APA01_RS00045 SM00464 Found in ATP-dependent protease La (LON) APA01_RS00075 SM00932 Scaffold protein Nfu/NifU N terminal APA01_RS00095 SM01209 APA01_RS00095 APA01_RS00095 SM01210 APA01_RS00095 APA01_RS00125 SM00829 Enoylreductase APA01_RS00140 SM01002 Alanine dehydrogenase/PNT, C-terminal domain APA01_RS00140 SM01003 Alanine dehydrogenase/PNT, N-terminal domain APA01_RS00145 SM00859 Semialdehyde dehydrogenase, NAD binding domain APA01_RS00190 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain APA01_RS00195 SM00861 Transketolase, pyrimidine binding domain APA01_RS00220 SM00382 ATPases associated with a variety of cellular activities APA01_RS00260 SM00382 ATPases associated with a variety of cellular activities APA01_RS00270 SM00493 APA01_RS00270 APA01_RS00280 SM00905 Dihydroneopterin aldolase APA01_RS00300 SM00316 Ribosomal protein S1-like RNA-binding domain APA01_RS00335 SM00937 APA01_RS00335 APA01_RS00390 SM00917 LeuA allosteric (dimerisation) domain APA01_RS00410 SM00387 Histidine kinase-like ATPases APA01_RS00410 SM00388 His Kinase A (phosphoacceptor) domain APA01_RS00410 SM00448 cheY-homologous receiver domain APA01_RS00430 SM00986 Uracil DNA glycosylase superfamily APA01_RS00430 SM00987 UreE urease accessory protein, C-terminal domain APA01_RS00440 SM00564 beta-propeller repeat APA01_RS00490 SM00490 helicase superfamily c-terminal domain APA01_RS00500 SM00347 helix_turn_helix multiple antibiotic resistance protein APA01_RS00545 SM00490 helicase superfamily c-terminal domain APA01_RS00565 SM00919 Malic enzyme, NAD binding domain APA01_RS00565 SM01274 APA01_RS00565 APA01_RS00570 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. APA01_RS00570 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. APA01_RS00610 SM00382 ATPases associated with a variety of cellular activities APA01_RS00625 SM00341 Helicase and RNase D C-terminal APA01_RS00625 SM00474 3'-5' exonuclease APA01_RS00650 SM00382 ATPases associated with a variety of cellular activities APA01_RS00690 SM00342 helix_turn_helix, arabinose operon control protein APA01_RS00725 SM00357 Cold shock protein domain APA01_RS00785 SM00421 helix_turn_helix, Lux Regulon APA01_RS00785 SM00448 cheY-homologous receiver domain APA01_RS00790 SM00387 Histidine kinase-like ATPases APA01_RS00790 SM00388 His Kinase A (phosphoacceptor) domain APA01_RS00790 SM00448 cheY-homologous receiver domain APA01_RS00810 SM00382 ATPases associated with a variety of cellular activities APA01_RS00815 SM00382 ATPases associated with a variety of cellular activities APA01_RS00870 SM00331 Sigma factor PP2C-like phosphatases APA01_RS00870 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain APA01_RS00875 SM00220 Serine/Threonine protein kinases, catalytic domain APA01_RS00880 SM00220 Serine/Threonine protein kinases, catalytic domain APA01_RS00950 SM00347 helix_turn_helix multiple antibiotic resistance protein APA01_RS01020 SM00028 Tetratricopeptide repeats APA01_RS01050 SM00867 YceI-like domain APA01_RS01070 SM00382 ATPases associated with a variety of cellular activities APA01_RS01090 SM00271 DnaJ molecular chaperone homology domain APA01_RS01210 SM00487 DEAD-like helicases superfamily APA01_RS01210 SM00490 helicase superfamily c-terminal domain APA01_RS01310 SM01133 APA01_RS01310 APA01_RS01320 SM01040 BRO family, N-terminal domain APA01_RS01415 SM00382 ATPases associated with a variety of cellular activities APA01_RS01415 SM01086 C-terminal, D2-small domain, of ClpB protein APA01_RS01445 SM00387 Histidine kinase-like ATPases APA01_RS01445 SM00388 His Kinase A (phosphoacceptor) domain APA01_RS01450 SM00448 cheY-homologous receiver domain APA01_RS01450 SM00862 Transcriptional regulatory protein, C terminal APA01_RS01465 SM00271 DnaJ molecular chaperone homology domain APA01_RS01485 SM00798 AICARFT/IMPCHase bienzyme APA01_RS01485 SM00851 MGS-like domain APA01_RS01525 SM00530 Helix-turn-helix XRE-family like proteins APA01_RS01550 SM00357 Cold shock protein domain APA01_RS01550 SM00382 ATPases associated with a variety of cellular activities APA01_RS01550 SM00959 Rho termination factor, N-terminal domain APA01_RS01585 SM00382 ATPases associated with a variety of cellular activities APA01_RS01595 SM00788 Adenylosuccinate synthetase APA01_RS01600 SM00448 cheY-homologous receiver domain APA01_RS01600 SM00862 Transcriptional regulatory protein, C terminal APA01_RS01605 SM00387 Histidine kinase-like ATPases APA01_RS01605 SM00388 His Kinase A (phosphoacceptor) domain APA01_RS01635 SM01091 Transporter associated domain APA01_RS01640 SM00829 Enoylreductase APA01_RS01645 SM00382 ATPases associated with a variety of cellular activities APA01_RS01665 SM00822 APA01_RS01665 APA01_RS01670 SM00859 Semialdehyde dehydrogenase, NAD binding domain APA01_RS01785 SM00477 DNA/RNA non-specific endonuclease APA01_RS01785 SM00892 DNA/RNA non-specific endonuclease APA01_RS01800 SM00530 Helix-turn-helix XRE-family like proteins APA01_RS01900 SM00450 Rhodanese Homology Domain APA01_RS01975 SM00729 Elongator protein 3, MiaB family, Radical SAM APA01_RS01990 SM00861 Transketolase, pyrimidine binding domain APA01_RS02005 SM01091 Transporter associated domain APA01_RS02015 SM00986 Uracil DNA glycosylase superfamily APA01_RS02015 SM00987 UreE urease accessory protein, C-terminal domain APA01_RS02020 SM00028 Tetratricopeptide repeats APA01_RS02060 SM00382 ATPases associated with a variety of cellular activities APA01_RS02070 SM01400 APA01_RS02070 APA01_RS02075 SM00855 Phosphoglycerate mutase family APA01_RS02110 SM00822 APA01_RS02110 APA01_RS02145 SM00382 ATPases associated with a variety of cellular activities APA01_RS02195 SM00421 helix_turn_helix, Lux Regulon APA01_RS02340 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain APA01_RS02455 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. APA01_RS02470 SM00974 APA01_RS02470 APA01_RS02545 SM00530 Helix-turn-helix XRE-family like proteins APA01_RS02575 SM00857 Resolvase, N terminal domain APA01_RS02585 SM00729 Elongator protein 3, MiaB family, Radical SAM APA01_RS02620 SM00450 Rhodanese Homology Domain APA01_RS02790 SM00822 APA01_RS02790 APA01_RS02845 SM00882 Coenzyme A transferase APA01_RS02900 SM00893 Electron transfer flavoprotein domain APA01_RS02930 SM00893 Electron transfer flavoprotein domain APA01_RS03005 SM00861 Transketolase, pyrimidine binding domain APA01_RS03035 SM00320 WD40 repeats APA01_RS03040 SM00833 Cobalamin synthesis protein cobW C-terminal domain APA01_RS03165 SM01329 APA01_RS03165 APA01_RS03190 SM00938 Nitrogen regulatory protein P-II APA01_RS03195 SM01230 APA01_RS03195 APA01_RS03205 SM00564 beta-propeller repeat APA01_RS03220 SM00838 Elongation factor G C-terminus APA01_RS03235 SM00487 DEAD-like helicases superfamily APA01_RS03235 SM00490 helicase superfamily c-terminal domain APA01_RS03245 SM00947 Carbonic anhydrase APA01_RS03260 SM01409 APA01_RS03260 APA01_RS03265 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. APA01_RS03265 SM00954 Region found in RelA / SpoT proteins APA01_RS03280 SM00358 Double-stranded RNA binding motif APA01_RS03280 SM00535 Ribonuclease III family APA01_RS03315 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APA01_RS03325 SM00935 Outer membrane protein (OmpH-like) APA01_RS03440 SM00382 ATPases associated with a variety of cellular activities APA01_RS03455 SM00116 Domain in cystathionine beta-synthase and other proteins. APA01_RS03460 SM00474 3'-5' exonuclease APA01_RS03465 SM00967 RNA 2'-O ribose methyltransferase substrate binding APA01_RS03480 SM00072 Guanylate kinase homologues. APA01_RS03510 SM00382 ATPases associated with a variety of cellular activities APA01_RS03525 SM00382 ATPases associated with a variety of cellular activities APA01_RS03565 SM00345 helix_turn_helix gluconate operon transcriptional repressor APA01_RS03565 SM00895 APA01_RS03565 APA01_RS03655 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APA01_RS03660 SM00487 DEAD-like helicases superfamily APA01_RS03660 SM00490 helicase superfamily c-terminal domain APA01_RS03660 SM00847 Helicase associated domain (HA2) Add an annotation APA01_RS03705 SM01007 Class II Aldolase and Adducin N-terminal domain APA01_RS03720 SM00904 Riboflavin kinase APA01_RS03740 SM00853 MutL C terminal dimerisation domain APA01_RS03740 SM01340 APA01_RS03740 APA01_RS03755 SM00387 Histidine kinase-like ATPases APA01_RS03755 SM00433 TopoisomeraseII APA01_RS03790 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APA01_RS03790 SM00245 tail specific protease APA01_RS03795 SM00955 APA01_RS03795 APA01_RS03800 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain APA01_RS03800 SM00437 Bacterial DNA topoisomerase I DNA-binding domain APA01_RS03800 SM00493 APA01_RS03800 APA01_RS03830 SM01207 APA01_RS03830 APA01_RS03865 SM00861 Transketolase, pyrimidine binding domain APA01_RS03890 SM00996 S-adenosyl-L-homocysteine hydrolase APA01_RS03890 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain APA01_RS03895 SM00563 Phosphate acyltransferases APA01_RS03905 SM00849 Metallo-beta-lactamase superfamily APA01_RS03955 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain APA01_RS03990 SM00852 Probable molybdopterin binding domain APA01_RS04040 SM00978 APA01_RS04040 APA01_RS04050 SM01235 APA01_RS04050 APA01_RS04055 SM00463 Small MutS-related domain APA01_RS04160 SM00857 Resolvase, N terminal domain APA01_RS04235 SM00954 Region found in RelA / SpoT proteins APA01_RS04310 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains APA01_RS04355 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APA01_RS04360 SM00829 Enoylreductase APA01_RS04410 SM00479 APA01_RS04410 APA01_RS04465 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain APA01_RS04635 SM00448 cheY-homologous receiver domain APA01_RS04635 SM00862 Transcriptional regulatory protein, C terminal APA01_RS04640 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APA01_RS04640 SM00387 Histidine kinase-like ATPases APA01_RS04640 SM00388 His Kinase A (phosphoacceptor) domain APA01_RS04660 SM00649 Ribosomal protein L11/L12 APA01_RS04685 SM00663 RNA polymerase I subunit A N-terminus APA01_RS04705 SM01403 APA01_RS04705 APA01_RS04725 SM01382 APA01_RS04725 APA01_RS04725 SM01383 APA01_RS04725 APA01_RS04740 SM00322 K homology RNA-binding domain APA01_RS04760 SM01374 APA01_RS04760 APA01_RS04765 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. APA01_RS04830 SM00662 RNA polymerases D APA01_RS04850 SM00382 ATPases associated with a variety of cellular activities APA01_RS04925 SM00382 ATPases associated with a variety of cellular activities APA01_RS04940 SM00382 ATPases associated with a variety of cellular activities APA01_RS04965 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APA01_RS04965 SM00245 tail specific protease APA01_RS04990 SM00851 MGS-like domain APA01_RS04990 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain APA01_RS04995 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain APA01_RS05005 SM00400 zinc finger APA01_RS05005 SM00493 APA01_RS05005 APA01_RS05040 SM00650 Ribosomal RNA adenine dimethylases APA01_RS05070 SM00382 ATPases associated with a variety of cellular activities APA01_RS05075 SM00345 helix_turn_helix gluconate operon transcriptional repressor APA01_RS05075 SM00895 APA01_RS05075 APA01_RS05115 SM00028 Tetratricopeptide repeats APA01_RS05120 SM01058 CarD-like/TRCF domain APA01_RS05145 SM00382 ATPases associated with a variety of cellular activities APA01_RS05160 SM00387 Histidine kinase-like ATPases APA01_RS05160 SM00388 His Kinase A (phosphoacceptor) domain APA01_RS05165 SM00091 PAS domain APA01_RS05165 SM00387 Histidine kinase-like ATPases APA01_RS05165 SM00388 His Kinase A (phosphoacceptor) domain APA01_RS05165 SM00448 cheY-homologous receiver domain APA01_RS05175 SM00382 ATPases associated with a variety of cellular activities APA01_RS05175 SM01086 C-terminal, D2-small domain, of ClpB protein APA01_RS05185 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain APA01_RS05220 SM00873 B3/4 domain APA01_RS05220 SM00874 tRNA synthetase B5 domain APA01_RS05220 SM00896 Ferredoxin-fold anticodon binding domain APA01_RS05240 SM00100 Cyclic nucleotide-monophosphate binding domain APA01_RS05250 SM00363 S4 RNA-binding domain APA01_RS05250 SM01390 APA01_RS05250 APA01_RS05265 SM01329 APA01_RS05265 APA01_RS05300 SM01001 AIR carboxylase APA01_RS05400 SM00855 Phosphoglycerate mutase family APA01_RS05405 SM00830 Chorismate mutase type II APA01_RS05425 SM00968 SMC proteins Flexible Hinge Domain APA01_RS05435 SM00116 Domain in cystathionine beta-synthase and other proteins. APA01_RS05435 SM01091 Transporter associated domain APA01_RS05450 SM00729 Elongator protein 3, MiaB family, Radical SAM APA01_RS05455 SM00563 Phosphate acyltransferases APA01_RS05480 SM00278 Helix-hairpin-helix DNA-binding motif class 1 APA01_RS05480 SM00465 GIY-YIG type nucleases (URI domain) APA01_RS05530 SM00852 Probable molybdopterin binding domain APA01_RS05545 SM01192 APA01_RS05545 APA01_RS05545 SM01193 APA01_RS05545 APA01_RS05575 SM00487 DEAD-like helicases superfamily APA01_RS05575 SM00490 helicase superfamily c-terminal domain APA01_RS05585 SM00487 DEAD-like helicases superfamily APA01_RS05585 SM00490 helicase superfamily c-terminal domain APA01_RS05585 SM00982 APA01_RS05585 APA01_RS05585 SM01058 CarD-like/TRCF domain APA01_RS05610 SM00327 von Willebrand factor (vWF) type A domain APA01_RS05620 SM00271 DnaJ molecular chaperone homology domain APA01_RS05655 SM00729 Elongator protein 3, MiaB family, Radical SAM APA01_RS05705 SM00530 Helix-turn-helix XRE-family like proteins APA01_RS05720 SM00937 APA01_RS05720 APA01_RS05780 SM00936 Penicillin-binding protein 5, C-terminal domain APA01_RS05805 SM00849 Metallo-beta-lactamase superfamily APA01_RS05855 SM00729 Elongator protein 3, MiaB family, Radical SAM APA01_RS05855 SM00876 Biotin and Thiamin Synthesis associated domain APA01_RS05925 SM00825 Beta-ketoacyl synthase APA01_RS05935 SM00822 APA01_RS05935 APA01_RS05940 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. APA01_RS05965 SM00857 Resolvase, N terminal domain APA01_RS05985 SM00357 Cold shock protein domain APA01_RS05995 SM01130 APA01_RS05995 APA01_RS06025 SM00382 ATPases associated with a variety of cellular activities APA01_RS06035 SM00450 Rhodanese Homology Domain APA01_RS06050 SM00155 Phospholipase D. Active site motifs. APA01_RS06080 SM01211 APA01_RS06080 APA01_RS06100 SM00998 Adenylosuccinate lyase C-terminus APA01_RS06135 SM00729 Elongator protein 3, MiaB family, Radical SAM APA01_RS06150 SM00861 Transketolase, pyrimidine binding domain APA01_RS06210 SM00387 Histidine kinase-like ATPases APA01_RS06210 SM00433 TopoisomeraseII APA01_RS06220 SM00480 DNA polymerase III beta subunit APA01_RS06225 SM00382 ATPases associated with a variety of cellular activities APA01_RS06225 SM00760 Bacterial dnaA protein helix-turn-helix domain APA01_RS06235 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain APA01_RS06235 SM01232 APA01_RS06235 APA01_RS06260 SM00382 ATPases associated with a variety of cellular activities APA01_RS06310 SM00822 APA01_RS06310 APA01_RS06355 SM00420 helix_turn_helix, Deoxyribose operon repressor APA01_RS06355 SM01134 APA01_RS06355 APA01_RS06360 SM00341 Helicase and RNase D C-terminal APA01_RS06360 SM00487 DEAD-like helicases superfamily APA01_RS06360 SM00490 helicase superfamily c-terminal domain APA01_RS06360 SM00956 APA01_RS06360 APA01_RS06370 SM00382 ATPases associated with a variety of cellular activities APA01_RS06375 SM00382 ATPases associated with a variety of cellular activities APA01_RS06380 SM00387 Histidine kinase-like ATPases APA01_RS06400 SM00448 cheY-homologous receiver domain APA01_RS06405 SM00382 ATPases associated with a variety of cellular activities APA01_RS06415 SM00829 Enoylreductase APA01_RS06455 SM00382 ATPases associated with a variety of cellular activities APA01_RS06510 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain APA01_RS06515 SM01092 CO dehydrogenase flavoprotein C-terminal domain APA01_RS06590 SM00382 ATPases associated with a variety of cellular activities APA01_RS06660 SM01060 APA01_RS06660 APA01_RS06715 SM00382 ATPases associated with a variety of cellular activities APA01_RS06795 SM00342 helix_turn_helix, arabinose operon control protein APA01_RS06865 SM00965 Secretin and TonB N terminus short domain APA01_RS06880 SM00965 Secretin and TonB N terminus short domain APA01_RS06900 SM00062 Bacterial periplasmic substrate-binding proteins APA01_RS06905 SM00382 ATPases associated with a variety of cellular activities APA01_RS07040 SM00382 ATPases associated with a variety of cellular activities APA01_RS07060 SM00796 Allophanate hydrolase subunit 1 APA01_RS07060 SM00797 Allophanate hydrolase subunit 2 APA01_RS07060 SM00878 Biotin carboxylase C-terminal domain APA01_RS07140 SM00903 Flavin reductase like domain APA01_RS07210 SM00487 DEAD-like helicases superfamily APA01_RS07370 SM00886 Stress responsive A/B Barrel Domain APA01_RS07395 SM00564 beta-propeller repeat APA01_RS07450 SM00890 Domain of unknown function APA01_RS07495 SM00852 Probable molybdopterin binding domain APA01_RS07555 SM00861 Transketolase, pyrimidine binding domain APA01_RS07560 SM00363 S4 RNA-binding domain APA01_RS07605 SM00448 cheY-homologous receiver domain APA01_RS07605 SM00862 Transcriptional regulatory protein, C terminal APA01_RS07625 SM00116 Domain in cystathionine beta-synthase and other proteins. APA01_RS07625 SM01240 APA01_RS07625 APA01_RS07645 SM00382 ATPases associated with a variety of cellular activities APA01_RS07650 SM00382 ATPases associated with a variety of cellular activities APA01_RS07660 SM00014 Acid phosphatase homologues APA01_RS07740 SM00729 Elongator protein 3, MiaB family, Radical SAM APA01_RS07785 SM00382 ATPases associated with a variety of cellular activities APA01_RS07790 SM00382 ATPases associated with a variety of cellular activities APA01_RS07800 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. APA01_RS07810 SM00671 Sel1-like repeats. APA01_RS07825 SM00870 APA01_RS07825 APA01_RS07870 SM00382 ATPases associated with a variety of cellular activities APA01_RS07900 SM00829 Enoylreductase APA01_RS08000 SM01266 APA01_RS08000 APA01_RS08045 SM00387 Histidine kinase-like ATPases APA01_RS08045 SM00388 His Kinase A (phosphoacceptor) domain APA01_RS08050 SM00448 cheY-homologous receiver domain APA01_RS08050 SM00862 Transcriptional regulatory protein, C terminal APA01_RS08225 SM00346 helix_turn_helix isocitrate lyase regulation APA01_RS08235 SM00382 ATPases associated with a variety of cellular activities APA01_RS08250 SM00849 Metallo-beta-lactamase superfamily APA01_RS08295 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region APA01_RS08300 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region APA01_RS08345 SM00411 bacterial (prokaryotic) histone like domain APA01_RS08350 SM00382 ATPases associated with a variety of cellular activities APA01_RS08350 SM00464 Found in ATP-dependent protease La (LON) APA01_RS08355 SM00382 ATPases associated with a variety of cellular activities APA01_RS08355 SM00994 ClpX C4-type zinc finger APA01_RS08355 SM01086 C-terminal, D2-small domain, of ClpB protein APA01_RS08390 SM00487 DEAD-like helicases superfamily APA01_RS08390 SM00490 helicase superfamily c-terminal domain APA01_RS08425 SM00382 ATPases associated with a variety of cellular activities APA01_RS08455 SM00838 Elongation factor G C-terminus APA01_RS08455 SM00889 Elongation factor G, domain IV APA01_RS08470 SM00382 ATPases associated with a variety of cellular activities APA01_RS08480 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. APA01_RS08485 SM00533 DNA-binding domain of DNA mismatch repair MUTS family APA01_RS08485 SM00534 ATPase domain of DNA mismatch repair MUTS family APA01_RS08490 SM00028 Tetratricopeptide repeats APA01_RS08520 SM00978 APA01_RS08520 APA01_RS08560 SM00344 helix_turn_helix ASNC type APA01_RS08580 SM00411 bacterial (prokaryotic) histone like domain APA01_RS08585 SM00986 Uracil DNA glycosylase superfamily APA01_RS08585 SM00987 UreE urease accessory protein, C-terminal domain APA01_RS08605 SM00422 helix_turn_helix, mercury resistance APA01_RS08610 SM00411 bacterial (prokaryotic) histone like domain APA01_RS08640 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APA01_RS08640 SM00387 Histidine kinase-like ATPases APA01_RS08640 SM00388 His Kinase A (phosphoacceptor) domain APA01_RS08645 SM00448 cheY-homologous receiver domain APA01_RS08645 SM00862 Transcriptional regulatory protein, C terminal APA01_RS08650 SM00347 helix_turn_helix multiple antibiotic resistance protein APA01_RS08670 SM01329 APA01_RS08670 APA01_RS08705 SM00382 ATPases associated with a variety of cellular activities APA01_RS08705 SM00962 SRP54-type protein, GTPase domain APA01_RS08705 SM00963 SRP54-type protein, helical bundle domain APA01_RS08725 SM00363 S4 RNA-binding domain APA01_RS08730 SM00382 ATPases associated with a variety of cellular activities APA01_RS08760 SM00382 ATPases associated with a variety of cellular activities APA01_RS08765 SM00564 beta-propeller repeat APA01_RS08835 SM00382 ATPases associated with a variety of cellular activities APA01_RS08835 SM01086 C-terminal, D2-small domain, of ClpB protein APA01_RS08855 SM00382 ATPases associated with a variety of cellular activities APA01_RS08855 SM00448 cheY-homologous receiver domain APA01_RS08860 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APA01_RS08860 SM00387 Histidine kinase-like ATPases APA01_RS08860 SM00388 His Kinase A (phosphoacceptor) domain APA01_RS08865 SM00382 ATPases associated with a variety of cellular activities APA01_RS08865 SM00448 cheY-homologous receiver domain APA01_RS08870 SM00091 PAS domain APA01_RS08870 SM00387 Histidine kinase-like ATPases APA01_RS08870 SM00388 His Kinase A (phosphoacceptor) domain APA01_RS08950 SM00984 UDP binding domain APA01_RS08960 SM00938 Nitrogen regulatory protein P-II APA01_RS08965 SM00971 Serine acetyltransferase, N-terminal APA01_RS09025 SM00841 Elongation factor P, C-terminal APA01_RS09025 SM01185 APA01_RS09025 APA01_RS09035 SM00491 APA01_RS09035 APA01_RS09040 SM00357 Cold shock protein domain APA01_RS09050 SM00883 Chaperonin 10 Kd subunit APA01_RS09250 SM00607 eel-Fucolectin Tachylectin-4 Pentaxrin-1 Domain APA01_RS09280 SM00487 DEAD-like helicases superfamily APA01_RS09280 SM00490 helicase superfamily c-terminal domain APA01_RS09285 SM01323 APA01_RS09285 APA01_RS09335 SM00852 Probable molybdopterin binding domain APA01_RS09500 SM00487 DEAD-like helicases superfamily APA01_RS09500 SM00490 helicase superfamily c-terminal domain APA01_RS09565 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase APA01_RS09670 SM00842 Cell division protein FtsA APA01_RS09675 SM00864 Tubulin/FtsZ family, GTPase domain APA01_RS09675 SM00865 Tubulin/FtsZ family, C-terminal domain APA01_RS09695 SM00292 breast cancer carboxy-terminal domain APA01_RS09695 SM00532 Ligase N family APA01_RS09815 SM00487 DEAD-like helicases superfamily APA01_RS09815 SM00490 helicase superfamily c-terminal domain APA01_RS09845 SM01004 Delta-aminolevulinic acid dehydratase APA01_RS09855 SM00434 DNA Topoisomerase IV APA01_RS09900 SM00481 DNA polymerase alpha chain like domain APA01_RS09940 SM00507 HNH nucleases APA01_RS09960 SM00729 Elongator protein 3, MiaB family, Radical SAM APA01_RS09965 SM00562 APA01_RS09965 APA01_RS09970 SM00382 ATPases associated with a variety of cellular activities APA01_RS09980 SM00448 cheY-homologous receiver domain APA01_RS09980 SM00862 Transcriptional regulatory protein, C terminal APA01_RS09985 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APA01_RS09985 SM00387 Histidine kinase-like ATPases APA01_RS10000 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain APA01_RS10010 SM00028 Tetratricopeptide repeats APA01_RS10090 SM00646 APA01_RS10090 APA01_RS10095 SM00316 Ribosomal protein S1-like RNA-binding domain APA01_RS10110 SM00316 Ribosomal protein S1-like RNA-binding domain APA01_RS10245 SM00507 HNH nucleases APA01_RS10290 SM01040 BRO family, N-terminal domain APA01_RS10325 SM00479 APA01_RS10325 APA01_RS10415 SM00460 Transglutaminase/protease-like homologues APA01_RS10525 SM00797 Allophanate hydrolase subunit 2 APA01_RS10530 SM00796 Allophanate hydrolase subunit 1 APA01_RS10545 SM00878 Biotin carboxylase C-terminal domain APA01_RS10575 SM00642 Alpha-amylase domain APA01_RS10580 SM00642 Alpha-amylase domain APA01_RS10585 SM00642 Alpha-amylase domain APA01_RS10595 SM00642 Alpha-amylase domain APA01_RS10765 SM00836 DALR anticodon binding domain APA01_RS10765 SM01016 Arginyl tRNA synthetase N terminal dom APA01_RS10770 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. APA01_RS10815 SM00729 Elongator protein 3, MiaB family, Radical SAM APA01_RS10860 SM00363 S4 RNA-binding domain APA01_RS10870 SM00382 ATPases associated with a variety of cellular activities APA01_RS10890 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs APA01_RS10890 SM00474 3'-5' exonuclease APA01_RS10890 SM00475 5'-3' exonuclease APA01_RS10890 SM00482 DNA polymerase A domain APA01_RS10900 SM00563 Phosphate acyltransferases APA01_RS10950 SM00564 beta-propeller repeat APA01_RS10970 SM00345 helix_turn_helix gluconate operon transcriptional repressor APA01_RS11010 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. APA01_RS11040 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family APA01_RS11120 SM00530 Helix-turn-helix XRE-family like proteins APA01_RS11135 SM00382 ATPases associated with a variety of cellular activities APA01_RS11165 SM00347 helix_turn_helix multiple antibiotic resistance protein APA01_RS11175 SM00903 Flavin reductase like domain APA01_RS11180 SM01007 Class II Aldolase and Adducin N-terminal domain APA01_RS11195 SM00822 APA01_RS11195 APA01_RS11230 SM00564 beta-propeller repeat APA01_RS11280 SM00382 ATPases associated with a variety of cellular activities APA01_RS11305 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. APA01_RS11315 SM00671 Sel1-like repeats. APA01_RS11430 SM00855 Phosphoglycerate mutase family APA01_RS11445 SM00833 Cobalamin synthesis protein cobW C-terminal domain APA01_RS11460 SM00347 helix_turn_helix multiple antibiotic resistance protein APA01_RS11480 SM00903 Flavin reductase like domain APA01_RS11490 SM00382 ATPases associated with a variety of cellular activities APA01_RS11555 SM00857 Resolvase, N terminal domain APA01_RS11710 SM00382 ATPases associated with a variety of cellular activities APA01_RS11735 SM00248 ankyrin repeats APA01_RS11740 SM00861 Transketolase, pyrimidine binding domain APA01_RS11750 SM01350 APA01_RS11750 APA01_RS11795 SM00829 Enoylreductase APA01_RS11810 SM00729 Elongator protein 3, MiaB family, Radical SAM APA01_RS11830 SM00382 ATPases associated with a variety of cellular activities APA01_RS11855 SM00387 Histidine kinase-like ATPases APA01_RS11855 SM00388 His Kinase A (phosphoacceptor) domain APA01_RS11855 SM00448 cheY-homologous receiver domain APA01_RS11860 SM00421 helix_turn_helix, Lux Regulon APA01_RS11860 SM00448 cheY-homologous receiver domain APA01_RS11910 SM00988 UreE urease accessory protein, N-terminal domain APA01_RS11980 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APA01_RS11990 SM00849 Metallo-beta-lactamase superfamily APA01_RS12080 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain APA01_RS12095 SM00347 helix_turn_helix multiple antibiotic resistance protein APA01_RS12115 SM00382 ATPases associated with a variety of cellular activities APA01_RS12165 SM00857 Resolvase, N terminal domain APA01_RS12170 SM00530 Helix-turn-helix XRE-family like proteins APA01_RS12285 SM00849 Metallo-beta-lactamase superfamily APA01_RS12365 SM00434 DNA Topoisomerase IV APA01_RS12380 SM00316 Ribosomal protein S1-like RNA-binding domain APA01_RS12380 SM00322 K homology RNA-binding domain APA01_RS12385 SM01387 APA01_RS12385 APA01_RS12400 SM00382 ATPases associated with a variety of cellular activities APA01_RS12440 SM00671 Sel1-like repeats. APA01_RS12450 SM00382 ATPases associated with a variety of cellular activities APA01_RS12460 SM01018 B12 binding domain APA01_RS12535 SM00382 ATPases associated with a variety of cellular activities APA01_RS12535 SM00962 SRP54-type protein, GTPase domain APA01_RS12535 SM00963 SRP54-type protein, helical bundle domain APA01_RS12540 SM00729 Elongator protein 3, MiaB family, Radical SAM APA01_RS12560 SM00487 DEAD-like helicases superfamily APA01_RS12560 SM00490 helicase superfamily c-terminal domain APA01_RS12600 SM00382 ATPases associated with a variety of cellular activities APA01_RS12625 SM00829 Enoylreductase APA01_RS12635 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APA01_RS12695 SM01005 Alanine racemase, C-terminal domain APA01_RS12700 SM00344 helix_turn_helix ASNC type APA01_RS12720 SM00316 Ribosomal protein S1-like RNA-binding domain APA01_RS12720 SM00322 K homology RNA-binding domain APA01_RS12735 SM00382 ATPases associated with a variety of cellular activities APA01_RS12750 SM00062 Bacterial periplasmic substrate-binding proteins APA01_RS12750 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. APA01_RS12755 SM00382 ATPases associated with a variety of cellular activities APA01_RS12765 SM00382 ATPases associated with a variety of cellular activities APA01_RS12805 SM00878 Biotin carboxylase C-terminal domain APA01_RS12875 SM00732 Likely ribonuclease with RNase H fold. APA01_RS12890 SM00845 GatB domain APA01_RS12900 SM00382 ATPases associated with a variety of cellular activities APA01_RS12905 SM00478 endonuclease III APA01_RS12915 SM00478 endonuclease III APA01_RS12995 SM00893 Electron transfer flavoprotein domain APA01_RS13000 SM00893 Electron transfer flavoprotein domain APA01_RS13015 SM00729 Elongator protein 3, MiaB family, Radical SAM APA01_RS13025 SM00100 Cyclic nucleotide-monophosphate binding domain APA01_RS13025 SM00419 helix_turn_helix, cAMP Regulatory protein APA01_RS13030 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APA01_RS13045 SM00363 S4 RNA-binding domain APA01_RS13085 SM00857 Resolvase, N terminal domain APA01_RS13135 SM00855 Phosphoglycerate mutase family APA01_RS13170 SM00382 ATPases associated with a variety of cellular activities APA01_RS13170 SM00843 APA01_RS13170 APA01_RS13220 SM00840 APA01_RS13220 APA01_RS13260 SM00448 cheY-homologous receiver domain APA01_RS13260 SM00862 Transcriptional regulatory protein, C terminal APA01_RS13275 SM00382 ATPases associated with a variety of cellular activities APA01_RS13320 SM00382 ATPases associated with a variety of cellular activities APA01_RS13325 SM00278 Helix-hairpin-helix DNA-binding motif class 1 APA01_RS13340 SM00957 SecA DEAD-like domain APA01_RS13340 SM00958 SecA preprotein cross-linking domain APA01_RS13375 SM00271 DnaJ molecular chaperone homology domain APA01_RS13410 SM00411 bacterial (prokaryotic) histone like domain APA01_RS13505 SM00470 ParB-like nuclease domain APA01_RS13520 SM01228 APA01_RS13520 APA01_RS13625 SM00857 Resolvase, N terminal domain APA01_RS13630 SM00885 D5 N terminal like APA01_RS13635 SM00943 Bifunctional DNA primase/polymerase, N-terminal APA01_RS15040 SM00564 beta-propeller repeat APA01_RS15395 SM00387 Histidine kinase-like ATPases APA01_RS15395 SM00388 His Kinase A (phosphoacceptor) domain APA01_RS15395 SM00448 cheY-homologous receiver domain APA01_RS15615 SM01002 Alanine dehydrogenase/PNT, C-terminal domain APA01_RS15795 SM00530 Helix-turn-helix XRE-family like proteins