PF00011 Hsp20/alpha crystallin family APA01_RS05325 PF01197 Ribosomal protein L31 APA01_RS05330 PF01741 Large-conductance mechanosensitive channel, MscL APA01_RS05340 PF07549 SecD/SecF GG Motif APA01_RS05340 PF02355 Protein export membrane protein APA01_RS05345 PF02355 Protein export membrane protein APA01_RS05345 PF07549 SecD/SecF GG Motif APA01_RS05355 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APA01_RS05355 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APA01_RS05360 PF03477 ATP cone domain APA01_RS05360 PF00317 Ribonucleotide reductase, all-alpha domain APA01_RS05360 PF02867 Ribonucleotide reductase, barrel domain APA01_RS05365 PF00268 Ribonucleotide reductase, small chain APA01_RS05375 PF00348 Polyprenyl synthetase APA01_RS05380 PF01177 Asp/Glu/Hydantoin racemase APA01_RS05385 PF00156 Phosphoribosyl transferase domain APA01_RS05395 PF00285 Citrate synthase, C-terminal domain APA01_RS05405 PF02153 Prephenate dehydrogenase APA01_RS05405 PF01817 Chorismate mutase type II APA01_RS05415 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain APA01_RS05415 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain APA01_RS05425 PF02463 RecF/RecN/SMC N terminal domain APA01_RS05430 PF13462 Thioredoxin APA01_RS05435 PF00571 CBS domain APA01_RS05435 PF03471 Transporter associated domain APA01_RS05440 PF02130 Uncharacterized protein family UPF0054 APA01_RS05445 PF02562 PhoH-like protein APA01_RS05450 PF01938 TRAM domain APA01_RS05450 PF04055 Radical SAM superfamily APA01_RS05450 PF00919 Uncharacterized protein family UPF0004 APA01_RS05460 PF01103 Surface antigen APA01_RS05460 PF07244 Surface antigen variable number repeat APA01_RS05460 PF17243 POTRA domain TamA domain 1 APA01_RS05475 PF01244 Membrane dipeptidase (Peptidase family M19) APA01_RS05480 PF01541 GIY-YIG catalytic domain APA01_RS05480 PF12826 Helix-hairpin-helix motif APA01_RS05480 PF02151 UvrB/uvrC motif APA01_RS05480 PF08459 UvrC Helix-hairpin-helix N-terminal APA01_RS05485 PF01066 CDP-alcohol phosphatidyltransferase APA01_RS05495 PF02597 ThiS family APA01_RS05500 PF02391 MoaE protein APA01_RS05505 PF00202 Aminotransferase class-III APA01_RS05510 PF00155 Aminotransferase class I and II APA01_RS05520 PF13649 Methyltransferase domain APA01_RS05525 PF01726 LexA DNA binding domain APA01_RS05525 PF00717 Peptidase S24-like APA01_RS05530 PF03453 MoeA N-terminal region (domain I and II) APA01_RS05530 PF03454 MoeA C-terminal region (domain IV) APA01_RS05530 PF00994 Probable molybdopterin binding domain APA01_RS05535 PF00471 Ribosomal protein L33 APA01_RS05545 PF03952 Enolase, N-terminal domain APA01_RS05545 PF00113 Enolase, C-terminal TIM barrel domain APA01_RS05555 PF01266 FAD dependent oxidoreductase APA01_RS05565 PF05690 Thiazole biosynthesis protein ThiG APA01_RS05570 PF02581 Thiamine monophosphate synthase APA01_RS05575 PF00270 DEAD/DEAH box helicase APA01_RS05575 PF00271 Helicase conserved C-terminal domain APA01_RS05575 PF17191 RecG wedge domain APA01_RS05580 PF03937 Flavinator of succinate dehydrogenase APA01_RS05585 PF02559 CarD-like/TRCF domain APA01_RS05585 PF00270 DEAD/DEAH box helicase APA01_RS05585 PF00271 Helicase conserved C-terminal domain APA01_RS05585 PF03461 TRCF domain APA01_RS05585 PF17757 UvrB interaction domain APA01_RS05600 PF13593 SBF-like CPA transporter family (DUF4137) APA01_RS05605 PF00282 Pyridoxal-dependent decarboxylase conserved domain APA01_RS05610 PF11775 Cobalamin biosynthesis protein CobT VWA domain APA01_RS05610 PF06213 Cobalamin biosynthesis protein CobT APA01_RS05615 PF08406 CbbQ/NirQ/NorQ C-terminal APA01_RS05615 PF12556 Cobaltochelatase CobS subunit N terminal APA01_RS05615 PF07728 AAA domain (dynein-related subfamily) APA01_RS05620 PF00684 DnaJ central domain APA01_RS05620 PF00226 DnaJ domain APA01_RS05620 PF01556 DnaJ C terminal domain APA01_RS05625 PF01722 BolA-like protein APA01_RS05635 PF03099 Biotin/lipoate A/B protein ligase family APA01_RS05645 PF00483 Nucleotidyl transferase APA01_RS05650 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I APA01_RS05650 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain APA01_RS05650 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II APA01_RS05650 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III APA01_RS05655 PF06463 Molybdenum Cofactor Synthesis C APA01_RS05655 PF04055 Radical SAM superfamily APA01_RS05660 PF08241 Methyltransferase domain APA01_RS05665 PF00156 Phosphoribosyl transferase domain APA01_RS05670 PF00462 Glutaredoxin APA01_RS05685 PF10282 Lactonase, 7-bladed beta-propeller APA01_RS05695 PF01842 ACT domain APA01_RS05695 PF00696 Amino acid kinase family APA01_RS05695 PF13840 ACT domain APA01_RS05700 PF03060 Nitronate monooxygenase APA01_RS05710 PF04551 GcpE protein APA01_RS05715 PF13393 Histidyl-tRNA synthetase APA01_RS05715 PF03129 Anticodon binding domain APA01_RS05720 PF00472 RF-1 domain APA01_RS05720 PF03462 PCRF domain APA01_RS05730 PF13847 Methyltransferase domain APA01_RS05730 PF17827 PrmC N-terminal domain APA01_RS05750 PF02673 Bacitracin resistance protein BacA APA01_RS05755 PF13520 Amino acid permease APA01_RS05770 PF13406 Transglycosylase SLT domain APA01_RS05775 PF03330 Lytic transglycolase APA01_RS05775 PF05036 Sporulation related domain APA01_RS05780 PF07943 Penicillin-binding protein 5, C-terminal domain APA01_RS05780 PF00768 D-alanyl-D-alanine carboxypeptidase APA01_RS05785 PF02223 Thymidylate kinase APA01_RS05795 PF09334 tRNA synthetases class I (M) APA01_RS05795 PF08264 Anticodon-binding domain of tRNA APA01_RS05800 PF01026 TatD related DNase APA01_RS05815 PF01243 Pyridoxamine 5'-phosphate oxidase APA01_RS05815 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region APA01_RS05825 PF01264 Chorismate synthase APA01_RS05830 PF02566 OsmC-like protein APA01_RS05835 PF06039 Malate:quinone oxidoreductase (Mqo) APA01_RS05845 PF06508 Queuosine biosynthesis protein QueC APA01_RS05855 PF06968 Biotin and Thiamin Synthesis associated domain APA01_RS05855 PF04055 Radical SAM superfamily APA01_RS05865 PF01507 Phosphoadenosine phosphosulfate reductase family APA01_RS05870 PF01507 Phosphoadenosine phosphosulfate reductase family APA01_RS05875 PF00009 Elongation factor Tu GTP binding domain APA01_RS05885 PF01077 Nitrite and sulphite reductase 4Fe-4S domain APA01_RS05885 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain APA01_RS05895 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) APA01_RS05900 PF02606 Tetraacyldisaccharide-1-P 4'-kinase APA01_RS05910 PF00459 Inositol monophosphatase family APA01_RS05920 PF02618 YceG-like family APA01_RS05925 PF00109 Beta-ketoacyl synthase, N-terminal domain APA01_RS05925 PF02801 Beta-ketoacyl synthase, C-terminal domain APA01_RS05930 PF00550 Phosphopantetheine attachment site APA01_RS05940 PF00698 Acyl transferase domain APA01_RS05965 PF00239 Resolvase, N terminal domain APA01_RS05965 PF02796 Helix-turn-helix domain of resolvase APA01_RS05970 PF00665 Integrase core domain APA01_RS05970 PF09299 Mu transposase, C-terminal APA01_RS05985 PF00313 'Cold-shock' DNA-binding domain APA01_RS05990 PF01668 SmpB protein APA01_RS05995 PF00701 Dihydrodipicolinate synthetase family APA01_RS06000 PF00800 Prephenate dehydratase APA01_RS06000 PF01842 ACT domain APA01_RS06000 PF01817 Chorismate mutase type II APA01_RS06005 PF02348 Cytidylyltransferase APA01_RS06010 PF00034 Cytochrome c APA01_RS06015 PF00459 Inositol monophosphatase family APA01_RS06020 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APA01_RS06020 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain APA01_RS06025 PF13335 Magnesium chelatase, subunit ChlI C-terminal APA01_RS06025 PF01078 Magnesium chelatase, subunit ChlI APA01_RS06030 PF01053 Cys/Met metabolism PLP-dependent enzyme APA01_RS06035 PF00581 Rhodanese-like domain APA01_RS06040 PF01594 AI-2E family transporter APA01_RS06050 PF13396 Phospholipase_D-nuclease N-terminal APA01_RS06050 PF13091 PLD-like domain APA01_RS06055 PF02021 Uncharacterised protein family UPF0102 APA01_RS06065 PF00462 Glutaredoxin APA01_RS06070 PF01722 BolA-like protein APA01_RS06075 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain APA01_RS06075 PF02769 AIR synthase related protein, C-terminal domain APA01_RS06075 PF00586 AIR synthase related protein, N-terminal domain APA01_RS06090 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase APA01_RS06095 PF01259 SAICAR synthetase APA01_RS06100 PF00206 Lyase APA01_RS06100 PF10397 Adenylosuccinate lyase C-terminus APA01_RS06105 PF03741 Integral membrane protein TerC family APA01_RS06110 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain APA01_RS06110 PF01464 Transglycosylase SLT domain APA01_RS06120 PF02464 Competence-damaged protein APA01_RS06135 PF04055 Radical SAM superfamily APA01_RS06140 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APA01_RS06140 PF07992 Pyridine nucleotide-disulphide oxidoreductase APA01_RS06145 PF02817 e3 binding domain APA01_RS06145 PF00364 Biotin-requiring enzyme APA01_RS06145 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) APA01_RS06150 PF02780 Transketolase, C-terminal domain APA01_RS06150 PF00364 Biotin-requiring enzyme APA01_RS06150 PF02779 Transketolase, pyrimidine binding domain APA01_RS06155 PF00676 Dehydrogenase E1 component APA01_RS06160 PF01967 MoaC family APA01_RS06165 PF00218 Indole-3-glycerol phosphate synthase APA01_RS06170 PF02885 Glycosyl transferase family, helical bundle domain APA01_RS06170 PF00591 Glycosyl transferase family, a/b domain APA01_RS06175 PF00117 Glutamine amidotransferase class-I APA01_RS06180 PF04715 Anthranilate synthase component I, N terminal region APA01_RS06180 PF00425 chorismate binding enzyme APA01_RS06190 PF00121 Triosephosphate isomerase APA01_RS06200 PF06418 CTP synthase N-terminus APA01_RS06200 PF00117 Glutamine amidotransferase class-I APA01_RS06205 PF00793 DAHP synthetase I family APA01_RS06210 PF00204 DNA gyrase B APA01_RS06210 PF01751 Toprim domain APA01_RS06210 PF00986 DNA gyrase B subunit, carboxyl terminus APA01_RS06210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APA01_RS06215 PF02463 RecF/RecN/SMC N terminal domain APA01_RS06220 PF00712 DNA polymerase III beta subunit, N-terminal domain APA01_RS06220 PF02767 DNA polymerase III beta subunit, central domain APA01_RS06220 PF02768 DNA polymerase III beta subunit, C-terminal domain APA01_RS06225 PF00308 Bacterial dnaA protein APA01_RS06225 PF11638 DnaA N-terminal domain APA01_RS06225 PF08299 Bacterial dnaA protein helix-turn-helix APA01_RS06230 PF01649 Ribosomal protein S20 APA01_RS06235 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain APA01_RS06235 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain APA01_RS06235 PF06827 Zinc finger found in FPG and IleRS APA01_RS06240 PF01209 ubiE/COQ5 methyltransferase family APA01_RS06245 PF04127 DNA / pantothenate metabolism flavoprotein APA01_RS06245 PF02441 Flavoprotein APA01_RS06250 PF00692 dUTPase APA01_RS06255 PF00528 Binding-protein-dependent transport system inner membrane component APA01_RS06260 PF00005 ABC transporter APA01_RS06265 PF01625 Peptide methionine sulfoxide reductase APA01_RS06270 PF10458 Valyl tRNA synthetase tRNA binding arm APA01_RS06270 PF08264 Anticodon-binding domain of tRNA APA01_RS06270 PF00133 tRNA synthetases class I (I, L, M and V) APA01_RS06280 PF02321 Outer membrane efflux protein APA01_RS06320 PF00586 AIR synthase related protein, N-terminal domain APA01_RS06320 PF02769 AIR synthase related protein, C-terminal domain APA01_RS06325 PF01029 NusB family APA01_RS06330 PF03477 ATP cone domain APA01_RS06340 PF02782 FGGY family of carbohydrate kinases, C-terminal domain APA01_RS06340 PF00370 FGGY family of carbohydrate kinases, N-terminal domain APA01_RS06345 PF00230 Major intrinsic protein APA01_RS06350 PF01266 FAD dependent oxidoreductase APA01_RS06350 PF16901 C-terminal domain of alpha-glycerophosphate oxidase APA01_RS06355 PF00455 DeoR C terminal sensor domain APA01_RS06355 PF08220 DeoR-like helix-turn-helix domain APA01_RS06360 PF09382 RQC domain APA01_RS06360 PF16124 RecQ zinc-binding APA01_RS06360 PF00570 HRDC domain APA01_RS06360 PF00271 Helicase conserved C-terminal domain APA01_RS06360 PF00270 DEAD/DEAH box helicase APA01_RS06370 PF00664 ABC transporter transmembrane region APA01_RS06370 PF00005 ABC transporter APA01_RS06375 PF00664 ABC transporter transmembrane region APA01_RS06375 PF00005 ABC transporter APA01_RS06380 PF07568 Histidine kinase APA01_RS06380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APA01_RS06380 PF12282 Signal transduction histidine kinase APA01_RS06390 PF04542 Sigma-70 region 2 APA01_RS06390 PF08281 Sigma-70, region 4 APA01_RS06395 PF08281 Sigma-70, region 4 APA01_RS06395 PF04542 Sigma-70 region 2 APA01_RS06400 PF00072 Response regulator receiver domain APA01_RS06405 PF16326 ABC transporter C-terminal domain APA01_RS06405 PF00005 ABC transporter APA01_RS06410 PF01204 Trehalase APA01_RS06415 PF00107 Zinc-binding dehydrogenase APA01_RS06415 PF08240 Alcohol dehydrogenase GroES-like domain APA01_RS06420 PF03831 PhnA domain APA01_RS06420 PF08274 PhnA Zinc-Ribbon APA01_RS06435 PF02567 Phenazine biosynthesis-like protein APA01_RS06440 PF01979 Amidohydrolase family APA01_RS06455 PF00005 ABC transporter APA01_RS06470 PF01979 Amidohydrolase family APA01_RS06480 PF07687 Peptidase dimerisation domain APA01_RS06480 PF01546 Peptidase family M20/M25/M40 APA01_RS06485 PF00266 Aminotransferase class-V APA01_RS06500 PF01425 Amidase APA01_RS06510 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase APA01_RS06510 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain APA01_RS06515 PF01799 [2Fe-2S] binding domain APA01_RS06515 PF00111 2Fe-2S iron-sulfur cluster binding domain APA01_RS06520 PF00860 Permease family APA01_RS06525 PF00576 HIUase/Transthyretin family APA01_RS06540 PF13454 FAD-NAD(P)-binding APA01_RS06550 PF01979 Amidohydrolase family APA01_RS06560 PF02472 Biopolymer transport protein ExbD/TolR APA01_RS06565 PF02472 Biopolymer transport protein ExbD/TolR APA01_RS06570 PF01618 MotA/TolQ/ExbB proton channel family APA01_RS06585 PF13533 Biotin-lipoyl like APA01_RS06590 PF00005 ABC transporter APA01_RS06605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APA01_RS06605 PF03466 LysR substrate binding domain APA01_RS06610 PF03601 Conserved hypothetical protein 698 APA01_RS06620 PF13249 Squalene-hopene cyclase N-terminal domain APA01_RS06620 PF13243 Squalene-hopene cyclase C-terminal domain APA01_RS06625 PF17754 MftR C-terminal domain APA01_RS06625 PF00440 Bacterial regulatory proteins, tetR family APA01_RS06640 PF06965 Na+/H+ antiporter 1 APA01_RS06645 PF00171 Aldehyde dehydrogenase family APA01_RS06650 PF00724 NADH:flavin oxidoreductase / NADH oxidase family APA01_RS06655 PF01638 HxlR-like helix-turn-helix APA01_RS06660 PF06628 Catalase-related immune-responsive APA01_RS06660 PF00199 Catalase APA01_RS06660 PF18011 C-terminal domain found in long catalases APA01_RS06665 PF00472 RF-1 domain APA01_RS06680 PF13382 Adenine deaminase C-terminal domain APA01_RS06680 PF01979 Amidohydrolase family APA01_RS06685 PF00583 Acetyltransferase (GNAT) family APA01_RS06690 PF08543 Phosphomethylpyrimidine kinase APA01_RS06705 PF00593 TonB dependent receptor APA01_RS06705 PF07715 TonB-dependent Receptor Plug Domain APA01_RS06715 PF06472 ABC transporter transmembrane region 2 APA01_RS06715 PF00005 ABC transporter APA01_RS06730 PF00012 Hsp70 protein APA01_RS06735 PF02321 Outer membrane efflux protein APA01_RS06740 PF00873 AcrB/AcrD/AcrF family APA01_RS06770 PF07690 Major Facilitator Superfamily APA01_RS06775 PF04909 Amidohydrolase APA01_RS06800 PF04073 Aminoacyl-tRNA editing domain APA01_RS06805 PF07690 Major Facilitator Superfamily APA01_RS06820 PF02472 Biopolymer transport protein ExbD/TolR APA01_RS06825 PF01618 MotA/TolQ/ExbB proton channel family APA01_RS06840 PF13340 Putative transposase of IS4/5 family (DUF4096) APA01_RS06855 PF00593 TonB dependent receptor APA01_RS06855 PF07715 TonB-dependent Receptor Plug Domain APA01_RS06860 PF01609 Transposase DDE domain APA01_RS06865 PF07715 TonB-dependent Receptor Plug Domain APA01_RS06865 PF00593 TonB dependent receptor APA01_RS06875 PF08281 Sigma-70, region 4 APA01_RS06875 PF04542 Sigma-70 region 2 APA01_RS06875 PF12680 SnoaL-like domain APA01_RS06880 PF00593 TonB dependent receptor APA01_RS06880 PF07715 TonB-dependent Receptor Plug Domain APA01_RS06895 PF04545 Sigma-70, region 4 APA01_RS06895 PF04542 Sigma-70 region 2 APA01_RS06895 PF04539 Sigma-70 region 3 APA01_RS06900 PF09084 NMT1/THI5 like APA01_RS06905 PF00005 ABC transporter APA01_RS06910 PF00528 Binding-protein-dependent transport system inner membrane component APA01_RS06920 PF02668 Taurine catabolism dioxygenase TauD, TfdA family APA01_RS06940 PF13340 Putative transposase of IS4/5 family (DUF4096) APA01_RS06950 PF07690 Major Facilitator Superfamily APA01_RS06965 PF07690 Major Facilitator Superfamily APA01_RS06975 PF07690 Major Facilitator Superfamily APA01_RS06980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APA01_RS06980 PF03466 LysR substrate binding domain APA01_RS06985 PF00920 Dehydratase family APA01_RS06990 PF03328 HpcH/HpaI aldolase/citrate lyase family APA01_RS06995 PF01979 Amidohydrolase family APA01_RS06995 PF13382 Adenine deaminase C-terminal domain APA01_RS07005 PF01979 Amidohydrolase family APA01_RS07010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APA01_RS07015 PF00465 Iron-containing alcohol dehydrogenase APA01_RS07020 PF00083 Sugar (and other) transporter APA01_RS07025 PF00171 Aldehyde dehydrogenase family APA01_RS07035 PF00528 Binding-protein-dependent transport system inner membrane component APA01_RS07040 PF00005 ABC transporter APA01_RS07045 PF01402 Ribbon-helix-helix protein, copG family APA01_RS07045 PF08753 NikR C terminal nickel binding domain APA01_RS07055 PF09347 Domain of unknown function (DUF1989) APA01_RS07060 PF02785 Biotin carboxylase C-terminal domain APA01_RS07060 PF00364 Biotin-requiring enzyme APA01_RS07060 PF00289 Biotin carboxylase, N-terminal domain APA01_RS07060 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain APA01_RS07065 PF01425 Amidase APA01_RS07070 PF07859 alpha/beta hydrolase fold APA01_RS07075 PF13087 AAA domain APA01_RS07075 PF13195 Protein of unknown function (DUF4011) APA01_RS07075 PF13086 AAA domain APA01_RS07075 PF13087 AAA domain APA01_RS07075 PF13195 Protein of unknown function (DUF4011) APA01_RS07075 PF13086 AAA domain APA01_RS07085 PF07715 TonB-dependent Receptor Plug Domain APA01_RS07085 PF00593 TonB dependent receptor APA01_RS07095 PF00593 TonB dependent receptor APA01_RS07095 PF07715 TonB-dependent Receptor Plug Domain APA01_RS07110 PF13340 Putative transposase of IS4/5 family (DUF4096) APA01_RS07130 PF00296 Luciferase-like monooxygenase APA01_RS07140 PF01613 Flavin reductase like domain APA01_RS07155 PF00296 Luciferase-like monooxygenase APA01_RS07160 PF00296 Luciferase-like monooxygenase APA01_RS07175 PF00881 Nitroreductase family APA01_RS07210 PF11867 Domain of unknown function (DUF3387) APA01_RS07210 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) APA01_RS07210 PF18766 SWI2/SNF2 ATPase APA01_RS07220 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) APA01_RS07220 PF11867 Domain of unknown function (DUF3387) APA01_RS07220 PF18766 SWI2/SNF2 ATPase APA01_RS07240 PF05717 IS66 Orf2 like protein APA01_RS07245 PF03050 Transposase IS66 family APA01_RS07245 PF13817 IS66 C-terminal element APA01_RS07245 PF13007 Transposase C of IS166 homeodomain APA01_RS07245 PF13005 zinc-finger binding domain of transposase IS66 APA01_RS07255 PF13817 IS66 C-terminal element APA01_RS07255 PF03050 Transposase IS66 family APA01_RS07255 PF13005 zinc-finger binding domain of transposase IS66 APA01_RS07255 PF13007 Transposase C of IS166 homeodomain APA01_RS07265 PF01527 Transposase APA01_RS07300 PF17755 UvrA DNA-binding domain APA01_RS07305 PF00375 Sodium:dicarboxylate symporter family APA01_RS07310 PF05724 Thiopurine S-methyltransferase (TPMT) APA01_RS07315 PF13417 Glutathione S-transferase, N-terminal domain APA01_RS07315 PF04399 Glutaredoxin 2, C terminal domain APA01_RS07320 PF07690 Major Facilitator Superfamily APA01_RS07325 PF01888 CbiD APA01_RS07330 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APA01_RS07340 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APA01_RS07345 PF02571 Precorrin-6x reductase CbiJ/CobK APA01_RS07350 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APA01_RS07355 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APA01_RS07360 PF02570 Precorrin-8X methylmutase APA01_RS07365 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain APA01_RS07375 PF00206 Lyase APA01_RS07375 PF10415 Fumarase C C-terminus APA01_RS07385 PF02830 V4R domain APA01_RS07385 PF00158 Sigma-54 interaction domain APA01_RS07385 PF06505 Activator of aromatic catabolism APA01_RS07385 PF02954 Bacterial regulatory protein, Fis family APA01_RS07395 PF01011 PQQ enzyme repeat APA01_RS07425 PF01594 AI-2E family transporter APA01_RS07435 PF00871 Acetokinase family APA01_RS07440 PF01515 Phosphate acetyl/butaryl transferase APA01_RS07445 PF01070 FMN-dependent dehydrogenase APA01_RS07450 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APA01_RS07450 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg APA01_RS07450 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase APA01_RS07450 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II APA01_RS07450 PF10371 Domain of unknown function APA01_RS07455 PF07992 Pyridine nucleotide-disulphide oxidoreductase APA01_RS07455 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster APA01_RS07470 PF02659 Putative manganese efflux pump APA01_RS07475 PF14497 Glutathione S-transferase, C-terminal domain APA01_RS07475 PF02798 Glutathione S-transferase, N-terminal domain APA01_RS07480 PF02634 FdhD/NarQ family APA01_RS07485 PF12804 MobA-like NTP transferase domain APA01_RS07490 PF03205 Molybdopterin guanine dinucleotide synthesis protein B APA01_RS07495 PF00994 Probable molybdopterin binding domain APA01_RS07495 PF03454 MoeA C-terminal region (domain IV) APA01_RS07495 PF03453 MoeA N-terminal region (domain I and II) APA01_RS07500 PF04216 Protein involved in formate dehydrogenase formation APA01_RS07505 PF01292 Prokaryotic cytochrome b561 APA01_RS07510 PF09163 Formate dehydrogenase N, transmembrane APA01_RS07510 PF13247 4Fe-4S dicluster domain APA01_RS07515 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APA01_RS07515 PF00384 Molybdopterin oxidoreductase APA01_RS07515 PF01568 Molydopterin dinucleotide binding domain APA01_RS07525 PF02541 Ppx/GppA phosphatase family APA01_RS07530 PF01728 FtsJ-like methyltransferase APA01_RS07535 PF00480 ROK family APA01_RS07540 PF01206 Sulfurtransferase TusA APA01_RS07545 PF02609 Exonuclease VII small subunit APA01_RS07550 PF00348 Polyprenyl synthetase APA01_RS07555 PF02780 Transketolase, C-terminal domain APA01_RS07555 PF02779 Transketolase, pyrimidine binding domain APA01_RS07555 PF13292 1-deoxy-D-xylulose-5-phosphate synthase APA01_RS07560 PF01728 FtsJ-like methyltransferase APA01_RS07560 PF01479 S4 domain APA01_RS07570 PF04055 Radical SAM superfamily APA01_RS07575 PF00764 Arginosuccinate synthase APA01_RS07580 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase APA01_RS07580 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase APA01_RS07590 PF00579 tRNA synthetases class I (W and Y) APA01_RS07605 PF00486 Transcriptional regulatory protein, C terminal APA01_RS07605 PF00072 Response regulator receiver domain APA01_RS07620 PF01189 16S rRNA methyltransferase RsmB/F APA01_RS07620 PF01029 NusB family APA01_RS07625 PF00571 CBS domain APA01_RS07625 PF00478 IMP dehydrogenase / GMP reductase domain APA01_RS07630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APA01_RS07635 PF00528 Binding-protein-dependent transport system inner membrane component APA01_RS07635 PF12911 N-terminal TM domain of oligopeptide transport permease C APA01_RS07640 PF00528 Binding-protein-dependent transport system inner membrane component APA01_RS07645 PF00005 ABC transporter APA01_RS07645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APA01_RS07650 PF00005 ABC transporter APA01_RS07650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APA01_RS07655 PF03060 Nitronate monooxygenase APA01_RS07660 PF01569 PAP2 superfamily APA01_RS07675 PF04185 Phosphoesterase family APA01_RS07675 PF05506 Domain of unknown function (DUF756) APA01_RS07700 PF07690 Major Facilitator Superfamily APA01_RS07715 PF03551 Transcriptional regulator PadR-like family APA01_RS07725 PF00529 HlyD membrane-fusion protein of T1SS APA01_RS07725 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APA01_RS07730 PF04632 Fusaric acid resistance protein family APA01_RS07740 PF04055 Radical SAM superfamily APA01_RS07740 PF13282 Domain of unknown function (DUF4070) APA01_RS07740 PF02310 B12 binding domain APA01_RS07750 PF07715 TonB-dependent Receptor Plug Domain APA01_RS07750 PF00593 TonB dependent receptor APA01_RS07755 PF05552 Conserved TM helix APA01_RS07755 PF00924 Mechanosensitive ion channel APA01_RS07760 PF07995 Glucose / Sorbosone dehydrogenase APA01_RS07765 PF07995 Glucose / Sorbosone dehydrogenase APA01_RS07775 PF02322 Cytochrome bd terminal oxidase subunit II APA01_RS07780 PF01654 Cytochrome bd terminal oxidase subunit I APA01_RS07785 PF00664 ABC transporter transmembrane region APA01_RS07785 PF00005 ABC transporter APA01_RS07790 PF00664 ABC transporter transmembrane region APA01_RS07790 PF00005 ABC transporter APA01_RS07800 PF13640 2OG-Fe(II) oxygenase superfamily APA01_RS07800 PF18331 PKHD-type hydroxylase C-terminal domain APA01_RS07805 PF00593 TonB dependent receptor APA01_RS07805 PF07715 TonB-dependent Receptor Plug Domain APA01_RS07815 PF01609 Transposase DDE domain APA01_RS07825 PF17763 Glutaminase/Asparaginase C-terminal domain APA01_RS07825 PF00710 Asparaginase, N-terminal APA01_RS07830 PF00155 Aminotransferase class I and II APA01_RS07835 PF06826 Predicted Permease Membrane Region APA01_RS07835 PF02080 TrkA-C domain APA01_RS07870 PF00005 ABC transporter APA01_RS07870 PF12848 ABC transporter APA01_RS07875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APA01_RS07875 PF03466 LysR substrate binding domain APA01_RS07895 PF00593 TonB dependent receptor APA01_RS07895 PF07715 TonB-dependent Receptor Plug Domain APA01_RS07900 PF08240 Alcohol dehydrogenase GroES-like domain APA01_RS07900 PF00107 Zinc-binding dehydrogenase APA01_RS07915 PF05974 Domain of unknown function (DUF892) APA01_RS07925 PF02308 MgtC family APA01_RS07940 PF02515 CoA-transferase family III APA01_RS07950 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APA01_RS07950 PF00205 Thiamine pyrophosphate enzyme, central domain APA01_RS07950 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APA01_RS07955 PF02515 CoA-transferase family III APA01_RS07990 PF07690 Major Facilitator Superfamily APA01_RS07995 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III APA01_RS07995 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II APA01_RS07995 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I APA01_RS07995 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain APA01_RS08000 PF12464 Maltose acetyltransferase APA01_RS08000 PF14602 Hexapeptide repeat of succinyl-transferase APA01_RS08015 PF13333 Integrase core domain APA01_RS08015 PF00665 Integrase core domain APA01_RS08015 PF13276 HTH-like domain APA01_RS08020 PF01527 Transposase APA01_RS08045 PF08521 Two-component sensor kinase N-terminal APA01_RS08045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APA01_RS08045 PF00512 His Kinase A (phospho-acceptor) domain APA01_RS08050 PF00072 Response regulator receiver domain APA01_RS08050 PF00486 Transcriptional regulatory protein, C terminal APA01_RS08055 PF00873 AcrB/AcrD/AcrF family APA01_RS08120 PF00501 AMP-binding enzyme APA01_RS08130 PF00155 Aminotransferase class I and II APA01_RS08145 PF00149 Calcineurin-like phosphoesterase APA01_RS08170 PF13419 Haloacid dehalogenase-like hydrolase APA01_RS08175 PF14602 Hexapeptide repeat of succinyl-transferase APA01_RS08175 PF12804 MobA-like NTP transferase domain APA01_RS08175 PF00132 Bacterial transferase hexapeptide (six repeats) APA01_RS08180 PF01380 SIS domain APA01_RS08190 PF01609 Transposase DDE domain APA01_RS08205 PF01609 Transposase DDE domain APA01_RS08230 PF00255 Glutathione peroxidase APA01_RS08235 PF00005 ABC transporter APA01_RS08240 PF12704 MacB-like periplasmic core domain APA01_RS08240 PF02687 FtsX-like permease family APA01_RS08245 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) APA01_RS08245 PF03129 Anticodon binding domain APA01_RS08250 PF17770 Ribonuclease J C-terminal domain APA01_RS08250 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain APA01_RS08250 PF12706 Beta-lactamase superfamily domain APA01_RS08255 PF03309 Type III pantothenate kinase APA01_RS08260 PF03099 Biotin/lipoate A/B protein ligase family APA01_RS08260 PF02237 Biotin protein ligase C terminal domain APA01_RS08265 PF00361 Proton-conducting membrane transporter APA01_RS08270 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus APA01_RS08270 PF00361 Proton-conducting membrane transporter APA01_RS08275 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L APA01_RS08280 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 APA01_RS08285 PF12838 4Fe-4S dicluster domain APA01_RS08290 PF00146 NADH dehydrogenase APA01_RS08295 PF00384 Molybdopterin oxidoreductase APA01_RS08295 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region APA01_RS08295 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal APA01_RS08300 PF10531 SLBB domain APA01_RS08300 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region APA01_RS08300 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit APA01_RS08310 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit APA01_RS08315 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit APA01_RS08320 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit APA01_RS08325 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 APA01_RS08345 PF00216 Bacterial DNA-binding protein APA01_RS08350 PF02190 ATP-dependent protease La (LON) substrate-binding domain APA01_RS08350 PF00004 ATPase family associated with various cellular activities (AAA) APA01_RS08350 PF05362 Lon protease (S16) C-terminal proteolytic domain APA01_RS08355 PF10431 C-terminal, D2-small domain, of ClpB protein APA01_RS08355 PF07724 AAA domain (Cdc48 subfamily) APA01_RS08355 PF06689 ClpX C4-type zinc finger APA01_RS08360 PF00574 Clp protease APA01_RS08365 PF05697 Bacterial trigger factor protein (TF) APA01_RS08365 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase APA01_RS08365 PF05698 Bacterial trigger factor protein (TF) C-terminus APA01_RS08375 PF01256 Carbohydrate kinase APA01_RS08375 PF03853 YjeF-related protein N-terminus APA01_RS08390 PF00270 DEAD/DEAH box helicase APA01_RS08390 PF00271 Helicase conserved C-terminal domain APA01_RS08395 PF05958 tRNA (Uracil-5-)-methyltransferase APA01_RS08400 PF01521 Iron-sulphur cluster biosynthesis APA01_RS08405 PF01883 Iron-sulfur cluster assembly protein APA01_RS08415 PF00266 Aminotransferase class-V APA01_RS08420 PF01458 Uncharacterized protein family (UPF0051) APA01_RS08425 PF00005 ABC transporter APA01_RS08430 PF01458 Uncharacterized protein family (UPF0051) APA01_RS08435 PF02082 Transcriptional regulator APA01_RS08440 PF04286 Protein of unknown function (DUF445) APA01_RS08445 PF00311 Phosphoenolpyruvate carboxylase APA01_RS08455 PF03144 Elongation factor Tu domain 2 APA01_RS08455 PF14492 Elongation Factor G, domain II APA01_RS08455 PF03764 Elongation factor G, domain IV APA01_RS08455 PF00009 Elongation factor Tu GTP binding domain APA01_RS08455 PF00679 Elongation factor G C-terminus APA01_RS08460 PF00830 Ribosomal L28 family APA01_RS08470 PF00005 ABC transporter APA01_RS08470 PF00664 ABC transporter transmembrane region APA01_RS08480 PF01966 HD domain APA01_RS08480 PF08335 GlnD PII-uridylyltransferase APA01_RS08485 PF00488 MutS domain V APA01_RS08485 PF01624 MutS domain I APA01_RS08485 PF05188 MutS domain II APA01_RS08485 PF05192 MutS domain III APA01_RS08485 PF05190 MutS family domain IV APA01_RS08495 PF02074 Carboxypeptidase Taq (M32) metallopeptidase APA01_RS08505 PF14821 Threonine synthase N terminus APA01_RS08505 PF00291 Pyridoxal-phosphate dependent enzyme APA01_RS08510 PF05193 Peptidase M16 inactive domain APA01_RS08510 PF00675 Insulinase (Peptidase family M16) APA01_RS08515 PF01523 Putative modulator of DNA gyrase APA01_RS08530 PF01040 UbiA prenyltransferase family APA01_RS08535 PF00115 Cytochrome C and Quinol oxidase polypeptide I APA01_RS08540 PF01209 ubiE/COQ5 methyltransferase family APA01_RS08545 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain APA01_RS08545 PF02951 Prokaryotic glutathione synthetase, N-terminal domain APA01_RS08560 PF01037 Lrp/AsnC ligand binding domain APA01_RS08565 PF07992 Pyridine nucleotide-disulphide oxidoreductase APA01_RS08570 PF03466 LysR substrate binding domain APA01_RS08570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APA01_RS08575 PF05443 ROS/MUCR transcriptional regulator protein APA01_RS08580 PF00216 Bacterial DNA-binding protein APA01_RS08590 PF03023 Lipid II flippase MurJ APA01_RS08605 PF13411 MerR HTH family regulatory protein APA01_RS08610 PF00216 Bacterial DNA-binding protein APA01_RS08615 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal APA01_RS08615 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III APA01_RS08620 PF02504 Fatty acid synthesis protein APA01_RS08625 PF01783 Ribosomal L32p protein family APA01_RS08640 PF00672 HAMP domain APA01_RS08640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APA01_RS08640 PF00512 His Kinase A (phospho-acceptor) domain APA01_RS08645 PF00072 Response regulator receiver domain APA01_RS08645 PF00486 Transcriptional regulatory protein, C terminal APA01_RS08650 PF12802 MarR family APA01_RS08660 PF01327 Polypeptide deformylase APA01_RS08665 PF01165 Ribosomal protein S21 APA01_RS08670 PF00180 Isocitrate/isopropylmalate dehydrogenase APA01_RS08675 PF00694 Aconitase C-terminal domain APA01_RS08680 PF00330 Aconitase family (aconitate hydratase) APA01_RS08685 PF01245 Ribosomal protein L19 APA01_RS08690 PF01746 tRNA (Guanine-1)-methyltransferase APA01_RS08695 PF01782 RimM N-terminal domain APA01_RS08700 PF00886 Ribosomal protein S16 APA01_RS08705 PF00448 SRP54-type protein, GTPase domain APA01_RS08705 PF02881 SRP54-type protein, helical bundle domain APA01_RS08705 PF02978 Signal peptide binding domain APA01_RS08725 PF01479 S4 domain APA01_RS08725 PF00849 RNA pseudouridylate synthase APA01_RS08730 PF16193 AAA C-terminal domain APA01_RS08730 PF00004 ATPase family associated with various cellular activities (AAA) APA01_RS08730 PF12002 MgsA AAA+ ATPase C terminal APA01_RS08740 PF01040 UbiA prenyltransferase family APA01_RS08745 PF04452 RNA methyltransferase APA01_RS08750 PF04107 Glutamate-cysteine ligase family 2(GCS2) APA01_RS08755 PF07690 Major Facilitator Superfamily APA01_RS08760 PF01926 50S ribosome-binding GTPase APA01_RS08760 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal APA01_RS08765 PF13360 PQQ-like domain APA01_RS08785 PF13439 Glycosyltransferase Family 4 APA01_RS08785 PF00534 Glycosyl transferases group 1 APA01_RS08790 PF00733 Asparagine synthase APA01_RS08790 PF13537 Glutamine amidotransferase domain APA01_RS08800 PF01502 Phosphoribosyl-AMP cyclohydrolase APA01_RS08805 PF02684 Lipid-A-disaccharide synthetase APA01_RS08810 PF00916 Sulfate permease family APA01_RS08810 PF01740 STAS domain APA01_RS08815 PF01794 Ferric reductase like transmembrane component APA01_RS08830 PF02777 Iron/manganese superoxide dismutases, C-terminal domain APA01_RS08830 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain APA01_RS08835 PF00004 ATPase family associated with various cellular activities (AAA) APA01_RS08835 PF07724 AAA domain (Cdc48 subfamily) APA01_RS08835 PF17871 AAA lid domain APA01_RS08835 PF02861 Clp amino terminal domain, pathogenicity island component APA01_RS08835 PF10431 C-terminal, D2-small domain, of ClpB protein APA01_RS08840 PF00293 NUDIX domain APA01_RS08845 PF01926 50S ribosome-binding GTPase APA01_RS08845 PF16360 GTP-binding GTPase Middle Region APA01_RS08845 PF13167 GTP-binding GTPase N-terminal APA01_RS08850 PF17209 Hfq protein APA01_RS08855 PF02954 Bacterial regulatory protein, Fis family APA01_RS08855 PF00072 Response regulator receiver domain APA01_RS08855 PF00158 Sigma-54 interaction domain APA01_RS08860 PF00672 HAMP domain APA01_RS08860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APA01_RS08865 PF00072 Response regulator receiver domain APA01_RS08865 PF00158 Sigma-54 interaction domain APA01_RS08865 PF02954 Bacterial regulatory protein, Fis family APA01_RS08870 PF00512 His Kinase A (phospho-acceptor) domain APA01_RS08870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APA01_RS08870 PF00989 PAS fold APA01_RS08875 PF01207 Dihydrouridine synthase (Dus) APA01_RS08880 PF02542 YgbB family APA01_RS08880 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase APA01_RS08885 PF00535 Glycosyl transferase family 2 APA01_RS08900 PF03275 UDP-galactopyranose mutase APA01_RS08925 PF00156 Phosphoribosyl transferase domain APA01_RS08950 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain APA01_RS08950 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain APA01_RS08950 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain APA01_RS08960 PF00543 Nitrogen regulatory protein P-II APA01_RS08965 PF00132 Bacterial transferase hexapeptide (six repeats) APA01_RS08965 PF06426 Serine acetyltransferase, N-terminal APA01_RS08970 PF01494 FAD binding domain APA01_RS08975 PF09335 SNARE associated Golgi protein APA01_RS09010 PF13358 DDE superfamily endonuclease APA01_RS09015 PF02371 Transposase IS116/IS110/IS902 family APA01_RS09015 PF01548 Transposase APA01_RS09025 PF08207 Elongation factor P (EF-P) KOW-like domain APA01_RS09025 PF01132 Elongation factor P (EF-P) OB domain APA01_RS09025 PF09285 Elongation factor P, C-terminal APA01_RS09030 PF00459 Inositol monophosphatase family APA01_RS09035 PF13307 Helicase C-terminal domain APA01_RS09035 PF04851 Type III restriction enzyme, res subunit APA01_RS09040 PF00313 'Cold-shock' DNA-binding domain APA01_RS09045 PF01738 Dienelactone hydrolase family APA01_RS09050 PF00166 Chaperonin 10 Kd subunit APA01_RS09055 PF00118 TCP-1/cpn60 chaperonin family APA01_RS09065 PF01527 Transposase APA01_RS09075 PF13005 zinc-finger binding domain of transposase IS66 APA01_RS09075 PF13007 Transposase C of IS166 homeodomain APA01_RS09075 PF13817 IS66 C-terminal element APA01_RS09075 PF03050 Transposase IS66 family APA01_RS09090 PF13276 HTH-like domain APA01_RS09090 PF00665 Integrase core domain APA01_RS09090 PF13333 Integrase core domain APA01_RS09095 PF01527 Transposase APA01_RS09160 PF00483 Nucleotidyl transferase APA01_RS09165 PF16363 GDP-mannose 4,6 dehydratase APA01_RS09170 PF13340 Putative transposase of IS4/5 family (DUF4096) APA01_RS09225 PF13007 Transposase C of IS166 homeodomain APA01_RS09225 PF13005 zinc-finger binding domain of transposase IS66 APA01_RS09225 PF03050 Transposase IS66 family APA01_RS09225 PF13817 IS66 C-terminal element APA01_RS09235 PF01527 Transposase APA01_RS09255 PF00909 Ammonium Transporter Family APA01_RS09270 PF00561 alpha/beta hydrolase fold APA01_RS09275 PF00589 Phage integrase family APA01_RS09275 PF02899 Phage integrase, N-terminal SAM-like domain APA01_RS09280 PF17764 3′ DNA-binding domain (3′BD) APA01_RS09280 PF18074 Primosomal protein N C-terminal domain APA01_RS09280 PF18319 PriA DNA helicase Cys-rich region (CRR) domain APA01_RS09280 PF00270 DEAD/DEAH box helicase APA01_RS09285 PF02699 Preprotein translocase subunit APA01_RS09295 PF00355 Rieske [2Fe-2S] domain APA01_RS09300 PF00293 NUDIX domain APA01_RS09305 PF01050 Mannose-6-phosphate isomerase APA01_RS09305 PF00483 Nucleotidyl transferase APA01_RS09315 PF01053 Cys/Met metabolism PLP-dependent enzyme APA01_RS09320 PF04379 ApaG domain APA01_RS09325 PF01227 GTP cyclohydrolase I APA01_RS09335 PF00994 Probable molybdopterin binding domain APA01_RS09365 PF13533 Biotin-lipoyl like APA01_RS09395 PF00885 6,7-dimethyl-8-ribityllumazine synthase APA01_RS09400 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase APA01_RS09400 PF00925 GTP cyclohydrolase II APA01_RS09405 PF00677 Lumazine binding domain APA01_RS09410 PF01872 RibD C-terminal domain APA01_RS09410 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region APA01_RS09415 PF00032 Cytochrome b(C-terminal)/b6/petD APA01_RS09415 PF00033 Cytochrome b/b6/petB APA01_RS09415 PF02167 Cytochrome C1 family APA01_RS09420 PF02167 Cytochrome C1 family APA01_RS09420 PF00032 Cytochrome b(C-terminal)/b6/petD APA01_RS09420 PF00033 Cytochrome b/b6/petB APA01_RS09425 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal APA01_RS09425 PF00355 Rieske [2Fe-2S] domain APA01_RS09430 PF03358 NADPH-dependent FMN reductase APA01_RS09445 PF00860 Permease family APA01_RS09460 PF07859 alpha/beta hydrolase fold APA01_RS09500 PF04851 Type III restriction enzyme, res subunit APA01_RS09500 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) APA01_RS09500 PF08463 EcoEI R protein C-terminal APA01_RS09500 PF00271 Helicase conserved C-terminal domain APA01_RS09520 PF13333 Integrase core domain APA01_RS09520 PF00665 Integrase core domain APA01_RS09520 PF13276 HTH-like domain APA01_RS09525 PF01527 Transposase APA01_RS09550 PF00829 Ribosomal prokaryotic L21 protein APA01_RS09555 PF01016 Ribosomal L27 protein APA01_RS09560 PF01018 GTP1/OBG APA01_RS09560 PF01926 50S ribosome-binding GTPase APA01_RS09565 PF01472 PUA domain APA01_RS09565 PF00696 Amino acid kinase family APA01_RS09575 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) APA01_RS09580 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain APA01_RS09580 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain APA01_RS09590 PF07859 alpha/beta hydrolase fold APA01_RS09600 PF02381 MraZ protein, putative antitoxin-like APA01_RS09605 PF01795 MraW methylase family APA01_RS09615 PF03717 Penicillin-binding Protein dimerisation domain APA01_RS09615 PF00905 Penicillin binding protein transpeptidase domain APA01_RS09620 PF01225 Mur ligase family, catalytic domain APA01_RS09620 PF02875 Mur ligase family, glutamate ligase domain APA01_RS09620 PF08245 Mur ligase middle domain APA01_RS09625 PF01225 Mur ligase family, catalytic domain APA01_RS09625 PF02875 Mur ligase family, glutamate ligase domain APA01_RS09625 PF08245 Mur ligase middle domain APA01_RS09630 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 APA01_RS09630 PF00953 Glycosyl transferase family 4 APA01_RS09635 PF08245 Mur ligase middle domain APA01_RS09635 PF02875 Mur ligase family, glutamate ligase domain APA01_RS09640 PF01098 Cell cycle protein APA01_RS09645 PF04101 Glycosyltransferase family 28 C-terminal domain APA01_RS09645 PF03033 Glycosyltransferase family 28 N-terminal domain APA01_RS09650 PF01225 Mur ligase family, catalytic domain APA01_RS09650 PF02875 Mur ligase family, glutamate ligase domain APA01_RS09650 PF08245 Mur ligase middle domain APA01_RS09655 PF01565 FAD binding domain APA01_RS09655 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain APA01_RS09660 PF07478 D-ala D-ala ligase C-terminus APA01_RS09660 PF01820 D-ala D-ala ligase N-terminus APA01_RS09665 PF08478 POTRA domain, FtsQ-type APA01_RS09665 PF03799 Cell division protein FtsQ APA01_RS09670 PF02491 SHS2 domain inserted in FTSA APA01_RS09675 PF12327 FtsZ family, C-terminal domain APA01_RS09675 PF00091 Tubulin/FtsZ family, GTPase domain APA01_RS09680 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase APA01_RS09685 PF13525 Outer membrane lipoprotein APA01_RS09690 PF02463 RecF/RecN/SMC N terminal domain APA01_RS09695 PF03119 NAD-dependent DNA ligase C4 zinc finger domain APA01_RS09695 PF03120 NAD-dependent DNA ligase OB-fold domain APA01_RS09695 PF01653 NAD-dependent DNA ligase adenylation domain APA01_RS09695 PF12826 Helix-hairpin-helix motif APA01_RS09695 PF00533 BRCA1 C Terminus (BRCT) domain APA01_RS09700 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain APA01_RS09700 PF00391 PEP-utilising enzyme, mobile domain APA01_RS09700 PF02896 PEP-utilising enzyme, TIM barrel domain APA01_RS09705 PF03618 Kinase/pyrophosphorylase APA01_RS09715 PF01205 Uncharacterized protein family UPF0029 APA01_RS09730 PF01474 Class-II DAHP synthetase family APA01_RS09745 PF00749 tRNA synthetases class I (E and Q), catalytic domain APA01_RS09750 PF00857 Isochorismatase family APA01_RS09760 PF00403 Heavy-metal-associated domain APA01_RS09770 PF07731 Multicopper oxidase APA01_RS09770 PF00394 Multicopper oxidase APA01_RS09770 PF07732 Multicopper oxidase APA01_RS09775 PF05275 Copper resistance protein B precursor (CopB) APA01_RS09780 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain APA01_RS09780 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain APA01_RS09785 PF10369 Small subunit of acetolactate synthase APA01_RS09790 PF00205 Thiamine pyrophosphate enzyme, central domain APA01_RS09790 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APA01_RS09790 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APA01_RS09815 PF00271 Helicase conserved C-terminal domain APA01_RS09815 PF00270 DEAD/DEAH box helicase APA01_RS09835 PF00464 Serine hydroxymethyltransferase APA01_RS09840 PF13520 Amino acid permease APA01_RS09845 PF00490 Delta-aminolevulinic acid dehydratase APA01_RS09850 PF04377 Arginine-tRNA-protein transferase, C terminus APA01_RS09850 PF04376 Arginine-tRNA-protein transferase, N terminus APA01_RS09855 PF03989 DNA gyrase C-terminal domain, beta-propeller APA01_RS09855 PF00521 DNA gyrase/topoisomerase IV, subunit A APA01_RS09860 PF11967 Recombination protein O N terminal APA01_RS09860 PF02565 Recombination protein O C terminal APA01_RS09865 PF00889 Elongation factor TS APA01_RS09870 PF00318 Ribosomal protein S2 APA01_RS09875 PF00355 Rieske [2Fe-2S] domain APA01_RS09890 PF01063 Amino-transferase class IV APA01_RS09895 PF00425 chorismate binding enzyme APA01_RS09895 PF04715 Anthranilate synthase component I, N terminal region APA01_RS09900 PF02811 PHP domain APA01_RS09900 PF14579 Helix-hairpin-helix motif APA01_RS09900 PF17657 Bacterial DNA polymerase III alpha subunit finger domain APA01_RS09900 PF07733 Bacterial DNA polymerase III alpha NTPase domain APA01_RS09905 PF02569 Pantoate-beta-alanine ligase APA01_RS09910 PF01042 Endoribonuclease L-PSP APA01_RS09925 PF00155 Aminotransferase class I and II APA01_RS09930 PF00155 Aminotransferase class I and II APA01_RS09935 PF00749 tRNA synthetases class I (E and Q), catalytic domain APA01_RS09960 PF04055 Radical SAM superfamily APA01_RS09960 PF02310 B12 binding domain APA01_RS09965 PF00334 Nucleoside diphosphate kinase APA01_RS09970 PF00005 ABC transporter APA01_RS09970 PF12848 ABC transporter APA01_RS09980 PF00486 Transcriptional regulatory protein, C terminal APA01_RS09980 PF00072 Response regulator receiver domain APA01_RS09985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APA01_RS09985 PF00672 HAMP domain APA01_RS09985 PF00512 His Kinase A (phospho-acceptor) domain APA01_RS09995 PF05198 Translation initiation factor IF-3, N-terminal domain APA01_RS09995 PF00707 Translation initiation factor IF-3, C-terminal domain APA01_RS10000 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain APA01_RS10000 PF03129 Anticodon binding domain APA01_RS10000 PF02824 TGS domain APA01_RS10000 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) APA01_RS10020 PF01513 ATP-NAD kinase APA01_RS10035 PF00075 RNase H APA01_RS10040 PF01636 Phosphotransferase enzyme family APA01_RS10045 PF02401 LytB protein APA01_RS10055 PF03109 ABC1 family APA01_RS10065 PF01493 GXGXG motif APA01_RS10065 PF01645 Conserved region in glutamate synthase APA01_RS10065 PF00310 Glutamine amidotransferases class-II APA01_RS10065 PF04898 Glutamate synthase central domain APA01_RS10070 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster APA01_RS10070 PF07992 Pyridine nucleotide-disulphide oxidoreductase APA01_RS10090 PF01520 N-acetylmuramoyl-L-alanine amidase APA01_RS10095 PF12111 Polyribonucleotide phosphorylase C terminal APA01_RS10095 PF10150 Ribonuclease E/G family APA01_RS10095 PF00575 S1 RNA binding domain APA01_RS10100 PF01634 ATP phosphoribosyltransferase APA01_RS10105 PF00815 Histidinol dehydrogenase APA01_RS10110 PF01176 Translation initiation factor 1A / IF-1 APA01_RS10115 PF02545 Maf-like protein APA01_RS10125 PF03884 DNA gyrase inhibitor YacG APA01_RS10255 PF02899 Phage integrase, N-terminal SAM-like domain APA01_RS10255 PF00589 Phage integrase family APA01_RS10325 PF11490 DNA polymerase III polC-type N-terminus II APA01_RS10325 PF07733 Bacterial DNA polymerase III alpha NTPase domain APA01_RS10325 PF00929 Exonuclease APA01_RS10325 PF14579 Helix-hairpin-helix motif APA01_RS10325 PF02811 PHP domain APA01_RS10325 PF01336 OB-fold nucleic acid binding domain APA01_RS10325 PF17657 Bacterial DNA polymerase III alpha subunit finger domain APA01_RS10380 PF00589 Phage integrase family APA01_RS10400 PF00171 Aldehyde dehydrogenase family APA01_RS10405 PF01565 FAD binding domain APA01_RS10405 PF09330 D-lactate dehydrogenase, membrane binding APA01_RS10410 PF15887 Putative zinc-binding metallo-peptidase APA01_RS10410 PF10005 zinc-ribbon domain APA01_RS10420 PF14403 Circularly permuted ATP-grasp type 2 APA01_RS10430 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain APA01_RS10430 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain APA01_RS10435 PF02445 Quinolinate synthetase A protein APA01_RS10445 PF16925 Tetracyclin repressor-like, C-terminal domain APA01_RS10445 PF00440 Bacterial regulatory proteins, tetR family APA01_RS10450 PF07992 Pyridine nucleotide-disulphide oxidoreductase APA01_RS10455 PF00171 Aldehyde dehydrogenase family APA01_RS10460 PF07690 Major Facilitator Superfamily APA01_RS10470 PF03358 NADPH-dependent FMN reductase APA01_RS10475 PF02678 Pirin APA01_RS10475 PF05726 Pirin C-terminal cupin domain APA01_RS10480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APA01_RS10480 PF03466 LysR substrate binding domain APA01_RS10485 PF02472 Biopolymer transport protein ExbD/TolR APA01_RS10490 PF02472 Biopolymer transport protein ExbD/TolR APA01_RS10495 PF01618 MotA/TolQ/ExbB proton channel family APA01_RS10515 PF00892 EamA-like transporter family APA01_RS10520 PF03746 LamB/YcsF family APA01_RS10525 PF02626 Carboxyltransferase domain, subdomain A and B APA01_RS10535 PF00106 short chain dehydrogenase APA01_RS10540 PF00364 Biotin-requiring enzyme APA01_RS10545 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain APA01_RS10545 PF02785 Biotin carboxylase C-terminal domain APA01_RS10545 PF00289 Biotin carboxylase, N-terminal domain APA01_RS10555 PF00155 Aminotransferase class I and II APA01_RS10560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APA01_RS10560 PF03466 LysR substrate binding domain APA01_RS10565 PF01425 Amidase APA01_RS10570 PF00106 short chain dehydrogenase APA01_RS10575 PF00128 Alpha amylase, catalytic domain APA01_RS10580 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) APA01_RS10580 PF00128 Alpha amylase, catalytic domain APA01_RS10580 PF11941 Domain of unknown function (DUF3459) APA01_RS10585 PF00128 Alpha amylase, catalytic domain APA01_RS10585 PF02806 Alpha amylase, C-terminal all-beta domain APA01_RS10585 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) APA01_RS10590 PF00534 Glycosyl transferases group 1 APA01_RS10590 PF08323 Starch synthase catalytic domain APA01_RS10595 PF00128 Alpha amylase, catalytic domain APA01_RS10595 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) APA01_RS10610 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APA01_RS10610 PF00205 Thiamine pyrophosphate enzyme, central domain APA01_RS10610 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APA01_RS10615 PF01527 Transposase APA01_RS10620 PF13333 Integrase core domain APA01_RS10620 PF13276 HTH-like domain APA01_RS10620 PF00665 Integrase core domain APA01_RS10625 PF01494 FAD binding domain APA01_RS10630 PF02630 SCO1/SenC APA01_RS10650 PF13276 HTH-like domain APA01_RS10650 PF13333 Integrase core domain APA01_RS10650 PF00665 Integrase core domain APA01_RS10655 PF01527 Transposase APA01_RS10695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APA01_RS10695 PF03466 LysR substrate binding domain APA01_RS10700 PF04632 Fusaric acid resistance protein family APA01_RS10730 PF00893 Small Multidrug Resistance protein APA01_RS10735 PF02403 Seryl-tRNA synthetase N-terminal domain APA01_RS10735 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) APA01_RS10740 PF00902 Sec-independent protein translocase protein (TatC) APA01_RS10745 PF02416 mttA/Hcf106 family APA01_RS10750 PF04079 Segregation and condensation complex subunit ScpB APA01_RS10755 PF02616 Segregation and condensation protein ScpA APA01_RS10765 PF00750 tRNA synthetases class I (R) APA01_RS10765 PF05746 DALR anticodon binding domain APA01_RS10765 PF03485 Arginyl tRNA synthetase N terminal domain APA01_RS10770 PF01966 HD domain APA01_RS10770 PF13286 Phosphohydrolase-associated domain APA01_RS10775 PF01521 Iron-sulphur cluster biosynthesis APA01_RS10780 PF03372 Endonuclease/Exonuclease/phosphatase family APA01_RS10800 PF12706 Beta-lactamase superfamily domain APA01_RS10805 PF03070 TENA/THI-4/PQQC family APA01_RS10810 PF05402 Coenzyme PQQ synthesis protein D (PqqD) APA01_RS10815 PF13186 Iron-sulfur cluster-binding domain APA01_RS10815 PF04055 Radical SAM superfamily APA01_RS10825 PF00574 Clp protease APA01_RS10835 PF00155 Aminotransferase class I and II APA01_RS10840 PF00742 Homoserine dehydrogenase APA01_RS10840 PF03447 Homoserine dehydrogenase, NAD binding domain APA01_RS10840 PF01842 ACT domain APA01_RS10845 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded APA01_RS10850 PF17768 RecJ OB domain APA01_RS10850 PF02272 DHHA1 domain APA01_RS10850 PF01368 DHH family APA01_RS10855 PF04545 Sigma-70, region 4 APA01_RS10855 PF00140 Sigma-70 factor, region 1.2 APA01_RS10855 PF04542 Sigma-70 region 2 APA01_RS10860 PF00849 RNA pseudouridylate synthase APA01_RS10865 PF01032 FecCD transport family APA01_RS10870 PF00005 ABC transporter APA01_RS10875 PF02696 Uncharacterized ACR, YdiU/UPF0061 family APA01_RS10885 PF01063 Amino-transferase class IV APA01_RS10890 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain APA01_RS10890 PF00476 DNA polymerase family A APA01_RS10890 PF01367 5'-3' exonuclease, C-terminal SAM fold APA01_RS10890 PF01612 3'-5' exonuclease APA01_RS10905 PF08946 Osmosensory transporter coiled coil APA01_RS10905 PF00083 Sugar (and other) transporter APA01_RS10910 PF01609 Transposase DDE domain APA01_RS10920 PF02322 Cytochrome bd terminal oxidase subunit II APA01_RS10925 PF01654 Cytochrome bd terminal oxidase subunit I APA01_RS10935 PF04454 Encapsulating protein for peroxidase APA01_RS10940 PF00324 Amino acid permease APA01_RS10950 PF13360 PQQ-like domain APA01_RS10950 PF01011 PQQ enzyme repeat APA01_RS10960 PF14552 Tautomerase enzyme APA01_RS10965 PF00202 Aminotransferase class-III APA01_RS10970 PF00155 Aminotransferase class I and II APA01_RS10970 PF00392 Bacterial regulatory proteins, gntR family APA01_RS10975 PF01546 Peptidase family M20/M25/M40 APA01_RS10975 PF07687 Peptidase dimerisation domain APA01_RS10980 PF01180 Dihydroorotate dehydrogenase APA01_RS10985 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster APA01_RS10985 PF07992 Pyridine nucleotide-disulphide oxidoreductase APA01_RS10990 PF13005 zinc-finger binding domain of transposase IS66 APA01_RS10990 PF13007 Transposase C of IS166 homeodomain APA01_RS10990 PF03050 Transposase IS66 family APA01_RS10990 PF13817 IS66 C-terminal element APA01_RS11000 PF01527 Transposase APA01_RS11015 PF01979 Amidohydrolase family APA01_RS11020 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin APA01_RS11035 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase APA01_RS11040 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family APA01_RS11050 PF02556 Preprotein translocase subunit SecB APA01_RS11060 PF02556 Preprotein translocase subunit SecB APA01_RS11070 PF04166 Pyridoxal phosphate biosynthetic protein PdxA APA01_RS11075 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ APA01_RS11085 PF03702 Anhydro-N-acetylmuramic acid kinase APA01_RS11100 PF00474 Sodium:solute symporter family APA01_RS11110 PF13532 2OG-Fe(II) oxygenase superfamily APA01_RS11115 PF00144 Beta-lactamase APA01_RS11120 PF01381 Helix-turn-helix APA01_RS11125 PF00970 Oxidoreductase FAD-binding domain APA01_RS11125 PF00042 Globin APA01_RS11125 PF00175 Oxidoreductase NAD-binding domain APA01_RS11130 PF00528 Binding-protein-dependent transport system inner membrane component APA01_RS11135 PF09383 NIL domain APA01_RS11135 PF00005 ABC transporter APA01_RS11140 PF03180 NLPA lipoprotein APA01_RS11145 PF02913 FAD linked oxidases, C-terminal domain APA01_RS11145 PF01565 FAD binding domain APA01_RS11150 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APA01_RS11150 PF10414 Sirohaem synthase dimerisation region APA01_RS11150 PF14824 Sirohaem biosynthesis protein central APA01_RS11160 PF07859 alpha/beta hydrolase fold APA01_RS11165 PF01047 MarR family APA01_RS11170 PF01425 Amidase APA01_RS11175 PF01613 Flavin reductase like domain APA01_RS11180 PF00596 Class II Aldolase and Adducin N-terminal domain APA01_RS11190 PF00175 Oxidoreductase NAD-binding domain APA01_RS11190 PF00111 2Fe-2S iron-sulfur cluster binding domain APA01_RS11195 PF00106 short chain dehydrogenase APA01_RS11205 PF00355 Rieske [2Fe-2S] domain APA01_RS11205 PF00848 Ring hydroxylating alpha subunit (catalytic domain) APA01_RS11215 PF08028 Acyl-CoA dehydrogenase, C-terminal domain APA01_RS11225 PF00171 Aldehyde dehydrogenase family APA01_RS11230 PF13442 Cytochrome C oxidase, cbb3-type, subunit III APA01_RS11230 PF13360 PQQ-like domain APA01_RS11235 PF07690 Major Facilitator Superfamily APA01_RS11250 PF00528 Binding-protein-dependent transport system inner membrane component APA01_RS11255 PF00528 Binding-protein-dependent transport system inner membrane component APA01_RS11265 PF13340 Putative transposase of IS4/5 family (DUF4096) APA01_RS11270 PF00528 Binding-protein-dependent transport system inner membrane component APA01_RS11275 PF13416 Bacterial extracellular solute-binding protein APA01_RS11280 PF00005 ABC transporter APA01_RS11280 PF08402 TOBE domain APA01_RS11285 PF00171 Aldehyde dehydrogenase family APA01_RS11305 PF18331 PKHD-type hydroxylase C-terminal domain APA01_RS11305 PF13640 2OG-Fe(II) oxygenase superfamily APA01_RS11320 PF07715 TonB-dependent Receptor Plug Domain APA01_RS11320 PF00593 TonB dependent receptor APA01_RS11325 PF01618 MotA/TolQ/ExbB proton channel family APA01_RS11330 PF02472 Biopolymer transport protein ExbD/TolR APA01_RS11345 PF00355 Rieske [2Fe-2S] domain APA01_RS11350 PF00375 Sodium:dicarboxylate symporter family APA01_RS11370 PF00732 GMC oxidoreductase APA01_RS11370 PF05199 GMC oxidoreductase APA01_RS11375 PF13442 Cytochrome C oxidase, cbb3-type, subunit III APA01_RS11375 PF00034 Cytochrome c APA01_RS11380 PF00171 Aldehyde dehydrogenase family APA01_RS11385 PF07690 Major Facilitator Superfamily APA01_RS11390 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase APA01_RS11395 PF02277 Phosphoribosyltransferase APA01_RS11400 PF02654 Cobalamin-5-phosphate synthase APA01_RS11405 PF00155 Aminotransferase class I and II APA01_RS11410 PF03186 CobD/Cbib protein APA01_RS11415 PF00881 Nitroreductase family APA01_RS11420 PF07685 CobB/CobQ-like glutamine amidotransferase domain APA01_RS11420 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain APA01_RS11425 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP APA01_RS11425 PF12557 Cob(I)alamin adenosyltransferase N terminal APA01_RS11435 PF07685 CobB/CobQ-like glutamine amidotransferase domain APA01_RS11435 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain APA01_RS11440 PF02514 CobN/Magnesium Chelatase APA01_RS11445 PF07683 Cobalamin synthesis protein cobW C-terminal domain APA01_RS11445 PF02492 CobW/HypB/UreG, nucleotide-binding domain APA01_RS11465 PF04632 Fusaric acid resistance protein family APA01_RS11470 PF01184 GPR1/FUN34/yaaH family APA01_RS11475 PF00378 Enoyl-CoA hydratase/isomerase APA01_RS11480 PF01613 Flavin reductase like domain APA01_RS11485 PF00950 ABC 3 transport family APA01_RS11490 PF00005 ABC transporter APA01_RS11500 PF01475 Ferric uptake regulator family APA01_RS11515 PF01008 Initiation factor 2 subunit family APA01_RS11530 PF00291 Pyridoxal-phosphate dependent enzyme APA01_RS11535 PF00117 Glutamine amidotransferase class-I APA01_RS11535 PF00958 GMP synthase C terminal domain APA01_RS11535 PF02540 NAD synthase APA01_RS11555 PF00239 Resolvase, N terminal domain APA01_RS11555 PF02796 Helix-turn-helix domain of resolvase APA01_RS11590 PF13340 Putative transposase of IS4/5 family (DUF4096) APA01_RS11610 PF01609 Transposase DDE domain APA01_RS11655 PF00083 Sugar (and other) transporter APA01_RS11660 PF10145 Phage-related minor tail protein APA01_RS11660 PF01464 Transglycosylase SLT domain APA01_RS11660 PF01551 Peptidase family M23 APA01_RS11665 PF02652 L-lactate permease APA01_RS11675 PF01370 NAD dependent epimerase/dehydratase family APA01_RS11680 PF01790 Prolipoprotein diacylglyceryl transferase APA01_RS11690 PF02578 Multi-copper polyphenol oxidoreductase laccase APA01_RS11710 PF00005 ABC transporter APA01_RS11715 PF02694 Uncharacterised BCR, YnfA/UPF0060 family APA01_RS11730 PF00155 Aminotransferase class I and II APA01_RS11740 PF02779 Transketolase, pyrimidine binding domain APA01_RS11740 PF02780 Transketolase, C-terminal domain APA01_RS11740 PF00456 Transketolase, thiamine diphosphate binding domain APA01_RS11745 PF00923 Transaldolase/Fructose-6-phosphate aldolase APA01_RS11750 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain APA01_RS11750 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase APA01_RS11760 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase APA01_RS11765 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) APA01_RS11790 PF00654 Voltage gated chloride channel APA01_RS11795 PF00107 Zinc-binding dehydrogenase APA01_RS11795 PF08240 Alcohol dehydrogenase GroES-like domain APA01_RS11800 PF01168 Alanine racemase, N-terminal domain APA01_RS11805 PF02705 K+ potassium transporter APA01_RS11810 PF04055 Radical SAM superfamily APA01_RS11810 PF06969 HemN C-terminal domain APA01_RS11830 PF00005 ABC transporter APA01_RS11835 PF00005 ABC transporter APA01_RS11835 PF12399 Branched-chain amino acid ATP-binding cassette transporter APA01_RS11845 PF02653 Branched-chain amino acid transport system / permease component APA01_RS11855 PF00497 Bacterial extracellular solute-binding proteins, family 3 APA01_RS11855 PF00072 Response regulator receiver domain APA01_RS11855 PF01627 Hpt domain APA01_RS11855 PF00512 His Kinase A (phospho-acceptor) domain APA01_RS11855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APA01_RS11860 PF00072 Response regulator receiver domain APA01_RS11860 PF00486 Transcriptional regulatory protein, C terminal APA01_RS11900 PF02492 CobW/HypB/UreG, nucleotide-binding domain APA01_RS11905 PF01730 UreF APA01_RS11910 PF05194 UreE urease accessory protein, C-terminal domain APA01_RS11910 PF02814 UreE urease accessory protein, N-terminal domain APA01_RS11915 PF00449 Urease alpha-subunit, N-terminal domain APA01_RS11915 PF01979 Amidohydrolase family APA01_RS11920 PF00699 Urease beta subunit APA01_RS11925 PF00547 Urease, gamma subunit APA01_RS11930 PF01774 UreD urease accessory protein APA01_RS11935 PF03824 High-affinity nickel-transport protein APA01_RS11940 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APA01_RS11940 PF00205 Thiamine pyrophosphate enzyme, central domain APA01_RS11940 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APA01_RS11960 PF00210 Ferritin-like domain APA01_RS11965 PF03960 ArsC family APA01_RS11975 PF03352 Methyladenine glycosylase APA01_RS11985 PF00578 AhpC/TSA family APA01_RS11985 PF10417 C-terminal domain of 1-Cys peroxiredoxin APA01_RS11990 PF00753 Metallo-beta-lactamase superfamily APA01_RS11995 PF01925 Sulfite exporter TauE/SafE APA01_RS12005 PF03960 ArsC family APA01_RS12020 PF02321 Outer membrane efflux protein APA01_RS12025 PF13533 Biotin-lipoyl like APA01_RS12035 PF03466 LysR substrate binding domain APA01_RS12035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APA01_RS12050 PF07690 Major Facilitator Superfamily APA01_RS12055 PF01609 Transposase DDE domain APA01_RS12060 PF17645 Arylmalonate decarboxylase APA01_RS12065 PF00561 alpha/beta hydrolase fold APA01_RS12070 PF00857 Isochorismatase family APA01_RS12080 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase APA01_RS12080 PF13442 Cytochrome C oxidase, cbb3-type, subunit III APA01_RS12080 PF00034 Cytochrome c APA01_RS12085 PF00111 2Fe-2S iron-sulfur cluster binding domain APA01_RS12085 PF01799 [2Fe-2S] binding domain APA01_RS12090 PF01494 FAD binding domain APA01_RS12095 PF12802 MarR family APA01_RS12115 PF00004 ATPase family associated with various cellular activities (AAA) APA01_RS12115 PF17862 AAA+ lid domain APA01_RS12115 PF01434 Peptidase family M41 APA01_RS12125 PF03743 Bacterial conjugation TrbI-like protein APA01_RS12135 PF13276 HTH-like domain APA01_RS12135 PF00665 Integrase core domain APA01_RS12135 PF13333 Integrase core domain APA01_RS12140 PF01527 Transposase APA01_RS12195 PF00665 Integrase core domain APA01_RS12195 PF13333 Integrase core domain APA01_RS12195 PF13276 HTH-like domain APA01_RS12200 PF01527 Transposase APA01_RS12225 PF13276 HTH-like domain APA01_RS12225 PF00665 Integrase core domain APA01_RS12225 PF13333 Integrase core domain APA01_RS12230 PF01527 Transposase APA01_RS12275 PF01370 NAD dependent epimerase/dehydratase family APA01_RS12285 PF00753 Metallo-beta-lactamase superfamily APA01_RS12295 PF13478 XdhC Rossmann domain APA01_RS12295 PF02625 XdhC and CoxI family APA01_RS12315 PF02347 Glycine cleavage system P-protein APA01_RS12320 PF01597 Glycine cleavage H-protein APA01_RS12325 PF08669 Glycine cleavage T-protein C-terminal barrel domain APA01_RS12325 PF01571 Aminomethyltransferase folate-binding domain APA01_RS12330 PF17284 Spermidine synthase tetramerisation domain APA01_RS12335 PF02675 S-adenosylmethionine decarboxylase APA01_RS12345 PF03466 LysR substrate binding domain APA01_RS12345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APA01_RS12355 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD APA01_RS12360 PF01467 Cytidylyltransferase-like APA01_RS12365 PF03989 DNA gyrase C-terminal domain, beta-propeller APA01_RS12365 PF00521 DNA gyrase/topoisomerase IV, subunit A APA01_RS12380 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain APA01_RS12380 PF01138 3' exoribonuclease family, domain 1 APA01_RS12380 PF00575 S1 RNA binding domain APA01_RS12380 PF03725 3' exoribonuclease family, domain 2 APA01_RS12380 PF00013 KH domain APA01_RS12385 PF00312 Ribosomal protein S15 APA01_RS12390 PF01509 TruB family pseudouridylate synthase (N terminal domain) APA01_RS12390 PF16198 tRNA pseudouridylate synthase B C-terminal domain APA01_RS12395 PF02405 Permease MlaE APA01_RS12400 PF00005 ABC transporter APA01_RS12405 PF02470 MlaD protein APA01_RS12450 PF00664 ABC transporter transmembrane region APA01_RS12450 PF00005 ABC transporter APA01_RS12450 PF03412 Peptidase C39 family APA01_RS12460 PF02574 Homocysteine S-methyltransferase APA01_RS12460 PF02607 B12 binding domain APA01_RS12460 PF02965 Vitamin B12 dependent methionine synthase, activation domain APA01_RS12460 PF00809 Pterin binding enzyme APA01_RS12460 PF02310 B12 binding domain APA01_RS12475 PF00156 Phosphoribosyl transferase domain APA01_RS12475 PF13537 Glutamine amidotransferase domain APA01_RS12485 PF02470 MlaD protein APA01_RS12490 PF04403 Paraquat-inducible protein A APA01_RS12500 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase APA01_RS12505 PF00535 Glycosyl transferase family 2 APA01_RS12510 PF00430 ATP synthase B/B' CF(0) APA01_RS12515 PF00430 ATP synthase B/B' CF(0) APA01_RS12520 PF00137 ATP synthase subunit C APA01_RS12525 PF00119 ATP synthase A chain APA01_RS12530 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter APA01_RS12535 PF00448 SRP54-type protein, GTPase domain APA01_RS12535 PF02881 SRP54-type protein, helical bundle domain APA01_RS12540 PF04055 Radical SAM superfamily APA01_RS12540 PF00919 Uncharacterized protein family UPF0004 APA01_RS12545 PF01678 Diaminopimelate epimerase APA01_RS12550 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily APA01_RS12560 PF03880 DbpA RNA binding domain APA01_RS12560 PF00271 Helicase conserved C-terminal domain APA01_RS12560 PF00270 DEAD/DEAH box helicase APA01_RS12575 PF00380 Ribosomal protein S9/S16 APA01_RS12580 PF00572 Ribosomal protein L13 APA01_RS12595 PF01895 PhoU domain APA01_RS12600 PF00005 ABC transporter APA01_RS12605 PF00528 Binding-protein-dependent transport system inner membrane component APA01_RS12610 PF00528 Binding-protein-dependent transport system inner membrane component APA01_RS12615 PF00920 Dehydratase family APA01_RS12625 PF00107 Zinc-binding dehydrogenase APA01_RS12625 PF08240 Alcohol dehydrogenase GroES-like domain APA01_RS12635 PF13180 PDZ domain APA01_RS12650 PF10609 NUBPL iron-transfer P-loop NTPase APA01_RS12665 PF02511 Thymidylate synthase complementing protein APA01_RS12675 PF05681 Fumarate hydratase (Fumerase) APA01_RS12675 PF05683 Fumarase C-terminus APA01_RS12680 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily APA01_RS12690 PF01266 FAD dependent oxidoreductase APA01_RS12695 PF00842 Alanine racemase, C-terminal domain APA01_RS12695 PF01168 Alanine racemase, N-terminal domain APA01_RS12700 PF01037 Lrp/AsnC ligand binding domain APA01_RS12705 PF02033 Ribosome-binding factor A APA01_RS12710 PF00009 Elongation factor Tu GTP binding domain APA01_RS12710 PF11987 Translation-initiation factor 2 APA01_RS12710 PF08364 Bacterial translation initiation factor IF-2 associated region APA01_RS12710 PF04760 Translation initiation factor IF-2, N-terminal region APA01_RS12720 PF00575 S1 RNA binding domain APA01_RS12720 PF13184 NusA-like KH domain APA01_RS12720 PF08529 NusA N-terminal domain APA01_RS12725 PF17384 RimP C-terminal SH3 domain APA01_RS12725 PF02576 RimP N-terminal domain APA01_RS12735 PF02861 Clp amino terminal domain, pathogenicity island component APA01_RS12735 PF17871 AAA lid domain APA01_RS12735 PF10431 C-terminal, D2-small domain, of ClpB protein APA01_RS12735 PF07724 AAA domain (Cdc48 subfamily) APA01_RS12735 PF00004 ATPase family associated with various cellular activities (AAA) APA01_RS12745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APA01_RS12745 PF03466 LysR substrate binding domain APA01_RS12750 PF00528 Binding-protein-dependent transport system inner membrane component APA01_RS12755 PF00005 ABC transporter APA01_RS12760 PF00694 Aconitase C-terminal domain APA01_RS12760 PF00330 Aconitase family (aconitate hydratase) APA01_RS12765 PF00005 ABC transporter APA01_RS12770 PF03379 CcmB protein APA01_RS12780 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain APA01_RS12780 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain APA01_RS12785 PF03631 Virulence factor BrkB APA01_RS12790 PF03330 Lytic transglycolase APA01_RS12790 PF05036 Sporulation related domain APA01_RS12795 PF01220 Dehydroquinase class II APA01_RS12800 PF00364 Biotin-requiring enzyme APA01_RS12805 PF02785 Biotin carboxylase C-terminal domain APA01_RS12805 PF00289 Biotin carboxylase, N-terminal domain APA01_RS12805 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain APA01_RS12810 PF00083 Sugar (and other) transporter APA01_RS12815 PF13667 ThiC-associated domain APA01_RS12815 PF01964 Radical SAM ThiC family APA01_RS12830 PF03239 Iron permease FTR1 family APA01_RS12835 PF10634 Fe2+ transport protein APA01_RS12840 PF04966 Carbohydrate-selective porin, OprB family APA01_RS12855 PF04966 Carbohydrate-selective porin, OprB family APA01_RS12865 PF00202 Aminotransferase class-III APA01_RS12875 PF03652 Holliday junction resolvase APA01_RS12880 PF02686 Glu-tRNAGln amidotransferase C subunit APA01_RS12885 PF01425 Amidase APA01_RS12890 PF02637 GatB domain APA01_RS12890 PF02934 GatB/GatE catalytic domain APA01_RS12900 PF00005 ABC transporter APA01_RS12900 PF00664 ABC transporter transmembrane region APA01_RS12905 PF00730 HhH-GPD superfamily base excision DNA repair protein APA01_RS12905 PF10576 Iron-sulfur binding domain of endonuclease III APA01_RS12905 PF00633 Helix-hairpin-helix motif APA01_RS12910 PF00762 Ferrochelatase APA01_RS12915 PF00730 HhH-GPD superfamily base excision DNA repair protein APA01_RS12915 PF14815 NUDIX domain APA01_RS12935 PF12100 Domain of unknown function (DUF3576) APA01_RS12940 PF00133 tRNA synthetases class I (I, L, M and V) APA01_RS12940 PF08264 Anticodon-binding domain of tRNA APA01_RS12940 PF13603 Leucyl-tRNA synthetase, Domain 2 APA01_RS12985 PF02321 Outer membrane efflux protein APA01_RS12995 PF01012 Electron transfer flavoprotein domain APA01_RS12995 PF00766 Electron transfer flavoprotein FAD-binding domain APA01_RS13000 PF01012 Electron transfer flavoprotein domain APA01_RS13015 PF04055 Radical SAM superfamily APA01_RS13025 PF00027 Cyclic nucleotide-binding domain APA01_RS13025 PF13545 Crp-like helix-turn-helix domain APA01_RS13030 PF13180 PDZ domain APA01_RS13035 PF14437 MafB19-like deaminase APA01_RS13040 PF07722 Peptidase C26 APA01_RS13045 PF00849 RNA pseudouridylate synthase APA01_RS13045 PF01479 S4 domain APA01_RS13055 PF00436 Single-strand binding protein family APA01_RS13065 PF01258 Prokaryotic dksA/traR C4-type zinc finger APA01_RS13085 PF00239 Resolvase, N terminal domain APA01_RS13085 PF02796 Helix-turn-helix domain of resolvase APA01_RS13110 PF13340 Putative transposase of IS4/5 family (DUF4096) APA01_RS13115 PF13439 Glycosyltransferase Family 4 APA01_RS13115 PF00534 Glycosyl transferases group 1 APA01_RS13125 PF00579 tRNA synthetases class I (W and Y) APA01_RS13130 PF01523 Putative modulator of DNA gyrase APA01_RS13135 PF00300 Histidine phosphatase superfamily (branch 1) APA01_RS13145 PF16363 GDP-mannose 4,6 dehydratase APA01_RS13150 PF00483 Nucleotidyl transferase APA01_RS13155 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase APA01_RS13160 PF04321 RmlD substrate binding domain APA01_RS13170 PF01580 FtsK/SpoIIIE family APA01_RS13170 PF09397 Ftsk gamma domain APA01_RS13170 PF17854 FtsK alpha domain APA01_RS13170 PF13491 4TM region of DNA translocase FtsK/SpoIIIE APA01_RS13175 PF01479 S4 domain APA01_RS13175 PF00849 RNA pseudouridylate synthase APA01_RS13180 PF13439 Glycosyltransferase Family 4 APA01_RS13180 PF00534 Glycosyl transferases group 1 APA01_RS13195 PF00111 2Fe-2S iron-sulfur cluster binding domain APA01_RS13200 PF00266 Aminotransferase class-V APA01_RS13205 PF00266 Aminotransferase class-V APA01_RS13210 PF02129 X-Pro dipeptidyl-peptidase (S15 family) APA01_RS13220 PF09190 DALR domain APA01_RS13220 PF01406 tRNA synthetases class I (C) catalytic domain APA01_RS13230 PF08245 Mur ligase middle domain APA01_RS13230 PF02875 Mur ligase family, glutamate ligase domain APA01_RS13235 PF17848 Acetyl-coA carboxylase zinc finger domain APA01_RS13235 PF01039 Carboxyl transferase domain APA01_RS13240 PF00085 Thioredoxin APA01_RS13245 PF13361 UvrD-like helicase C-terminal domain APA01_RS13245 PF00580 UvrD/REP helicase N-terminal domain APA01_RS13245 PF12705 PD-(D/E)XK nuclease superfamily APA01_RS13250 PF12705 PD-(D/E)XK nuclease superfamily APA01_RS13255 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE APA01_RS13260 PF00486 Transcriptional regulatory protein, C terminal APA01_RS13260 PF00072 Response regulator receiver domain APA01_RS13265 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain APA01_RS13265 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I APA01_RS13265 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III APA01_RS13265 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II APA01_RS13270 PF00809 Pterin binding enzyme APA01_RS13275 PF17862 AAA+ lid domain APA01_RS13275 PF00004 ATPase family associated with various cellular activities (AAA) APA01_RS13275 PF01434 Peptidase family M41 APA01_RS13275 PF06480 FtsH Extracellular APA01_RS13280 PF01171 PP-loop family APA01_RS13290 PF00691 OmpA family APA01_RS13295 PF04052 TolB amino-terminal domain APA01_RS13295 PF07676 WD40-like Beta Propeller Repeat APA01_RS13305 PF02472 Biopolymer transport protein ExbD/TolR APA01_RS13310 PF01618 MotA/TolQ/ExbB proton channel family APA01_RS13315 PF03061 Thioesterase superfamily APA01_RS13320 PF17864 RuvB AAA lid domain APA01_RS13320 PF05496 Holliday junction DNA helicase RuvB P-loop domain APA01_RS13320 PF05491 RuvB C-terminal winged helix domain APA01_RS13325 PF07499 RuvA, C-terminal domain APA01_RS13325 PF01330 RuvA N terminal domain APA01_RS13330 PF02075 Crossover junction endodeoxyribonuclease RuvC APA01_RS13335 PF01709 Transcriptional regulator APA01_RS13340 PF01043 SecA preprotein cross-linking domain APA01_RS13340 PF02810 SEC-C motif APA01_RS13340 PF07517 SecA DEAD-like domain APA01_RS13340 PF07516 SecA Wing and Scaffold domain APA01_RS13350 PF01960 ArgJ family APA01_RS13360 PF00924 Mechanosensitive ion channel APA01_RS13375 PF00226 DnaJ domain APA01_RS13375 PF01556 DnaJ C terminal domain APA01_RS13375 PF00684 DnaJ central domain APA01_RS13390 PF03807 NADP oxidoreductase coenzyme F420-dependent APA01_RS13390 PF14748 Pyrroline-5-carboxylate reductase dimerisation APA01_RS13410 PF00216 Bacterial DNA-binding protein APA01_RS13430 PF00535 Glycosyl transferase family 2 APA01_RS13440 PF00795 Carbon-nitrogen hydrolase APA01_RS13440 PF02540 NAD synthase APA01_RS13445 PF00475 Imidazoleglycerol-phosphate dehydratase APA01_RS13450 PF00117 Glutamine amidotransferase class-I APA01_RS13455 PF00977 Histidine biosynthesis protein APA01_RS13460 PF00977 Histidine biosynthesis protein APA01_RS13465 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase APA01_RS13470 PF01230 HIT domain APA01_RS13475 PF00881 Nitroreductase family APA01_RS13480 PF01494 FAD binding domain APA01_RS13485 PF13811 Domain of unknown function (DUF4186) APA01_RS13505 PF17762 HTH domain found in ParB protein APA01_RS13505 PF02195 ParB-like nuclease domain APA01_RS13510 PF13614 AAA domain APA01_RS13515 PF02527 rRNA small subunit methyltransferase G APA01_RS13520 PF13932 GidA associated domain APA01_RS13520 PF01134 Glucose inhibited division protein A APA01_RS13525 PF12631 MnmE helical domain APA01_RS13525 PF01926 50S ribosome-binding GTPase APA01_RS13525 PF10396 GTP-binding protein TrmE N-terminus APA01_RS13530 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain APA01_RS13530 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain APA01_RS13545 PF01609 Transposase DDE domain APA01_RS13560 PF03641 Possible lysine decarboxylase APA01_RS13565 PF07690 Major Facilitator Superfamily APA01_RS13575 PF03653 Uncharacterised protein family (UPF0093) APA01_RS13580 PF13419 Haloacid dehalogenase-like hydrolase APA01_RS13585 PF01208 Uroporphyrinogen decarboxylase (URO-D) APA01_RS13590 PF02545 Maf-like protein APA01_RS13625 PF00239 Resolvase, N terminal domain APA01_RS13625 PF02796 Helix-turn-helix domain of resolvase APA01_RS13665 PF01527 Transposase APA01_RS13675 PF00580 UvrD/REP helicase N-terminal domain APA01_RS13675 PF13361 UvrD-like helicase C-terminal domain APA01_RS13680 PF01548 Transposase APA01_RS13680 PF02371 Transposase IS116/IS110/IS902 family APA01_RS13685 PF02371 Transposase IS116/IS110/IS902 family APA01_RS13685 PF01548 Transposase APA01_RS13690 PF00239 Resolvase, N terminal domain APA01_RS13700 PF01232 Mannitol dehydrogenase Rossmann domain APA01_RS13700 PF08125 Mannitol dehydrogenase C-terminal domain APA01_RS13705 PF13419 Haloacid dehalogenase-like hydrolase APA01_RS13760 PF01527 Transposase APA01_RS13765 PF13276 HTH-like domain APA01_RS13765 PF00665 Integrase core domain APA01_RS13765 PF13333 Integrase core domain APA01_RS13790 PF13098 Thioredoxin-like domain APA01_RS13810 PF13614 AAA domain APA01_RS13815 PF02195 ParB-like nuclease domain APA01_RS13815 PF17762 HTH domain found in ParB protein APA01_RS13830 PF00216 Bacterial DNA-binding protein APA01_RS13870 PF16925 Tetracyclin repressor-like, C-terminal domain APA01_RS13870 PF00440 Bacterial regulatory proteins, tetR family APA01_RS13875 PF00465 Iron-containing alcohol dehydrogenase APA01_RS13880 PF00171 Aldehyde dehydrogenase family APA01_RS13910 PF03814 Potassium-transporting ATPase A subunit APA01_RS13920 PF02669 K+-transporting ATPase, c chain APA01_RS13925 PF02702 Osmosensitive K+ channel His kinase sensor domain APA01_RS13925 PF00512 His Kinase A (phospho-acceptor) domain APA01_RS13925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APA01_RS13925 PF13492 GAF domain APA01_RS13925 PF13493 Domain of unknown function (DUF4118) APA01_RS13930 PF00486 Transcriptional regulatory protein, C terminal APA01_RS13930 PF00072 Response regulator receiver domain APA01_RS13935 PF00999 Sodium/hydrogen exchanger family APA01_RS13950 PF12833 Helix-turn-helix domain APA01_RS13950 PF02311 AraC-like ligand binding domain APA01_RS13960 PF01757 Acyltransferase family APA01_RS13970 PF02661 Fic/DOC family APA01_RS13980 PF03428 Replication protein C N-terminal domain APA01_RS13980 PF11800 Replication protein C C-terminal region APA01_RS13995 PF03009 Glycerophosphoryl diester phosphodiesterase family APA01_RS14010 PF02537 CrcB-like protein, Camphor Resistance (CrcB) APA01_RS14060 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system APA01_RS14075 PF01609 Transposase DDE domain APA01_RS14080 PF01566 Natural resistance-associated macrophage protein APA01_RS14085 PF02742 Iron dependent repressor, metal binding and dimerisation domain APA01_RS14085 PF01325 Iron dependent repressor, N-terminal DNA binding domain APA01_RS14090 PF00005 ABC transporter APA01_RS14090 PF06472 ABC transporter transmembrane region 2 APA01_RS14095 PF04966 Carbohydrate-selective porin, OprB family APA01_RS14130 PF13340 Putative transposase of IS4/5 family (DUF4096) APA01_RS14145 PF13276 HTH-like domain APA01_RS14145 PF13333 Integrase core domain APA01_RS14145 PF00665 Integrase core domain APA01_RS14150 PF01527 Transposase APA01_RS14155 PF07859 alpha/beta hydrolase fold APA01_RS14175 PF00270 DEAD/DEAH box helicase APA01_RS14175 PF00271 Helicase conserved C-terminal domain APA01_RS14175 PF18019 HD domain APA01_RS14190 PF09344 CT1975-like protein APA01_RS14205 PF01867 CRISPR associated protein Cas1 APA01_RS14210 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) APA01_RS14235 PF13276 HTH-like domain APA01_RS14235 PF13333 Integrase core domain APA01_RS14235 PF00665 Integrase core domain APA01_RS14240 PF01527 Transposase APA01_RS14275 PF13276 HTH-like domain APA01_RS14275 PF00665 Integrase core domain APA01_RS14275 PF13333 Integrase core domain APA01_RS14280 PF01527 Transposase APA01_RS14290 PF04221 RelB antitoxin APA01_RS14295 PF05016 ParE toxin of type II toxin-antitoxin system, parDE APA01_RS14305 PF06100 MCRA family APA01_RS14370 PF00216 Bacterial DNA-binding protein APA01_RS14375 PF00665 Integrase core domain APA01_RS14375 PF13333 Integrase core domain APA01_RS14375 PF13276 HTH-like domain APA01_RS14380 PF01527 Transposase APA01_RS14410 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system APA01_RS14415 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin APA01_RS14440 PF01925 Sulfite exporter TauE/SafE APA01_RS14460 PF13193 AMP-binding enzyme C-terminal domain APA01_RS14460 PF00501 AMP-binding enzyme APA01_RS14460 PF16177 Acetyl-coenzyme A synthetase N-terminus APA01_RS14475 PF00534 Glycosyl transferases group 1 APA01_RS14475 PF13439 Glycosyltransferase Family 4 APA01_RS14480 PF00586 AIR synthase related protein, N-terminal domain APA01_RS14480 PF02769 AIR synthase related protein, C-terminal domain APA01_RS14495 PF00795 Carbon-nitrogen hydrolase APA01_RS14505 PF00155 Aminotransferase class I and II APA01_RS14505 PF00392 Bacterial regulatory proteins, gntR family APA01_RS14515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APA01_RS14515 PF03466 LysR substrate binding domain APA01_RS14520 PF07690 Major Facilitator Superfamily APA01_RS14535 PF13361 UvrD-like helicase C-terminal domain APA01_RS14535 PF00580 UvrD/REP helicase N-terminal domain APA01_RS14540 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain APA01_RS14540 PF13538 UvrD-like helicase C-terminal domain APA01_RS14540 PF14490 Helix-hairpin-helix containing domain APA01_RS14565 PF01527 Transposase APA01_RS14590 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) APA01_RS14590 PF18766 SWI2/SNF2 ATPase APA01_RS14590 PF11867 Domain of unknown function (DUF3387) APA01_RS14600 PF01609 Transposase DDE domain APA01_RS14605 PF01420 Type I restriction modification DNA specificity domain APA01_RS14610 PF01909 Nucleotidyltransferase domain APA01_RS14620 PF02384 N-6 DNA Methylase APA01_RS14625 PF00724 NADH:flavin oxidoreductase / NADH oxidase family APA01_RS14655 PF01546 Peptidase family M20/M25/M40 APA01_RS14655 PF07687 Peptidase dimerisation domain APA01_RS14660 PF00732 GMC oxidoreductase APA01_RS14660 PF05199 GMC oxidoreductase APA01_RS14665 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin APA01_RS14675 PF00171 Aldehyde dehydrogenase family APA01_RS14690 PF01527 Transposase APA01_RS14695 PF13276 HTH-like domain APA01_RS14695 PF00665 Integrase core domain APA01_RS14695 PF13333 Integrase core domain APA01_RS14700 PF00005 ABC transporter APA01_RS14710 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APA01_RS14710 PF00384 Molybdopterin oxidoreductase APA01_RS14710 PF01568 Molydopterin dinucleotide binding domain APA01_RS14715 PF01609 Transposase DDE domain APA01_RS14720 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APA01_RS14720 PF01568 Molydopterin dinucleotide binding domain APA01_RS14720 PF00384 Molybdopterin oxidoreductase APA01_RS14720 PF04324 BFD-like [2Fe-2S] binding domain APA01_RS14725 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain APA01_RS14725 PF18267 Rubredoxin NAD+ reductase C-terminal domain APA01_RS14725 PF13806 Rieske-like [2Fe-2S] domain APA01_RS14725 PF07992 Pyridine nucleotide-disulphide oxidoreductase APA01_RS14725 PF01077 Nitrite and sulphite reductase 4Fe-4S domain APA01_RS14725 PF04324 BFD-like [2Fe-2S] binding domain APA01_RS14730 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain APA01_RS14730 PF07992 Pyridine nucleotide-disulphide oxidoreductase APA01_RS14730 PF13806 Rieske-like [2Fe-2S] domain APA01_RS14730 PF04324 BFD-like [2Fe-2S] binding domain APA01_RS14730 PF01077 Nitrite and sulphite reductase 4Fe-4S domain APA01_RS14730 PF18267 Rubredoxin NAD+ reductase C-terminal domain APA01_RS14750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APA01_RS14750 PF08521 Two-component sensor kinase N-terminal APA01_RS14750 PF00512 His Kinase A (phospho-acceptor) domain APA01_RS14755 PF00072 Response regulator receiver domain APA01_RS14755 PF00486 Transcriptional regulatory protein, C terminal APA01_RS14760 PF00873 AcrB/AcrD/AcrF family APA01_RS14800 PF08267 Cobalamin-independent synthase, N-terminal domain APA01_RS14800 PF01717 Cobalamin-independent synthase, Catalytic domain APA01_RS14805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APA01_RS14805 PF03466 LysR substrate binding domain APA01_RS14810 PF13340 Putative transposase of IS4/5 family (DUF4096) APA01_RS14825 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system APA01_RS14835 PF03358 NADPH-dependent FMN reductase APA01_RS14840 PF02040 Arsenical pump membrane protein APA01_RS14845 PF03960 ArsC family APA01_RS14860 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) APA01_RS14860 PF18766 SWI2/SNF2 ATPase APA01_RS14860 PF11867 Domain of unknown function (DUF3387) APA01_RS14870 PF02384 N-6 DNA Methylase APA01_RS14870 PF12161 HsdM N-terminal domain APA01_RS14880 PF13333 Integrase core domain APA01_RS14880 PF00665 Integrase core domain APA01_RS14880 PF13276 HTH-like domain APA01_RS14885 PF01527 Transposase APA01_RS14895 PF03960 ArsC family APA01_RS14900 PF02040 Arsenical pump membrane protein APA01_RS14905 PF01527 Transposase APA01_RS14910 PF00665 Integrase core domain APA01_RS14910 PF13276 HTH-like domain APA01_RS14910 PF13333 Integrase core domain APA01_RS14920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APA01_RS14920 PF03466 LysR substrate binding domain APA01_RS14945 PF01850 PIN domain APA01_RS14950 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin APA01_RS14955 PF00239 Resolvase, N terminal domain APA01_RS14965 PF01527 Transposase APA01_RS14970 PF13333 Integrase core domain APA01_RS14970 PF00665 Integrase core domain APA01_RS14970 PF13276 HTH-like domain APA01_RS14975 PF02705 K+ potassium transporter APA01_RS14980 PF13333 Integrase core domain APA01_RS14980 PF00665 Integrase core domain APA01_RS14980 PF13276 HTH-like domain APA01_RS14985 PF01527 Transposase APA01_RS14990 PF02705 K+ potassium transporter APA01_RS14995 PF01695 IstB-like ATP binding protein APA01_RS15015 PF13276 HTH-like domain APA01_RS15015 PF00665 Integrase core domain APA01_RS15015 PF13333 Integrase core domain APA01_RS15045 PF00437 Type II/IV secretion system protein APA01_RS15065 PF05016 ParE toxin of type II toxin-antitoxin system, parDE APA01_RS15075 PF01527 Transposase APA01_RS15080 PF13333 Integrase core domain APA01_RS15080 PF00665 Integrase core domain APA01_RS15080 PF13276 HTH-like domain APA01_RS15100 PF00106 short chain dehydrogenase APA01_RS15105 PF01527 Transposase APA01_RS15110 PF13333 Integrase core domain APA01_RS15110 PF00665 Integrase core domain APA01_RS15110 PF13276 HTH-like domain APA01_RS15115 PF13276 HTH-like domain APA01_RS15115 PF13333 Integrase core domain APA01_RS15115 PF00665 Integrase core domain APA01_RS15150 PF00665 Integrase core domain APA01_RS15150 PF13333 Integrase core domain APA01_RS15150 PF13276 HTH-like domain APA01_RS15155 PF01527 Transposase APA01_RS15170 PF02899 Phage integrase, N-terminal SAM-like domain APA01_RS15170 PF00589 Phage integrase family APA01_RS15180 PF00873 AcrB/AcrD/AcrF family APA01_RS15200 PF00376 MerR family regulatory protein APA01_RS15200 PF09278 MerR, DNA binding APA01_RS15215 PF03814 Potassium-transporting ATPase A subunit APA01_RS15225 PF02669 K+-transporting ATPase, c chain APA01_RS15230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APA01_RS15230 PF13492 GAF domain APA01_RS15230 PF02702 Osmosensitive K+ channel His kinase sensor domain APA01_RS15230 PF13493 Domain of unknown function (DUF4118) APA01_RS15230 PF00512 His Kinase A (phospho-acceptor) domain APA01_RS15235 PF00486 Transcriptional regulatory protein, C terminal APA01_RS15235 PF00072 Response regulator receiver domain APA01_RS15245 PF00106 short chain dehydrogenase APA01_RS15270 PF02384 N-6 DNA Methylase APA01_RS15280 PF00589 Phage integrase family APA01_RS15300 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin APA01_RS15305 PF01850 PIN domain APA01_RS15310 PF00665 Integrase core domain APA01_RS15315 PF01695 IstB-like ATP binding protein APA01_RS15320 PF01845 CcdB protein APA01_RS15350 PF00665 Integrase core domain APA01_RS15360 PF02195 ParB-like nuclease domain APA01_RS15360 PF17762 HTH domain found in ParB protein APA01_RS15385 PF13340 Putative transposase of IS4/5 family (DUF4096) APA01_RS15395 PF02899 Phage integrase, N-terminal SAM-like domain APA01_RS15395 PF00589 Phage integrase family APA01_RS15420 PF13276 HTH-like domain APA01_RS15420 PF13333 Integrase core domain APA01_RS15420 PF00665 Integrase core domain APA01_RS15425 PF01527 Transposase APA01_RS15450 PF00239 Resolvase, N terminal domain APA01_RS15450 PF02796 Helix-turn-helix domain of resolvase APA01_RS15470 PF13276 HTH-like domain APA01_RS15470 PF00665 Integrase core domain APA01_RS15470 PF13333 Integrase core domain APA01_RS15475 PF01527 Transposase APA01_RS15490 PF01609 Transposase DDE domain APA01_RS15495 PF00665 Integrase core domain APA01_RS15495 PF13276 HTH-like domain APA01_RS15495 PF13333 Integrase core domain APA01_RS15500 PF01527 Transposase APA01_RS15510 PF02796 Helix-turn-helix domain of resolvase APA01_RS15510 PF00239 Resolvase, N terminal domain APA01_RS15515 PF00665 Integrase core domain APA01_RS15515 PF09299 Mu transposase, C-terminal APA01_RS15520 PF13401 AAA domain APA01_RS15525 PF02796 Helix-turn-helix domain of resolvase APA01_RS15525 PF00239 Resolvase, N terminal domain APA01_RS15540 PF10134 Replication initiator protein A APA01_RS15590 PF17841 BID domain of Bartonella effector protein (Bep) APA01_RS15590 PF01443 Viral (Superfamily 1) RNA helicase APA01_RS15590 PF03389 MobA/MobL family APA01_RS15600 PF01850 PIN domain APA01_RS15615 PF02796 Helix-turn-helix domain of resolvase APA01_RS15615 PF00239 Resolvase, N terminal domain APA01_RS15630 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system APA01_RS15640 PF12146 Serine aminopeptidase, S33 APA01_RS15645 PF00665 Integrase core domain APA01_RS15645 PF13333 Integrase core domain APA01_RS15645 PF13276 HTH-like domain APA01_RS15650 PF01527 Transposase APA01_RS15655 PF10544 T5orf172 domain APA01_RS15670 PF13784 Fic/DOC family N-terminal APA01_RS15670 PF02661 Fic/DOC family APA01_RS15695 PF00239 Resolvase, N terminal domain APA01_RS15695 PF02796 Helix-turn-helix domain of resolvase APA01_RS15715 PF01527 Transposase APA01_RS15720 PF13276 HTH-like domain APA01_RS15720 PF00665 Integrase core domain APA01_RS15720 PF13333 Integrase core domain APA01_RS15725 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system APA01_RS15745 PF03389 MobA/MobL family APA01_RS15795 PF01381 Helix-turn-helix