APA12_RS00045 SM00464 Found in ATP-dependent protease La (LON) APA12_RS00075 SM00932 Scaffold protein Nfu/NifU N terminal APA12_RS00095 SM01209 APA12_RS00095 APA12_RS00095 SM01210 APA12_RS00095 APA12_RS00125 SM00829 Enoylreductase APA12_RS00140 SM01002 Alanine dehydrogenase/PNT, C-terminal domain APA12_RS00140 SM01003 Alanine dehydrogenase/PNT, N-terminal domain APA12_RS00145 SM00859 Semialdehyde dehydrogenase, NAD binding domain APA12_RS00190 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain APA12_RS00195 SM00861 Transketolase, pyrimidine binding domain APA12_RS00220 SM00382 ATPases associated with a variety of cellular activities APA12_RS00260 SM00382 ATPases associated with a variety of cellular activities APA12_RS00270 SM00493 APA12_RS00270 APA12_RS00280 SM00905 Dihydroneopterin aldolase APA12_RS00300 SM00316 Ribosomal protein S1-like RNA-binding domain APA12_RS00335 SM00937 APA12_RS00335 APA12_RS00390 SM00917 LeuA allosteric (dimerisation) domain APA12_RS00410 SM00387 Histidine kinase-like ATPases APA12_RS00410 SM00388 His Kinase A (phosphoacceptor) domain APA12_RS00410 SM00448 cheY-homologous receiver domain APA12_RS00430 SM00986 Uracil DNA glycosylase superfamily APA12_RS00430 SM00987 UreE urease accessory protein, C-terminal domain APA12_RS00440 SM00564 beta-propeller repeat APA12_RS00490 SM00490 helicase superfamily c-terminal domain APA12_RS00500 SM00347 helix_turn_helix multiple antibiotic resistance protein APA12_RS00545 SM00490 helicase superfamily c-terminal domain APA12_RS00565 SM00919 Malic enzyme, NAD binding domain APA12_RS00565 SM01274 APA12_RS00565 APA12_RS00570 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. APA12_RS00570 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. APA12_RS00610 SM00382 ATPases associated with a variety of cellular activities APA12_RS00625 SM00341 Helicase and RNase D C-terminal APA12_RS00625 SM00474 3'-5' exonuclease APA12_RS00650 SM00382 ATPases associated with a variety of cellular activities APA12_RS00690 SM00342 helix_turn_helix, arabinose operon control protein APA12_RS00725 SM00357 Cold shock protein domain APA12_RS00785 SM00421 helix_turn_helix, Lux Regulon APA12_RS00785 SM00448 cheY-homologous receiver domain APA12_RS00790 SM00387 Histidine kinase-like ATPases APA12_RS00790 SM00388 His Kinase A (phosphoacceptor) domain APA12_RS00790 SM00448 cheY-homologous receiver domain APA12_RS00810 SM00382 ATPases associated with a variety of cellular activities APA12_RS00815 SM00382 ATPases associated with a variety of cellular activities APA12_RS00870 SM00331 Sigma factor PP2C-like phosphatases APA12_RS00870 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain APA12_RS00875 SM00220 Serine/Threonine protein kinases, catalytic domain APA12_RS00880 SM00220 Serine/Threonine protein kinases, catalytic domain APA12_RS00950 SM00347 helix_turn_helix multiple antibiotic resistance protein APA12_RS01020 SM00028 Tetratricopeptide repeats APA12_RS01050 SM00867 YceI-like domain APA12_RS01070 SM00382 ATPases associated with a variety of cellular activities APA12_RS01090 SM00271 DnaJ molecular chaperone homology domain APA12_RS01210 SM00487 DEAD-like helicases superfamily APA12_RS01210 SM00490 helicase superfamily c-terminal domain APA12_RS01310 SM01133 APA12_RS01310 APA12_RS01320 SM01040 BRO family, N-terminal domain APA12_RS01415 SM00382 ATPases associated with a variety of cellular activities APA12_RS01415 SM01086 C-terminal, D2-small domain, of ClpB protein APA12_RS01445 SM00387 Histidine kinase-like ATPases APA12_RS01445 SM00388 His Kinase A (phosphoacceptor) domain APA12_RS01450 SM00448 cheY-homologous receiver domain APA12_RS01450 SM00862 Transcriptional regulatory protein, C terminal APA12_RS01465 SM00271 DnaJ molecular chaperone homology domain APA12_RS01485 SM00798 AICARFT/IMPCHase bienzyme APA12_RS01485 SM00851 MGS-like domain APA12_RS01525 SM00530 Helix-turn-helix XRE-family like proteins APA12_RS01550 SM00357 Cold shock protein domain APA12_RS01550 SM00382 ATPases associated with a variety of cellular activities APA12_RS01550 SM00959 Rho termination factor, N-terminal domain APA12_RS01585 SM00382 ATPases associated with a variety of cellular activities APA12_RS01595 SM00788 Adenylosuccinate synthetase APA12_RS01600 SM00448 cheY-homologous receiver domain APA12_RS01600 SM00862 Transcriptional regulatory protein, C terminal APA12_RS01605 SM00387 Histidine kinase-like ATPases APA12_RS01605 SM00388 His Kinase A (phosphoacceptor) domain APA12_RS01635 SM01091 Transporter associated domain APA12_RS01640 SM00829 Enoylreductase APA12_RS01645 SM00382 ATPases associated with a variety of cellular activities APA12_RS01665 SM00822 APA12_RS01665 APA12_RS01670 SM00859 Semialdehyde dehydrogenase, NAD binding domain APA12_RS01785 SM00477 DNA/RNA non-specific endonuclease APA12_RS01785 SM00892 DNA/RNA non-specific endonuclease APA12_RS01800 SM00530 Helix-turn-helix XRE-family like proteins APA12_RS01900 SM00450 Rhodanese Homology Domain APA12_RS01975 SM00729 Elongator protein 3, MiaB family, Radical SAM APA12_RS01990 SM00861 Transketolase, pyrimidine binding domain APA12_RS02005 SM01091 Transporter associated domain APA12_RS02015 SM00986 Uracil DNA glycosylase superfamily APA12_RS02015 SM00987 UreE urease accessory protein, C-terminal domain APA12_RS02020 SM00028 Tetratricopeptide repeats APA12_RS02060 SM00382 ATPases associated with a variety of cellular activities APA12_RS02070 SM01400 APA12_RS02070 APA12_RS02075 SM00855 Phosphoglycerate mutase family APA12_RS02110 SM00822 APA12_RS02110 APA12_RS02145 SM00382 ATPases associated with a variety of cellular activities APA12_RS02195 SM00421 helix_turn_helix, Lux Regulon APA12_RS02340 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain APA12_RS02455 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. APA12_RS02470 SM00974 APA12_RS02470 APA12_RS02545 SM00530 Helix-turn-helix XRE-family like proteins APA12_RS02575 SM00857 Resolvase, N terminal domain APA12_RS02585 SM00729 Elongator protein 3, MiaB family, Radical SAM APA12_RS02620 SM00450 Rhodanese Homology Domain APA12_RS02790 SM00822 APA12_RS02790 APA12_RS02845 SM00882 Coenzyme A transferase APA12_RS02900 SM00893 Electron transfer flavoprotein domain APA12_RS02930 SM00893 Electron transfer flavoprotein domain APA12_RS03005 SM00861 Transketolase, pyrimidine binding domain APA12_RS03035 SM00320 WD40 repeats APA12_RS03040 SM00833 Cobalamin synthesis protein cobW C-terminal domain APA12_RS03160 SM01329 APA12_RS03160 APA12_RS03185 SM00938 Nitrogen regulatory protein P-II APA12_RS03190 SM01230 APA12_RS03190 APA12_RS03200 SM00564 beta-propeller repeat APA12_RS03215 SM00838 Elongation factor G C-terminus APA12_RS03230 SM00487 DEAD-like helicases superfamily APA12_RS03230 SM00490 helicase superfamily c-terminal domain APA12_RS03240 SM00947 Carbonic anhydrase APA12_RS03255 SM01409 APA12_RS03255 APA12_RS03260 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. APA12_RS03260 SM00954 Region found in RelA / SpoT proteins APA12_RS03275 SM00358 Double-stranded RNA binding motif APA12_RS03275 SM00535 Ribonuclease III family APA12_RS03310 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APA12_RS03320 SM00935 Outer membrane protein (OmpH-like) APA12_RS03435 SM00382 ATPases associated with a variety of cellular activities APA12_RS03450 SM00116 Domain in cystathionine beta-synthase and other proteins. APA12_RS03455 SM00474 3'-5' exonuclease APA12_RS03460 SM00967 RNA 2'-O ribose methyltransferase substrate binding APA12_RS03475 SM00072 Guanylate kinase homologues. APA12_RS03505 SM00382 ATPases associated with a variety of cellular activities APA12_RS03520 SM00382 ATPases associated with a variety of cellular activities APA12_RS03560 SM00345 helix_turn_helix gluconate operon transcriptional repressor APA12_RS03560 SM00895 APA12_RS03560 APA12_RS03650 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APA12_RS03655 SM00487 DEAD-like helicases superfamily APA12_RS03655 SM00490 helicase superfamily c-terminal domain APA12_RS03655 SM00847 Helicase associated domain (HA2) Add an annotation APA12_RS03700 SM01007 Class II Aldolase and Adducin N-terminal domain APA12_RS03715 SM00904 Riboflavin kinase APA12_RS03735 SM00853 MutL C terminal dimerisation domain APA12_RS03735 SM01340 APA12_RS03735 APA12_RS03750 SM00387 Histidine kinase-like ATPases APA12_RS03750 SM00433 TopoisomeraseII APA12_RS03785 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APA12_RS03785 SM00245 tail specific protease APA12_RS03790 SM00955 APA12_RS03790 APA12_RS03795 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain APA12_RS03795 SM00437 Bacterial DNA topoisomerase I DNA-binding domain APA12_RS03795 SM00493 APA12_RS03795 APA12_RS03825 SM01207 APA12_RS03825 APA12_RS03860 SM00861 Transketolase, pyrimidine binding domain APA12_RS03885 SM00996 S-adenosyl-L-homocysteine hydrolase APA12_RS03885 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain APA12_RS03890 SM00563 Phosphate acyltransferases APA12_RS03900 SM00849 Metallo-beta-lactamase superfamily APA12_RS03950 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain APA12_RS03985 SM00852 Probable molybdopterin binding domain APA12_RS04035 SM00978 APA12_RS04035 APA12_RS04045 SM01235 APA12_RS04045 APA12_RS04050 SM00463 Small MutS-related domain APA12_RS04155 SM00857 Resolvase, N terminal domain APA12_RS04230 SM00954 Region found in RelA / SpoT proteins APA12_RS04305 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains APA12_RS04350 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APA12_RS04355 SM00829 Enoylreductase APA12_RS04405 SM00479 APA12_RS04405 APA12_RS04460 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain APA12_RS04630 SM00448 cheY-homologous receiver domain APA12_RS04630 SM00862 Transcriptional regulatory protein, C terminal APA12_RS04635 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APA12_RS04635 SM00387 Histidine kinase-like ATPases APA12_RS04635 SM00388 His Kinase A (phosphoacceptor) domain APA12_RS04655 SM00649 Ribosomal protein L11/L12 APA12_RS04680 SM00663 RNA polymerase I subunit A N-terminus APA12_RS04700 SM01403 APA12_RS04700 APA12_RS04720 SM01382 APA12_RS04720 APA12_RS04720 SM01383 APA12_RS04720 APA12_RS04735 SM00322 K homology RNA-binding domain APA12_RS04755 SM01374 APA12_RS04755 APA12_RS04760 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. APA12_RS04825 SM00662 RNA polymerases D APA12_RS04845 SM00382 ATPases associated with a variety of cellular activities APA12_RS04920 SM00382 ATPases associated with a variety of cellular activities APA12_RS04935 SM00382 ATPases associated with a variety of cellular activities APA12_RS04960 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APA12_RS04960 SM00245 tail specific protease APA12_RS04985 SM00851 MGS-like domain APA12_RS04985 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain APA12_RS04990 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain APA12_RS05000 SM00400 zinc finger APA12_RS05000 SM00493 APA12_RS05000 APA12_RS05035 SM00650 Ribosomal RNA adenine dimethylases APA12_RS05065 SM00382 ATPases associated with a variety of cellular activities APA12_RS05070 SM00345 helix_turn_helix gluconate operon transcriptional repressor APA12_RS05070 SM00895 APA12_RS05070 APA12_RS05110 SM00028 Tetratricopeptide repeats APA12_RS05115 SM01058 CarD-like/TRCF domain APA12_RS05140 SM00382 ATPases associated with a variety of cellular activities APA12_RS05155 SM00387 Histidine kinase-like ATPases APA12_RS05155 SM00388 His Kinase A (phosphoacceptor) domain APA12_RS05160 SM00091 PAS domain APA12_RS05160 SM00387 Histidine kinase-like ATPases APA12_RS05160 SM00388 His Kinase A (phosphoacceptor) domain APA12_RS05160 SM00448 cheY-homologous receiver domain APA12_RS05170 SM00382 ATPases associated with a variety of cellular activities APA12_RS05170 SM01086 C-terminal, D2-small domain, of ClpB protein APA12_RS05180 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain APA12_RS05215 SM00873 B3/4 domain APA12_RS05215 SM00874 tRNA synthetase B5 domain APA12_RS05215 SM00896 Ferredoxin-fold anticodon binding domain APA12_RS05235 SM00100 Cyclic nucleotide-monophosphate binding domain APA12_RS05245 SM00363 S4 RNA-binding domain APA12_RS05245 SM01390 APA12_RS05245 APA12_RS05260 SM01329 APA12_RS05260 APA12_RS05295 SM01001 AIR carboxylase APA12_RS05395 SM00855 Phosphoglycerate mutase family APA12_RS05400 SM00830 Chorismate mutase type II APA12_RS05420 SM00968 SMC proteins Flexible Hinge Domain APA12_RS05430 SM00116 Domain in cystathionine beta-synthase and other proteins. APA12_RS05430 SM01091 Transporter associated domain APA12_RS05445 SM00729 Elongator protein 3, MiaB family, Radical SAM APA12_RS05450 SM00563 Phosphate acyltransferases APA12_RS05475 SM00278 Helix-hairpin-helix DNA-binding motif class 1 APA12_RS05475 SM00465 GIY-YIG type nucleases (URI domain) APA12_RS05525 SM00852 Probable molybdopterin binding domain APA12_RS05540 SM01192 APA12_RS05540 APA12_RS05540 SM01193 APA12_RS05540 APA12_RS05570 SM00487 DEAD-like helicases superfamily APA12_RS05570 SM00490 helicase superfamily c-terminal domain APA12_RS05580 SM00487 DEAD-like helicases superfamily APA12_RS05580 SM00490 helicase superfamily c-terminal domain APA12_RS05580 SM00982 APA12_RS05580 APA12_RS05580 SM01058 CarD-like/TRCF domain APA12_RS05605 SM00327 von Willebrand factor (vWF) type A domain APA12_RS05615 SM00271 DnaJ molecular chaperone homology domain APA12_RS05650 SM00729 Elongator protein 3, MiaB family, Radical SAM APA12_RS05700 SM00530 Helix-turn-helix XRE-family like proteins APA12_RS05715 SM00937 APA12_RS05715 APA12_RS05775 SM00936 Penicillin-binding protein 5, C-terminal domain APA12_RS05800 SM00849 Metallo-beta-lactamase superfamily APA12_RS05850 SM00729 Elongator protein 3, MiaB family, Radical SAM APA12_RS05850 SM00876 Biotin and Thiamin Synthesis associated domain APA12_RS05920 SM00825 Beta-ketoacyl synthase APA12_RS05930 SM00822 APA12_RS05930 APA12_RS05935 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. APA12_RS05960 SM00857 Resolvase, N terminal domain APA12_RS05980 SM00357 Cold shock protein domain APA12_RS05990 SM01130 APA12_RS05990 APA12_RS06020 SM00382 ATPases associated with a variety of cellular activities APA12_RS06030 SM00450 Rhodanese Homology Domain APA12_RS06045 SM00155 Phospholipase D. Active site motifs. APA12_RS06075 SM01211 APA12_RS06075 APA12_RS06095 SM00998 Adenylosuccinate lyase C-terminus APA12_RS06130 SM00729 Elongator protein 3, MiaB family, Radical SAM APA12_RS06145 SM00861 Transketolase, pyrimidine binding domain APA12_RS06205 SM00387 Histidine kinase-like ATPases APA12_RS06205 SM00433 TopoisomeraseII APA12_RS06215 SM00480 DNA polymerase III beta subunit APA12_RS06220 SM00382 ATPases associated with a variety of cellular activities APA12_RS06220 SM00760 Bacterial dnaA protein helix-turn-helix domain APA12_RS06230 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain APA12_RS06230 SM01232 APA12_RS06230 APA12_RS06255 SM00382 ATPases associated with a variety of cellular activities APA12_RS06305 SM00822 APA12_RS06305 APA12_RS06350 SM00420 helix_turn_helix, Deoxyribose operon repressor APA12_RS06350 SM01134 APA12_RS06350 APA12_RS06355 SM00341 Helicase and RNase D C-terminal APA12_RS06355 SM00487 DEAD-like helicases superfamily APA12_RS06355 SM00490 helicase superfamily c-terminal domain APA12_RS06355 SM00956 APA12_RS06355 APA12_RS06365 SM00382 ATPases associated with a variety of cellular activities APA12_RS06370 SM00382 ATPases associated with a variety of cellular activities APA12_RS06375 SM00387 Histidine kinase-like ATPases APA12_RS06395 SM00448 cheY-homologous receiver domain APA12_RS06400 SM00382 ATPases associated with a variety of cellular activities APA12_RS06410 SM00829 Enoylreductase APA12_RS06450 SM00382 ATPases associated with a variety of cellular activities APA12_RS06505 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain APA12_RS06510 SM01092 CO dehydrogenase flavoprotein C-terminal domain APA12_RS06585 SM00382 ATPases associated with a variety of cellular activities APA12_RS06655 SM01060 APA12_RS06655 APA12_RS06710 SM00382 ATPases associated with a variety of cellular activities APA12_RS06790 SM00342 helix_turn_helix, arabinose operon control protein APA12_RS06860 SM00965 Secretin and TonB N terminus short domain APA12_RS06875 SM00965 Secretin and TonB N terminus short domain APA12_RS06895 SM00062 Bacterial periplasmic substrate-binding proteins APA12_RS06900 SM00382 ATPases associated with a variety of cellular activities APA12_RS07035 SM00382 ATPases associated with a variety of cellular activities APA12_RS07055 SM00796 Allophanate hydrolase subunit 1 APA12_RS07055 SM00797 Allophanate hydrolase subunit 2 APA12_RS07055 SM00878 Biotin carboxylase C-terminal domain APA12_RS07135 SM00903 Flavin reductase like domain APA12_RS07205 SM00487 DEAD-like helicases superfamily APA12_RS07365 SM00886 Stress responsive A/B Barrel Domain APA12_RS07390 SM00564 beta-propeller repeat APA12_RS07445 SM00890 Domain of unknown function APA12_RS07490 SM00852 Probable molybdopterin binding domain APA12_RS07550 SM00861 Transketolase, pyrimidine binding domain APA12_RS07555 SM00363 S4 RNA-binding domain APA12_RS07600 SM00448 cheY-homologous receiver domain APA12_RS07600 SM00862 Transcriptional regulatory protein, C terminal APA12_RS07620 SM00116 Domain in cystathionine beta-synthase and other proteins. APA12_RS07620 SM01240 APA12_RS07620 APA12_RS07640 SM00382 ATPases associated with a variety of cellular activities APA12_RS07645 SM00382 ATPases associated with a variety of cellular activities APA12_RS07655 SM00014 Acid phosphatase homologues APA12_RS07735 SM00729 Elongator protein 3, MiaB family, Radical SAM APA12_RS07780 SM00382 ATPases associated with a variety of cellular activities APA12_RS07785 SM00382 ATPases associated with a variety of cellular activities APA12_RS07795 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. APA12_RS07805 SM00671 Sel1-like repeats. APA12_RS07820 SM00870 APA12_RS07820 APA12_RS07865 SM00382 ATPases associated with a variety of cellular activities APA12_RS07895 SM00829 Enoylreductase APA12_RS07995 SM01266 APA12_RS07995 APA12_RS08040 SM00387 Histidine kinase-like ATPases APA12_RS08040 SM00388 His Kinase A (phosphoacceptor) domain APA12_RS08045 SM00448 cheY-homologous receiver domain APA12_RS08045 SM00862 Transcriptional regulatory protein, C terminal APA12_RS08220 SM00346 helix_turn_helix isocitrate lyase regulation APA12_RS08230 SM00382 ATPases associated with a variety of cellular activities APA12_RS08245 SM00849 Metallo-beta-lactamase superfamily APA12_RS08290 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region APA12_RS08295 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region APA12_RS08340 SM00411 bacterial (prokaryotic) histone like domain APA12_RS08345 SM00382 ATPases associated with a variety of cellular activities APA12_RS08345 SM00464 Found in ATP-dependent protease La (LON) APA12_RS08350 SM00382 ATPases associated with a variety of cellular activities APA12_RS08350 SM00994 ClpX C4-type zinc finger APA12_RS08350 SM01086 C-terminal, D2-small domain, of ClpB protein APA12_RS08385 SM00487 DEAD-like helicases superfamily APA12_RS08385 SM00490 helicase superfamily c-terminal domain APA12_RS08420 SM00382 ATPases associated with a variety of cellular activities APA12_RS08450 SM00838 Elongation factor G C-terminus APA12_RS08450 SM00889 Elongation factor G, domain IV APA12_RS08465 SM00382 ATPases associated with a variety of cellular activities APA12_RS08475 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. APA12_RS08480 SM00533 DNA-binding domain of DNA mismatch repair MUTS family APA12_RS08480 SM00534 ATPase domain of DNA mismatch repair MUTS family APA12_RS08485 SM00028 Tetratricopeptide repeats APA12_RS08515 SM00978 APA12_RS08515 APA12_RS08555 SM00344 helix_turn_helix ASNC type APA12_RS08575 SM00411 bacterial (prokaryotic) histone like domain APA12_RS08580 SM00986 Uracil DNA glycosylase superfamily APA12_RS08580 SM00987 UreE urease accessory protein, C-terminal domain APA12_RS08600 SM00422 helix_turn_helix, mercury resistance APA12_RS08605 SM00411 bacterial (prokaryotic) histone like domain APA12_RS08635 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APA12_RS08635 SM00387 Histidine kinase-like ATPases APA12_RS08635 SM00388 His Kinase A (phosphoacceptor) domain APA12_RS08640 SM00448 cheY-homologous receiver domain APA12_RS08640 SM00862 Transcriptional regulatory protein, C terminal APA12_RS08645 SM00347 helix_turn_helix multiple antibiotic resistance protein APA12_RS08665 SM01329 APA12_RS08665 APA12_RS08700 SM00382 ATPases associated with a variety of cellular activities APA12_RS08700 SM00962 SRP54-type protein, GTPase domain APA12_RS08700 SM00963 SRP54-type protein, helical bundle domain APA12_RS08720 SM00363 S4 RNA-binding domain APA12_RS08725 SM00382 ATPases associated with a variety of cellular activities APA12_RS08755 SM00382 ATPases associated with a variety of cellular activities APA12_RS08760 SM00564 beta-propeller repeat APA12_RS08830 SM00382 ATPases associated with a variety of cellular activities APA12_RS08830 SM01086 C-terminal, D2-small domain, of ClpB protein APA12_RS08850 SM00382 ATPases associated with a variety of cellular activities APA12_RS08850 SM00448 cheY-homologous receiver domain APA12_RS08855 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APA12_RS08855 SM00387 Histidine kinase-like ATPases APA12_RS08855 SM00388 His Kinase A (phosphoacceptor) domain APA12_RS08860 SM00382 ATPases associated with a variety of cellular activities APA12_RS08860 SM00448 cheY-homologous receiver domain APA12_RS08865 SM00091 PAS domain APA12_RS08865 SM00387 Histidine kinase-like ATPases APA12_RS08865 SM00388 His Kinase A (phosphoacceptor) domain APA12_RS08945 SM00984 UDP binding domain APA12_RS08955 SM00938 Nitrogen regulatory protein P-II APA12_RS08960 SM00971 Serine acetyltransferase, N-terminal APA12_RS09020 SM00841 Elongation factor P, C-terminal APA12_RS09020 SM01185 APA12_RS09020 APA12_RS09030 SM00491 APA12_RS09030 APA12_RS09035 SM00357 Cold shock protein domain APA12_RS09045 SM00883 Chaperonin 10 Kd subunit APA12_RS09245 SM00607 eel-Fucolectin Tachylectin-4 Pentaxrin-1 Domain APA12_RS09275 SM00487 DEAD-like helicases superfamily APA12_RS09275 SM00490 helicase superfamily c-terminal domain APA12_RS09280 SM01323 APA12_RS09280 APA12_RS09330 SM00852 Probable molybdopterin binding domain APA12_RS09565 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase APA12_RS09665 SM00842 Cell division protein FtsA APA12_RS09670 SM00864 Tubulin/FtsZ family, GTPase domain APA12_RS09670 SM00865 Tubulin/FtsZ family, C-terminal domain APA12_RS09690 SM00292 breast cancer carboxy-terminal domain APA12_RS09690 SM00532 Ligase N family APA12_RS09810 SM00487 DEAD-like helicases superfamily APA12_RS09810 SM00490 helicase superfamily c-terminal domain APA12_RS09840 SM01004 Delta-aminolevulinic acid dehydratase APA12_RS09850 SM00434 DNA Topoisomerase IV APA12_RS09895 SM00481 DNA polymerase alpha chain like domain APA12_RS09935 SM00507 HNH nucleases APA12_RS09955 SM00729 Elongator protein 3, MiaB family, Radical SAM APA12_RS09960 SM00562 APA12_RS09960 APA12_RS09965 SM00382 ATPases associated with a variety of cellular activities APA12_RS09975 SM00448 cheY-homologous receiver domain APA12_RS09975 SM00862 Transcriptional regulatory protein, C terminal APA12_RS09980 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APA12_RS09980 SM00387 Histidine kinase-like ATPases APA12_RS09995 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain APA12_RS10005 SM00028 Tetratricopeptide repeats APA12_RS10085 SM00646 APA12_RS10085 APA12_RS10090 SM00316 Ribosomal protein S1-like RNA-binding domain APA12_RS10105 SM00316 Ribosomal protein S1-like RNA-binding domain APA12_RS10240 SM00507 HNH nucleases APA12_RS10285 SM01040 BRO family, N-terminal domain APA12_RS10320 SM00479 APA12_RS10320 APA12_RS10410 SM00460 Transglutaminase/protease-like homologues APA12_RS10520 SM00797 Allophanate hydrolase subunit 2 APA12_RS10525 SM00796 Allophanate hydrolase subunit 1 APA12_RS10540 SM00878 Biotin carboxylase C-terminal domain APA12_RS10570 SM00642 Alpha-amylase domain APA12_RS10575 SM00642 Alpha-amylase domain APA12_RS10580 SM00642 Alpha-amylase domain APA12_RS10590 SM00642 Alpha-amylase domain APA12_RS10760 SM00836 DALR anticodon binding domain APA12_RS10760 SM01016 Arginyl tRNA synthetase N terminal dom APA12_RS10765 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. APA12_RS10810 SM00729 Elongator protein 3, MiaB family, Radical SAM APA12_RS10855 SM00363 S4 RNA-binding domain APA12_RS10865 SM00382 ATPases associated with a variety of cellular activities APA12_RS10885 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs APA12_RS10885 SM00474 3'-5' exonuclease APA12_RS10885 SM00475 5'-3' exonuclease APA12_RS10885 SM00482 DNA polymerase A domain APA12_RS10895 SM00563 Phosphate acyltransferases APA12_RS10945 SM00564 beta-propeller repeat APA12_RS10965 SM00345 helix_turn_helix gluconate operon transcriptional repressor APA12_RS11005 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. APA12_RS11035 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family APA12_RS11105 SM00530 Helix-turn-helix XRE-family like proteins APA12_RS11120 SM00382 ATPases associated with a variety of cellular activities APA12_RS11150 SM00347 helix_turn_helix multiple antibiotic resistance protein APA12_RS11160 SM00903 Flavin reductase like domain APA12_RS11165 SM01007 Class II Aldolase and Adducin N-terminal domain APA12_RS11180 SM00822 APA12_RS11180 APA12_RS11215 SM00564 beta-propeller repeat APA12_RS11265 SM00382 ATPases associated with a variety of cellular activities APA12_RS11290 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. APA12_RS11300 SM00671 Sel1-like repeats. APA12_RS11415 SM00855 Phosphoglycerate mutase family APA12_RS11430 SM00833 Cobalamin synthesis protein cobW C-terminal domain APA12_RS11445 SM00347 helix_turn_helix multiple antibiotic resistance protein APA12_RS11465 SM00903 Flavin reductase like domain APA12_RS11475 SM00382 ATPases associated with a variety of cellular activities APA12_RS11540 SM00857 Resolvase, N terminal domain APA12_RS11700 SM00382 ATPases associated with a variety of cellular activities APA12_RS11725 SM00248 ankyrin repeats APA12_RS11730 SM00861 Transketolase, pyrimidine binding domain APA12_RS11740 SM01350 APA12_RS11740 APA12_RS11785 SM00829 Enoylreductase APA12_RS11800 SM00729 Elongator protein 3, MiaB family, Radical SAM APA12_RS11820 SM00382 ATPases associated with a variety of cellular activities APA12_RS11845 SM00387 Histidine kinase-like ATPases APA12_RS11845 SM00388 His Kinase A (phosphoacceptor) domain APA12_RS11845 SM00448 cheY-homologous receiver domain APA12_RS11850 SM00421 helix_turn_helix, Lux Regulon APA12_RS11850 SM00448 cheY-homologous receiver domain APA12_RS11900 SM00988 UreE urease accessory protein, N-terminal domain APA12_RS11970 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APA12_RS11980 SM00849 Metallo-beta-lactamase superfamily APA12_RS12070 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain APA12_RS12085 SM00347 helix_turn_helix multiple antibiotic resistance protein APA12_RS12105 SM00382 ATPases associated with a variety of cellular activities APA12_RS12155 SM00857 Resolvase, N terminal domain APA12_RS12160 SM00530 Helix-turn-helix XRE-family like proteins APA12_RS12275 SM00849 Metallo-beta-lactamase superfamily APA12_RS12355 SM00434 DNA Topoisomerase IV APA12_RS12370 SM00316 Ribosomal protein S1-like RNA-binding domain APA12_RS12370 SM00322 K homology RNA-binding domain APA12_RS12375 SM01387 APA12_RS12375 APA12_RS12390 SM00382 ATPases associated with a variety of cellular activities APA12_RS12420 SM00671 Sel1-like repeats. APA12_RS12430 SM00382 ATPases associated with a variety of cellular activities APA12_RS12440 SM01018 B12 binding domain APA12_RS12515 SM00382 ATPases associated with a variety of cellular activities APA12_RS12515 SM00962 SRP54-type protein, GTPase domain APA12_RS12515 SM00963 SRP54-type protein, helical bundle domain APA12_RS12520 SM00729 Elongator protein 3, MiaB family, Radical SAM APA12_RS12540 SM00487 DEAD-like helicases superfamily APA12_RS12540 SM00490 helicase superfamily c-terminal domain APA12_RS12580 SM00382 ATPases associated with a variety of cellular activities APA12_RS12605 SM00829 Enoylreductase APA12_RS12615 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APA12_RS12675 SM01005 Alanine racemase, C-terminal domain APA12_RS12680 SM00344 helix_turn_helix ASNC type APA12_RS12700 SM00316 Ribosomal protein S1-like RNA-binding domain APA12_RS12700 SM00322 K homology RNA-binding domain APA12_RS12715 SM00382 ATPases associated with a variety of cellular activities APA12_RS12730 SM00062 Bacterial periplasmic substrate-binding proteins APA12_RS12730 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. APA12_RS12735 SM00382 ATPases associated with a variety of cellular activities APA12_RS12745 SM00382 ATPases associated with a variety of cellular activities APA12_RS12785 SM00878 Biotin carboxylase C-terminal domain APA12_RS12855 SM00732 Likely ribonuclease with RNase H fold. APA12_RS12870 SM00845 GatB domain APA12_RS12880 SM00382 ATPases associated with a variety of cellular activities APA12_RS12885 SM00478 endonuclease III APA12_RS12895 SM00478 endonuclease III APA12_RS12975 SM00893 Electron transfer flavoprotein domain APA12_RS12980 SM00893 Electron transfer flavoprotein domain APA12_RS12995 SM00729 Elongator protein 3, MiaB family, Radical SAM APA12_RS13005 SM00100 Cyclic nucleotide-monophosphate binding domain APA12_RS13005 SM00419 helix_turn_helix, cAMP Regulatory protein APA12_RS13010 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APA12_RS13025 SM00363 S4 RNA-binding domain APA12_RS13065 SM00857 Resolvase, N terminal domain APA12_RS13115 SM00855 Phosphoglycerate mutase family APA12_RS13150 SM00382 ATPases associated with a variety of cellular activities APA12_RS13150 SM00843 APA12_RS13150 APA12_RS13200 SM00840 APA12_RS13200 APA12_RS13240 SM00448 cheY-homologous receiver domain APA12_RS13240 SM00862 Transcriptional regulatory protein, C terminal APA12_RS13255 SM00382 ATPases associated with a variety of cellular activities APA12_RS13300 SM00382 ATPases associated with a variety of cellular activities APA12_RS13305 SM00278 Helix-hairpin-helix DNA-binding motif class 1 APA12_RS13320 SM00957 SecA DEAD-like domain APA12_RS13320 SM00958 SecA preprotein cross-linking domain APA12_RS13355 SM00271 DnaJ molecular chaperone homology domain APA12_RS13390 SM00411 bacterial (prokaryotic) histone like domain APA12_RS13485 SM00470 ParB-like nuclease domain APA12_RS13500 SM01228 APA12_RS13500 APA12_RS13605 SM00857 Resolvase, N terminal domain APA12_RS13610 SM00885 D5 N terminal like APA12_RS13615 SM00943 Bifunctional DNA primase/polymerase, N-terminal APA12_RS13905 SM00316 Ribosomal protein S1-like RNA-binding domain APA12_RS14010 SM00448 cheY-homologous receiver domain APA12_RS14155 SM00490 helicase superfamily c-terminal domain APA12_RS15010 SM00564 beta-propeller repeat APA12_RS15365 SM00387 Histidine kinase-like ATPases APA12_RS15365 SM00388 His Kinase A (phosphoacceptor) domain APA12_RS15365 SM00448 cheY-homologous receiver domain APA12_RS15585 SM01002 Alanine dehydrogenase/PNT, C-terminal domain APA12_RS15765 SM00530 Helix-turn-helix XRE-family like proteins