locus-tag class description APA07_RS00015 PF00589 Phage integrase family APA07_RS00015 PF13356 Arm DNA-binding domain APA07_RS00020 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 APA07_RS00030 PF07690 Major Facilitator Superfamily APA07_RS00040 PF03966 Trm112p-like protein APA07_RS00045 PF00004 ATPase family associated with various cellular activities (AAA) APA07_RS00045 PF02190 ATP-dependent protease La (LON) substrate-binding domain APA07_RS00045 PF05362 Lon protease (S16) C-terminal proteolytic domain APA07_RS00050 PF00085 Thioredoxin APA07_RS00055 PF17760 UvrA interaction domain APA07_RS00055 PF17755 UvrA DNA-binding domain APA07_RS00080 PF00881 Nitroreductase family APA07_RS00090 PF00583 Acetyltransferase (GNAT) family APA07_RS00095 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain APA07_RS00095 PF02844 Phosphoribosylglycinamide synthetase, N domain APA07_RS00095 PF02843 Phosphoribosylglycinamide synthetase, C domain APA07_RS00100 PF13742 OB-fold nucleic acid binding domain APA07_RS00100 PF02601 Exonuclease VII, large subunit APA07_RS00115 PF00266 Aminotransferase class-V APA07_RS00120 PF00171 Aldehyde dehydrogenase family APA07_RS00125 PF08240 Alcohol dehydrogenase GroES-like domain APA07_RS00125 PF00107 Zinc-binding dehydrogenase APA07_RS00130 PF02233 NAD(P) transhydrogenase beta subunit APA07_RS00135 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch APA07_RS00140 PF01262 Alanine dehydrogenase/PNT, C-terminal domain APA07_RS00140 PF05222 Alanine dehydrogenase/PNT, N-terminal domain APA07_RS00145 PF01118 Semialdehyde dehydrogenase, NAD binding domain APA07_RS00145 PF02774 Semialdehyde dehydrogenase, dimerisation domain APA07_RS00150 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit APA07_RS00155 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit APA07_RS00160 PF02910 Fumarate reductase flavoprotein C-term APA07_RS00160 PF00890 FAD binding domain APA07_RS00165 PF13085 2Fe-2S iron-sulfur cluster binding domain APA07_RS00175 PF00892 EamA-like transporter family APA07_RS00180 PF00162 Phosphoglycerate kinase APA07_RS00185 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain APA07_RS00185 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain APA07_RS00190 PF02780 Transketolase, C-terminal domain APA07_RS00190 PF00456 Transketolase, thiamine diphosphate binding domain APA07_RS00190 PF02779 Transketolase, pyrimidine binding domain APA07_RS00200 PF00155 Aminotransferase class I and II APA07_RS00205 PF13462 Thioredoxin APA07_RS00215 PF00154 recA bacterial DNA recombination protein APA07_RS00225 PF03459 TOBE domain APA07_RS00225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APA07_RS00230 PF04349 Periplasmic glucan biosynthesis protein, MdoG APA07_RS00235 PF13632 Glycosyl transferase family group 2 APA07_RS00240 PF01979 Amidohydrolase family APA07_RS00245 PF07690 Major Facilitator Superfamily APA07_RS00255 PF12170 DNA polymerase III tau subunit V interacting with alpha APA07_RS00255 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding APA07_RS00255 PF12169 DNA polymerase III subunits gamma and tau domain III APA07_RS00260 PF02575 YbaB/EbfC DNA-binding family APA07_RS00265 PF02132 RecR protein APA07_RS00265 PF13662 Toprim domain APA07_RS00275 PF02152 Dihydroneopterin aldolase APA07_RS00285 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) APA07_RS00290 PF02224 Cytidylate kinase APA07_RS00295 PF00575 S1 RNA binding domain APA07_RS00310 PF01725 Ham1 family APA07_RS00315 PF03725 3' exoribonuclease family, domain 2 APA07_RS00315 PF01138 3' exoribonuclease family, domain 1 APA07_RS00320 PF01628 HrcA protein C terminal domain APA07_RS00325 PF17092 Penicillin-binding protein OB-like domain APA07_RS00325 PF00912 Transglycosylase APA07_RS00325 PF00905 Penicillin binding protein transpeptidase domain APA07_RS00330 PF03462 PCRF domain APA07_RS00330 PF00472 RF-1 domain APA07_RS00340 PF01618 MotA/TolQ/ExbB proton channel family APA07_RS00345 PF02472 Biopolymer transport protein ExbD/TolR APA07_RS00350 PF02472 Biopolymer transport protein ExbD/TolR APA07_RS00360 PF01098 Cell cycle protein APA07_RS00365 PF03717 Penicillin-binding Protein dimerisation domain APA07_RS00365 PF00905 Penicillin binding protein transpeptidase domain APA07_RS00385 PF00682 HMGL-like APA07_RS00385 PF08502 LeuA allosteric (dimerisation) domain APA07_RS00390 PF02628 Cytochrome oxidase assembly protein APA07_RS00400 PF07690 Major Facilitator Superfamily APA07_RS00405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APA07_RS00405 PF08448 PAS fold APA07_RS00405 PF00512 His Kinase A (phospho-acceptor) domain APA07_RS00405 PF00072 Response regulator receiver domain APA07_RS00405 PF13188 PAS domain APA07_RS00410 PF00156 Phosphoribosyl transferase domain APA07_RS00415 PF04632 Fusaric acid resistance protein family APA07_RS00420 PF05161 MOFRL family APA07_RS00420 PF13660 Domain of unknown function (DUF4147) APA07_RS00425 PF03167 Uracil DNA glycosylase superfamily APA07_RS00430 PF13442 Cytochrome C oxidase, cbb3-type, subunit III APA07_RS00430 PF00034 Cytochrome c APA07_RS00435 PF13442 Cytochrome C oxidase, cbb3-type, subunit III APA07_RS00435 PF13360 PQQ-like domain APA07_RS00445 PF01027 Inhibitor of apoptosis-promoting Bax1 APA07_RS00455 PF00116 Cytochrome C oxidase subunit II, periplasmic domain APA07_RS00455 PF06481 COX Aromatic Rich Motif APA07_RS00460 PF00115 Cytochrome C and Quinol oxidase polypeptide I APA07_RS00465 PF00510 Cytochrome c oxidase subunit III APA07_RS00470 PF03626 Prokaryotic Cytochrome C oxidase subunit IV APA07_RS00480 PF11953 Domain of unknown function (DUF3470) APA07_RS00480 PF00037 4Fe-4S binding domain APA07_RS00490 PF00883 Cytosol aminopeptidase family, catalytic domain APA07_RS00490 PF02789 Cytosol aminopeptidase family, N-terminal domain APA07_RS00505 PF00953 Glycosyl transferase family 4 APA07_RS00510 PF02719 Polysaccharide biosynthesis protein APA07_RS00515 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family APA07_RS00525 PF01979 Amidohydrolase family APA07_RS00530 PF07992 Pyridine nucleotide-disulphide oxidoreductase APA07_RS00530 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APA07_RS00535 PF00175 Oxidoreductase NAD-binding domain APA07_RS00535 PF00970 Oxidoreductase FAD-binding domain APA07_RS00550 PF09335 SNARE associated Golgi protein APA07_RS00555 PF00326 Prolyl oligopeptidase family APA07_RS00560 PF00390 Malic enzyme, N-terminal domain APA07_RS00560 PF03949 Malic enzyme, NAD binding domain APA07_RS00565 PF02357 Transcription termination factor nusG APA07_RS00565 PF00467 KOW motif APA07_RS00590 PF00213 ATP synthase delta (OSCP) subunit APA07_RS00595 PF02874 ATP synthase alpha/beta family, beta-barrel domain APA07_RS00595 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain APA07_RS00595 PF00306 ATP synthase alpha/beta chain, C terminal domain APA07_RS00600 PF00231 ATP synthase APA07_RS00605 PF02874 ATP synthase alpha/beta family, beta-barrel domain APA07_RS00605 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain APA07_RS00610 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain APA07_RS00615 PF14489 QueF-like protein APA07_RS00620 PF01612 3'-5' exonuclease APA07_RS00620 PF00570 HRDC domain APA07_RS00625 PF00294 pfkB family carbohydrate kinase APA07_RS00640 PF00324 Amino acid permease APA07_RS00645 PF12857 TOBE-like domain APA07_RS00645 PF00005 ABC transporter APA07_RS00645 PF17850 CysA C-terminal regulatory domain APA07_RS00650 PF00528 Binding-protein-dependent transport system inner membrane component APA07_RS00655 PF00528 Binding-protein-dependent transport system inner membrane component APA07_RS00685 PF02311 AraC-like ligand binding domain APA07_RS00685 PF12833 Helix-turn-helix domain APA07_RS00690 PF06751 Ethanolamine ammonia lyase large subunit (EutB) APA07_RS00695 PF05985 Ethanolamine ammonia-lyase light chain (EutC) APA07_RS00705 PF00529 HlyD membrane-fusion protein of T1SS APA07_RS00705 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APA07_RS00710 PF00873 AcrB/AcrD/AcrF family APA07_RS00715 PF02321 Outer membrane efflux protein APA07_RS00720 PF00313 'Cold-shock' DNA-binding domain APA07_RS00730 PF01609 Transposase DDE domain APA07_RS00750 PF07660 Secretin and TonB N terminus short domain APA07_RS00750 PF00593 TonB dependent receptor APA07_RS00750 PF07715 TonB-dependent Receptor Plug Domain APA07_RS00760 PF01075 Glycosyltransferase family 9 (heptosyltransferase) APA07_RS00775 PF00795 Carbon-nitrogen hydrolase APA07_RS00780 PF00486 Transcriptional regulatory protein, C terminal APA07_RS00780 PF00072 Response regulator receiver domain APA07_RS00785 PF00072 Response regulator receiver domain APA07_RS00785 PF00512 His Kinase A (phospho-acceptor) domain APA07_RS00785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APA07_RS00785 PF09308 LuxQ, periplasmic APA07_RS00805 PF00005 ABC transporter APA07_RS00805 PF12399 Branched-chain amino acid ATP-binding cassette transporter APA07_RS00810 PF00005 ABC transporter APA07_RS00875 PF00069 Protein kinase domain APA07_RS00875 PF03793 PASTA domain APA07_RS00880 PF00069 Protein kinase domain APA07_RS00880 PF03793 PASTA domain APA07_RS00890 PF13817 IS66 C-terminal element APA07_RS00890 PF13007 Transposase C of IS166 homeodomain APA07_RS00890 PF13005 zinc-finger binding domain of transposase IS66 APA07_RS00890 PF03050 Transposase IS66 family APA07_RS00900 PF01527 Transposase APA07_RS00920 PF03692 Putative zinc- or iron-chelating domain APA07_RS00935 PF08402 TOBE domain APA07_RS00935 PF00005 ABC transporter APA07_RS00960 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APA07_RS00960 PF00529 HlyD membrane-fusion protein of T1SS APA07_RS00965 PF02321 Outer membrane efflux protein APA07_RS00980 PF13249 Squalene-hopene cyclase N-terminal domain APA07_RS00980 PF13243 Squalene-hopene cyclase C-terminal domain APA07_RS00985 PF01593 Flavin containing amine oxidoreductase APA07_RS01005 PF01370 NAD dependent epimerase/dehydratase family APA07_RS01015 PF02153 Prephenate dehydrogenase APA07_RS01030 PF03466 LysR substrate binding domain APA07_RS01030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APA07_RS01035 PF00578 AhpC/TSA family APA07_RS01040 PF02627 Carboxymuconolactone decarboxylase family APA07_RS01055 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase APA07_RS01060 PF00719 Inorganic pyrophosphatase APA07_RS01070 PF12848 ABC transporter APA07_RS01070 PF00005 ABC transporter APA07_RS01075 PF13302 Acetyltransferase (GNAT) domain APA07_RS01090 PF00226 DnaJ domain APA07_RS01090 PF05099 Tellurite resistance protein TerB APA07_RS01100 PF08331 Domain of unknown function (DUF1730) APA07_RS01105 PF01702 Queuine tRNA-ribosyltransferase APA07_RS01110 PF02547 Queuosine biosynthesis protein APA07_RS01120 PF01161 Phosphatidylethanolamine-binding protein APA07_RS01135 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain APA07_RS01135 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain APA07_RS01150 PF02867 Ribonucleotide reductase, barrel domain APA07_RS01150 PF08471 Class II vitamin B12-dependent ribonucleotide reductase APA07_RS01175 PF02358 Trehalose-phosphatase APA07_RS01180 PF00982 Glycosyltransferase family 20 APA07_RS01185 PF02600 Disulfide bond formation protein DsbB APA07_RS01200 PF00248 Aldo/keto reductase family APA07_RS01210 PF00271 Helicase conserved C-terminal domain APA07_RS01210 PF04851 Type III restriction enzyme, res subunit APA07_RS01210 PF17757 UvrB interaction domain APA07_RS01210 PF02151 UvrB/uvrC motif APA07_RS01210 PF12344 Ultra-violet resistance protein B APA07_RS01220 PF00675 Insulinase (Peptidase family M16) APA07_RS01220 PF05193 Peptidase M16 inactive domain APA07_RS01250 PF00324 Amino acid permease APA07_RS01255 PF00817 impB/mucB/samB family APA07_RS01255 PF11799 impB/mucB/samB family C-terminal domain APA07_RS01270 PF01180 Dihydroorotate dehydrogenase APA07_RS01285 PF13277 YmdB-like protein APA07_RS01290 PF01812 5-formyltetrahydrofolate cyclo-ligase family APA07_RS01310 PF01791 DeoC/LacD family aldolase APA07_RS01315 PF02581 Thiamine monophosphate synthase APA07_RS01360 PF01609 Transposase DDE domain APA07_RS01385 PF00152 tRNA synthetases class II (D, K and N) APA07_RS01390 PF12544 Lysine-2,3-aminomutase APA07_RS01390 PF04055 Radical SAM superfamily APA07_RS01400 PF00557 Metallopeptidase family M24 APA07_RS01405 PF00768 D-alanyl-D-alanine carboxypeptidase APA07_RS01405 PF07943 Penicillin-binding protein 5, C-terminal domain APA07_RS01410 PF02617 ATP-dependent Clp protease adaptor protein ClpS APA07_RS01415 PF02861 Clp amino terminal domain, pathogenicity island component APA07_RS01415 PF17871 AAA lid domain APA07_RS01415 PF00004 ATPase family associated with various cellular activities (AAA) APA07_RS01415 PF10431 C-terminal, D2-small domain, of ClpB protein APA07_RS01415 PF07724 AAA domain (Cdc48 subfamily) APA07_RS01425 PF03976 Polyphosphate kinase 2 (PPK2) APA07_RS01430 PF02622 Uncharacterized ACR, COG1678 APA07_RS01435 PF03668 P-loop ATPase protein family APA07_RS01445 PF00512 His Kinase A (phospho-acceptor) domain APA07_RS01445 PF13755 Sensor N-terminal transmembrane domain APA07_RS01445 PF13756 Stimulus-sensing domain APA07_RS01445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APA07_RS01445 PF00672 HAMP domain APA07_RS01450 PF00486 Transcriptional regulatory protein, C terminal APA07_RS01450 PF00072 Response regulator receiver domain APA07_RS01455 PF01025 GrpE APA07_RS01460 PF00012 Hsp70 protein APA07_RS01465 PF00226 DnaJ domain APA07_RS01465 PF01556 DnaJ C terminal domain APA07_RS01465 PF00684 DnaJ central domain APA07_RS01470 PF05173 Dihydrodipicolinate reductase, C-terminus APA07_RS01470 PF01113 Dihydrodipicolinate reductase, N-terminus APA07_RS01475 PF00438 S-adenosylmethionine synthetase, N-terminal domain APA07_RS01475 PF02772 S-adenosylmethionine synthetase, central domain APA07_RS01475 PF02773 S-adenosylmethionine synthetase, C-terminal domain APA07_RS01480 PF02390 Putative methyltransferase APA07_RS01485 PF01808 AICARFT/IMPCHase bienzyme APA07_RS01485 PF02142 MGS-like domain APA07_RS01500 PF00892 EamA-like transporter family APA07_RS01505 PF02092 Glycyl-tRNA synthetase beta subunit APA07_RS01505 PF05746 DALR anticodon binding domain APA07_RS01510 PF02091 Glycyl-tRNA synthetase alpha subunit APA07_RS01520 PF01381 Helix-turn-helix APA07_RS01525 PF00795 Carbon-nitrogen hydrolase APA07_RS01535 PF01475 Ferric uptake regulator family APA07_RS01545 PF07498 Rho termination factor, N-terminal domain APA07_RS01545 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain APA07_RS01545 PF07497 Rho termination factor, RNA-binding domain APA07_RS01555 PF01544 CorA-like Mg2+ transporter protein APA07_RS01565 PF00291 Pyridoxal-phosphate dependent enzyme APA07_RS01570 PF00290 Tryptophan synthase alpha chain APA07_RS01575 PF00890 FAD binding domain APA07_RS01575 PF04205 FMN-binding domain APA07_RS01575 PF03358 NADPH-dependent FMN reductase APA07_RS01585 PF13393 Histidyl-tRNA synthetase APA07_RS01590 PF00709 Adenylosuccinate synthetase APA07_RS01595 PF00072 Response regulator receiver domain APA07_RS01595 PF00486 Transcriptional regulatory protein, C terminal APA07_RS01600 PF00512 His Kinase A (phospho-acceptor) domain APA07_RS01600 PF11808 Phosphate regulon sensor protein PhoR APA07_RS01600 PF00989 PAS fold APA07_RS01600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APA07_RS01605 PF12849 PBP superfamily domain APA07_RS01625 PF00328 Histidine phosphatase superfamily (branch 2) APA07_RS01630 PF01595 Cyclin M transmembrane N-terminal domain APA07_RS01630 PF00571 CBS domain APA07_RS01630 PF03471 Transporter associated domain APA07_RS01635 PF08240 Alcohol dehydrogenase GroES-like domain APA07_RS01635 PF00107 Zinc-binding dehydrogenase APA07_RS01640 PF03412 Peptidase C39 family APA07_RS01640 PF00005 ABC transporter APA07_RS01640 PF00664 ABC transporter transmembrane region APA07_RS01665 PF01118 Semialdehyde dehydrogenase, NAD binding domain APA07_RS01670 PF03819 MazG nucleotide pyrophosphohydrolase domain APA07_RS01680 PF00183 Hsp90 protein APA07_RS01770 PF01757 Acyltransferase family APA07_RS01795 PF06114 IrrE N-terminal-like domain APA07_RS01795 PF09856 Predicted transcriptional regulator (DUF2083) APA07_RS01795 PF01381 Helix-turn-helix APA07_RS01800 PF03972 MmgE/PrpD family APA07_RS01805 PF00285 Citrate synthase, C-terminal domain APA07_RS01815 PF00501 AMP-binding enzyme APA07_RS01815 PF16177 Acetyl-coenzyme A synthetase N-terminus APA07_RS01815 PF13193 AMP-binding enzyme C-terminal domain APA07_RS01820 PF07690 Major Facilitator Superfamily APA07_RS01835 PF02073 Thermophilic metalloprotease (M29) APA07_RS01850 PF00152 tRNA synthetases class II (D, K and N) APA07_RS01850 PF01336 OB-fold nucleic acid binding domain APA07_RS01850 PF02938 GAD domain APA07_RS01855 PF01212 Beta-eliminating lyase APA07_RS01860 PF01386 Ribosomal L25p family APA07_RS01860 PF14693 Ribosomal protein TL5, C-terminal domain APA07_RS01865 PF01195 Peptidyl-tRNA hydrolase APA07_RS01870 PF06071 Protein of unknown function (DUF933) APA07_RS01870 PF01926 50S ribosome-binding GTPase APA07_RS01875 PF00171 Aldehyde dehydrogenase family APA07_RS01880 PF01467 Cytidylyltransferase-like APA07_RS01890 PF02590 Predicted SPOUT methyltransferase APA07_RS01900 PF03466 LysR substrate binding domain APA07_RS01900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APA07_RS01905 PF03306 Alpha-acetolactate decarboxylase APA07_RS01910 PF00205 Thiamine pyrophosphate enzyme, central domain APA07_RS01910 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APA07_RS01910 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APA07_RS01920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APA07_RS01920 PF00205 Thiamine pyrophosphate enzyme, central domain APA07_RS01920 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APA07_RS01925 PF02754 Cysteine-rich domain APA07_RS01930 PF11870 Domain of unknown function (DUF3390) APA07_RS01930 PF13183 4Fe-4S dicluster domain APA07_RS01930 PF02589 LUD domain APA07_RS01940 PF13536 Putative multidrug resistance efflux transporter APA07_RS01945 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) APA07_RS01950 PF00692 dUTPase APA07_RS01965 PF04794 YdjC-like protein APA07_RS01985 PF02779 Transketolase, pyrimidine binding domain APA07_RS01985 PF02780 Transketolase, C-terminal domain APA07_RS01985 PF13292 1-deoxy-D-xylulose-5-phosphate synthase APA07_RS01995 PF04055 Radical SAM superfamily APA07_RS01995 PF06463 Molybdenum Cofactor Synthesis C APA07_RS02000 PF01595 Cyclin M transmembrane N-terminal domain APA07_RS02000 PF00571 CBS domain APA07_RS02000 PF03471 Transporter associated domain APA07_RS02005 PF01464 Transglycosylase SLT domain APA07_RS02010 PF03167 Uracil DNA glycosylase superfamily APA07_RS02020 PF00288 GHMP kinases N terminal domain APA07_RS02020 PF08544 GHMP kinases C terminal APA07_RS02035 PF00106 short chain dehydrogenase APA07_RS02050 PF01554 MatE APA07_RS02055 PF00005 ABC transporter APA07_RS02065 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase APA07_RS02065 PF14572 Phosphoribosyl synthetase-associated domain APA07_RS02110 PF03466 LysR substrate binding domain APA07_RS02110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APA07_RS02115 PF00999 Sodium/hydrogen exchanger family APA07_RS02125 PF00593 TonB dependent receptor APA07_RS02125 PF07715 TonB-dependent Receptor Plug Domain APA07_RS02135 PF01032 FecCD transport family APA07_RS02140 PF00005 ABC transporter APA07_RS02145 PF07691 PA14 domain APA07_RS02145 PF00728 Glycosyl hydrolase family 20, catalytic domain APA07_RS02145 PF02838 Glycosyl hydrolase family 20, domain 2 APA07_RS02150 PF01869 BadF/BadG/BcrA/BcrD ATPase family APA07_RS02155 PF13580 SIS domain APA07_RS02165 PF01075 Glycosyltransferase family 9 (heptosyltransferase) APA07_RS02175 PF01609 Transposase DDE domain APA07_RS02205 PF01641 SelR domain APA07_RS02220 PF00155 Aminotransferase class I and II APA07_RS02235 PF13340 Putative transposase of IS4/5 family (DUF4096) APA07_RS02250 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus APA07_RS02250 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus APA07_RS02270 PF03466 LysR substrate binding domain APA07_RS02270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APA07_RS02280 PF07291 Methylamine utilisation protein MauE APA07_RS02285 PF00578 AhpC/TSA family APA07_RS02290 PF02975 Methylamine dehydrogenase, L chain APA07_RS02305 PF00578 AhpC/TSA family APA07_RS02315 PF00248 Aldo/keto reductase family APA07_RS02320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APA07_RS02320 PF03466 LysR substrate binding domain APA07_RS02325 PF00171 Aldehyde dehydrogenase family APA07_RS02330 PF13442 Cytochrome C oxidase, cbb3-type, subunit III APA07_RS02330 PF00034 Cytochrome c APA07_RS02335 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase APA07_RS02340 PF01799 [2Fe-2S] binding domain APA07_RS02340 PF00111 2Fe-2S iron-sulfur cluster binding domain APA07_RS02395 PF02325 YGGT family APA07_RS02480 PF00593 TonB dependent receptor APA07_RS02480 PF07715 TonB-dependent Receptor Plug Domain APA07_RS02570 PF00239 Resolvase, N terminal domain APA07_RS02570 PF02796 Helix-turn-helix domain of resolvase APA07_RS02590 PF01757 Acyltransferase family APA07_RS02615 PF17773 UPF0176 acylphosphatase like domain APA07_RS02615 PF00581 Rhodanese-like domain APA07_RS02740 PF00999 Sodium/hydrogen exchanger family APA07_RS02770 PF00551 Formyl transferase APA07_RS02775 PF04343 Protein of unknown function, DUF488 APA07_RS02780 PF02082 Transcriptional regulator APA07_RS02785 PF00106 short chain dehydrogenase APA07_RS02790 PF02537 CrcB-like protein, Camphor Resistance (CrcB) APA07_RS02805 PF03061 Thioesterase superfamily APA07_RS02825 PF01431 Peptidase family M13 APA07_RS02825 PF05649 Peptidase family M13 APA07_RS02835 PF00440 Bacterial regulatory proteins, tetR family APA07_RS02835 PF17938 Tetracyclin repressor-like, C-terminal domain APA07_RS02840 PF01144 Coenzyme A transferase APA07_RS02865 PF01144 Coenzyme A transferase APA07_RS02870 PF13660 Domain of unknown function (DUF4147) APA07_RS02870 PF05161 MOFRL family APA07_RS02875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain APA07_RS02875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain APA07_RS02875 PF02770 Acyl-CoA dehydrogenase, middle domain APA07_RS02895 PF01012 Electron transfer flavoprotein domain APA07_RS02900 PF01609 Transposase DDE domain APA07_RS02925 PF01012 Electron transfer flavoprotein domain APA07_RS02925 PF00766 Electron transfer flavoprotein FAD-binding domain APA07_RS02930 PF00171 Aldehyde dehydrogenase family APA07_RS02935 PF00732 GMC oxidoreductase APA07_RS02935 PF05199 GMC oxidoreductase APA07_RS02940 PF07690 Major Facilitator Superfamily APA07_RS02950 PF04966 Carbohydrate-selective porin, OprB family APA07_RS02980 PF03976 Polyphosphate kinase 2 (PPK2) APA07_RS02985 PF01384 Phosphate transporter family APA07_RS02995 PF00676 Dehydrogenase E1 component APA07_RS03000 PF02779 Transketolase, pyrimidine binding domain APA07_RS03000 PF02780 Transketolase, C-terminal domain APA07_RS03005 PF00364 Biotin-requiring enzyme APA07_RS03005 PF00561 alpha/beta hydrolase fold APA07_RS03010 PF00011 Hsp20/alpha crystallin family APA07_RS03025 PF07992 Pyridine nucleotide-disulphide oxidoreductase APA07_RS03035 PF02492 CobW/HypB/UreG, nucleotide-binding domain APA07_RS03035 PF07683 Cobalamin synthesis protein cobW C-terminal domain APA07_RS03040 PF00654 Voltage gated chloride channel APA07_RS03045 PF16916 Dimerisation domain of Zinc Transporter APA07_RS03045 PF01545 Cation efflux family APA07_RS03050 PF01545 Cation efflux family APA07_RS03060 PF00561 alpha/beta hydrolase fold APA07_RS03075 PF03169 OPT oligopeptide transporter protein APA07_RS03105 PF00899 ThiF family APA07_RS03115 PF00224 Pyruvate kinase, barrel domain APA07_RS03115 PF02887 Pyruvate kinase, alpha/beta domain APA07_RS03135 PF00679 Elongation factor G C-terminus APA07_RS03135 PF00009 Elongation factor Tu GTP binding domain APA07_RS03135 PF03144 Elongation factor Tu domain 2 APA07_RS03145 PF01266 FAD dependent oxidoreductase APA07_RS03150 PF07992 Pyridine nucleotide-disulphide oxidoreductase APA07_RS03155 PF00180 Isocitrate/isopropylmalate dehydrogenase APA07_RS03175 PF00155 Aminotransferase class I and II APA07_RS03180 PF00543 Nitrogen regulatory protein P-II APA07_RS03185 PF00120 Glutamine synthetase, catalytic domain APA07_RS03185 PF03951 Glutamine synthetase, beta-Grasp domain APA07_RS03195 PF01011 PQQ enzyme repeat APA07_RS03210 PF06421 GTP-binding protein LepA C-terminus APA07_RS03210 PF00009 Elongation factor Tu GTP binding domain APA07_RS03210 PF03144 Elongation factor Tu domain 2 APA07_RS03210 PF00679 Elongation factor G C-terminus APA07_RS03215 PF00561 alpha/beta hydrolase fold APA07_RS03220 PF00561 alpha/beta hydrolase fold APA07_RS03220 PF07021 Methionine biosynthesis protein MetW APA07_RS03225 PF00270 DEAD/DEAH box helicase APA07_RS03225 PF00271 Helicase conserved C-terminal domain APA07_RS03235 PF00484 Carbonic anhydrase APA07_RS03245 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) APA07_RS03250 PF01192 RNA polymerase Rpb6 APA07_RS03255 PF02824 TGS domain APA07_RS03255 PF13291 ACT domain APA07_RS03255 PF04607 Region found in RelA / SpoT proteins APA07_RS03260 PF01648 4'-phosphopantetheinyl transferase superfamily APA07_RS03265 PF10502 Signal peptidase, peptidase S26 APA07_RS03270 PF14622 Ribonuclease-III-like APA07_RS03270 PF00035 Double-stranded RNA binding motif APA07_RS03275 PF07650 KH domain APA07_RS03275 PF01926 50S ribosome-binding GTPase APA07_RS03280 PF00696 Amino acid kinase family APA07_RS03285 PF01765 Ribosome recycling factor APA07_RS03290 PF01255 Putative undecaprenyl diphosphate synthase APA07_RS03300 PF13288 DXP reductoisomerase C-terminal domain APA07_RS03300 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain APA07_RS03300 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase APA07_RS03305 PF17820 PDZ domain APA07_RS03305 PF02163 Peptidase family M50 APA07_RS03310 PF01103 Surface antigen APA07_RS03310 PF07244 Surface antigen variable number repeat APA07_RS03320 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD APA07_RS03320 PF00132 Bacterial transferase hexapeptide (six repeats) APA07_RS03325 PF07977 FabA-like domain APA07_RS03330 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 APA07_RS03330 PF00132 Bacterial transferase hexapeptide (six repeats) APA07_RS03335 PF06230 LpxI C-terminal domain APA07_RS03335 PF17930 LpxI N-terminal domain APA07_RS03340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily APA07_RS03350 PF00468 Ribosomal protein L34 APA07_RS03355 PF00825 Ribonuclease P APA07_RS03360 PF14849 YidC periplasmic domain APA07_RS03360 PF02096 60Kd inner membrane protein APA07_RS03365 PF01926 50S ribosome-binding GTPase APA07_RS03370 PF00696 Amino acid kinase family APA07_RS03375 PF14602 Hexapeptide repeat of succinyl-transferase APA07_RS03375 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal APA07_RS03375 PF00132 Bacterial transferase hexapeptide (six repeats) APA07_RS03380 PF01546 Peptidase family M20/M25/M40 APA07_RS03380 PF07687 Peptidase dimerisation domain APA07_RS03390 PF01416 tRNA pseudouridine synthase APA07_RS03395 PF02911 Formyl transferase, C-terminal domain APA07_RS03395 PF00551 Formyl transferase APA07_RS03400 PF01327 Polypeptide deformylase APA07_RS03405 PF00011 Hsp20/alpha crystallin family APA07_RS03415 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein APA07_RS03415 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus APA07_RS03425 PF03473 MOSC domain APA07_RS03425 PF03476 MOSC N-terminal beta barrel domain APA07_RS03425 PF00111 2Fe-2S iron-sulfur cluster binding domain APA07_RS03430 PF00005 ABC transporter APA07_RS03445 PF00571 CBS domain APA07_RS03445 PF01380 SIS domain APA07_RS03450 PF00570 HRDC domain APA07_RS03450 PF01612 3'-5' exonuclease APA07_RS03455 PF08032 RNA 2'-O ribose methyltransferase substrate binding APA07_RS03455 PF00588 SpoU rRNA Methylase family APA07_RS03465 PF00561 alpha/beta hydrolase fold APA07_RS03465 PF00106 short chain dehydrogenase APA07_RS03470 PF00625 Guanylate kinase APA07_RS03475 PF00294 pfkB family carbohydrate kinase APA07_RS03475 PF01467 Cytidylyltransferase-like APA07_RS03485 PF03796 DnaB-like helicase C terminal domain APA07_RS03485 PF00772 DnaB-like helicase N terminal domain APA07_RS03495 PF12795 Mechanosensitive ion channel porin domain APA07_RS03495 PF00924 Mechanosensitive ion channel APA07_RS03495 PF12794 Mechanosensitive ion channel inner membrane domain 1 APA07_RS03500 PF00005 ABC transporter APA07_RS03505 PF02405 Permease MlaE APA07_RS03515 PF18073 Rubredoxin metal binding domain APA07_RS03515 PF06745 KaiC APA07_RS03540 PF00324 Amino acid permease APA07_RS03550 PF01619 Proline dehydrogenase APA07_RS03550 PF00171 Aldehyde dehydrogenase family APA07_RS03550 PF18327 Proline utilization A proline dehydrogenase N-terminal domain APA07_RS03550 PF14850 DNA-binding domain of Proline dehydrogenase APA07_RS03565 PF00501 AMP-binding enzyme APA07_RS03565 PF13193 AMP-binding enzyme C-terminal domain APA07_RS03565 PF16177 Acetyl-coenzyme A synthetase N-terminus APA07_RS03595 PF01923 Cobalamin adenosyltransferase APA07_RS03610 PF02913 FAD linked oxidases, C-terminal domain APA07_RS03610 PF01565 FAD binding domain APA07_RS03620 PF03481 Putative GTP-binding controlling metal-binding APA07_RS03620 PF01300 Telomere recombination APA07_RS03625 PF00459 Inositol monophosphatase family APA07_RS03630 PF00883 Cytosol aminopeptidase family, catalytic domain APA07_RS03630 PF02789 Cytosol aminopeptidase family, N-terminal domain APA07_RS03640 PF00248 Aldo/keto reductase family APA07_RS03645 PF13180 PDZ domain APA07_RS03650 PF08482 ATP-dependent helicase C-terminal APA07_RS03650 PF00271 Helicase conserved C-terminal domain APA07_RS03650 PF04408 Helicase associated domain (HA2) APA07_RS03650 PF00270 DEAD/DEAH box helicase APA07_RS03660 PF01430 Hsp33 protein APA07_RS03670 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain APA07_RS03670 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain APA07_RS03675 PF00202 Aminotransferase class-III APA07_RS03690 PF02416 mttA/Hcf106 family APA07_RS03695 PF00596 Class II Aldolase and Adducin N-terminal domain APA07_RS03700 PF03079 ARD/ARD' family APA07_RS03710 PF01687 Riboflavin kinase APA07_RS03710 PF06574 FAD synthetase APA07_RS03715 PF08264 Anticodon-binding domain of tRNA APA07_RS03715 PF06827 Zinc finger found in FPG and IleRS APA07_RS03715 PF00133 tRNA synthetases class I (I, L, M and V) APA07_RS03720 PF01252 Signal peptidase (SPase) II APA07_RS03730 PF08676 MutL C terminal dimerisation domain APA07_RS03730 PF01119 DNA mismatch repair protein, C-terminal domain APA07_RS03735 PF00361 Proton-conducting membrane transporter APA07_RS03735 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus APA07_RS03740 PF00892 EamA-like transporter family APA07_RS03745 PF00204 DNA gyrase B APA07_RS03745 PF01751 Toprim domain APA07_RS03745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APA07_RS03745 PF00986 DNA gyrase B subunit, carboxyl terminus APA07_RS03760 PF02082 Transcriptional regulator APA07_RS03765 PF00291 Pyridoxal-phosphate dependent enzyme APA07_RS03770 PF00691 OmpA family APA07_RS03780 PF03572 Peptidase family S41 APA07_RS03780 PF13180 PDZ domain APA07_RS03785 PF00575 S1 RNA binding domain APA07_RS03785 PF00773 RNB domain APA07_RS03785 PF08206 Ribonuclease B OB domain APA07_RS03785 PF08461 Ribonuclease R winged-helix domain APA07_RS03785 PF17876 Cold shock domain APA07_RS03790 PF01131 DNA topoisomerase APA07_RS03790 PF01396 Topoisomerase DNA binding C4 zinc finger APA07_RS03790 PF13368 Topoisomerase C-terminal repeat APA07_RS03790 PF01751 Toprim domain APA07_RS03795 PF02481 DNA recombination-mediator protein A APA07_RS03795 PF17782 DprA winged helix domain APA07_RS03815 PF18255 DNA processing protein A sterile alpha motif domain APA07_RS03815 PF02481 DNA recombination-mediator protein A APA07_RS03820 PF02660 Glycerol-3-phosphate acyltransferase APA07_RS03825 PF01979 Amidohydrolase family APA07_RS03830 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain APA07_RS03830 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain APA07_RS03835 PF00749 tRNA synthetases class I (E and Q), catalytic domain APA07_RS03840 PF13567 Domain of unknown function (DUF4131) APA07_RS03840 PF03772 Competence protein APA07_RS03840 PF00753 Metallo-beta-lactamase superfamily APA07_RS03845 PF02627 Carboxymuconolactone decarboxylase family APA07_RS03850 PF03969 AFG1-like ATPase APA07_RS03855 PF16078 2-oxoglutarate dehydrogenase N-terminus APA07_RS03855 PF00676 Dehydrogenase E1 component APA07_RS03855 PF02779 Transketolase, pyrimidine binding domain APA07_RS03855 PF16870 2-oxoglutarate dehydrogenase C-terminal APA07_RS03860 PF02817 e3 binding domain APA07_RS03860 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) APA07_RS03860 PF00364 Biotin-requiring enzyme APA07_RS03865 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APA07_RS03865 PF07992 Pyridine nucleotide-disulphide oxidoreductase APA07_RS03880 PF05221 S-adenosyl-L-homocysteine hydrolase APA07_RS03880 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain APA07_RS03895 PF16123 Hydroxyacylglutathione hydrolase C-terminus APA07_RS03895 PF00753 Metallo-beta-lactamase superfamily APA07_RS03925 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit APA07_RS03930 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit APA07_RS03935 PF01066 CDP-alcohol phosphatidyltransferase APA07_RS03940 PF02666 Phosphatidylserine decarboxylase APA07_RS03945 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain APA07_RS03945 PF01411 tRNA synthetases class II (A) APA07_RS03945 PF02272 DHHA1 domain APA07_RS03955 PF00691 OmpA family APA07_RS03960 PF01761 3-dehydroquinate synthase APA07_RS03970 PF02899 Phage integrase, N-terminal SAM-like domain APA07_RS03970 PF00589 Phage integrase family APA07_RS03975 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit APA07_RS03980 PF00994 Probable molybdopterin binding domain APA07_RS03980 PF18146 Damage-inducible protein CinA KH domain APA07_RS03980 PF02464 Competence-damaged protein APA07_RS03985 PF01921 tRNA synthetases class I (K) APA07_RS04000 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ APA07_RS04005 PF00814 Glycoprotease family APA07_RS04010 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain APA07_RS04010 PF03900 Porphobilinogen deaminase, C-terminal domain APA07_RS04020 PF02556 Preprotein translocase subunit SecB APA07_RS04025 PF00934 PE family APA07_RS04025 PF00300 Histidine phosphatase superfamily (branch 1) APA07_RS04035 PF01555 DNA methylase APA07_RS04040 PF00034 Cytochrome c APA07_RS04040 PF03150 Di-haem cytochrome c peroxidase APA07_RS04045 PF01713 Smr domain APA07_RS04045 PF00488 MutS domain V APA07_RS04055 PF01218 Coproporphyrinogen III oxidase APA07_RS04060 PF02167 Cytochrome C1 family APA07_RS04060 PF00032 Cytochrome b(C-terminal)/b6/petD APA07_RS04060 PF00033 Cytochrome b/b6/petB APA07_RS04065 PF02167 Cytochrome C1 family APA07_RS04065 PF00032 Cytochrome b(C-terminal)/b6/petD APA07_RS04065 PF00033 Cytochrome b/b6/petB APA07_RS04070 PF01048 Phosphorylase superfamily APA07_RS04090 PF00881 Nitroreductase family APA07_RS04095 PF02423 Ornithine cyclodeaminase/mu-crystallin family APA07_RS04100 PF00171 Aldehyde dehydrogenase family APA07_RS04110 PF01527 Transposase APA07_RS04115 PF13333 Integrase core domain APA07_RS04115 PF13276 HTH-like domain APA07_RS04115 PF00665 Integrase core domain APA07_RS04150 PF00239 Resolvase, N terminal domain APA07_RS04165 PF02899 Phage integrase, N-terminal SAM-like domain APA07_RS04165 PF00589 Phage integrase family APA07_RS04170 PF00589 Phage integrase family APA07_RS04170 PF13356 Arm DNA-binding domain APA07_RS04230 PF01527 Transposase APA07_RS04240 PF13005 zinc-finger binding domain of transposase IS66 APA07_RS04240 PF03050 Transposase IS66 family APA07_RS04240 PF13007 Transposase C of IS166 homeodomain APA07_RS04240 PF13817 IS66 C-terminal element APA07_RS04245 PF13276 HTH-like domain APA07_RS04245 PF00665 Integrase core domain APA07_RS04245 PF13333 Integrase core domain APA07_RS04250 PF01527 Transposase APA07_RS04335 PF02548 Ketopantoate hydroxymethyltransferase APA07_RS04340 PF00724 NADH:flavin oxidoreductase / NADH oxidase family APA07_RS04345 PF01022 Bacterial regulatory protein, arsR family APA07_RS04350 PF08240 Alcohol dehydrogenase GroES-like domain APA07_RS04355 PF00089 Trypsin APA07_RS04360 PF16363 GDP-mannose 4,6 dehydratase APA07_RS04370 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain APA07_RS04370 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain APA07_RS04375 PF00206 Lyase APA07_RS04375 PF14698 Argininosuccinate lyase C-terminal APA07_RS04390 PF01488 Shikimate / quinate 5-dehydrogenase APA07_RS04390 PF18317 Shikimate 5'-dehydrogenase C-terminal domain APA07_RS04390 PF08501 Shikimate dehydrogenase substrate binding domain APA07_RS04395 PF01121 Dephospho-CoA kinase APA07_RS04400 PF00929 Exonuclease APA07_RS04410 PF13579 Glycosyl transferase 4-like domain APA07_RS04410 PF00534 Glycosyl transferases group 1 APA07_RS04420 PF00834 Ribulose-phosphate 3 epimerase family APA07_RS04425 PF01189 16S rRNA methyltransferase RsmB/F APA07_RS04425 PF01029 NusB family APA07_RS04430 PF00551 Formyl transferase APA07_RS04435 PF02769 AIR synthase related protein, C-terminal domain APA07_RS04435 PF00586 AIR synthase related protein, N-terminal domain APA07_RS04445 PF13089 Polyphosphate kinase N-terminal domain APA07_RS04445 PF17941 Polyphosphate kinase C-terminal domain 1 APA07_RS04445 PF13090 Polyphosphate kinase C-terminal domain 2 APA07_RS04445 PF02503 Polyphosphate kinase middle domain APA07_RS04450 PF02541 Ppx/GppA phosphatase family APA07_RS04465 PF00005 ABC transporter APA07_RS04485 PF17655 Inward rectifier potassium channel C-terminal domain APA07_RS04485 PF07885 Ion channel APA07_RS04490 PF04632 Fusaric acid resistance protein family APA07_RS04495 PF04632 Fusaric acid resistance protein family APA07_RS04515 PF03918 Cytochrome C biogenesis protein APA07_RS04520 PF08534 Redoxin APA07_RS04525 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal APA07_RS04525 PF01578 Cytochrome C assembly protein APA07_RS04530 PF03100 CcmE APA07_RS04535 PF01578 Cytochrome C assembly protein APA07_RS04565 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APA07_RS04565 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain APA07_RS04570 PF03588 Leucyl/phenylalanyl-tRNA protein transferase APA07_RS04595 PF08335 GlnD PII-uridylyltransferase APA07_RS04595 PF03710 Glutamate-ammonia ligase adenylyltransferase APA07_RS04600 PF00578 AhpC/TSA family APA07_RS04610 PF00083 Sugar (and other) transporter APA07_RS04620 PF02646 RmuC family APA07_RS04625 PF00072 Response regulator receiver domain APA07_RS04625 PF00486 Transcriptional regulatory protein, C terminal APA07_RS04630 PF00512 His Kinase A (phospho-acceptor) domain APA07_RS04630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APA07_RS04635 PF00873 AcrB/AcrD/AcrF family APA07_RS04640 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APA07_RS04645 PF02321 Outer membrane efflux protein APA07_RS04650 PF03946 Ribosomal protein L11, N-terminal domain APA07_RS04650 PF00298 Ribosomal protein L11, RNA binding domain APA07_RS04655 PF00687 Ribosomal protein L1p/L10e family APA07_RS04660 PF00466 Ribosomal protein L10 APA07_RS04665 PF00542 Ribosomal protein L7/L12 C-terminal domain APA07_RS04665 PF16320 Ribosomal protein L7/L12 dimerisation domain APA07_RS04670 PF04560 RNA polymerase Rpb2, domain 7 APA07_RS04670 PF04563 RNA polymerase beta subunit APA07_RS04670 PF04561 RNA polymerase Rpb2, domain 2 APA07_RS04670 PF04565 RNA polymerase Rpb2, domain 3 APA07_RS04670 PF10385 RNA polymerase beta subunit external 1 domain APA07_RS04670 PF00562 RNA polymerase Rpb2, domain 6 APA07_RS04675 PF04998 RNA polymerase Rpb1, domain 5 APA07_RS04675 PF05000 RNA polymerase Rpb1, domain 4 APA07_RS04675 PF04983 RNA polymerase Rpb1, domain 3 APA07_RS04675 PF00623 RNA polymerase Rpb1, domain 2 APA07_RS04675 PF04997 RNA polymerase Rpb1, domain 1 APA07_RS04680 PF00164 Ribosomal protein S12/S23 APA07_RS04685 PF00177 Ribosomal protein S7p/S5e APA07_RS04690 PF03144 Elongation factor Tu domain 2 APA07_RS04690 PF00009 Elongation factor Tu GTP binding domain APA07_RS04690 PF03143 Elongation factor Tu C-terminal domain APA07_RS04695 PF00338 Ribosomal protein S10p/S20e APA07_RS04700 PF00297 Ribosomal protein L3 APA07_RS04705 PF00573 Ribosomal protein L4/L1 family APA07_RS04710 PF00276 Ribosomal protein L23 APA07_RS04715 PF03947 Ribosomal Proteins L2, C-terminal domain APA07_RS04715 PF00181 Ribosomal Proteins L2, RNA binding domain APA07_RS04720 PF00203 Ribosomal protein S19 APA07_RS04725 PF00237 Ribosomal protein L22p/L17e APA07_RS04730 PF07650 KH domain APA07_RS04730 PF00189 Ribosomal protein S3, C-terminal domain APA07_RS04735 PF00252 Ribosomal protein L16p/L10e APA07_RS04740 PF00831 Ribosomal L29 protein APA07_RS04745 PF00366 Ribosomal protein S17 APA07_RS04750 PF00238 Ribosomal protein L14p/L23e APA07_RS04755 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 APA07_RS04760 PF00673 ribosomal L5P family C-terminus APA07_RS04760 PF00281 Ribosomal protein L5 APA07_RS04765 PF00253 Ribosomal protein S14p/S29e APA07_RS04770 PF00410 Ribosomal protein S8 APA07_RS04775 PF00347 Ribosomal protein L6 APA07_RS04780 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast APA07_RS04785 PF03719 Ribosomal protein S5, C-terminal domain APA07_RS04785 PF00333 Ribosomal protein S5, N-terminal domain APA07_RS04790 PF00327 Ribosomal protein L30p/L7e APA07_RS04795 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A APA07_RS04800 PF00344 SecY translocase APA07_RS04805 PF05191 Adenylate kinase, active site lid APA07_RS04810 PF00416 Ribosomal protein S13/S18 APA07_RS04815 PF00411 Ribosomal protein S11 APA07_RS04820 PF01000 RNA polymerase Rpb3/RpoA insert domain APA07_RS04820 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain APA07_RS04820 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain APA07_RS04825 PF01196 Ribosomal protein L17 APA07_RS04835 PF00528 Binding-protein-dependent transport system inner membrane component APA07_RS04840 PF00005 ABC transporter APA07_RS04855 PF02321 Outer membrane efflux protein APA07_RS04860 PF00873 AcrB/AcrD/AcrF family APA07_RS04865 PF00873 AcrB/AcrD/AcrF family APA07_RS04870 PF13533 Biotin-lipoyl like APA07_RS04875 PF07690 Major Facilitator Superfamily APA07_RS04880 PF05532 CsbD-like APA07_RS04885 PF01351 Ribonuclease HII APA07_RS04890 PF01555 DNA methylase APA07_RS04890 PF18755 Restriction Enzyme Adenine Methylase Associated APA07_RS04915 PF07726 ATPase family associated with various cellular activities (AAA) APA07_RS04915 PF17863 AAA lid domain APA07_RS04925 PF13735 tRNA nucleotidyltransferase domain 2 putative APA07_RS04925 PF12627 Probable RNA and SrmB- binding site of polymerase A APA07_RS04925 PF01743 Poly A polymerase head domain APA07_RS04930 PF00005 ABC transporter APA07_RS04930 PF00664 ABC transporter transmembrane region APA07_RS04935 PF13533 Biotin-lipoyl like APA07_RS04940 PF07690 Major Facilitator Superfamily APA07_RS04945 PF00293 NUDIX domain APA07_RS04955 PF13180 PDZ domain APA07_RS04955 PF03572 Peptidase family S41 APA07_RS04965 PF06415 BPG-independent PGAM N-terminus (iPGM_N) APA07_RS04965 PF01676 Metalloenzyme superfamily APA07_RS04970 PF13291 ACT domain APA07_RS04970 PF00291 Pyridoxal-phosphate dependent enzyme APA07_RS04975 PF03449 Transcription elongation factor, N-terminal APA07_RS04975 PF01272 Transcription elongation factor, GreA/GreB, C-term APA07_RS04980 PF02142 MGS-like domain APA07_RS04980 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain APA07_RS04980 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain APA07_RS04985 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain APA07_RS04985 PF00117 Glutamine amidotransferase class-I APA07_RS04995 PF13662 Toprim domain APA07_RS04995 PF10410 DnaB-helicase binding domain of primase APA07_RS04995 PF08278 DNA primase DnaG DnaB-binding APA07_RS04995 PF08275 DNA primase catalytic core, N-terminal domain APA07_RS04995 PF01807 CHC2 zinc finger APA07_RS05000 PF04546 Sigma-70, non-essential region APA07_RS05000 PF04539 Sigma-70 region 3 APA07_RS05000 PF04542 Sigma-70 region 2 APA07_RS05000 PF03979 Sigma-70 factor, region 1.1 APA07_RS05000 PF04545 Sigma-70, region 4 APA07_RS05000 PF00140 Sigma-70 factor, region 1.2 APA07_RS05010 PF01250 Ribosomal protein S6 APA07_RS05015 PF01084 Ribosomal protein S18 APA07_RS05020 PF03948 Ribosomal protein L9, C-terminal domain APA07_RS05020 PF01281 Ribosomal protein L9, N-terminal domain APA07_RS05030 PF00398 Ribosomal RNA adenine dimethylase APA07_RS05035 PF00639 PPIC-type PPIASE domain APA07_RS05035 PF09312 SurA N-terminal domain APA07_RS05040 PF04453 LPS transport system D APA07_RS05060 PF00664 ABC transporter transmembrane region APA07_RS05060 PF00005 ABC transporter APA07_RS05065 PF00392 Bacterial regulatory proteins, gntR family APA07_RS05065 PF07729 FCD domain APA07_RS05070 PF03776 Septum formation topological specificity factor MinE APA07_RS05075 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain APA07_RS05080 PF05209 Septum formation inhibitor MinC, N-terminal domain APA07_RS05080 PF03775 Septum formation inhibitor MinC, C-terminal domain APA07_RS05085 PF00043 Glutathione S-transferase, C-terminal domain APA07_RS05085 PF13417 Glutathione S-transferase, N-terminal domain APA07_RS05095 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APA07_RS05110 PF02559 CarD-like/TRCF domain APA07_RS05115 PF01062 Bestrophin, RFP-TM, chloride channel APA07_RS05120 PF00756 Putative esterase APA07_RS05135 PF00005 ABC transporter APA07_RS05150 PF08448 PAS fold APA07_RS05150 PF00512 His Kinase A (phospho-acceptor) domain APA07_RS05150 PF13188 PAS domain APA07_RS05150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APA07_RS05150 PF00072 Response regulator receiver domain APA07_RS05155 PF00512 His Kinase A (phospho-acceptor) domain APA07_RS05155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APA07_RS05155 PF08448 PAS fold APA07_RS05155 PF13188 PAS domain APA07_RS05155 PF00072 Response regulator receiver domain APA07_RS05160 PF00227 Proteasome subunit APA07_RS05165 PF00004 ATPase family associated with various cellular activities (AAA) APA07_RS05165 PF07724 AAA domain (Cdc48 subfamily) APA07_RS05165 PF10431 C-terminal, D2-small domain, of ClpB protein APA07_RS05170 PF02657 Fe-S metabolism associated domain APA07_RS05175 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase APA07_RS05180 PF00111 2Fe-2S iron-sulfur cluster binding domain APA07_RS05180 PF01799 [2Fe-2S] binding domain APA07_RS05185 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase APA07_RS05185 PF00034 Cytochrome c APA07_RS05185 PF13442 Cytochrome C oxidase, cbb3-type, subunit III APA07_RS05190 PF08125 Mannitol dehydrogenase C-terminal domain APA07_RS05190 PF01232 Mannitol dehydrogenase Rossmann domain APA07_RS05195 PF01632 Ribosomal protein L35 APA07_RS05200 PF00453 Ribosomal protein L20 APA07_RS05205 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain APA07_RS05205 PF01409 tRNA synthetases class II core domain (F) APA07_RS05210 PF01588 Putative tRNA binding domain APA07_RS05210 PF03147 Ferredoxin-fold anticodon binding domain APA07_RS05210 PF03483 B3/4 domain APA07_RS05210 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain APA07_RS05210 PF03484 tRNA synthetase B5 domain APA07_RS05215 PF12849 PBP superfamily domain APA07_RS05220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APA07_RS05230 PF00999 Sodium/hydrogen exchanger family APA07_RS05240 PF01479 S4 domain APA07_RS05240 PF00163 Ribosomal protein S4/S9 N-terminal domain APA07_RS05245 PF03144 Elongation factor Tu domain 2 APA07_RS05245 PF16658 Class II release factor RF3, C-terminal domain APA07_RS05245 PF00009 Elongation factor Tu GTP binding domain APA07_RS05255 PF18324 Hypothetical protein TT1725 APA07_RS05255 PF00180 Isocitrate/isopropylmalate dehydrogenase APA07_RS05260 PF01321 Creatinase/Prolidase N-terminal domain APA07_RS05260 PF00557 Metallopeptidase family M24 APA07_RS05270 PF13361 UvrD-like helicase C-terminal domain APA07_RS05270 PF00580 UvrD/REP helicase N-terminal domain APA07_RS05275 PF04002 RadC-like JAB domain APA07_RS05280 PF04002 RadC-like JAB domain APA07_RS05285 PF02222 ATP-grasp domain APA07_RS05285 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain APA07_RS05290 PF00731 AIR carboxylase APA07_RS05310 PF00011 Hsp20/alpha crystallin family APA07_RS05315 PF01197 Ribosomal protein L31 APA07_RS05320 PF01741 Large-conductance mechanosensitive channel, MscL APA07_RS05330 PF07549 SecD/SecF GG Motif APA07_RS05330 PF02355 Protein export membrane protein APA07_RS05335 PF07549 SecD/SecF GG Motif APA07_RS05335 PF02355 Protein export membrane protein APA07_RS05345 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APA07_RS05345 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APA07_RS05350 PF03477 ATP cone domain APA07_RS05350 PF02867 Ribonucleotide reductase, barrel domain APA07_RS05350 PF00317 Ribonucleotide reductase, all-alpha domain APA07_RS05355 PF00268 Ribonucleotide reductase, small chain APA07_RS05365 PF00348 Polyprenyl synthetase APA07_RS05370 PF01177 Asp/Glu/Hydantoin racemase APA07_RS05375 PF00156 Phosphoribosyl transferase domain APA07_RS05385 PF00285 Citrate synthase, C-terminal domain APA07_RS05395 PF02153 Prephenate dehydrogenase APA07_RS05395 PF01817 Chorismate mutase type II APA07_RS05405 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain APA07_RS05405 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain APA07_RS05415 PF02463 RecF/RecN/SMC N terminal domain APA07_RS05420 PF13462 Thioredoxin APA07_RS05425 PF00571 CBS domain APA07_RS05425 PF03471 Transporter associated domain APA07_RS05430 PF02130 Uncharacterized protein family UPF0054 APA07_RS05435 PF02562 PhoH-like protein APA07_RS05440 PF04055 Radical SAM superfamily APA07_RS05440 PF01938 TRAM domain APA07_RS05440 PF00919 Uncharacterized protein family UPF0004 APA07_RS05450 PF01103 Surface antigen APA07_RS05450 PF07244 Surface antigen variable number repeat APA07_RS05450 PF17243 POTRA domain TamA domain 1 APA07_RS05465 PF01244 Membrane dipeptidase (Peptidase family M19) APA07_RS05470 PF02151 UvrB/uvrC motif APA07_RS05470 PF08459 UvrC Helix-hairpin-helix N-terminal APA07_RS05470 PF12826 Helix-hairpin-helix motif APA07_RS05470 PF01541 GIY-YIG catalytic domain APA07_RS05475 PF01066 CDP-alcohol phosphatidyltransferase APA07_RS05485 PF02597 ThiS family APA07_RS05490 PF02391 MoaE protein APA07_RS05495 PF00202 Aminotransferase class-III APA07_RS05500 PF00155 Aminotransferase class I and II APA07_RS05510 PF13649 Methyltransferase domain APA07_RS05515 PF00717 Peptidase S24-like APA07_RS05515 PF01726 LexA DNA binding domain APA07_RS05520 PF00994 Probable molybdopterin binding domain APA07_RS05520 PF03453 MoeA N-terminal region (domain I and II) APA07_RS05520 PF03454 MoeA C-terminal region (domain IV) APA07_RS05525 PF00471 Ribosomal protein L33 APA07_RS05535 PF03952 Enolase, N-terminal domain APA07_RS05535 PF00113 Enolase, C-terminal TIM barrel domain APA07_RS05545 PF01266 FAD dependent oxidoreductase APA07_RS05555 PF05690 Thiazole biosynthesis protein ThiG APA07_RS05560 PF02581 Thiamine monophosphate synthase APA07_RS05565 PF17191 RecG wedge domain APA07_RS05565 PF00271 Helicase conserved C-terminal domain APA07_RS05565 PF00270 DEAD/DEAH box helicase APA07_RS05570 PF03937 Flavinator of succinate dehydrogenase APA07_RS05575 PF00271 Helicase conserved C-terminal domain APA07_RS05575 PF02559 CarD-like/TRCF domain APA07_RS05575 PF00270 DEAD/DEAH box helicase APA07_RS05575 PF17757 UvrB interaction domain APA07_RS05575 PF03461 TRCF domain APA07_RS05590 PF13593 SBF-like CPA transporter family (DUF4137) APA07_RS05595 PF00282 Pyridoxal-dependent decarboxylase conserved domain APA07_RS05600 PF11775 Cobalamin biosynthesis protein CobT VWA domain APA07_RS05600 PF06213 Cobalamin biosynthesis protein CobT APA07_RS05605 PF08406 CbbQ/NirQ/NorQ C-terminal APA07_RS05605 PF12556 Cobaltochelatase CobS subunit N terminal APA07_RS05605 PF07728 AAA domain (dynein-related subfamily) APA07_RS05610 PF00684 DnaJ central domain APA07_RS05610 PF00226 DnaJ domain APA07_RS05610 PF01556 DnaJ C terminal domain APA07_RS05615 PF01722 BolA-like protein APA07_RS05625 PF03099 Biotin/lipoate A/B protein ligase family APA07_RS05635 PF00483 Nucleotidyl transferase APA07_RS05640 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III APA07_RS05640 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II APA07_RS05640 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I APA07_RS05640 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain APA07_RS05645 PF04055 Radical SAM superfamily APA07_RS05645 PF06463 Molybdenum Cofactor Synthesis C APA07_RS05650 PF08241 Methyltransferase domain APA07_RS05655 PF00156 Phosphoribosyl transferase domain APA07_RS05660 PF00462 Glutaredoxin APA07_RS05675 PF10282 Lactonase, 7-bladed beta-propeller APA07_RS05685 PF00696 Amino acid kinase family APA07_RS05685 PF13840 ACT domain APA07_RS05685 PF01842 ACT domain APA07_RS05690 PF03060 Nitronate monooxygenase APA07_RS05700 PF04551 GcpE protein APA07_RS05705 PF13393 Histidyl-tRNA synthetase APA07_RS05705 PF03129 Anticodon binding domain APA07_RS05710 PF03462 PCRF domain APA07_RS05710 PF00472 RF-1 domain APA07_RS05720 PF13847 Methyltransferase domain APA07_RS05720 PF17827 PrmC N-terminal domain APA07_RS05740 PF02673 Bacitracin resistance protein BacA APA07_RS05745 PF13520 Amino acid permease APA07_RS05760 PF13406 Transglycosylase SLT domain APA07_RS05765 PF03330 Lytic transglycolase APA07_RS05765 PF05036 Sporulation related domain APA07_RS05770 PF07943 Penicillin-binding protein 5, C-terminal domain APA07_RS05770 PF00768 D-alanyl-D-alanine carboxypeptidase APA07_RS05775 PF02223 Thymidylate kinase APA07_RS05785 PF08264 Anticodon-binding domain of tRNA APA07_RS05785 PF09334 tRNA synthetases class I (M) APA07_RS05790 PF01026 TatD related DNase APA07_RS05805 PF01243 Pyridoxamine 5'-phosphate oxidase APA07_RS05805 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region APA07_RS05815 PF01264 Chorismate synthase APA07_RS05820 PF02566 OsmC-like protein APA07_RS05825 PF06039 Malate:quinone oxidoreductase (Mqo) APA07_RS05835 PF06508 Queuosine biosynthesis protein QueC APA07_RS05845 PF04055 Radical SAM superfamily APA07_RS05845 PF06968 Biotin and Thiamin Synthesis associated domain APA07_RS05855 PF01507 Phosphoadenosine phosphosulfate reductase family APA07_RS05860 PF01507 Phosphoadenosine phosphosulfate reductase family APA07_RS05865 PF00009 Elongation factor Tu GTP binding domain APA07_RS05875 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain APA07_RS05875 PF01077 Nitrite and sulphite reductase 4Fe-4S domain APA07_RS05885 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) APA07_RS05890 PF02606 Tetraacyldisaccharide-1-P 4'-kinase APA07_RS05900 PF00459 Inositol monophosphatase family APA07_RS05910 PF02618 YceG-like family APA07_RS05915 PF02801 Beta-ketoacyl synthase, C-terminal domain APA07_RS05915 PF00109 Beta-ketoacyl synthase, N-terminal domain APA07_RS05920 PF00550 Phosphopantetheine attachment site APA07_RS05930 PF00698 Acyl transferase domain APA07_RS05955 PF02796 Helix-turn-helix domain of resolvase APA07_RS05955 PF00239 Resolvase, N terminal domain APA07_RS05960 PF09299 Mu transposase, C-terminal APA07_RS05960 PF00665 Integrase core domain APA07_RS05975 PF00313 'Cold-shock' DNA-binding domain APA07_RS05980 PF01668 SmpB protein APA07_RS05985 PF00701 Dihydrodipicolinate synthetase family APA07_RS05990 PF01842 ACT domain APA07_RS05990 PF00800 Prephenate dehydratase APA07_RS05990 PF01817 Chorismate mutase type II APA07_RS05995 PF02348 Cytidylyltransferase APA07_RS06000 PF00034 Cytochrome c APA07_RS06005 PF00459 Inositol monophosphatase family APA07_RS06010 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APA07_RS06010 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain APA07_RS06015 PF01078 Magnesium chelatase, subunit ChlI APA07_RS06015 PF13335 Magnesium chelatase, subunit ChlI C-terminal APA07_RS06020 PF01053 Cys/Met metabolism PLP-dependent enzyme APA07_RS06025 PF00581 Rhodanese-like domain APA07_RS06030 PF01594 AI-2E family transporter APA07_RS06040 PF13091 PLD-like domain APA07_RS06040 PF13396 Phospholipase_D-nuclease N-terminal APA07_RS06045 PF02021 Uncharacterised protein family UPF0102 APA07_RS06055 PF00462 Glutaredoxin APA07_RS06060 PF01722 BolA-like protein APA07_RS06065 PF02769 AIR synthase related protein, C-terminal domain APA07_RS06065 PF00586 AIR synthase related protein, N-terminal domain APA07_RS06065 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain APA07_RS06080 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase APA07_RS06085 PF01259 SAICAR synthetase APA07_RS06090 PF10397 Adenylosuccinate lyase C-terminus APA07_RS06090 PF00206 Lyase APA07_RS06095 PF03741 Integral membrane protein TerC family APA07_RS06100 PF01464 Transglycosylase SLT domain APA07_RS06100 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain APA07_RS06110 PF02464 Competence-damaged protein APA07_RS06125 PF04055 Radical SAM superfamily APA07_RS06130 PF07992 Pyridine nucleotide-disulphide oxidoreductase APA07_RS06130 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APA07_RS06135 PF00364 Biotin-requiring enzyme APA07_RS06135 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) APA07_RS06135 PF02817 e3 binding domain APA07_RS06140 PF02780 Transketolase, C-terminal domain APA07_RS06140 PF00364 Biotin-requiring enzyme APA07_RS06140 PF02779 Transketolase, pyrimidine binding domain APA07_RS06145 PF00676 Dehydrogenase E1 component APA07_RS06150 PF01967 MoaC family APA07_RS06155 PF00218 Indole-3-glycerol phosphate synthase APA07_RS06160 PF02885 Glycosyl transferase family, helical bundle domain APA07_RS06160 PF00591 Glycosyl transferase family, a/b domain APA07_RS06165 PF00117 Glutamine amidotransferase class-I APA07_RS06170 PF00425 chorismate binding enzyme APA07_RS06170 PF04715 Anthranilate synthase component I, N terminal region APA07_RS06180 PF00121 Triosephosphate isomerase APA07_RS06190 PF00117 Glutamine amidotransferase class-I APA07_RS06190 PF06418 CTP synthase N-terminus APA07_RS06195 PF00793 DAHP synthetase I family APA07_RS06200 PF01751 Toprim domain APA07_RS06200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APA07_RS06200 PF00986 DNA gyrase B subunit, carboxyl terminus APA07_RS06200 PF00204 DNA gyrase B APA07_RS06205 PF02463 RecF/RecN/SMC N terminal domain APA07_RS06210 PF00712 DNA polymerase III beta subunit, N-terminal domain APA07_RS06210 PF02768 DNA polymerase III beta subunit, C-terminal domain APA07_RS06210 PF02767 DNA polymerase III beta subunit, central domain APA07_RS06215 PF00308 Bacterial dnaA protein APA07_RS06215 PF08299 Bacterial dnaA protein helix-turn-helix APA07_RS06215 PF11638 DnaA N-terminal domain APA07_RS06220 PF01649 Ribosomal protein S20 APA07_RS06225 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain APA07_RS06225 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain APA07_RS06225 PF06827 Zinc finger found in FPG and IleRS APA07_RS06230 PF01209 ubiE/COQ5 methyltransferase family APA07_RS06235 PF04127 DNA / pantothenate metabolism flavoprotein APA07_RS06235 PF02441 Flavoprotein APA07_RS06240 PF00692 dUTPase APA07_RS06245 PF00528 Binding-protein-dependent transport system inner membrane component APA07_RS06250 PF00005 ABC transporter APA07_RS06255 PF01625 Peptide methionine sulfoxide reductase APA07_RS06260 PF08264 Anticodon-binding domain of tRNA APA07_RS06260 PF00133 tRNA synthetases class I (I, L, M and V) APA07_RS06260 PF10458 Valyl tRNA synthetase tRNA binding arm APA07_RS06270 PF02321 Outer membrane efflux protein APA07_RS06310 PF00586 AIR synthase related protein, N-terminal domain APA07_RS06310 PF02769 AIR synthase related protein, C-terminal domain APA07_RS06315 PF01029 NusB family APA07_RS06320 PF03477 ATP cone domain APA07_RS06330 PF00370 FGGY family of carbohydrate kinases, N-terminal domain APA07_RS06330 PF02782 FGGY family of carbohydrate kinases, C-terminal domain APA07_RS06335 PF00230 Major intrinsic protein APA07_RS06340 PF01266 FAD dependent oxidoreductase APA07_RS06340 PF16901 C-terminal domain of alpha-glycerophosphate oxidase APA07_RS06345 PF00455 DeoR C terminal sensor domain APA07_RS06345 PF08220 DeoR-like helix-turn-helix domain APA07_RS06350 PF16124 RecQ zinc-binding APA07_RS06350 PF00270 DEAD/DEAH box helicase APA07_RS06350 PF09382 RQC domain APA07_RS06350 PF00570 HRDC domain APA07_RS06350 PF00271 Helicase conserved C-terminal domain APA07_RS06360 PF00005 ABC transporter APA07_RS06360 PF00664 ABC transporter transmembrane region APA07_RS06365 PF00005 ABC transporter APA07_RS06365 PF00664 ABC transporter transmembrane region APA07_RS06370 PF12282 Signal transduction histidine kinase APA07_RS06370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APA07_RS06370 PF07568 Histidine kinase APA07_RS06380 PF08281 Sigma-70, region 4 APA07_RS06380 PF04542 Sigma-70 region 2 APA07_RS06385 PF04542 Sigma-70 region 2 APA07_RS06385 PF08281 Sigma-70, region 4 APA07_RS06390 PF00072 Response regulator receiver domain APA07_RS06395 PF00005 ABC transporter APA07_RS06395 PF16326 ABC transporter C-terminal domain APA07_RS06400 PF01204 Trehalase APA07_RS06405 PF08240 Alcohol dehydrogenase GroES-like domain APA07_RS06405 PF00107 Zinc-binding dehydrogenase APA07_RS06410 PF03831 PhnA domain APA07_RS06410 PF08274 PhnA Zinc-Ribbon APA07_RS06425 PF02567 Phenazine biosynthesis-like protein APA07_RS06430 PF01979 Amidohydrolase family APA07_RS06445 PF00005 ABC transporter APA07_RS06460 PF01979 Amidohydrolase family APA07_RS06470 PF01546 Peptidase family M20/M25/M40 APA07_RS06470 PF07687 Peptidase dimerisation domain APA07_RS06475 PF00266 Aminotransferase class-V APA07_RS06490 PF01425 Amidase APA07_RS06500 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase APA07_RS06500 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain APA07_RS06505 PF01799 [2Fe-2S] binding domain APA07_RS06505 PF00111 2Fe-2S iron-sulfur cluster binding domain APA07_RS06510 PF00860 Permease family APA07_RS06515 PF00576 HIUase/Transthyretin family APA07_RS06530 PF13454 FAD-NAD(P)-binding APA07_RS06540 PF01979 Amidohydrolase family APA07_RS06550 PF02472 Biopolymer transport protein ExbD/TolR APA07_RS06555 PF02472 Biopolymer transport protein ExbD/TolR APA07_RS06560 PF01618 MotA/TolQ/ExbB proton channel family APA07_RS06575 PF13533 Biotin-lipoyl like APA07_RS06580 PF00005 ABC transporter APA07_RS06595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APA07_RS06595 PF03466 LysR substrate binding domain APA07_RS06600 PF03601 Conserved hypothetical protein 698 APA07_RS06610 PF13249 Squalene-hopene cyclase N-terminal domain APA07_RS06610 PF13243 Squalene-hopene cyclase C-terminal domain APA07_RS06615 PF17754 MftR C-terminal domain APA07_RS06615 PF00440 Bacterial regulatory proteins, tetR family APA07_RS06630 PF06965 Na+/H+ antiporter 1 APA07_RS06635 PF00171 Aldehyde dehydrogenase family APA07_RS06640 PF00724 NADH:flavin oxidoreductase / NADH oxidase family APA07_RS06645 PF01638 HxlR-like helix-turn-helix APA07_RS06650 PF00199 Catalase APA07_RS06650 PF06628 Catalase-related immune-responsive APA07_RS06650 PF18011 C-terminal domain found in long catalases APA07_RS06655 PF00472 RF-1 domain APA07_RS06670 PF13382 Adenine deaminase C-terminal domain APA07_RS06670 PF01979 Amidohydrolase family APA07_RS06675 PF00583 Acetyltransferase (GNAT) family APA07_RS06680 PF08543 Phosphomethylpyrimidine kinase APA07_RS06695 PF07715 TonB-dependent Receptor Plug Domain APA07_RS06695 PF00593 TonB dependent receptor APA07_RS06705 PF06472 ABC transporter transmembrane region 2 APA07_RS06705 PF00005 ABC transporter APA07_RS06720 PF00012 Hsp70 protein APA07_RS06725 PF02321 Outer membrane efflux protein APA07_RS06730 PF00873 AcrB/AcrD/AcrF family APA07_RS06760 PF07690 Major Facilitator Superfamily APA07_RS06765 PF04909 Amidohydrolase APA07_RS06790 PF04073 Aminoacyl-tRNA editing domain APA07_RS06795 PF07690 Major Facilitator Superfamily APA07_RS06810 PF02472 Biopolymer transport protein ExbD/TolR APA07_RS06815 PF01618 MotA/TolQ/ExbB proton channel family APA07_RS06830 PF13340 Putative transposase of IS4/5 family (DUF4096) APA07_RS06845 PF07715 TonB-dependent Receptor Plug Domain APA07_RS06845 PF00593 TonB dependent receptor APA07_RS06850 PF01609 Transposase DDE domain APA07_RS06855 PF00593 TonB dependent receptor APA07_RS06855 PF07715 TonB-dependent Receptor Plug Domain APA07_RS06865 PF04542 Sigma-70 region 2 APA07_RS06865 PF08281 Sigma-70, region 4 APA07_RS06865 PF12680 SnoaL-like domain APA07_RS06870 PF00593 TonB dependent receptor APA07_RS06870 PF07715 TonB-dependent Receptor Plug Domain APA07_RS06885 PF04542 Sigma-70 region 2 APA07_RS06885 PF04545 Sigma-70, region 4 APA07_RS06885 PF04539 Sigma-70 region 3 APA07_RS06890 PF09084 NMT1/THI5 like APA07_RS06895 PF00005 ABC transporter APA07_RS06900 PF00528 Binding-protein-dependent transport system inner membrane component APA07_RS06910 PF02668 Taurine catabolism dioxygenase TauD, TfdA family APA07_RS06930 PF13340 Putative transposase of IS4/5 family (DUF4096) APA07_RS06940 PF07690 Major Facilitator Superfamily APA07_RS06955 PF07690 Major Facilitator Superfamily APA07_RS06965 PF07690 Major Facilitator Superfamily APA07_RS06970 PF03466 LysR substrate binding domain APA07_RS06970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APA07_RS06975 PF00920 Dehydratase family APA07_RS06980 PF03328 HpcH/HpaI aldolase/citrate lyase family APA07_RS06985 PF13382 Adenine deaminase C-terminal domain APA07_RS06985 PF01979 Amidohydrolase family APA07_RS06995 PF01979 Amidohydrolase family APA07_RS07000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APA07_RS07005 PF00465 Iron-containing alcohol dehydrogenase APA07_RS07010 PF00083 Sugar (and other) transporter APA07_RS07015 PF00171 Aldehyde dehydrogenase family APA07_RS07025 PF00528 Binding-protein-dependent transport system inner membrane component APA07_RS07030 PF00005 ABC transporter APA07_RS07035 PF01402 Ribbon-helix-helix protein, copG family APA07_RS07035 PF08753 NikR C terminal nickel binding domain APA07_RS07045 PF09347 Domain of unknown function (DUF1989) APA07_RS07050 PF00289 Biotin carboxylase, N-terminal domain APA07_RS07050 PF00364 Biotin-requiring enzyme APA07_RS07050 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain APA07_RS07050 PF02785 Biotin carboxylase C-terminal domain APA07_RS07055 PF01425 Amidase APA07_RS07060 PF07859 alpha/beta hydrolase fold APA07_RS07065 PF13195 Protein of unknown function (DUF4011) APA07_RS07065 PF13087 AAA domain APA07_RS07065 PF13086 AAA domain APA07_RS07065 PF13195 Protein of unknown function (DUF4011) APA07_RS07065 PF13087 AAA domain APA07_RS07065 PF13086 AAA domain APA07_RS07075 PF07715 TonB-dependent Receptor Plug Domain APA07_RS07075 PF00593 TonB dependent receptor APA07_RS07085 PF07715 TonB-dependent Receptor Plug Domain APA07_RS07085 PF00593 TonB dependent receptor APA07_RS07100 PF13340 Putative transposase of IS4/5 family (DUF4096) APA07_RS07120 PF00296 Luciferase-like monooxygenase APA07_RS07130 PF01613 Flavin reductase like domain APA07_RS07145 PF00296 Luciferase-like monooxygenase APA07_RS07150 PF00296 Luciferase-like monooxygenase APA07_RS07165 PF00881 Nitroreductase family APA07_RS07200 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) APA07_RS07200 PF11867 Domain of unknown function (DUF3387) APA07_RS07200 PF18766 SWI2/SNF2 ATPase APA07_RS07210 PF18766 SWI2/SNF2 ATPase APA07_RS07210 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) APA07_RS07210 PF11867 Domain of unknown function (DUF3387) APA07_RS07230 PF05717 IS66 Orf2 like protein APA07_RS07235 PF13817 IS66 C-terminal element APA07_RS07235 PF03050 Transposase IS66 family APA07_RS07235 PF13007 Transposase C of IS166 homeodomain APA07_RS07235 PF13005 zinc-finger binding domain of transposase IS66 APA07_RS07245 PF13007 Transposase C of IS166 homeodomain APA07_RS07245 PF13817 IS66 C-terminal element APA07_RS07245 PF03050 Transposase IS66 family APA07_RS07245 PF13005 zinc-finger binding domain of transposase IS66 APA07_RS07255 PF01527 Transposase APA07_RS07290 PF17755 UvrA DNA-binding domain APA07_RS07295 PF00375 Sodium:dicarboxylate symporter family APA07_RS07300 PF05724 Thiopurine S-methyltransferase (TPMT) APA07_RS07305 PF04399 Glutaredoxin 2, C terminal domain APA07_RS07305 PF13417 Glutathione S-transferase, N-terminal domain APA07_RS07310 PF07690 Major Facilitator Superfamily APA07_RS07315 PF01888 CbiD APA07_RS07320 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APA07_RS07330 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APA07_RS07335 PF02571 Precorrin-6x reductase CbiJ/CobK APA07_RS07340 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APA07_RS07345 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APA07_RS07350 PF02570 Precorrin-8X methylmutase APA07_RS07355 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain APA07_RS07365 PF00206 Lyase APA07_RS07365 PF10415 Fumarase C C-terminus APA07_RS07375 PF02954 Bacterial regulatory protein, Fis family APA07_RS07375 PF00158 Sigma-54 interaction domain APA07_RS07375 PF02830 V4R domain APA07_RS07375 PF06505 Activator of aromatic catabolism APA07_RS07385 PF01011 PQQ enzyme repeat APA07_RS07415 PF01594 AI-2E family transporter APA07_RS07425 PF00871 Acetokinase family APA07_RS07430 PF01515 Phosphate acetyl/butaryl transferase APA07_RS07435 PF01070 FMN-dependent dehydrogenase APA07_RS07440 PF10371 Domain of unknown function APA07_RS07440 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II APA07_RS07440 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase APA07_RS07440 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg APA07_RS07440 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APA07_RS07445 PF07992 Pyridine nucleotide-disulphide oxidoreductase APA07_RS07445 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster APA07_RS07460 PF02659 Putative manganese efflux pump APA07_RS07465 PF02798 Glutathione S-transferase, N-terminal domain APA07_RS07465 PF14497 Glutathione S-transferase, C-terminal domain APA07_RS07470 PF02634 FdhD/NarQ family APA07_RS07475 PF12804 MobA-like NTP transferase domain APA07_RS07480 PF03205 Molybdopterin guanine dinucleotide synthesis protein B APA07_RS07485 PF03453 MoeA N-terminal region (domain I and II) APA07_RS07485 PF00994 Probable molybdopterin binding domain APA07_RS07485 PF03454 MoeA C-terminal region (domain IV) APA07_RS07490 PF04216 Protein involved in formate dehydrogenase formation APA07_RS07495 PF01292 Prokaryotic cytochrome b561 APA07_RS07500 PF13247 4Fe-4S dicluster domain APA07_RS07500 PF09163 Formate dehydrogenase N, transmembrane APA07_RS07505 PF01568 Molydopterin dinucleotide binding domain APA07_RS07505 PF00384 Molybdopterin oxidoreductase APA07_RS07505 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APA07_RS07515 PF02541 Ppx/GppA phosphatase family APA07_RS07520 PF01728 FtsJ-like methyltransferase APA07_RS07525 PF00480 ROK family APA07_RS07530 PF01206 Sulfurtransferase TusA APA07_RS07535 PF02609 Exonuclease VII small subunit APA07_RS07540 PF00348 Polyprenyl synthetase APA07_RS07545 PF02780 Transketolase, C-terminal domain APA07_RS07545 PF02779 Transketolase, pyrimidine binding domain APA07_RS07545 PF13292 1-deoxy-D-xylulose-5-phosphate synthase APA07_RS07550 PF01479 S4 domain APA07_RS07550 PF01728 FtsJ-like methyltransferase APA07_RS07560 PF04055 Radical SAM superfamily APA07_RS07565 PF00764 Arginosuccinate synthase APA07_RS07570 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase APA07_RS07570 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase APA07_RS07580 PF00579 tRNA synthetases class I (W and Y) APA07_RS07595 PF00486 Transcriptional regulatory protein, C terminal APA07_RS07595 PF00072 Response regulator receiver domain APA07_RS07610 PF01029 NusB family APA07_RS07610 PF01189 16S rRNA methyltransferase RsmB/F APA07_RS07615 PF00478 IMP dehydrogenase / GMP reductase domain APA07_RS07615 PF00571 CBS domain APA07_RS07620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APA07_RS07625 PF12911 N-terminal TM domain of oligopeptide transport permease C APA07_RS07625 PF00528 Binding-protein-dependent transport system inner membrane component APA07_RS07630 PF00528 Binding-protein-dependent transport system inner membrane component APA07_RS07635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APA07_RS07635 PF00005 ABC transporter APA07_RS07640 PF00005 ABC transporter APA07_RS07640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APA07_RS07645 PF03060 Nitronate monooxygenase APA07_RS07650 PF01569 PAP2 superfamily APA07_RS07665 PF05506 Domain of unknown function (DUF756) APA07_RS07665 PF04185 Phosphoesterase family APA07_RS07690 PF07690 Major Facilitator Superfamily APA07_RS07705 PF03551 Transcriptional regulator PadR-like family APA07_RS07715 PF00529 HlyD membrane-fusion protein of T1SS APA07_RS07715 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APA07_RS07720 PF04632 Fusaric acid resistance protein family APA07_RS07730 PF13282 Domain of unknown function (DUF4070) APA07_RS07730 PF04055 Radical SAM superfamily APA07_RS07730 PF02310 B12 binding domain APA07_RS07740 PF00593 TonB dependent receptor APA07_RS07740 PF07715 TonB-dependent Receptor Plug Domain APA07_RS07745 PF00924 Mechanosensitive ion channel APA07_RS07745 PF05552 Conserved TM helix APA07_RS07750 PF07995 Glucose / Sorbosone dehydrogenase APA07_RS07755 PF07995 Glucose / Sorbosone dehydrogenase APA07_RS07765 PF02322 Cytochrome bd terminal oxidase subunit II APA07_RS07770 PF01654 Cytochrome bd terminal oxidase subunit I APA07_RS07775 PF00664 ABC transporter transmembrane region APA07_RS07775 PF00005 ABC transporter APA07_RS07780 PF00664 ABC transporter transmembrane region APA07_RS07780 PF00005 ABC transporter APA07_RS07790 PF18331 PKHD-type hydroxylase C-terminal domain APA07_RS07790 PF13640 2OG-Fe(II) oxygenase superfamily APA07_RS07795 PF00593 TonB dependent receptor APA07_RS07795 PF07715 TonB-dependent Receptor Plug Domain APA07_RS07805 PF01609 Transposase DDE domain APA07_RS07815 PF17763 Glutaminase/Asparaginase C-terminal domain APA07_RS07815 PF00710 Asparaginase, N-terminal APA07_RS07820 PF00155 Aminotransferase class I and II APA07_RS07825 PF06826 Predicted Permease Membrane Region APA07_RS07825 PF02080 TrkA-C domain APA07_RS07860 PF00005 ABC transporter APA07_RS07860 PF12848 ABC transporter APA07_RS07865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APA07_RS07865 PF03466 LysR substrate binding domain APA07_RS07880 PF07715 TonB-dependent Receptor Plug Domain APA07_RS07880 PF00593 TonB dependent receptor APA07_RS07885 PF08240 Alcohol dehydrogenase GroES-like domain APA07_RS07885 PF00107 Zinc-binding dehydrogenase APA07_RS07900 PF05974 Domain of unknown function (DUF892) APA07_RS07910 PF02308 MgtC family APA07_RS07925 PF02515 CoA-transferase family III APA07_RS07935 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APA07_RS07935 PF00205 Thiamine pyrophosphate enzyme, central domain APA07_RS07935 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APA07_RS07940 PF02515 CoA-transferase family III APA07_RS07975 PF07690 Major Facilitator Superfamily APA07_RS07980 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III APA07_RS07980 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain APA07_RS07980 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II APA07_RS07980 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I APA07_RS07985 PF14602 Hexapeptide repeat of succinyl-transferase APA07_RS07985 PF12464 Maltose acetyltransferase APA07_RS08000 PF13333 Integrase core domain APA07_RS08000 PF13276 HTH-like domain APA07_RS08000 PF00665 Integrase core domain APA07_RS08005 PF01527 Transposase APA07_RS08030 PF00512 His Kinase A (phospho-acceptor) domain APA07_RS08030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APA07_RS08030 PF08521 Two-component sensor kinase N-terminal APA07_RS08035 PF00072 Response regulator receiver domain APA07_RS08035 PF00486 Transcriptional regulatory protein, C terminal APA07_RS08040 PF00873 AcrB/AcrD/AcrF family APA07_RS08105 PF00501 AMP-binding enzyme APA07_RS08115 PF00155 Aminotransferase class I and II APA07_RS08130 PF00149 Calcineurin-like phosphoesterase APA07_RS08155 PF13419 Haloacid dehalogenase-like hydrolase APA07_RS08160 PF12804 MobA-like NTP transferase domain APA07_RS08160 PF00132 Bacterial transferase hexapeptide (six repeats) APA07_RS08160 PF14602 Hexapeptide repeat of succinyl-transferase APA07_RS08165 PF01380 SIS domain APA07_RS08175 PF01609 Transposase DDE domain APA07_RS08185 PF01609 Transposase DDE domain APA07_RS08210 PF00255 Glutathione peroxidase APA07_RS08215 PF00005 ABC transporter APA07_RS08220 PF02687 FtsX-like permease family APA07_RS08220 PF12704 MacB-like periplasmic core domain APA07_RS08225 PF03129 Anticodon binding domain APA07_RS08225 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) APA07_RS08230 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain APA07_RS08230 PF17770 Ribonuclease J C-terminal domain APA07_RS08230 PF12706 Beta-lactamase superfamily domain APA07_RS08235 PF03309 Type III pantothenate kinase APA07_RS08240 PF02237 Biotin protein ligase C terminal domain APA07_RS08240 PF03099 Biotin/lipoate A/B protein ligase family APA07_RS08245 PF00361 Proton-conducting membrane transporter APA07_RS08250 PF00361 Proton-conducting membrane transporter APA07_RS08250 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus APA07_RS08255 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L APA07_RS08260 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 APA07_RS08265 PF12838 4Fe-4S dicluster domain APA07_RS08270 PF00146 NADH dehydrogenase APA07_RS08275 PF00384 Molybdopterin oxidoreductase APA07_RS08275 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region APA07_RS08275 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal APA07_RS08280 PF10531 SLBB domain APA07_RS08280 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region APA07_RS08280 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit APA07_RS08290 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit APA07_RS08295 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit APA07_RS08300 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit APA07_RS08305 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 APA07_RS08325 PF00216 Bacterial DNA-binding protein APA07_RS08330 PF02190 ATP-dependent protease La (LON) substrate-binding domain APA07_RS08330 PF00004 ATPase family associated with various cellular activities (AAA) APA07_RS08330 PF05362 Lon protease (S16) C-terminal proteolytic domain APA07_RS08335 PF10431 C-terminal, D2-small domain, of ClpB protein APA07_RS08335 PF07724 AAA domain (Cdc48 subfamily) APA07_RS08335 PF06689 ClpX C4-type zinc finger APA07_RS08340 PF00574 Clp protease APA07_RS08345 PF05697 Bacterial trigger factor protein (TF) APA07_RS08345 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase APA07_RS08345 PF05698 Bacterial trigger factor protein (TF) C-terminus APA07_RS08355 PF01256 Carbohydrate kinase APA07_RS08355 PF03853 YjeF-related protein N-terminus APA07_RS08370 PF00270 DEAD/DEAH box helicase APA07_RS08370 PF00271 Helicase conserved C-terminal domain APA07_RS08375 PF05958 tRNA (Uracil-5-)-methyltransferase APA07_RS08380 PF01521 Iron-sulphur cluster biosynthesis APA07_RS08385 PF01883 Iron-sulfur cluster assembly protein APA07_RS08395 PF00266 Aminotransferase class-V APA07_RS08400 PF01458 Uncharacterized protein family (UPF0051) APA07_RS08405 PF00005 ABC transporter APA07_RS08410 PF01458 Uncharacterized protein family (UPF0051) APA07_RS08415 PF02082 Transcriptional regulator APA07_RS08420 PF04286 Protein of unknown function (DUF445) APA07_RS08425 PF00311 Phosphoenolpyruvate carboxylase APA07_RS08435 PF03764 Elongation factor G, domain IV APA07_RS08435 PF00009 Elongation factor Tu GTP binding domain APA07_RS08435 PF14492 Elongation Factor G, domain II APA07_RS08435 PF03144 Elongation factor Tu domain 2 APA07_RS08435 PF00679 Elongation factor G C-terminus APA07_RS08440 PF00830 Ribosomal L28 family APA07_RS08450 PF00664 ABC transporter transmembrane region APA07_RS08450 PF00005 ABC transporter APA07_RS08460 PF08335 GlnD PII-uridylyltransferase APA07_RS08460 PF01966 HD domain APA07_RS08465 PF00488 MutS domain V APA07_RS08465 PF05190 MutS family domain IV APA07_RS08465 PF05192 MutS domain III APA07_RS08465 PF05188 MutS domain II APA07_RS08465 PF01624 MutS domain I APA07_RS08475 PF02074 Carboxypeptidase Taq (M32) metallopeptidase APA07_RS08485 PF00291 Pyridoxal-phosphate dependent enzyme APA07_RS08485 PF14821 Threonine synthase N terminus APA07_RS08490 PF00675 Insulinase (Peptidase family M16) APA07_RS08490 PF05193 Peptidase M16 inactive domain APA07_RS08495 PF01523 Putative modulator of DNA gyrase APA07_RS08510 PF01040 UbiA prenyltransferase family APA07_RS08515 PF00115 Cytochrome C and Quinol oxidase polypeptide I APA07_RS08520 PF01209 ubiE/COQ5 methyltransferase family APA07_RS08525 PF02951 Prokaryotic glutathione synthetase, N-terminal domain APA07_RS08525 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain APA07_RS08540 PF01037 Lrp/AsnC ligand binding domain APA07_RS08545 PF07992 Pyridine nucleotide-disulphide oxidoreductase APA07_RS08550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APA07_RS08550 PF03466 LysR substrate binding domain APA07_RS08555 PF05443 ROS/MUCR transcriptional regulator protein APA07_RS08560 PF00216 Bacterial DNA-binding protein APA07_RS08570 PF03023 Lipid II flippase MurJ APA07_RS08585 PF13411 MerR HTH family regulatory protein APA07_RS08590 PF00216 Bacterial DNA-binding protein APA07_RS08595 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III APA07_RS08595 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal APA07_RS08600 PF02504 Fatty acid synthesis protein APA07_RS08605 PF01783 Ribosomal L32p protein family APA07_RS08620 PF00512 His Kinase A (phospho-acceptor) domain APA07_RS08620 PF00672 HAMP domain APA07_RS08620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APA07_RS08625 PF00072 Response regulator receiver domain APA07_RS08625 PF00486 Transcriptional regulatory protein, C terminal APA07_RS08630 PF12802 MarR family APA07_RS08640 PF01327 Polypeptide deformylase APA07_RS08645 PF01165 Ribosomal protein S21 APA07_RS08650 PF00180 Isocitrate/isopropylmalate dehydrogenase APA07_RS08655 PF00694 Aconitase C-terminal domain APA07_RS08660 PF00330 Aconitase family (aconitate hydratase) APA07_RS08665 PF01245 Ribosomal protein L19 APA07_RS08670 PF01746 tRNA (Guanine-1)-methyltransferase APA07_RS08675 PF01782 RimM N-terminal domain APA07_RS08680 PF00886 Ribosomal protein S16 APA07_RS08685 PF02978 Signal peptide binding domain APA07_RS08685 PF02881 SRP54-type protein, helical bundle domain APA07_RS08685 PF00448 SRP54-type protein, GTPase domain APA07_RS08705 PF01479 S4 domain APA07_RS08705 PF00849 RNA pseudouridylate synthase APA07_RS08710 PF00004 ATPase family associated with various cellular activities (AAA) APA07_RS08710 PF12002 MgsA AAA+ ATPase C terminal APA07_RS08710 PF16193 AAA C-terminal domain APA07_RS08720 PF01040 UbiA prenyltransferase family APA07_RS08725 PF04452 RNA methyltransferase APA07_RS08730 PF04107 Glutamate-cysteine ligase family 2(GCS2) APA07_RS08735 PF07690 Major Facilitator Superfamily APA07_RS08740 PF01926 50S ribosome-binding GTPase APA07_RS08740 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal APA07_RS08745 PF13360 PQQ-like domain APA07_RS08765 PF00534 Glycosyl transferases group 1 APA07_RS08765 PF13439 Glycosyltransferase Family 4 APA07_RS08770 PF00733 Asparagine synthase APA07_RS08770 PF13537 Glutamine amidotransferase domain APA07_RS08780 PF01502 Phosphoribosyl-AMP cyclohydrolase APA07_RS08785 PF02684 Lipid-A-disaccharide synthetase APA07_RS08790 PF01740 STAS domain APA07_RS08790 PF00916 Sulfate permease family APA07_RS08795 PF01794 Ferric reductase like transmembrane component APA07_RS08810 PF02777 Iron/manganese superoxide dismutases, C-terminal domain APA07_RS08810 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain APA07_RS08815 PF07724 AAA domain (Cdc48 subfamily) APA07_RS08815 PF00004 ATPase family associated with various cellular activities (AAA) APA07_RS08815 PF10431 C-terminal, D2-small domain, of ClpB protein APA07_RS08815 PF02861 Clp amino terminal domain, pathogenicity island component APA07_RS08815 PF17871 AAA lid domain APA07_RS08820 PF00293 NUDIX domain APA07_RS08825 PF16360 GTP-binding GTPase Middle Region APA07_RS08825 PF13167 GTP-binding GTPase N-terminal APA07_RS08825 PF01926 50S ribosome-binding GTPase APA07_RS08830 PF17209 Hfq protein APA07_RS08835 PF00072 Response regulator receiver domain APA07_RS08835 PF00158 Sigma-54 interaction domain APA07_RS08835 PF02954 Bacterial regulatory protein, Fis family APA07_RS08840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APA07_RS08840 PF00672 HAMP domain APA07_RS08845 PF02954 Bacterial regulatory protein, Fis family APA07_RS08845 PF00072 Response regulator receiver domain APA07_RS08845 PF00158 Sigma-54 interaction domain APA07_RS08850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APA07_RS08850 PF00989 PAS fold APA07_RS08850 PF00512 His Kinase A (phospho-acceptor) domain APA07_RS08855 PF01207 Dihydrouridine synthase (Dus) APA07_RS08860 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase APA07_RS08860 PF02542 YgbB family APA07_RS08865 PF00535 Glycosyl transferase family 2 APA07_RS08880 PF03275 UDP-galactopyranose mutase APA07_RS08905 PF00156 Phosphoribosyl transferase domain APA07_RS08930 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain APA07_RS08930 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain APA07_RS08930 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain APA07_RS08940 PF00543 Nitrogen regulatory protein P-II APA07_RS08945 PF00132 Bacterial transferase hexapeptide (six repeats) APA07_RS08945 PF06426 Serine acetyltransferase, N-terminal APA07_RS08950 PF01494 FAD binding domain APA07_RS08955 PF09335 SNARE associated Golgi protein APA07_RS08990 PF13358 DDE superfamily endonuclease APA07_RS08995 PF02371 Transposase IS116/IS110/IS902 family APA07_RS08995 PF01548 Transposase APA07_RS09005 PF01132 Elongation factor P (EF-P) OB domain APA07_RS09005 PF08207 Elongation factor P (EF-P) KOW-like domain APA07_RS09005 PF09285 Elongation factor P, C-terminal APA07_RS09010 PF00459 Inositol monophosphatase family APA07_RS09015 PF04851 Type III restriction enzyme, res subunit APA07_RS09015 PF13307 Helicase C-terminal domain APA07_RS09020 PF00313 'Cold-shock' DNA-binding domain APA07_RS09025 PF01738 Dienelactone hydrolase family APA07_RS09030 PF00166 Chaperonin 10 Kd subunit APA07_RS09035 PF00118 TCP-1/cpn60 chaperonin family APA07_RS09045 PF01527 Transposase APA07_RS09055 PF13007 Transposase C of IS166 homeodomain APA07_RS09055 PF13005 zinc-finger binding domain of transposase IS66 APA07_RS09055 PF13817 IS66 C-terminal element APA07_RS09055 PF03050 Transposase IS66 family APA07_RS09070 PF13333 Integrase core domain APA07_RS09070 PF00665 Integrase core domain APA07_RS09070 PF13276 HTH-like domain APA07_RS09075 PF01527 Transposase APA07_RS09140 PF00483 Nucleotidyl transferase APA07_RS09145 PF16363 GDP-mannose 4,6 dehydratase APA07_RS09150 PF13340 Putative transposase of IS4/5 family (DUF4096) APA07_RS09205 PF13005 zinc-finger binding domain of transposase IS66 APA07_RS09205 PF03050 Transposase IS66 family APA07_RS09205 PF13817 IS66 C-terminal element APA07_RS09205 PF13007 Transposase C of IS166 homeodomain APA07_RS09215 PF01527 Transposase APA07_RS09235 PF00909 Ammonium Transporter Family APA07_RS09250 PF00561 alpha/beta hydrolase fold APA07_RS09255 PF00589 Phage integrase family APA07_RS09255 PF02899 Phage integrase, N-terminal SAM-like domain APA07_RS09260 PF17764 3′ DNA-binding domain (3′BD) APA07_RS09260 PF00270 DEAD/DEAH box helicase APA07_RS09260 PF18319 PriA DNA helicase Cys-rich region (CRR) domain APA07_RS09260 PF18074 Primosomal protein N C-terminal domain APA07_RS09265 PF02699 Preprotein translocase subunit APA07_RS09275 PF00355 Rieske [2Fe-2S] domain APA07_RS09280 PF00293 NUDIX domain APA07_RS09285 PF01050 Mannose-6-phosphate isomerase APA07_RS09285 PF00483 Nucleotidyl transferase APA07_RS09295 PF01053 Cys/Met metabolism PLP-dependent enzyme APA07_RS09300 PF04379 ApaG domain APA07_RS09305 PF01227 GTP cyclohydrolase I APA07_RS09315 PF00994 Probable molybdopterin binding domain APA07_RS09345 PF13533 Biotin-lipoyl like APA07_RS09375 PF00885 6,7-dimethyl-8-ribityllumazine synthase APA07_RS09380 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase APA07_RS09380 PF00925 GTP cyclohydrolase II APA07_RS09385 PF00677 Lumazine binding domain APA07_RS09390 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region APA07_RS09390 PF01872 RibD C-terminal domain APA07_RS09395 PF00033 Cytochrome b/b6/petB APA07_RS09395 PF02167 Cytochrome C1 family APA07_RS09395 PF00032 Cytochrome b(C-terminal)/b6/petD APA07_RS09400 PF00033 Cytochrome b/b6/petB APA07_RS09400 PF02167 Cytochrome C1 family APA07_RS09400 PF00032 Cytochrome b(C-terminal)/b6/petD APA07_RS09405 PF00355 Rieske [2Fe-2S] domain APA07_RS09405 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal APA07_RS09410 PF03358 NADPH-dependent FMN reductase APA07_RS09425 PF00860 Permease family APA07_RS09440 PF07859 alpha/beta hydrolase fold APA07_RS09480 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) APA07_RS09480 PF04851 Type III restriction enzyme, res subunit APA07_RS09480 PF08463 EcoEI R protein C-terminal APA07_RS09480 PF00271 Helicase conserved C-terminal domain APA07_RS09500 PF13333 Integrase core domain APA07_RS09500 PF13276 HTH-like domain APA07_RS09500 PF00665 Integrase core domain APA07_RS09505 PF01527 Transposase APA07_RS09530 PF00829 Ribosomal prokaryotic L21 protein APA07_RS09535 PF01016 Ribosomal L27 protein APA07_RS09540 PF01018 GTP1/OBG APA07_RS09540 PF01926 50S ribosome-binding GTPase APA07_RS09545 PF01472 PUA domain APA07_RS09545 PF00696 Amino acid kinase family APA07_RS09555 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) APA07_RS09560 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain APA07_RS09560 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain APA07_RS09570 PF07859 alpha/beta hydrolase fold APA07_RS09580 PF02381 MraZ protein, putative antitoxin-like APA07_RS09585 PF01795 MraW methylase family APA07_RS09595 PF00905 Penicillin binding protein transpeptidase domain APA07_RS09595 PF03717 Penicillin-binding Protein dimerisation domain APA07_RS09600 PF02875 Mur ligase family, glutamate ligase domain APA07_RS09600 PF08245 Mur ligase middle domain APA07_RS09600 PF01225 Mur ligase family, catalytic domain APA07_RS09605 PF01225 Mur ligase family, catalytic domain APA07_RS09605 PF02875 Mur ligase family, glutamate ligase domain APA07_RS09605 PF08245 Mur ligase middle domain APA07_RS09610 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 APA07_RS09610 PF00953 Glycosyl transferase family 4 APA07_RS09615 PF02875 Mur ligase family, glutamate ligase domain APA07_RS09615 PF08245 Mur ligase middle domain APA07_RS09620 PF01098 Cell cycle protein APA07_RS09625 PF03033 Glycosyltransferase family 28 N-terminal domain APA07_RS09625 PF04101 Glycosyltransferase family 28 C-terminal domain APA07_RS09630 PF02875 Mur ligase family, glutamate ligase domain APA07_RS09630 PF01225 Mur ligase family, catalytic domain APA07_RS09630 PF08245 Mur ligase middle domain APA07_RS09635 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain APA07_RS09635 PF01565 FAD binding domain APA07_RS09640 PF01820 D-ala D-ala ligase N-terminus APA07_RS09640 PF07478 D-ala D-ala ligase C-terminus APA07_RS09645 PF08478 POTRA domain, FtsQ-type APA07_RS09645 PF03799 Cell division protein FtsQ APA07_RS09650 PF02491 SHS2 domain inserted in FTSA APA07_RS09655 PF00091 Tubulin/FtsZ family, GTPase domain APA07_RS09655 PF12327 FtsZ family, C-terminal domain APA07_RS09660 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase APA07_RS09665 PF13525 Outer membrane lipoprotein APA07_RS09670 PF02463 RecF/RecN/SMC N terminal domain APA07_RS09675 PF00533 BRCA1 C Terminus (BRCT) domain APA07_RS09675 PF03119 NAD-dependent DNA ligase C4 zinc finger domain APA07_RS09675 PF12826 Helix-hairpin-helix motif APA07_RS09675 PF01653 NAD-dependent DNA ligase adenylation domain APA07_RS09675 PF03120 NAD-dependent DNA ligase OB-fold domain APA07_RS09680 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain APA07_RS09680 PF02896 PEP-utilising enzyme, TIM barrel domain APA07_RS09680 PF00391 PEP-utilising enzyme, mobile domain APA07_RS09685 PF03618 Kinase/pyrophosphorylase APA07_RS09695 PF01205 Uncharacterized protein family UPF0029 APA07_RS09710 PF01474 Class-II DAHP synthetase family APA07_RS09725 PF00749 tRNA synthetases class I (E and Q), catalytic domain APA07_RS09730 PF00857 Isochorismatase family APA07_RS09740 PF00403 Heavy-metal-associated domain APA07_RS09750 PF00394 Multicopper oxidase APA07_RS09750 PF07732 Multicopper oxidase APA07_RS09750 PF07731 Multicopper oxidase APA07_RS09755 PF05275 Copper resistance protein B precursor (CopB) APA07_RS09760 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain APA07_RS09760 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain APA07_RS09765 PF10369 Small subunit of acetolactate synthase APA07_RS09770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APA07_RS09770 PF00205 Thiamine pyrophosphate enzyme, central domain APA07_RS09770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APA07_RS09795 PF00271 Helicase conserved C-terminal domain APA07_RS09795 PF00270 DEAD/DEAH box helicase APA07_RS09815 PF00464 Serine hydroxymethyltransferase APA07_RS09820 PF13520 Amino acid permease APA07_RS09825 PF00490 Delta-aminolevulinic acid dehydratase APA07_RS09830 PF04377 Arginine-tRNA-protein transferase, C terminus APA07_RS09830 PF04376 Arginine-tRNA-protein transferase, N terminus APA07_RS09835 PF00521 DNA gyrase/topoisomerase IV, subunit A APA07_RS09835 PF03989 DNA gyrase C-terminal domain, beta-propeller APA07_RS09840 PF11967 Recombination protein O N terminal APA07_RS09840 PF02565 Recombination protein O C terminal APA07_RS09845 PF00889 Elongation factor TS APA07_RS09850 PF00318 Ribosomal protein S2 APA07_RS09855 PF00355 Rieske [2Fe-2S] domain APA07_RS09870 PF01063 Amino-transferase class IV APA07_RS09875 PF04715 Anthranilate synthase component I, N terminal region APA07_RS09875 PF00425 chorismate binding enzyme APA07_RS09880 PF17657 Bacterial DNA polymerase III alpha subunit finger domain APA07_RS09880 PF14579 Helix-hairpin-helix motif APA07_RS09880 PF02811 PHP domain APA07_RS09880 PF07733 Bacterial DNA polymerase III alpha NTPase domain APA07_RS09885 PF02569 Pantoate-beta-alanine ligase APA07_RS09890 PF01042 Endoribonuclease L-PSP APA07_RS09905 PF00155 Aminotransferase class I and II APA07_RS09910 PF00155 Aminotransferase class I and II APA07_RS09915 PF00749 tRNA synthetases class I (E and Q), catalytic domain APA07_RS09940 PF04055 Radical SAM superfamily APA07_RS09940 PF02310 B12 binding domain APA07_RS09945 PF00334 Nucleoside diphosphate kinase APA07_RS09950 PF12848 ABC transporter APA07_RS09950 PF00005 ABC transporter APA07_RS09960 PF00486 Transcriptional regulatory protein, C terminal APA07_RS09960 PF00072 Response regulator receiver domain APA07_RS09965 PF00512 His Kinase A (phospho-acceptor) domain APA07_RS09965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APA07_RS09965 PF00672 HAMP domain APA07_RS09975 PF05198 Translation initiation factor IF-3, N-terminal domain APA07_RS09975 PF00707 Translation initiation factor IF-3, C-terminal domain APA07_RS09980 PF03129 Anticodon binding domain APA07_RS09980 PF02824 TGS domain APA07_RS09980 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) APA07_RS09980 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain APA07_RS10000 PF01513 ATP-NAD kinase APA07_RS10015 PF00075 RNase H APA07_RS10020 PF01636 Phosphotransferase enzyme family APA07_RS10025 PF02401 LytB protein APA07_RS10035 PF03109 ABC1 family APA07_RS10045 PF00310 Glutamine amidotransferases class-II APA07_RS10045 PF01493 GXGXG motif APA07_RS10045 PF01645 Conserved region in glutamate synthase APA07_RS10045 PF04898 Glutamate synthase central domain APA07_RS10050 PF07992 Pyridine nucleotide-disulphide oxidoreductase APA07_RS10050 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster APA07_RS10070 PF01520 N-acetylmuramoyl-L-alanine amidase APA07_RS10075 PF00575 S1 RNA binding domain APA07_RS10075 PF10150 Ribonuclease E/G family APA07_RS10075 PF12111 Polyribonucleotide phosphorylase C terminal APA07_RS10080 PF01634 ATP phosphoribosyltransferase APA07_RS10085 PF00815 Histidinol dehydrogenase APA07_RS10090 PF01176 Translation initiation factor 1A / IF-1 APA07_RS10095 PF02545 Maf-like protein APA07_RS10105 PF03884 DNA gyrase inhibitor YacG APA07_RS10235 PF00589 Phage integrase family APA07_RS10235 PF02899 Phage integrase, N-terminal SAM-like domain APA07_RS10305 PF07733 Bacterial DNA polymerase III alpha NTPase domain APA07_RS10305 PF17657 Bacterial DNA polymerase III alpha subunit finger domain APA07_RS10305 PF11490 DNA polymerase III polC-type N-terminus II APA07_RS10305 PF14579 Helix-hairpin-helix motif APA07_RS10305 PF01336 OB-fold nucleic acid binding domain APA07_RS10305 PF02811 PHP domain APA07_RS10305 PF00929 Exonuclease APA07_RS10360 PF00589 Phage integrase family APA07_RS10380 PF00171 Aldehyde dehydrogenase family APA07_RS10385 PF09330 D-lactate dehydrogenase, membrane binding APA07_RS10385 PF01565 FAD binding domain APA07_RS10390 PF15887 Putative zinc-binding metallo-peptidase APA07_RS10390 PF10005 zinc-ribbon domain APA07_RS10400 PF14403 Circularly permuted ATP-grasp type 2 APA07_RS10410 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain APA07_RS10410 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain APA07_RS10415 PF02445 Quinolinate synthetase A protein APA07_RS10425 PF00440 Bacterial regulatory proteins, tetR family APA07_RS10425 PF16925 Tetracyclin repressor-like, C-terminal domain APA07_RS10430 PF07992 Pyridine nucleotide-disulphide oxidoreductase APA07_RS10435 PF00171 Aldehyde dehydrogenase family APA07_RS10440 PF07690 Major Facilitator Superfamily APA07_RS10450 PF03358 NADPH-dependent FMN reductase APA07_RS10455 PF02678 Pirin APA07_RS10455 PF05726 Pirin C-terminal cupin domain APA07_RS10460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APA07_RS10460 PF03466 LysR substrate binding domain APA07_RS10465 PF02472 Biopolymer transport protein ExbD/TolR APA07_RS10470 PF02472 Biopolymer transport protein ExbD/TolR APA07_RS10475 PF01618 MotA/TolQ/ExbB proton channel family APA07_RS10495 PF00892 EamA-like transporter family APA07_RS10500 PF03746 LamB/YcsF family APA07_RS10505 PF02626 Carboxyltransferase domain, subdomain A and B APA07_RS10515 PF00106 short chain dehydrogenase APA07_RS10520 PF00364 Biotin-requiring enzyme APA07_RS10525 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain APA07_RS10525 PF02785 Biotin carboxylase C-terminal domain APA07_RS10525 PF00289 Biotin carboxylase, N-terminal domain APA07_RS10535 PF00155 Aminotransferase class I and II APA07_RS10540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APA07_RS10540 PF03466 LysR substrate binding domain APA07_RS10545 PF01425 Amidase APA07_RS10550 PF00106 short chain dehydrogenase APA07_RS10555 PF00128 Alpha amylase, catalytic domain APA07_RS10560 PF11941 Domain of unknown function (DUF3459) APA07_RS10560 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) APA07_RS10560 PF00128 Alpha amylase, catalytic domain APA07_RS10565 PF00128 Alpha amylase, catalytic domain APA07_RS10565 PF02806 Alpha amylase, C-terminal all-beta domain APA07_RS10565 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) APA07_RS10570 PF08323 Starch synthase catalytic domain APA07_RS10570 PF00534 Glycosyl transferases group 1 APA07_RS10575 PF00128 Alpha amylase, catalytic domain APA07_RS10575 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) APA07_RS10590 PF00205 Thiamine pyrophosphate enzyme, central domain APA07_RS10590 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APA07_RS10590 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APA07_RS10595 PF01527 Transposase APA07_RS10600 PF13333 Integrase core domain APA07_RS10600 PF00665 Integrase core domain APA07_RS10600 PF13276 HTH-like domain APA07_RS10605 PF01494 FAD binding domain APA07_RS10610 PF02630 SCO1/SenC APA07_RS10630 PF00665 Integrase core domain APA07_RS10630 PF13333 Integrase core domain APA07_RS10630 PF13276 HTH-like domain APA07_RS10635 PF01527 Transposase APA07_RS10675 PF03466 LysR substrate binding domain APA07_RS10675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APA07_RS10680 PF04632 Fusaric acid resistance protein family APA07_RS10710 PF00893 Small Multidrug Resistance protein APA07_RS10715 PF02403 Seryl-tRNA synthetase N-terminal domain APA07_RS10715 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) APA07_RS10720 PF00902 Sec-independent protein translocase protein (TatC) APA07_RS10725 PF02416 mttA/Hcf106 family APA07_RS10730 PF04079 Segregation and condensation complex subunit ScpB APA07_RS10735 PF02616 Segregation and condensation protein ScpA APA07_RS10745 PF05746 DALR anticodon binding domain APA07_RS10745 PF03485 Arginyl tRNA synthetase N terminal domain APA07_RS10745 PF00750 tRNA synthetases class I (R) APA07_RS10750 PF01966 HD domain APA07_RS10750 PF13286 Phosphohydrolase-associated domain APA07_RS10755 PF01521 Iron-sulphur cluster biosynthesis APA07_RS10760 PF03372 Endonuclease/Exonuclease/phosphatase family APA07_RS10780 PF12706 Beta-lactamase superfamily domain APA07_RS10785 PF03070 TENA/THI-4/PQQC family APA07_RS10790 PF05402 Coenzyme PQQ synthesis protein D (PqqD) APA07_RS10795 PF13186 Iron-sulfur cluster-binding domain APA07_RS10795 PF04055 Radical SAM superfamily APA07_RS10805 PF00574 Clp protease APA07_RS10815 PF00155 Aminotransferase class I and II APA07_RS10820 PF01842 ACT domain APA07_RS10820 PF00742 Homoserine dehydrogenase APA07_RS10820 PF03447 Homoserine dehydrogenase, NAD binding domain APA07_RS10825 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded APA07_RS10830 PF17768 RecJ OB domain APA07_RS10830 PF02272 DHHA1 domain APA07_RS10830 PF01368 DHH family APA07_RS10835 PF00140 Sigma-70 factor, region 1.2 APA07_RS10835 PF04545 Sigma-70, region 4 APA07_RS10835 PF04542 Sigma-70 region 2 APA07_RS10840 PF00849 RNA pseudouridylate synthase APA07_RS10845 PF01032 FecCD transport family APA07_RS10850 PF00005 ABC transporter APA07_RS10855 PF02696 Uncharacterized ACR, YdiU/UPF0061 family APA07_RS10865 PF01063 Amino-transferase class IV APA07_RS10870 PF00476 DNA polymerase family A APA07_RS10870 PF01367 5'-3' exonuclease, C-terminal SAM fold APA07_RS10870 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain APA07_RS10870 PF01612 3'-5' exonuclease APA07_RS10885 PF08946 Osmosensory transporter coiled coil APA07_RS10885 PF00083 Sugar (and other) transporter APA07_RS10890 PF01609 Transposase DDE domain APA07_RS10900 PF02322 Cytochrome bd terminal oxidase subunit II APA07_RS10905 PF01654 Cytochrome bd terminal oxidase subunit I APA07_RS10915 PF04454 Encapsulating protein for peroxidase APA07_RS10920 PF00324 Amino acid permease APA07_RS10930 PF13360 PQQ-like domain APA07_RS10930 PF01011 PQQ enzyme repeat APA07_RS10940 PF14552 Tautomerase enzyme APA07_RS10945 PF00202 Aminotransferase class-III APA07_RS10950 PF00155 Aminotransferase class I and II APA07_RS10950 PF00392 Bacterial regulatory proteins, gntR family APA07_RS10955 PF01546 Peptidase family M20/M25/M40 APA07_RS10955 PF07687 Peptidase dimerisation domain APA07_RS10960 PF01180 Dihydroorotate dehydrogenase APA07_RS10965 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster APA07_RS10965 PF07992 Pyridine nucleotide-disulphide oxidoreductase APA07_RS10970 PF13005 zinc-finger binding domain of transposase IS66 APA07_RS10970 PF13817 IS66 C-terminal element APA07_RS10970 PF03050 Transposase IS66 family APA07_RS10970 PF13007 Transposase C of IS166 homeodomain APA07_RS10980 PF01527 Transposase APA07_RS10995 PF01979 Amidohydrolase family APA07_RS11000 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin APA07_RS11015 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase APA07_RS11020 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family APA07_RS11030 PF02556 Preprotein translocase subunit SecB APA07_RS11040 PF04166 Pyridoxal phosphate biosynthetic protein PdxA APA07_RS11045 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ APA07_RS11055 PF03702 Anhydro-N-acetylmuramic acid kinase APA07_RS11070 PF00474 Sodium:solute symporter family APA07_RS11080 PF13532 2OG-Fe(II) oxygenase superfamily APA07_RS11085 PF00144 Beta-lactamase APA07_RS11090 PF01381 Helix-turn-helix APA07_RS11095 PF00970 Oxidoreductase FAD-binding domain APA07_RS11095 PF00175 Oxidoreductase NAD-binding domain APA07_RS11095 PF00042 Globin APA07_RS11100 PF00528 Binding-protein-dependent transport system inner membrane component APA07_RS11105 PF09383 NIL domain APA07_RS11105 PF00005 ABC transporter APA07_RS11110 PF03180 NLPA lipoprotein APA07_RS11115 PF01565 FAD binding domain APA07_RS11115 PF02913 FAD linked oxidases, C-terminal domain APA07_RS11120 PF14824 Sirohaem biosynthesis protein central APA07_RS11120 PF10414 Sirohaem synthase dimerisation region APA07_RS11120 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APA07_RS11130 PF07859 alpha/beta hydrolase fold APA07_RS11135 PF01047 MarR family APA07_RS11140 PF01425 Amidase APA07_RS11145 PF01613 Flavin reductase like domain APA07_RS11150 PF00596 Class II Aldolase and Adducin N-terminal domain APA07_RS11160 PF00111 2Fe-2S iron-sulfur cluster binding domain APA07_RS11160 PF00175 Oxidoreductase NAD-binding domain APA07_RS11165 PF00106 short chain dehydrogenase APA07_RS11175 PF00355 Rieske [2Fe-2S] domain APA07_RS11175 PF00848 Ring hydroxylating alpha subunit (catalytic domain) APA07_RS11185 PF08028 Acyl-CoA dehydrogenase, C-terminal domain APA07_RS11195 PF00171 Aldehyde dehydrogenase family APA07_RS11200 PF13442 Cytochrome C oxidase, cbb3-type, subunit III APA07_RS11200 PF13360 PQQ-like domain APA07_RS11205 PF07690 Major Facilitator Superfamily APA07_RS11220 PF00528 Binding-protein-dependent transport system inner membrane component APA07_RS11225 PF00528 Binding-protein-dependent transport system inner membrane component APA07_RS11235 PF13340 Putative transposase of IS4/5 family (DUF4096) APA07_RS11240 PF00528 Binding-protein-dependent transport system inner membrane component APA07_RS11245 PF13416 Bacterial extracellular solute-binding protein APA07_RS11250 PF08402 TOBE domain APA07_RS11250 PF00005 ABC transporter APA07_RS11255 PF00171 Aldehyde dehydrogenase family APA07_RS11275 PF13640 2OG-Fe(II) oxygenase superfamily APA07_RS11275 PF18331 PKHD-type hydroxylase C-terminal domain APA07_RS11290 PF07715 TonB-dependent Receptor Plug Domain APA07_RS11290 PF00593 TonB dependent receptor APA07_RS11295 PF01618 MotA/TolQ/ExbB proton channel family APA07_RS11300 PF02472 Biopolymer transport protein ExbD/TolR APA07_RS11315 PF00355 Rieske [2Fe-2S] domain APA07_RS11320 PF00375 Sodium:dicarboxylate symporter family APA07_RS11340 PF05199 GMC oxidoreductase APA07_RS11340 PF00732 GMC oxidoreductase APA07_RS11345 PF13442 Cytochrome C oxidase, cbb3-type, subunit III APA07_RS11345 PF00034 Cytochrome c APA07_RS11350 PF00171 Aldehyde dehydrogenase family APA07_RS11355 PF07690 Major Facilitator Superfamily APA07_RS11360 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase APA07_RS11365 PF02277 Phosphoribosyltransferase APA07_RS11370 PF02654 Cobalamin-5-phosphate synthase APA07_RS11375 PF00155 Aminotransferase class I and II APA07_RS11380 PF03186 CobD/Cbib protein APA07_RS11385 PF00881 Nitroreductase family APA07_RS11390 PF07685 CobB/CobQ-like glutamine amidotransferase domain APA07_RS11390 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain APA07_RS11395 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP APA07_RS11395 PF12557 Cob(I)alamin adenosyltransferase N terminal APA07_RS11405 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain APA07_RS11405 PF07685 CobB/CobQ-like glutamine amidotransferase domain APA07_RS11410 PF02514 CobN/Magnesium Chelatase APA07_RS11415 PF07683 Cobalamin synthesis protein cobW C-terminal domain APA07_RS11415 PF02492 CobW/HypB/UreG, nucleotide-binding domain APA07_RS11435 PF04632 Fusaric acid resistance protein family APA07_RS11440 PF01184 GPR1/FUN34/yaaH family APA07_RS11445 PF00378 Enoyl-CoA hydratase/isomerase APA07_RS11450 PF01613 Flavin reductase like domain APA07_RS11455 PF00950 ABC 3 transport family APA07_RS11460 PF00005 ABC transporter APA07_RS11470 PF01475 Ferric uptake regulator family APA07_RS11485 PF01008 Initiation factor 2 subunit family APA07_RS11500 PF00291 Pyridoxal-phosphate dependent enzyme APA07_RS11505 PF02540 NAD synthase APA07_RS11505 PF00117 Glutamine amidotransferase class-I APA07_RS11505 PF00958 GMP synthase C terminal domain APA07_RS11525 PF00239 Resolvase, N terminal domain APA07_RS11525 PF02796 Helix-turn-helix domain of resolvase APA07_RS11560 PF13340 Putative transposase of IS4/5 family (DUF4096) APA07_RS11580 PF01609 Transposase DDE domain APA07_RS11625 PF00083 Sugar (and other) transporter APA07_RS11630 PF01551 Peptidase family M23 APA07_RS11630 PF01464 Transglycosylase SLT domain APA07_RS11630 PF10145 Phage-related minor tail protein APA07_RS11635 PF02652 L-lactate permease APA07_RS11645 PF01370 NAD dependent epimerase/dehydratase family APA07_RS11650 PF01790 Prolipoprotein diacylglyceryl transferase APA07_RS11660 PF02578 Multi-copper polyphenol oxidoreductase laccase APA07_RS11685 PF00005 ABC transporter APA07_RS11690 PF02694 Uncharacterised BCR, YnfA/UPF0060 family APA07_RS11705 PF00155 Aminotransferase class I and II APA07_RS11715 PF02780 Transketolase, C-terminal domain APA07_RS11715 PF02779 Transketolase, pyrimidine binding domain APA07_RS11715 PF00456 Transketolase, thiamine diphosphate binding domain APA07_RS11720 PF00923 Transaldolase/Fructose-6-phosphate aldolase APA07_RS11725 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase APA07_RS11725 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain APA07_RS11735 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase APA07_RS11740 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) APA07_RS11765 PF00654 Voltage gated chloride channel APA07_RS11770 PF00107 Zinc-binding dehydrogenase APA07_RS11770 PF08240 Alcohol dehydrogenase GroES-like domain APA07_RS11775 PF01168 Alanine racemase, N-terminal domain APA07_RS11780 PF02705 K+ potassium transporter APA07_RS11785 PF04055 Radical SAM superfamily APA07_RS11785 PF06969 HemN C-terminal domain APA07_RS11805 PF00005 ABC transporter APA07_RS11810 PF12399 Branched-chain amino acid ATP-binding cassette transporter APA07_RS11810 PF00005 ABC transporter APA07_RS11820 PF02653 Branched-chain amino acid transport system / permease component APA07_RS11830 PF00072 Response regulator receiver domain APA07_RS11830 PF01627 Hpt domain APA07_RS11830 PF00512 His Kinase A (phospho-acceptor) domain APA07_RS11830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APA07_RS11830 PF00497 Bacterial extracellular solute-binding proteins, family 3 APA07_RS11835 PF00486 Transcriptional regulatory protein, C terminal APA07_RS11835 PF00072 Response regulator receiver domain APA07_RS11875 PF02492 CobW/HypB/UreG, nucleotide-binding domain APA07_RS11880 PF01730 UreF APA07_RS11885 PF05194 UreE urease accessory protein, C-terminal domain APA07_RS11885 PF02814 UreE urease accessory protein, N-terminal domain APA07_RS11890 PF01979 Amidohydrolase family APA07_RS11890 PF00449 Urease alpha-subunit, N-terminal domain APA07_RS11895 PF00699 Urease beta subunit APA07_RS11900 PF00547 Urease, gamma subunit APA07_RS11905 PF01774 UreD urease accessory protein APA07_RS11910 PF03824 High-affinity nickel-transport protein APA07_RS11915 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APA07_RS11915 PF00205 Thiamine pyrophosphate enzyme, central domain APA07_RS11915 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APA07_RS11935 PF00210 Ferritin-like domain APA07_RS11940 PF03960 ArsC family APA07_RS11950 PF03352 Methyladenine glycosylase APA07_RS11960 PF10417 C-terminal domain of 1-Cys peroxiredoxin APA07_RS11960 PF00578 AhpC/TSA family APA07_RS11965 PF00753 Metallo-beta-lactamase superfamily APA07_RS11970 PF01925 Sulfite exporter TauE/SafE APA07_RS11980 PF03960 ArsC family APA07_RS11995 PF02321 Outer membrane efflux protein APA07_RS12000 PF13533 Biotin-lipoyl like APA07_RS12010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APA07_RS12010 PF03466 LysR substrate binding domain APA07_RS12025 PF07690 Major Facilitator Superfamily APA07_RS12030 PF01609 Transposase DDE domain APA07_RS12035 PF17645 Arylmalonate decarboxylase APA07_RS12040 PF00561 alpha/beta hydrolase fold APA07_RS12045 PF00857 Isochorismatase family APA07_RS12055 PF00034 Cytochrome c APA07_RS12055 PF13442 Cytochrome C oxidase, cbb3-type, subunit III APA07_RS12055 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase APA07_RS12060 PF00111 2Fe-2S iron-sulfur cluster binding domain APA07_RS12060 PF01799 [2Fe-2S] binding domain APA07_RS12065 PF01494 FAD binding domain APA07_RS12070 PF12802 MarR family APA07_RS12090 PF00004 ATPase family associated with various cellular activities (AAA) APA07_RS12090 PF17862 AAA+ lid domain APA07_RS12090 PF01434 Peptidase family M41 APA07_RS12100 PF03743 Bacterial conjugation TrbI-like protein APA07_RS12110 PF13276 HTH-like domain APA07_RS12110 PF13333 Integrase core domain APA07_RS12110 PF00665 Integrase core domain APA07_RS12115 PF01527 Transposase APA07_RS12170 PF13276 HTH-like domain APA07_RS12170 PF13333 Integrase core domain APA07_RS12170 PF00665 Integrase core domain APA07_RS12175 PF01527 Transposase APA07_RS12200 PF00665 Integrase core domain APA07_RS12200 PF13276 HTH-like domain APA07_RS12200 PF13333 Integrase core domain APA07_RS12205 PF01527 Transposase APA07_RS12250 PF01370 NAD dependent epimerase/dehydratase family APA07_RS12260 PF00753 Metallo-beta-lactamase superfamily APA07_RS12270 PF13478 XdhC Rossmann domain APA07_RS12270 PF02625 XdhC and CoxI family APA07_RS12290 PF02347 Glycine cleavage system P-protein APA07_RS12295 PF01597 Glycine cleavage H-protein APA07_RS12300 PF08669 Glycine cleavage T-protein C-terminal barrel domain APA07_RS12300 PF01571 Aminomethyltransferase folate-binding domain APA07_RS12305 PF17284 Spermidine synthase tetramerisation domain APA07_RS12310 PF02675 S-adenosylmethionine decarboxylase APA07_RS12320 PF03466 LysR substrate binding domain APA07_RS12320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APA07_RS12330 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD APA07_RS12335 PF01467 Cytidylyltransferase-like APA07_RS12340 PF03989 DNA gyrase C-terminal domain, beta-propeller APA07_RS12340 PF00521 DNA gyrase/topoisomerase IV, subunit A APA07_RS12355 PF00013 KH domain APA07_RS12355 PF00575 S1 RNA binding domain APA07_RS12355 PF03725 3' exoribonuclease family, domain 2 APA07_RS12355 PF01138 3' exoribonuclease family, domain 1 APA07_RS12355 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain APA07_RS12360 PF00312 Ribosomal protein S15 APA07_RS12365 PF01509 TruB family pseudouridylate synthase (N terminal domain) APA07_RS12365 PF16198 tRNA pseudouridylate synthase B C-terminal domain APA07_RS12370 PF02405 Permease MlaE APA07_RS12375 PF00005 ABC transporter APA07_RS12380 PF02470 MlaD protein APA07_RS12425 PF00005 ABC transporter APA07_RS12425 PF00664 ABC transporter transmembrane region APA07_RS12425 PF03412 Peptidase C39 family APA07_RS12435 PF02965 Vitamin B12 dependent methionine synthase, activation domain APA07_RS12435 PF00809 Pterin binding enzyme APA07_RS12435 PF02310 B12 binding domain APA07_RS12435 PF02574 Homocysteine S-methyltransferase APA07_RS12435 PF02607 B12 binding domain APA07_RS12450 PF00156 Phosphoribosyl transferase domain APA07_RS12450 PF13537 Glutamine amidotransferase domain APA07_RS12460 PF02470 MlaD protein APA07_RS12465 PF04403 Paraquat-inducible protein A APA07_RS12475 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase APA07_RS12480 PF00535 Glycosyl transferase family 2 APA07_RS12485 PF00430 ATP synthase B/B' CF(0) APA07_RS12490 PF00430 ATP synthase B/B' CF(0) APA07_RS12495 PF00137 ATP synthase subunit C APA07_RS12500 PF00119 ATP synthase A chain APA07_RS12505 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter APA07_RS12510 PF02881 SRP54-type protein, helical bundle domain APA07_RS12510 PF00448 SRP54-type protein, GTPase domain APA07_RS12515 PF00919 Uncharacterized protein family UPF0004 APA07_RS12515 PF04055 Radical SAM superfamily APA07_RS12520 PF01678 Diaminopimelate epimerase APA07_RS12525 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily APA07_RS12535 PF00270 DEAD/DEAH box helicase APA07_RS12535 PF00271 Helicase conserved C-terminal domain APA07_RS12535 PF03880 DbpA RNA binding domain APA07_RS12550 PF00380 Ribosomal protein S9/S16 APA07_RS12555 PF00572 Ribosomal protein L13 APA07_RS12570 PF01895 PhoU domain APA07_RS12575 PF00005 ABC transporter APA07_RS12580 PF00528 Binding-protein-dependent transport system inner membrane component APA07_RS12585 PF00528 Binding-protein-dependent transport system inner membrane component APA07_RS12590 PF00920 Dehydratase family APA07_RS12600 PF08240 Alcohol dehydrogenase GroES-like domain APA07_RS12600 PF00107 Zinc-binding dehydrogenase APA07_RS12610 PF13180 PDZ domain APA07_RS12625 PF10609 NUBPL iron-transfer P-loop NTPase APA07_RS12640 PF02511 Thymidylate synthase complementing protein APA07_RS12650 PF05683 Fumarase C-terminus APA07_RS12650 PF05681 Fumarate hydratase (Fumerase) APA07_RS12655 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily APA07_RS12665 PF01266 FAD dependent oxidoreductase APA07_RS12670 PF00842 Alanine racemase, C-terminal domain APA07_RS12670 PF01168 Alanine racemase, N-terminal domain APA07_RS12675 PF01037 Lrp/AsnC ligand binding domain APA07_RS12680 PF02033 Ribosome-binding factor A APA07_RS12685 PF04760 Translation initiation factor IF-2, N-terminal region APA07_RS12685 PF08364 Bacterial translation initiation factor IF-2 associated region APA07_RS12685 PF11987 Translation-initiation factor 2 APA07_RS12685 PF00009 Elongation factor Tu GTP binding domain APA07_RS12695 PF00575 S1 RNA binding domain APA07_RS12695 PF08529 NusA N-terminal domain APA07_RS12695 PF13184 NusA-like KH domain APA07_RS12700 PF02576 RimP N-terminal domain APA07_RS12700 PF17384 RimP C-terminal SH3 domain APA07_RS12710 PF10431 C-terminal, D2-small domain, of ClpB protein APA07_RS12710 PF02861 Clp amino terminal domain, pathogenicity island component APA07_RS12710 PF00004 ATPase family associated with various cellular activities (AAA) APA07_RS12710 PF07724 AAA domain (Cdc48 subfamily) APA07_RS12710 PF17871 AAA lid domain APA07_RS12720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APA07_RS12720 PF03466 LysR substrate binding domain APA07_RS12725 PF00528 Binding-protein-dependent transport system inner membrane component APA07_RS12730 PF00005 ABC transporter APA07_RS12735 PF00694 Aconitase C-terminal domain APA07_RS12735 PF00330 Aconitase family (aconitate hydratase) APA07_RS12740 PF00005 ABC transporter APA07_RS12745 PF03379 CcmB protein APA07_RS12755 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain APA07_RS12755 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain APA07_RS12760 PF03631 Virulence factor BrkB APA07_RS12765 PF05036 Sporulation related domain APA07_RS12765 PF03330 Lytic transglycolase APA07_RS12770 PF01220 Dehydroquinase class II APA07_RS12775 PF00364 Biotin-requiring enzyme APA07_RS12780 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain APA07_RS12780 PF02785 Biotin carboxylase C-terminal domain APA07_RS12780 PF00289 Biotin carboxylase, N-terminal domain APA07_RS12785 PF00083 Sugar (and other) transporter APA07_RS12790 PF01964 Radical SAM ThiC family APA07_RS12790 PF13667 ThiC-associated domain APA07_RS12805 PF03239 Iron permease FTR1 family APA07_RS12810 PF10634 Fe2+ transport protein APA07_RS12815 PF04966 Carbohydrate-selective porin, OprB family APA07_RS12830 PF04966 Carbohydrate-selective porin, OprB family APA07_RS12840 PF00202 Aminotransferase class-III APA07_RS12850 PF03652 Holliday junction resolvase APA07_RS12855 PF02686 Glu-tRNAGln amidotransferase C subunit APA07_RS12860 PF01425 Amidase APA07_RS12865 PF02637 GatB domain APA07_RS12865 PF02934 GatB/GatE catalytic domain APA07_RS12875 PF00664 ABC transporter transmembrane region APA07_RS12875 PF00005 ABC transporter APA07_RS12880 PF10576 Iron-sulfur binding domain of endonuclease III APA07_RS12880 PF00730 HhH-GPD superfamily base excision DNA repair protein APA07_RS12880 PF00633 Helix-hairpin-helix motif APA07_RS12885 PF00762 Ferrochelatase APA07_RS12890 PF14815 NUDIX domain APA07_RS12890 PF00730 HhH-GPD superfamily base excision DNA repair protein APA07_RS12910 PF12100 Domain of unknown function (DUF3576) APA07_RS12915 PF13603 Leucyl-tRNA synthetase, Domain 2 APA07_RS12915 PF08264 Anticodon-binding domain of tRNA APA07_RS12915 PF00133 tRNA synthetases class I (I, L, M and V) APA07_RS12960 PF02321 Outer membrane efflux protein APA07_RS12970 PF01012 Electron transfer flavoprotein domain APA07_RS12970 PF00766 Electron transfer flavoprotein FAD-binding domain APA07_RS12975 PF01012 Electron transfer flavoprotein domain APA07_RS12990 PF04055 Radical SAM superfamily APA07_RS13000 PF00027 Cyclic nucleotide-binding domain APA07_RS13000 PF13545 Crp-like helix-turn-helix domain APA07_RS13005 PF13180 PDZ domain APA07_RS13010 PF14437 MafB19-like deaminase APA07_RS13015 PF07722 Peptidase C26 APA07_RS13020 PF00849 RNA pseudouridylate synthase APA07_RS13020 PF01479 S4 domain APA07_RS13030 PF00436 Single-strand binding protein family APA07_RS13040 PF01258 Prokaryotic dksA/traR C4-type zinc finger APA07_RS13060 PF00239 Resolvase, N terminal domain APA07_RS13060 PF02796 Helix-turn-helix domain of resolvase APA07_RS13085 PF13340 Putative transposase of IS4/5 family (DUF4096) APA07_RS13090 PF13439 Glycosyltransferase Family 4 APA07_RS13090 PF00534 Glycosyl transferases group 1 APA07_RS13100 PF00579 tRNA synthetases class I (W and Y) APA07_RS13105 PF01523 Putative modulator of DNA gyrase APA07_RS13110 PF00300 Histidine phosphatase superfamily (branch 1) APA07_RS13120 PF16363 GDP-mannose 4,6 dehydratase APA07_RS13125 PF00483 Nucleotidyl transferase APA07_RS13130 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase APA07_RS13135 PF04321 RmlD substrate binding domain APA07_RS13145 PF09397 Ftsk gamma domain APA07_RS13145 PF13491 4TM region of DNA translocase FtsK/SpoIIIE APA07_RS13145 PF01580 FtsK/SpoIIIE family APA07_RS13145 PF17854 FtsK alpha domain APA07_RS13150 PF01479 S4 domain APA07_RS13150 PF00849 RNA pseudouridylate synthase APA07_RS13155 PF00534 Glycosyl transferases group 1 APA07_RS13155 PF13439 Glycosyltransferase Family 4 APA07_RS13170 PF00111 2Fe-2S iron-sulfur cluster binding domain APA07_RS13175 PF00266 Aminotransferase class-V APA07_RS13180 PF00266 Aminotransferase class-V APA07_RS13185 PF02129 X-Pro dipeptidyl-peptidase (S15 family) APA07_RS13195 PF01406 tRNA synthetases class I (C) catalytic domain APA07_RS13195 PF09190 DALR domain APA07_RS13205 PF08245 Mur ligase middle domain APA07_RS13205 PF02875 Mur ligase family, glutamate ligase domain APA07_RS13210 PF17848 Acetyl-coA carboxylase zinc finger domain APA07_RS13210 PF01039 Carboxyl transferase domain APA07_RS13215 PF00085 Thioredoxin APA07_RS13220 PF12705 PD-(D/E)XK nuclease superfamily APA07_RS13220 PF00580 UvrD/REP helicase N-terminal domain APA07_RS13220 PF13361 UvrD-like helicase C-terminal domain APA07_RS13225 PF12705 PD-(D/E)XK nuclease superfamily APA07_RS13230 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE APA07_RS13235 PF00486 Transcriptional regulatory protein, C terminal APA07_RS13235 PF00072 Response regulator receiver domain APA07_RS13240 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I APA07_RS13240 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II APA07_RS13240 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III APA07_RS13240 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain APA07_RS13245 PF00809 Pterin binding enzyme APA07_RS13250 PF01434 Peptidase family M41 APA07_RS13250 PF17862 AAA+ lid domain APA07_RS13250 PF06480 FtsH Extracellular APA07_RS13250 PF00004 ATPase family associated with various cellular activities (AAA) APA07_RS13255 PF01171 PP-loop family APA07_RS13265 PF00691 OmpA family APA07_RS13270 PF07676 WD40-like Beta Propeller Repeat APA07_RS13270 PF04052 TolB amino-terminal domain APA07_RS13280 PF02472 Biopolymer transport protein ExbD/TolR APA07_RS13285 PF01618 MotA/TolQ/ExbB proton channel family APA07_RS13290 PF03061 Thioesterase superfamily APA07_RS13295 PF05491 RuvB C-terminal winged helix domain APA07_RS13295 PF05496 Holliday junction DNA helicase RuvB P-loop domain APA07_RS13295 PF17864 RuvB AAA lid domain APA07_RS13300 PF01330 RuvA N terminal domain APA07_RS13300 PF07499 RuvA, C-terminal domain APA07_RS13305 PF02075 Crossover junction endodeoxyribonuclease RuvC APA07_RS13310 PF01709 Transcriptional regulator APA07_RS13315 PF07516 SecA Wing and Scaffold domain APA07_RS13315 PF02810 SEC-C motif APA07_RS13315 PF01043 SecA preprotein cross-linking domain APA07_RS13315 PF07517 SecA DEAD-like domain APA07_RS13325 PF01960 ArgJ family APA07_RS13335 PF00924 Mechanosensitive ion channel APA07_RS13350 PF01556 DnaJ C terminal domain APA07_RS13350 PF00684 DnaJ central domain APA07_RS13350 PF00226 DnaJ domain APA07_RS13365 PF14748 Pyrroline-5-carboxylate reductase dimerisation APA07_RS13365 PF03807 NADP oxidoreductase coenzyme F420-dependent APA07_RS13385 PF00216 Bacterial DNA-binding protein APA07_RS13405 PF00535 Glycosyl transferase family 2 APA07_RS13415 PF00795 Carbon-nitrogen hydrolase APA07_RS13415 PF02540 NAD synthase APA07_RS13420 PF00475 Imidazoleglycerol-phosphate dehydratase APA07_RS13425 PF00117 Glutamine amidotransferase class-I APA07_RS13430 PF00977 Histidine biosynthesis protein APA07_RS13435 PF00977 Histidine biosynthesis protein APA07_RS13440 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase APA07_RS13445 PF01230 HIT domain APA07_RS13450 PF00881 Nitroreductase family APA07_RS13455 PF01494 FAD binding domain APA07_RS13460 PF13811 Domain of unknown function (DUF4186) APA07_RS13480 PF02195 ParB-like nuclease domain APA07_RS13480 PF17762 HTH domain found in ParB protein APA07_RS13485 PF13614 AAA domain APA07_RS13490 PF02527 rRNA small subunit methyltransferase G APA07_RS13495 PF01134 Glucose inhibited division protein A APA07_RS13495 PF13932 GidA associated domain APA07_RS13500 PF12631 MnmE helical domain APA07_RS13500 PF10396 GTP-binding protein TrmE N-terminus APA07_RS13500 PF01926 50S ribosome-binding GTPase APA07_RS13505 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain APA07_RS13505 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain APA07_RS13520 PF01609 Transposase DDE domain APA07_RS13535 PF03641 Possible lysine decarboxylase APA07_RS13540 PF07690 Major Facilitator Superfamily APA07_RS13550 PF03653 Uncharacterised protein family (UPF0093) APA07_RS13555 PF13419 Haloacid dehalogenase-like hydrolase APA07_RS13560 PF01208 Uroporphyrinogen decarboxylase (URO-D) APA07_RS13565 PF02545 Maf-like protein APA07_RS13600 PF02796 Helix-turn-helix domain of resolvase APA07_RS13600 PF00239 Resolvase, N terminal domain APA07_RS13640 PF01527 Transposase APA07_RS13645 PF13361 UvrD-like helicase C-terminal domain APA07_RS13645 PF00580 UvrD/REP helicase N-terminal domain APA07_RS13650 PF02371 Transposase IS116/IS110/IS902 family APA07_RS13650 PF01548 Transposase APA07_RS13655 PF02371 Transposase IS116/IS110/IS902 family APA07_RS13655 PF01548 Transposase APA07_RS13660 PF00239 Resolvase, N terminal domain APA07_RS13670 PF08125 Mannitol dehydrogenase C-terminal domain APA07_RS13670 PF01232 Mannitol dehydrogenase Rossmann domain APA07_RS13675 PF13419 Haloacid dehalogenase-like hydrolase APA07_RS13730 PF01527 Transposase APA07_RS13735 PF00665 Integrase core domain APA07_RS13735 PF13276 HTH-like domain APA07_RS13735 PF13333 Integrase core domain APA07_RS13760 PF13098 Thioredoxin-like domain APA07_RS13780 PF13614 AAA domain APA07_RS13785 PF02195 ParB-like nuclease domain APA07_RS13785 PF17762 HTH domain found in ParB protein APA07_RS13800 PF00216 Bacterial DNA-binding protein APA07_RS13840 PF00440 Bacterial regulatory proteins, tetR family APA07_RS13840 PF16925 Tetracyclin repressor-like, C-terminal domain APA07_RS13845 PF00465 Iron-containing alcohol dehydrogenase APA07_RS13850 PF00171 Aldehyde dehydrogenase family APA07_RS13880 PF03814 Potassium-transporting ATPase A subunit APA07_RS13890 PF02669 K+-transporting ATPase, c chain APA07_RS13895 PF13493 Domain of unknown function (DUF4118) APA07_RS13895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APA07_RS13895 PF13492 GAF domain APA07_RS13895 PF00512 His Kinase A (phospho-acceptor) domain APA07_RS13895 PF02702 Osmosensitive K+ channel His kinase sensor domain APA07_RS13900 PF00486 Transcriptional regulatory protein, C terminal APA07_RS13900 PF00072 Response regulator receiver domain APA07_RS13905 PF00999 Sodium/hydrogen exchanger family APA07_RS13920 PF02311 AraC-like ligand binding domain APA07_RS13920 PF12833 Helix-turn-helix domain APA07_RS13930 PF01757 Acyltransferase family APA07_RS13940 PF02661 Fic/DOC family APA07_RS13950 PF03428 Replication protein C N-terminal domain APA07_RS13950 PF11800 Replication protein C C-terminal region APA07_RS13965 PF03009 Glycerophosphoryl diester phosphodiesterase family APA07_RS13980 PF02537 CrcB-like protein, Camphor Resistance (CrcB) APA07_RS14030 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system APA07_RS14045 PF01609 Transposase DDE domain APA07_RS14050 PF01566 Natural resistance-associated macrophage protein APA07_RS14055 PF01325 Iron dependent repressor, N-terminal DNA binding domain APA07_RS14055 PF02742 Iron dependent repressor, metal binding and dimerisation domain APA07_RS14060 PF06472 ABC transporter transmembrane region 2 APA07_RS14060 PF00005 ABC transporter APA07_RS14065 PF04966 Carbohydrate-selective porin, OprB family APA07_RS14100 PF13340 Putative transposase of IS4/5 family (DUF4096) APA07_RS14115 PF13276 HTH-like domain APA07_RS14115 PF00665 Integrase core domain APA07_RS14115 PF13333 Integrase core domain APA07_RS14120 PF01527 Transposase APA07_RS14125 PF07859 alpha/beta hydrolase fold APA07_RS14145 PF00270 DEAD/DEAH box helicase APA07_RS14145 PF18019 HD domain APA07_RS14145 PF00271 Helicase conserved C-terminal domain APA07_RS14160 PF09344 CT1975-like protein APA07_RS14175 PF01867 CRISPR associated protein Cas1 APA07_RS14180 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) APA07_RS14205 PF13276 HTH-like domain APA07_RS14205 PF00665 Integrase core domain APA07_RS14205 PF13333 Integrase core domain APA07_RS14210 PF01527 Transposase APA07_RS14245 PF13333 Integrase core domain APA07_RS14245 PF00665 Integrase core domain APA07_RS14245 PF13276 HTH-like domain APA07_RS14250 PF01527 Transposase APA07_RS14260 PF04221 RelB antitoxin APA07_RS14265 PF05016 ParE toxin of type II toxin-antitoxin system, parDE APA07_RS14275 PF06100 MCRA family APA07_RS14345 PF00216 Bacterial DNA-binding protein APA07_RS14350 PF13276 HTH-like domain APA07_RS14350 PF00665 Integrase core domain APA07_RS14350 PF13333 Integrase core domain APA07_RS14355 PF01527 Transposase APA07_RS14385 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system APA07_RS14390 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin APA07_RS14415 PF01925 Sulfite exporter TauE/SafE APA07_RS14435 PF00501 AMP-binding enzyme APA07_RS14435 PF16177 Acetyl-coenzyme A synthetase N-terminus APA07_RS14435 PF13193 AMP-binding enzyme C-terminal domain APA07_RS14450 PF00534 Glycosyl transferases group 1 APA07_RS14450 PF13439 Glycosyltransferase Family 4 APA07_RS14455 PF02769 AIR synthase related protein, C-terminal domain APA07_RS14455 PF00586 AIR synthase related protein, N-terminal domain APA07_RS14470 PF00795 Carbon-nitrogen hydrolase APA07_RS14480 PF00392 Bacterial regulatory proteins, gntR family APA07_RS14480 PF00155 Aminotransferase class I and II APA07_RS14490 PF03466 LysR substrate binding domain APA07_RS14490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APA07_RS14495 PF07690 Major Facilitator Superfamily APA07_RS14510 PF13361 UvrD-like helicase C-terminal domain APA07_RS14510 PF00580 UvrD/REP helicase N-terminal domain APA07_RS14515 PF13538 UvrD-like helicase C-terminal domain APA07_RS14515 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain APA07_RS14515 PF14490 Helix-hairpin-helix containing domain APA07_RS14535 PF01527 Transposase APA07_RS14560 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) APA07_RS14560 PF18766 SWI2/SNF2 ATPase APA07_RS14560 PF11867 Domain of unknown function (DUF3387) APA07_RS14570 PF01609 Transposase DDE domain APA07_RS14575 PF01420 Type I restriction modification DNA specificity domain APA07_RS14580 PF01909 Nucleotidyltransferase domain APA07_RS14590 PF02384 N-6 DNA Methylase APA07_RS14595 PF00724 NADH:flavin oxidoreductase / NADH oxidase family APA07_RS14625 PF07687 Peptidase dimerisation domain APA07_RS14625 PF01546 Peptidase family M20/M25/M40 APA07_RS14630 PF00732 GMC oxidoreductase APA07_RS14630 PF05199 GMC oxidoreductase APA07_RS14635 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin APA07_RS14645 PF00171 Aldehyde dehydrogenase family APA07_RS14660 PF01527 Transposase APA07_RS14665 PF13333 Integrase core domain APA07_RS14665 PF00665 Integrase core domain APA07_RS14665 PF13276 HTH-like domain APA07_RS14670 PF00005 ABC transporter APA07_RS14680 PF01568 Molydopterin dinucleotide binding domain APA07_RS14680 PF00384 Molybdopterin oxidoreductase APA07_RS14680 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APA07_RS14685 PF01609 Transposase DDE domain APA07_RS14690 PF01568 Molydopterin dinucleotide binding domain APA07_RS14690 PF04324 BFD-like [2Fe-2S] binding domain APA07_RS14690 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APA07_RS14690 PF00384 Molybdopterin oxidoreductase APA07_RS14695 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain APA07_RS14695 PF01077 Nitrite and sulphite reductase 4Fe-4S domain APA07_RS14695 PF07992 Pyridine nucleotide-disulphide oxidoreductase APA07_RS14695 PF13806 Rieske-like [2Fe-2S] domain APA07_RS14695 PF04324 BFD-like [2Fe-2S] binding domain APA07_RS14695 PF18267 Rubredoxin NAD+ reductase C-terminal domain APA07_RS14700 PF04324 BFD-like [2Fe-2S] binding domain APA07_RS14700 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain APA07_RS14700 PF07992 Pyridine nucleotide-disulphide oxidoreductase APA07_RS14700 PF13806 Rieske-like [2Fe-2S] domain APA07_RS14700 PF18267 Rubredoxin NAD+ reductase C-terminal domain APA07_RS14700 PF01077 Nitrite and sulphite reductase 4Fe-4S domain APA07_RS14720 PF08521 Two-component sensor kinase N-terminal APA07_RS14720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APA07_RS14720 PF00512 His Kinase A (phospho-acceptor) domain APA07_RS14725 PF00486 Transcriptional regulatory protein, C terminal APA07_RS14725 PF00072 Response regulator receiver domain APA07_RS14730 PF00873 AcrB/AcrD/AcrF family APA07_RS14770 PF01717 Cobalamin-independent synthase, Catalytic domain APA07_RS14770 PF08267 Cobalamin-independent synthase, N-terminal domain APA07_RS14775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APA07_RS14775 PF03466 LysR substrate binding domain APA07_RS14780 PF13340 Putative transposase of IS4/5 family (DUF4096) APA07_RS14795 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system APA07_RS14805 PF03358 NADPH-dependent FMN reductase APA07_RS14810 PF02040 Arsenical pump membrane protein APA07_RS14815 PF03960 ArsC family APA07_RS14830 PF18766 SWI2/SNF2 ATPase APA07_RS14830 PF11867 Domain of unknown function (DUF3387) APA07_RS14830 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) APA07_RS14840 PF12161 HsdM N-terminal domain APA07_RS14840 PF02384 N-6 DNA Methylase APA07_RS14850 PF13276 HTH-like domain APA07_RS14850 PF13333 Integrase core domain APA07_RS14850 PF00665 Integrase core domain APA07_RS14855 PF01527 Transposase APA07_RS14865 PF03960 ArsC family APA07_RS14870 PF02040 Arsenical pump membrane protein APA07_RS14875 PF01527 Transposase APA07_RS14880 PF13333 Integrase core domain APA07_RS14880 PF00665 Integrase core domain APA07_RS14880 PF13276 HTH-like domain APA07_RS14890 PF03466 LysR substrate binding domain APA07_RS14890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APA07_RS14915 PF01850 PIN domain APA07_RS14920 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin APA07_RS14925 PF00239 Resolvase, N terminal domain APA07_RS14935 PF01527 Transposase APA07_RS14940 PF13333 Integrase core domain APA07_RS14940 PF00665 Integrase core domain APA07_RS14940 PF13276 HTH-like domain APA07_RS14945 PF02705 K+ potassium transporter APA07_RS14950 PF13333 Integrase core domain APA07_RS14950 PF00665 Integrase core domain APA07_RS14950 PF13276 HTH-like domain APA07_RS14955 PF01527 Transposase APA07_RS14960 PF02705 K+ potassium transporter APA07_RS14965 PF01695 IstB-like ATP binding protein APA07_RS14985 PF13333 Integrase core domain APA07_RS14985 PF13276 HTH-like domain APA07_RS14985 PF00665 Integrase core domain APA07_RS15015 PF00437 Type II/IV secretion system protein APA07_RS15035 PF05016 ParE toxin of type II toxin-antitoxin system, parDE APA07_RS15045 PF01527 Transposase APA07_RS15050 PF13276 HTH-like domain APA07_RS15050 PF00665 Integrase core domain APA07_RS15050 PF13333 Integrase core domain APA07_RS15070 PF00106 short chain dehydrogenase APA07_RS15075 PF01527 Transposase APA07_RS15080 PF00665 Integrase core domain APA07_RS15080 PF13276 HTH-like domain APA07_RS15080 PF13333 Integrase core domain APA07_RS15085 PF13276 HTH-like domain APA07_RS15085 PF13333 Integrase core domain APA07_RS15085 PF00665 Integrase core domain APA07_RS15120 PF13333 Integrase core domain APA07_RS15120 PF00665 Integrase core domain APA07_RS15120 PF13276 HTH-like domain APA07_RS15125 PF01527 Transposase APA07_RS15140 PF02899 Phage integrase, N-terminal SAM-like domain APA07_RS15140 PF00589 Phage integrase family APA07_RS15150 PF00873 AcrB/AcrD/AcrF family APA07_RS15170 PF09278 MerR, DNA binding APA07_RS15170 PF00376 MerR family regulatory protein APA07_RS15185 PF03814 Potassium-transporting ATPase A subunit APA07_RS15195 PF02669 K+-transporting ATPase, c chain APA07_RS15200 PF02702 Osmosensitive K+ channel His kinase sensor domain APA07_RS15200 PF13492 GAF domain APA07_RS15200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APA07_RS15200 PF13493 Domain of unknown function (DUF4118) APA07_RS15200 PF00512 His Kinase A (phospho-acceptor) domain APA07_RS15205 PF00486 Transcriptional regulatory protein, C terminal APA07_RS15205 PF00072 Response regulator receiver domain APA07_RS15215 PF00106 short chain dehydrogenase APA07_RS15240 PF02384 N-6 DNA Methylase APA07_RS15250 PF00589 Phage integrase family APA07_RS15270 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin APA07_RS15275 PF01850 PIN domain APA07_RS15280 PF00665 Integrase core domain APA07_RS15285 PF01695 IstB-like ATP binding protein APA07_RS15290 PF01845 CcdB protein APA07_RS15320 PF00665 Integrase core domain APA07_RS15330 PF02195 ParB-like nuclease domain APA07_RS15330 PF17762 HTH domain found in ParB protein APA07_RS15355 PF13340 Putative transposase of IS4/5 family (DUF4096) APA07_RS15365 PF00589 Phage integrase family APA07_RS15365 PF02899 Phage integrase, N-terminal SAM-like domain APA07_RS15390 PF13333 Integrase core domain APA07_RS15390 PF00665 Integrase core domain APA07_RS15390 PF13276 HTH-like domain APA07_RS15395 PF01527 Transposase APA07_RS15420 PF02796 Helix-turn-helix domain of resolvase APA07_RS15420 PF00239 Resolvase, N terminal domain APA07_RS15440 PF13333 Integrase core domain APA07_RS15440 PF00665 Integrase core domain APA07_RS15440 PF13276 HTH-like domain APA07_RS15445 PF01527 Transposase APA07_RS15460 PF01609 Transposase DDE domain APA07_RS15465 PF13276 HTH-like domain APA07_RS15465 PF13333 Integrase core domain APA07_RS15465 PF00665 Integrase core domain APA07_RS15470 PF01527 Transposase APA07_RS15480 PF00239 Resolvase, N terminal domain APA07_RS15480 PF02796 Helix-turn-helix domain of resolvase APA07_RS15485 PF09299 Mu transposase, C-terminal APA07_RS15485 PF00665 Integrase core domain APA07_RS15490 PF13401 AAA domain APA07_RS15495 PF02796 Helix-turn-helix domain of resolvase APA07_RS15495 PF00239 Resolvase, N terminal domain APA07_RS15510 PF10134 Replication initiator protein A APA07_RS15560 PF17841 BID domain of Bartonella effector protein (Bep) APA07_RS15560 PF03389 MobA/MobL family APA07_RS15560 PF01443 Viral (Superfamily 1) RNA helicase APA07_RS15570 PF01850 PIN domain APA07_RS15585 PF02796 Helix-turn-helix domain of resolvase APA07_RS15585 PF00239 Resolvase, N terminal domain APA07_RS15600 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system APA07_RS15610 PF12146 Serine aminopeptidase, S33 APA07_RS15615 PF13276 HTH-like domain APA07_RS15615 PF00665 Integrase core domain APA07_RS15615 PF13333 Integrase core domain APA07_RS15620 PF01527 Transposase APA07_RS15625 PF10544 T5orf172 domain APA07_RS15640 PF13784 Fic/DOC family N-terminal APA07_RS15640 PF02661 Fic/DOC family APA07_RS15665 PF00239 Resolvase, N terminal domain APA07_RS15665 PF02796 Helix-turn-helix domain of resolvase APA07_RS15685 PF01527 Transposase APA07_RS15690 PF00665 Integrase core domain APA07_RS15690 PF13333 Integrase core domain APA07_RS15690 PF13276 HTH-like domain APA07_RS15695 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system APA07_RS15715 PF03389 MobA/MobL family APA07_RS15765 PF01381 Helix-turn-helix