APA03_RS00045 SM00464 Found in ATP-dependent protease La (LON) APA03_RS00075 SM00932 Scaffold protein Nfu/NifU N terminal APA03_RS00095 SM01209 APA03_RS00095 APA03_RS00095 SM01210 APA03_RS00095 APA03_RS00125 SM00829 Enoylreductase APA03_RS00140 SM01002 Alanine dehydrogenase/PNT, C-terminal domain APA03_RS00140 SM01003 Alanine dehydrogenase/PNT, N-terminal domain APA03_RS00145 SM00859 Semialdehyde dehydrogenase, NAD binding domain APA03_RS00185 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain APA03_RS00190 SM00861 Transketolase, pyrimidine binding domain APA03_RS00215 SM00382 ATPases associated with a variety of cellular activities APA03_RS00255 SM00382 ATPases associated with a variety of cellular activities APA03_RS00265 SM00493 APA03_RS00265 APA03_RS00275 SM00905 Dihydroneopterin aldolase APA03_RS00295 SM00316 Ribosomal protein S1-like RNA-binding domain APA03_RS00330 SM00937 APA03_RS00330 APA03_RS00385 SM00917 LeuA allosteric (dimerisation) domain APA03_RS00405 SM00387 Histidine kinase-like ATPases APA03_RS00405 SM00388 His Kinase A (phosphoacceptor) domain APA03_RS00405 SM00448 cheY-homologous receiver domain APA03_RS00425 SM00986 Uracil DNA glycosylase superfamily APA03_RS00425 SM00987 UreE urease accessory protein, C-terminal domain APA03_RS00435 SM00564 beta-propeller repeat APA03_RS00485 SM00490 helicase superfamily c-terminal domain APA03_RS00495 SM00347 helix_turn_helix multiple antibiotic resistance protein APA03_RS00540 SM00490 helicase superfamily c-terminal domain APA03_RS00560 SM00919 Malic enzyme, NAD binding domain APA03_RS00560 SM01274 APA03_RS00560 APA03_RS00565 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. APA03_RS00565 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. APA03_RS00605 SM00382 ATPases associated with a variety of cellular activities APA03_RS00620 SM00341 Helicase and RNase D C-terminal APA03_RS00620 SM00474 3'-5' exonuclease APA03_RS00645 SM00382 ATPases associated with a variety of cellular activities APA03_RS00685 SM00342 helix_turn_helix, arabinose operon control protein APA03_RS00720 SM00357 Cold shock protein domain APA03_RS00780 SM00421 helix_turn_helix, Lux Regulon APA03_RS00780 SM00448 cheY-homologous receiver domain APA03_RS00785 SM00387 Histidine kinase-like ATPases APA03_RS00785 SM00388 His Kinase A (phosphoacceptor) domain APA03_RS00785 SM00448 cheY-homologous receiver domain APA03_RS00805 SM00382 ATPases associated with a variety of cellular activities APA03_RS00810 SM00382 ATPases associated with a variety of cellular activities APA03_RS00870 SM00331 Sigma factor PP2C-like phosphatases APA03_RS00870 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain APA03_RS00875 SM00220 Serine/Threonine protein kinases, catalytic domain APA03_RS00880 SM00220 Serine/Threonine protein kinases, catalytic domain APA03_RS00950 SM00347 helix_turn_helix multiple antibiotic resistance protein APA03_RS01020 SM00028 Tetratricopeptide repeats APA03_RS01050 SM00867 YceI-like domain APA03_RS01070 SM00382 ATPases associated with a variety of cellular activities APA03_RS01090 SM00271 DnaJ molecular chaperone homology domain APA03_RS01210 SM00487 DEAD-like helicases superfamily APA03_RS01210 SM00490 helicase superfamily c-terminal domain APA03_RS01310 SM01133 APA03_RS01310 APA03_RS01320 SM01040 BRO family, N-terminal domain APA03_RS01415 SM00382 ATPases associated with a variety of cellular activities APA03_RS01415 SM01086 C-terminal, D2-small domain, of ClpB protein APA03_RS01445 SM00387 Histidine kinase-like ATPases APA03_RS01445 SM00388 His Kinase A (phosphoacceptor) domain APA03_RS01450 SM00448 cheY-homologous receiver domain APA03_RS01450 SM00862 Transcriptional regulatory protein, C terminal APA03_RS01465 SM00271 DnaJ molecular chaperone homology domain APA03_RS01485 SM00798 AICARFT/IMPCHase bienzyme APA03_RS01485 SM00851 MGS-like domain APA03_RS01520 SM00530 Helix-turn-helix XRE-family like proteins APA03_RS01545 SM00357 Cold shock protein domain APA03_RS01545 SM00382 ATPases associated with a variety of cellular activities APA03_RS01545 SM00959 Rho termination factor, N-terminal domain APA03_RS01580 SM00382 ATPases associated with a variety of cellular activities APA03_RS01590 SM00788 Adenylosuccinate synthetase APA03_RS01595 SM00448 cheY-homologous receiver domain APA03_RS01595 SM00862 Transcriptional regulatory protein, C terminal APA03_RS01600 SM00387 Histidine kinase-like ATPases APA03_RS01600 SM00388 His Kinase A (phosphoacceptor) domain APA03_RS01630 SM01091 Transporter associated domain APA03_RS01635 SM00829 Enoylreductase APA03_RS01640 SM00382 ATPases associated with a variety of cellular activities APA03_RS01660 SM00822 APA03_RS01660 APA03_RS01665 SM00859 Semialdehyde dehydrogenase, NAD binding domain APA03_RS01780 SM00477 DNA/RNA non-specific endonuclease APA03_RS01780 SM00892 DNA/RNA non-specific endonuclease APA03_RS01795 SM00530 Helix-turn-helix XRE-family like proteins APA03_RS01895 SM00450 Rhodanese Homology Domain APA03_RS01970 SM00729 Elongator protein 3, MiaB family, Radical SAM APA03_RS01985 SM00861 Transketolase, pyrimidine binding domain APA03_RS01995 SM01091 Transporter associated domain APA03_RS02005 SM00986 Uracil DNA glycosylase superfamily APA03_RS02005 SM00987 UreE urease accessory protein, C-terminal domain APA03_RS02010 SM00028 Tetratricopeptide repeats APA03_RS02050 SM00382 ATPases associated with a variety of cellular activities APA03_RS02060 SM01400 APA03_RS02060 APA03_RS02065 SM00855 Phosphoglycerate mutase family APA03_RS02100 SM00822 APA03_RS02100 APA03_RS02135 SM00382 ATPases associated with a variety of cellular activities APA03_RS02185 SM00421 helix_turn_helix, Lux Regulon APA03_RS02330 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain APA03_RS02445 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. APA03_RS02460 SM00974 APA03_RS02460 APA03_RS02535 SM00530 Helix-turn-helix XRE-family like proteins APA03_RS02565 SM00857 Resolvase, N terminal domain APA03_RS02575 SM00729 Elongator protein 3, MiaB family, Radical SAM APA03_RS02610 SM00450 Rhodanese Homology Domain APA03_RS02780 SM00822 APA03_RS02780 APA03_RS02835 SM00882 Coenzyme A transferase APA03_RS02890 SM00893 Electron transfer flavoprotein domain APA03_RS02920 SM00893 Electron transfer flavoprotein domain APA03_RS02995 SM00861 Transketolase, pyrimidine binding domain APA03_RS03025 SM00320 WD40 repeats APA03_RS03030 SM00833 Cobalamin synthesis protein cobW C-terminal domain APA03_RS03150 SM01329 APA03_RS03150 APA03_RS03175 SM00938 Nitrogen regulatory protein P-II APA03_RS03180 SM01230 APA03_RS03180 APA03_RS03190 SM00564 beta-propeller repeat APA03_RS03205 SM00838 Elongation factor G C-terminus APA03_RS03220 SM00487 DEAD-like helicases superfamily APA03_RS03220 SM00490 helicase superfamily c-terminal domain APA03_RS03230 SM00947 Carbonic anhydrase APA03_RS03245 SM01409 APA03_RS03245 APA03_RS03250 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. APA03_RS03250 SM00954 Region found in RelA / SpoT proteins APA03_RS03265 SM00358 Double-stranded RNA binding motif APA03_RS03265 SM00535 Ribonuclease III family APA03_RS03300 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APA03_RS03310 SM00935 Outer membrane protein (OmpH-like) APA03_RS03425 SM00382 ATPases associated with a variety of cellular activities APA03_RS03440 SM00116 Domain in cystathionine beta-synthase and other proteins. APA03_RS03445 SM00474 3'-5' exonuclease APA03_RS03450 SM00967 RNA 2'-O ribose methyltransferase substrate binding APA03_RS03465 SM00072 Guanylate kinase homologues. APA03_RS03495 SM00382 ATPases associated with a variety of cellular activities APA03_RS03510 SM00382 ATPases associated with a variety of cellular activities APA03_RS03550 SM00345 helix_turn_helix gluconate operon transcriptional repressor APA03_RS03550 SM00895 APA03_RS03550 APA03_RS03640 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APA03_RS03645 SM00487 DEAD-like helicases superfamily APA03_RS03645 SM00490 helicase superfamily c-terminal domain APA03_RS03645 SM00847 Helicase associated domain (HA2) Add an annotation APA03_RS03690 SM01007 Class II Aldolase and Adducin N-terminal domain APA03_RS03705 SM00904 Riboflavin kinase APA03_RS03725 SM00853 MutL C terminal dimerisation domain APA03_RS03725 SM01340 APA03_RS03725 APA03_RS03740 SM00387 Histidine kinase-like ATPases APA03_RS03740 SM00433 TopoisomeraseII APA03_RS03775 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APA03_RS03775 SM00245 tail specific protease APA03_RS03780 SM00955 APA03_RS03780 APA03_RS03785 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain APA03_RS03785 SM00437 Bacterial DNA topoisomerase I DNA-binding domain APA03_RS03785 SM00493 APA03_RS03785 APA03_RS03815 SM01207 APA03_RS03815 APA03_RS03850 SM00861 Transketolase, pyrimidine binding domain APA03_RS03875 SM00996 S-adenosyl-L-homocysteine hydrolase APA03_RS03875 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain APA03_RS03880 SM00563 Phosphate acyltransferases APA03_RS03890 SM00849 Metallo-beta-lactamase superfamily APA03_RS03940 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain APA03_RS03975 SM00852 Probable molybdopterin binding domain APA03_RS04025 SM00978 APA03_RS04025 APA03_RS04035 SM01235 APA03_RS04035 APA03_RS04040 SM00463 Small MutS-related domain APA03_RS04145 SM00857 Resolvase, N terminal domain APA03_RS04220 SM00954 Region found in RelA / SpoT proteins APA03_RS04295 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains APA03_RS04340 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APA03_RS04345 SM00829 Enoylreductase APA03_RS04395 SM00479 APA03_RS04395 APA03_RS04450 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain APA03_RS04620 SM00448 cheY-homologous receiver domain APA03_RS04620 SM00862 Transcriptional regulatory protein, C terminal APA03_RS04625 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APA03_RS04625 SM00387 Histidine kinase-like ATPases APA03_RS04625 SM00388 His Kinase A (phosphoacceptor) domain APA03_RS04645 SM00649 Ribosomal protein L11/L12 APA03_RS04670 SM00663 RNA polymerase I subunit A N-terminus APA03_RS04690 SM01403 APA03_RS04690 APA03_RS04710 SM01382 APA03_RS04710 APA03_RS04710 SM01383 APA03_RS04710 APA03_RS04725 SM00322 K homology RNA-binding domain APA03_RS04745 SM01374 APA03_RS04745 APA03_RS04750 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. APA03_RS04815 SM00662 RNA polymerases D APA03_RS04835 SM00382 ATPases associated with a variety of cellular activities APA03_RS04910 SM00382 ATPases associated with a variety of cellular activities APA03_RS04925 SM00382 ATPases associated with a variety of cellular activities APA03_RS04950 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APA03_RS04950 SM00245 tail specific protease APA03_RS04975 SM00851 MGS-like domain APA03_RS04975 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain APA03_RS04980 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain APA03_RS04990 SM00400 zinc finger APA03_RS04990 SM00493 APA03_RS04990 APA03_RS05025 SM00650 Ribosomal RNA adenine dimethylases APA03_RS05055 SM00382 ATPases associated with a variety of cellular activities APA03_RS05060 SM00345 helix_turn_helix gluconate operon transcriptional repressor APA03_RS05060 SM00895 APA03_RS05060 APA03_RS05100 SM00028 Tetratricopeptide repeats APA03_RS05105 SM01058 CarD-like/TRCF domain APA03_RS05130 SM00382 ATPases associated with a variety of cellular activities APA03_RS05155 SM00387 Histidine kinase-like ATPases APA03_RS05160 SM00091 PAS domain APA03_RS05160 SM00387 Histidine kinase-like ATPases APA03_RS05160 SM00388 His Kinase A (phosphoacceptor) domain APA03_RS05160 SM00448 cheY-homologous receiver domain APA03_RS05170 SM00382 ATPases associated with a variety of cellular activities APA03_RS05170 SM01086 C-terminal, D2-small domain, of ClpB protein APA03_RS05180 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain APA03_RS05215 SM00873 B3/4 domain APA03_RS05215 SM00874 tRNA synthetase B5 domain APA03_RS05215 SM00896 Ferredoxin-fold anticodon binding domain APA03_RS05235 SM00100 Cyclic nucleotide-monophosphate binding domain APA03_RS05245 SM00363 S4 RNA-binding domain APA03_RS05245 SM01390 APA03_RS05245 APA03_RS05260 SM01329 APA03_RS05260 APA03_RS05295 SM01001 AIR carboxylase APA03_RS05390 SM00855 Phosphoglycerate mutase family APA03_RS05395 SM00830 Chorismate mutase type II APA03_RS05415 SM00968 SMC proteins Flexible Hinge Domain APA03_RS05425 SM00116 Domain in cystathionine beta-synthase and other proteins. APA03_RS05425 SM01091 Transporter associated domain APA03_RS05440 SM00729 Elongator protein 3, MiaB family, Radical SAM APA03_RS05445 SM00563 Phosphate acyltransferases APA03_RS05470 SM00278 Helix-hairpin-helix DNA-binding motif class 1 APA03_RS05470 SM00465 GIY-YIG type nucleases (URI domain) APA03_RS05520 SM00852 Probable molybdopterin binding domain APA03_RS05535 SM01192 APA03_RS05535 APA03_RS05535 SM01193 APA03_RS05535 APA03_RS05565 SM00487 DEAD-like helicases superfamily APA03_RS05565 SM00490 helicase superfamily c-terminal domain APA03_RS05575 SM00487 DEAD-like helicases superfamily APA03_RS05575 SM00490 helicase superfamily c-terminal domain APA03_RS05575 SM00982 APA03_RS05575 APA03_RS05575 SM01058 CarD-like/TRCF domain APA03_RS05600 SM00327 von Willebrand factor (vWF) type A domain APA03_RS05610 SM00271 DnaJ molecular chaperone homology domain APA03_RS05645 SM00729 Elongator protein 3, MiaB family, Radical SAM APA03_RS05695 SM00530 Helix-turn-helix XRE-family like proteins APA03_RS05710 SM00937 APA03_RS05710 APA03_RS05770 SM00936 Penicillin-binding protein 5, C-terminal domain APA03_RS05795 SM00849 Metallo-beta-lactamase superfamily APA03_RS05845 SM00729 Elongator protein 3, MiaB family, Radical SAM APA03_RS05845 SM00876 Biotin and Thiamin Synthesis associated domain APA03_RS05915 SM00825 Beta-ketoacyl synthase APA03_RS05925 SM00822 APA03_RS05925 APA03_RS05930 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. APA03_RS05955 SM00857 Resolvase, N terminal domain APA03_RS05975 SM00357 Cold shock protein domain APA03_RS05985 SM01130 APA03_RS05985 APA03_RS06015 SM00382 ATPases associated with a variety of cellular activities APA03_RS06025 SM00450 Rhodanese Homology Domain APA03_RS06040 SM00155 Phospholipase D. Active site motifs. APA03_RS06070 SM01211 APA03_RS06070 APA03_RS06090 SM00998 Adenylosuccinate lyase C-terminus APA03_RS06125 SM00729 Elongator protein 3, MiaB family, Radical SAM APA03_RS06140 SM00861 Transketolase, pyrimidine binding domain APA03_RS06200 SM00387 Histidine kinase-like ATPases APA03_RS06200 SM00433 TopoisomeraseII APA03_RS06210 SM00480 DNA polymerase III beta subunit APA03_RS06215 SM00382 ATPases associated with a variety of cellular activities APA03_RS06215 SM00760 Bacterial dnaA protein helix-turn-helix domain APA03_RS06225 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain APA03_RS06225 SM01232 APA03_RS06225 APA03_RS06250 SM00382 ATPases associated with a variety of cellular activities APA03_RS06300 SM00822 APA03_RS06300 APA03_RS06345 SM00420 helix_turn_helix, Deoxyribose operon repressor APA03_RS06345 SM01134 APA03_RS06345 APA03_RS06350 SM00341 Helicase and RNase D C-terminal APA03_RS06350 SM00487 DEAD-like helicases superfamily APA03_RS06350 SM00490 helicase superfamily c-terminal domain APA03_RS06350 SM00956 APA03_RS06350 APA03_RS06360 SM00382 ATPases associated with a variety of cellular activities APA03_RS06365 SM00382 ATPases associated with a variety of cellular activities APA03_RS06370 SM00387 Histidine kinase-like ATPases APA03_RS06390 SM00448 cheY-homologous receiver domain APA03_RS06395 SM00382 ATPases associated with a variety of cellular activities APA03_RS06405 SM00829 Enoylreductase APA03_RS06445 SM00382 ATPases associated with a variety of cellular activities APA03_RS06500 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain APA03_RS06505 SM01092 CO dehydrogenase flavoprotein C-terminal domain APA03_RS06580 SM00382 ATPases associated with a variety of cellular activities APA03_RS06650 SM01060 APA03_RS06650 APA03_RS06705 SM00382 ATPases associated with a variety of cellular activities APA03_RS06785 SM00342 helix_turn_helix, arabinose operon control protein APA03_RS06855 SM00965 Secretin and TonB N terminus short domain APA03_RS06870 SM00965 Secretin and TonB N terminus short domain APA03_RS06890 SM00062 Bacterial periplasmic substrate-binding proteins APA03_RS06895 SM00382 ATPases associated with a variety of cellular activities APA03_RS07030 SM00382 ATPases associated with a variety of cellular activities APA03_RS07050 SM00796 Allophanate hydrolase subunit 1 APA03_RS07050 SM00797 Allophanate hydrolase subunit 2 APA03_RS07050 SM00878 Biotin carboxylase C-terminal domain APA03_RS07130 SM00903 Flavin reductase like domain APA03_RS07200 SM00487 DEAD-like helicases superfamily APA03_RS07360 SM00886 Stress responsive A/B Barrel Domain APA03_RS07385 SM00564 beta-propeller repeat APA03_RS07440 SM00890 Domain of unknown function APA03_RS07485 SM00852 Probable molybdopterin binding domain APA03_RS07545 SM00861 Transketolase, pyrimidine binding domain APA03_RS07550 SM00363 S4 RNA-binding domain APA03_RS07595 SM00448 cheY-homologous receiver domain APA03_RS07595 SM00862 Transcriptional regulatory protein, C terminal APA03_RS07615 SM00116 Domain in cystathionine beta-synthase and other proteins. APA03_RS07615 SM01240 APA03_RS07615 APA03_RS07635 SM00382 ATPases associated with a variety of cellular activities APA03_RS07640 SM00382 ATPases associated with a variety of cellular activities APA03_RS07650 SM00014 Acid phosphatase homologues APA03_RS07730 SM00729 Elongator protein 3, MiaB family, Radical SAM APA03_RS07775 SM00382 ATPases associated with a variety of cellular activities APA03_RS07780 SM00382 ATPases associated with a variety of cellular activities APA03_RS07790 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. APA03_RS07800 SM00671 Sel1-like repeats. APA03_RS07815 SM00870 APA03_RS07815 APA03_RS07860 SM00382 ATPases associated with a variety of cellular activities APA03_RS07885 SM00829 Enoylreductase APA03_RS07985 SM01266 APA03_RS07985 APA03_RS08030 SM00387 Histidine kinase-like ATPases APA03_RS08030 SM00388 His Kinase A (phosphoacceptor) domain APA03_RS08035 SM00448 cheY-homologous receiver domain APA03_RS08035 SM00862 Transcriptional regulatory protein, C terminal APA03_RS08210 SM00346 helix_turn_helix isocitrate lyase regulation APA03_RS08220 SM00382 ATPases associated with a variety of cellular activities APA03_RS08235 SM00849 Metallo-beta-lactamase superfamily APA03_RS08280 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region APA03_RS08285 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region APA03_RS08330 SM00411 bacterial (prokaryotic) histone like domain APA03_RS08335 SM00382 ATPases associated with a variety of cellular activities APA03_RS08335 SM00464 Found in ATP-dependent protease La (LON) APA03_RS08340 SM00382 ATPases associated with a variety of cellular activities APA03_RS08340 SM00994 ClpX C4-type zinc finger APA03_RS08340 SM01086 C-terminal, D2-small domain, of ClpB protein APA03_RS08375 SM00487 DEAD-like helicases superfamily APA03_RS08375 SM00490 helicase superfamily c-terminal domain APA03_RS08410 SM00382 ATPases associated with a variety of cellular activities APA03_RS08440 SM00838 Elongation factor G C-terminus APA03_RS08440 SM00889 Elongation factor G, domain IV APA03_RS08455 SM00382 ATPases associated with a variety of cellular activities APA03_RS08465 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. APA03_RS08470 SM00533 DNA-binding domain of DNA mismatch repair MUTS family APA03_RS08470 SM00534 ATPase domain of DNA mismatch repair MUTS family APA03_RS08475 SM00028 Tetratricopeptide repeats APA03_RS08505 SM00978 APA03_RS08505 APA03_RS08545 SM00344 helix_turn_helix ASNC type APA03_RS08565 SM00411 bacterial (prokaryotic) histone like domain APA03_RS08570 SM00986 Uracil DNA glycosylase superfamily APA03_RS08570 SM00987 UreE urease accessory protein, C-terminal domain APA03_RS08590 SM00422 helix_turn_helix, mercury resistance APA03_RS08595 SM00411 bacterial (prokaryotic) histone like domain APA03_RS08625 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APA03_RS08625 SM00387 Histidine kinase-like ATPases APA03_RS08625 SM00388 His Kinase A (phosphoacceptor) domain APA03_RS08630 SM00448 cheY-homologous receiver domain APA03_RS08630 SM00862 Transcriptional regulatory protein, C terminal APA03_RS08635 SM00347 helix_turn_helix multiple antibiotic resistance protein APA03_RS08655 SM01329 APA03_RS08655 APA03_RS08690 SM00382 ATPases associated with a variety of cellular activities APA03_RS08690 SM00962 SRP54-type protein, GTPase domain APA03_RS08690 SM00963 SRP54-type protein, helical bundle domain APA03_RS08710 SM00363 S4 RNA-binding domain APA03_RS08715 SM00382 ATPases associated with a variety of cellular activities APA03_RS08745 SM00382 ATPases associated with a variety of cellular activities APA03_RS08750 SM00564 beta-propeller repeat APA03_RS08820 SM00382 ATPases associated with a variety of cellular activities APA03_RS08820 SM01086 C-terminal, D2-small domain, of ClpB protein APA03_RS08840 SM00382 ATPases associated with a variety of cellular activities APA03_RS08840 SM00448 cheY-homologous receiver domain APA03_RS08845 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APA03_RS08845 SM00387 Histidine kinase-like ATPases APA03_RS08845 SM00388 His Kinase A (phosphoacceptor) domain APA03_RS08850 SM00382 ATPases associated with a variety of cellular activities APA03_RS08850 SM00448 cheY-homologous receiver domain APA03_RS08855 SM00091 PAS domain APA03_RS08855 SM00387 Histidine kinase-like ATPases APA03_RS08855 SM00388 His Kinase A (phosphoacceptor) domain APA03_RS08935 SM00984 UDP binding domain APA03_RS08945 SM00938 Nitrogen regulatory protein P-II APA03_RS08950 SM00971 Serine acetyltransferase, N-terminal APA03_RS09010 SM00841 Elongation factor P, C-terminal APA03_RS09010 SM01185 APA03_RS09010 APA03_RS09020 SM00491 APA03_RS09020 APA03_RS09025 SM00357 Cold shock protein domain APA03_RS09035 SM00883 Chaperonin 10 Kd subunit APA03_RS09240 SM00607 eel-Fucolectin Tachylectin-4 Pentaxrin-1 Domain APA03_RS09270 SM00487 DEAD-like helicases superfamily APA03_RS09270 SM00490 helicase superfamily c-terminal domain APA03_RS09275 SM01323 APA03_RS09275 APA03_RS09325 SM00852 Probable molybdopterin binding domain APA03_RS09490 SM00487 DEAD-like helicases superfamily APA03_RS09490 SM00490 helicase superfamily c-terminal domain APA03_RS09555 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase APA03_RS09660 SM00842 Cell division protein FtsA APA03_RS09665 SM00864 Tubulin/FtsZ family, GTPase domain APA03_RS09665 SM00865 Tubulin/FtsZ family, C-terminal domain APA03_RS09685 SM00292 breast cancer carboxy-terminal domain APA03_RS09685 SM00532 Ligase N family APA03_RS09805 SM00487 DEAD-like helicases superfamily APA03_RS09805 SM00490 helicase superfamily c-terminal domain APA03_RS09835 SM01004 Delta-aminolevulinic acid dehydratase APA03_RS09845 SM00434 DNA Topoisomerase IV APA03_RS09890 SM00481 DNA polymerase alpha chain like domain APA03_RS09930 SM00507 HNH nucleases APA03_RS09950 SM00729 Elongator protein 3, MiaB family, Radical SAM APA03_RS09955 SM00562 APA03_RS09955 APA03_RS09960 SM00382 ATPases associated with a variety of cellular activities APA03_RS09970 SM00448 cheY-homologous receiver domain APA03_RS09970 SM00862 Transcriptional regulatory protein, C terminal APA03_RS09975 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APA03_RS09975 SM00387 Histidine kinase-like ATPases APA03_RS09990 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain APA03_RS10000 SM00028 Tetratricopeptide repeats APA03_RS10080 SM00646 APA03_RS10080 APA03_RS10085 SM00316 Ribosomal protein S1-like RNA-binding domain APA03_RS10100 SM00316 Ribosomal protein S1-like RNA-binding domain APA03_RS10235 SM00507 HNH nucleases APA03_RS10275 SM01040 BRO family, N-terminal domain APA03_RS10310 SM00479 APA03_RS10310 APA03_RS10400 SM00460 Transglutaminase/protease-like homologues APA03_RS10510 SM00797 Allophanate hydrolase subunit 2 APA03_RS10515 SM00796 Allophanate hydrolase subunit 1 APA03_RS10530 SM00878 Biotin carboxylase C-terminal domain APA03_RS10560 SM00642 Alpha-amylase domain APA03_RS10565 SM00642 Alpha-amylase domain APA03_RS10570 SM00642 Alpha-amylase domain APA03_RS10580 SM00642 Alpha-amylase domain APA03_RS10750 SM00836 DALR anticodon binding domain APA03_RS10750 SM01016 Arginyl tRNA synthetase N terminal dom APA03_RS10755 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. APA03_RS10800 SM00729 Elongator protein 3, MiaB family, Radical SAM APA03_RS10845 SM00363 S4 RNA-binding domain APA03_RS10855 SM00382 ATPases associated with a variety of cellular activities APA03_RS10875 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs APA03_RS10875 SM00474 3'-5' exonuclease APA03_RS10875 SM00475 5'-3' exonuclease APA03_RS10875 SM00482 DNA polymerase A domain APA03_RS10885 SM00563 Phosphate acyltransferases APA03_RS10935 SM00564 beta-propeller repeat APA03_RS10955 SM00345 helix_turn_helix gluconate operon transcriptional repressor APA03_RS10995 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. APA03_RS11025 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family APA03_RS11095 SM00530 Helix-turn-helix XRE-family like proteins APA03_RS11110 SM00382 ATPases associated with a variety of cellular activities APA03_RS11140 SM00347 helix_turn_helix multiple antibiotic resistance protein APA03_RS11150 SM00903 Flavin reductase like domain APA03_RS11155 SM01007 Class II Aldolase and Adducin N-terminal domain APA03_RS11170 SM00822 APA03_RS11170 APA03_RS11205 SM00564 beta-propeller repeat APA03_RS11255 SM00382 ATPases associated with a variety of cellular activities APA03_RS11280 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. APA03_RS11290 SM00671 Sel1-like repeats. APA03_RS11405 SM00855 Phosphoglycerate mutase family APA03_RS11420 SM00833 Cobalamin synthesis protein cobW C-terminal domain APA03_RS11435 SM00347 helix_turn_helix multiple antibiotic resistance protein APA03_RS11455 SM00903 Flavin reductase like domain APA03_RS11465 SM00382 ATPases associated with a variety of cellular activities APA03_RS11530 SM00857 Resolvase, N terminal domain APA03_RS11690 SM00382 ATPases associated with a variety of cellular activities APA03_RS11715 SM00248 ankyrin repeats APA03_RS11720 SM00861 Transketolase, pyrimidine binding domain APA03_RS11730 SM01350 APA03_RS11730 APA03_RS11775 SM00829 Enoylreductase APA03_RS11790 SM00729 Elongator protein 3, MiaB family, Radical SAM APA03_RS11810 SM00382 ATPases associated with a variety of cellular activities APA03_RS11835 SM00387 Histidine kinase-like ATPases APA03_RS11835 SM00388 His Kinase A (phosphoacceptor) domain APA03_RS11835 SM00448 cheY-homologous receiver domain APA03_RS11840 SM00421 helix_turn_helix, Lux Regulon APA03_RS11840 SM00448 cheY-homologous receiver domain APA03_RS11890 SM00988 UreE urease accessory protein, N-terminal domain APA03_RS11960 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APA03_RS11970 SM00849 Metallo-beta-lactamase superfamily APA03_RS12060 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain APA03_RS12075 SM00347 helix_turn_helix multiple antibiotic resistance protein APA03_RS12095 SM00382 ATPases associated with a variety of cellular activities APA03_RS12145 SM00857 Resolvase, N terminal domain APA03_RS12150 SM00530 Helix-turn-helix XRE-family like proteins APA03_RS12265 SM00849 Metallo-beta-lactamase superfamily APA03_RS12345 SM00434 DNA Topoisomerase IV APA03_RS12360 SM00316 Ribosomal protein S1-like RNA-binding domain APA03_RS12360 SM00322 K homology RNA-binding domain APA03_RS12365 SM01387 APA03_RS12365 APA03_RS12380 SM00382 ATPases associated with a variety of cellular activities APA03_RS12410 SM00671 Sel1-like repeats. APA03_RS12420 SM00382 ATPases associated with a variety of cellular activities APA03_RS12430 SM01018 B12 binding domain APA03_RS12505 SM00382 ATPases associated with a variety of cellular activities APA03_RS12505 SM00962 SRP54-type protein, GTPase domain APA03_RS12505 SM00963 SRP54-type protein, helical bundle domain APA03_RS12510 SM00729 Elongator protein 3, MiaB family, Radical SAM APA03_RS12530 SM00487 DEAD-like helicases superfamily APA03_RS12530 SM00490 helicase superfamily c-terminal domain APA03_RS12570 SM00382 ATPases associated with a variety of cellular activities APA03_RS12595 SM00829 Enoylreductase APA03_RS12605 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APA03_RS12665 SM01005 Alanine racemase, C-terminal domain APA03_RS12670 SM00344 helix_turn_helix ASNC type APA03_RS12690 SM00316 Ribosomal protein S1-like RNA-binding domain APA03_RS12690 SM00322 K homology RNA-binding domain APA03_RS12705 SM00382 ATPases associated with a variety of cellular activities APA03_RS12720 SM00062 Bacterial periplasmic substrate-binding proteins APA03_RS12720 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. APA03_RS12725 SM00382 ATPases associated with a variety of cellular activities APA03_RS12735 SM00382 ATPases associated with a variety of cellular activities APA03_RS12775 SM00878 Biotin carboxylase C-terminal domain APA03_RS12845 SM00732 Likely ribonuclease with RNase H fold. APA03_RS12860 SM00845 GatB domain APA03_RS12870 SM00382 ATPases associated with a variety of cellular activities APA03_RS12875 SM00478 endonuclease III APA03_RS12885 SM00478 endonuclease III APA03_RS12965 SM00893 Electron transfer flavoprotein domain APA03_RS12970 SM00893 Electron transfer flavoprotein domain APA03_RS12985 SM00729 Elongator protein 3, MiaB family, Radical SAM APA03_RS12995 SM00100 Cyclic nucleotide-monophosphate binding domain APA03_RS12995 SM00419 helix_turn_helix, cAMP Regulatory protein APA03_RS13000 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APA03_RS13015 SM00363 S4 RNA-binding domain APA03_RS13055 SM00857 Resolvase, N terminal domain APA03_RS13105 SM00855 Phosphoglycerate mutase family APA03_RS13140 SM00382 ATPases associated with a variety of cellular activities APA03_RS13140 SM00843 APA03_RS13140 APA03_RS13190 SM00840 APA03_RS13190 APA03_RS13230 SM00448 cheY-homologous receiver domain APA03_RS13230 SM00862 Transcriptional regulatory protein, C terminal APA03_RS13245 SM00382 ATPases associated with a variety of cellular activities APA03_RS13290 SM00382 ATPases associated with a variety of cellular activities APA03_RS13295 SM00278 Helix-hairpin-helix DNA-binding motif class 1 APA03_RS13310 SM00957 SecA DEAD-like domain APA03_RS13310 SM00958 SecA preprotein cross-linking domain APA03_RS13345 SM00271 DnaJ molecular chaperone homology domain APA03_RS13380 SM00411 bacterial (prokaryotic) histone like domain APA03_RS13475 SM00470 ParB-like nuclease domain APA03_RS13490 SM01228 APA03_RS13490 APA03_RS13595 SM00857 Resolvase, N terminal domain APA03_RS13600 SM00885 D5 N terminal like APA03_RS13605 SM00943 Bifunctional DNA primase/polymerase, N-terminal APA03_RS15005 SM00564 beta-propeller repeat APA03_RS15360 SM00387 Histidine kinase-like ATPases APA03_RS15360 SM00388 His Kinase A (phosphoacceptor) domain APA03_RS15360 SM00448 cheY-homologous receiver domain APA03_RS15580 SM01002 Alanine dehydrogenase/PNT, C-terminal domain APA03_RS15760 SM00530 Helix-turn-helix XRE-family like proteins