APA12_RS12270 1e97cb4915215924ccba26665ef60233 176 PANTHER PTHR37953 11 176 1.8E-28 T 19-04-2016 APA12_RS12270 1e97cb4915215924ccba26665ef60233 176 PANTHER PTHR37953:SF1 11 176 1.8E-28 T 19-04-2016 APA12_RS12270 1e97cb4915215924ccba26665ef60233 176 Pfam PF02643 Uncharacterized ACR, COG1430 66 168 5.4E-30 T 19-04-2016 IPR003795 Protein of unknown function DUF192 APA12_RS13255 4e37e2c9bd7e575ed8cd8e59b15fd532 645 Pfam PF06480 FtsH Extracellular 10 96 5.6E-11 T 19-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 APA12_RS13255 4e37e2c9bd7e575ed8cd8e59b15fd532 645 Gene3D G3DSA:3.40.50.300 147 335 5.9E-65 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS13255 4e37e2c9bd7e575ed8cd8e59b15fd532 645 SUPERFAMILY SSF52540 145 395 1.48E-73 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS13255 4e37e2c9bd7e575ed8cd8e59b15fd532 645 SUPERFAMILY SSF140990 406 603 2.22E-73 T 19-04-2016 APA12_RS13255 4e37e2c9bd7e575ed8cd8e59b15fd532 645 Gene3D G3DSA:1.10.8.60 336 408 5.4E-27 T 19-04-2016 APA12_RS13255 4e37e2c9bd7e575ed8cd8e59b15fd532 645 Pfam PF01434 Peptidase family M41 386 594 1.1E-77 T 19-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 APA12_RS13255 4e37e2c9bd7e575ed8cd8e59b15fd532 645 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 192 324 1.2E-45 T 19-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APA12_RS13255 4e37e2c9bd7e575ed8cd8e59b15fd532 645 SMART SM00382 188 327 2.4E-25 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS13255 4e37e2c9bd7e575ed8cd8e59b15fd532 645 PANTHER PTHR23076 6 607 0.0 T 19-04-2016 APA12_RS13255 4e37e2c9bd7e575ed8cd8e59b15fd532 645 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 105 595 1.7E-231 T 19-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 APA12_RS13255 4e37e2c9bd7e575ed8cd8e59b15fd532 645 ProSitePatterns PS00674 AAA-protein family signature. 295 313 - T 19-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 APA12_RS13255 4e37e2c9bd7e575ed8cd8e59b15fd532 645 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 608 37.349 T 19-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 APA12_RS10720 3ecd50993edfc7ff76dcc19eaa0d0685 730 SUPERFAMILY SSF52833 629 725 6.09E-14 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS10720 3ecd50993edfc7ff76dcc19eaa0d0685 730 Gene3D G3DSA:3.40.30.10 627 714 2.6E-12 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS10720 3ecd50993edfc7ff76dcc19eaa0d0685 730 PANTHER PTHR32234:SF3 30 730 5.6E-133 T 19-04-2016 APA12_RS10720 3ecd50993edfc7ff76dcc19eaa0d0685 730 Pfam PF11412 Disulphide bond corrector protein DsbC 79 191 1.6E-19 T 19-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain APA12_RS10720 3ecd50993edfc7ff76dcc19eaa0d0685 730 Pfam PF13899 Thioredoxin-like 627 705 1.4E-13 T 19-04-2016 APA12_RS10720 3ecd50993edfc7ff76dcc19eaa0d0685 730 PANTHER PTHR32234 30 730 5.6E-133 T 19-04-2016 APA12_RS03750 88e421dc22f8dabed1ec3a9db03adf84 679 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 59 204 1.3E-21 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS03750 88e421dc22f8dabed1ec3a9db03adf84 679 SUPERFAMILY SSF56719 435 671 4.18E-76 T 19-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 APA12_RS03750 88e421dc22f8dabed1ec3a9db03adf84 679 ProSitePatterns PS00177 DNA topoisomerase II signature. 463 471 - T 19-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS03750 88e421dc22f8dabed1ec3a9db03adf84 679 SUPERFAMILY SSF54211 291 432 9.86E-37 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APA12_RS03750 88e421dc22f8dabed1ec3a9db03adf84 679 Gene3D G3DSA:3.40.50.670 445 658 2.6E-79 T 19-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS03750 88e421dc22f8dabed1ec3a9db03adf84 679 Pfam PF01751 Toprim domain 460 570 9.2E-18 T 19-04-2016 IPR006171 Toprim domain APA12_RS03750 88e421dc22f8dabed1ec3a9db03adf84 679 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 604 667 2.0E-21 T 19-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS03750 88e421dc22f8dabed1ec3a9db03adf84 679 PANTHER PTHR10169:SF45 12 644 3.4E-200 T 19-04-2016 APA12_RS03750 88e421dc22f8dabed1ec3a9db03adf84 679 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 32 670 1.5E-225 T 19-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APA12_RS03750 88e421dc22f8dabed1ec3a9db03adf84 679 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 31 675 42.436 T 19-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APA12_RS03750 88e421dc22f8dabed1ec3a9db03adf84 679 SMART SM00433 63 671 8.5E-263 T 19-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS03750 88e421dc22f8dabed1ec3a9db03adf84 679 SMART SM00387 59 205 4.3E-26 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS03750 88e421dc22f8dabed1ec3a9db03adf84 679 Gene3D G3DSA:3.30.565.10 34 234 1.5E-76 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS03750 88e421dc22f8dabed1ec3a9db03adf84 679 Pfam PF00204 DNA gyrase B 293 432 3.4E-40 T 19-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS03750 88e421dc22f8dabed1ec3a9db03adf84 679 Gene3D G3DSA:3.30.230.10 291 433 2.5E-38 T 19-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APA12_RS03750 88e421dc22f8dabed1ec3a9db03adf84 679 PANTHER PTHR10169 12 644 3.4E-200 T 19-04-2016 APA12_RS03750 88e421dc22f8dabed1ec3a9db03adf84 679 PRINTS PR01098 Topoisomerase IV subunit B signature 551 567 1.0E-12 T 19-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APA12_RS03750 88e421dc22f8dabed1ec3a9db03adf84 679 PRINTS PR01098 Topoisomerase IV subunit B signature 407 432 1.0E-12 T 19-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APA12_RS03750 88e421dc22f8dabed1ec3a9db03adf84 679 PRINTS PR01098 Topoisomerase IV subunit B signature 383 406 1.0E-12 T 19-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APA12_RS03750 88e421dc22f8dabed1ec3a9db03adf84 679 PRINTS PR01098 Topoisomerase IV subunit B signature 206 223 1.0E-12 T 19-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APA12_RS03750 88e421dc22f8dabed1ec3a9db03adf84 679 PRINTS PR01098 Topoisomerase IV subunit B signature 495 516 1.0E-12 T 19-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APA12_RS03750 88e421dc22f8dabed1ec3a9db03adf84 679 PRINTS PR01098 Topoisomerase IV subunit B signature 58 71 1.0E-12 T 19-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APA12_RS03750 88e421dc22f8dabed1ec3a9db03adf84 679 PRINTS PR01098 Topoisomerase IV subunit B signature 585 607 1.0E-12 T 19-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APA12_RS03750 88e421dc22f8dabed1ec3a9db03adf84 679 PRINTS PR00418 DNA topoisomerase II family signature 142 156 4.4E-64 T 19-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS03750 88e421dc22f8dabed1ec3a9db03adf84 679 PRINTS PR00418 DNA topoisomerase II family signature 527 543 4.4E-64 T 19-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS03750 88e421dc22f8dabed1ec3a9db03adf84 679 PRINTS PR00418 DNA topoisomerase II family signature 545 562 4.4E-64 T 19-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS03750 88e421dc22f8dabed1ec3a9db03adf84 679 PRINTS PR00418 DNA topoisomerase II family signature 608 624 4.4E-64 T 19-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS03750 88e421dc22f8dabed1ec3a9db03adf84 679 PRINTS PR00418 DNA topoisomerase II family signature 312 325 4.4E-64 T 19-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS03750 88e421dc22f8dabed1ec3a9db03adf84 679 PRINTS PR00418 DNA topoisomerase II family signature 63 78 4.4E-64 T 19-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS03750 88e421dc22f8dabed1ec3a9db03adf84 679 PRINTS PR00418 DNA topoisomerase II family signature 461 475 4.4E-64 T 19-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS03750 88e421dc22f8dabed1ec3a9db03adf84 679 PRINTS PR00418 DNA topoisomerase II family signature 98 111 4.4E-64 T 19-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS03750 88e421dc22f8dabed1ec3a9db03adf84 679 PRINTS PR00418 DNA topoisomerase II family signature 565 577 4.4E-64 T 19-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS03750 88e421dc22f8dabed1ec3a9db03adf84 679 SUPERFAMILY SSF55874 34 236 1.2E-59 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS02840 63cdbc22848a4f7fa7f7364b1c0a0f95 223 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 71 4.3E-13 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APA12_RS02840 63cdbc22848a4f7fa7f7364b1c0a0f95 223 PANTHER PTHR30328:SF16 2 217 6.7E-53 T 19-04-2016 APA12_RS02840 63cdbc22848a4f7fa7f7364b1c0a0f95 223 SUPERFAMILY SSF46689 14 93 8.72E-18 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS02840 63cdbc22848a4f7fa7f7364b1c0a0f95 223 Gene3D G3DSA:1.10.357.10 80 215 3.2E-30 T 19-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APA12_RS02840 63cdbc22848a4f7fa7f7364b1c0a0f95 223 PANTHER PTHR30328 2 217 6.7E-53 T 19-04-2016 APA12_RS02840 63cdbc22848a4f7fa7f7364b1c0a0f95 223 Gene3D G3DSA:1.10.10.60 59 79 3.6E-5 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS02840 63cdbc22848a4f7fa7f7364b1c0a0f95 223 SUPERFAMILY SSF48498 93 219 1.67E-34 T 19-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APA12_RS02840 63cdbc22848a4f7fa7f7364b1c0a0f95 223 Gene3D G3DSA:1.10.10.60 13 58 5.4E-17 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS02840 63cdbc22848a4f7fa7f7364b1c0a0f95 223 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 40 5.2E-7 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APA12_RS02840 63cdbc22848a4f7fa7f7364b1c0a0f95 223 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 71 5.2E-7 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APA12_RS07430 f88620611b2faa3bc51141ae0d6ea6bc 400 PANTHER PTHR21060:SF11 1 393 2.1E-129 T 19-04-2016 APA12_RS07430 f88620611b2faa3bc51141ae0d6ea6bc 400 PIRSF PIRSF000722 1 400 2.6E-128 T 19-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APA12_RS07430 f88620611b2faa3bc51141ae0d6ea6bc 400 PRINTS PR00471 Acetate kinase family signature 303 316 4.7E-36 T 19-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APA12_RS07430 f88620611b2faa3bc51141ae0d6ea6bc 400 PRINTS PR00471 Acetate kinase family signature 325 341 4.7E-36 T 19-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APA12_RS07430 f88620611b2faa3bc51141ae0d6ea6bc 400 PRINTS PR00471 Acetate kinase family signature 172 185 4.7E-36 T 19-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APA12_RS07430 f88620611b2faa3bc51141ae0d6ea6bc 400 PRINTS PR00471 Acetate kinase family signature 5 16 4.7E-36 T 19-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APA12_RS07430 f88620611b2faa3bc51141ae0d6ea6bc 400 PRINTS PR00471 Acetate kinase family signature 377 389 4.7E-36 T 19-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APA12_RS07430 f88620611b2faa3bc51141ae0d6ea6bc 400 PRINTS PR00471 Acetate kinase family signature 201 222 4.7E-36 T 19-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APA12_RS07430 f88620611b2faa3bc51141ae0d6ea6bc 400 TIGRFAM TIGR00016 ackA: acetate kinase 3 391 2.5E-101 T 19-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APA12_RS07430 f88620611b2faa3bc51141ae0d6ea6bc 400 Pfam PF00871 Acetokinase family 5 388 2.4E-101 T 19-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APA12_RS07430 f88620611b2faa3bc51141ae0d6ea6bc 400 Gene3D G3DSA:3.30.420.40 88 203 2.0E-6 T 19-04-2016 APA12_RS07430 f88620611b2faa3bc51141ae0d6ea6bc 400 SUPERFAMILY SSF53067 4 192 1.12E-48 T 19-04-2016 APA12_RS07430 f88620611b2faa3bc51141ae0d6ea6bc 400 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 201 218 - T 19-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APA12_RS07430 f88620611b2faa3bc51141ae0d6ea6bc 400 SUPERFAMILY SSF53067 157 396 2.41E-72 T 19-04-2016 APA12_RS07430 f88620611b2faa3bc51141ae0d6ea6bc 400 PANTHER PTHR21060 1 393 2.1E-129 T 19-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APA12_RS07430 f88620611b2faa3bc51141ae0d6ea6bc 400 Hamap MF_00020 Acetate kinase [ackA]. 1 399 135.361 T 19-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APA12_RS07430 f88620611b2faa3bc51141ae0d6ea6bc 400 Gene3D G3DSA:3.30.420.40 204 393 2.0E-66 T 19-04-2016 APA12_RS04870 426ec0ecf4af8f23a8d2e3012531dcca 1063 SUPERFAMILY SSF82714 184 266 3.4E-13 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APA12_RS04870 426ec0ecf4af8f23a8d2e3012531dcca 1063 Gene3D G3DSA:3.30.70.1430 40 141 1.0E-29 T 19-04-2016 APA12_RS04870 426ec0ecf4af8f23a8d2e3012531dcca 1063 PANTHER PTHR32063:SF21 1 785 0.0 T 19-04-2016 APA12_RS04870 426ec0ecf4af8f23a8d2e3012531dcca 1063 Gene3D G3DSA:3.30.70.1430 566 653 2.1E-8 T 19-04-2016 APA12_RS04870 426ec0ecf4af8f23a8d2e3012531dcca 1063 Gene3D G3DSA:1.20.1640.10 285 494 7.0E-55 T 19-04-2016 APA12_RS04870 426ec0ecf4af8f23a8d2e3012531dcca 1063 PANTHER PTHR32063:SF21 801 1050 0.0 T 19-04-2016 APA12_RS04870 426ec0ecf4af8f23a8d2e3012531dcca 1063 PANTHER PTHR32063 801 1050 0.0 T 19-04-2016 APA12_RS04870 426ec0ecf4af8f23a8d2e3012531dcca 1063 Gene3D G3DSA:3.30.2090.10 183 266 9.2E-13 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APA12_RS04870 426ec0ecf4af8f23a8d2e3012531dcca 1063 Gene3D G3DSA:3.30.2090.10 716 812 4.7E-12 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APA12_RS04870 426ec0ecf4af8f23a8d2e3012531dcca 1063 Gene3D G3DSA:1.10.3850.10 820 1034 4.1E-50 T 19-04-2016 APA12_RS04870 426ec0ecf4af8f23a8d2e3012531dcca 1063 Pfam PF00873 AcrB/AcrD/AcrF family 4 1034 0.0 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS04870 426ec0ecf4af8f23a8d2e3012531dcca 1063 SUPERFAMILY SSF82693 562 659 1.36E-13 T 19-04-2016 APA12_RS04870 426ec0ecf4af8f23a8d2e3012531dcca 1063 PANTHER PTHR32063 1 785 0.0 T 19-04-2016 APA12_RS04870 426ec0ecf4af8f23a8d2e3012531dcca 1063 SUPERFAMILY SSF82693 40 130 4.97E-23 T 19-04-2016 APA12_RS04870 426ec0ecf4af8f23a8d2e3012531dcca 1063 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 6.5E-71 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS04870 426ec0ecf4af8f23a8d2e3012531dcca 1063 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 6.5E-71 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS04870 426ec0ecf4af8f23a8d2e3012531dcca 1063 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 6.5E-71 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS04870 426ec0ecf4af8f23a8d2e3012531dcca 1063 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 6.5E-71 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS04870 426ec0ecf4af8f23a8d2e3012531dcca 1063 PRINTS PR00702 Acriflavin resistance protein family signature 549 566 6.5E-71 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS04870 426ec0ecf4af8f23a8d2e3012531dcca 1063 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 6.5E-71 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS04870 426ec0ecf4af8f23a8d2e3012531dcca 1063 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 6.5E-71 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS04870 426ec0ecf4af8f23a8d2e3012531dcca 1063 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 6.5E-71 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS04870 426ec0ecf4af8f23a8d2e3012531dcca 1063 PRINTS PR00702 Acriflavin resistance protein family signature 616 630 6.5E-71 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS04870 426ec0ecf4af8f23a8d2e3012531dcca 1063 SUPERFAMILY SSF82693 136 182 8.89E-22 T 19-04-2016 APA12_RS04870 426ec0ecf4af8f23a8d2e3012531dcca 1063 SUPERFAMILY SSF82693 268 324 8.89E-22 T 19-04-2016 APA12_RS04870 426ec0ecf4af8f23a8d2e3012531dcca 1063 SUPERFAMILY SSF82714 716 784 3.14E-10 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APA12_RS04870 426ec0ecf4af8f23a8d2e3012531dcca 1063 SUPERFAMILY SSF82866 290 489 6.8E-45 T 19-04-2016 APA12_RS04870 426ec0ecf4af8f23a8d2e3012531dcca 1063 SUPERFAMILY SSF82866 815 1035 3.66E-42 T 19-04-2016 APA12_RS01070 077e495493fb5c89ead3809d19369f90 559 SUPERFAMILY SSF52540 10 247 1.74E-52 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS01070 077e495493fb5c89ead3809d19369f90 559 Pfam PF12848 ABC transporter 234 302 2.7E-12 T 19-04-2016 IPR032781 ABC-transporter extension domain APA12_RS01070 077e495493fb5c89ead3809d19369f90 559 SUPERFAMILY SSF52540 312 526 5.82E-47 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS01070 077e495493fb5c89ead3809d19369f90 559 Pfam PF00005 ABC transporter 25 195 8.7E-28 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS01070 077e495493fb5c89ead3809d19369f90 559 Pfam PF00005 ABC transporter 344 477 7.8E-25 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS01070 077e495493fb5c89ead3809d19369f90 559 Gene3D G3DSA:3.40.50.300 326 536 4.5E-45 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS01070 077e495493fb5c89ead3809d19369f90 559 PANTHER PTHR19211 5 559 0.0 T 19-04-2016 APA12_RS01070 077e495493fb5c89ead3809d19369f90 559 SMART SM00382 33 244 2.8E-9 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS01070 077e495493fb5c89ead3809d19369f90 559 SMART SM00382 352 528 6.2E-11 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS01070 077e495493fb5c89ead3809d19369f90 559 ProSitePatterns PS00211 ABC transporters family signature. 167 181 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APA12_RS01070 077e495493fb5c89ead3809d19369f90 559 PANTHER PTHR19211:SF7 5 559 0.0 T 19-04-2016 APA12_RS01070 077e495493fb5c89ead3809d19369f90 559 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 5 557 9.2E-294 T 19-04-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD APA12_RS01070 077e495493fb5c89ead3809d19369f90 559 Gene3D G3DSA:3.40.50.300 10 108 6.4E-56 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS01070 077e495493fb5c89ead3809d19369f90 559 Gene3D G3DSA:3.40.50.300 145 292 6.4E-56 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05815 e60d3aeb34e774740d68f901fd236f39 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 225 245 2.7E-11 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS05815 e60d3aeb34e774740d68f901fd236f39 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 159 2.7E-11 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS05815 e60d3aeb34e774740d68f901fd236f39 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 190 207 2.7E-11 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS05815 e60d3aeb34e774740d68f901fd236f39 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 94 105 2.7E-11 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS05815 e60d3aeb34e774740d68f901fd236f39 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 188 2.7E-11 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS05815 e60d3aeb34e774740d68f901fd236f39 279 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 24 262 2.0E-88 T 19-04-2016 APA12_RS05815 e60d3aeb34e774740d68f901fd236f39 279 PANTHER PTHR24322:SF317 169 201 2.4E-60 T 19-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 APA12_RS05815 e60d3aeb34e774740d68f901fd236f39 279 PANTHER PTHR24322:SF317 22 153 2.4E-60 T 19-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 APA12_RS05815 e60d3aeb34e774740d68f901fd236f39 279 PANTHER PTHR24322 169 201 2.4E-60 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS05815 e60d3aeb34e774740d68f901fd236f39 279 PANTHER PTHR24322 22 153 2.4E-60 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS05815 e60d3aeb34e774740d68f901fd236f39 279 SUPERFAMILY SSF51735 16 266 5.61E-66 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS05815 e60d3aeb34e774740d68f901fd236f39 279 PIRSF PIRSF000094 12 270 1.2E-111 T 19-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 APA12_RS05815 e60d3aeb34e774740d68f901fd236f39 279 Gene3D G3DSA:3.40.50.720 17 211 7.7E-68 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS11190 aaec7128836362dcdd0ac18ca354ba1c 421 PANTHER PTHR21266 20 368 4.0E-55 T 19-04-2016 APA12_RS11190 aaec7128836362dcdd0ac18ca354ba1c 421 SUPERFAMILY SSF50022 12 151 3.67E-49 T 19-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APA12_RS11190 aaec7128836362dcdd0ac18ca354ba1c 421 PANTHER PTHR21266:SF30 20 368 4.0E-55 T 19-04-2016 APA12_RS11190 aaec7128836362dcdd0ac18ca354ba1c 421 Gene3D G3DSA:3.90.380.10 141 419 5.2E-71 T 19-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 APA12_RS11190 aaec7128836362dcdd0ac18ca354ba1c 421 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 158 415 6.5E-15 T 19-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 APA12_RS11190 aaec7128836362dcdd0ac18ca354ba1c 421 Pfam PF00355 Rieske [2Fe-2S] domain 38 121 2.3E-19 T 19-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APA12_RS11190 aaec7128836362dcdd0ac18ca354ba1c 421 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 178 200 2.747798E-40 T 19-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 APA12_RS11190 aaec7128836362dcdd0ac18ca354ba1c 421 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 137 163 2.747798E-40 T 19-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 APA12_RS11190 aaec7128836362dcdd0ac18ca354ba1c 421 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 53 68 2.747798E-40 T 19-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 APA12_RS11190 aaec7128836362dcdd0ac18ca354ba1c 421 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 23 48 2.747798E-40 T 19-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 APA12_RS11190 aaec7128836362dcdd0ac18ca354ba1c 421 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 95 115 2.747798E-40 T 19-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 APA12_RS11190 aaec7128836362dcdd0ac18ca354ba1c 421 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 74 94 2.747798E-40 T 19-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 APA12_RS11190 aaec7128836362dcdd0ac18ca354ba1c 421 Gene3D G3DSA:2.102.10.10 38 140 6.6E-24 T 19-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APA12_RS11190 aaec7128836362dcdd0ac18ca354ba1c 421 SUPERFAMILY SSF55961 156 419 2.35E-47 T 19-04-2016 APA12_RS08450 9ef216aad0c4b845964e9111b10738ee 695 SUPERFAMILY SSF54980 405 483 2.3E-22 T 19-04-2016 IPR009022 Elongation factor G, III-V domain APA12_RS08450 9ef216aad0c4b845964e9111b10738ee 695 SUPERFAMILY SSF52540 6 280 1.58E-103 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS08450 9ef216aad0c4b845964e9111b10738ee 695 SMART SM00838 603 690 6.1E-52 T 19-04-2016 IPR000640 Translation elongation factor EFG, V domain APA12_RS08450 9ef216aad0c4b845964e9111b10738ee 695 Pfam PF03764 Elongation factor G, domain IV 482 600 4.4E-44 T 19-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 APA12_RS08450 9ef216aad0c4b845964e9111b10738ee 695 Pfam PF00009 Elongation factor Tu GTP binding domain 9 280 7.5E-65 T 19-04-2016 APA12_RS08450 9ef216aad0c4b845964e9111b10738ee 695 SMART SM00889 483 601 2.7E-66 T 19-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 APA12_RS08450 9ef216aad0c4b845964e9111b10738ee 695 PANTHER PTHR23115 307 694 0.0 T 19-04-2016 APA12_RS08450 9ef216aad0c4b845964e9111b10738ee 695 PANTHER PTHR23115 254 282 0.0 T 19-04-2016 APA12_RS08450 9ef216aad0c4b845964e9111b10738ee 695 Gene3D G3DSA:3.30.70.870 408 483 5.6E-33 T 19-04-2016 APA12_RS08450 9ef216aad0c4b845964e9111b10738ee 695 SUPERFAMILY SSF50447 264 407 5.3E-35 T 19-04-2016 IPR009000 Translation protein, beta-barrel domain APA12_RS08450 9ef216aad0c4b845964e9111b10738ee 695 Gene3D G3DSA:3.30.230.10 487 600 2.7E-47 T 19-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APA12_RS08450 9ef216aad0c4b845964e9111b10738ee 695 Hamap MF_00054_B Elongation factor G [fusA]. 6 694 106.421 T 19-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 APA12_RS08450 9ef216aad0c4b845964e9111b10738ee 695 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 19-04-2016 IPR031157 Tr-type G domain, conserved site APA12_RS08450 9ef216aad0c4b845964e9111b10738ee 695 SUPERFAMILY SSF54211 482 602 2.02E-42 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APA12_RS08450 9ef216aad0c4b845964e9111b10738ee 695 Pfam PF03144 Elongation factor Tu domain 2 327 394 4.3E-19 T 19-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APA12_RS08450 9ef216aad0c4b845964e9111b10738ee 695 PANTHER PTHR23115 5 177 0.0 T 19-04-2016 APA12_RS08450 9ef216aad0c4b845964e9111b10738ee 695 SUPERFAMILY SSF54980 606 692 8.99E-31 T 19-04-2016 IPR009022 Elongation factor G, III-V domain APA12_RS08450 9ef216aad0c4b845964e9111b10738ee 695 Gene3D G3DSA:3.30.70.240 601 692 1.2E-34 T 19-04-2016 IPR000640 Translation elongation factor EFG, V domain APA12_RS08450 9ef216aad0c4b845964e9111b10738ee 695 Gene3D G3DSA:2.40.30.10 309 407 1.6E-35 T 19-04-2016 APA12_RS08450 9ef216aad0c4b845964e9111b10738ee 695 PANTHER PTHR23115:SF66 307 694 0.0 T 19-04-2016 APA12_RS08450 9ef216aad0c4b845964e9111b10738ee 695 PANTHER PTHR23115:SF66 5 177 0.0 T 19-04-2016 APA12_RS08450 9ef216aad0c4b845964e9111b10738ee 695 Pfam PF14492 Elongation Factor G, domain II 407 480 6.4E-31 T 19-04-2016 IPR009022 Elongation factor G, III-V domain APA12_RS08450 9ef216aad0c4b845964e9111b10738ee 695 Gene3D G3DSA:3.40.50.300 5 286 1.4E-99 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS08450 9ef216aad0c4b845964e9111b10738ee 695 PANTHER PTHR23115:SF66 254 282 0.0 T 19-04-2016 APA12_RS08450 9ef216aad0c4b845964e9111b10738ee 695 TIGRFAM TIGR00484 EF-G: translation elongation factor G 3 694 0.0 T 19-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 APA12_RS08450 9ef216aad0c4b845964e9111b10738ee 695 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 179 4.8E-28 T 19-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APA12_RS08450 9ef216aad0c4b845964e9111b10738ee 695 Pfam PF00679 Elongation factor G C-terminus 603 689 2.8E-31 T 19-04-2016 IPR000640 Translation elongation factor EFG, V domain APA12_RS08450 9ef216aad0c4b845964e9111b10738ee 695 PRINTS PR00315 GTP-binding elongation factor signature 130 139 2.4E-16 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APA12_RS08450 9ef216aad0c4b845964e9111b10738ee 695 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.4E-16 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APA12_RS08450 9ef216aad0c4b845964e9111b10738ee 695 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.4E-16 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APA12_RS08450 9ef216aad0c4b845964e9111b10738ee 695 PRINTS PR00315 GTP-binding elongation factor signature 12 25 2.4E-16 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APA12_RS08450 9ef216aad0c4b845964e9111b10738ee 695 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.4E-16 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APA12_RS12585 6ca13c133b7031074f2533a4e909d45e 291 PANTHER PTHR30425:SF0 9 284 2.6E-104 T 19-04-2016 APA12_RS12585 6ca13c133b7031074f2533a4e909d45e 291 Gene3D G3DSA:1.10.3720.10 26 285 9.3E-34 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS12585 6ca13c133b7031074f2533a4e909d45e 291 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 25 284 1.2E-82 T 19-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 APA12_RS12585 6ca13c133b7031074f2533a4e909d45e 291 PANTHER PTHR30425 9 284 2.6E-104 T 19-04-2016 APA12_RS12585 6ca13c133b7031074f2533a4e909d45e 291 SUPERFAMILY SSF161098 32 282 4.14E-33 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS12585 6ca13c133b7031074f2533a4e909d45e 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 284 5.8E-21 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS06205 2ec6908752c9fa6fb28696b80f2c2698 812 Pfam PF00204 DNA gyrase B 234 403 8.2E-51 T 19-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS06205 2ec6908752c9fa6fb28696b80f2c2698 812 SMART SM00387 42 187 1.6E-27 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS06205 2ec6908752c9fa6fb28696b80f2c2698 812 Gene3D G3DSA:3.30.230.10 233 405 3.9E-62 T 19-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APA12_RS06205 2ec6908752c9fa6fb28696b80f2c2698 812 SUPERFAMILY SSF54211 234 404 1.18E-49 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APA12_RS06205 2ec6908752c9fa6fb28696b80f2c2698 812 PRINTS PR01159 DNA gyrase subunit B signature 207 220 1.7E-71 T 19-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS06205 2ec6908752c9fa6fb28696b80f2c2698 812 PRINTS PR01159 DNA gyrase subunit B signature 257 275 1.7E-71 T 19-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS06205 2ec6908752c9fa6fb28696b80f2c2698 812 PRINTS PR01159 DNA gyrase subunit B signature 781 797 1.7E-71 T 19-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS06205 2ec6908752c9fa6fb28696b80f2c2698 812 PRINTS PR01159 DNA gyrase subunit B signature 325 341 1.7E-71 T 19-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS06205 2ec6908752c9fa6fb28696b80f2c2698 812 PRINTS PR01159 DNA gyrase subunit B signature 373 387 1.7E-71 T 19-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS06205 2ec6908752c9fa6fb28696b80f2c2698 812 PRINTS PR01159 DNA gyrase subunit B signature 16 26 1.7E-71 T 19-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS06205 2ec6908752c9fa6fb28696b80f2c2698 812 PRINTS PR01159 DNA gyrase subunit B signature 387 407 1.7E-71 T 19-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS06205 2ec6908752c9fa6fb28696b80f2c2698 812 PRINTS PR01159 DNA gyrase subunit B signature 233 255 1.7E-71 T 19-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS06205 2ec6908752c9fa6fb28696b80f2c2698 812 PRINTS PR01159 DNA gyrase subunit B signature 483 492 1.7E-71 T 19-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS06205 2ec6908752c9fa6fb28696b80f2c2698 812 PRINTS PR01159 DNA gyrase subunit B signature 765 777 1.7E-71 T 19-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS06205 2ec6908752c9fa6fb28696b80f2c2698 812 PRINTS PR01159 DNA gyrase subunit B signature 192 207 1.7E-71 T 19-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS06205 2ec6908752c9fa6fb28696b80f2c2698 812 PRINTS PR00418 DNA topoisomerase II family signature 283 296 4.5E-67 T 19-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS06205 2ec6908752c9fa6fb28696b80f2c2698 812 PRINTS PR00418 DNA topoisomerase II family signature 433 447 4.5E-67 T 19-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS06205 2ec6908752c9fa6fb28696b80f2c2698 812 PRINTS PR00418 DNA topoisomerase II family signature 543 555 4.5E-67 T 19-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS06205 2ec6908752c9fa6fb28696b80f2c2698 812 PRINTS PR00418 DNA topoisomerase II family signature 81 94 4.5E-67 T 19-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS06205 2ec6908752c9fa6fb28696b80f2c2698 812 PRINTS PR00418 DNA topoisomerase II family signature 744 760 4.5E-67 T 19-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS06205 2ec6908752c9fa6fb28696b80f2c2698 812 PRINTS PR00418 DNA topoisomerase II family signature 505 521 4.5E-67 T 19-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS06205 2ec6908752c9fa6fb28696b80f2c2698 812 PRINTS PR00418 DNA topoisomerase II family signature 46 61 4.5E-67 T 19-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS06205 2ec6908752c9fa6fb28696b80f2c2698 812 PRINTS PR00418 DNA topoisomerase II family signature 124 138 4.5E-67 T 19-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS06205 2ec6908752c9fa6fb28696b80f2c2698 812 PRINTS PR00418 DNA topoisomerase II family signature 523 540 4.5E-67 T 19-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS06205 2ec6908752c9fa6fb28696b80f2c2698 812 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 741 800 6.1E-25 T 19-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS06205 2ec6908752c9fa6fb28696b80f2c2698 812 PANTHER PTHR10169 13 571 1.0E-268 T 19-04-2016 APA12_RS06205 2ec6908752c9fa6fb28696b80f2c2698 812 PANTHER PTHR10169 729 812 1.0E-268 T 19-04-2016 APA12_RS06205 2ec6908752c9fa6fb28696b80f2c2698 812 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 43 185 1.9E-23 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS06205 2ec6908752c9fa6fb28696b80f2c2698 812 Gene3D G3DSA:3.30.565.10 26 222 9.1E-85 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS06205 2ec6908752c9fa6fb28696b80f2c2698 812 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 16 812 8.4E-280 T 19-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APA12_RS06205 2ec6908752c9fa6fb28696b80f2c2698 812 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 13 812 93.746 T 19-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APA12_RS06205 2ec6908752c9fa6fb28696b80f2c2698 812 Gene3D G3DSA:3.40.50.670 729 794 1.3E-88 T 19-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS06205 2ec6908752c9fa6fb28696b80f2c2698 812 Gene3D G3DSA:3.40.50.670 417 568 1.3E-88 T 19-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS06205 2ec6908752c9fa6fb28696b80f2c2698 812 Pfam PF01751 Toprim domain 432 548 6.1E-17 T 19-04-2016 IPR006171 Toprim domain APA12_RS06205 2ec6908752c9fa6fb28696b80f2c2698 812 ProSitePatterns PS00177 DNA topoisomerase II signature. 435 443 - T 19-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS06205 2ec6908752c9fa6fb28696b80f2c2698 812 SMART SM00433 46 609 1.2E-244 T 19-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS06205 2ec6908752c9fa6fb28696b80f2c2698 812 SUPERFAMILY SSF56719 738 803 8.63E-80 T 19-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 APA12_RS06205 2ec6908752c9fa6fb28696b80f2c2698 812 SUPERFAMILY SSF56719 407 578 8.63E-80 T 19-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 APA12_RS06205 2ec6908752c9fa6fb28696b80f2c2698 812 SUPERFAMILY SSF55874 16 223 7.07E-67 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS05515 c3503f35cec9031e2a7ac31b0e5fea1c 465 Pfam PF13500 AAA domain 258 445 3.3E-51 T 19-04-2016 APA12_RS05515 c3503f35cec9031e2a7ac31b0e5fea1c 465 Gene3D G3DSA:3.40.50.150 16 164 1.2E-32 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS05515 c3503f35cec9031e2a7ac31b0e5fea1c 465 PANTHER PTHR21343 238 459 2.3E-48 T 19-04-2016 APA12_RS05515 c3503f35cec9031e2a7ac31b0e5fea1c 465 Pfam PF13489 Methyltransferase domain 32 166 3.8E-18 T 19-04-2016 APA12_RS05515 c3503f35cec9031e2a7ac31b0e5fea1c 465 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 256 443 25.498 T 19-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 APA12_RS05515 c3503f35cec9031e2a7ac31b0e5fea1c 465 Gene3D G3DSA:3.40.50.300 257 448 1.3E-56 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05515 c3503f35cec9031e2a7ac31b0e5fea1c 465 SUPERFAMILY SSF53335 20 166 2.3E-31 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS05515 c3503f35cec9031e2a7ac31b0e5fea1c 465 PANTHER PTHR21343:SF0 238 459 2.3E-48 T 19-04-2016 APA12_RS05515 c3503f35cec9031e2a7ac31b0e5fea1c 465 SUPERFAMILY SSF52540 258 452 2.12E-36 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05515 c3503f35cec9031e2a7ac31b0e5fea1c 465 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 260 415 6.3E-38 T 19-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 APA12_RS01090 02e7b446e925b2d225129655590de3a5 275 SUPERFAMILY SSF46565 168 272 1.31E-13 T 19-04-2016 IPR001623 DnaJ domain APA12_RS01090 02e7b446e925b2d225129655590de3a5 275 SUPERFAMILY SSF158682 71 224 1.57E-11 T 19-04-2016 IPR029024 TerB-like APA12_RS01090 02e7b446e925b2d225129655590de3a5 275 SUPERFAMILY SSF158682 5 21 1.57E-11 T 19-04-2016 IPR029024 TerB-like APA12_RS01090 02e7b446e925b2d225129655590de3a5 275 Gene3D G3DSA:1.10.287.110 214 271 5.1E-11 T 19-04-2016 IPR001623 DnaJ domain APA12_RS01090 02e7b446e925b2d225129655590de3a5 275 SMART SM00271 209 274 1.7E-8 T 19-04-2016 IPR001623 DnaJ domain APA12_RS01090 02e7b446e925b2d225129655590de3a5 275 Pfam PF00226 DnaJ domain 210 271 1.7E-7 T 19-04-2016 IPR001623 DnaJ domain APA12_RS01090 02e7b446e925b2d225129655590de3a5 275 Pfam PF05099 Tellurite resistance protein TerB 77 198 3.3E-25 T 19-04-2016 IPR007791 Co-chaperone DjlA, N-terminal APA12_RS01090 02e7b446e925b2d225129655590de3a5 275 Gene3D G3DSA:1.10.3680.10 78 213 6.1E-9 T 19-04-2016 IPR029024 TerB-like APA12_RS04025 56aa2f7b0ab5db7e35604cd4160acddc 165 PANTHER PTHR36918 1 151 3.2E-30 T 19-04-2016 APA12_RS04025 56aa2f7b0ab5db7e35604cd4160acddc 165 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 137 155 3.7E-6 T 19-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APA12_RS04025 56aa2f7b0ab5db7e35604cd4160acddc 165 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 16 33 3.7E-6 T 19-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APA12_RS04025 56aa2f7b0ab5db7e35604cd4160acddc 165 Hamap MF_00821 Protein-export protein SecB [secB]. 1 159 28.575 T 19-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APA12_RS04025 56aa2f7b0ab5db7e35604cd4160acddc 165 Pfam PF02556 Preprotein translocase subunit SecB 13 156 2.5E-47 T 19-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APA12_RS04025 56aa2f7b0ab5db7e35604cd4160acddc 165 PANTHER PTHR36918:SF1 1 151 3.2E-30 T 19-04-2016 APA12_RS04025 56aa2f7b0ab5db7e35604cd4160acddc 165 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 14 155 1.2E-32 T 19-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APA12_RS04025 56aa2f7b0ab5db7e35604cd4160acddc 165 Gene3D G3DSA:3.10.420.10 6 161 1.7E-49 T 19-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APA12_RS04025 56aa2f7b0ab5db7e35604cd4160acddc 165 SUPERFAMILY SSF54611 5 154 1.81E-38 T 19-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APA12_RS04790 f0768ebee496b7600fc874d76c85327b 191 PANTHER PTHR13718 20 176 1.1E-65 T 19-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 APA12_RS04790 f0768ebee496b7600fc874d76c85327b 191 Pfam PF03719 Ribosomal protein S5, C-terminal domain 99 169 4.2E-29 T 19-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 APA12_RS04790 f0768ebee496b7600fc874d76c85327b 191 ProSitePatterns PS00585 Ribosomal protein S5 signature. 39 71 - T 19-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site APA12_RS04790 f0768ebee496b7600fc874d76c85327b 191 SUPERFAMILY SSF54768 19 87 9.0E-23 T 19-04-2016 APA12_RS04790 f0768ebee496b7600fc874d76c85327b 191 Gene3D G3DSA:3.30.160.20 20 83 2.3E-29 T 19-04-2016 IPR014720 Double-stranded RNA-binding domain APA12_RS04790 f0768ebee496b7600fc874d76c85327b 191 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 21 174 2.9E-64 T 19-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 APA12_RS04790 f0768ebee496b7600fc874d76c85327b 191 SUPERFAMILY SSF54211 91 171 6.07E-25 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APA12_RS04790 f0768ebee496b7600fc874d76c85327b 191 Gene3D G3DSA:3.30.230.10 87 171 2.3E-32 T 19-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APA12_RS04790 f0768ebee496b7600fc874d76c85327b 191 Pfam PF00333 Ribosomal protein S5, N-terminal domain 22 86 5.3E-28 T 19-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 APA12_RS04790 f0768ebee496b7600fc874d76c85327b 191 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 175 35.718 T 19-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 APA12_RS02745 f05baf9631fdc11252fbc9bd36ac8fd0 420 Pfam PF00999 Sodium/hydrogen exchanger family 13 411 2.1E-47 T 19-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 APA12_RS02745 f05baf9631fdc11252fbc9bd36ac8fd0 420 PANTHER PTHR10110 10 411 1.3E-71 T 19-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 APA12_RS02745 f05baf9631fdc11252fbc9bd36ac8fd0 420 PANTHER PTHR10110:SF86 10 411 1.3E-71 T 19-04-2016 APA12_RS01515 c2e19e25e679de31815d3f026f3acead 294 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 13 294 56.124 T 19-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APA12_RS01515 c2e19e25e679de31815d3f026f3acead 294 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 15 290 1.9E-140 T 19-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APA12_RS01515 c2e19e25e679de31815d3f026f3acead 294 Gene3D G3DSA:3.30.930.10 9 216 7.7E-98 T 19-04-2016 APA12_RS01515 c2e19e25e679de31815d3f026f3acead 294 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 88 108 4.8E-59 T 19-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APA12_RS01515 c2e19e25e679de31815d3f026f3acead 294 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 254 270 4.8E-59 T 19-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APA12_RS01515 c2e19e25e679de31815d3f026f3acead 294 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 145 165 4.8E-59 T 19-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APA12_RS01515 c2e19e25e679de31815d3f026f3acead 294 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 168 183 4.8E-59 T 19-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APA12_RS01515 c2e19e25e679de31815d3f026f3acead 294 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 119 143 4.8E-59 T 19-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APA12_RS01515 c2e19e25e679de31815d3f026f3acead 294 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 67 82 4.8E-59 T 19-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APA12_RS01515 c2e19e25e679de31815d3f026f3acead 294 SUPERFAMILY SSF55681 14 290 1.66E-128 T 19-04-2016 APA12_RS01515 c2e19e25e679de31815d3f026f3acead 294 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 14 292 9.1E-134 T 19-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APA12_RS01515 c2e19e25e679de31815d3f026f3acead 294 Gene3D G3DSA:1.20.58.180 218 292 2.4E-32 T 19-04-2016 APA12_RS01515 c2e19e25e679de31815d3f026f3acead 294 PANTHER PTHR30075 1 290 3.1E-193 T 19-04-2016 APA12_RS01570 19d63b5b6c12759444a9f5d31f2e48a3 414 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 72 397 1.2E-51 T 19-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APA12_RS01570 19d63b5b6c12759444a9f5d31f2e48a3 414 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 20 410 52.968 T 19-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APA12_RS01570 19d63b5b6c12759444a9f5d31f2e48a3 414 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 100 114 - T 19-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APA12_RS01570 19d63b5b6c12759444a9f5d31f2e48a3 414 PIRSF PIRSF001413 14 414 3.7E-164 T 19-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APA12_RS01570 19d63b5b6c12759444a9f5d31f2e48a3 414 SUPERFAMILY SSF53686 23 409 3.27E-148 T 19-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APA12_RS01570 19d63b5b6c12759444a9f5d31f2e48a3 414 Gene3D G3DSA:3.40.50.1100 197 413 5.3E-97 T 19-04-2016 APA12_RS01570 19d63b5b6c12759444a9f5d31f2e48a3 414 PANTHER PTHR10314:SF3 26 410 1.0E-231 T 19-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APA12_RS01570 19d63b5b6c12759444a9f5d31f2e48a3 414 Gene3D G3DSA:3.40.50.1100 118 196 2.5E-23 T 19-04-2016 APA12_RS01570 19d63b5b6c12759444a9f5d31f2e48a3 414 PANTHER PTHR10314 26 410 1.0E-231 T 19-04-2016 APA12_RS01570 19d63b5b6c12759444a9f5d31f2e48a3 414 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 26 409 4.7E-194 T 19-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APA12_RS00745 d294b4409f972ac53ee21ea57e16db37 416 SUPERFAMILY SSF53098 71 404 3.19E-28 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS00745 d294b4409f972ac53ee21ea57e16db37 416 Pfam PF13546 DDE superfamily endonuclease 73 237 6.6E-44 T 19-04-2016 APA12_RS00745 d294b4409f972ac53ee21ea57e16db37 416 PANTHER PTHR33627 5 379 3.4E-52 T 19-04-2016 APA12_RS00745 d294b4409f972ac53ee21ea57e16db37 416 PANTHER PTHR33627:SF1 5 379 3.4E-52 T 19-04-2016 APA12_RS08180 d294b4409f972ac53ee21ea57e16db37 416 SUPERFAMILY SSF53098 71 404 3.19E-28 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS08180 d294b4409f972ac53ee21ea57e16db37 416 Pfam PF13546 DDE superfamily endonuclease 73 237 6.6E-44 T 19-04-2016 APA12_RS08180 d294b4409f972ac53ee21ea57e16db37 416 PANTHER PTHR33627 5 379 3.4E-52 T 19-04-2016 APA12_RS08180 d294b4409f972ac53ee21ea57e16db37 416 PANTHER PTHR33627:SF1 5 379 3.4E-52 T 19-04-2016 APA12_RS07100 d294b4409f972ac53ee21ea57e16db37 416 SUPERFAMILY SSF53098 71 404 3.19E-28 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS07100 d294b4409f972ac53ee21ea57e16db37 416 Pfam PF13546 DDE superfamily endonuclease 73 237 6.6E-44 T 19-04-2016 APA12_RS07100 d294b4409f972ac53ee21ea57e16db37 416 PANTHER PTHR33627 5 379 3.4E-52 T 19-04-2016 APA12_RS07100 d294b4409f972ac53ee21ea57e16db37 416 PANTHER PTHR33627:SF1 5 379 3.4E-52 T 19-04-2016 APA12_RS06925 d294b4409f972ac53ee21ea57e16db37 416 SUPERFAMILY SSF53098 71 404 3.19E-28 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS06925 d294b4409f972ac53ee21ea57e16db37 416 Pfam PF13546 DDE superfamily endonuclease 73 237 6.6E-44 T 19-04-2016 APA12_RS06925 d294b4409f972ac53ee21ea57e16db37 416 PANTHER PTHR33627 5 379 3.4E-52 T 19-04-2016 APA12_RS06925 d294b4409f972ac53ee21ea57e16db37 416 PANTHER PTHR33627:SF1 5 379 3.4E-52 T 19-04-2016 APA12_RS02230 d294b4409f972ac53ee21ea57e16db37 416 SUPERFAMILY SSF53098 71 404 3.19E-28 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS02230 d294b4409f972ac53ee21ea57e16db37 416 Pfam PF13546 DDE superfamily endonuclease 73 237 6.6E-44 T 19-04-2016 APA12_RS02230 d294b4409f972ac53ee21ea57e16db37 416 PANTHER PTHR33627 5 379 3.4E-52 T 19-04-2016 APA12_RS02230 d294b4409f972ac53ee21ea57e16db37 416 PANTHER PTHR33627:SF1 5 379 3.4E-52 T 19-04-2016 APA12_RS09180 d294b4409f972ac53ee21ea57e16db37 416 SUPERFAMILY SSF53098 71 404 3.19E-28 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS09180 d294b4409f972ac53ee21ea57e16db37 416 Pfam PF13546 DDE superfamily endonuclease 73 237 6.6E-44 T 19-04-2016 APA12_RS09180 d294b4409f972ac53ee21ea57e16db37 416 PANTHER PTHR33627 5 379 3.4E-52 T 19-04-2016 APA12_RS09180 d294b4409f972ac53ee21ea57e16db37 416 PANTHER PTHR33627:SF1 5 379 3.4E-52 T 19-04-2016 APA12_RS08730 83dbd3cc41cdc190b249bd9ec5c558d5 231 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 72 225 1.9E-27 T 19-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like APA12_RS08730 83dbd3cc41cdc190b249bd9ec5c558d5 231 PANTHER PTHR35869 51 224 7.1E-15 T 19-04-2016 APA12_RS08730 83dbd3cc41cdc190b249bd9ec5c558d5 231 Gene3D G3DSA:2.50.20.10 63 225 5.1E-26 T 19-04-2016 APA12_RS08730 83dbd3cc41cdc190b249bd9ec5c558d5 231 SUPERFAMILY SSF89392 63 225 7.45E-28 T 19-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX APA12_RS02795 76de1506d8df5183e8cb36ac9893d4f4 144 TIGRFAM TIGR00494 crcB: protein CrcB 7 125 5.3E-25 T 19-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 APA12_RS02795 76de1506d8df5183e8cb36ac9893d4f4 144 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 6 126 17.188 T 19-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 APA12_RS02795 76de1506d8df5183e8cb36ac9893d4f4 144 PANTHER PTHR28259 7 136 2.3E-31 T 19-04-2016 APA12_RS02795 76de1506d8df5183e8cb36ac9893d4f4 144 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 121 7.4E-21 T 19-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 APA12_RS00975 d53fe109761d62e278a065ee64107574 236 SUPERFAMILY SSF53167 10 169 3.53E-21 T 19-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APA12_RS00975 d53fe109761d62e278a065ee64107574 236 Gene3D G3DSA:3.40.50.1580 51 169 2.1E-15 T 19-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APA12_RS00975 d53fe109761d62e278a065ee64107574 236 Pfam PF01048 Phosphorylase superfamily 35 167 2.8E-10 T 19-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APA12_RS03435 f77e6809ce132df204d3082a80a62d69 257 SUPERFAMILY SSF52540 21 252 1.74E-62 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS03435 f77e6809ce132df204d3082a80a62d69 257 PANTHER PTHR24220 22 254 1.4E-133 T 19-04-2016 APA12_RS03435 f77e6809ce132df204d3082a80a62d69 257 Pfam PF00005 ABC transporter 36 181 2.1E-33 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS03435 f77e6809ce132df204d3082a80a62d69 257 PANTHER PTHR24220:SF497 22 254 1.4E-133 T 19-04-2016 APA12_RS03435 f77e6809ce132df204d3082a80a62d69 257 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 21 257 4.2E-111 T 19-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 APA12_RS03435 f77e6809ce132df204d3082a80a62d69 257 SMART SM00382 45 238 8.4E-9 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS03435 f77e6809ce132df204d3082a80a62d69 257 Gene3D G3DSA:3.40.50.300 21 250 2.1E-65 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS03435 f77e6809ce132df204d3082a80a62d69 257 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 230 252 9.6E-6 T 19-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal APA12_RS03435 f77e6809ce132df204d3082a80a62d69 257 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APA12_RS12130 c3a7137018377a1de7133b67fbd79c83 107 Pfam PF01527 Transposase 4 86 1.3E-9 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 APA12_RS12130 c3a7137018377a1de7133b67fbd79c83 107 Gene3D G3DSA:1.10.10.60 10 95 1.2E-15 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS12130 c3a7137018377a1de7133b67fbd79c83 107 PANTHER PTHR33215 1 106 8.8E-16 T 19-04-2016 APA12_RS12130 c3a7137018377a1de7133b67fbd79c83 107 SUPERFAMILY SSF46689 4 98 3.4E-17 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS12920 a637b1c24f22178968f606ac7db5feac 872 PRINTS PR00985 Leucyl-tRNA synthetase signature 193 206 6.0E-44 T 19-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APA12_RS12920 a637b1c24f22178968f606ac7db5feac 872 PRINTS PR00985 Leucyl-tRNA synthetase signature 504 522 6.0E-44 T 19-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APA12_RS12920 a637b1c24f22178968f606ac7db5feac 872 PRINTS PR00985 Leucyl-tRNA synthetase signature 135 152 6.0E-44 T 19-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APA12_RS12920 a637b1c24f22178968f606ac7db5feac 872 PRINTS PR00985 Leucyl-tRNA synthetase signature 223 242 6.0E-44 T 19-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APA12_RS12920 a637b1c24f22178968f606ac7db5feac 872 PRINTS PR00985 Leucyl-tRNA synthetase signature 575 585 6.0E-44 T 19-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APA12_RS12920 a637b1c24f22178968f606ac7db5feac 872 PRINTS PR00985 Leucyl-tRNA synthetase signature 542 564 6.0E-44 T 19-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APA12_RS12920 a637b1c24f22178968f606ac7db5feac 872 PRINTS PR00985 Leucyl-tRNA synthetase signature 161 177 6.0E-44 T 19-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APA12_RS12920 a637b1c24f22178968f606ac7db5feac 872 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 50 61 - T 19-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS12920 a637b1c24f22178968f606ac7db5feac 872 Gene3D G3DSA:1.10.730.10 657 806 2.1E-32 T 19-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS12920 a637b1c24f22178968f606ac7db5feac 872 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 627 667 1.1E-6 T 19-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS12920 a637b1c24f22178968f606ac7db5feac 872 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 19 179 2.6E-21 T 19-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS12920 a637b1c24f22178968f606ac7db5feac 872 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 434 605 1.7E-8 T 19-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS12920 a637b1c24f22178968f606ac7db5feac 872 SUPERFAMILY SSF52374 8 234 7.51E-142 T 19-04-2016 APA12_RS12920 a637b1c24f22178968f606ac7db5feac 872 SUPERFAMILY SSF52374 433 675 7.51E-142 T 19-04-2016 APA12_RS12920 a637b1c24f22178968f606ac7db5feac 872 SUPERFAMILY SSF50677 235 432 3.03E-47 T 19-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APA12_RS12920 a637b1c24f22178968f606ac7db5feac 872 SUPERFAMILY SSF47323 672 870 1.25E-22 T 19-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS12920 a637b1c24f22178968f606ac7db5feac 872 Gene3D G3DSA:3.40.50.620 441 591 2.7E-144 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS12920 a637b1c24f22178968f606ac7db5feac 872 Gene3D G3DSA:3.40.50.620 10 234 2.7E-144 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS12920 a637b1c24f22178968f606ac7db5feac 872 Gene3D G3DSA:3.40.50.620 627 656 2.7E-144 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS12920 a637b1c24f22178968f606ac7db5feac 872 Gene3D G3DSA:3.90.740.10 235 440 6.6E-40 T 19-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APA12_RS12920 a637b1c24f22178968f606ac7db5feac 872 PANTHER PTHR11946 255 592 0.0 T 19-04-2016 APA12_RS12920 a637b1c24f22178968f606ac7db5feac 872 PANTHER PTHR11946 627 869 0.0 T 19-04-2016 APA12_RS12920 a637b1c24f22178968f606ac7db5feac 872 PANTHER PTHR11946 1 214 0.0 T 19-04-2016 APA12_RS12920 a637b1c24f22178968f606ac7db5feac 872 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 230 420 4.6E-66 T 19-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 APA12_RS12920 a637b1c24f22178968f606ac7db5feac 872 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 10 870 21.637 T 19-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APA12_RS12920 a637b1c24f22178968f606ac7db5feac 872 Pfam PF08264 Anticodon-binding domain of tRNA 711 835 1.4E-13 T 19-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 APA12_RS12920 a637b1c24f22178968f606ac7db5feac 872 PANTHER PTHR11946:SF7 255 592 0.0 T 19-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APA12_RS12920 a637b1c24f22178968f606ac7db5feac 872 PANTHER PTHR11946:SF7 627 869 0.0 T 19-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APA12_RS12920 a637b1c24f22178968f606ac7db5feac 872 PANTHER PTHR11946:SF7 1 214 0.0 T 19-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APA12_RS12920 a637b1c24f22178968f606ac7db5feac 872 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 11 870 3.2E-291 T 19-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APA12_RS03900 8b1e36e7f7120aacbde04a42bba6aaae 241 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 172 241 6.3E-22 T 19-04-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 APA12_RS03900 8b1e36e7f7120aacbde04a42bba6aaae 241 PANTHER PTHR11935:SF7 3 241 4.8E-88 T 19-04-2016 APA12_RS03900 8b1e36e7f7120aacbde04a42bba6aaae 241 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 3 241 43.235 T 19-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 APA12_RS03900 8b1e36e7f7120aacbde04a42bba6aaae 241 PANTHER PTHR11935 3 241 4.8E-88 T 19-04-2016 APA12_RS03900 8b1e36e7f7120aacbde04a42bba6aaae 241 SMART SM00849 13 171 3.1E-33 T 19-04-2016 IPR001279 Metallo-beta-lactamase APA12_RS03900 8b1e36e7f7120aacbde04a42bba6aaae 241 SUPERFAMILY SSF56281 4 240 7.86E-69 T 19-04-2016 IPR001279 Metallo-beta-lactamase APA12_RS03900 8b1e36e7f7120aacbde04a42bba6aaae 241 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 6 236 2.3E-93 T 19-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 APA12_RS03900 8b1e36e7f7120aacbde04a42bba6aaae 241 Gene3D G3DSA:3.60.15.10 5 241 1.1E-85 T 19-04-2016 IPR001279 Metallo-beta-lactamase APA12_RS03900 8b1e36e7f7120aacbde04a42bba6aaae 241 Pfam PF00753 Metallo-beta-lactamase superfamily 15 171 3.1E-18 T 19-04-2016 IPR001279 Metallo-beta-lactamase APA12_RS03900 8b1e36e7f7120aacbde04a42bba6aaae 241 PIRSF PIRSF005457 1 241 1.3E-99 T 19-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 APA12_RS01030 b1feb72b9ccf141947a1456d4786e055 320 PANTHER PTHR30346:SF15 8 298 1.0E-70 T 19-04-2016 APA12_RS01030 b1feb72b9ccf141947a1456d4786e055 320 Gene3D G3DSA:3.40.190.10 181 279 6.1E-26 T 19-04-2016 APA12_RS01030 b1feb72b9ccf141947a1456d4786e055 320 Pfam PF03466 LysR substrate binding domain 93 301 5.7E-42 T 19-04-2016 IPR005119 LysR, substrate-binding APA12_RS01030 b1feb72b9ccf141947a1456d4786e055 320 Gene3D G3DSA:3.40.190.10 95 180 7.7E-17 T 19-04-2016 APA12_RS01030 b1feb72b9ccf141947a1456d4786e055 320 SUPERFAMILY SSF46785 6 115 1.58E-14 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS01030 b1feb72b9ccf141947a1456d4786e055 320 Gene3D G3DSA:1.10.10.10 7 83 6.2E-18 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS01030 b1feb72b9ccf141947a1456d4786e055 320 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 7.1E-14 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS01030 b1feb72b9ccf141947a1456d4786e055 320 PANTHER PTHR30346 8 298 1.0E-70 T 19-04-2016 APA12_RS01030 b1feb72b9ccf141947a1456d4786e055 320 SUPERFAMILY SSF53850 93 307 2.95E-38 T 19-04-2016 APA12_RS04985 a7d31c6d92a9b5b017699b97b875c14a 1084 SUPERFAMILY SSF52440 558 681 2.16E-44 T 19-04-2016 IPR016185 Pre-ATP-grasp domain APA12_RS04985 a7d31c6d92a9b5b017699b97b875c14a 1084 Gene3D G3DSA:3.40.50.1380 947 1080 1.7E-38 T 19-04-2016 IPR011607 Methylglyoxal synthase-like domain APA12_RS04985 a7d31c6d92a9b5b017699b97b875c14a 1084 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APA12_RS04985 a7d31c6d92a9b5b017699b97b875c14a 1084 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 848 855 - T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APA12_RS04985 a7d31c6d92a9b5b017699b97b875c14a 1084 SUPERFAMILY SSF56059 679 943 8.31E-97 T 19-04-2016 APA12_RS04985 a7d31c6d92a9b5b017699b97b875c14a 1084 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 679 884 1.4E-35 T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APA12_RS04985 a7d31c6d92a9b5b017699b97b875c14a 1084 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.6E-69 T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APA12_RS04985 a7d31c6d92a9b5b017699b97b875c14a 1084 Pfam PF02142 MGS-like domain 969 1051 1.0E-17 T 19-04-2016 IPR011607 Methylglyoxal synthase-like domain APA12_RS04985 a7d31c6d92a9b5b017699b97b875c14a 1084 SMART SM00851 965 1051 4.9E-30 T 19-04-2016 IPR011607 Methylglyoxal synthase-like domain APA12_RS04985 a7d31c6d92a9b5b017699b97b875c14a 1084 Gene3D G3DSA:3.40.50.20 534 667 1.7E-53 T 19-04-2016 IPR016185 Pre-ATP-grasp domain APA12_RS04985 a7d31c6d92a9b5b017699b97b875c14a 1084 Gene3D G3DSA:1.10.1030.10 399 533 2.8E-47 T 19-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APA12_RS04985 a7d31c6d92a9b5b017699b97b875c14a 1084 PANTHER PTHR11405:SF5 1 1081 0.0 T 19-04-2016 APA12_RS04985 a7d31c6d92a9b5b017699b97b875c14a 1084 PANTHER PTHR11405 1 1081 0.0 T 19-04-2016 APA12_RS04985 a7d31c6d92a9b5b017699b97b875c14a 1084 SUPERFAMILY SSF56059 128 400 1.73E-106 T 19-04-2016 APA12_RS04985 a7d31c6d92a9b5b017699b97b875c14a 1084 SUPERFAMILY SSF52440 1 127 9.21E-49 T 19-04-2016 IPR016185 Pre-ATP-grasp domain APA12_RS04985 a7d31c6d92a9b5b017699b97b875c14a 1084 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 379 397 8.6E-63 T 19-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APA12_RS04985 a7d31c6d92a9b5b017699b97b875c14a 1084 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 8.6E-63 T 19-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APA12_RS04985 a7d31c6d92a9b5b017699b97b875c14a 1084 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 8.6E-63 T 19-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APA12_RS04985 a7d31c6d92a9b5b017699b97b875c14a 1084 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 8.6E-63 T 19-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APA12_RS04985 a7d31c6d92a9b5b017699b97b875c14a 1084 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 8.6E-63 T 19-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APA12_RS04985 a7d31c6d92a9b5b017699b97b875c14a 1084 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 8.6E-63 T 19-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APA12_RS04985 a7d31c6d92a9b5b017699b97b875c14a 1084 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 8.6E-63 T 19-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APA12_RS04985 a7d31c6d92a9b5b017699b97b875c14a 1084 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 425 544 3.8E-41 T 19-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APA12_RS04985 a7d31c6d92a9b5b017699b97b875c14a 1084 Gene3D G3DSA:3.30.470.20 754 944 6.3E-70 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APA12_RS04985 a7d31c6d92a9b5b017699b97b875c14a 1084 Gene3D G3DSA:3.30.470.20 201 398 1.6E-75 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APA12_RS04985 a7d31c6d92a9b5b017699b97b875c14a 1084 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1071 12.978 T 19-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APA12_RS04985 a7d31c6d92a9b5b017699b97b875c14a 1084 SUPERFAMILY SSF52335 945 1081 2.49E-40 T 19-04-2016 IPR011607 Methylglyoxal synthase-like domain APA12_RS04985 a7d31c6d92a9b5b017699b97b875c14a 1084 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1062 0.0 T 19-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APA12_RS04985 a7d31c6d92a9b5b017699b97b875c14a 1084 Gene3D G3DSA:3.30.1490.20 692 753 3.0E-22 T 19-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APA12_RS04985 a7d31c6d92a9b5b017699b97b875c14a 1084 Gene3D G3DSA:3.30.1490.20 142 200 5.4E-22 T 19-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APA12_RS04985 a7d31c6d92a9b5b017699b97b875c14a 1084 SUPERFAMILY SSF48108 395 547 4.32E-46 T 19-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APA12_RS04985 a7d31c6d92a9b5b017699b97b875c14a 1084 SMART SM01096 422 544 3.4E-63 T 19-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APA12_RS04985 a7d31c6d92a9b5b017699b97b875c14a 1084 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 715 729 - T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APA12_RS04985 a7d31c6d92a9b5b017699b97b875c14a 1084 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1079 13.364 T 19-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APA12_RS04985 a7d31c6d92a9b5b017699b97b875c14a 1084 Gene3D G3DSA:3.40.50.20 3 108 4.5E-44 T 19-04-2016 IPR016185 Pre-ATP-grasp domain APA12_RS00370 4533036e8a9d098134d8576add2b24cf 642 Gene3D G3DSA:3.90.1310.10 140 257 5.3E-29 T 19-04-2016 APA12_RS00370 4533036e8a9d098134d8576add2b24cf 642 PANTHER PTHR30627 15 622 2.9E-192 T 19-04-2016 APA12_RS00370 4533036e8a9d098134d8576add2b24cf 642 Pfam PF03717 Penicillin-binding Protein dimerisation domain 75 244 4.4E-38 T 19-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 APA12_RS00370 4533036e8a9d098134d8576add2b24cf 642 PANTHER PTHR30627:SF2 15 622 2.9E-192 T 19-04-2016 APA12_RS00370 4533036e8a9d098134d8576add2b24cf 642 SUPERFAMILY SSF56519 66 258 7.19E-42 T 19-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 APA12_RS00370 4533036e8a9d098134d8576add2b24cf 642 SUPERFAMILY SSF56601 259 624 7.27E-98 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APA12_RS00370 4533036e8a9d098134d8576add2b24cf 642 Pfam PF00905 Penicillin binding protein transpeptidase domain 277 613 1.1E-74 T 19-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 APA12_RS00370 4533036e8a9d098134d8576add2b24cf 642 Gene3D G3DSA:3.40.710.10 258 617 3.0E-105 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APA12_RS00370 4533036e8a9d098134d8576add2b24cf 642 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 29 617 3.5E-210 T 19-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 APA12_RS12840 b83a47c38ff92232a5d404802ed7e2f8 315 PANTHER PTHR30537 2 314 1.2E-47 T 19-04-2016 APA12_RS12840 b83a47c38ff92232a5d404802ed7e2f8 315 Gene3D G3DSA:3.40.190.10 94 186 5.9E-15 T 19-04-2016 APA12_RS12840 b83a47c38ff92232a5d404802ed7e2f8 315 Pfam PF03466 LysR substrate binding domain 93 284 6.4E-18 T 19-04-2016 IPR005119 LysR, substrate-binding APA12_RS12840 b83a47c38ff92232a5d404802ed7e2f8 315 SUPERFAMILY SSF53850 92 304 1.59E-17 T 19-04-2016 APA12_RS12840 b83a47c38ff92232a5d404802ed7e2f8 315 Gene3D G3DSA:1.10.10.10 11 89 3.0E-16 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS12840 b83a47c38ff92232a5d404802ed7e2f8 315 PANTHER PTHR30537:SF26 2 314 1.2E-47 T 19-04-2016 APA12_RS12840 b83a47c38ff92232a5d404802ed7e2f8 315 Gene3D G3DSA:3.40.190.10 187 267 2.3E-15 T 19-04-2016 APA12_RS12840 b83a47c38ff92232a5d404802ed7e2f8 315 SUPERFAMILY SSF46785 9 111 2.11E-14 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS12840 b83a47c38ff92232a5d404802ed7e2f8 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 64 2.2E-12 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS12370 cbbdc7b2790a3b31d9d9006458f23750 716 SUPERFAMILY SSF54791 554 639 4.55E-22 T 19-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 APA12_RS12370 cbbdc7b2790a3b31d9d9006458f23750 716 PIRSF PIRSF005499 1 716 4.5E-293 T 19-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APA12_RS12370 cbbdc7b2790a3b31d9d9006458f23750 716 SMART SM00322 551 616 3.1E-12 T 19-04-2016 IPR004087 K Homology domain GO:0003676 APA12_RS12370 cbbdc7b2790a3b31d9d9006458f23750 716 SUPERFAMILY SSF50249 619 701 1.34E-19 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS12370 cbbdc7b2790a3b31d9d9006458f23750 716 Pfam PF03725 3' exoribonuclease family, domain 2 459 527 6.6E-5 T 19-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 APA12_RS12370 cbbdc7b2790a3b31d9d9006458f23750 716 Pfam PF03725 3' exoribonuclease family, domain 2 147 210 3.8E-14 T 19-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 APA12_RS12370 cbbdc7b2790a3b31d9d9006458f23750 716 Pfam PF00575 S1 RNA binding domain 617 689 1.2E-16 T 19-04-2016 IPR003029 S1 domain GO:0003676 APA12_RS12370 cbbdc7b2790a3b31d9d9006458f23750 716 Gene3D G3DSA:3.30.1370.10 550 616 2.2E-23 T 19-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 APA12_RS12370 cbbdc7b2790a3b31d9d9006458f23750 716 SMART SM00316 619 689 3.8E-21 T 19-04-2016 IPR022967 RNA-binding domain, S1 APA12_RS12370 cbbdc7b2790a3b31d9d9006458f23750 716 SUPERFAMILY SSF54211 292 487 2.99E-48 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APA12_RS12370 cbbdc7b2790a3b31d9d9006458f23750 716 Pfam PF01138 3' exoribonuclease family, domain 1 14 144 1.7E-22 T 19-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 APA12_RS12370 cbbdc7b2790a3b31d9d9006458f23750 716 Pfam PF01138 3' exoribonuclease family, domain 1 323 455 5.9E-20 T 19-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 APA12_RS12370 cbbdc7b2790a3b31d9d9006458f23750 716 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 690 0.0 T 19-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APA12_RS12370 cbbdc7b2790a3b31d9d9006458f23750 716 PANTHER PTHR11252:SF0 1 695 0.0 T 19-04-2016 APA12_RS12370 cbbdc7b2790a3b31d9d9006458f23750 716 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 243 319 3.7E-12 T 19-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APA12_RS12370 cbbdc7b2790a3b31d9d9006458f23750 716 PANTHER PTHR11252 1 695 0.0 T 19-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APA12_RS12370 cbbdc7b2790a3b31d9d9006458f23750 716 Gene3D G3DSA:3.30.230.70 3 224 5.1E-87 T 19-04-2016 IPR027408 PNPase/RNase PH domain APA12_RS12370 cbbdc7b2790a3b31d9d9006458f23750 716 Gene3D G3DSA:3.30.230.70 314 541 4.9E-88 T 19-04-2016 IPR027408 PNPase/RNase PH domain APA12_RS12370 cbbdc7b2790a3b31d9d9006458f23750 716 Pfam PF00013 KH domain 555 612 5.3E-11 T 19-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 APA12_RS12370 cbbdc7b2790a3b31d9d9006458f23750 716 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 692 30.748 T 19-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APA12_RS12370 cbbdc7b2790a3b31d9d9006458f23750 716 SUPERFAMILY SSF55666 145 234 5.61E-27 T 19-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 APA12_RS12370 cbbdc7b2790a3b31d9d9006458f23750 716 SUPERFAMILY SSF54211 2 144 2.02E-53 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APA12_RS12370 cbbdc7b2790a3b31d9d9006458f23750 716 Gene3D G3DSA:2.40.50.140 617 694 1.6E-22 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS12370 cbbdc7b2790a3b31d9d9006458f23750 716 SUPERFAMILY SSF55666 449 547 1.32E-27 T 19-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 APA12_RS12370 cbbdc7b2790a3b31d9d9006458f23750 716 Gene3D G3DSA:1.10.10.400 227 313 1.2E-16 T 19-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APA12_RS12985 c8bfb215543221491f0f322f8be7588a 545 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 441 541 4.9E-48 T 19-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 APA12_RS12985 c8bfb215543221491f0f322f8be7588a 545 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 12 34 2.0E-6 T 19-04-2016 APA12_RS12985 c8bfb215543221491f0f322f8be7588a 545 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 177 192 2.0E-6 T 19-04-2016 APA12_RS12985 c8bfb215543221491f0f322f8be7588a 545 PANTHER PTHR10617:SF107 6 468 1.1E-270 T 19-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 APA12_RS12985 c8bfb215543221491f0f322f8be7588a 545 Pfam PF13450 NAD(P)-binding Rossmann-like domain 15 56 7.3E-8 T 19-04-2016 APA12_RS12985 c8bfb215543221491f0f322f8be7588a 545 PANTHER PTHR10617 6 468 1.1E-270 T 19-04-2016 APA12_RS12985 c8bfb215543221491f0f322f8be7588a 545 SUPERFAMILY SSF51905 7 209 4.25E-55 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS12985 c8bfb215543221491f0f322f8be7588a 545 SUPERFAMILY SSF51905 305 443 4.25E-55 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS12985 c8bfb215543221491f0f322f8be7588a 545 SUPERFAMILY SSF54862 445 542 9.98E-26 T 19-04-2016 APA12_RS12985 c8bfb215543221491f0f322f8be7588a 545 SUPERFAMILY SSF54373 209 305 3.61E-36 T 19-04-2016 APA12_RS12985 c8bfb215543221491f0f322f8be7588a 545 Gene3D G3DSA:3.50.50.60 9 280 1.6E-47 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS04520 4d9f8b27d284f1e6bb79d23d2e75693c 163 PANTHER PTHR30009 35 134 2.5E-22 T 19-04-2016 APA12_RS04520 4d9f8b27d284f1e6bb79d23d2e75693c 163 PANTHER PTHR30009:SF6 35 134 2.5E-22 T 19-04-2016 APA12_RS04520 4d9f8b27d284f1e6bb79d23d2e75693c 163 Pfam PF03918 Cytochrome C biogenesis protein 17 155 6.9E-48 T 19-04-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family APA12_RS05480 6a16ff6f60085657d93864d83c3cab5c 189 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 19-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 APA12_RS05480 6a16ff6f60085657d93864d83c3cab5c 189 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 182 1.0E-39 T 19-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 APA12_RS05480 6a16ff6f60085657d93864d83c3cab5c 189 Pfam PF01066 CDP-alcohol phosphatidyltransferase 5 71 4.1E-16 T 19-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 APA12_RS05480 6a16ff6f60085657d93864d83c3cab5c 189 PIRSF PIRSF000847 1 189 1.0E-41 T 19-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 APA12_RS05480 6a16ff6f60085657d93864d83c3cab5c 189 PANTHER PTHR14269 4 180 8.1E-37 T 19-04-2016 APA12_RS10415 1769520d802262b393a7695136e98824 492 PIRSF PIRSF005522 15 492 6.8E-207 T 19-04-2016 IPR016450 Uncharacterised conserved protein UCP005522 APA12_RS10415 1769520d802262b393a7695136e98824 492 PANTHER PTHR34595:SF3 11 491 1.7E-256 T 19-04-2016 APA12_RS10415 1769520d802262b393a7695136e98824 492 Pfam PF14403 Circularly permuted ATP-grasp type 2 93 468 1.7E-156 T 19-04-2016 IPR025841 Circularly permuted ATP-grasp type 2 APA12_RS10415 1769520d802262b393a7695136e98824 492 PANTHER PTHR34595 11 491 1.7E-256 T 19-04-2016 APA12_RS10415 1769520d802262b393a7695136e98824 492 SUPERFAMILY SSF56059 338 483 9.83E-58 T 19-04-2016 APA12_RS10415 1769520d802262b393a7695136e98824 492 SUPERFAMILY SSF56059 41 231 9.83E-58 T 19-04-2016 APA12_RS08220 73882d43140c01c0b23d29d5a4db7652 265 Pfam PF09339 IclR helix-turn-helix domain 10 60 7.4E-14 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 APA12_RS08220 73882d43140c01c0b23d29d5a4db7652 265 SMART SM00346 8 97 3.5E-15 T 19-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 APA12_RS08220 73882d43140c01c0b23d29d5a4db7652 265 PANTHER PTHR30136 3 259 5.6E-45 T 19-04-2016 APA12_RS08220 73882d43140c01c0b23d29d5a4db7652 265 Gene3D G3DSA:1.10.10.10 2 75 3.8E-17 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS08220 73882d43140c01c0b23d29d5a4db7652 265 SUPERFAMILY SSF46785 8 76 3.26E-14 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS08220 73882d43140c01c0b23d29d5a4db7652 265 Pfam PF01614 Bacterial transcriptional regulator 127 252 4.1E-22 T 19-04-2016 IPR014757 Transcription regulator IclR, C-terminal APA12_RS08220 73882d43140c01c0b23d29d5a4db7652 265 Gene3D G3DSA:3.30.450.40 80 258 4.5E-40 T 19-04-2016 IPR029016 GAF domain-like APA12_RS08220 73882d43140c01c0b23d29d5a4db7652 265 SUPERFAMILY SSF55781 65 258 4.71E-38 T 19-04-2016 IPR029016 GAF domain-like APA12_RS08165 f48f08f76615cf1a39cfaf72b1bd029e 232 PANTHER PTHR18901:SF14 1 226 1.5E-44 T 19-04-2016 APA12_RS08165 f48f08f76615cf1a39cfaf72b1bd029e 232 Gene3D G3DSA:3.40.50.1000 94 226 2.5E-36 T 19-04-2016 IPR023214 HAD-like domain APA12_RS08165 f48f08f76615cf1a39cfaf72b1bd029e 232 Gene3D G3DSA:3.40.50.1000 3 20 2.5E-36 T 19-04-2016 IPR023214 HAD-like domain APA12_RS08165 f48f08f76615cf1a39cfaf72b1bd029e 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 143 159 3.2E-5 T 19-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APA12_RS08165 f48f08f76615cf1a39cfaf72b1bd029e 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 3.2E-5 T 19-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APA12_RS08165 f48f08f76615cf1a39cfaf72b1bd029e 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 112 125 3.2E-5 T 19-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APA12_RS08165 f48f08f76615cf1a39cfaf72b1bd029e 232 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 8 226 1.8E-51 T 19-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 APA12_RS08165 f48f08f76615cf1a39cfaf72b1bd029e 232 SUPERFAMILY SSF56784 2 226 6.08E-49 T 19-04-2016 IPR023214 HAD-like domain APA12_RS08165 f48f08f76615cf1a39cfaf72b1bd029e 232 Gene3D G3DSA:1.10.150.240 21 92 1.7E-12 T 19-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 APA12_RS08165 f48f08f76615cf1a39cfaf72b1bd029e 232 PANTHER PTHR18901 1 226 1.5E-44 T 19-04-2016 APA12_RS08165 f48f08f76615cf1a39cfaf72b1bd029e 232 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 198 2.7E-30 T 19-04-2016 IPR023214 HAD-like domain APA12_RS03005 76e048c092e011418a0c9dc66a682988 342 PANTHER PTHR11624 5 337 1.4E-165 T 19-04-2016 IPR033247 Transketolase family APA12_RS03005 76e048c092e011418a0c9dc66a682988 342 SUPERFAMILY SSF52518 2 214 3.48E-68 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS03005 76e048c092e011418a0c9dc66a682988 342 PANTHER PTHR11624:SF77 5 337 1.4E-165 T 19-04-2016 APA12_RS03005 76e048c092e011418a0c9dc66a682988 342 Pfam PF02780 Transketolase, C-terminal domain 204 326 9.4E-42 T 19-04-2016 IPR033248 Transketolase, C-terminal domain APA12_RS03005 76e048c092e011418a0c9dc66a682988 342 Pfam PF02779 Transketolase, pyrimidine binding domain 5 189 2.8E-55 T 19-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APA12_RS03005 76e048c092e011418a0c9dc66a682988 342 SUPERFAMILY SSF52922 199 333 2.88E-41 T 19-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APA12_RS03005 76e048c092e011418a0c9dc66a682988 342 Gene3D G3DSA:3.40.50.920 205 333 5.4E-44 T 19-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APA12_RS03005 76e048c092e011418a0c9dc66a682988 342 SMART SM00861 4 190 3.7E-66 T 19-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APA12_RS03005 76e048c092e011418a0c9dc66a682988 342 Gene3D G3DSA:3.40.50.970 3 204 5.0E-84 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS03460 acc742d4080787749b37bb805d944454 280 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 33 104 2.2E-12 T 19-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 APA12_RS03460 acc742d4080787749b37bb805d944454 280 Gene3D G3DSA:3.40.1280.10 117 265 4.9E-44 T 19-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APA12_RS03460 acc742d4080787749b37bb805d944454 280 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 34 264 2.6E-52 T 19-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 APA12_RS03460 acc742d4080787749b37bb805d944454 280 SUPERFAMILY SSF55315 29 103 5.65E-12 T 19-04-2016 IPR029064 50S ribosomal protein L30e-like APA12_RS03460 acc742d4080787749b37bb805d944454 280 Pfam PF00588 SpoU rRNA Methylase family 121 260 1.4E-35 T 19-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 APA12_RS03460 acc742d4080787749b37bb805d944454 280 PANTHER PTHR12029 30 271 3.3E-56 T 19-04-2016 APA12_RS03460 acc742d4080787749b37bb805d944454 280 SMART SM00967 33 109 2.4E-12 T 19-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 APA12_RS03460 acc742d4080787749b37bb805d944454 280 Gene3D G3DSA:3.30.1330.30 29 103 1.8E-13 T 19-04-2016 IPR029064 50S ribosomal protein L30e-like APA12_RS03460 acc742d4080787749b37bb805d944454 280 SUPERFAMILY SSF75217 97 267 5.23E-41 T 19-04-2016 IPR029028 Alpha/beta knot methyltransferases APA12_RS05115 399ecdceb2f89f858f764a41867002cd 196 SMART SM01058 37 147 3.7E-27 T 19-04-2016 IPR003711 CarD-like/TRCF domain APA12_RS05115 399ecdceb2f89f858f764a41867002cd 196 SUPERFAMILY SSF141259 30 102 2.09E-13 T 19-04-2016 IPR003711 CarD-like/TRCF domain APA12_RS05115 399ecdceb2f89f858f764a41867002cd 196 PANTHER PTHR38447 14 193 2.0E-33 T 19-04-2016 APA12_RS05115 399ecdceb2f89f858f764a41867002cd 196 Pfam PF02559 CarD-like/TRCF domain 38 145 1.2E-12 T 19-04-2016 IPR003711 CarD-like/TRCF domain APA12_RS09785 b42c5d66d812602964cd6c1d80f6c836 604 SUPERFAMILY SSF52467 202 374 9.0E-59 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APA12_RS09785 b42c5d66d812602964cd6c1d80f6c836 604 Gene3D G3DSA:3.40.50.970 18 189 3.8E-73 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS09785 b42c5d66d812602964cd6c1d80f6c836 604 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 208 343 2.8E-39 T 19-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 APA12_RS09785 b42c5d66d812602964cd6c1d80f6c836 604 PANTHER PTHR18968:SF116 1 589 1.4E-296 T 19-04-2016 APA12_RS09785 b42c5d66d812602964cd6c1d80f6c836 604 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 19 180 1.7E-59 T 19-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 APA12_RS09785 b42c5d66d812602964cd6c1d80f6c836 604 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 18 584 4.5E-227 T 19-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APA12_RS09785 b42c5d66d812602964cd6c1d80f6c836 604 PANTHER PTHR18968 1 589 1.4E-296 T 19-04-2016 APA12_RS09785 b42c5d66d812602964cd6c1d80f6c836 604 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 415 562 1.8E-47 T 19-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 APA12_RS09785 b42c5d66d812602964cd6c1d80f6c836 604 Gene3D G3DSA:3.40.50.970 384 594 2.3E-72 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS09785 b42c5d66d812602964cd6c1d80f6c836 604 SUPERFAMILY SSF52518 389 588 1.71E-66 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS09785 b42c5d66d812602964cd6c1d80f6c836 604 Gene3D G3DSA:3.40.50.1220 202 377 7.6E-58 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APA12_RS09785 b42c5d66d812602964cd6c1d80f6c836 604 SUPERFAMILY SSF52518 15 188 2.68E-63 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS06260 335d0128ad95dd8063c06e70bf996e8f 178 PANTHER PTHR10173:SF34 1 157 1.9E-79 T 19-04-2016 APA12_RS06260 335d0128ad95dd8063c06e70bf996e8f 178 Gene3D G3DSA:3.30.1060.10 1 156 5.2E-71 T 19-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 APA12_RS06260 335d0128ad95dd8063c06e70bf996e8f 178 PANTHER PTHR10173 1 157 1.9E-79 T 19-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 APA12_RS06260 335d0128ad95dd8063c06e70bf996e8f 178 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 2 156 1.6E-56 T 19-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 APA12_RS06260 335d0128ad95dd8063c06e70bf996e8f 178 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 161 35.922 T 19-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 APA12_RS06260 335d0128ad95dd8063c06e70bf996e8f 178 Pfam PF01625 Peptide methionine sulfoxide reductase 3 157 4.2E-63 T 19-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 APA12_RS06260 335d0128ad95dd8063c06e70bf996e8f 178 SUPERFAMILY SSF55068 1 167 1.1E-70 T 19-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 APA12_RS12005 2e4afde46dfdc677ffc0ad4a8082d919 244 SUPERFAMILY SSF51182 1 241 5.34E-25 T 19-04-2016 IPR011051 RmlC-like cupin domain APA12_RS12005 2e4afde46dfdc677ffc0ad4a8082d919 244 PANTHER PTHR13903:SF7 1 241 2.9E-17 T 19-04-2016 APA12_RS12005 2e4afde46dfdc677ffc0ad4a8082d919 244 Gene3D G3DSA:2.60.120.10 3 241 3.7E-20 T 19-04-2016 IPR014710 RmlC-like jelly roll fold APA12_RS12005 2e4afde46dfdc677ffc0ad4a8082d919 244 PANTHER PTHR13903 1 241 2.9E-17 T 19-04-2016 IPR012093 Pirin APA12_RS07950 75d140e51968e46aefc4fbb544f4cbd3 425 SUPERFAMILY SSF89796 4 422 3.53E-112 T 19-04-2016 IPR023606 CoA-transferase family III domain APA12_RS07950 75d140e51968e46aefc4fbb544f4cbd3 425 Hamap MF_00742 Formyl-CoA:oxalate CoA-transferase [frc]. 1 423 55.61 T 19-04-2016 IPR017659 Formyl-CoA:oxalate CoA-transferase GO:0008152|GO:0033608 MetaCyc: PWY-6695|UniPathway: UPA00540 APA12_RS07950 75d140e51968e46aefc4fbb544f4cbd3 425 Pfam PF02515 CoA-transferase family III 3 400 8.4E-87 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 APA12_RS07950 75d140e51968e46aefc4fbb544f4cbd3 425 PANTHER PTHR24023 261 410 1.3E-29 T 19-04-2016 APA12_RS07950 75d140e51968e46aefc4fbb544f4cbd3 425 PANTHER PTHR24023 31 231 1.3E-29 T 19-04-2016 APA12_RS07950 75d140e51968e46aefc4fbb544f4cbd3 425 Gene3D G3DSA:3.40.50.10540 3 224 2.1E-90 T 19-04-2016 IPR023606 CoA-transferase family III domain APA12_RS07950 75d140e51968e46aefc4fbb544f4cbd3 425 Gene3D G3DSA:3.40.50.10540 335 422 2.1E-90 T 19-04-2016 IPR023606 CoA-transferase family III domain APA12_RS07950 75d140e51968e46aefc4fbb544f4cbd3 425 TIGRFAM TIGR03253 oxalate_frc: formyl-CoA transferase 4 421 5.3E-192 T 19-04-2016 IPR017659 Formyl-CoA:oxalate CoA-transferase GO:0008152|GO:0033608 MetaCyc: PWY-6695|UniPathway: UPA00540 APA12_RS07950 75d140e51968e46aefc4fbb544f4cbd3 425 PANTHER PTHR24023:SF593 261 410 1.3E-29 T 19-04-2016 APA12_RS07950 75d140e51968e46aefc4fbb544f4cbd3 425 PANTHER PTHR24023:SF593 31 231 1.3E-29 T 19-04-2016 APA12_RS07950 75d140e51968e46aefc4fbb544f4cbd3 425 Gene3D G3DSA:3.30.1540.10 254 334 1.8E-28 T 19-04-2016 APA12_RS03860 c4dc301de8a9217c042d2410d1d19ffb 957 PANTHER PTHR23152 11 954 0.0 T 19-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 APA12_RS03860 c4dc301de8a9217c042d2410d1d19ffb 957 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 9 47 8.2E-13 T 19-04-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 APA12_RS03860 c4dc301de8a9217c042d2410d1d19ffb 957 SMART SM00861 607 800 6.1E-56 T 19-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APA12_RS03860 c4dc301de8a9217c042d2410d1d19ffb 957 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 11 950 0.0 T 19-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 APA12_RS03860 c4dc301de8a9217c042d2410d1d19ffb 957 SUPERFAMILY SSF52518 591 805 2.94E-48 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS03860 c4dc301de8a9217c042d2410d1d19ffb 957 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 805 951 6.9E-51 T 19-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 APA12_RS03860 c4dc301de8a9217c042d2410d1d19ffb 957 Pfam PF02779 Transketolase, pyrimidine binding domain 607 801 4.1E-62 T 19-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APA12_RS03860 c4dc301de8a9217c042d2410d1d19ffb 957 SUPERFAMILY SSF52518 124 549 1.47E-79 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS03860 c4dc301de8a9217c042d2410d1d19ffb 957 Gene3D G3DSA:3.40.50.970 168 546 4.5E-70 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS03860 c4dc301de8a9217c042d2410d1d19ffb 957 Gene3D G3DSA:3.40.50.970 657 806 2.6E-20 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS03860 c4dc301de8a9217c042d2410d1d19ffb 957 PIRSF PIRSF000157 2 953 0.0 T 19-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 APA12_RS03860 c4dc301de8a9217c042d2410d1d19ffb 957 Pfam PF00676 Dehydrogenase E1 component 221 538 6.8E-60 T 19-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 APA12_RS04725 f59396922cf1b417e1c20f73eec7cd79 92 SUPERFAMILY SSF54570 3 84 2.88E-34 T 19-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 APA12_RS04725 f59396922cf1b417e1c20f73eec7cd79 92 PANTHER PTHR11880 1 88 5.8E-48 T 19-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APA12_RS04725 f59396922cf1b417e1c20f73eec7cd79 92 Pfam PF00203 Ribosomal protein S19 3 83 1.4E-35 T 19-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APA12_RS04725 f59396922cf1b417e1c20f73eec7cd79 92 PIRSF PIRSF002144 1 92 5.0E-34 T 19-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APA12_RS04725 f59396922cf1b417e1c20f73eec7cd79 92 Gene3D G3DSA:3.30.860.10 1 90 1.5E-40 T 19-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 APA12_RS04725 f59396922cf1b417e1c20f73eec7cd79 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 19-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 APA12_RS04725 f59396922cf1b417e1c20f73eec7cd79 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 2.5E-41 T 19-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 APA12_RS04725 f59396922cf1b417e1c20f73eec7cd79 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.422 T 19-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APA12_RS04725 f59396922cf1b417e1c20f73eec7cd79 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 5.8E-21 T 19-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APA12_RS04725 f59396922cf1b417e1c20f73eec7cd79 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 5.8E-21 T 19-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APA12_RS04725 f59396922cf1b417e1c20f73eec7cd79 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 5.8E-21 T 19-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APA12_RS10960 061bdbf9095fe74a2fc8d2d5c207e7f0 449 Pfam PF00202 Aminotransferase class-III 34 445 1.6E-114 T 19-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APA12_RS10960 061bdbf9095fe74a2fc8d2d5c207e7f0 449 Gene3D G3DSA:3.90.1150.10 10 70 3.7E-36 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APA12_RS10960 061bdbf9095fe74a2fc8d2d5c207e7f0 449 Gene3D G3DSA:3.90.1150.10 351 448 3.7E-36 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APA12_RS10960 061bdbf9095fe74a2fc8d2d5c207e7f0 449 PANTHER PTHR11986:SF80 1 448 3.3E-199 T 19-04-2016 APA12_RS10960 061bdbf9095fe74a2fc8d2d5c207e7f0 449 SUPERFAMILY SSF53383 19 446 1.75E-116 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APA12_RS10960 061bdbf9095fe74a2fc8d2d5c207e7f0 449 Gene3D G3DSA:3.40.640.10 71 348 5.4E-86 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APA12_RS10960 061bdbf9095fe74a2fc8d2d5c207e7f0 449 PIRSF PIRSF000521 35 448 9.8E-32 T 19-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APA12_RS10960 061bdbf9095fe74a2fc8d2d5c207e7f0 449 PANTHER PTHR11986 1 448 3.3E-199 T 19-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APA12_RS10960 061bdbf9095fe74a2fc8d2d5c207e7f0 449 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 259 296 - T 19-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APA12_RS04565 ed68d84bb0556ad10651339fc9f3e455 285 Pfam PF12787 EcsC protein family 116 259 1.9E-24 T 19-04-2016 IPR024787 EcsC protein APA12_RS09755 0882c53febb6119d784d477a3aba3add 790 PANTHER PTHR24093:SF332 3 788 3.6E-261 T 19-04-2016 APA12_RS09755 0882c53febb6119d784d477a3aba3add 790 Gene3D G3DSA:3.30.70.100 71 152 1.2E-22 T 19-04-2016 APA12_RS09755 0882c53febb6119d784d477a3aba3add 790 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 204 783 2.0E-179 T 19-04-2016 APA12_RS09755 0882c53febb6119d784d477a3aba3add 790 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 257 758 4.1E-95 T 19-04-2016 IPR001757 P-type ATPase GO:0016021 APA12_RS09755 0882c53febb6119d784d477a3aba3add 790 SUPERFAMILY SSF56784 482 502 1.15E-55 T 19-04-2016 IPR023214 HAD-like domain APA12_RS09755 0882c53febb6119d784d477a3aba3add 790 SUPERFAMILY SSF56784 541 781 1.15E-55 T 19-04-2016 IPR023214 HAD-like domain APA12_RS09755 0882c53febb6119d784d477a3aba3add 790 Gene3D G3DSA:3.40.1110.10 499 608 1.2E-19 T 19-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 APA12_RS09755 0882c53febb6119d784d477a3aba3add 790 PANTHER PTHR24093 3 788 3.6E-261 T 19-04-2016 APA12_RS09755 0882c53febb6119d784d477a3aba3add 790 Pfam PF00403 Heavy-metal-associated domain 77 132 7.9E-12 T 19-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APA12_RS09755 0882c53febb6119d784d477a3aba3add 790 Pfam PF00403 Heavy-metal-associated domain 7 65 2.2E-10 T 19-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APA12_RS09755 0882c53febb6119d784d477a3aba3add 790 Gene3D G3DSA:2.70.150.10 249 385 3.0E-31 T 19-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APA12_RS09755 0882c53febb6119d784d477a3aba3add 790 Gene3D G3DSA:3.30.70.100 3 68 4.8E-20 T 19-04-2016 APA12_RS09755 0882c53febb6119d784d477a3aba3add 790 SUPERFAMILY SSF55008 70 139 4.45E-18 T 19-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APA12_RS09755 0882c53febb6119d784d477a3aba3add 790 Gene3D G3DSA:3.40.50.1000 609 750 1.9E-51 T 19-04-2016 IPR023214 HAD-like domain APA12_RS09755 0882c53febb6119d784d477a3aba3add 790 Gene3D G3DSA:3.40.50.1000 455 498 1.9E-51 T 19-04-2016 IPR023214 HAD-like domain APA12_RS09755 0882c53febb6119d784d477a3aba3add 790 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 222 783 4.0E-190 T 19-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 APA12_RS09755 0882c53febb6119d784d477a3aba3add 790 SUPERFAMILY SSF55008 3 69 1.57E-16 T 19-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APA12_RS09755 0882c53febb6119d784d477a3aba3add 790 Pfam PF00702 haloacid dehalogenase-like hydrolase 481 695 1.2E-47 T 19-04-2016 APA12_RS09755 0882c53febb6119d784d477a3aba3add 790 SUPERFAMILY SSF81653 286 384 2.75E-27 T 19-04-2016 APA12_RS09755 0882c53febb6119d784d477a3aba3add 790 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 486 492 - T 19-04-2016 IPR018303 P-type ATPase, phosphorylation site APA12_RS09755 0882c53febb6119d784d477a3aba3add 790 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 252 783 3.7E-121 T 19-04-2016 APA12_RS09755 0882c53febb6119d784d477a3aba3add 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 484 498 1.5E-25 T 19-04-2016 APA12_RS09755 0882c53febb6119d784d477a3aba3add 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 628 638 1.5E-25 T 19-04-2016 APA12_RS09755 0882c53febb6119d784d477a3aba3add 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 334 348 1.5E-25 T 19-04-2016 APA12_RS09755 0882c53febb6119d784d477a3aba3add 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 681 700 1.5E-25 T 19-04-2016 APA12_RS09755 0882c53febb6119d784d477a3aba3add 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 704 716 1.5E-25 T 19-04-2016 APA12_RS09755 0882c53febb6119d784d477a3aba3add 790 ProSitePatterns PS01047 Heavy-metal-associated domain. 76 104 - T 19-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 APA12_RS09755 0882c53febb6119d784d477a3aba3add 790 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 37 - T 19-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 APA12_RS09755 0882c53febb6119d784d477a3aba3add 790 Pfam PF00122 E1-E2 ATPase 255 475 1.4E-66 T 19-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APA12_RS09755 0882c53febb6119d784d477a3aba3add 790 SUPERFAMILY SSF81665 238 288 4.45E-11 T 19-04-2016 APA12_RS09755 0882c53febb6119d784d477a3aba3add 790 SUPERFAMILY SSF81665 385 478 4.45E-11 T 19-04-2016 APA12_RS00320 a1fcc6cc1acf065dfee7955c3094d98a 244 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 1.7E-106 T 19-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 APA12_RS00320 a1fcc6cc1acf065dfee7955c3094d98a 244 Gene3D G3DSA:3.30.230.70 5 237 6.0E-30 T 19-04-2016 IPR027408 PNPase/RNase PH domain APA12_RS00320 a1fcc6cc1acf065dfee7955c3094d98a 244 PANTHER PTHR11953 1 243 8.5E-73 T 19-04-2016 APA12_RS00320 a1fcc6cc1acf065dfee7955c3094d98a 244 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 19-04-2016 IPR018336 Ribonuclease PH, conserved site APA12_RS00320 a1fcc6cc1acf065dfee7955c3094d98a 244 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 45.856 T 19-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 APA12_RS00320 a1fcc6cc1acf065dfee7955c3094d98a 244 Pfam PF03725 3' exoribonuclease family, domain 2 159 224 1.1E-6 T 19-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 APA12_RS00320 a1fcc6cc1acf065dfee7955c3094d98a 244 Pfam PF01138 3' exoribonuclease family, domain 1 10 139 2.1E-22 T 19-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 APA12_RS00320 a1fcc6cc1acf065dfee7955c3094d98a 244 PANTHER PTHR11953:SF0 1 243 8.5E-73 T 19-04-2016 APA12_RS00320 a1fcc6cc1acf065dfee7955c3094d98a 244 SUPERFAMILY SSF55666 153 236 3.14E-21 T 19-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 APA12_RS00320 a1fcc6cc1acf065dfee7955c3094d98a 244 SUPERFAMILY SSF54211 1 181 8.6E-45 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APA12_RS03885 9fc4e92c77a43493ffdd8909cab7e0cd 429 Gene3D G3DSA:3.40.50.720 191 347 7.4E-49 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS03885 9fc4e92c77a43493ffdd8909cab7e0cd 429 SMART SM00997 189 348 1.7E-109 T 19-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 APA12_RS03885 9fc4e92c77a43493ffdd8909cab7e0cd 429 SUPERFAMILY SSF52283 349 429 6.23E-121 T 19-04-2016 APA12_RS03885 9fc4e92c77a43493ffdd8909cab7e0cd 429 SUPERFAMILY SSF52283 2 188 6.23E-121 T 19-04-2016 APA12_RS03885 9fc4e92c77a43493ffdd8909cab7e0cd 429 SMART SM00996 3 428 0.0 T 19-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 APA12_RS03885 9fc4e92c77a43493ffdd8909cab7e0cd 429 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 4 421 8.9E-191 T 19-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 APA12_RS03885 9fc4e92c77a43493ffdd8909cab7e0cd 429 SUPERFAMILY SSF51735 189 348 2.89E-76 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS03885 9fc4e92c77a43493ffdd8909cab7e0cd 429 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 1 421 48.293 T 19-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 APA12_RS03885 9fc4e92c77a43493ffdd8909cab7e0cd 429 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 189 348 1.2E-80 T 19-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 APA12_RS03885 9fc4e92c77a43493ffdd8909cab7e0cd 429 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 211 228 - T 19-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 APA12_RS03885 9fc4e92c77a43493ffdd8909cab7e0cd 429 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 75 89 - T 19-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 APA12_RS03885 9fc4e92c77a43493ffdd8909cab7e0cd 429 Gene3D G3DSA:3.40.50.1480 2 190 3.2E-145 T 19-04-2016 APA12_RS03885 9fc4e92c77a43493ffdd8909cab7e0cd 429 Gene3D G3DSA:3.40.50.1480 349 429 3.2E-145 T 19-04-2016 APA12_RS03885 9fc4e92c77a43493ffdd8909cab7e0cd 429 PANTHER PTHR23420 1 429 0.0 T 19-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 APA12_RS03885 9fc4e92c77a43493ffdd8909cab7e0cd 429 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 3 139 2.3E-74 T 19-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 APA12_RS03885 9fc4e92c77a43493ffdd8909cab7e0cd 429 PIRSF PIRSF001109 1 429 9.2E-198 T 19-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 APA12_RS06990 81db52c61b6082d73214187aa88962af 149 Gene3D G3DSA:3.20.20.140 71 149 1.9E-20 T 19-04-2016 APA12_RS06990 81db52c61b6082d73214187aa88962af 149 Gene3D G3DSA:2.30.40.10 2 70 2.0E-17 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APA12_RS06990 81db52c61b6082d73214187aa88962af 149 SUPERFAMILY SSF51338 1 97 8.2E-17 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APA12_RS03200 376e1bbf11b04355e84327358ed1ae8d 804 ProSitePatterns PS00363 Bacterial quinoprotein dehydrogenases signature 1. 173 201 - T 19-04-2016 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 APA12_RS03200 376e1bbf11b04355e84327358ed1ae8d 804 Gene3D G3DSA:2.140.10.10 578 800 1.6E-151 T 19-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain APA12_RS03200 376e1bbf11b04355e84327358ed1ae8d 804 Gene3D G3DSA:2.140.10.10 168 543 1.6E-151 T 19-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain APA12_RS03200 376e1bbf11b04355e84327358ed1ae8d 804 SMART SM00564 226 257 3.3E-4 T 19-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APA12_RS03200 376e1bbf11b04355e84327358ed1ae8d 804 SMART SM00564 348 389 77.0 T 19-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APA12_RS03200 376e1bbf11b04355e84327358ed1ae8d 804 SMART SM00564 291 323 750.0 T 19-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APA12_RS03200 376e1bbf11b04355e84327358ed1ae8d 804 SMART SM00564 721 754 0.36 T 19-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APA12_RS03200 376e1bbf11b04355e84327358ed1ae8d 804 SMART SM00564 406 467 860.0 T 19-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APA12_RS03200 376e1bbf11b04355e84327358ed1ae8d 804 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 15 798 0.0 T 19-04-2016 IPR017511 PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related GO:0016021|GO:0016614|GO:0048038|GO:0055114 APA12_RS03200 376e1bbf11b04355e84327358ed1ae8d 804 SUPERFAMILY SSF50998 567 798 9.16E-144 T 19-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APA12_RS03200 376e1bbf11b04355e84327358ed1ae8d 804 SUPERFAMILY SSF50998 167 531 9.16E-144 T 19-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APA12_RS03200 376e1bbf11b04355e84327358ed1ae8d 804 PANTHER PTHR32303 135 517 8.4E-266 T 19-04-2016 APA12_RS03200 376e1bbf11b04355e84327358ed1ae8d 804 PANTHER PTHR32303 586 799 8.4E-266 T 19-04-2016 APA12_RS03200 376e1bbf11b04355e84327358ed1ae8d 804 Pfam PF01011 PQQ enzyme repeat 672 707 4.3E-5 T 19-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat APA12_RS03200 376e1bbf11b04355e84327358ed1ae8d 804 Pfam PF01011 PQQ enzyme repeat 727 764 3.4E-5 T 19-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat APA12_RS03200 376e1bbf11b04355e84327358ed1ae8d 804 Pfam PF01011 PQQ enzyme repeat 363 396 8.8E-5 T 19-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat APA12_RS03200 376e1bbf11b04355e84327358ed1ae8d 804 Pfam PF01011 PQQ enzyme repeat 231 259 5.1E-5 T 19-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat APA12_RS03200 376e1bbf11b04355e84327358ed1ae8d 804 Pfam PF01011 PQQ enzyme repeat 452 477 1.9E-6 T 19-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat APA12_RS03200 376e1bbf11b04355e84327358ed1ae8d 804 PANTHER PTHR32303:SF4 135 517 8.4E-266 T 19-04-2016 APA12_RS03200 376e1bbf11b04355e84327358ed1ae8d 804 PANTHER PTHR32303:SF4 586 799 8.4E-266 T 19-04-2016 APA12_RS12880 6e3300c51b52b50a972bdbeab0b79ecb 597 SMART SM00382 384 570 2.5E-17 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS12880 6e3300c51b52b50a972bdbeab0b79ecb 597 Pfam PF00005 ABC transporter 376 524 2.5E-31 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS12880 6e3300c51b52b50a972bdbeab0b79ecb 597 Gene3D G3DSA:3.40.50.300 359 588 5.5E-76 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS12880 6e3300c51b52b50a972bdbeab0b79ecb 597 ProSitePatterns PS00211 ABC transporters family signature. 496 510 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APA12_RS12880 6e3300c51b52b50a972bdbeab0b79ecb 597 Pfam PF00664 ABC transporter transmembrane region 41 297 3.3E-14 T 19-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APA12_RS12880 6e3300c51b52b50a972bdbeab0b79ecb 597 PANTHER PTHR24221 36 597 1.2E-171 T 19-04-2016 APA12_RS12880 6e3300c51b52b50a972bdbeab0b79ecb 597 SUPERFAMILY SSF52540 348 595 2.94E-86 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS12880 6e3300c51b52b50a972bdbeab0b79ecb 597 SUPERFAMILY SSF90123 31 344 2.09E-42 T 19-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APA12_RS12880 6e3300c51b52b50a972bdbeab0b79ecb 597 Gene3D G3DSA:1.20.1560.10 35 339 2.9E-36 T 19-04-2016 APA12_RS12215 6d9ffdcc63264d3fee0af21dc9a97561 296 Pfam PF00665 Integrase core domain 125 239 1.6E-25 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APA12_RS12215 6d9ffdcc63264d3fee0af21dc9a97561 296 Pfam PF13276 HTH-like domain 45 100 1.4E-17 T 19-04-2016 IPR025948 HTH-like domain APA12_RS12215 6d9ffdcc63264d3fee0af21dc9a97561 296 PANTHER PTHR32552 3 295 2.5E-70 T 19-04-2016 APA12_RS12215 6d9ffdcc63264d3fee0af21dc9a97561 296 SUPERFAMILY SSF53098 118 283 2.88E-36 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS12215 6d9ffdcc63264d3fee0af21dc9a97561 296 Gene3D G3DSA:3.30.420.10 119 279 2.7E-34 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS12185 6d9ffdcc63264d3fee0af21dc9a97561 296 Pfam PF00665 Integrase core domain 125 239 1.6E-25 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APA12_RS12185 6d9ffdcc63264d3fee0af21dc9a97561 296 Pfam PF13276 HTH-like domain 45 100 1.4E-17 T 19-04-2016 IPR025948 HTH-like domain APA12_RS12185 6d9ffdcc63264d3fee0af21dc9a97561 296 PANTHER PTHR32552 3 295 2.5E-70 T 19-04-2016 APA12_RS12185 6d9ffdcc63264d3fee0af21dc9a97561 296 SUPERFAMILY SSF53098 118 283 2.88E-36 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS12185 6d9ffdcc63264d3fee0af21dc9a97561 296 Gene3D G3DSA:3.30.420.10 119 279 2.7E-34 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS07490 6771d97ce4ae690df2dba0a150a22f2e 419 Pfam PF00994 Probable molybdopterin binding domain 213 331 1.0E-22 T 19-04-2016 IPR001453 MoaB/Mog domain APA12_RS07490 6771d97ce4ae690df2dba0a150a22f2e 419 PANTHER PTHR10192 20 411 3.8E-86 T 19-04-2016 APA12_RS07490 6771d97ce4ae690df2dba0a150a22f2e 419 Gene3D G3DSA:3.40.980.10 181 340 6.5E-43 T 19-04-2016 IPR001453 MoaB/Mog domain APA12_RS07490 6771d97ce4ae690df2dba0a150a22f2e 419 SUPERFAMILY SSF63882 18 194 6.93E-45 T 19-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 APA12_RS07490 6771d97ce4ae690df2dba0a150a22f2e 419 SMART SM00852 198 332 6.9E-19 T 19-04-2016 IPR001453 MoaB/Mog domain APA12_RS07490 6771d97ce4ae690df2dba0a150a22f2e 419 SUPERFAMILY SSF63867 348 417 9.94E-5 T 19-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 APA12_RS07490 6771d97ce4ae690df2dba0a150a22f2e 419 Pfam PF03453 MoeA N-terminal region (domain I and II) 23 185 7.3E-29 T 19-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 APA12_RS07490 6771d97ce4ae690df2dba0a150a22f2e 419 SUPERFAMILY SSF53218 188 337 1.7E-29 T 19-04-2016 IPR001453 MoaB/Mog domain APA12_RS07490 6771d97ce4ae690df2dba0a150a22f2e 419 Gene3D G3DSA:2.170.190.11 66 150 1.2E-22 T 19-04-2016 APA12_RS07490 6771d97ce4ae690df2dba0a150a22f2e 419 Gene3D G3DSA:3.90.105.10 151 180 4.2E-11 T 19-04-2016 APA12_RS03850 0ed0f5c7fbf85d697d30ee9e04a64e11 112 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 42 88 3.5E-18 T 19-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APA12_RS03850 0ed0f5c7fbf85d697d30ee9e04a64e11 112 PANTHER PTHR33930:SF2 1 109 5.1E-28 T 19-04-2016 APA12_RS03850 0ed0f5c7fbf85d697d30ee9e04a64e11 112 PANTHER PTHR33930 1 109 5.1E-28 T 19-04-2016 APA12_RS03850 0ed0f5c7fbf85d697d30ee9e04a64e11 112 Gene3D G3DSA:1.20.1290.10 1 110 5.9E-34 T 19-04-2016 IPR029032 AhpD-like APA12_RS03850 0ed0f5c7fbf85d697d30ee9e04a64e11 112 SUPERFAMILY SSF69118 4 109 1.7E-27 T 19-04-2016 IPR029032 AhpD-like APA12_RS03850 0ed0f5c7fbf85d697d30ee9e04a64e11 112 Pfam PF02627 Carboxymuconolactone decarboxylase family 38 105 7.8E-21 T 19-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APA12_RS12745 b195a500a746e14c85fdca0fb9c222b0 199 Pfam PF00005 ABC transporter 2 138 1.3E-29 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS12745 b195a500a746e14c85fdca0fb9c222b0 199 PANTHER PTHR24220:SF508 1 176 1.6E-63 T 19-04-2016 APA12_RS12745 b195a500a746e14c85fdca0fb9c222b0 199 SMART SM00382 11 183 2.8E-9 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS12745 b195a500a746e14c85fdca0fb9c222b0 199 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 1 181 1.0E-60 T 19-04-2016 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 APA12_RS12745 b195a500a746e14c85fdca0fb9c222b0 199 Gene3D G3DSA:3.40.50.300 1 169 1.1E-41 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS12745 b195a500a746e14c85fdca0fb9c222b0 199 SUPERFAMILY SSF52540 1 169 5.33E-41 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS12745 b195a500a746e14c85fdca0fb9c222b0 199 PANTHER PTHR24220 1 176 1.6E-63 T 19-04-2016 APA12_RS06150 ab7450ce2add5fd2a502b86d6a0b33bd 336 SUPERFAMILY SSF52518 15 335 1.43E-106 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS06150 ab7450ce2add5fd2a502b86d6a0b33bd 336 Gene3D G3DSA:3.40.50.970 14 333 1.4E-137 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS06150 ab7450ce2add5fd2a502b86d6a0b33bd 336 PANTHER PTHR11516:SF40 18 332 1.8E-176 T 19-04-2016 APA12_RS06150 ab7450ce2add5fd2a502b86d6a0b33bd 336 PANTHER PTHR11516 18 332 1.8E-176 T 19-04-2016 APA12_RS06150 ab7450ce2add5fd2a502b86d6a0b33bd 336 TIGRFAM TIGR03182 PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 21 332 8.2E-150 T 19-04-2016 IPR017597 Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y GO:0004739|GO:0006086|GO:0043231 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 APA12_RS06150 ab7450ce2add5fd2a502b86d6a0b33bd 336 Pfam PF00676 Dehydrogenase E1 component 29 325 2.7E-106 T 19-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 APA12_RS04920 ddf2e8cc520bedefc8281c6f6bb7ae44 339 SMART SM00382 56 200 0.003 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS04920 ddf2e8cc520bedefc8281c6f6bb7ae44 339 Gene3D G3DSA:3.40.50.300 41 208 2.4E-40 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS04920 ddf2e8cc520bedefc8281c6f6bb7ae44 339 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 59 192 1.7E-58 T 19-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 APA12_RS04920 ddf2e8cc520bedefc8281c6f6bb7ae44 339 PANTHER PTHR11603 18 338 2.6E-115 T 19-04-2016 APA12_RS04920 ddf2e8cc520bedefc8281c6f6bb7ae44 339 PIRSF PIRSF002849 1 339 4.0E-114 T 19-04-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted APA12_RS04920 ddf2e8cc520bedefc8281c6f6bb7ae44 339 PANTHER PTHR11603:SF156 18 338 2.6E-115 T 19-04-2016 APA12_RS04920 ddf2e8cc520bedefc8281c6f6bb7ae44 339 Gene3D G3DSA:1.10.8.300 223 337 1.1E-31 T 19-04-2016 APA12_RS04920 ddf2e8cc520bedefc8281c6f6bb7ae44 339 SUPERFAMILY SSF52540 29 315 1.13E-41 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS03290 2f935992915be9ffcc902de04e64c9db 173 Pfam PF01765 Ribosome recycling factor 8 170 1.0E-57 T 19-04-2016 IPR023584 Ribosome recycling factor domain APA12_RS03290 2f935992915be9ffcc902de04e64c9db 173 Hamap MF_00040 Ribosome-recycling factor [frr]. 1 173 22.681 T 19-04-2016 IPR002661 Ribosome recycling factor GO:0006412 APA12_RS03290 2f935992915be9ffcc902de04e64c9db 173 PANTHER PTHR20982 1 173 7.8E-73 T 19-04-2016 IPR002661 Ribosome recycling factor GO:0006412 APA12_RS03290 2f935992915be9ffcc902de04e64c9db 173 TIGRFAM TIGR00496 frr: ribosome recycling factor 1 173 1.8E-59 T 19-04-2016 IPR002661 Ribosome recycling factor GO:0006412 APA12_RS03290 2f935992915be9ffcc902de04e64c9db 173 SUPERFAMILY SSF55194 1 170 3.4E-62 T 19-04-2016 IPR023584 Ribosome recycling factor domain APA12_RS03290 2f935992915be9ffcc902de04e64c9db 173 Gene3D G3DSA:1.10.132.20 54 173 1.8E-40 T 19-04-2016 IPR023584 Ribosome recycling factor domain APA12_RS12995 68769b69868eb28db19dc60453b71a57 461 SUPERFAMILY SSF102114 7 436 3.01E-112 T 19-04-2016 APA12_RS12995 68769b69868eb28db19dc60453b71a57 461 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 8 444 8.6E-129 T 19-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 APA12_RS12995 68769b69868eb28db19dc60453b71a57 461 SMART SM00729 50 271 2.1E-43 T 19-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APA12_RS12995 68769b69868eb28db19dc60453b71a57 461 PIRSF PIRSF000167 4 449 7.9E-156 T 19-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 APA12_RS12995 68769b69868eb28db19dc60453b71a57 461 PANTHER PTHR13932:SF6 8 445 7.9E-172 T 19-04-2016 APA12_RS12995 68769b69868eb28db19dc60453b71a57 461 PANTHER PTHR13932 8 445 7.9E-172 T 19-04-2016 APA12_RS12995 68769b69868eb28db19dc60453b71a57 461 Gene3D G3DSA:3.80.30.20 51 251 5.8E-25 T 19-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APA12_RS12995 68769b69868eb28db19dc60453b71a57 461 Pfam PF06969 HemN C-terminal domain 365 422 1.4E-7 T 19-04-2016 IPR010723 HemN, C-terminal APA12_RS12995 68769b69868eb28db19dc60453b71a57 461 Pfam PF04055 Radical SAM superfamily 56 225 2.7E-18 T 19-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APA12_RS01595 53ae0b0ccdcd9b81fbc3df80db79ff74 429 Gene3D G3DSA:3.40.440.10 195 264 1.4E-65 T 19-04-2016 APA12_RS01595 53ae0b0ccdcd9b81fbc3df80db79ff74 429 Gene3D G3DSA:3.40.440.10 1 92 1.4E-65 T 19-04-2016 APA12_RS01595 53ae0b0ccdcd9b81fbc3df80db79ff74 429 Pfam PF00709 Adenylosuccinate synthetase 5 421 1.8E-170 T 19-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APA12_RS01595 53ae0b0ccdcd9b81fbc3df80db79ff74 429 Gene3D G3DSA:3.90.170.10 265 423 5.0E-69 T 19-04-2016 APA12_RS01595 53ae0b0ccdcd9b81fbc3df80db79ff74 429 Gene3D G3DSA:1.10.300.10 102 194 3.4E-30 T 19-04-2016 APA12_RS01595 53ae0b0ccdcd9b81fbc3df80db79ff74 429 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 19-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APA12_RS01595 53ae0b0ccdcd9b81fbc3df80db79ff74 429 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 429 208.74 T 19-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APA12_RS01595 53ae0b0ccdcd9b81fbc3df80db79ff74 429 PANTHER PTHR11846 1 426 2.6E-223 T 19-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APA12_RS01595 53ae0b0ccdcd9b81fbc3df80db79ff74 429 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 132 143 - T 19-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 APA12_RS01595 53ae0b0ccdcd9b81fbc3df80db79ff74 429 SMART SM00788 3 422 3.7E-283 T 19-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APA12_RS01595 53ae0b0ccdcd9b81fbc3df80db79ff74 429 SUPERFAMILY SSF52540 1 423 7.65E-168 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS01595 53ae0b0ccdcd9b81fbc3df80db79ff74 429 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 427 1.9E-155 T 19-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APA12_RS04815 cb896fcb9c70563cad3ad545695bd25d 125 SUPERFAMILY SSF46946 2 122 3.53E-46 T 19-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 APA12_RS04815 cb896fcb9c70563cad3ad545695bd25d 125 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 6.7E-54 T 19-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04815 cb896fcb9c70563cad3ad545695bd25d 125 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 120 28.275 T 19-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04815 cb896fcb9c70563cad3ad545695bd25d 125 PIRSF PIRSF002134 1 125 2.1E-45 T 19-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04815 cb896fcb9c70563cad3ad545695bd25d 125 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 19-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 APA12_RS04815 cb896fcb9c70563cad3ad545695bd25d 125 Pfam PF00416 Ribosomal protein S13/S18 3 109 1.1E-30 T 19-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04815 cb896fcb9c70563cad3ad545695bd25d 125 Gene3D G3DSA:4.10.910.10 73 124 1.1E-28 T 19-04-2016 IPR027437 30s ribosomal protein S13, C-terminal APA12_RS04815 cb896fcb9c70563cad3ad545695bd25d 125 PANTHER PTHR10871 2 125 3.3E-66 T 19-04-2016 APA12_RS04815 cb896fcb9c70563cad3ad545695bd25d 125 Gene3D G3DSA:1.10.8.50 2 72 2.8E-29 T 19-04-2016 APA12_RS06140 fd0778a33de32638c1309b032ee5246e 414 SUPERFAMILY SSF51230 1 88 1.57E-28 T 19-04-2016 IPR011053 Single hybrid motif APA12_RS06140 fd0778a33de32638c1309b032ee5246e 414 PANTHER PTHR23151:SF9 3 414 9.4E-195 T 19-04-2016 APA12_RS06140 fd0778a33de32638c1309b032ee5246e 414 Gene3D G3DSA:2.40.50.100 1 89 8.8E-35 T 19-04-2016 APA12_RS06140 fd0778a33de32638c1309b032ee5246e 414 PANTHER PTHR23151 3 414 9.4E-195 T 19-04-2016 APA12_RS06140 fd0778a33de32638c1309b032ee5246e 414 TIGRFAM TIGR01349 PDHac_trf_mito: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 4 414 5.5E-159 T 19-04-2016 IPR006257 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex GO:0004742|GO:0006090|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 APA12_RS06140 fd0778a33de32638c1309b032ee5246e 414 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 185 413 1.0E-83 T 19-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 APA12_RS06140 fd0778a33de32638c1309b032ee5246e 414 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 19-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site APA12_RS06140 fd0778a33de32638c1309b032ee5246e 414 Gene3D G3DSA:3.30.559.10 186 413 4.1E-87 T 19-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain APA12_RS06140 fd0778a33de32638c1309b032ee5246e 414 Pfam PF00364 Biotin-requiring enzyme 4 77 6.0E-20 T 19-04-2016 IPR000089 Biotin/lipoyl attachment APA12_RS06140 fd0778a33de32638c1309b032ee5246e 414 Gene3D G3DSA:4.10.320.10 126 172 3.9E-21 T 19-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APA12_RS06140 fd0778a33de32638c1309b032ee5246e 414 SUPERFAMILY SSF52777 186 413 2.13E-80 T 19-04-2016 APA12_RS06140 fd0778a33de32638c1309b032ee5246e 414 SUPERFAMILY SSF47005 126 167 3.92E-13 T 19-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APA12_RS06140 fd0778a33de32638c1309b032ee5246e 414 Pfam PF02817 e3 binding domain 128 163 5.8E-18 T 19-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APA12_RS02255 8105fb97ead5f9dbfeba558abb4449f6 323 PANTHER PTHR11728 1 321 1.6E-94 T 19-04-2016 APA12_RS02255 8105fb97ead5f9dbfeba558abb4449f6 323 SUPERFAMILY SSF51735 2 168 7.19E-32 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS02255 8105fb97ead5f9dbfeba558abb4449f6 323 PANTHER PTHR11728:SF1 1 321 1.6E-94 T 19-04-2016 APA12_RS02255 8105fb97ead5f9dbfeba558abb4449f6 323 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 3 310 32.897 T 19-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APA12_RS02255 8105fb97ead5f9dbfeba558abb4449f6 323 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 7 24 6.7E-35 T 19-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APA12_RS02255 8105fb97ead5f9dbfeba558abb4449f6 323 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 121 141 6.7E-35 T 19-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APA12_RS02255 8105fb97ead5f9dbfeba558abb4449f6 323 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 226 243 6.7E-35 T 19-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APA12_RS02255 8105fb97ead5f9dbfeba558abb4449f6 323 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 186 210 6.7E-35 T 19-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APA12_RS02255 8105fb97ead5f9dbfeba558abb4449f6 323 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 161 185 6.7E-35 T 19-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APA12_RS02255 8105fb97ead5f9dbfeba558abb4449f6 323 Gene3D G3DSA:1.10.1040.10 172 314 2.1E-47 T 19-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APA12_RS02255 8105fb97ead5f9dbfeba558abb4449f6 323 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 176 197 - T 19-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APA12_RS02255 8105fb97ead5f9dbfeba558abb4449f6 323 Gene3D G3DSA:3.40.50.720 1 171 4.0E-39 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS02255 8105fb97ead5f9dbfeba558abb4449f6 323 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 168 304 3.7E-43 T 19-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APA12_RS02255 8105fb97ead5f9dbfeba558abb4449f6 323 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 5 147 2.8E-23 T 19-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APA12_RS02255 8105fb97ead5f9dbfeba558abb4449f6 323 SUPERFAMILY SSF48179 168 319 5.95E-46 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APA12_RS02255 8105fb97ead5f9dbfeba558abb4449f6 323 PIRSF PIRSF000114 1 320 6.3E-76 T 19-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APA12_RS13285 f5039339a70ce6d4bbf69734b7701267 143 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 136 2.9E-30 T 19-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 APA12_RS13285 f5039339a70ce6d4bbf69734b7701267 143 PANTHER PTHR30558:SF7 9 138 5.0E-42 T 19-04-2016 APA12_RS13285 f5039339a70ce6d4bbf69734b7701267 143 TIGRFAM TIGR02801 tolR: protein TolR 16 135 2.2E-42 T 19-04-2016 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 APA12_RS13285 f5039339a70ce6d4bbf69734b7701267 143 PANTHER PTHR30558 9 138 5.0E-42 T 19-04-2016 APA12_RS02940 1b52a63081bc6d977e2cad523621130f 530 Pfam PF00732 GMC oxidoreductase 5 295 1.9E-86 T 19-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 APA12_RS02940 1b52a63081bc6d977e2cad523621130f 530 PANTHER PTHR11552 5 527 1.9E-198 T 19-04-2016 APA12_RS02940 1b52a63081bc6d977e2cad523621130f 530 Pfam PF05199 GMC oxidoreductase 387 523 3.3E-34 T 19-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 APA12_RS02940 1b52a63081bc6d977e2cad523621130f 530 SUPERFAMILY SSF54373 290 473 4.22E-50 T 19-04-2016 APA12_RS02940 1b52a63081bc6d977e2cad523621130f 530 PIRSF PIRSF000137 2 530 6.9E-143 T 19-04-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 APA12_RS02940 1b52a63081bc6d977e2cad523621130f 530 Gene3D G3DSA:3.50.50.60 187 313 5.7E-113 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS02940 1b52a63081bc6d977e2cad523621130f 530 Gene3D G3DSA:3.50.50.60 466 528 5.7E-113 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS02940 1b52a63081bc6d977e2cad523621130f 530 Gene3D G3DSA:3.50.50.60 3 126 5.7E-113 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS02940 1b52a63081bc6d977e2cad523621130f 530 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 254 268 - T 19-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 APA12_RS02940 1b52a63081bc6d977e2cad523621130f 530 SUPERFAMILY SSF51905 1 288 1.12E-83 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS02940 1b52a63081bc6d977e2cad523621130f 530 SUPERFAMILY SSF51905 472 528 1.12E-83 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS02940 1b52a63081bc6d977e2cad523621130f 530 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 81 104 - T 19-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 APA12_RS01650 a15d7022f62ea0a6bb67b0bb917b1d7c 434 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 275 296 1.1E-9 T 19-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APA12_RS01650 a15d7022f62ea0a6bb67b0bb917b1d7c 434 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 80 100 1.1E-9 T 19-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APA12_RS01650 a15d7022f62ea0a6bb67b0bb917b1d7c 434 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 308 332 1.1E-9 T 19-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APA12_RS01650 a15d7022f62ea0a6bb67b0bb917b1d7c 434 Pfam PF13533 Biotin-lipoyl like 70 104 6.5E-7 T 19-04-2016 APA12_RS01650 a15d7022f62ea0a6bb67b0bb917b1d7c 434 Gene3D G3DSA:2.40.50.100 256 292 4.1E-13 T 19-04-2016 APA12_RS01650 a15d7022f62ea0a6bb67b0bb917b1d7c 434 Gene3D G3DSA:2.40.50.100 64 100 4.1E-13 T 19-04-2016 APA12_RS01650 a15d7022f62ea0a6bb67b0bb917b1d7c 434 SUPERFAMILY SSF111369 68 138 3.14E-5 T 19-04-2016 APA12_RS01650 a15d7022f62ea0a6bb67b0bb917b1d7c 434 Pfam PF13437 HlyD family secretion protein 264 351 5.7E-13 T 19-04-2016 APA12_RS01650 a15d7022f62ea0a6bb67b0bb917b1d7c 434 PANTHER PTHR30386:SF8 1 432 9.2E-58 T 19-04-2016 APA12_RS01650 a15d7022f62ea0a6bb67b0bb917b1d7c 434 PANTHER PTHR30386 1 432 9.2E-58 T 19-04-2016 APA12_RS13160 b328162ff3482115856518757ba6a4db 364 SUPERFAMILY SSF53756 59 347 2.12E-56 T 19-04-2016 APA12_RS13160 b328162ff3482115856518757ba6a4db 364 Pfam PF13439 Glycosyltransferase Family 4 57 163 2.6E-7 T 19-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APA12_RS13160 b328162ff3482115856518757ba6a4db 364 PANTHER PTHR12526 134 347 6.0E-40 T 19-04-2016 APA12_RS13160 b328162ff3482115856518757ba6a4db 364 Pfam PF00534 Glycosyl transferases group 1 171 334 6.2E-27 T 19-04-2016 IPR001296 Glycosyl transferase, family 1 APA12_RS13160 b328162ff3482115856518757ba6a4db 364 Gene3D G3DSA:3.40.50.2000 173 334 2.7E-26 T 19-04-2016 APA12_RS12320 e73d82976cd59f9b0e3f42e4fe14f66f 290 TIGRFAM TIGR00417 speE: spermidine synthase 5 280 4.4E-90 T 19-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 APA12_RS12320 e73d82976cd59f9b0e3f42e4fe14f66f 290 Pfam PF01564 Spermine/spermidine synthase 5 240 1.0E-71 T 19-04-2016 APA12_RS12320 e73d82976cd59f9b0e3f42e4fe14f66f 290 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 4 286 36.45 T 19-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 APA12_RS12320 e73d82976cd59f9b0e3f42e4fe14f66f 290 PANTHER PTHR11558 1 288 1.2E-108 T 19-04-2016 APA12_RS12320 e73d82976cd59f9b0e3f42e4fe14f66f 290 Gene3D G3DSA:3.40.50.150 56 286 4.7E-73 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS12320 e73d82976cd59f9b0e3f42e4fe14f66f 290 Gene3D G3DSA:2.30.140.10 3 55 8.4E-19 T 19-04-2016 APA12_RS12320 e73d82976cd59f9b0e3f42e4fe14f66f 290 SUPERFAMILY SSF53335 4 285 1.2E-82 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS07610 ba8febed4cbfcc5beff034cb773de6d3 605 PANTHER PTHR32507:SF0 1 499 2.2E-104 T 19-04-2016 APA12_RS07610 ba8febed4cbfcc5beff034cb773de6d3 605 Pfam PF02254 TrkA-N domain 406 495 4.3E-6 T 19-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 APA12_RS07610 ba8febed4cbfcc5beff034cb773de6d3 605 SUPERFAMILY SSF51735 406 497 2.3E-6 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS07610 ba8febed4cbfcc5beff034cb773de6d3 605 Pfam PF00999 Sodium/hydrogen exchanger family 10 391 1.0E-35 T 19-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 APA12_RS07610 ba8febed4cbfcc5beff034cb773de6d3 605 PANTHER PTHR32507 1 499 2.2E-104 T 19-04-2016 APA12_RS07610 ba8febed4cbfcc5beff034cb773de6d3 605 Gene3D G3DSA:3.40.50.720 405 496 9.2E-8 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS09565 06322fa6e6717db648e3d3820b66b836 375 Gene3D G3DSA:2.30.130.10 282 373 1.5E-26 T 19-04-2016 IPR015947 PUA-like domain APA12_RS09565 06322fa6e6717db648e3d3820b66b836 375 SUPERFAMILY SSF88697 285 374 3.88E-25 T 19-04-2016 IPR015947 PUA-like domain APA12_RS09565 06322fa6e6717db648e3d3820b66b836 375 PANTHER PTHR11063:SF12 6 375 1.3E-109 T 19-04-2016 APA12_RS09565 06322fa6e6717db648e3d3820b66b836 375 Hamap MF_00456 Glutamate 5-kinase [proB]. 13 266 33.722 T 19-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APA12_RS09565 06322fa6e6717db648e3d3820b66b836 375 TIGRFAM TIGR01027 proB: glutamate 5-kinase 13 373 1.4E-118 T 19-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APA12_RS09565 06322fa6e6717db648e3d3820b66b836 375 SUPERFAMILY SSF53633 13 264 9.16E-63 T 19-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APA12_RS09565 06322fa6e6717db648e3d3820b66b836 375 PRINTS PR00474 Glutamate 5-kinase family signature 157 184 4.2E-44 T 19-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APA12_RS09565 06322fa6e6717db648e3d3820b66b836 375 PRINTS PR00474 Glutamate 5-kinase family signature 125 146 4.2E-44 T 19-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APA12_RS09565 06322fa6e6717db648e3d3820b66b836 375 PRINTS PR00474 Glutamate 5-kinase family signature 85 113 4.2E-44 T 19-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APA12_RS09565 06322fa6e6717db648e3d3820b66b836 375 PRINTS PR00474 Glutamate 5-kinase family signature 51 65 4.2E-44 T 19-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APA12_RS09565 06322fa6e6717db648e3d3820b66b836 375 PRINTS PR00474 Glutamate 5-kinase family signature 218 238 4.2E-44 T 19-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APA12_RS09565 06322fa6e6717db648e3d3820b66b836 375 Gene3D G3DSA:3.40.1160.10 12 263 5.0E-52 T 19-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APA12_RS09565 06322fa6e6717db648e3d3820b66b836 375 PANTHER PTHR11063 6 375 1.3E-109 T 19-04-2016 APA12_RS09565 06322fa6e6717db648e3d3820b66b836 375 PIRSF PIRSF000729 8 375 9.5E-118 T 19-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APA12_RS09565 06322fa6e6717db648e3d3820b66b836 375 Pfam PF01472 PUA domain 285 358 1.0E-20 T 19-04-2016 IPR002478 PUA domain GO:0003723 APA12_RS09565 06322fa6e6717db648e3d3820b66b836 375 Pfam PF00696 Amino acid kinase family 13 242 1.7E-40 T 19-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APA12_RS09565 06322fa6e6717db648e3d3820b66b836 375 SMART SM00359 285 367 1.1E-16 T 19-04-2016 IPR002478 PUA domain GO:0003723 APA12_RS10580 01d08a84dbcdfe085438c93f74c77a42 742 Pfam PF00128 Alpha amylase, catalytic domain 282 359 1.0E-8 T 19-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APA12_RS10580 01d08a84dbcdfe085438c93f74c77a42 742 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 120 736 7.5E-264 T 19-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 APA12_RS10580 01d08a84dbcdfe085438c93f74c77a42 742 PIRSF PIRSF000463 17 742 7.0E-271 T 19-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 APA12_RS10580 01d08a84dbcdfe085438c93f74c77a42 742 Gene3D G3DSA:3.20.20.80 258 625 1.6E-87 T 19-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APA12_RS10580 01d08a84dbcdfe085438c93f74c77a42 742 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 112 740 42.549 T 19-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 APA12_RS10580 01d08a84dbcdfe085438c93f74c77a42 742 SUPERFAMILY SSF51011 637 739 2.88E-33 T 19-04-2016 APA12_RS10580 01d08a84dbcdfe085438c93f74c77a42 742 SUPERFAMILY SSF81296 128 232 2.8E-31 T 19-04-2016 IPR014756 Immunoglobulin E-set APA12_RS10580 01d08a84dbcdfe085438c93f74c77a42 742 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 642 739 3.4E-21 T 19-04-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: REACT_474 APA12_RS10580 01d08a84dbcdfe085438c93f74c77a42 742 SUPERFAMILY SSF81296 27 126 1.84E-17 T 19-04-2016 IPR014756 Immunoglobulin E-set APA12_RS10580 01d08a84dbcdfe085438c93f74c77a42 742 Gene3D G3DSA:2.60.40.10 24 113 2.4E-15 T 19-04-2016 IPR013783 Immunoglobulin-like fold APA12_RS10580 01d08a84dbcdfe085438c93f74c77a42 742 Gene3D G3DSA:2.60.40.10 124 232 7.1E-37 T 19-04-2016 IPR013783 Immunoglobulin-like fold APA12_RS10580 01d08a84dbcdfe085438c93f74c77a42 742 PANTHER PTHR10357 61 739 0.0 T 19-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APA12_RS10580 01d08a84dbcdfe085438c93f74c77a42 742 PANTHER PTHR10357:SF160 61 739 0.0 T 19-04-2016 APA12_RS10580 01d08a84dbcdfe085438c93f74c77a42 742 SMART SM00642 276 609 1.6E-6 T 19-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APA12_RS10580 01d08a84dbcdfe085438c93f74c77a42 742 Gene3D G3DSA:2.60.40.1180 637 739 6.8E-36 T 19-04-2016 IPR013780 Glycosyl hydrolase, all-beta APA12_RS10580 01d08a84dbcdfe085438c93f74c77a42 742 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 36 111 7.4E-7 T 19-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 APA12_RS10580 01d08a84dbcdfe085438c93f74c77a42 742 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 136 219 1.0E-21 T 19-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 APA12_RS10580 01d08a84dbcdfe085438c93f74c77a42 742 SUPERFAMILY SSF51445 196 630 4.49E-107 T 19-04-2016 IPR017853 Glycoside hydrolase superfamily APA12_RS09860 b4182735cee9d88939de03419c2eaad6 301 SUPERFAMILY SSF54713 56 145 1.77E-20 T 19-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APA12_RS09860 b4182735cee9d88939de03419c2eaad6 301 Hamap MF_00050 Elongation factor Ts [tsf]. 1 299 76.831 T 19-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 APA12_RS09860 b4182735cee9d88939de03419c2eaad6 301 Pfam PF00889 Elongation factor TS 71 282 1.0E-65 T 19-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APA12_RS09860 b4182735cee9d88939de03419c2eaad6 301 Gene3D G3DSA:1.10.8.10 3 55 5.6E-29 T 19-04-2016 APA12_RS09860 b4182735cee9d88939de03419c2eaad6 301 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 19-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 APA12_RS09860 b4182735cee9d88939de03419c2eaad6 301 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 298 8.7E-95 T 19-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 APA12_RS09860 b4182735cee9d88939de03419c2eaad6 301 SUPERFAMILY SSF46934 4 55 1.09E-19 T 19-04-2016 IPR009060 UBA-like GO:0005515 APA12_RS09860 b4182735cee9d88939de03419c2eaad6 301 PANTHER PTHR11741 1 300 2.3E-141 T 19-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 APA12_RS09860 b4182735cee9d88939de03419c2eaad6 301 Gene3D G3DSA:3.30.479.20 186 201 9.8E-29 T 19-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APA12_RS09860 b4182735cee9d88939de03419c2eaad6 301 Gene3D G3DSA:3.30.479.20 57 93 9.8E-29 T 19-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APA12_RS09860 b4182735cee9d88939de03419c2eaad6 301 Gene3D G3DSA:3.30.479.20 247 285 9.8E-29 T 19-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APA12_RS09860 b4182735cee9d88939de03419c2eaad6 301 Gene3D G3DSA:1.10.286.20 204 246 1.1E-19 T 19-04-2016 APA12_RS09860 b4182735cee9d88939de03419c2eaad6 301 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 19-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 APA12_RS09860 b4182735cee9d88939de03419c2eaad6 301 SUPERFAMILY SSF54713 149 299 3.01E-45 T 19-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APA12_RS12355 661c74ca737641e2032f8c5c92d62d11 921 Gene3D G3DSA:3.90.199.10 42 224 4.8E-85 T 19-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 APA12_RS12355 661c74ca737641e2032f8c5c92d62d11 921 PANTHER PTHR10169 3 421 0.0 T 19-04-2016 APA12_RS12355 661c74ca737641e2032f8c5c92d62d11 921 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 40 503 2.3E-156 T 19-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS12355 661c74ca737641e2032f8c5c92d62d11 921 PANTHER PTHR10169 805 882 0.0 T 19-04-2016 APA12_RS12355 661c74ca737641e2032f8c5c92d62d11 921 SUPERFAMILY SSF56719 38 519 1.31E-175 T 19-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 APA12_RS12355 661c74ca737641e2032f8c5c92d62d11 921 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 17 905 0.0 T 19-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APA12_RS12355 661c74ca737641e2032f8c5c92d62d11 921 Gene3D G3DSA:3.30.1360.40 244 340 8.5E-40 T 19-04-2016 IPR024946 Arginine repressor C-terminal-like domain APA12_RS12355 661c74ca737641e2032f8c5c92d62d11 921 PANTHER PTHR10169:SF48 448 742 0.0 T 19-04-2016 APA12_RS12355 661c74ca737641e2032f8c5c92d62d11 921 PANTHER PTHR10169:SF48 3 421 0.0 T 19-04-2016 APA12_RS12355 661c74ca737641e2032f8c5c92d62d11 921 Gene3D G3DSA:2.120.10.90 528 743 2.5E-103 T 19-04-2016 APA12_RS12355 661c74ca737641e2032f8c5c92d62d11 921 Gene3D G3DSA:2.120.10.90 806 906 2.5E-103 T 19-04-2016 APA12_RS12355 661c74ca737641e2032f8c5c92d62d11 921 PANTHER PTHR10169:SF48 805 882 0.0 T 19-04-2016 APA12_RS12355 661c74ca737641e2032f8c5c92d62d11 921 SUPERFAMILY SSF101904 531 744 1.7E-86 T 19-04-2016 APA12_RS12355 661c74ca737641e2032f8c5c92d62d11 921 SUPERFAMILY SSF101904 806 917 1.7E-86 T 19-04-2016 APA12_RS12355 661c74ca737641e2032f8c5c92d62d11 921 Gene3D G3DSA:1.10.268.10 371 493 7.4E-39 T 19-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS12355 661c74ca737641e2032f8c5c92d62d11 921 SMART SM00434 19 497 8.8E-277 T 19-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS12355 661c74ca737641e2032f8c5c92d62d11 921 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 646 689 5.6E-9 T 19-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APA12_RS12355 661c74ca737641e2032f8c5c92d62d11 921 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 635 8.6E-7 T 19-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APA12_RS12355 661c74ca737641e2032f8c5c92d62d11 921 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 577 2.5E-9 T 19-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APA12_RS12355 661c74ca737641e2032f8c5c92d62d11 921 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 693 743 2.0E-9 T 19-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APA12_RS12355 661c74ca737641e2032f8c5c92d62d11 921 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 862 907 4.7E-13 T 19-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APA12_RS12355 661c74ca737641e2032f8c5c92d62d11 921 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 809 844 3.1E-7 T 19-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APA12_RS12355 661c74ca737641e2032f8c5c92d62d11 921 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 11 913 27.925 T 19-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APA12_RS12355 661c74ca737641e2032f8c5c92d62d11 921 PANTHER PTHR10169 448 742 0.0 T 19-04-2016 APA12_RS13035 b0d48351f71382f3b282cdbb4e4461c0 186 PANTHER PTHR10302 1 186 5.2E-46 T 19-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APA12_RS13035 b0d48351f71382f3b282cdbb4e4461c0 186 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 186 8.0E-47 T 19-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APA12_RS13035 b0d48351f71382f3b282cdbb4e4461c0 186 Hamap MF_00984 Single-stranded DNA-binding protein. 5 118 33.615 T 19-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APA12_RS13035 b0d48351f71382f3b282cdbb4e4461c0 186 Gene3D G3DSA:2.40.50.140 2 128 4.3E-50 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS13035 b0d48351f71382f3b282cdbb4e4461c0 186 Gene3D G3DSA:2.40.50.140 163 186 4.3E-50 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS13035 b0d48351f71382f3b282cdbb4e4461c0 186 SUPERFAMILY SSF50249 4 186 2.16E-52 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS13035 b0d48351f71382f3b282cdbb4e4461c0 186 Pfam PF00436 Single-strand binding protein family 5 107 7.7E-38 T 19-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 APA12_RS05595 09af076bdef04538df1fdf7f8a1db850 321 PANTHER PTHR18640 1 313 8.1E-88 T 19-04-2016 IPR016833 Putative sodium bile acid cotransporter APA12_RS05595 09af076bdef04538df1fdf7f8a1db850 321 PANTHER PTHR18640:SF9 1 313 8.1E-88 T 19-04-2016 APA12_RS05595 09af076bdef04538df1fdf7f8a1db850 321 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 2 303 1.9E-91 T 19-04-2016 IPR016833 Putative sodium bile acid cotransporter APA12_RS05595 09af076bdef04538df1fdf7f8a1db850 321 PIRSF PIRSF026166 1 320 1.2E-118 T 19-04-2016 IPR016833 Putative sodium bile acid cotransporter APA12_RS06650 d740ec4411d7cb8a8fe4e27fa4926631 118 SUPERFAMILY SSF46785 12 112 5.65E-36 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS06650 d740ec4411d7cb8a8fe4e27fa4926631 118 PANTHER PTHR33204 14 109 4.0E-48 T 19-04-2016 APA12_RS06650 d740ec4411d7cb8a8fe4e27fa4926631 118 Gene3D G3DSA:1.10.10.10 11 116 1.9E-46 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS06650 d740ec4411d7cb8a8fe4e27fa4926631 118 Pfam PF01638 HxlR-like helix-turn-helix 24 111 9.3E-37 T 19-04-2016 IPR002577 Helix-turn-helix, HxlR type APA12_RS06650 d740ec4411d7cb8a8fe4e27fa4926631 118 PANTHER PTHR33204:SF5 14 109 4.0E-48 T 19-04-2016 APA12_RS02210 880a58cdc598937fbb2d80ab0643954a 155 PANTHER PTHR10173 20 134 1.1E-45 T 19-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 APA12_RS02210 880a58cdc598937fbb2d80ab0643954a 155 Pfam PF01641 SelR domain 19 133 1.5E-45 T 19-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 APA12_RS02210 880a58cdc598937fbb2d80ab0643954a 155 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 20 134 4.7E-42 T 19-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 APA12_RS02210 880a58cdc598937fbb2d80ab0643954a 155 SUPERFAMILY SSF51316 18 137 7.32E-52 T 19-04-2016 IPR011057 Mss4-like APA12_RS02210 880a58cdc598937fbb2d80ab0643954a 155 PANTHER PTHR10173:SF18 20 134 1.1E-45 T 19-04-2016 APA12_RS02210 880a58cdc598937fbb2d80ab0643954a 155 Gene3D G3DSA:2.170.150.20 19 137 3.2E-51 T 19-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 APA12_RS04765 e3c38fc2a10d3b0e7311d99e1e640aaa 189 Pfam PF00673 ribosomal L5P family C-terminus 93 187 9.9E-40 T 19-04-2016 IPR031309 Ribosomal protein L5, C-terminal APA12_RS04765 e3c38fc2a10d3b0e7311d99e1e640aaa 189 SUPERFAMILY SSF55282 12 188 2.83E-73 T 19-04-2016 IPR022803 Ribosomal protein L5 domain APA12_RS04765 e3c38fc2a10d3b0e7311d99e1e640aaa 189 Pfam PF00281 Ribosomal protein L5 33 89 4.6E-26 T 19-04-2016 IPR031310 Ribosomal protein L5, N-terminal APA12_RS04765 e3c38fc2a10d3b0e7311d99e1e640aaa 189 Gene3D G3DSA:3.30.1440.10 11 187 2.7E-74 T 19-04-2016 IPR022803 Ribosomal protein L5 domain APA12_RS04765 e3c38fc2a10d3b0e7311d99e1e640aaa 189 PIRSF PIRSF002161 9 189 2.1E-64 T 19-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 APA12_RS04765 e3c38fc2a10d3b0e7311d99e1e640aaa 189 ProSitePatterns PS00358 Ribosomal protein L5 signature. 66 82 - T 19-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04765 e3c38fc2a10d3b0e7311d99e1e640aaa 189 PANTHER PTHR11994 11 187 2.6E-86 T 19-04-2016 APA12_RS04765 e3c38fc2a10d3b0e7311d99e1e640aaa 189 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 10 189 41.93 T 19-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS13550 8a1e56ef25906e47694b534f9e023972 191 SUPERFAMILY SSF55811 13 188 1.76E-31 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APA12_RS13550 8a1e56ef25906e47694b534f9e023972 191 PANTHER PTHR11839 13 191 5.4E-33 T 19-04-2016 APA12_RS13550 8a1e56ef25906e47694b534f9e023972 191 PANTHER PTHR11839:SF9 13 191 5.4E-33 T 19-04-2016 APA12_RS13550 8a1e56ef25906e47694b534f9e023972 191 Gene3D G3DSA:3.90.79.10 13 185 5.7E-39 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APA12_RS04450 025811ef44e418db0483376ae0b47bf0 761 SUPERFAMILY SSF140356 47 147 2.49E-36 T 19-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 APA12_RS04450 025811ef44e418db0483376ae0b47bf0 761 Gene3D G3DSA:3.30.870.10 548 730 3.2E-66 T 19-04-2016 APA12_RS04450 025811ef44e418db0483376ae0b47bf0 761 Pfam PF02503 Polyphosphate kinase middle domain 164 368 2.3E-47 T 19-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 APA12_RS04450 025811ef44e418db0483376ae0b47bf0 761 SUPERFAMILY SSF143724 153 360 3.53E-47 T 19-04-2016 APA12_RS04450 025811ef44e418db0483376ae0b47bf0 761 Gene3D G3DSA:1.20.58.310 159 196 2.8E-45 T 19-04-2016 APA12_RS04450 025811ef44e418db0483376ae0b47bf0 761 Gene3D G3DSA:1.20.58.310 44 126 2.8E-45 T 19-04-2016 APA12_RS04450 025811ef44e418db0483376ae0b47bf0 761 PANTHER PTHR30218:SF0 42 729 3.6E-300 T 19-04-2016 APA12_RS04450 025811ef44e418db0483376ae0b47bf0 761 Pfam PF13090 Polyphosphate kinase C-terminal domain 378 729 4.9E-146 T 19-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 APA12_RS04450 025811ef44e418db0483376ae0b47bf0 761 Gene3D G3DSA:3.30.870.10 363 547 4.1E-72 T 19-04-2016 APA12_RS04450 025811ef44e418db0483376ae0b47bf0 761 Hamap MF_00347 Polyphosphate kinase [ppk]. 47 733 30.379 T 19-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 APA12_RS04450 025811ef44e418db0483376ae0b47bf0 761 PANTHER PTHR30218 42 729 3.6E-300 T 19-04-2016 APA12_RS04450 025811ef44e418db0483376ae0b47bf0 761 SUPERFAMILY SSF56024 364 545 3.34E-54 T 19-04-2016 APA12_RS04450 025811ef44e418db0483376ae0b47bf0 761 PIRSF PIRSF015589 28 745 6.1E-252 T 19-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 APA12_RS04450 025811ef44e418db0483376ae0b47bf0 761 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 49 730 2.0E-272 T 19-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 APA12_RS04450 025811ef44e418db0483376ae0b47bf0 761 Pfam PF13089 Polyphosphate kinase N-terminal domain 50 154 2.1E-36 T 19-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 APA12_RS04450 025811ef44e418db0483376ae0b47bf0 761 SUPERFAMILY SSF56024 548 730 6.28E-64 T 19-04-2016 APA12_RS08870 1915c5bfddeb6ec52627eda9757f2ce3 356 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 103 122 - T 19-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 APA12_RS08870 1915c5bfddeb6ec52627eda9757f2ce3 356 Pfam PF01207 Dihydrouridine synthase (Dus) 22 323 6.7E-108 T 19-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APA12_RS08870 1915c5bfddeb6ec52627eda9757f2ce3 356 PIRSF PIRSF006621 11 339 6.4E-112 T 19-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APA12_RS08870 1915c5bfddeb6ec52627eda9757f2ce3 356 PANTHER PTHR11082 7 330 3.0E-132 T 19-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APA12_RS08870 1915c5bfddeb6ec52627eda9757f2ce3 356 PANTHER PTHR11082:SF25 7 330 3.0E-132 T 19-04-2016 APA12_RS08870 1915c5bfddeb6ec52627eda9757f2ce3 356 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 13 328 4.2E-119 T 19-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 APA12_RS08870 1915c5bfddeb6ec52627eda9757f2ce3 356 Gene3D G3DSA:3.20.20.70 17 254 2.1E-82 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS08870 1915c5bfddeb6ec52627eda9757f2ce3 356 Gene3D G3DSA:1.10.1200.80 264 332 2.3E-19 T 19-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 APA12_RS08870 1915c5bfddeb6ec52627eda9757f2ce3 356 SUPERFAMILY SSF51395 20 328 1.17E-90 T 19-04-2016 APA12_RS07720 8a953a9867234c44544dd819d9ddf908 349 PANTHER PTHR30367 14 347 1.5E-58 T 19-04-2016 APA12_RS07720 8a953a9867234c44544dd819d9ddf908 349 Gene3D G3DSA:2.40.50.100 51 83 4.0E-16 T 19-04-2016 APA12_RS07720 8a953a9867234c44544dd819d9ddf908 349 Gene3D G3DSA:2.40.50.100 210 242 4.0E-16 T 19-04-2016 APA12_RS07720 8a953a9867234c44544dd819d9ddf908 349 Pfam PF13437 HlyD family secretion protein 212 295 2.2E-10 T 19-04-2016 APA12_RS07720 8a953a9867234c44544dd819d9ddf908 349 Pfam PF13533 Biotin-lipoyl like 51 97 9.3E-14 T 19-04-2016 APA12_RS07720 8a953a9867234c44544dd819d9ddf908 349 SUPERFAMILY SSF111369 49 123 2.09E-10 T 19-04-2016 APA12_RS07720 8a953a9867234c44544dd819d9ddf908 349 SUPERFAMILY SSF111369 188 301 1.96E-8 T 19-04-2016 APA12_RS05870 533545817e7a5d5fc2b1293dc1d7b601 626 Gene3D G3DSA:3.40.50.300 427 614 8.2E-72 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05870 533545817e7a5d5fc2b1293dc1d7b601 626 SUPERFAMILY SSF52540 444 614 7.85E-33 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05870 533545817e7a5d5fc2b1293dc1d7b601 626 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 433 610 2.4E-69 T 19-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 APA12_RS05870 533545817e7a5d5fc2b1293dc1d7b601 626 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 445 616 35.19 T 19-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 APA12_RS05870 533545817e7a5d5fc2b1293dc1d7b601 626 Gene3D G3DSA:2.40.30.10 226 337 2.8E-17 T 19-04-2016 APA12_RS05870 533545817e7a5d5fc2b1293dc1d7b601 626 SUPERFAMILY SSF52540 14 237 6.0E-51 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05870 533545817e7a5d5fc2b1293dc1d7b601 626 SUPERFAMILY SSF50465 316 415 4.8E-15 T 19-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal APA12_RS05870 533545817e7a5d5fc2b1293dc1d7b601 626 PRINTS PR00315 GTP-binding elongation factor signature 92 102 5.9E-16 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APA12_RS05870 533545817e7a5d5fc2b1293dc1d7b601 626 PRINTS PR00315 GTP-binding elongation factor signature 72 80 5.9E-16 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APA12_RS05870 533545817e7a5d5fc2b1293dc1d7b601 626 PRINTS PR00315 GTP-binding elongation factor signature 145 154 5.9E-16 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APA12_RS05870 533545817e7a5d5fc2b1293dc1d7b601 626 PRINTS PR00315 GTP-binding elongation factor signature 108 119 5.9E-16 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APA12_RS05870 533545817e7a5d5fc2b1293dc1d7b601 626 PRINTS PR00315 GTP-binding elongation factor signature 14 27 5.9E-16 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APA12_RS05870 533545817e7a5d5fc2b1293dc1d7b601 626 Pfam PF01583 Adenylylsulphate kinase 446 599 1.0E-62 T 19-04-2016 APA12_RS05870 533545817e7a5d5fc2b1293dc1d7b601 626 PANTHER PTHR11055 431 614 8.7E-89 T 19-04-2016 APA12_RS05870 533545817e7a5d5fc2b1293dc1d7b601 626 SUPERFAMILY SSF50447 219 309 4.37E-14 T 19-04-2016 IPR009000 Translation protein, beta-barrel domain APA12_RS05870 533545817e7a5d5fc2b1293dc1d7b601 626 Gene3D G3DSA:3.40.50.300 8 216 1.4E-58 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05870 533545817e7a5d5fc2b1293dc1d7b601 626 Pfam PF00009 Elongation factor Tu GTP binding domain 15 208 6.2E-40 T 19-04-2016 APA12_RS05870 533545817e7a5d5fc2b1293dc1d7b601 626 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 16 412 3.0E-102 T 19-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 APA12_RS05870 533545817e7a5d5fc2b1293dc1d7b601 626 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 195 2.2E-14 T 19-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APA12_RS05870 533545817e7a5d5fc2b1293dc1d7b601 626 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 65 80 - T 19-04-2016 IPR031157 Tr-type G domain, conserved site APA12_RS09625 634aae37b5f9b4a4bded87ee2beef144 364 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 27 362 23.358 T 19-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APA12_RS09625 634aae37b5f9b4a4bded87ee2beef144 364 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 72 84 2.6E-4 T 19-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APA12_RS09625 634aae37b5f9b4a4bded87ee2beef144 364 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 39 364 4.9E-117 T 19-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APA12_RS09625 634aae37b5f9b4a4bded87ee2beef144 364 ProSitePatterns PS01348 MraY family signature 2. 193 204 - T 19-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APA12_RS09625 634aae37b5f9b4a4bded87ee2beef144 364 ProSitePatterns PS01347 MraY family signature 1. 72 84 - T 19-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APA12_RS09625 634aae37b5f9b4a4bded87ee2beef144 364 PANTHER PTHR22926 2 364 9.5E-146 T 19-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APA12_RS09625 634aae37b5f9b4a4bded87ee2beef144 364 PANTHER PTHR22926:SF5 2 364 9.5E-146 T 19-04-2016 APA12_RS09625 634aae37b5f9b4a4bded87ee2beef144 364 Pfam PF00953 Glycosyl transferase family 4 103 288 1.7E-36 T 19-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APA12_RS06145 d264807a17f24b7ad4e57a87e91481b2 451 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 19-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site APA12_RS06145 d264807a17f24b7ad4e57a87e91481b2 451 SUPERFAMILY SSF52518 130 320 5.4E-68 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS06145 d264807a17f24b7ad4e57a87e91481b2 451 PANTHER PTHR11624 33 66 1.0E-174 T 19-04-2016 IPR033247 Transketolase family APA12_RS06145 d264807a17f24b7ad4e57a87e91481b2 451 PANTHER PTHR11624 118 451 1.0E-174 T 19-04-2016 IPR033247 Transketolase family APA12_RS06145 d264807a17f24b7ad4e57a87e91481b2 451 SUPERFAMILY SSF51230 1 89 1.31E-28 T 19-04-2016 IPR011053 Single hybrid motif APA12_RS06145 d264807a17f24b7ad4e57a87e91481b2 451 Pfam PF02779 Transketolase, pyrimidine binding domain 130 305 8.4E-49 T 19-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APA12_RS06145 d264807a17f24b7ad4e57a87e91481b2 451 Gene3D G3DSA:3.40.50.920 322 449 1.1E-45 T 19-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APA12_RS06145 d264807a17f24b7ad4e57a87e91481b2 451 Pfam PF02780 Transketolase, C-terminal domain 321 443 1.4E-42 T 19-04-2016 IPR033248 Transketolase, C-terminal domain APA12_RS06145 d264807a17f24b7ad4e57a87e91481b2 451 SUPERFAMILY SSF52922 318 451 2.09E-43 T 19-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APA12_RS06145 d264807a17f24b7ad4e57a87e91481b2 451 Gene3D G3DSA:3.40.50.970 128 321 2.0E-94 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS06145 d264807a17f24b7ad4e57a87e91481b2 451 Gene3D G3DSA:2.40.50.100 1 91 6.1E-35 T 19-04-2016 APA12_RS06145 d264807a17f24b7ad4e57a87e91481b2 451 SMART SM00861 131 306 6.8E-63 T 19-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APA12_RS06145 d264807a17f24b7ad4e57a87e91481b2 451 Pfam PF00364 Biotin-requiring enzyme 4 77 6.8E-20 T 19-04-2016 IPR000089 Biotin/lipoyl attachment APA12_RS03055 9f374813be7d509caf14249eff55781f 393 Gene3D G3DSA:1.20.1510.10 105 294 1.3E-51 T 19-04-2016 IPR027469 Cation efflux protein transmembrane domain APA12_RS03055 9f374813be7d509caf14249eff55781f 393 SUPERFAMILY SSF161111 103 298 5.49E-51 T 19-04-2016 APA12_RS03055 9f374813be7d509caf14249eff55781f 393 PANTHER PTHR11562:SF17 52 387 4.8E-86 T 19-04-2016 APA12_RS03055 9f374813be7d509caf14249eff55781f 393 Pfam PF01545 Cation efflux family 108 294 5.8E-41 T 19-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 APA12_RS03055 9f374813be7d509caf14249eff55781f 393 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 104 379 1.1E-75 T 19-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 APA12_RS03055 9f374813be7d509caf14249eff55781f 393 SUPERFAMILY SSF160240 308 378 1.96E-5 T 19-04-2016 APA12_RS03055 9f374813be7d509caf14249eff55781f 393 PANTHER PTHR11562 52 387 4.8E-86 T 19-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 APA12_RS00150 a07f2ee967dd4a11366447d712cdfac9 157 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 96 109 - T 19-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 APA12_RS00150 a07f2ee967dd4a11366447d712cdfac9 157 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 20 135 2.6E-32 T 19-04-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 UniPathway: UPA00223 APA12_RS00150 a07f2ee967dd4a11366447d712cdfac9 157 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 19 133 2.4E-24 T 19-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 APA12_RS00150 a07f2ee967dd4a11366447d712cdfac9 157 PANTHER PTHR10978:SF6 19 116 4.1E-26 T 19-04-2016 APA12_RS00150 a07f2ee967dd4a11366447d712cdfac9 157 Gene3D G3DSA:1.20.1300.10 20 137 1.5E-35 T 19-04-2016 APA12_RS00150 a07f2ee967dd4a11366447d712cdfac9 157 SUPERFAMILY SSF81343 19 137 8.28E-29 T 19-04-2016 APA12_RS00150 a07f2ee967dd4a11366447d712cdfac9 157 PANTHER PTHR10978 19 116 4.1E-26 T 19-04-2016 APA12_RS01990 636e4f765f978e3b3353609d2b74a797 675 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 25 648 2.1E-233 T 19-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APA12_RS01990 636e4f765f978e3b3353609d2b74a797 675 Gene3D G3DSA:3.40.50.970 357 518 2.2E-34 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS01990 636e4f765f978e3b3353609d2b74a797 675 Gene3D G3DSA:3.40.50.920 519 655 3.0E-28 T 19-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APA12_RS01990 636e4f765f978e3b3353609d2b74a797 675 Pfam PF02779 Transketolase, pyrimidine binding domain 342 501 2.0E-37 T 19-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APA12_RS01990 636e4f765f978e3b3353609d2b74a797 675 SUPERFAMILY SSF52922 513 656 2.62E-27 T 19-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APA12_RS01990 636e4f765f978e3b3353609d2b74a797 675 ProSitePatterns PS00802 Transketolase signature 2. 447 463 - T 19-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APA12_RS01990 636e4f765f978e3b3353609d2b74a797 675 PANTHER PTHR11624:SF20 262 668 1.1E-297 T 19-04-2016 APA12_RS01990 636e4f765f978e3b3353609d2b74a797 675 PANTHER PTHR11624:SF20 35 238 1.1E-297 T 19-04-2016 APA12_RS01990 636e4f765f978e3b3353609d2b74a797 675 ProSitePatterns PS00801 Transketolase signature 1. 47 66 - T 19-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APA12_RS01990 636e4f765f978e3b3353609d2b74a797 675 SUPERFAMILY SSF52518 340 525 1.31E-57 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS01990 636e4f765f978e3b3353609d2b74a797 675 SUPERFAMILY SSF52518 13 219 2.11E-76 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS01990 636e4f765f978e3b3353609d2b74a797 675 SUPERFAMILY SSF52518 264 403 2.11E-76 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS01990 636e4f765f978e3b3353609d2b74a797 675 SMART SM00861 341 506 3.7E-65 T 19-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APA12_RS01990 636e4f765f978e3b3353609d2b74a797 675 Pfam PF02780 Transketolase, C-terminal domain 536 648 7.3E-22 T 19-04-2016 IPR033248 Transketolase, C-terminal domain APA12_RS01990 636e4f765f978e3b3353609d2b74a797 675 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 21 657 44.184 T 19-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APA12_RS01990 636e4f765f978e3b3353609d2b74a797 675 Gene3D G3DSA:3.40.50.970 35 221 7.3E-73 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS01990 636e4f765f978e3b3353609d2b74a797 675 Gene3D G3DSA:3.40.50.970 263 356 7.3E-73 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS01990 636e4f765f978e3b3353609d2b74a797 675 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 22 304 3.1E-114 T 19-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APA12_RS01990 636e4f765f978e3b3353609d2b74a797 675 PANTHER PTHR11624 262 668 1.1E-297 T 19-04-2016 IPR033247 Transketolase family APA12_RS01990 636e4f765f978e3b3353609d2b74a797 675 PANTHER PTHR11624 35 238 1.1E-297 T 19-04-2016 IPR033247 Transketolase family APA12_RS01435 1136f345586fbcedddd8bddc25096576 326 PANTHER PTHR30448 2 310 4.8E-94 T 19-04-2016 APA12_RS01435 1136f345586fbcedddd8bddc25096576 326 PANTHER PTHR30448:SF0 2 310 4.8E-94 T 19-04-2016 APA12_RS01435 1136f345586fbcedddd8bddc25096576 326 Pfam PF03668 P-loop ATPase protein family 13 277 6.3E-71 T 19-04-2016 IPR005337 RapZ-like family GO:0005524 APA12_RS01435 1136f345586fbcedddd8bddc25096576 326 SUPERFAMILY SSF52540 10 160 4.24E-12 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS01435 1136f345586fbcedddd8bddc25096576 326 PIRSF PIRSF005052 11 286 1.5E-84 T 19-04-2016 IPR005337 RapZ-like family GO:0005524 APA12_RS01435 1136f345586fbcedddd8bddc25096576 326 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 11 302 37.198 T 19-04-2016 IPR005337 RapZ-like family GO:0005524 APA12_RS01435 1136f345586fbcedddd8bddc25096576 326 Gene3D G3DSA:3.40.50.300 7 160 7.2E-12 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS13615 3ac0ae332472868ab85e9421f05555bc 269 Pfam PF09250 Bifunctional DNA primase/polymerase, N-terminal 22 164 7.7E-22 T 19-04-2016 IPR015330 DNA primase/polymerase, bifunctional, N-terminal APA12_RS13615 3ac0ae332472868ab85e9421f05555bc 269 SUPERFAMILY SSF56747 17 194 2.68E-23 T 19-04-2016 APA12_RS13615 3ac0ae332472868ab85e9421f05555bc 269 SMART SM00943 20 165 5.2E-29 T 19-04-2016 IPR015330 DNA primase/polymerase, bifunctional, N-terminal APA12_RS09035 fccafc48e8fec0614e32b368b53defc3 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 19-04-2016 IPR019844 Cold-shock conserved site APA12_RS09035 fccafc48e8fec0614e32b368b53defc3 67 PIRSF PIRSF002599 1 67 2.5E-22 T 19-04-2016 IPR012156 Cold shock, CspA GO:0003676 APA12_RS09035 fccafc48e8fec0614e32b368b53defc3 67 Gene3D G3DSA:2.40.50.140 1 65 2.1E-28 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS09035 fccafc48e8fec0614e32b368b53defc3 67 PRINTS PR00050 Cold shock protein signature 4 19 3.9E-14 T 19-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APA12_RS09035 fccafc48e8fec0614e32b368b53defc3 67 PRINTS PR00050 Cold shock protein signature 25 34 3.9E-14 T 19-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APA12_RS09035 fccafc48e8fec0614e32b368b53defc3 67 PRINTS PR00050 Cold shock protein signature 40 58 3.9E-14 T 19-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APA12_RS09035 fccafc48e8fec0614e32b368b53defc3 67 SUPERFAMILY SSF50249 1 65 1.56E-22 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS09035 fccafc48e8fec0614e32b368b53defc3 67 SMART SM00357 3 67 2.9E-27 T 19-04-2016 IPR011129 Cold shock protein GO:0003676 APA12_RS09035 fccafc48e8fec0614e32b368b53defc3 67 PANTHER PTHR11544 1 61 1.4E-24 T 19-04-2016 APA12_RS09035 fccafc48e8fec0614e32b368b53defc3 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 2.9E-26 T 19-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APA12_RS02540 d9bbdc6af400039cc30974660de5679f 680 SUPERFAMILY SSF51294 333 468 7.32E-11 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS02540 d9bbdc6af400039cc30974660de5679f 680 Gene3D G3DSA:2.170.16.10 331 486 1.2E-5 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS02540 d9bbdc6af400039cc30974660de5679f 680 Pfam PF13403 Hint domain 332 471 8.0E-41 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS07965 b156b6e18511d3935bb8120f74fd163b 210 SUPERFAMILY SSF46689 3 86 4.0E-15 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS07965 b156b6e18511d3935bb8120f74fd163b 210 PANTHER PTHR30055 1 199 1.9E-53 T 19-04-2016 APA12_RS07965 b156b6e18511d3935bb8120f74fd163b 210 PANTHER PTHR30055:SF34 1 199 1.9E-53 T 19-04-2016 APA12_RS07965 b156b6e18511d3935bb8120f74fd163b 210 SUPERFAMILY SSF48498 84 198 3.5E-23 T 19-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APA12_RS07965 b156b6e18511d3935bb8120f74fd163b 210 Gene3D G3DSA:1.10.10.60 1 69 4.0E-23 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS07965 b156b6e18511d3935bb8120f74fd163b 210 Gene3D G3DSA:1.10.357.10 70 199 4.6E-37 T 19-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APA12_RS07965 b156b6e18511d3935bb8120f74fd163b 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 9.5E-9 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APA12_RS00565 e5cd66bd9e3a2093665f878e13c739bd 544 Gene3D G3DSA:3.40.50.10380 10 262 6.4E-100 T 19-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 APA12_RS00565 e5cd66bd9e3a2093665f878e13c739bd 544 PRINTS PR00072 Malic enzyme signature 81 105 3.3E-60 T 19-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 APA12_RS00565 e5cd66bd9e3a2093665f878e13c739bd 544 PRINTS PR00072 Malic enzyme signature 292 308 3.3E-60 T 19-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 APA12_RS00565 e5cd66bd9e3a2093665f878e13c739bd 544 PRINTS PR00072 Malic enzyme signature 236 254 3.3E-60 T 19-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 APA12_RS00565 e5cd66bd9e3a2093665f878e13c739bd 544 PRINTS PR00072 Malic enzyme signature 393 409 3.3E-60 T 19-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 APA12_RS00565 e5cd66bd9e3a2093665f878e13c739bd 544 PRINTS PR00072 Malic enzyme signature 141 170 3.3E-60 T 19-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 APA12_RS00565 e5cd66bd9e3a2093665f878e13c739bd 544 PRINTS PR00072 Malic enzyme signature 177 199 3.3E-60 T 19-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 APA12_RS00565 e5cd66bd9e3a2093665f878e13c739bd 544 PRINTS PR00072 Malic enzyme signature 261 277 3.3E-60 T 19-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 APA12_RS00565 e5cd66bd9e3a2093665f878e13c739bd 544 PANTHER PTHR23406 5 542 1.3E-248 T 19-04-2016 APA12_RS00565 e5cd66bd9e3a2093665f878e13c739bd 544 PIRSF PIRSF000106 2 544 5.2E-196 T 19-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 APA12_RS00565 e5cd66bd9e3a2093665f878e13c739bd 544 Gene3D G3DSA:3.40.50.720 263 543 1.3E-98 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS00565 e5cd66bd9e3a2093665f878e13c739bd 544 SUPERFAMILY SSF53223 7 264 4.89E-90 T 19-04-2016 APA12_RS00565 e5cd66bd9e3a2093665f878e13c739bd 544 SMART SM00919 265 516 3.1E-92 T 19-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 APA12_RS00565 e5cd66bd9e3a2093665f878e13c739bd 544 SMART SM01274 75 255 2.4E-78 T 19-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 APA12_RS00565 e5cd66bd9e3a2093665f878e13c739bd 544 Pfam PF00390 Malic enzyme, N-terminal domain 76 254 3.1E-61 T 19-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 APA12_RS00565 e5cd66bd9e3a2093665f878e13c739bd 544 SUPERFAMILY SSF51735 265 542 3.23E-87 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS00565 e5cd66bd9e3a2093665f878e13c739bd 544 PANTHER PTHR23406:SF22 5 542 1.3E-248 T 19-04-2016 APA12_RS00565 e5cd66bd9e3a2093665f878e13c739bd 544 Pfam PF03949 Malic enzyme, NAD binding domain 265 513 1.2E-85 T 19-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 APA12_RS01820 702df4370171c191a8ffd0da2b920b57 662 SUPERFAMILY SSF56801 12 645 4.71E-160 T 19-04-2016 APA12_RS01820 702df4370171c191a8ffd0da2b920b57 662 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 25 640 1.1E-241 T 19-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 APA12_RS01820 702df4370171c191a8ffd0da2b920b57 662 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 26 80 4.1E-14 T 19-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 APA12_RS01820 702df4370171c191a8ffd0da2b920b57 662 Pfam PF00501 AMP-binding enzyme 86 522 1.1E-88 T 19-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APA12_RS01820 702df4370171c191a8ffd0da2b920b57 662 Gene3D G3DSA:2.30.38.10 439 516 4.4E-10 T 19-04-2016 APA12_RS01820 702df4370171c191a8ffd0da2b920b57 662 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 19-04-2016 IPR020845 AMP-binding, conserved site APA12_RS01820 702df4370171c191a8ffd0da2b920b57 662 Gene3D G3DSA:3.30.300.30 518 638 6.0E-22 T 19-04-2016 APA12_RS01820 702df4370171c191a8ffd0da2b920b57 662 Gene3D G3DSA:3.40.50.980 267 422 1.1E-28 T 19-04-2016 APA12_RS01820 702df4370171c191a8ffd0da2b920b57 662 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 608 3.1E-16 T 19-04-2016 IPR025110 AMP-binding enzyme C-terminal domain APA12_RS01820 702df4370171c191a8ffd0da2b920b57 662 Gene3D G3DSA:3.40.50.980 80 266 1.0E-36 T 19-04-2016 APA12_RS01820 702df4370171c191a8ffd0da2b920b57 662 PANTHER PTHR24095 21 640 1.3E-243 T 19-04-2016 APA12_RS01820 702df4370171c191a8ffd0da2b920b57 662 PANTHER PTHR24095:SF178 21 640 1.3E-243 T 19-04-2016 APA12_RS06980 6ad0746cda6bd7b11f61c5dd22bad90d 593 PANTHER PTHR21000 1 593 0.0 T 19-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APA12_RS06980 6ad0746cda6bd7b11f61c5dd22bad90d 593 PANTHER PTHR21000:SF2 1 593 0.0 T 19-04-2016 APA12_RS06980 6ad0746cda6bd7b11f61c5dd22bad90d 593 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 138 148 - T 19-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APA12_RS06980 6ad0746cda6bd7b11f61c5dd22bad90d 593 Pfam PF00920 Dehydratase family 55 574 1.1E-177 T 19-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APA12_RS06980 6ad0746cda6bd7b11f61c5dd22bad90d 593 SUPERFAMILY SSF143975 13 387 9.94E-128 T 19-04-2016 APA12_RS06980 6ad0746cda6bd7b11f61c5dd22bad90d 593 SUPERFAMILY SSF52016 395 580 4.63E-56 T 19-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APA12_RS07075 7e5b596074ece1ccf0703216c69d2bd8 383 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 213 2.1E-11 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 APA12_RS07075 7e5b596074ece1ccf0703216c69d2bd8 383 Gene3D G3DSA:1.10.540.10 7 97 7.8E-10 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 APA12_RS07075 7e5b596074ece1ccf0703216c69d2bd8 383 SUPERFAMILY SSF47203 244 382 1.21E-17 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APA12_RS07075 7e5b596074ece1ccf0703216c69d2bd8 383 Gene3D G3DSA:1.20.140.10 216 382 7.0E-30 T 19-04-2016 APA12_RS07075 7e5b596074ece1ccf0703216c69d2bd8 383 PANTHER PTHR10909 13 364 8.6E-33 T 19-04-2016 APA12_RS07075 7e5b596074ece1ccf0703216c69d2bd8 383 Gene3D G3DSA:2.40.110.10 131 215 3.3E-27 T 19-04-2016 APA12_RS07075 7e5b596074ece1ccf0703216c69d2bd8 383 SUPERFAMILY SSF56645 14 222 4.97E-36 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 APA12_RS07075 7e5b596074ece1ccf0703216c69d2bd8 383 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 247 369 1.1E-12 T 19-04-2016 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain APA12_RS07075 7e5b596074ece1ccf0703216c69d2bd8 383 PANTHER PTHR10909:SF152 13 364 8.6E-33 T 19-04-2016 APA12_RS11415 321e713563e09207633fcc94ab3122fb 204 Gene3D G3DSA:3.40.50.1240 6 163 2.4E-32 T 19-04-2016 IPR029033 Histidine phosphatase superfamily APA12_RS11415 321e713563e09207633fcc94ab3122fb 204 PANTHER PTHR23029:SF1 50 153 1.2E-25 T 19-04-2016 APA12_RS11415 321e713563e09207633fcc94ab3122fb 204 PANTHER PTHR23029 50 153 1.2E-25 T 19-04-2016 APA12_RS11415 321e713563e09207633fcc94ab3122fb 204 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 163 9.1E-32 T 19-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APA12_RS11415 321e713563e09207633fcc94ab3122fb 204 SMART SM00855 5 153 4.9E-9 T 19-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APA12_RS11415 321e713563e09207633fcc94ab3122fb 204 SUPERFAMILY SSF53254 6 165 3.64E-31 T 19-04-2016 IPR029033 Histidine phosphatase superfamily APA12_RS11725 0f6f6298d6d2772a3ee06fe776b1c9ef 190 SMART SM00248 96 125 100.0 T 19-04-2016 IPR002110 Ankyrin repeat GO:0005515 APA12_RS11725 0f6f6298d6d2772a3ee06fe776b1c9ef 190 SMART SM00248 29 59 470.0 T 19-04-2016 IPR002110 Ankyrin repeat GO:0005515 APA12_RS11725 0f6f6298d6d2772a3ee06fe776b1c9ef 190 SMART SM00248 63 92 1.1E-4 T 19-04-2016 IPR002110 Ankyrin repeat GO:0005515 APA12_RS11725 0f6f6298d6d2772a3ee06fe776b1c9ef 190 SMART SM00248 129 158 0.0041 T 19-04-2016 IPR002110 Ankyrin repeat GO:0005515 APA12_RS11725 0f6f6298d6d2772a3ee06fe776b1c9ef 190 Pfam PF12796 Ankyrin repeats (3 copies) 32 94 1.7E-8 T 19-04-2016 IPR020683 Ankyrin repeat-containing domain APA12_RS11725 0f6f6298d6d2772a3ee06fe776b1c9ef 190 SUPERFAMILY SSF48403 35 182 1.05E-37 T 19-04-2016 IPR020683 Ankyrin repeat-containing domain APA12_RS11725 0f6f6298d6d2772a3ee06fe776b1c9ef 190 Gene3D G3DSA:1.25.40.20 37 185 2.3E-41 T 19-04-2016 IPR020683 Ankyrin repeat-containing domain APA12_RS11725 0f6f6298d6d2772a3ee06fe776b1c9ef 190 PANTHER PTHR24188 35 182 7.5E-37 T 19-04-2016 APA12_RS11725 0f6f6298d6d2772a3ee06fe776b1c9ef 190 Pfam PF13857 Ankyrin repeats (many copies) 116 170 1.9E-7 T 19-04-2016 APA12_RS05225 82bc9393b2f3201c1d394ec6e320c86b 567 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 91 479 3.0E-61 T 19-04-2016 IPR000914 Solute-binding protein family 5 domain APA12_RS05225 82bc9393b2f3201c1d394ec6e320c86b 567 Gene3D G3DSA:3.10.105.10 324 535 6.5E-34 T 19-04-2016 APA12_RS05225 82bc9393b2f3201c1d394ec6e320c86b 567 Gene3D G3DSA:3.40.190.10 223 323 3.7E-21 T 19-04-2016 APA12_RS05225 82bc9393b2f3201c1d394ec6e320c86b 567 SUPERFAMILY SSF53850 42 566 4.81E-94 T 19-04-2016 APA12_RS05225 82bc9393b2f3201c1d394ec6e320c86b 567 PANTHER PTHR30290 42 567 4.1E-83 T 19-04-2016 APA12_RS05225 82bc9393b2f3201c1d394ec6e320c86b 567 PIRSF PIRSF002741 3 566 1.5E-56 T 19-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 APA12_RS05225 82bc9393b2f3201c1d394ec6e320c86b 567 Gene3D G3DSA:3.90.76.10 55 222 1.6E-31 T 19-04-2016 APA12_RS12525 a2e1abc9a3db746fee8ef08429eaea63 270 SUPERFAMILY SSF54506 4 130 1.15E-42 T 19-04-2016 APA12_RS12525 a2e1abc9a3db746fee8ef08429eaea63 270 Pfam PF01678 Diaminopimelate epimerase 147 256 3.1E-22 T 19-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 APA12_RS12525 a2e1abc9a3db746fee8ef08429eaea63 270 Pfam PF01678 Diaminopimelate epimerase 5 123 1.7E-25 T 19-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 APA12_RS12525 a2e1abc9a3db746fee8ef08429eaea63 270 SUPERFAMILY SSF54506 135 264 5.81E-38 T 19-04-2016 APA12_RS12525 a2e1abc9a3db746fee8ef08429eaea63 270 Gene3D G3DSA:3.10.310.10 4 120 4.1E-41 T 19-04-2016 APA12_RS12525 a2e1abc9a3db746fee8ef08429eaea63 270 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 263 9.4E-70 T 19-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 APA12_RS12525 a2e1abc9a3db746fee8ef08429eaea63 270 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 19-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 APA12_RS12525 a2e1abc9a3db746fee8ef08429eaea63 270 Gene3D G3DSA:3.10.310.10 121 253 1.7E-40 T 19-04-2016 APA12_RS12525 a2e1abc9a3db746fee8ef08429eaea63 270 PANTHER PTHR31689 5 269 4.6E-92 T 19-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 APA12_RS12525 a2e1abc9a3db746fee8ef08429eaea63 270 PANTHER PTHR31689:SF0 5 269 4.6E-92 T 19-04-2016 APA12_RS12525 a2e1abc9a3db746fee8ef08429eaea63 270 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 265 32.59 T 19-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 APA12_RS05400 6ae1d6121976ae3e888e82f7e148902c 109 Gene3D G3DSA:1.20.59.10 8 97 6.3E-22 T 19-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 APA12_RS05400 6ae1d6121976ae3e888e82f7e148902c 109 Pfam PF01817 Chorismate mutase type II 19 94 1.4E-18 T 19-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 APA12_RS05400 6ae1d6121976ae3e888e82f7e148902c 109 SUPERFAMILY SSF48600 11 98 1.98E-26 T 19-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 APA12_RS05400 6ae1d6121976ae3e888e82f7e148902c 109 SMART SM00830 19 99 2.4E-25 T 19-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 APA12_RS05400 6ae1d6121976ae3e888e82f7e148902c 109 TIGRFAM TIGR01795 CM_mono_cladeE: chorismate mutase 14 102 8.2E-45 T 19-04-2016 IPR010951 Chorismate mutase, bacteria APA12_RS03775 7b3632829f58dd6bec71b36c46a073c4 387 SUPERFAMILY SSF56925 234 251 6.54E-13 T 19-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APA12_RS03775 7b3632829f58dd6bec71b36c46a073c4 387 SUPERFAMILY SSF56925 34 204 6.54E-13 T 19-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APA12_RS03775 7b3632829f58dd6bec71b36c46a073c4 387 PANTHER PTHR30128 255 387 2.6E-25 T 19-04-2016 APA12_RS03775 7b3632829f58dd6bec71b36c46a073c4 387 Gene3D G3DSA:3.30.1330.60 277 386 1.5E-25 T 19-04-2016 IPR006665 OmpA-like domain APA12_RS03775 7b3632829f58dd6bec71b36c46a073c4 387 Pfam PF00691 OmpA family 278 380 2.5E-15 T 19-04-2016 IPR006665 OmpA-like domain APA12_RS03775 7b3632829f58dd6bec71b36c46a073c4 387 SUPERFAMILY SSF103088 252 385 1.1E-26 T 19-04-2016 IPR006665 OmpA-like domain APA12_RS03775 7b3632829f58dd6bec71b36c46a073c4 387 Gene3D G3DSA:2.40.160.20 21 269 5.1E-15 T 19-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APA12_RS12265 e963e9534142aeaff1bf8ab27422a04c 324 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 311 1.7E-52 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS12265 e963e9534142aeaff1bf8ab27422a04c 324 PANTHER PTHR10366:SF77 2 317 1.2E-137 T 19-04-2016 APA12_RS12265 e963e9534142aeaff1bf8ab27422a04c 324 PANTHER PTHR10366 2 317 1.2E-137 T 19-04-2016 APA12_RS12265 e963e9534142aeaff1bf8ab27422a04c 324 SUPERFAMILY SSF51735 3 318 3.15E-84 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS12265 e963e9534142aeaff1bf8ab27422a04c 324 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 2.0E-21 T 19-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 APA12_RS12265 e963e9534142aeaff1bf8ab27422a04c 324 PRINTS PR01713 Nucleotide sugar epimerase signature 243 258 2.0E-21 T 19-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 APA12_RS12265 e963e9534142aeaff1bf8ab27422a04c 324 PRINTS PR01713 Nucleotide sugar epimerase signature 282 299 2.0E-21 T 19-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 APA12_RS12265 e963e9534142aeaff1bf8ab27422a04c 324 PRINTS PR01713 Nucleotide sugar epimerase signature 218 233 2.0E-21 T 19-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 APA12_RS12265 e963e9534142aeaff1bf8ab27422a04c 324 Gene3D G3DSA:3.90.25.10 186 318 1.8E-31 T 19-04-2016 APA12_RS12265 e963e9534142aeaff1bf8ab27422a04c 324 Gene3D G3DSA:3.40.50.720 3 185 1.1E-48 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS09590 f34a498dadfd2a6dba43deb5fa586921 352 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 192 204 - T 19-04-2016 IPR033140 Lipase, GDXG, putative serine active site APA12_RS09590 f34a498dadfd2a6dba43deb5fa586921 352 Gene3D G3DSA:3.40.50.1820 65 350 5.4E-82 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS09590 f34a498dadfd2a6dba43deb5fa586921 352 PANTHER PTHR23024:SF24 94 340 2.6E-69 T 19-04-2016 APA12_RS09590 f34a498dadfd2a6dba43deb5fa586921 352 SUPERFAMILY SSF53474 79 348 3.62E-65 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS09590 f34a498dadfd2a6dba43deb5fa586921 352 PANTHER PTHR23024 94 340 2.6E-69 T 19-04-2016 APA12_RS09590 f34a498dadfd2a6dba43deb5fa586921 352 Pfam PF07859 alpha/beta hydrolase fold 122 326 4.4E-65 T 19-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 APA12_RS05995 e290ea547ded14894eb67308e04ae551 295 PIRSF PIRSF001500 2 276 1.5E-57 T 19-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 APA12_RS05995 e290ea547ded14894eb67308e04ae551 295 Pfam PF01842 ACT domain 194 258 1.6E-7 T 19-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 APA12_RS05995 e290ea547ded14894eb67308e04ae551 295 Gene3D G3DSA:3.40.190.10 90 168 1.1E-25 T 19-04-2016 APA12_RS05995 e290ea547ded14894eb67308e04ae551 295 SUPERFAMILY SSF55021 184 273 3.38E-24 T 19-04-2016 APA12_RS05995 e290ea547ded14894eb67308e04ae551 295 PANTHER PTHR21022 6 293 5.4E-89 T 19-04-2016 APA12_RS05995 e290ea547ded14894eb67308e04ae551 295 Pfam PF00800 Prephenate dehydratase 6 180 7.7E-49 T 19-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 APA12_RS05995 e290ea547ded14894eb67308e04ae551 295 SUPERFAMILY SSF53850 6 182 3.91E-52 T 19-04-2016 APA12_RS05995 e290ea547ded14894eb67308e04ae551 295 Gene3D G3DSA:3.40.190.10 3 89 6.4E-25 T 19-04-2016 APA12_RS05995 e290ea547ded14894eb67308e04ae551 295 Gene3D G3DSA:3.30.70.260 191 274 1.1E-24 T 19-04-2016 APA12_RS06560 f2f0d7743929e93659d9bfb83d1c6648 139 PANTHER PTHR30558:SF3 18 139 3.5E-23 T 19-04-2016 APA12_RS06560 f2f0d7743929e93659d9bfb83d1c6648 139 Pfam PF02472 Biopolymer transport protein ExbD/TolR 16 137 2.2E-26 T 19-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 APA12_RS06560 f2f0d7743929e93659d9bfb83d1c6648 139 PANTHER PTHR30558 18 139 3.5E-23 T 19-04-2016 APA12_RS00350 f2f0d7743929e93659d9bfb83d1c6648 139 PANTHER PTHR30558:SF3 18 139 3.5E-23 T 19-04-2016 APA12_RS00350 f2f0d7743929e93659d9bfb83d1c6648 139 Pfam PF02472 Biopolymer transport protein ExbD/TolR 16 137 2.2E-26 T 19-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 APA12_RS00350 f2f0d7743929e93659d9bfb83d1c6648 139 PANTHER PTHR30558 18 139 3.5E-23 T 19-04-2016 APA12_RS04970 69f8858a81ad99a78673a93fcb9b7a84 512 Gene3D G3DSA:3.40.720.10 10 83 6.6E-91 T 19-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APA12_RS04970 69f8858a81ad99a78673a93fcb9b7a84 512 Gene3D G3DSA:3.40.720.10 314 511 6.6E-91 T 19-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APA12_RS04970 69f8858a81ad99a78673a93fcb9b7a84 512 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 11 510 3.2E-209 T 19-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APA12_RS04970 69f8858a81ad99a78673a93fcb9b7a84 512 SUPERFAMILY SSF53649 310 510 7.61E-80 T 19-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APA12_RS04970 69f8858a81ad99a78673a93fcb9b7a84 512 SUPERFAMILY SSF53649 10 83 7.61E-80 T 19-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APA12_RS04970 69f8858a81ad99a78673a93fcb9b7a84 512 PANTHER PTHR31637:SF0 4 512 1.3E-246 T 19-04-2016 APA12_RS04970 69f8858a81ad99a78673a93fcb9b7a84 512 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 90 296 4.5E-72 T 19-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APA12_RS04970 69f8858a81ad99a78673a93fcb9b7a84 512 Gene3D G3DSA:3.40.1450.10 84 310 5.0E-84 T 19-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APA12_RS04970 69f8858a81ad99a78673a93fcb9b7a84 512 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 10 511 48.792 T 19-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APA12_RS04970 69f8858a81ad99a78673a93fcb9b7a84 512 Pfam PF01676 Metalloenzyme superfamily 11 499 2.4E-79 T 19-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 APA12_RS04970 69f8858a81ad99a78673a93fcb9b7a84 512 PIRSF PIRSF001492 4 512 1.2E-200 T 19-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APA12_RS04970 69f8858a81ad99a78673a93fcb9b7a84 512 PANTHER PTHR31637 4 512 1.3E-246 T 19-04-2016 APA12_RS04970 69f8858a81ad99a78673a93fcb9b7a84 512 SUPERFAMILY SSF64158 83 301 7.72E-77 T 19-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APA12_RS07780 2ea95bee5e945da4aa35d121a7483148 563 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 6 538 7.8E-130 T 19-04-2016 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0006810|GO:0016021|GO:0042626 APA12_RS07780 2ea95bee5e945da4aa35d121a7483148 563 Gene3D G3DSA:1.20.1560.10 6 325 2.9E-27 T 19-04-2016 APA12_RS07780 2ea95bee5e945da4aa35d121a7483148 563 PANTHER PTHR24222 1 561 6.1E-144 T 19-04-2016 APA12_RS07780 2ea95bee5e945da4aa35d121a7483148 563 Pfam PF00005 ABC transporter 360 507 2.7E-28 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS07780 2ea95bee5e945da4aa35d121a7483148 563 PANTHER PTHR24222:SF30 1 561 6.1E-144 T 19-04-2016 APA12_RS07780 2ea95bee5e945da4aa35d121a7483148 563 SUPERFAMILY SSF52540 337 561 1.65E-64 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS07780 2ea95bee5e945da4aa35d121a7483148 563 ProSitePatterns PS00211 ABC transporters family signature. 480 494 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APA12_RS07780 2ea95bee5e945da4aa35d121a7483148 563 SMART SM00382 368 555 9.9E-14 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS07780 2ea95bee5e945da4aa35d121a7483148 563 SUPERFAMILY SSF90123 10 330 2.62E-34 T 19-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APA12_RS07780 2ea95bee5e945da4aa35d121a7483148 563 Pfam PF00664 ABC transporter transmembrane region 60 279 5.6E-6 T 19-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APA12_RS07780 2ea95bee5e945da4aa35d121a7483148 563 Gene3D G3DSA:3.40.50.300 342 561 2.3E-60 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS11410 64f7a691969024eda3055a27ab50b454 208 PANTHER PTHR30069 37 208 1.1E-56 T 19-04-2016 APA12_RS11410 64f7a691969024eda3055a27ab50b454 208 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 11 31 1.5E-7 T 19-04-2016 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 APA12_RS11410 64f7a691969024eda3055a27ab50b454 208 SUPERFAMILY SSF52540 18 208 3.61E-71 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS11410 64f7a691969024eda3055a27ab50b454 208 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 37 208 1.0E-68 T 19-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 APA12_RS11410 64f7a691969024eda3055a27ab50b454 208 PIRSF PIRSF015617 11 208 7.4E-72 T 19-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 APA12_RS11410 64f7a691969024eda3055a27ab50b454 208 Gene3D G3DSA:3.40.50.300 12 208 2.4E-74 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS11410 64f7a691969024eda3055a27ab50b454 208 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 37 208 3.9E-62 T 19-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 APA12_RS04045 a417f4c370f451cdee569401cb135ca8 475 Pfam PF14376 Haem-binding domain 16 151 1.9E-31 T 19-04-2016 IPR025992 Haem-binding domain APA12_RS04045 a417f4c370f451cdee569401cb135ca8 475 Gene3D G3DSA:1.10.760.10 174 324 5.6E-47 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS04045 a417f4c370f451cdee569401cb135ca8 475 PANTHER PTHR30600:SF7 48 468 1.6E-127 T 19-04-2016 APA12_RS04045 a417f4c370f451cdee569401cb135ca8 475 PANTHER PTHR30600 48 468 1.6E-127 T 19-04-2016 APA12_RS04045 a417f4c370f451cdee569401cb135ca8 475 Pfam PF03150 Di-haem cytochrome c peroxidase 184 332 1.1E-45 T 19-04-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 APA12_RS04045 a417f4c370f451cdee569401cb135ca8 475 Gene3D G3DSA:1.10.760.10 325 462 2.2E-38 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS04045 a417f4c370f451cdee569401cb135ca8 475 SMART SM01235 13 154 1.8E-53 T 19-04-2016 IPR025992 Haem-binding domain APA12_RS04045 a417f4c370f451cdee569401cb135ca8 475 SUPERFAMILY SSF46626 167 321 2.25E-45 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS04045 a417f4c370f451cdee569401cb135ca8 475 Pfam PF00034 Cytochrome c 340 458 2.1E-9 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS04045 a417f4c370f451cdee569401cb135ca8 475 SUPERFAMILY SSF46626 323 462 1.07E-34 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS04895 23bb38fc376eddd3e97802451c3425a5 367 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 36 42 - T 19-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APA12_RS04895 23bb38fc376eddd3e97802451c3425a5 367 PANTHER PTHR13370:SF8 14 277 6.4E-48 T 19-04-2016 APA12_RS04895 23bb38fc376eddd3e97802451c3425a5 367 Pfam PF01555 DNA methylase 33 253 6.2E-54 T 19-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 APA12_RS04895 23bb38fc376eddd3e97802451c3425a5 367 SUPERFAMILY SSF53335 9 258 1.84E-69 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS04895 23bb38fc376eddd3e97802451c3425a5 367 PANTHER PTHR13370 14 277 6.4E-48 T 19-04-2016 APA12_RS04895 23bb38fc376eddd3e97802451c3425a5 367 Gene3D G3DSA:3.40.50.150 14 265 6.1E-71 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS04895 23bb38fc376eddd3e97802451c3425a5 367 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 215 233 1.3E-36 T 19-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APA12_RS04895 23bb38fc376eddd3e97802451c3425a5 367 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 238 258 1.3E-36 T 19-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APA12_RS04895 23bb38fc376eddd3e97802451c3425a5 367 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 196 213 1.3E-36 T 19-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APA12_RS04895 23bb38fc376eddd3e97802451c3425a5 367 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 81 101 1.3E-36 T 19-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APA12_RS04895 23bb38fc376eddd3e97802451c3425a5 367 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 32 46 1.3E-36 T 19-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APA12_RS09045 351854977bf2bf0e7e15c0c7230bf810 97 Gene3D G3DSA:2.30.33.40 3 95 4.6E-40 T 19-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APA12_RS09045 351854977bf2bf0e7e15c0c7230bf810 97 Pfam PF00166 Chaperonin 10 Kd subunit 3 95 6.8E-38 T 19-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APA12_RS09045 351854977bf2bf0e7e15c0c7230bf810 97 SUPERFAMILY SSF50129 2 95 6.89E-37 T 19-04-2016 IPR011032 GroES-like APA12_RS09045 351854977bf2bf0e7e15c0c7230bf810 97 Hamap MF_00580 10 kDa chaperonin [groS]. 3 96 27.384 T 19-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APA12_RS09045 351854977bf2bf0e7e15c0c7230bf810 97 PRINTS PR00297 10kDa chaperonin signature 4 19 4.6E-34 T 19-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APA12_RS09045 351854977bf2bf0e7e15c0c7230bf810 97 PRINTS PR00297 10kDa chaperonin signature 26 47 4.6E-34 T 19-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APA12_RS09045 351854977bf2bf0e7e15c0c7230bf810 97 PRINTS PR00297 10kDa chaperonin signature 82 95 4.6E-34 T 19-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APA12_RS09045 351854977bf2bf0e7e15c0c7230bf810 97 PRINTS PR00297 10kDa chaperonin signature 61 73 4.6E-34 T 19-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APA12_RS09045 351854977bf2bf0e7e15c0c7230bf810 97 SMART SM00883 3 95 6.8E-62 T 19-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APA12_RS09045 351854977bf2bf0e7e15c0c7230bf810 97 ProSitePatterns PS00681 Chaperonins cpn10 signature. 4 28 - T 19-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 APA12_RS09045 351854977bf2bf0e7e15c0c7230bf810 97 PANTHER PTHR10772 1 95 1.3E-48 T 19-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APA12_RS10040 c539c7d9570d4984a3f2e199fa5b5b58 333 Pfam PF02401 LytB protein 24 306 6.0E-85 T 19-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 APA12_RS10040 c539c7d9570d4984a3f2e199fa5b5b58 333 PANTHER PTHR30426 22 332 1.8E-134 T 19-04-2016 APA12_RS10040 c539c7d9570d4984a3f2e199fa5b5b58 333 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 22 310 36.337 T 19-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 APA12_RS10040 c539c7d9570d4984a3f2e199fa5b5b58 333 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 23 306 2.3E-93 T 19-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 APA12_RS15270 432e5309ea91767a47fa54103e998019 74 PANTHER PTHR30158:SF4 6 74 5.5E-23 T 19-04-2016 APA12_RS15270 432e5309ea91767a47fa54103e998019 74 Pfam PF13533 Biotin-lipoyl like 32 69 8.1E-6 T 19-04-2016 APA12_RS15270 432e5309ea91767a47fa54103e998019 74 PANTHER PTHR30158 6 74 5.5E-23 T 19-04-2016 APA12_RS15270 432e5309ea91767a47fa54103e998019 74 SUPERFAMILY SSF111369 19 74 3.01E-18 T 19-04-2016 APA12_RS15270 432e5309ea91767a47fa54103e998019 74 Gene3D G3DSA:2.40.50.100 31 64 1.0E-10 T 19-04-2016 APA12_RS00160 6f2ee58936d5833783793f232b614339 603 PIRSF PIRSF000171 10 593 2.0E-38 T 19-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit APA12_RS00160 6f2ee58936d5833783793f232b614339 603 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 17 603 3.2E-292 T 19-04-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 APA12_RS00160 6f2ee58936d5833783793f232b614339 603 Pfam PF02910 Fumarate reductase flavoprotein C-term 470 603 2.3E-42 T 19-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 APA12_RS00160 6f2ee58936d5833783793f232b614339 603 Gene3D G3DSA:1.20.58.100 442 550 2.1E-36 T 19-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 APA12_RS00160 6f2ee58936d5833783793f232b614339 603 PANTHER PTHR11632 12 598 0.0 T 19-04-2016 APA12_RS00160 6f2ee58936d5833783793f232b614339 603 Gene3D G3DSA:3.90.700.10 254 359 1.4E-41 T 19-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain APA12_RS00160 6f2ee58936d5833783793f232b614339 603 SUPERFAMILY SSF56425 247 365 6.58E-41 T 19-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain APA12_RS00160 6f2ee58936d5833783793f232b614339 603 Pfam PF00890 FAD binding domain 20 415 2.6E-123 T 19-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain APA12_RS00160 6f2ee58936d5833783793f232b614339 603 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 20 603 1.8E-241 T 19-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 APA12_RS00160 6f2ee58936d5833783793f232b614339 603 PANTHER PTHR11632:SF51 12 598 0.0 T 19-04-2016 APA12_RS00160 6f2ee58936d5833783793f232b614339 603 Gene3D G3DSA:4.10.80.40 551 603 2.3E-28 T 19-04-2016 APA12_RS00160 6f2ee58936d5833783793f232b614339 603 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 54 63 - T 19-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 APA12_RS00160 6f2ee58936d5833783793f232b614339 603 SUPERFAMILY SSF46977 461 603 7.33E-49 T 19-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 APA12_RS00160 6f2ee58936d5833783793f232b614339 603 Gene3D G3DSA:3.50.50.60 361 435 3.4E-127 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS00160 6f2ee58936d5833783793f232b614339 603 Gene3D G3DSA:3.50.50.60 11 253 3.4E-127 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS00160 6f2ee58936d5833783793f232b614339 603 SUPERFAMILY SSF51905 369 442 1.72E-81 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS00160 6f2ee58936d5833783793f232b614339 603 SUPERFAMILY SSF51905 13 270 1.72E-81 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS08830 b69bf2ac7847dae70e5ebf1c3b9136ce 871 SMART SM01086 770 859 3.0E-35 T 19-04-2016 IPR019489 Clp ATPase, C-terminal APA12_RS08830 b69bf2ac7847dae70e5ebf1c3b9136ce 871 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 712 726 1.1E-41 T 19-04-2016 IPR001270 ClpA/B family GO:0005524 APA12_RS08830 b69bf2ac7847dae70e5ebf1c3b9136ce 871 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 679 697 1.1E-41 T 19-04-2016 IPR001270 ClpA/B family GO:0005524 APA12_RS08830 b69bf2ac7847dae70e5ebf1c3b9136ce 871 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 605 623 1.1E-41 T 19-04-2016 IPR001270 ClpA/B family GO:0005524 APA12_RS08830 b69bf2ac7847dae70e5ebf1c3b9136ce 871 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 650 668 1.1E-41 T 19-04-2016 IPR001270 ClpA/B family GO:0005524 APA12_RS08830 b69bf2ac7847dae70e5ebf1c3b9136ce 871 SUPERFAMILY SSF81923 5 156 6.41E-39 T 19-04-2016 IPR004176 Clp, N-terminal GO:0019538 APA12_RS08830 b69bf2ac7847dae70e5ebf1c3b9136ce 871 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 770 850 7.1E-26 T 19-04-2016 IPR019489 Clp ATPase, C-terminal APA12_RS08830 b69bf2ac7847dae70e5ebf1c3b9136ce 871 Gene3D G3DSA:1.10.8.60 780 862 5.7E-31 T 19-04-2016 APA12_RS08830 b69bf2ac7847dae70e5ebf1c3b9136ce 871 Pfam PF07724 AAA domain (Cdc48 subfamily) 600 764 9.3E-56 T 19-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APA12_RS08830 b69bf2ac7847dae70e5ebf1c3b9136ce 871 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 7.2E-14 T 19-04-2016 IPR004176 Clp, N-terminal GO:0019538 APA12_RS08830 b69bf2ac7847dae70e5ebf1c3b9136ce 871 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 145 9.4E-8 T 19-04-2016 IPR004176 Clp, N-terminal GO:0019538 APA12_RS08830 b69bf2ac7847dae70e5ebf1c3b9136ce 871 Gene3D G3DSA:1.10.8.60 345 429 2.0E-38 T 19-04-2016 APA12_RS08830 b69bf2ac7847dae70e5ebf1c3b9136ce 871 Gene3D G3DSA:3.40.50.300 557 779 1.5E-57 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS08830 b69bf2ac7847dae70e5ebf1c3b9136ce 871 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 320 1.3E-13 T 19-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APA12_RS08830 b69bf2ac7847dae70e5ebf1c3b9136ce 871 Gene3D G3DSA:1.10.1780.10 1 148 1.9E-43 T 19-04-2016 IPR004176 Clp, N-terminal GO:0019538 APA12_RS08830 b69bf2ac7847dae70e5ebf1c3b9136ce 871 SMART SM00382 601 771 7.9E-10 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS08830 b69bf2ac7847dae70e5ebf1c3b9136ce 871 SMART SM00382 199 344 1.1E-10 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS08830 b69bf2ac7847dae70e5ebf1c3b9136ce 871 Gene3D G3DSA:3.40.50.300 160 342 3.5E-49 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS08830 b69bf2ac7847dae70e5ebf1c3b9136ce 871 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 635 653 - T 19-04-2016 IPR028299 ClpA/B, conserved site 2 APA12_RS08830 b69bf2ac7847dae70e5ebf1c3b9136ce 871 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 295 307 - T 19-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 APA12_RS08830 b69bf2ac7847dae70e5ebf1c3b9136ce 871 SUPERFAMILY SSF52540 550 853 2.65E-81 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS08830 b69bf2ac7847dae70e5ebf1c3b9136ce 871 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 858 0.0 T 19-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 APA12_RS08830 b69bf2ac7847dae70e5ebf1c3b9136ce 871 SUPERFAMILY SSF52540 159 549 6.37E-101 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS08830 b69bf2ac7847dae70e5ebf1c3b9136ce 871 PANTHER PTHR11638 1 857 0.0 T 19-04-2016 APA12_RS08830 b69bf2ac7847dae70e5ebf1c3b9136ce 871 PANTHER PTHR11638:SF18 1 857 0.0 T 19-04-2016 APA12_RS07510 cd05dcc7cf4dac853d0860d77c61bff0 803 PANTHER PTHR11615:SF149 664 803 2.7E-248 T 19-04-2016 APA12_RS07510 cd05dcc7cf4dac853d0860d77c61bff0 803 PANTHER PTHR11615:SF149 572 646 2.7E-248 T 19-04-2016 APA12_RS07510 cd05dcc7cf4dac853d0860d77c61bff0 803 PANTHER PTHR11615:SF149 397 481 2.7E-248 T 19-04-2016 APA12_RS07510 cd05dcc7cf4dac853d0860d77c61bff0 803 PANTHER PTHR11615:SF149 1 182 2.7E-248 T 19-04-2016 APA12_RS07510 cd05dcc7cf4dac853d0860d77c61bff0 803 PANTHER PTHR11615:SF149 286 380 2.7E-248 T 19-04-2016 APA12_RS07510 cd05dcc7cf4dac853d0860d77c61bff0 803 PANTHER PTHR11615:SF149 210 247 2.7E-248 T 19-04-2016 APA12_RS07510 cd05dcc7cf4dac853d0860d77c61bff0 803 SUPERFAMILY SSF53706 1 638 2.88E-219 T 19-04-2016 APA12_RS07510 cd05dcc7cf4dac853d0860d77c61bff0 803 Pfam PF01568 Molydopterin dinucleotide binding domain 690 796 2.8E-14 T 19-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 APA12_RS07510 cd05dcc7cf4dac853d0860d77c61bff0 803 SUPERFAMILY SSF50692 674 803 3.94E-39 T 19-04-2016 IPR009010 Aspartate decarboxylase-like domain APA12_RS07510 cd05dcc7cf4dac853d0860d77c61bff0 803 SUPERFAMILY SSF50692 629 647 3.94E-39 T 19-04-2016 IPR009010 Aspartate decarboxylase-like domain APA12_RS07510 cd05dcc7cf4dac853d0860d77c61bff0 803 PANTHER PTHR11615 664 803 2.7E-248 T 19-04-2016 APA12_RS07510 cd05dcc7cf4dac853d0860d77c61bff0 803 PANTHER PTHR11615 572 646 2.7E-248 T 19-04-2016 APA12_RS07510 cd05dcc7cf4dac853d0860d77c61bff0 803 PANTHER PTHR11615 397 481 2.7E-248 T 19-04-2016 APA12_RS07510 cd05dcc7cf4dac853d0860d77c61bff0 803 PANTHER PTHR11615 1 182 2.7E-248 T 19-04-2016 APA12_RS07510 cd05dcc7cf4dac853d0860d77c61bff0 803 PANTHER PTHR11615 286 380 2.7E-248 T 19-04-2016 APA12_RS07510 cd05dcc7cf4dac853d0860d77c61bff0 803 PANTHER PTHR11615 210 247 2.7E-248 T 19-04-2016 APA12_RS07510 cd05dcc7cf4dac853d0860d77c61bff0 803 Gene3D G3DSA:2.40.40.20 606 803 2.3E-44 T 19-04-2016 APA12_RS07510 cd05dcc7cf4dac853d0860d77c61bff0 803 Pfam PF00384 Molybdopterin oxidoreductase 2 377 1.5E-22 T 19-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APA12_RS07510 cd05dcc7cf4dac853d0860d77c61bff0 803 Gene3D G3DSA:3.40.50.740 320 470 5.6E-56 T 19-04-2016 APA12_RS07510 cd05dcc7cf4dac853d0860d77c61bff0 803 TIGRFAM TIGR01553 formate-DH-alph: formate dehydrogenase-N alpha subunit 1 802 0.0 T 19-04-2016 IPR006443 Formate dehydrogenase-N, alpha subunit GO:0008863|GO:0009055|GO:0043546|GO:0045333|GO:0047111 APA12_RS07510 cd05dcc7cf4dac853d0860d77c61bff0 803 Gene3D G3DSA:3.40.228.10 1 108 6.8E-69 T 19-04-2016 APA12_RS07510 cd05dcc7cf4dac853d0860d77c61bff0 803 Gene3D G3DSA:3.40.228.10 152 261 6.8E-69 T 19-04-2016 APA12_RS12490 219cc95679fa4689fec758e002e7a7df 167 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 13 156 3.2E-20 T 19-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 APA12_RS12490 219cc95679fa4689fec758e002e7a7df 167 Hamap MF_01398 ATP synthase subunit b [atpF]. 4 158 11.536 T 19-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 APA12_RS12490 219cc95679fa4689fec758e002e7a7df 167 Pfam PF00430 ATP synthase B/B' CF(0) 10 138 2.3E-25 T 19-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 APA12_RS10585 feb2e4071eb935eace14c2239ebdf8f6 542 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 14 488 7.0E-148 T 19-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 APA12_RS10585 feb2e4071eb935eace14c2239ebdf8f6 542 SUPERFAMILY SSF53756 9 494 5.58E-103 T 19-04-2016 APA12_RS10585 feb2e4071eb935eace14c2239ebdf8f6 542 Pfam PF08323 Starch synthase catalytic domain 14 247 7.3E-63 T 19-04-2016 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 APA12_RS10585 feb2e4071eb935eace14c2239ebdf8f6 542 Pfam PF00534 Glycosyl transferases group 1 301 451 1.1E-12 T 19-04-2016 IPR001296 Glycosyl transferase, family 1 APA12_RS10585 feb2e4071eb935eace14c2239ebdf8f6 542 Hamap MF_00484 Glycogen synthase [glgA]. 13 488 40.662 T 19-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 APA12_RS10585 feb2e4071eb935eace14c2239ebdf8f6 542 PANTHER PTHR12526:SF17 14 525 3.4E-114 T 19-04-2016 APA12_RS10585 feb2e4071eb935eace14c2239ebdf8f6 542 Gene3D G3DSA:3.40.50.2000 262 467 7.4E-62 T 19-04-2016 APA12_RS10585 feb2e4071eb935eace14c2239ebdf8f6 542 PANTHER PTHR12526 14 525 3.4E-114 T 19-04-2016 APA12_RS13085 5a04eed8068a1b379e6da877c0ceb54e 113 PANTHER PTHR30007 1 112 9.1E-29 T 19-04-2016 APA12_RS13085 5a04eed8068a1b379e6da877c0ceb54e 113 PANTHER PTHR30007:SF22 1 112 9.1E-29 T 19-04-2016 APA12_RS13085 5a04eed8068a1b379e6da877c0ceb54e 113 Pfam PF13586 Transposase DDE domain 29 112 8.5E-22 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS11245 5a04eed8068a1b379e6da877c0ceb54e 113 PANTHER PTHR30007 1 112 9.1E-29 T 19-04-2016 APA12_RS11245 5a04eed8068a1b379e6da877c0ceb54e 113 PANTHER PTHR30007:SF22 1 112 9.1E-29 T 19-04-2016 APA12_RS11245 5a04eed8068a1b379e6da877c0ceb54e 113 Pfam PF13586 Transposase DDE domain 29 112 8.5E-22 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS02980 5a04eed8068a1b379e6da877c0ceb54e 113 PANTHER PTHR30007 1 112 9.1E-29 T 19-04-2016 APA12_RS02980 5a04eed8068a1b379e6da877c0ceb54e 113 PANTHER PTHR30007:SF22 1 112 9.1E-29 T 19-04-2016 APA12_RS02980 5a04eed8068a1b379e6da877c0ceb54e 113 Pfam PF13586 Transposase DDE domain 29 112 8.5E-22 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS06840 5a04eed8068a1b379e6da877c0ceb54e 113 PANTHER PTHR30007 1 112 9.1E-29 T 19-04-2016 APA12_RS06840 5a04eed8068a1b379e6da877c0ceb54e 113 PANTHER PTHR30007:SF22 1 112 9.1E-29 T 19-04-2016 APA12_RS06840 5a04eed8068a1b379e6da877c0ceb54e 113 Pfam PF13586 Transposase DDE domain 29 112 8.5E-22 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS06930 5a04eed8068a1b379e6da877c0ceb54e 113 PANTHER PTHR30007 1 112 9.1E-29 T 19-04-2016 APA12_RS06930 5a04eed8068a1b379e6da877c0ceb54e 113 PANTHER PTHR30007:SF22 1 112 9.1E-29 T 19-04-2016 APA12_RS06930 5a04eed8068a1b379e6da877c0ceb54e 113 Pfam PF13586 Transposase DDE domain 29 112 8.5E-22 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS02235 5a04eed8068a1b379e6da877c0ceb54e 113 PANTHER PTHR30007 1 112 9.1E-29 T 19-04-2016 APA12_RS02235 5a04eed8068a1b379e6da877c0ceb54e 113 PANTHER PTHR30007:SF22 1 112 9.1E-29 T 19-04-2016 APA12_RS02235 5a04eed8068a1b379e6da877c0ceb54e 113 Pfam PF13586 Transposase DDE domain 29 112 8.5E-22 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS06535 4875123e348f5facdea934d488ce060f 472 Gene3D G3DSA:3.50.50.60 302 367 6.9E-5 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS06535 4875123e348f5facdea934d488ce060f 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 218 243 5.8E-5 T 19-04-2016 APA12_RS06535 4875123e348f5facdea934d488ce060f 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 35 57 5.8E-5 T 19-04-2016 APA12_RS06535 4875123e348f5facdea934d488ce060f 472 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 118 253 6.6E-13 T 19-04-2016 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase APA12_RS06535 4875123e348f5facdea934d488ce060f 472 PANTHER PTHR23023 31 98 2.0E-95 T 19-04-2016 APA12_RS06535 4875123e348f5facdea934d488ce060f 472 PANTHER PTHR23023 115 366 2.0E-95 T 19-04-2016 APA12_RS06535 4875123e348f5facdea934d488ce060f 472 PANTHER PTHR23023:SF119 31 98 2.0E-95 T 19-04-2016 APA12_RS06535 4875123e348f5facdea934d488ce060f 472 PANTHER PTHR23023:SF119 115 366 2.0E-95 T 19-04-2016 APA12_RS06535 4875123e348f5facdea934d488ce060f 472 Gene3D G3DSA:3.50.50.60 34 254 2.5E-19 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS06535 4875123e348f5facdea934d488ce060f 472 SUPERFAMILY SSF51905 35 353 4.06E-29 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS13560 830b37952979c96d09580d3f94905c6d 233 Pfam PF13419 Haloacid dehalogenase-like hydrolase 18 197 7.9E-28 T 19-04-2016 IPR023214 HAD-like domain APA12_RS13560 830b37952979c96d09580d3f94905c6d 233 Gene3D G3DSA:3.40.50.1000 101 226 5.5E-39 T 19-04-2016 IPR023214 HAD-like domain APA12_RS13560 830b37952979c96d09580d3f94905c6d 233 Gene3D G3DSA:3.40.50.1000 11 29 5.5E-39 T 19-04-2016 IPR023214 HAD-like domain APA12_RS13560 830b37952979c96d09580d3f94905c6d 233 Gene3D G3DSA:1.10.150.240 34 95 5.7E-7 T 19-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 APA12_RS13560 830b37952979c96d09580d3f94905c6d 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 15 26 9.6E-8 T 19-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APA12_RS13560 830b37952979c96d09580d3f94905c6d 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 142 158 9.6E-8 T 19-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APA12_RS13560 830b37952979c96d09580d3f94905c6d 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 110 123 9.6E-8 T 19-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APA12_RS13560 830b37952979c96d09580d3f94905c6d 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 160 180 9.6E-8 T 19-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APA12_RS13560 830b37952979c96d09580d3f94905c6d 233 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 66 197 1.4E-13 T 19-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APA12_RS13560 830b37952979c96d09580d3f94905c6d 233 SUPERFAMILY SSF56784 15 225 4.4E-44 T 19-04-2016 IPR023214 HAD-like domain APA12_RS13560 830b37952979c96d09580d3f94905c6d 233 PANTHER PTHR18901 15 225 4.2E-43 T 19-04-2016 APA12_RS07830 986a9b812c6980388b361b8c99d85d52 563 PANTHER PTHR30445:SF2 6 562 4.0E-149 T 19-04-2016 APA12_RS07830 986a9b812c6980388b361b8c99d85d52 563 Pfam PF06826 Predicted Permease Membrane Region 19 181 1.8E-33 T 19-04-2016 IPR006512 YidE/YbjL duplication APA12_RS07830 986a9b812c6980388b361b8c99d85d52 563 Pfam PF06826 Predicted Permease Membrane Region 392 559 8.0E-30 T 19-04-2016 IPR006512 YidE/YbjL duplication APA12_RS07830 986a9b812c6980388b361b8c99d85d52 563 SUPERFAMILY SSF116726 307 381 6.93E-7 T 19-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APA12_RS07830 986a9b812c6980388b361b8c99d85d52 563 Gene3D G3DSA:3.30.70.1450 309 381 5.8E-6 T 19-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APA12_RS07830 986a9b812c6980388b361b8c99d85d52 563 TIGRFAM TIGR03802 Asp_Ala_antiprt: aspartate-alanine antiporter 8 562 1.5E-214 T 19-04-2016 IPR022457 Aspartate-alanine antiporter GO:0005215|GO:0016020 APA12_RS07830 986a9b812c6980388b361b8c99d85d52 563 PANTHER PTHR30445 6 562 4.0E-149 T 19-04-2016 APA12_RS02110 62f3f2c69b4adc15403b070b1bf84292 257 PANTHER PTHR24322 159 191 6.4E-71 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS02110 62f3f2c69b4adc15403b070b1bf84292 257 PANTHER PTHR24322 13 143 6.4E-71 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS02110 62f3f2c69b4adc15403b070b1bf84292 257 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 190 5.7E-5 T 19-04-2016 APA12_RS02110 62f3f2c69b4adc15403b070b1bf84292 257 SUPERFAMILY SSF51735 7 255 1.16E-53 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS02110 62f3f2c69b4adc15403b070b1bf84292 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 3.2E-17 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS02110 62f3f2c69b4adc15403b070b1bf84292 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 3.2E-17 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS02110 62f3f2c69b4adc15403b070b1bf84292 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 3.2E-17 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS02110 62f3f2c69b4adc15403b070b1bf84292 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 3.2E-17 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS02110 62f3f2c69b4adc15403b070b1bf84292 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 3.2E-17 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS02110 62f3f2c69b4adc15403b070b1bf84292 257 Gene3D G3DSA:3.40.50.720 5 256 8.1E-57 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS02110 62f3f2c69b4adc15403b070b1bf84292 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 255 1.5E-44 T 19-04-2016 APA12_RS02110 62f3f2c69b4adc15403b070b1bf84292 257 PANTHER PTHR24322:SF456 159 191 6.4E-71 T 19-04-2016 APA12_RS02110 62f3f2c69b4adc15403b070b1bf84292 257 PANTHER PTHR24322:SF456 13 143 6.4E-71 T 19-04-2016 APA12_RS02275 145a8f164aee9c319c8db695a0f853ae 302 SUPERFAMILY SSF46785 4 89 1.27E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS02275 145a8f164aee9c319c8db695a0f853ae 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 6.1E-7 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS02275 145a8f164aee9c319c8db695a0f853ae 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 6.1E-7 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS02275 145a8f164aee9c319c8db695a0f853ae 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 6.1E-7 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS02275 145a8f164aee9c319c8db695a0f853ae 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.3E-19 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS02275 145a8f164aee9c319c8db695a0f853ae 302 PANTHER PTHR30126:SF29 3 288 8.3E-64 T 19-04-2016 APA12_RS02275 145a8f164aee9c319c8db695a0f853ae 302 Gene3D G3DSA:3.40.190.10 90 172 4.6E-10 T 19-04-2016 APA12_RS02275 145a8f164aee9c319c8db695a0f853ae 302 Gene3D G3DSA:3.40.190.10 266 286 4.6E-10 T 19-04-2016 APA12_RS02275 145a8f164aee9c319c8db695a0f853ae 302 Pfam PF03466 LysR substrate binding domain 90 288 2.9E-27 T 19-04-2016 IPR005119 LysR, substrate-binding APA12_RS02275 145a8f164aee9c319c8db695a0f853ae 302 SUPERFAMILY SSF53850 90 291 8.32E-32 T 19-04-2016 APA12_RS02275 145a8f164aee9c319c8db695a0f853ae 302 Gene3D G3DSA:1.10.10.10 2 80 1.3E-24 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS02275 145a8f164aee9c319c8db695a0f853ae 302 Gene3D G3DSA:3.40.190.10 173 256 1.0E-6 T 19-04-2016 APA12_RS02275 145a8f164aee9c319c8db695a0f853ae 302 PANTHER PTHR30126 3 288 8.3E-64 T 19-04-2016 APA12_RS12915 7fce44ebd6c68858703e79376c010ba3 173 Pfam PF12100 Domain of unknown function (DUF3576) 67 165 2.6E-40 T 19-04-2016 IPR021959 Protein of unknown function DUF3576 APA12_RS06815 e58b1f089417861ec135660daccc0a3b 157 PANTHER PTHR30558:SF9 16 142 2.1E-62 T 19-04-2016 APA12_RS06815 e58b1f089417861ec135660daccc0a3b 157 TIGRFAM TIGR02803 ExbD_1: TonB system transport protein ExbD 15 134 1.3E-55 T 19-04-2016 IPR014170 TonB system transport protein ExbD type-1 GO:0006810|GO:0016020 APA12_RS06815 e58b1f089417861ec135660daccc0a3b 157 PANTHER PTHR30558 16 142 2.1E-62 T 19-04-2016 APA12_RS06815 e58b1f089417861ec135660daccc0a3b 157 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 133 3.0E-28 T 19-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 APA12_RS11455 4a2c3b0a92cc2294e33d9606bbdefbae 207 PANTHER PTHR30178 15 204 6.3E-81 T 19-04-2016 APA12_RS11455 4a2c3b0a92cc2294e33d9606bbdefbae 207 Pfam PF01184 GPR1/FUN34/yaaH family 6 191 3.6E-45 T 19-04-2016 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 APA12_RS11455 4a2c3b0a92cc2294e33d9606bbdefbae 207 PANTHER PTHR30178:SF6 15 204 6.3E-81 T 19-04-2016 APA12_RS11455 4a2c3b0a92cc2294e33d9606bbdefbae 207 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 16 25 - T 19-04-2016 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 APA12_RS04935 adb71742629265da11d0cf3f0fcc3a82 597 SUPERFAMILY SSF52540 347 593 7.94E-89 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS04935 adb71742629265da11d0cf3f0fcc3a82 597 Pfam PF00005 ABC transporter 374 523 5.7E-32 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS04935 adb71742629265da11d0cf3f0fcc3a82 597 SMART SM00382 383 569 1.4E-14 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS04935 adb71742629265da11d0cf3f0fcc3a82 597 ProSitePatterns PS00211 ABC transporters family signature. 495 509 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APA12_RS04935 adb71742629265da11d0cf3f0fcc3a82 597 PANTHER PTHR24221 24 596 8.8E-203 T 19-04-2016 APA12_RS04935 adb71742629265da11d0cf3f0fcc3a82 597 Gene3D G3DSA:1.20.1560.10 30 340 2.7E-56 T 19-04-2016 APA12_RS04935 adb71742629265da11d0cf3f0fcc3a82 597 SUPERFAMILY SSF90123 29 346 4.19E-58 T 19-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APA12_RS04935 adb71742629265da11d0cf3f0fcc3a82 597 Pfam PF00664 ABC transporter transmembrane region 44 302 4.5E-30 T 19-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APA12_RS04935 adb71742629265da11d0cf3f0fcc3a82 597 Gene3D G3DSA:3.40.50.300 358 587 2.5E-81 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS01635 f4f4dd20243fd4bbce64c6dbcff2ecbc 440 PANTHER PTHR22777:SF16 4 438 1.5E-139 T 19-04-2016 APA12_RS01635 f4f4dd20243fd4bbce64c6dbcff2ecbc 440 SMART SM01091 357 437 5.6E-26 T 19-04-2016 IPR005170 Transporter-associated domain APA12_RS01635 f4f4dd20243fd4bbce64c6dbcff2ecbc 440 PANTHER PTHR22777 4 438 1.5E-139 T 19-04-2016 APA12_RS01635 f4f4dd20243fd4bbce64c6dbcff2ecbc 440 Gene3D G3DSA:3.10.580.10 203 351 3.9E-14 T 19-04-2016 APA12_RS01635 f4f4dd20243fd4bbce64c6dbcff2ecbc 440 SUPERFAMILY SSF54631 204 345 2.36E-22 T 19-04-2016 APA12_RS01635 f4f4dd20243fd4bbce64c6dbcff2ecbc 440 SUPERFAMILY SSF56176 355 438 2.48E-19 T 19-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APA12_RS01635 f4f4dd20243fd4bbce64c6dbcff2ecbc 440 Gene3D G3DSA:3.30.465.10 352 436 2.4E-23 T 19-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APA12_RS01635 f4f4dd20243fd4bbce64c6dbcff2ecbc 440 Pfam PF01595 Domain of unknown function DUF21 10 202 2.5E-36 T 19-04-2016 IPR002550 Domain of unknown function DUF21 APA12_RS01635 f4f4dd20243fd4bbce64c6dbcff2ecbc 440 Pfam PF03471 Transporter associated domain 358 435 3.0E-21 T 19-04-2016 IPR005170 Transporter-associated domain APA12_RS01635 f4f4dd20243fd4bbce64c6dbcff2ecbc 440 Pfam PF00571 CBS domain 293 344 1.0E-6 T 19-04-2016 IPR000644 CBS domain APA12_RS11255 0d842223ffc7134540cbfbfb70f3d267 162 PANTHER PTHR30193:SF5 11 151 1.7E-29 T 19-04-2016 APA12_RS11255 0d842223ffc7134540cbfbfb70f3d267 162 Gene3D G3DSA:1.10.3720.10 6 150 9.7E-15 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS11255 0d842223ffc7134540cbfbfb70f3d267 162 PANTHER PTHR30193 11 151 1.7E-29 T 19-04-2016 APA12_RS11255 0d842223ffc7134540cbfbfb70f3d267 162 SUPERFAMILY SSF161098 19 156 2.09E-16 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS06500 cca0d5005512fd6c5f6e247aece63fad 271 TIGRFAM TIGR02964 xanthine_xdhC: xanthine dehydrogenase accessory protein XdhC 19 262 2.8E-81 T 19-04-2016 IPR014308 Xanthine dehydrogenase accessory protein XdhC APA12_RS06500 cca0d5005512fd6c5f6e247aece63fad 271 PANTHER PTHR30388 1 264 2.1E-41 T 19-04-2016 APA12_RS06500 cca0d5005512fd6c5f6e247aece63fad 271 PANTHER PTHR30388:SF5 1 264 2.1E-41 T 19-04-2016 APA12_RS06500 cca0d5005512fd6c5f6e247aece63fad 271 Pfam PF02625 XdhC and CoxI family 12 70 1.5E-13 T 19-04-2016 IPR003777 XdhC- CoxI APA12_RS06500 cca0d5005512fd6c5f6e247aece63fad 271 Gene3D G3DSA:3.40.50.720 103 186 2.9E-4 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS06500 cca0d5005512fd6c5f6e247aece63fad 271 Pfam PF13478 XdhC Rossmann domain 121 262 3.5E-28 T 19-04-2016 IPR027051 XdhC Rossmann domain APA12_RS09620 c32dd81f3cee850117a7e892b59a3cad 461 Gene3D G3DSA:3.40.1190.10 92 315 1.9E-64 T 19-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APA12_RS09620 c32dd81f3cee850117a7e892b59a3cad 461 Gene3D G3DSA:3.90.190.20 318 453 2.6E-34 T 19-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APA12_RS09620 c32dd81f3cee850117a7e892b59a3cad 461 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 1 453 30.516 T 19-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APA12_RS09620 c32dd81f3cee850117a7e892b59a3cad 461 PANTHER PTHR23135 13 459 1.2E-129 T 19-04-2016 APA12_RS09620 c32dd81f3cee850117a7e892b59a3cad 461 Pfam PF02875 Mur ligase family, glutamate ligase domain 328 398 3.0E-11 T 19-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APA12_RS09620 c32dd81f3cee850117a7e892b59a3cad 461 Pfam PF08245 Mur ligase middle domain 108 297 8.9E-43 T 19-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APA12_RS09620 c32dd81f3cee850117a7e892b59a3cad 461 PANTHER PTHR23135:SF3 13 459 1.2E-129 T 19-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APA12_RS09620 c32dd81f3cee850117a7e892b59a3cad 461 Pfam PF01225 Mur ligase family, catalytic domain 26 73 5.7E-10 T 19-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APA12_RS09620 c32dd81f3cee850117a7e892b59a3cad 461 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 31 452 8.8E-116 T 19-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APA12_RS09620 c32dd81f3cee850117a7e892b59a3cad 461 SUPERFAMILY SSF63418 5 99 3.4E-21 T 19-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APA12_RS09620 c32dd81f3cee850117a7e892b59a3cad 461 SUPERFAMILY SSF53244 328 452 3.85E-29 T 19-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APA12_RS09620 c32dd81f3cee850117a7e892b59a3cad 461 Gene3D G3DSA:3.40.1390.10 10 91 8.0E-20 T 19-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APA12_RS09620 c32dd81f3cee850117a7e892b59a3cad 461 SUPERFAMILY SSF53623 104 316 4.06E-51 T 19-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APA12_RS07600 135ffa0d051308c8696de35609e03f96 240 SUPERFAMILY SSF46894 130 231 1.79E-19 T 19-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APA12_RS07600 135ffa0d051308c8696de35609e03f96 240 SUPERFAMILY SSF52172 6 161 2.7E-37 T 19-04-2016 IPR011006 CheY-like superfamily APA12_RS07600 135ffa0d051308c8696de35609e03f96 240 Gene3D G3DSA:3.40.50.2300 7 128 3.4E-35 T 19-04-2016 APA12_RS07600 135ffa0d051308c8696de35609e03f96 240 Gene3D G3DSA:1.10.10.10 129 232 3.2E-23 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS07600 135ffa0d051308c8696de35609e03f96 240 Pfam PF00072 Response regulator receiver domain 7 119 2.5E-27 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS07600 135ffa0d051308c8696de35609e03f96 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 229 1.3E-20 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APA12_RS07600 135ffa0d051308c8696de35609e03f96 240 SMART SM00862 154 229 1.2E-18 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APA12_RS07600 135ffa0d051308c8696de35609e03f96 240 PANTHER PTHR26402:SF50 5 232 2.4E-71 T 19-04-2016 APA12_RS07600 135ffa0d051308c8696de35609e03f96 240 PANTHER PTHR26402 5 232 2.4E-71 T 19-04-2016 APA12_RS07600 135ffa0d051308c8696de35609e03f96 240 SMART SM00448 5 119 1.3E-36 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS04680 8e44ecfe64b25a0ac35e856150f3b867 1391 Pfam PF04997 RNA polymerase Rpb1, domain 1 16 343 7.9E-91 T 19-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APA12_RS04680 8e44ecfe64b25a0ac35e856150f3b867 1391 Gene3D G3DSA:2.40.50.100 1160 1215 4.6E-13 T 19-04-2016 APA12_RS04680 8e44ecfe64b25a0ac35e856150f3b867 1391 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1381 10.445 T 19-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APA12_RS04680 8e44ecfe64b25a0ac35e856150f3b867 1391 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1369 0.0 T 19-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APA12_RS04680 8e44ecfe64b25a0ac35e856150f3b867 1391 Gene3D G3DSA:2.40.40.20 350 377 2.6E-37 T 19-04-2016 APA12_RS04680 8e44ecfe64b25a0ac35e856150f3b867 1391 Gene3D G3DSA:2.40.40.20 418 490 2.6E-37 T 19-04-2016 APA12_RS04680 8e44ecfe64b25a0ac35e856150f3b867 1391 PANTHER PTHR19376 544 950 0.0 T 19-04-2016 APA12_RS04680 8e44ecfe64b25a0ac35e856150f3b867 1391 PANTHER PTHR19376 1308 1384 0.0 T 19-04-2016 APA12_RS04680 8e44ecfe64b25a0ac35e856150f3b867 1391 PANTHER PTHR19376 4 528 0.0 T 19-04-2016 APA12_RS04680 8e44ecfe64b25a0ac35e856150f3b867 1391 PANTHER PTHR19376 972 1162 0.0 T 19-04-2016 APA12_RS04680 8e44ecfe64b25a0ac35e856150f3b867 1391 PANTHER PTHR19376 1181 1267 0.0 T 19-04-2016 APA12_RS04680 8e44ecfe64b25a0ac35e856150f3b867 1391 SUPERFAMILY SSF64484 16 951 0.0 T 19-04-2016 APA12_RS04680 8e44ecfe64b25a0ac35e856150f3b867 1391 SUPERFAMILY SSF64484 1138 1368 0.0 T 19-04-2016 APA12_RS04680 8e44ecfe64b25a0ac35e856150f3b867 1391 PANTHER PTHR19376:SF32 544 950 0.0 T 19-04-2016 APA12_RS04680 8e44ecfe64b25a0ac35e856150f3b867 1391 PANTHER PTHR19376:SF32 1308 1384 0.0 T 19-04-2016 APA12_RS04680 8e44ecfe64b25a0ac35e856150f3b867 1391 PANTHER PTHR19376:SF32 4 528 0.0 T 19-04-2016 APA12_RS04680 8e44ecfe64b25a0ac35e856150f3b867 1391 PANTHER PTHR19376:SF32 972 1162 0.0 T 19-04-2016 APA12_RS04680 8e44ecfe64b25a0ac35e856150f3b867 1391 PANTHER PTHR19376:SF32 1181 1267 0.0 T 19-04-2016 APA12_RS04680 8e44ecfe64b25a0ac35e856150f3b867 1391 Pfam PF04998 RNA polymerase Rpb1, domain 5 773 1321 1.7E-72 T 19-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APA12_RS04680 8e44ecfe64b25a0ac35e856150f3b867 1391 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 486 1.8E-27 T 19-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APA12_RS04680 8e44ecfe64b25a0ac35e856150f3b867 1391 Pfam PF00623 RNA polymerase Rpb1, domain 2 345 382 1.5E-7 T 19-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APA12_RS04680 8e44ecfe64b25a0ac35e856150f3b867 1391 SMART SM00663 236 515 2.0E-185 T 19-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APA12_RS04680 8e44ecfe64b25a0ac35e856150f3b867 1391 Pfam PF05000 RNA polymerase Rpb1, domain 4 689 761 1.2E-15 T 19-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APA12_RS04680 8e44ecfe64b25a0ac35e856150f3b867 1391 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 13 654 32.214 T 19-04-2016 APA12_RS04680 8e44ecfe64b25a0ac35e856150f3b867 1391 Pfam PF04983 RNA polymerase Rpb1, domain 3 490 660 1.4E-24 T 19-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APA12_RS04460 50ad7bd1a26e926a85a250cf8545eaa1 772 Gene3D G3DSA:3.30.70.1230 612 761 3.5E-20 T 19-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 APA12_RS04460 50ad7bd1a26e926a85a250cf8545eaa1 772 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 612 755 4.9E-17 T 19-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 APA12_RS04460 50ad7bd1a26e926a85a250cf8545eaa1 772 SMART SM00044 556 753 2.6E-4 T 19-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 APA12_RS04460 50ad7bd1a26e926a85a250cf8545eaa1 772 SUPERFAMILY SSF55781 414 541 1.28E-6 T 19-04-2016 IPR029016 GAF domain-like APA12_RS04460 50ad7bd1a26e926a85a250cf8545eaa1 772 SUPERFAMILY SSF55073 612 758 3.14E-19 T 19-04-2016 IPR029787 Nucleotide cyclase APA12_RS04460 50ad7bd1a26e926a85a250cf8545eaa1 772 Pfam PF02743 Cache domain 114 328 5.7E-19 T 19-04-2016 IPR033479 Double Cache domain 1 APA12_RS04460 50ad7bd1a26e926a85a250cf8545eaa1 772 Gene3D G3DSA:3.30.450.20 208 337 2.0E-11 T 19-04-2016 APA12_RS04460 50ad7bd1a26e926a85a250cf8545eaa1 772 Gene3D G3DSA:3.30.450.40 413 541 7.1E-6 T 19-04-2016 IPR029016 GAF domain-like APA12_RS04460 50ad7bd1a26e926a85a250cf8545eaa1 772 Gene3D G3DSA:3.30.450.20 108 123 2.6E-8 T 19-04-2016 APA12_RS04460 50ad7bd1a26e926a85a250cf8545eaa1 772 Gene3D G3DSA:3.30.450.20 161 207 2.6E-8 T 19-04-2016 APA12_RS04460 50ad7bd1a26e926a85a250cf8545eaa1 772 SUPERFAMILY SSF103190 148 239 3.45E-6 T 19-04-2016 IPR029151 Periplasmic sensor domain-like APA12_RS09630 1a079b711c41753f94832c3a9d37d9d0 471 Gene3D G3DSA:3.40.1190.10 106 320 4.2E-58 T 19-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APA12_RS09630 1a079b711c41753f94832c3a9d37d9d0 471 SUPERFAMILY SSF51984 10 107 1.31E-9 T 19-04-2016 APA12_RS09630 1a079b711c41753f94832c3a9d37d9d0 471 Pfam PF08245 Mur ligase middle domain 129 303 1.5E-33 T 19-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APA12_RS09630 1a079b711c41753f94832c3a9d37d9d0 471 SUPERFAMILY SSF53244 322 460 1.74E-34 T 19-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APA12_RS09630 1a079b711c41753f94832c3a9d37d9d0 471 PANTHER PTHR23135 5 470 3.1E-128 T 19-04-2016 APA12_RS09630 1a079b711c41753f94832c3a9d37d9d0 471 SUPERFAMILY SSF53623 123 320 6.15E-49 T 19-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APA12_RS09630 1a079b711c41753f94832c3a9d37d9d0 471 Gene3D G3DSA:3.90.190.20 323 457 2.4E-39 T 19-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APA12_RS09630 1a079b711c41753f94832c3a9d37d9d0 471 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 127 150 - T 19-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 APA12_RS09630 1a079b711c41753f94832c3a9d37d9d0 471 Gene3D G3DSA:3.40.50.720 10 105 2.3E-11 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS09630 1a079b711c41753f94832c3a9d37d9d0 471 PANTHER PTHR23135:SF2 5 470 3.1E-128 T 19-04-2016 APA12_RS09630 1a079b711c41753f94832c3a9d37d9d0 471 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 12 461 30.036 T 19-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APA12_RS09630 1a079b711c41753f94832c3a9d37d9d0 471 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 14 458 1.4E-109 T 19-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APA12_RS04050 3f8aad7c287ba66b092964f6ec323b58 210 SMART SM00463 124 207 2.7E-4 T 19-04-2016 IPR002625 Smr domain APA12_RS04050 3f8aad7c287ba66b092964f6ec323b58 210 SUPERFAMILY SSF160443 125 207 6.02E-14 T 19-04-2016 IPR002625 Smr domain APA12_RS04050 3f8aad7c287ba66b092964f6ec323b58 210 PANTHER PTHR35562 2 52 7.1E-16 T 19-04-2016 APA12_RS04050 3f8aad7c287ba66b092964f6ec323b58 210 PANTHER PTHR35562 80 210 7.1E-16 T 19-04-2016 APA12_RS04050 3f8aad7c287ba66b092964f6ec323b58 210 PANTHER PTHR35562:SF2 2 52 7.1E-16 T 19-04-2016 APA12_RS04050 3f8aad7c287ba66b092964f6ec323b58 210 PANTHER PTHR35562:SF2 80 210 7.1E-16 T 19-04-2016 APA12_RS04050 3f8aad7c287ba66b092964f6ec323b58 210 Pfam PF01713 Smr domain 127 207 2.1E-16 T 19-04-2016 IPR002625 Smr domain APA12_RS01600 39ae8a07d54c74870e0f9d4bffd94424 229 PANTHER PTHR26402:SF292 4 225 1.0E-83 T 19-04-2016 APA12_RS01600 39ae8a07d54c74870e0f9d4bffd94424 229 Gene3D G3DSA:3.40.50.2300 2 123 5.4E-42 T 19-04-2016 APA12_RS01600 39ae8a07d54c74870e0f9d4bffd94424 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 4 225 3.6E-92 T 19-04-2016 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 APA12_RS01600 39ae8a07d54c74870e0f9d4bffd94424 229 SUPERFAMILY SSF46894 123 225 1.05E-28 T 19-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APA12_RS01600 39ae8a07d54c74870e0f9d4bffd94424 229 PANTHER PTHR26402 4 225 1.0E-83 T 19-04-2016 APA12_RS01600 39ae8a07d54c74870e0f9d4bffd94424 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 224 5.8E-26 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APA12_RS01600 39ae8a07d54c74870e0f9d4bffd94424 229 Gene3D G3DSA:1.10.10.10 127 226 3.5E-31 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS01600 39ae8a07d54c74870e0f9d4bffd94424 229 SMART SM00448 4 117 2.3E-46 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS01600 39ae8a07d54c74870e0f9d4bffd94424 229 Pfam PF00072 Response regulator receiver domain 7 117 2.5E-30 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS01600 39ae8a07d54c74870e0f9d4bffd94424 229 SMART SM00862 149 224 7.3E-26 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APA12_RS01600 39ae8a07d54c74870e0f9d4bffd94424 229 SUPERFAMILY SSF52172 2 130 8.54E-43 T 19-04-2016 IPR011006 CheY-like superfamily APA12_RS03870 8883159e70dea6eac75fafac807dc608 574 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 455 564 4.8E-40 T 19-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APA12_RS03870 8883159e70dea6eac75fafac807dc608 574 Pfam PF00364 Biotin-requiring enzyme 4 76 7.4E-20 T 19-04-2016 IPR000089 Biotin/lipoyl attachment APA12_RS03870 8883159e70dea6eac75fafac807dc608 574 Gene3D G3DSA:2.40.50.100 1 96 2.7E-28 T 19-04-2016 APA12_RS03870 8883159e70dea6eac75fafac807dc608 574 Gene3D G3DSA:3.50.50.60 113 252 1.3E-41 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS03870 8883159e70dea6eac75fafac807dc608 574 PANTHER PTHR22912 102 567 1.2E-258 T 19-04-2016 APA12_RS03870 8883159e70dea6eac75fafac807dc608 574 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 244 262 1.4E-38 T 19-04-2016 APA12_RS03870 8883159e70dea6eac75fafac807dc608 574 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 301 1.4E-38 T 19-04-2016 APA12_RS03870 8883159e70dea6eac75fafac807dc608 574 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 401 423 1.4E-38 T 19-04-2016 APA12_RS03870 8883159e70dea6eac75fafac807dc608 574 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 372 388 1.4E-38 T 19-04-2016 APA12_RS03870 8883159e70dea6eac75fafac807dc608 574 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 118 137 1.4E-38 T 19-04-2016 APA12_RS03870 8883159e70dea6eac75fafac807dc608 574 SUPERFAMILY SSF51905 113 474 1.1E-63 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS03870 8883159e70dea6eac75fafac807dc608 574 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 116 436 1.1E-70 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS03870 8883159e70dea6eac75fafac807dc608 574 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 19-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site APA12_RS03870 8883159e70dea6eac75fafac807dc608 574 PANTHER PTHR22912:SF151 102 567 1.2E-258 T 19-04-2016 APA12_RS03870 8883159e70dea6eac75fafac807dc608 574 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 116 573 1.0E-174 T 19-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 APA12_RS03870 8883159e70dea6eac75fafac807dc608 574 SUPERFAMILY SSF55424 451 573 1.39E-43 T 19-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 APA12_RS03870 8883159e70dea6eac75fafac807dc608 574 Gene3D G3DSA:3.50.50.60 253 442 5.5E-54 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS03870 8883159e70dea6eac75fafac807dc608 574 SUPERFAMILY SSF51230 1 95 4.32E-27 T 19-04-2016 IPR011053 Single hybrid motif APA12_RS03870 8883159e70dea6eac75fafac807dc608 574 Gene3D G3DSA:3.30.390.30 443 572 1.4E-50 T 19-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APA12_RS03870 8883159e70dea6eac75fafac807dc608 574 PIRSF PIRSF000350 38 572 6.4E-93 T 19-04-2016 APA12_RS03870 8883159e70dea6eac75fafac807dc608 574 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 151 161 - T 19-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 APA12_RS03870 8883159e70dea6eac75fafac807dc608 574 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 117 139 3.8E-78 T 19-04-2016 APA12_RS03870 8883159e70dea6eac75fafac807dc608 574 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 150 165 3.8E-78 T 19-04-2016 APA12_RS03870 8883159e70dea6eac75fafac807dc608 574 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 516 531 3.8E-78 T 19-04-2016 APA12_RS03870 8883159e70dea6eac75fafac807dc608 574 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 416 423 3.8E-78 T 19-04-2016 APA12_RS03870 8883159e70dea6eac75fafac807dc608 574 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 373 387 3.8E-78 T 19-04-2016 APA12_RS03870 8883159e70dea6eac75fafac807dc608 574 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 451 472 3.8E-78 T 19-04-2016 APA12_RS03870 8883159e70dea6eac75fafac807dc608 574 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 538 558 3.8E-78 T 19-04-2016 APA12_RS03870 8883159e70dea6eac75fafac807dc608 574 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 247 256 3.8E-78 T 19-04-2016 APA12_RS03870 8883159e70dea6eac75fafac807dc608 574 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 283 308 3.8E-78 T 19-04-2016 APA12_RS00235 7c6043c5c3abad97d98750ba788d338b 514 Gene3D G3DSA:2.60.40.10 413 514 2.4E-27 T 19-04-2016 IPR013783 Immunoglobulin-like fold APA12_RS00235 7c6043c5c3abad97d98750ba788d338b 514 SUPERFAMILY SSF74650 42 412 8.16E-152 T 19-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APA12_RS00235 7c6043c5c3abad97d98750ba788d338b 514 SUPERFAMILY SSF81296 413 514 3.92E-23 T 19-04-2016 IPR014756 Immunoglobulin E-set APA12_RS00235 7c6043c5c3abad97d98750ba788d338b 514 PIRSF PIRSF006281 8 514 1.6E-179 T 19-04-2016 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D UniPathway: UPA00637 APA12_RS00235 7c6043c5c3abad97d98750ba788d338b 514 Gene3D G3DSA:2.70.98.10 41 412 1.2E-158 T 19-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 APA12_RS00235 7c6043c5c3abad97d98750ba788d338b 514 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 42 512 1.1E-189 T 19-04-2016 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 UniPathway: UPA00637 APA12_RS00235 7c6043c5c3abad97d98750ba788d338b 514 PANTHER PTHR30504 18 514 2.7E-203 T 19-04-2016 APA12_RS07910 a85c4c9956dc63dbb08c48bd8d276457 167 Gene3D G3DSA:1.20.1260.10 4 166 5.0E-67 T 19-04-2016 IPR012347 Ferritin-related APA12_RS07910 a85c4c9956dc63dbb08c48bd8d276457 167 SUPERFAMILY SSF47240 2 159 1.5E-56 T 19-04-2016 IPR009078 Ferritin-like superfamily APA12_RS07910 a85c4c9956dc63dbb08c48bd8d276457 167 Pfam PF05974 Domain of unknown function (DUF892) 10 166 3.5E-60 T 19-04-2016 IPR010287 Domain of unknown function DUF892 APA12_RS07910 a85c4c9956dc63dbb08c48bd8d276457 167 PANTHER PTHR30565 1 163 2.2E-60 T 19-04-2016 APA12_RS08930 c416a6054010b54fafe490dabf0a9a24 216 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 13 215 4.0E-77 T 19-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 APA12_RS08930 c416a6054010b54fafe490dabf0a9a24 216 PANTHER PTHR10285 15 205 3.0E-84 T 19-04-2016 APA12_RS08930 c416a6054010b54fafe490dabf0a9a24 216 Pfam PF14681 Uracil phosphoribosyltransferase 13 215 2.9E-71 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like APA12_RS08930 c416a6054010b54fafe490dabf0a9a24 216 Gene3D G3DSA:3.40.50.2020 13 215 6.9E-77 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like APA12_RS08930 c416a6054010b54fafe490dabf0a9a24 216 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 10 216 41.752 T 19-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 APA12_RS08930 c416a6054010b54fafe490dabf0a9a24 216 SUPERFAMILY SSF53271 12 214 1.44E-64 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like APA12_RS04695 602bd637ea735f9a8340719cdd7e11a0 396 PANTHER PTHR23115 1 395 3.5E-250 T 19-04-2016 APA12_RS04695 602bd637ea735f9a8340719cdd7e11a0 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 150 3.5E-15 T 19-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APA12_RS04695 602bd637ea735f9a8340719cdd7e11a0 396 SUPERFAMILY SSF50465 304 396 9.59E-36 T 19-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal APA12_RS04695 602bd637ea735f9a8340719cdd7e11a0 396 Gene3D G3DSA:3.40.50.300 5 213 1.7E-70 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS04695 602bd637ea735f9a8340719cdd7e11a0 396 SUPERFAMILY SSF52540 4 216 6.54E-62 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS04695 602bd637ea735f9a8340719cdd7e11a0 396 Gene3D G3DSA:2.40.30.10 214 300 5.6E-37 T 19-04-2016 APA12_RS04695 602bd637ea735f9a8340719cdd7e11a0 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 3.4E-229 T 19-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 APA12_RS04695 602bd637ea735f9a8340719cdd7e11a0 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 1.7E-58 T 19-04-2016 APA12_RS04695 602bd637ea735f9a8340719cdd7e11a0 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.52 T 19-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 APA12_RS04695 602bd637ea735f9a8340719cdd7e11a0 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 3.0E-33 T 19-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal APA12_RS04695 602bd637ea735f9a8340719cdd7e11a0 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 19-04-2016 IPR031157 Tr-type G domain, conserved site APA12_RS04695 602bd637ea735f9a8340719cdd7e11a0 396 SUPERFAMILY SSF50447 205 303 7.46E-31 T 19-04-2016 IPR009000 Translation protein, beta-barrel domain APA12_RS04695 602bd637ea735f9a8340719cdd7e11a0 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 2.4E-17 T 19-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APA12_RS04695 602bd637ea735f9a8340719cdd7e11a0 396 Gene3D G3DSA:2.40.30.10 302 395 4.4E-46 T 19-04-2016 APA12_RS04695 602bd637ea735f9a8340719cdd7e11a0 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 3.16E-24 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APA12_RS04695 602bd637ea735f9a8340719cdd7e11a0 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.16E-24 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APA12_RS04695 602bd637ea735f9a8340719cdd7e11a0 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 3.16E-24 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APA12_RS04695 602bd637ea735f9a8340719cdd7e11a0 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.16E-24 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APA12_RS04695 602bd637ea735f9a8340719cdd7e11a0 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 3.16E-24 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APA12_RS04695 602bd637ea735f9a8340719cdd7e11a0 396 PANTHER PTHR23115:SF112 1 395 3.5E-250 T 19-04-2016 APA12_RS11030 bdf6f48f118e5f4b172339e675f04298 213 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 8 206 1.5E-34 T 19-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 APA12_RS11030 bdf6f48f118e5f4b172339e675f04298 213 PANTHER PTHR22854:SF6 5 208 6.2E-47 T 19-04-2016 APA12_RS11030 bdf6f48f118e5f4b172339e675f04298 213 Gene3D G3DSA:3.20.20.70 7 208 9.3E-53 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS11030 bdf6f48f118e5f4b172339e675f04298 213 PANTHER PTHR22854 5 208 6.2E-47 T 19-04-2016 APA12_RS11030 bdf6f48f118e5f4b172339e675f04298 213 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 6 210 34.201 T 19-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 APA12_RS11030 bdf6f48f118e5f4b172339e675f04298 213 SUPERFAMILY SSF51366 8 207 1.73E-48 T 19-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APA12_RS08495 fd19ad565832752578b5cb1ddcc5515d 383 SUPERFAMILY SSF101898 63 351 8.63E-20 T 19-04-2016 APA12_RS08495 fd19ad565832752578b5cb1ddcc5515d 383 Pfam PF03022 Major royal jelly protein 126 213 1.6E-8 T 19-04-2016 IPR017996 Major royal jelly protein/Protein yellow APA12_RS08495 fd19ad565832752578b5cb1ddcc5515d 383 Gene3D G3DSA:2.120.10.30 49 380 7.9E-65 T 19-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APA12_RS05290 2d2e024d426f9f8e20494ae799ce7741 389 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 14 358 3.2E-111 T 19-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 APA12_RS05290 2d2e024d426f9f8e20494ae799ce7741 389 SUPERFAMILY SSF51246 311 360 1.18E-10 T 19-04-2016 IPR011054 Rudiment single hybrid motif APA12_RS05290 2d2e024d426f9f8e20494ae799ce7741 389 SUPERFAMILY SSF56059 109 306 1.77E-64 T 19-04-2016 APA12_RS05290 2d2e024d426f9f8e20494ae799ce7741 389 PANTHER PTHR11609:SF5 10 358 6.3E-130 T 19-04-2016 APA12_RS05290 2d2e024d426f9f8e20494ae799ce7741 389 Pfam PF02222 ATP-grasp domain 119 287 1.7E-54 T 19-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 APA12_RS05290 2d2e024d426f9f8e20494ae799ce7741 389 Gene3D G3DSA:3.30.1490.20 125 187 7.5E-21 T 19-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APA12_RS05290 2d2e024d426f9f8e20494ae799ce7741 389 Gene3D G3DSA:3.30.470.20 188 358 2.5E-61 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APA12_RS05290 2d2e024d426f9f8e20494ae799ce7741 389 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 13 362 40.93 T 19-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 APA12_RS05290 2d2e024d426f9f8e20494ae799ce7741 389 Gene3D G3DSA:3.40.50.20 9 118 1.2E-35 T 19-04-2016 IPR016185 Pre-ATP-grasp domain APA12_RS05290 2d2e024d426f9f8e20494ae799ce7741 389 PANTHER PTHR11609 10 358 6.3E-130 T 19-04-2016 APA12_RS05290 2d2e024d426f9f8e20494ae799ce7741 389 SUPERFAMILY SSF52440 6 106 2.59E-28 T 19-04-2016 IPR016185 Pre-ATP-grasp domain APA12_RS10070 35d437a3d0262613aa7beb3846b8c0ee 317 SUPERFAMILY SSF51735 4 274 4.57E-51 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS10070 35d437a3d0262613aa7beb3846b8c0ee 317 PANTHER PTHR12126:SF7 6 305 1.0E-79 T 19-04-2016 APA12_RS10070 35d437a3d0262613aa7beb3846b8c0ee 317 Gene3D G3DSA:3.40.50.720 4 228 2.4E-47 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS10070 35d437a3d0262613aa7beb3846b8c0ee 317 PANTHER PTHR12126 6 305 1.0E-79 T 19-04-2016 APA12_RS10070 35d437a3d0262613aa7beb3846b8c0ee 317 Pfam PF01370 NAD dependent epimerase/dehydratase family 8 211 3.6E-17 T 19-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 APA12_RS07655 5bc20425cb237af780726afb0f186c49 256 Gene3D G3DSA:1.20.144.10 25 231 2.6E-46 T 19-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APA12_RS07655 5bc20425cb237af780726afb0f186c49 256 PRINTS PR00483 Bacterial acid phosphatase class A signature 211 229 2.7E-29 T 19-04-2016 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 APA12_RS07655 5bc20425cb237af780726afb0f186c49 256 PRINTS PR00483 Bacterial acid phosphatase class A signature 177 201 2.7E-29 T 19-04-2016 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 APA12_RS07655 5bc20425cb237af780726afb0f186c49 256 PRINTS PR00483 Bacterial acid phosphatase class A signature 145 171 2.7E-29 T 19-04-2016 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 APA12_RS07655 5bc20425cb237af780726afb0f186c49 256 PRINTS PR00483 Bacterial acid phosphatase class A signature 56 75 2.7E-29 T 19-04-2016 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 APA12_RS07655 5bc20425cb237af780726afb0f186c49 256 PIRSF PIRSF000897 10 252 1.4E-80 T 19-04-2016 IPR011158 Nonspecific acid phosphatase, class A GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 APA12_RS07655 5bc20425cb237af780726afb0f186c49 256 SMART SM00014 104 214 9.4E-16 T 19-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APA12_RS07655 5bc20425cb237af780726afb0f186c49 256 Pfam PF01569 PAP2 superfamily 118 213 1.3E-13 T 19-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APA12_RS07655 5bc20425cb237af780726afb0f186c49 256 SUPERFAMILY SSF48317 29 229 8.5E-35 T 19-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APA12_RS13240 f4a61e889cb5a1e6ac98b8c2a1302526 261 SUPERFAMILY SSF52172 1 172 5.47E-30 T 19-04-2016 IPR011006 CheY-like superfamily APA12_RS13240 f4a61e889cb5a1e6ac98b8c2a1302526 261 Gene3D G3DSA:1.10.10.10 124 223 3.4E-27 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS13240 f4a61e889cb5a1e6ac98b8c2a1302526 261 Gene3D G3DSA:3.40.50.2300 1 121 2.4E-25 T 19-04-2016 APA12_RS13240 f4a61e889cb5a1e6ac98b8c2a1302526 261 PANTHER PTHR26402:SF553 1 232 4.0E-71 T 19-04-2016 APA12_RS13240 f4a61e889cb5a1e6ac98b8c2a1302526 261 PANTHER PTHR26402 1 232 4.0E-71 T 19-04-2016 APA12_RS13240 f4a61e889cb5a1e6ac98b8c2a1302526 261 SMART SM00448 1 112 6.0E-17 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS13240 f4a61e889cb5a1e6ac98b8c2a1302526 261 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 6.3E-20 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APA12_RS13240 f4a61e889cb5a1e6ac98b8c2a1302526 261 Pfam PF00072 Response regulator receiver domain 3 113 3.0E-17 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS13240 f4a61e889cb5a1e6ac98b8c2a1302526 261 SMART SM00862 145 220 1.5E-20 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APA12_RS10490 d140a3a4848c3ca04a5241b9d32cebd2 330 Pfam PF01618 MotA/TolQ/ExbB proton channel family 187 286 1.6E-31 T 19-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 APA12_RS10490 d140a3a4848c3ca04a5241b9d32cebd2 330 PANTHER PTHR30625 102 323 4.3E-40 T 19-04-2016 APA12_RS10490 d140a3a4848c3ca04a5241b9d32cebd2 330 PANTHER PTHR30625:SF3 102 323 4.3E-40 T 19-04-2016 APA12_RS05580 2c66c9163c7069c9c9ea39f2fada9844 1158 SMART SM00982 1010 1110 1.2E-46 T 19-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 APA12_RS05580 2c66c9163c7069c9c9ea39f2fada9844 1158 PANTHER PTHR14025:SF21 391 1157 0.0 T 19-04-2016 APA12_RS05580 2c66c9163c7069c9c9ea39f2fada9844 1158 Pfam PF00270 DEAD/DEAH box helicase 607 764 4.0E-17 T 19-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APA12_RS05580 2c66c9163c7069c9c9ea39f2fada9844 1158 PANTHER PTHR14025 391 1157 0.0 T 19-04-2016 APA12_RS05580 2c66c9163c7069c9c9ea39f2fada9844 1158 SUPERFAMILY SSF52540 526 785 3.76E-57 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05580 2c66c9163c7069c9c9ea39f2fada9844 1158 SUPERFAMILY SSF52540 373 473 2.85E-20 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05580 2c66c9163c7069c9c9ea39f2fada9844 1158 Pfam PF03461 TRCF domain 1013 1103 2.6E-28 T 19-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 APA12_RS05580 2c66c9163c7069c9c9ea39f2fada9844 1158 SUPERFAMILY SSF141259 474 550 1.14E-17 T 19-04-2016 IPR003711 CarD-like/TRCF domain APA12_RS05580 2c66c9163c7069c9c9ea39f2fada9844 1158 Gene3D G3DSA:3.40.50.300 595 788 7.0E-51 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05580 2c66c9163c7069c9c9ea39f2fada9844 1158 SUPERFAMILY SSF52540 8 345 3.54E-93 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05580 2c66c9163c7069c9c9ea39f2fada9844 1158 SUPERFAMILY SSF52540 784 992 2.24E-44 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05580 2c66c9163c7069c9c9ea39f2fada9844 1158 SMART SM00490 828 912 1.5E-19 T 19-04-2016 IPR001650 Helicase, C-terminal APA12_RS05580 2c66c9163c7069c9c9ea39f2fada9844 1158 SMART SM01058 482 578 5.0E-40 T 19-04-2016 IPR003711 CarD-like/TRCF domain APA12_RS05580 2c66c9163c7069c9c9ea39f2fada9844 1158 Gene3D G3DSA:3.40.50.300 802 965 9.3E-31 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05580 2c66c9163c7069c9c9ea39f2fada9844 1158 Gene3D G3DSA:3.30.2060.10 128 203 3.1E-12 T 19-04-2016 APA12_RS05580 2c66c9163c7069c9c9ea39f2fada9844 1158 SUPERFAMILY SSF143517 1000 1149 1.83E-37 T 19-04-2016 APA12_RS05580 2c66c9163c7069c9c9ea39f2fada9844 1158 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 144 1083 1.6E-304 T 19-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 APA12_RS05580 2c66c9163c7069c9c9ea39f2fada9844 1158 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 23 1131 27.689 T 19-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 APA12_RS05580 2c66c9163c7069c9c9ea39f2fada9844 1158 SMART SM00487 602 792 1.4E-33 T 19-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APA12_RS05580 2c66c9163c7069c9c9ea39f2fada9844 1158 Pfam PF02559 CarD-like/TRCF domain 483 576 1.9E-22 T 19-04-2016 IPR003711 CarD-like/TRCF domain APA12_RS05580 2c66c9163c7069c9c9ea39f2fada9844 1158 Pfam PF00271 Helicase conserved C-terminal domain 809 911 9.4E-17 T 19-04-2016 IPR001650 Helicase, C-terminal APA12_RS01050 66707b184dc931567dce79d790afdca7 202 PANTHER PTHR34406 17 195 1.3E-40 T 19-04-2016 APA12_RS01050 66707b184dc931567dce79d790afdca7 202 PANTHER PTHR34406:SF1 17 195 1.3E-40 T 19-04-2016 APA12_RS01050 66707b184dc931567dce79d790afdca7 202 SMART SM00867 35 199 6.5E-59 T 19-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APA12_RS01050 66707b184dc931567dce79d790afdca7 202 Pfam PF04264 YceI-like domain 36 196 2.7E-37 T 19-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APA12_RS01050 66707b184dc931567dce79d790afdca7 202 SUPERFAMILY SSF101874 34 201 4.45E-49 T 19-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APA12_RS01050 66707b184dc931567dce79d790afdca7 202 Gene3D G3DSA:2.40.128.110 34 201 7.5E-54 T 19-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APA12_RS03820 ac0dae61567d333284dfcf07a82ef971 208 SUPERFAMILY SSF102405 73 197 7.2E-25 T 19-04-2016 APA12_RS03820 ac0dae61567d333284dfcf07a82ef971 208 PANTHER PTHR32039:SF8 8 201 1.9E-44 T 19-04-2016 APA12_RS03820 ac0dae61567d333284dfcf07a82ef971 208 PANTHER PTHR32039 8 201 1.9E-44 T 19-04-2016 APA12_RS03820 ac0dae61567d333284dfcf07a82ef971 208 Gene3D G3DSA:3.40.50.450 107 169 7.0E-9 T 19-04-2016 APA12_RS03820 ac0dae61567d333284dfcf07a82ef971 208 Pfam PF02481 DNA recombination-mediator protein A 70 201 3.6E-43 T 19-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 APA12_RS03360 b511cf066eed5347600e77241f148adf 126 SUPERFAMILY SSF54211 16 122 2.78E-24 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APA12_RS03360 b511cf066eed5347600e77241f148adf 126 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 14 125 16.002 T 19-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 APA12_RS03360 b511cf066eed5347600e77241f148adf 126 Pfam PF00825 Ribonuclease P 16 120 3.7E-21 T 19-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 APA12_RS03360 b511cf066eed5347600e77241f148adf 126 Gene3D G3DSA:3.30.230.10 16 122 3.0E-28 T 19-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APA12_RS03360 b511cf066eed5347600e77241f148adf 126 PANTHER PTHR33992 10 119 8.6E-20 T 19-04-2016 APA12_RS03360 b511cf066eed5347600e77241f148adf 126 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 18 123 5.0E-18 T 19-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 APA12_RS03360 b511cf066eed5347600e77241f148adf 126 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 30 100 4.0E-5 T 19-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 APA12_RS13500 45d00d48f1f6d633c3508b0929cdc5d8 626 Pfam PF13932 GidA associated domain 404 612 1.0E-58 T 19-04-2016 IPR026904 GidA associated domain 3 APA12_RS13500 45d00d48f1f6d633c3508b0929cdc5d8 626 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 271 285 - T 19-04-2016 IPR020595 MnmG-related, conserved site APA12_RS13500 45d00d48f1f6d633c3508b0929cdc5d8 626 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 5 618 1.1E-234 T 19-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 APA12_RS13500 45d00d48f1f6d633c3508b0929cdc5d8 626 Gene3D G3DSA:3.50.50.60 2 193 5.1E-37 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS13500 45d00d48f1f6d633c3508b0929cdc5d8 626 SMART SM01228 543 614 3.8E-29 T 19-04-2016 APA12_RS13500 45d00d48f1f6d633c3508b0929cdc5d8 626 SUPERFAMILY SSF51905 2 64 1.79E-43 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS13500 45d00d48f1f6d633c3508b0929cdc5d8 626 SUPERFAMILY SSF51905 95 258 1.79E-43 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS13500 45d00d48f1f6d633c3508b0929cdc5d8 626 PANTHER PTHR11806 1 620 0.0 T 19-04-2016 APA12_RS13500 45d00d48f1f6d633c3508b0929cdc5d8 626 PANTHER PTHR11806:SF0 1 620 0.0 T 19-04-2016 APA12_RS13500 45d00d48f1f6d633c3508b0929cdc5d8 626 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 370 393 - T 19-04-2016 IPR020595 MnmG-related, conserved site APA12_RS13500 45d00d48f1f6d633c3508b0929cdc5d8 626 Gene3D G3DSA:3.50.50.60 480 561 6.3E-5 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS13500 45d00d48f1f6d633c3508b0929cdc5d8 626 Pfam PF01134 Glucose inhibited division protein A 6 400 5.9E-156 T 19-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 APA12_RS13500 45d00d48f1f6d633c3508b0929cdc5d8 626 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 3 621 39.004 T 19-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 APA12_RS11735 25ec563503150fc7d157a9e8e769d0c8 951 PANTHER PTHR10683 8 399 4.8E-114 T 19-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APA12_RS11735 25ec563503150fc7d157a9e8e769d0c8 951 TIGRFAM TIGR00876 tal_mycobact: transaldolase 21 371 1.3E-92 T 19-04-2016 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APA12_RS11735 25ec563503150fc7d157a9e8e769d0c8 951 Hamap MF_00493 Transaldolase [tal]. 1 383 121.546 T 19-04-2016 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APA12_RS11735 25ec563503150fc7d157a9e8e769d0c8 951 Pfam PF00923 Transaldolase 23 372 1.9E-76 T 19-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APA12_RS11735 25ec563503150fc7d157a9e8e769d0c8 951 SUPERFAMILY SSF51569 12 376 1.83E-67 T 19-04-2016 APA12_RS11735 25ec563503150fc7d157a9e8e769d0c8 951 Gene3D G3DSA:3.40.50.10490 456 575 1.4E-26 T 19-04-2016 APA12_RS11735 25ec563503150fc7d157a9e8e769d0c8 951 Gene3D G3DSA:3.40.50.10490 576 680 2.9E-26 T 19-04-2016 APA12_RS11735 25ec563503150fc7d157a9e8e769d0c8 951 Gene3D G3DSA:3.40.50.10490 852 943 2.4E-11 T 19-04-2016 APA12_RS11735 25ec563503150fc7d157a9e8e769d0c8 951 SUPERFAMILY SSF53697 310 788 1.9E-78 T 19-04-2016 APA12_RS11735 25ec563503150fc7d157a9e8e769d0c8 951 Gene3D G3DSA:3.40.50.10490 700 782 1.6E-11 T 19-04-2016 APA12_RS11735 25ec563503150fc7d157a9e8e769d0c8 951 Pfam PF00342 Phosphoglucose isomerase 461 673 5.8E-17 T 19-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APA12_RS11735 25ec563503150fc7d157a9e8e769d0c8 951 Gene3D G3DSA:3.20.20.70 10 373 2.4E-105 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS11735 25ec563503150fc7d157a9e8e769d0c8 951 ProSitePatterns PS01054 Transaldolase signature 1. 48 56 - T 19-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APA12_RS11735 25ec563503150fc7d157a9e8e769d0c8 951 PRINTS PR00662 Glucose-6-phosphate isomerase signature 651 672 2.5E-8 T 19-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APA12_RS11735 25ec563503150fc7d157a9e8e769d0c8 951 PRINTS PR00662 Glucose-6-phosphate isomerase signature 575 593 2.5E-8 T 19-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APA12_RS11735 25ec563503150fc7d157a9e8e769d0c8 951 PRINTS PR00662 Glucose-6-phosphate isomerase signature 464 483 2.5E-8 T 19-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APA12_RS11735 25ec563503150fc7d157a9e8e769d0c8 951 PANTHER PTHR10683:SF12 8 399 4.8E-114 T 19-04-2016 APA12_RS05205 0baee0240c5c1a19b17f5030ce9697b0 119 PANTHER PTHR10986:SF12 2 117 4.2E-58 T 19-04-2016 APA12_RS05205 0baee0240c5c1a19b17f5030ce9697b0 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 72 3.0E-23 T 19-04-2016 APA12_RS05205 0baee0240c5c1a19b17f5030ce9697b0 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 9.9E-38 T 19-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APA12_RS05205 0baee0240c5c1a19b17f5030ce9697b0 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 9.9E-38 T 19-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APA12_RS05205 0baee0240c5c1a19b17f5030ce9697b0 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 9.9E-38 T 19-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APA12_RS05205 0baee0240c5c1a19b17f5030ce9697b0 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.099 T 19-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APA12_RS05205 0baee0240c5c1a19b17f5030ce9697b0 119 Gene3D G3DSA:1.10.1900.20 55 117 1.2E-29 T 19-04-2016 APA12_RS05205 0baee0240c5c1a19b17f5030ce9697b0 119 PANTHER PTHR10986 2 117 4.2E-58 T 19-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APA12_RS05205 0baee0240c5c1a19b17f5030ce9697b0 119 Pfam PF00453 Ribosomal protein L20 3 109 1.9E-47 T 19-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APA12_RS05205 0baee0240c5c1a19b17f5030ce9697b0 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 113 1.2E-47 T 19-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APA12_RS05205 0baee0240c5c1a19b17f5030ce9697b0 119 SUPERFAMILY SSF74731 3 117 2.75E-47 T 19-04-2016 APA12_RS05205 0baee0240c5c1a19b17f5030ce9697b0 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 19-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APA12_RS12540 6a48e7d1ee6d89275381449c625e35c3 586 Gene3D G3DSA:3.40.50.300 7 218 2.2E-64 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS12540 6a48e7d1ee6d89275381449c625e35c3 586 SMART SM00487 18 221 2.4E-50 T 19-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APA12_RS12540 6a48e7d1ee6d89275381449c625e35c3 586 Gene3D G3DSA:3.40.50.300 219 363 3.4E-41 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS12540 6a48e7d1ee6d89275381449c625e35c3 586 Pfam PF03880 DbpA RNA binding domain 468 523 1.3E-14 T 19-04-2016 IPR005580 DbpA, RNA-binding domain APA12_RS12540 6a48e7d1ee6d89275381449c625e35c3 586 SMART SM00490 257 338 1.1E-28 T 19-04-2016 IPR001650 Helicase, C-terminal APA12_RS12540 6a48e7d1ee6d89275381449c625e35c3 586 SUPERFAMILY SSF52540 74 356 6.42E-66 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS12540 6a48e7d1ee6d89275381449c625e35c3 586 Pfam PF00270 DEAD/DEAH box helicase 23 193 3.0E-42 T 19-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APA12_RS12540 6a48e7d1ee6d89275381449c625e35c3 586 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 19-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site APA12_RS12540 6a48e7d1ee6d89275381449c625e35c3 586 Pfam PF00271 Helicase conserved C-terminal domain 241 338 3.2E-24 T 19-04-2016 IPR001650 Helicase, C-terminal APA12_RS12540 6a48e7d1ee6d89275381449c625e35c3 586 PANTHER PTHR24031 7 365 7.2E-130 T 19-04-2016 APA12_RS11160 88ce061943a0d3b3aacf060ae2b026cc 158 SMART SM00903 15 157 7.7E-43 T 19-04-2016 IPR002563 Flavin reductase like domain GO:0010181 APA12_RS11160 88ce061943a0d3b3aacf060ae2b026cc 158 PANTHER PTHR30466 1 155 1.2E-29 T 19-04-2016 APA12_RS11160 88ce061943a0d3b3aacf060ae2b026cc 158 Gene3D G3DSA:2.30.110.10 7 155 2.6E-43 T 19-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APA12_RS11160 88ce061943a0d3b3aacf060ae2b026cc 158 Pfam PF01613 Flavin reductase like domain 15 156 1.2E-31 T 19-04-2016 IPR002563 Flavin reductase like domain GO:0010181 APA12_RS11160 88ce061943a0d3b3aacf060ae2b026cc 158 SUPERFAMILY SSF50475 9 156 4.8E-38 T 19-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APA12_RS11160 88ce061943a0d3b3aacf060ae2b026cc 158 PANTHER PTHR30466:SF2 1 155 1.2E-29 T 19-04-2016 APA12_RS07450 826434e5d627dc56f8f80ff6c46aa3b3 565 PANTHER PTHR11938:SF108 35 428 3.0E-62 T 19-04-2016 APA12_RS07450 826434e5d627dc56f8f80ff6c46aa3b3 565 PRINTS PR00419 Adrenodoxin reductase family signature 149 162 3.2E-16 T 19-04-2016 APA12_RS07450 826434e5d627dc56f8f80ff6c46aa3b3 565 PRINTS PR00419 Adrenodoxin reductase family signature 126 148 3.2E-16 T 19-04-2016 APA12_RS07450 826434e5d627dc56f8f80ff6c46aa3b3 565 PRINTS PR00419 Adrenodoxin reductase family signature 257 271 3.2E-16 T 19-04-2016 APA12_RS07450 826434e5d627dc56f8f80ff6c46aa3b3 565 SUPERFAMILY SSF46548 35 135 2.77E-22 T 19-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APA12_RS07450 826434e5d627dc56f8f80ff6c46aa3b3 565 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 490 501 - T 19-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APA12_RS07450 826434e5d627dc56f8f80ff6c46aa3b3 565 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 521 532 - T 19-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APA12_RS07450 826434e5d627dc56f8f80ff6c46aa3b3 565 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 35 114 3.2E-16 T 19-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II APA12_RS07450 826434e5d627dc56f8f80ff6c46aa3b3 565 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 125 411 1.1E-29 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS07450 826434e5d627dc56f8f80ff6c46aa3b3 565 Gene3D G3DSA:1.10.1060.10 439 540 2.2E-14 T 19-04-2016 APA12_RS07450 826434e5d627dc56f8f80ff6c46aa3b3 565 Gene3D G3DSA:1.10.1060.10 35 127 9.4E-26 T 19-04-2016 APA12_RS07450 826434e5d627dc56f8f80ff6c46aa3b3 565 SUPERFAMILY SSF51971 123 356 1.65E-47 T 19-04-2016 APA12_RS07450 826434e5d627dc56f8f80ff6c46aa3b3 565 Gene3D G3DSA:3.50.50.60 128 214 9.6E-18 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS07450 826434e5d627dc56f8f80ff6c46aa3b3 565 Gene3D G3DSA:3.50.50.60 347 434 4.9E-12 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS07450 826434e5d627dc56f8f80ff6c46aa3b3 565 Gene3D G3DSA:3.50.50.60 215 346 3.4E-33 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS07450 826434e5d627dc56f8f80ff6c46aa3b3 565 PANTHER PTHR11938 35 428 3.0E-62 T 19-04-2016 APA12_RS07450 826434e5d627dc56f8f80ff6c46aa3b3 565 SUPERFAMILY SSF54862 27 50 7.95E-14 T 19-04-2016 APA12_RS07450 826434e5d627dc56f8f80ff6c46aa3b3 565 SUPERFAMILY SSF54862 457 545 7.95E-14 T 19-04-2016 APA12_RS03035 ebb283469693628db534fbe41065f39f 351 SMART SM00320 220 258 9.7 T 19-04-2016 IPR001680 WD40 repeat GO:0005515 APA12_RS03035 ebb283469693628db534fbe41065f39f 351 SMART SM00320 139 176 2.7 T 19-04-2016 IPR001680 WD40 repeat GO:0005515 APA12_RS03035 ebb283469693628db534fbe41065f39f 351 SMART SM00320 308 347 11.0 T 19-04-2016 IPR001680 WD40 repeat GO:0005515 APA12_RS03035 ebb283469693628db534fbe41065f39f 351 SMART SM00320 265 305 6.8 T 19-04-2016 IPR001680 WD40 repeat GO:0005515 APA12_RS03035 ebb283469693628db534fbe41065f39f 351 SMART SM00320 56 95 11.0 T 19-04-2016 IPR001680 WD40 repeat GO:0005515 APA12_RS03035 ebb283469693628db534fbe41065f39f 351 Pfam PF00400 WD domain, G-beta repeat 229 252 0.029 T 19-04-2016 IPR001680 WD40 repeat GO:0005515 APA12_RS03035 ebb283469693628db534fbe41065f39f 351 Gene3D G3DSA:2.130.10.10 206 349 2.9E-21 T 19-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APA12_RS03035 ebb283469693628db534fbe41065f39f 351 SUPERFAMILY SSF50998 33 348 2.12E-37 T 19-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APA12_RS03035 ebb283469693628db534fbe41065f39f 351 Gene3D G3DSA:2.130.10.10 20 205 8.1E-18 T 19-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APA12_RS05325 e11919fa364d7ad17f3b55807e177986 159 PANTHER PTHR30266:SF2 8 151 1.5E-52 T 19-04-2016 APA12_RS05325 e11919fa364d7ad17f3b55807e177986 159 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 15 147 4.5E-43 T 19-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APA12_RS05325 e11919fa364d7ad17f3b55807e177986 159 PANTHER PTHR30266 8 151 1.5E-52 T 19-04-2016 APA12_RS05325 e11919fa364d7ad17f3b55807e177986 159 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 13 151 25.173 T 19-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APA12_RS05325 e11919fa364d7ad17f3b55807e177986 159 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 15 148 3.0E-40 T 19-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APA12_RS05325 e11919fa364d7ad17f3b55807e177986 159 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 23 36 - T 19-04-2016 IPR019823 Large-conductance mechanosensitive channel, conserved site APA12_RS05325 e11919fa364d7ad17f3b55807e177986 159 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 110 119 6.3E-9 T 19-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APA12_RS05325 e11919fa364d7ad17f3b55807e177986 159 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 101 109 6.3E-9 T 19-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APA12_RS05325 e11919fa364d7ad17f3b55807e177986 159 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 16 30 6.3E-9 T 19-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APA12_RS05325 e11919fa364d7ad17f3b55807e177986 159 SUPERFAMILY SSF81330 22 144 9.29E-35 T 19-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APA12_RS11470 55b9f08c1f88462c193fae1ed27de65a 264 PANTHER PTHR30477 1 262 1.1E-36 T 19-04-2016 APA12_RS11470 55b9f08c1f88462c193fae1ed27de65a 264 Gene3D G3DSA:1.10.3470.10 44 254 2.0E-4 T 19-04-2016 IPR029022 ABC transporter, BtuC-like APA12_RS11470 55b9f08c1f88462c193fae1ed27de65a 264 SUPERFAMILY SSF81345 3 254 4.18E-30 T 19-04-2016 IPR029022 ABC transporter, BtuC-like APA12_RS11470 55b9f08c1f88462c193fae1ed27de65a 264 PANTHER PTHR30477:SF0 1 262 1.1E-36 T 19-04-2016 APA12_RS11470 55b9f08c1f88462c193fae1ed27de65a 264 Pfam PF00950 ABC 3 transport family 4 258 1.8E-41 T 19-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 APA12_RS10600 9c9c9955a653ce5676aad80664693335 284 SUPERFAMILY SSF51735 41 282 6.16E-82 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS10600 9c9c9955a653ce5676aad80664693335 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 118 129 8.7E-9 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS10600 9c9c9955a653ce5676aad80664693335 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 190 209 8.7E-9 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS10600 9c9c9955a653ce5676aad80664693335 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 170 178 8.7E-9 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS10600 9c9c9955a653ce5676aad80664693335 284 PANTHER PTHR24322:SF564 46 174 2.7E-61 T 19-04-2016 APA12_RS10600 9c9c9955a653ce5676aad80664693335 284 PANTHER PTHR24322:SF564 190 222 2.7E-61 T 19-04-2016 APA12_RS10600 9c9c9955a653ce5676aad80664693335 284 Gene3D G3DSA:3.40.50.720 37 281 3.8E-84 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS10600 9c9c9955a653ce5676aad80664693335 284 PANTHER PTHR24322 46 174 2.7E-61 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS10600 9c9c9955a653ce5676aad80664693335 284 PANTHER PTHR24322 190 222 2.7E-61 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS10600 9c9c9955a653ce5676aad80664693335 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 190 209 9.4E-36 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS10600 9c9c9955a653ce5676aad80664693335 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 118 129 9.4E-36 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS10600 9c9c9955a653ce5676aad80664693335 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 180 9.4E-36 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS10600 9c9c9955a653ce5676aad80664693335 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 228 9.4E-36 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS10600 9c9c9955a653ce5676aad80664693335 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 245 265 9.4E-36 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS10600 9c9c9955a653ce5676aad80664693335 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 43 60 9.4E-36 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS10600 9c9c9955a653ce5676aad80664693335 284 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 177 205 - T 19-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APA12_RS10600 9c9c9955a653ce5676aad80664693335 284 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 48 280 3.8E-63 T 19-04-2016 APA12_RS09265 0883ff2ca531541ea252859383d308be 328 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 21 323 2.3E-131 T 19-04-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 APA12_RS09265 0883ff2ca531541ea252859383d308be 328 Gene3D G3DSA:3.40.50.1820 20 310 8.8E-73 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS09265 0883ff2ca531541ea252859383d308be 328 PRINTS PR00111 Alpha/beta hydrolase fold signature 132 145 7.0E-6 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APA12_RS09265 0883ff2ca531541ea252859383d308be 328 PRINTS PR00111 Alpha/beta hydrolase fold signature 118 131 7.0E-6 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APA12_RS09265 0883ff2ca531541ea252859383d308be 328 PRINTS PR00111 Alpha/beta hydrolase fold signature 72 87 7.0E-6 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APA12_RS09265 0883ff2ca531541ea252859383d308be 328 PIRSF PIRSF006431 12 327 1.5E-140 T 19-04-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 APA12_RS09265 0883ff2ca531541ea252859383d308be 328 PANTHER PTHR10992 14 186 1.2E-135 T 19-04-2016 APA12_RS09265 0883ff2ca531541ea252859383d308be 328 PANTHER PTHR10992 224 323 1.2E-135 T 19-04-2016 APA12_RS09265 0883ff2ca531541ea252859383d308be 328 Pfam PF00561 alpha/beta hydrolase fold 48 309 1.5E-35 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APA12_RS09265 0883ff2ca531541ea252859383d308be 328 SUPERFAMILY SSF53474 15 309 1.08E-66 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS09265 0883ff2ca531541ea252859383d308be 328 PANTHER PTHR10992:SF860 14 186 1.2E-135 T 19-04-2016 APA12_RS09265 0883ff2ca531541ea252859383d308be 328 PANTHER PTHR10992:SF860 224 323 1.2E-135 T 19-04-2016 APA12_RS09265 0883ff2ca531541ea252859383d308be 328 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 49 57 1.9E-14 T 19-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 APA12_RS09265 0883ff2ca531541ea252859383d308be 328 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 75 86 1.9E-14 T 19-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 APA12_RS09265 0883ff2ca531541ea252859383d308be 328 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 118 132 1.9E-14 T 19-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 APA12_RS00965 e253d7cd63f2e3850755eb0c2185b121 509 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 16 482 1.2E-95 T 19-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 APA12_RS00965 e253d7cd63f2e3850755eb0c2185b121 509 Gene3D G3DSA:1.20.1600.10 65 484 8.3E-89 T 19-04-2016 APA12_RS00965 e253d7cd63f2e3850755eb0c2185b121 509 SUPERFAMILY SSF56954 66 483 3.14E-92 T 19-04-2016 APA12_RS00965 e253d7cd63f2e3850755eb0c2185b121 509 SUPERFAMILY SSF56954 4 38 3.14E-92 T 19-04-2016 APA12_RS00965 e253d7cd63f2e3850755eb0c2185b121 509 Pfam PF02321 Outer membrane efflux protein 296 480 1.6E-19 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APA12_RS00965 e253d7cd63f2e3850755eb0c2185b121 509 Pfam PF02321 Outer membrane efflux protein 76 251 1.0E-22 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APA12_RS00965 e253d7cd63f2e3850755eb0c2185b121 509 PANTHER PTHR30203 1 501 8.0E-100 T 19-04-2016 APA12_RS00965 e253d7cd63f2e3850755eb0c2185b121 509 PANTHER PTHR30203:SF3 1 501 8.0E-100 T 19-04-2016 APA12_RS09840 612f90ba1fd03b15f9fee0c23f2ddc5b 334 Pfam PF00490 Delta-aminolevulinic acid dehydratase 9 326 2.6E-139 T 19-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APA12_RS09840 612f90ba1fd03b15f9fee0c23f2ddc5b 334 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 247 259 - T 19-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APA12_RS09840 612f90ba1fd03b15f9fee0c23f2ddc5b 334 SMART SM01004 6 328 2.0E-231 T 19-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APA12_RS09840 612f90ba1fd03b15f9fee0c23f2ddc5b 334 PANTHER PTHR11458 6 329 4.1E-183 T 19-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APA12_RS09840 612f90ba1fd03b15f9fee0c23f2ddc5b 334 SUPERFAMILY SSF51569 5 329 2.2E-140 T 19-04-2016 APA12_RS09840 612f90ba1fd03b15f9fee0c23f2ddc5b 334 PIRSF PIRSF001415 1 331 2.5E-145 T 19-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APA12_RS09840 612f90ba1fd03b15f9fee0c23f2ddc5b 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 194 213 6.0E-58 T 19-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APA12_RS09840 612f90ba1fd03b15f9fee0c23f2ddc5b 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 247 263 6.0E-58 T 19-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APA12_RS09840 612f90ba1fd03b15f9fee0c23f2ddc5b 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 302 321 6.0E-58 T 19-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APA12_RS09840 612f90ba1fd03b15f9fee0c23f2ddc5b 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 272 287 6.0E-58 T 19-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APA12_RS09840 612f90ba1fd03b15f9fee0c23f2ddc5b 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 126 140 6.0E-58 T 19-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APA12_RS09840 612f90ba1fd03b15f9fee0c23f2ddc5b 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 156 175 6.0E-58 T 19-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APA12_RS09840 612f90ba1fd03b15f9fee0c23f2ddc5b 334 Gene3D G3DSA:3.20.20.70 5 329 7.4E-145 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS03250 be5444a9d8bc00008295fb9e9a361f25 170 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 11 142 1.1E-31 T 19-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APA12_RS03250 be5444a9d8bc00008295fb9e9a361f25 170 Gene3D G3DSA:3.30.70.560 9 164 1.6E-49 T 19-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APA12_RS03250 be5444a9d8bc00008295fb9e9a361f25 170 PANTHER PTHR20941 8 158 3.7E-49 T 19-04-2016 APA12_RS03250 be5444a9d8bc00008295fb9e9a361f25 170 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 10 142 6.1E-35 T 19-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APA12_RS03250 be5444a9d8bc00008295fb9e9a361f25 170 SUPERFAMILY SSF55083 8 164 3.4E-46 T 19-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APA12_RS01150 1035099a8fdeaf5280a7cdcd313da75b 518 PANTHER PTHR11573 363 475 5.6E-34 T 19-04-2016 APA12_RS01150 1035099a8fdeaf5280a7cdcd313da75b 518 PANTHER PTHR11573:SF18 363 475 5.6E-34 T 19-04-2016 APA12_RS09655 c2dd7a4531e361119bea87d7f70bc4ef 312 Pfam PF01820 D-ala D-ala ligase N-terminus 6 89 5.4E-22 T 19-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APA12_RS09655 c2dd7a4531e361119bea87d7f70bc4ef 312 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 247 279 - T 19-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APA12_RS09655 c2dd7a4531e361119bea87d7f70bc4ef 312 Pfam PF07478 D-ala D-ala ligase C-terminus 110 306 2.1E-41 T 19-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APA12_RS09655 c2dd7a4531e361119bea87d7f70bc4ef 312 Gene3D G3DSA:3.30.470.20 91 108 1.2E-43 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APA12_RS09655 c2dd7a4531e361119bea87d7f70bc4ef 312 Gene3D G3DSA:3.30.470.20 177 308 1.2E-43 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APA12_RS09655 c2dd7a4531e361119bea87d7f70bc4ef 312 SUPERFAMILY SSF52440 5 101 1.53E-29 T 19-04-2016 IPR016185 Pre-ATP-grasp domain APA12_RS09655 c2dd7a4531e361119bea87d7f70bc4ef 312 SUPERFAMILY SSF56059 101 311 1.29E-48 T 19-04-2016 APA12_RS09655 c2dd7a4531e361119bea87d7f70bc4ef 312 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 6 308 4.1E-84 T 19-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APA12_RS09655 c2dd7a4531e361119bea87d7f70bc4ef 312 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 5 309 33.338 T 19-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APA12_RS09655 c2dd7a4531e361119bea87d7f70bc4ef 312 Gene3D G3DSA:3.40.50.20 5 89 9.1E-29 T 19-04-2016 IPR016185 Pre-ATP-grasp domain APA12_RS09655 c2dd7a4531e361119bea87d7f70bc4ef 312 PIRSF PIRSF039102 41 312 3.2E-71 T 19-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APA12_RS09655 c2dd7a4531e361119bea87d7f70bc4ef 312 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 68 79 - T 19-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APA12_RS09655 c2dd7a4531e361119bea87d7f70bc4ef 312 Gene3D G3DSA:3.30.1490.20 112 176 1.0E-13 T 19-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APA12_RS09655 c2dd7a4531e361119bea87d7f70bc4ef 312 PANTHER PTHR23132 1 308 2.7E-76 T 19-04-2016 APA12_RS08665 e6fc4b05f55f133572aadb5ce1a1da80 374 SUPERFAMILY SSF53659 5 371 3.96E-114 T 19-04-2016 APA12_RS08665 e6fc4b05f55f133572aadb5ce1a1da80 374 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 11 365 2.7E-127 T 19-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APA12_RS08665 e6fc4b05f55f133572aadb5ce1a1da80 374 PANTHER PTHR11835:SF35 8 374 1.3E-178 T 19-04-2016 APA12_RS08665 e6fc4b05f55f133572aadb5ce1a1da80 374 PANTHER PTHR11835 8 374 1.3E-178 T 19-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 APA12_RS08665 e6fc4b05f55f133572aadb5ce1a1da80 374 SMART SM01329 10 365 1.1E-184 T 19-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APA12_RS08665 e6fc4b05f55f133572aadb5ce1a1da80 374 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 9 369 49.375 T 19-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 APA12_RS08665 e6fc4b05f55f133572aadb5ce1a1da80 374 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 251 270 - T 19-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 APA12_RS08665 e6fc4b05f55f133572aadb5ce1a1da80 374 Gene3D G3DSA:3.40.718.10 8 370 1.4E-121 T 19-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APA12_RS08665 e6fc4b05f55f133572aadb5ce1a1da80 374 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 11 365 1.3E-140 T 19-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 APA12_RS05180 6a78e834e8650a87f4ffa0ee1da0c6cd 775 SUPERFAMILY SSF56003 339 771 1.86E-118 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APA12_RS05180 6a78e834e8650a87f4ffa0ee1da0c6cd 775 PANTHER PTHR11908:SF2 73 775 3.5E-133 T 19-04-2016 APA12_RS05180 6a78e834e8650a87f4ffa0ee1da0c6cd 775 Gene3D G3DSA:3.30.365.10 566 771 1.3E-45 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APA12_RS05180 6a78e834e8650a87f4ffa0ee1da0c6cd 775 Gene3D G3DSA:3.30.365.10 408 565 2.4E-26 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APA12_RS05180 6a78e834e8650a87f4ffa0ee1da0c6cd 775 PANTHER PTHR11908 73 775 3.5E-133 T 19-04-2016 APA12_RS05180 6a78e834e8650a87f4ffa0ee1da0c6cd 775 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 340 582 3.5E-30 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APA12_RS05180 6a78e834e8650a87f4ffa0ee1da0c6cd 775 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 599 715 4.3E-18 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APA12_RS05180 6a78e834e8650a87f4ffa0ee1da0c6cd 775 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 20 186 2.6E-13 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APA12_RS05180 6a78e834e8650a87f4ffa0ee1da0c6cd 775 SUPERFAMILY SSF56003 30 254 2.72E-37 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APA12_RS05180 6a78e834e8650a87f4ffa0ee1da0c6cd 775 PIRSF PIRSF036389 9 768 8.9E-240 T 19-04-2016 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related APA12_RS05180 6a78e834e8650a87f4ffa0ee1da0c6cd 775 SMART SM01008 223 309 6.8E-18 T 19-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APA12_RS05180 6a78e834e8650a87f4ffa0ee1da0c6cd 775 Gene3D G3DSA:3.30.365.10 62 185 1.4E-32 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APA12_RS05180 6a78e834e8650a87f4ffa0ee1da0c6cd 775 Gene3D G3DSA:3.90.1170.50 196 296 1.4E-15 T 19-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APA12_RS05180 6a78e834e8650a87f4ffa0ee1da0c6cd 775 Gene3D G3DSA:3.30.365.10 297 361 3.0E-4 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APA12_RS10315 ea00edf82debc9dcc827c86a7ac21277 249 Gene3D G3DSA:2.10.109.10 143 245 8.1E-12 T 19-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain APA12_RS10315 ea00edf82debc9dcc827c86a7ac21277 249 Gene3D G3DSA:1.10.260.40 5 34 2.5E-4 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APA12_RS10315 ea00edf82debc9dcc827c86a7ac21277 249 Pfam PF00717 Peptidase S24-like 162 223 1.9E-7 T 19-04-2016 IPR019759 Peptidase S24/S26A/S26B APA12_RS10315 ea00edf82debc9dcc827c86a7ac21277 249 SUPERFAMILY SSF51306 143 246 2.62E-15 T 19-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C APA12_RS04745 383f5e63eb1ee7889eace6536a3cc1fb 78 SUPERFAMILY SSF46561 5 63 1.7E-18 T 19-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04745 383f5e63eb1ee7889eace6536a3cc1fb 78 Pfam PF00831 Ribosomal L29 protein 9 61 2.0E-21 T 19-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04745 383f5e63eb1ee7889eace6536a3cc1fb 78 PANTHER PTHR10916 3 60 3.9E-20 T 19-04-2016 APA12_RS04745 383f5e63eb1ee7889eace6536a3cc1fb 78 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 5 64 15.828 T 19-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04745 383f5e63eb1ee7889eace6536a3cc1fb 78 Gene3D G3DSA:1.10.287.310 6 63 5.6E-24 T 19-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04745 383f5e63eb1ee7889eace6536a3cc1fb 78 TIGRFAM TIGR00012 L29: ribosomal protein uL29 9 61 5.2E-19 T 19-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS12735 a1a18162c7d270ba661308359298c044 253 Pfam PF00005 ABC transporter 24 178 2.9E-33 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS12735 a1a18162c7d270ba661308359298c044 253 PANTHER PTHR24220 8 253 6.2E-114 T 19-04-2016 APA12_RS12735 a1a18162c7d270ba661308359298c044 253 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APA12_RS12735 a1a18162c7d270ba661308359298c044 253 PANTHER PTHR24220:SF327 8 253 6.2E-114 T 19-04-2016 APA12_RS12735 a1a18162c7d270ba661308359298c044 253 SMART SM00382 31 226 7.8E-12 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS12735 a1a18162c7d270ba661308359298c044 253 Gene3D G3DSA:3.40.50.300 6 249 8.4E-78 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS12735 a1a18162c7d270ba661308359298c044 253 SUPERFAMILY SSF52540 7 248 4.76E-72 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS12735 a1a18162c7d270ba661308359298c044 253 PIRSF PIRSF039085 3 253 2.2E-100 T 19-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 APA12_RS10375 28d570a81106d8acf7a64bf99a2145a6 335 Gene3D G3DSA:1.10.150.130 97 159 1.5E-4 T 19-04-2016 IPR023109 Integrase/recombinase, N-terminal APA12_RS10375 28d570a81106d8acf7a64bf99a2145a6 335 PANTHER PTHR30349 61 331 2.5E-32 T 19-04-2016 APA12_RS10375 28d570a81106d8acf7a64bf99a2145a6 335 SUPERFAMILY SSF56349 62 332 1.79E-48 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APA12_RS10375 28d570a81106d8acf7a64bf99a2145a6 335 Pfam PF00589 Phage integrase family 190 325 2.2E-18 T 19-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APA12_RS10375 28d570a81106d8acf7a64bf99a2145a6 335 PANTHER PTHR30349:SF20 61 331 2.5E-32 T 19-04-2016 APA12_RS10375 28d570a81106d8acf7a64bf99a2145a6 335 Gene3D G3DSA:1.10.443.10 164 333 1.6E-31 T 19-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APA12_RS02525 56e7979f42ab727c63a0e066583b42de 483 SUPERFAMILY SSF51294 142 278 1.78E-9 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS02525 56e7979f42ab727c63a0e066583b42de 483 Pfam PF13403 Hint domain 141 280 1.0E-39 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS04350 c80cf9d8cdd90af3549aa0200e0f3b73 110 PANTHER PTHR33154 1 105 6.6E-30 T 19-04-2016 APA12_RS04350 c80cf9d8cdd90af3549aa0200e0f3b73 110 PANTHER PTHR33154:SF2 1 105 6.6E-30 T 19-04-2016 APA12_RS04350 c80cf9d8cdd90af3549aa0200e0f3b73 110 Gene3D G3DSA:1.10.10.10 6 93 4.0E-12 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS04350 c80cf9d8cdd90af3549aa0200e0f3b73 110 SMART SM00418 16 93 4.5E-5 T 19-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APA12_RS04350 c80cf9d8cdd90af3549aa0200e0f3b73 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 1.2E-6 T 19-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APA12_RS04350 c80cf9d8cdd90af3549aa0200e0f3b73 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 1.2E-6 T 19-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APA12_RS04350 c80cf9d8cdd90af3549aa0200e0f3b73 110 SUPERFAMILY SSF46785 4 92 3.06E-13 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS04350 c80cf9d8cdd90af3549aa0200e0f3b73 110 Pfam PF12840 Helix-turn-helix domain 17 72 4.5E-10 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS06245 2e9840768090672433c91a73ea8cdb4c 159 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 11 156 34.493 T 19-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 APA12_RS06245 2e9840768090672433c91a73ea8cdb4c 159 Gene3D G3DSA:2.70.40.10 12 156 5.4E-57 T 19-04-2016 IPR029054 dUTPase-like APA12_RS06245 2e9840768090672433c91a73ea8cdb4c 159 SUPERFAMILY SSF51283 13 156 1.57E-53 T 19-04-2016 IPR029054 dUTPase-like APA12_RS06245 2e9840768090672433c91a73ea8cdb4c 159 PANTHER PTHR11241 22 158 5.8E-54 T 19-04-2016 APA12_RS06245 2e9840768090672433c91a73ea8cdb4c 159 TIGRFAM TIGR00576 dut: dUTP diphosphatase 15 155 2.7E-53 T 19-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 APA12_RS06245 2e9840768090672433c91a73ea8cdb4c 159 Pfam PF00692 dUTPase 25 155 2.3E-30 T 19-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 APA12_RS05780 43c9f8a4c22215a13901c07fcea2fa45 214 SUPERFAMILY SSF52540 3 209 1.2E-50 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05780 43c9f8a4c22215a13901c07fcea2fa45 214 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 201 1.4E-43 T 19-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 APA12_RS05780 43c9f8a4c22215a13901c07fcea2fa45 214 ProSitePatterns PS01331 Thymidylate kinase signature. 93 105 - T 19-04-2016 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 APA12_RS05780 43c9f8a4c22215a13901c07fcea2fa45 214 Hamap MF_00165 Thymidylate kinase [tmk]. 5 209 26.621 T 19-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 APA12_RS05780 43c9f8a4c22215a13901c07fcea2fa45 214 Pfam PF02223 Thymidylate kinase 9 201 2.5E-42 T 19-04-2016 APA12_RS05780 43c9f8a4c22215a13901c07fcea2fa45 214 PANTHER PTHR10344 4 214 2.1E-54 T 19-04-2016 APA12_RS05780 43c9f8a4c22215a13901c07fcea2fa45 214 Gene3D G3DSA:3.40.50.300 4 210 5.3E-62 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS11520 71a639c46b68ff3b73e3a7db7d4207c9 533 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 20 533 53.92 T 19-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 APA12_RS11520 71a639c46b68ff3b73e3a7db7d4207c9 533 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 23 212 5.6E-73 T 19-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 APA12_RS11520 71a639c46b68ff3b73e3a7db7d4207c9 533 PANTHER PTHR11922 4 530 1.3E-281 T 19-04-2016 APA12_RS11520 71a639c46b68ff3b73e3a7db7d4207c9 533 PANTHER PTHR11922:SF2 4 530 1.3E-281 T 19-04-2016 APA12_RS11520 71a639c46b68ff3b73e3a7db7d4207c9 533 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 222 533 2.7E-144 T 19-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 APA12_RS11520 71a639c46b68ff3b73e3a7db7d4207c9 533 PRINTS PR00097 Anthranilate synthase component II signature 67 76 6.1E-8 T 19-04-2016 APA12_RS11520 71a639c46b68ff3b73e3a7db7d4207c9 533 PRINTS PR00097 Anthranilate synthase component II signature 94 105 6.1E-8 T 19-04-2016 APA12_RS11520 71a639c46b68ff3b73e3a7db7d4207c9 533 PRINTS PR00097 Anthranilate synthase component II signature 185 198 6.1E-8 T 19-04-2016 APA12_RS11520 71a639c46b68ff3b73e3a7db7d4207c9 533 Gene3D G3DSA:3.40.50.620 231 406 1.3E-59 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS11520 71a639c46b68ff3b73e3a7db7d4207c9 533 SUPERFAMILY SSF52402 205 426 6.84E-59 T 19-04-2016 APA12_RS11520 71a639c46b68ff3b73e3a7db7d4207c9 533 SUPERFAMILY SSF54810 413 533 1.27E-49 T 19-04-2016 APA12_RS11520 71a639c46b68ff3b73e3a7db7d4207c9 533 Pfam PF02540 NAD synthase 233 262 1.1E-5 T 19-04-2016 IPR022310 NAD/GMP synthase APA12_RS11520 71a639c46b68ff3b73e3a7db7d4207c9 533 Pfam PF00958 GMP synthase C terminal domain 441 532 9.3E-43 T 19-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 APA12_RS11520 71a639c46b68ff3b73e3a7db7d4207c9 533 Pfam PF00117 Glutamine amidotransferase class-I 25 207 9.2E-36 T 19-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 APA12_RS11520 71a639c46b68ff3b73e3a7db7d4207c9 533 Gene3D G3DSA:3.30.300.10 409 533 2.4E-50 T 19-04-2016 APA12_RS11520 71a639c46b68ff3b73e3a7db7d4207c9 533 PRINTS PR00096 Glutamine amidotransferase superfamily signature 67 76 3.6E-9 T 19-04-2016 APA12_RS11520 71a639c46b68ff3b73e3a7db7d4207c9 533 PRINTS PR00096 Glutamine amidotransferase superfamily signature 94 105 3.6E-9 T 19-04-2016 APA12_RS11520 71a639c46b68ff3b73e3a7db7d4207c9 533 PRINTS PR00096 Glutamine amidotransferase superfamily signature 185 198 3.6E-9 T 19-04-2016 APA12_RS11520 71a639c46b68ff3b73e3a7db7d4207c9 533 SUPERFAMILY SSF52317 19 245 6.22E-56 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like APA12_RS11520 71a639c46b68ff3b73e3a7db7d4207c9 533 Gene3D G3DSA:3.40.50.880 18 230 1.5E-59 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like APA12_RS00930 f457ddbf526339f001f06066d135a592 370 Pfam PF13416 Bacterial extracellular solute-binding protein 161 335 9.1E-20 T 19-04-2016 APA12_RS00930 f457ddbf526339f001f06066d135a592 370 PANTHER PTHR30222 161 322 6.3E-36 T 19-04-2016 APA12_RS00930 f457ddbf526339f001f06066d135a592 370 Gene3D G3DSA:3.40.190.10 163 319 1.9E-13 T 19-04-2016 APA12_RS00930 f457ddbf526339f001f06066d135a592 370 PANTHER PTHR30222:SF2 161 322 6.3E-36 T 19-04-2016 APA12_RS00930 f457ddbf526339f001f06066d135a592 370 SUPERFAMILY SSF53850 73 366 3.55E-26 T 19-04-2016 APA12_RS08290 1fe06c78f80fddd246cc4febaa1fcc5a 692 Pfam PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal 640 679 1.8E-13 T 19-04-2016 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal GO:0016651|GO:0051536|GO:0055114 APA12_RS08290 1fe06c78f80fddd246cc4febaa1fcc5a 692 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 596 1.2E-221 T 19-04-2016 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 APA12_RS08290 1fe06c78f80fddd246cc4febaa1fcc5a 692 Gene3D G3DSA:3.10.20.30 3 53 6.6E-4 T 19-04-2016 IPR012675 Beta-grasp domain APA12_RS08290 1fe06c78f80fddd246cc4febaa1fcc5a 692 PANTHER PTHR11615 343 681 5.5E-291 T 19-04-2016 APA12_RS08290 1fe06c78f80fddd246cc4febaa1fcc5a 692 PANTHER PTHR11615 3 317 5.5E-291 T 19-04-2016 APA12_RS08290 1fe06c78f80fddd246cc4febaa1fcc5a 692 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 76 8.8E-16 T 19-04-2016 APA12_RS08290 1fe06c78f80fddd246cc4febaa1fcc5a 692 Gene3D G3DSA:3.40.50.1220 433 504 8.7E-4 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APA12_RS08290 1fe06c78f80fddd246cc4febaa1fcc5a 692 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 83 118 4.4E-17 T 19-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 APA12_RS08290 1fe06c78f80fddd246cc4febaa1fcc5a 692 PANTHER PTHR11615:SF115 343 681 5.5E-291 T 19-04-2016 APA12_RS08290 1fe06c78f80fddd246cc4febaa1fcc5a 692 PANTHER PTHR11615:SF115 3 317 5.5E-291 T 19-04-2016 APA12_RS08290 1fe06c78f80fddd246cc4febaa1fcc5a 692 Pfam PF00384 Molybdopterin oxidoreductase 271 599 4.4E-68 T 19-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APA12_RS08290 1fe06c78f80fddd246cc4febaa1fcc5a 692 SUPERFAMILY SSF54862 75 210 1.67E-37 T 19-04-2016 APA12_RS08290 1fe06c78f80fddd246cc4febaa1fcc5a 692 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 98 110 - T 19-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 APA12_RS08290 1fe06c78f80fddd246cc4febaa1fcc5a 692 SUPERFAMILY SSF54292 1 74 4.69E-19 T 19-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APA12_RS08290 1fe06c78f80fddd246cc4febaa1fcc5a 692 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 19-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 APA12_RS08290 1fe06c78f80fddd246cc4febaa1fcc5a 692 Gene3D G3DSA:3.40.50.740 271 409 1.1E-43 T 19-04-2016 APA12_RS08290 1fe06c78f80fddd246cc4febaa1fcc5a 692 Gene3D G3DSA:3.40.50.740 505 627 1.1E-43 T 19-04-2016 APA12_RS08290 1fe06c78f80fddd246cc4febaa1fcc5a 692 SUPERFAMILY SSF53706 213 629 1.57E-93 T 19-04-2016 APA12_RS08290 1fe06c78f80fddd246cc4febaa1fcc5a 692 SMART SM00929 83 123 1.1E-20 T 19-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 APA12_RS08290 1fe06c78f80fddd246cc4febaa1fcc5a 692 Gene3D G3DSA:3.30.70.20 137 202 1.8E-4 T 19-04-2016 APA12_RS08290 1fe06c78f80fddd246cc4febaa1fcc5a 692 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 145 155 - T 19-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 APA12_RS06155 877d1ddad6b1bc823af0f910a3b1d367 158 Pfam PF01967 MoaC family 17 150 5.2E-56 T 19-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 APA12_RS06155 877d1ddad6b1bc823af0f910a3b1d367 158 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 4 158 36.996 T 19-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 APA12_RS06155 877d1ddad6b1bc823af0f910a3b1d367 158 PANTHER PTHR22960 3 158 8.8E-96 T 19-04-2016 APA12_RS06155 877d1ddad6b1bc823af0f910a3b1d367 158 SUPERFAMILY SSF55040 13 155 5.36E-60 T 19-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 APA12_RS06155 877d1ddad6b1bc823af0f910a3b1d367 158 Gene3D G3DSA:3.30.70.640 5 156 5.7E-68 T 19-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 APA12_RS06155 877d1ddad6b1bc823af0f910a3b1d367 158 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 6 152 4.2E-68 T 19-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 APA12_RS13180 23116809f2b38cbb05894b9645d8995b 387 Gene3D G3DSA:3.90.1150.10 256 378 1.7E-32 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APA12_RS13180 23116809f2b38cbb05894b9645d8995b 387 PANTHER PTHR11601:SF34 5 384 1.6E-152 T 19-04-2016 APA12_RS13180 23116809f2b38cbb05894b9645d8995b 387 PIRSF PIRSF005572 2 386 1.5E-109 T 19-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 APA12_RS13180 23116809f2b38cbb05894b9645d8995b 387 PANTHER PTHR11601 5 384 1.6E-152 T 19-04-2016 APA12_RS13180 23116809f2b38cbb05894b9645d8995b 387 Pfam PF00266 Aminotransferase class-V 5 368 1.4E-66 T 19-04-2016 IPR000192 Aminotransferase class V domain APA12_RS13180 23116809f2b38cbb05894b9645d8995b 387 SUPERFAMILY SSF53383 5 379 4.29E-92 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APA12_RS13180 23116809f2b38cbb05894b9645d8995b 387 Gene3D G3DSA:3.40.640.10 17 255 1.0E-81 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APA12_RS12315 cc87e7e7dbec39697b6748ba7154945e 378 Gene3D G3DSA:3.30.70.1400 59 148 8.0E-26 T 19-04-2016 APA12_RS12315 cc87e7e7dbec39697b6748ba7154945e 378 SUPERFAMILY SSF103025 6 290 2.51E-80 T 19-04-2016 APA12_RS12315 cc87e7e7dbec39697b6748ba7154945e 378 Gene3D G3DSA:3.30.1360.120 7 58 5.5E-56 T 19-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 APA12_RS12315 cc87e7e7dbec39697b6748ba7154945e 378 Gene3D G3DSA:3.30.1360.120 151 238 5.5E-56 T 19-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 APA12_RS12315 cc87e7e7dbec39697b6748ba7154945e 378 Gene3D G3DSA:2.40.30.110 291 378 6.7E-23 T 19-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 APA12_RS12315 cc87e7e7dbec39697b6748ba7154945e 378 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 274 367 4.9E-21 T 19-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 APA12_RS12315 cc87e7e7dbec39697b6748ba7154945e 378 PIRSF PIRSF006487 2 378 1.6E-75 T 19-04-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 APA12_RS12315 cc87e7e7dbec39697b6748ba7154945e 378 SUPERFAMILY SSF101790 282 376 1.8E-22 T 19-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain APA12_RS12315 cc87e7e7dbec39697b6748ba7154945e 378 PANTHER PTHR13847:SF209 4 372 9.2E-153 T 19-04-2016 APA12_RS12315 cc87e7e7dbec39697b6748ba7154945e 378 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 7 373 6.6E-101 T 19-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 APA12_RS12315 cc87e7e7dbec39697b6748ba7154945e 378 PANTHER PTHR13847 4 372 9.2E-153 T 19-04-2016 APA12_RS12315 cc87e7e7dbec39697b6748ba7154945e 378 Pfam PF01571 Aminomethyltransferase folate-binding domain 11 260 4.3E-83 T 19-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal APA12_RS08125 26d24dc4c137a976b03eb6b7d83343b6 404 PANTHER PTHR13693 42 397 4.4E-133 T 19-04-2016 APA12_RS08125 26d24dc4c137a976b03eb6b7d83343b6 404 Gene3D G3DSA:3.90.1150.10 277 390 3.7E-28 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APA12_RS08125 26d24dc4c137a976b03eb6b7d83343b6 404 SUPERFAMILY SSF53383 21 396 1.84E-102 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APA12_RS08125 26d24dc4c137a976b03eb6b7d83343b6 404 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 243 252 - T 19-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 APA12_RS08125 26d24dc4c137a976b03eb6b7d83343b6 404 Gene3D G3DSA:3.40.640.10 65 276 5.5E-84 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APA12_RS08125 26d24dc4c137a976b03eb6b7d83343b6 404 Pfam PF00155 Aminotransferase class I and II 48 386 2.6E-55 T 19-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APA12_RS05265 6304f85403d6fe6d22d25c7f7bf2468c 593 Pfam PF16189 Creatinase/Prolidase N-terminal domain 146 304 3.8E-39 T 19-04-2016 APA12_RS05265 6304f85403d6fe6d22d25c7f7bf2468c 593 Gene3D G3DSA:3.90.230.10 299 556 2.2E-54 T 19-04-2016 IPR000994 Peptidase M24, structural domain APA12_RS05265 6304f85403d6fe6d22d25c7f7bf2468c 593 SUPERFAMILY SSF53092 7 134 1.31E-10 T 19-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal APA12_RS05265 6304f85403d6fe6d22d25c7f7bf2468c 593 Gene3D G3DSA:3.40.350.10 169 271 3.9E-4 T 19-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal APA12_RS05265 6304f85403d6fe6d22d25c7f7bf2468c 593 Gene3D G3DSA:3.40.350.10 7 136 1.1E-16 T 19-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal APA12_RS05265 6304f85403d6fe6d22d25c7f7bf2468c 593 SUPERFAMILY SSF55920 301 556 3.79E-54 T 19-04-2016 IPR000994 Peptidase M24, structural domain APA12_RS05265 6304f85403d6fe6d22d25c7f7bf2468c 593 PANTHER PTHR10804 6 178 1.0E-187 T 19-04-2016 APA12_RS05265 6304f85403d6fe6d22d25c7f7bf2468c 593 PANTHER PTHR10804 280 588 1.0E-187 T 19-04-2016 APA12_RS05265 6304f85403d6fe6d22d25c7f7bf2468c 593 PANTHER PTHR10804:SF105 6 178 1.0E-187 T 19-04-2016 APA12_RS05265 6304f85403d6fe6d22d25c7f7bf2468c 593 PANTHER PTHR10804:SF105 280 588 1.0E-187 T 19-04-2016 APA12_RS05265 6304f85403d6fe6d22d25c7f7bf2468c 593 Pfam PF16188 C-terminal region of peptidase_M24 531 590 2.8E-21 T 19-04-2016 IPR032416 Peptidase M24, C-terminal domain APA12_RS05265 6304f85403d6fe6d22d25c7f7bf2468c 593 Pfam PF01321 Creatinase/Prolidase N-terminal domain 8 137 6.9E-16 T 19-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 APA12_RS05265 6304f85403d6fe6d22d25c7f7bf2468c 593 Pfam PF00557 Metallopeptidase family M24 308 520 5.9E-43 T 19-04-2016 IPR000994 Peptidase M24, structural domain APA12_RS03305 ee7740544745fed3e4aec450bc9c0be9 385 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 129 6.9E-40 T 19-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 APA12_RS03305 ee7740544745fed3e4aec450bc9c0be9 385 Pfam PF13288 DXP reductoisomerase C-terminal domain 258 374 1.1E-38 T 19-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 APA12_RS03305 ee7740544745fed3e4aec450bc9c0be9 385 PANTHER PTHR30525 1 380 1.7E-199 T 19-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 APA12_RS03305 ee7740544745fed3e4aec450bc9c0be9 385 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 143 226 2.4E-36 T 19-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 APA12_RS03305 ee7740544745fed3e4aec450bc9c0be9 385 SUPERFAMILY SSF55347 123 259 5.23E-56 T 19-04-2016 APA12_RS03305 ee7740544745fed3e4aec450bc9c0be9 385 Gene3D G3DSA:3.40.50.720 1 147 5.7E-49 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS03305 ee7740544745fed3e4aec450bc9c0be9 385 SUPERFAMILY SSF69055 289 380 9.68E-30 T 19-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 APA12_RS03305 ee7740544745fed3e4aec450bc9c0be9 385 Gene3D G3DSA:1.10.1740.10 301 380 1.6E-29 T 19-04-2016 APA12_RS03305 ee7740544745fed3e4aec450bc9c0be9 385 PIRSF PIRSF006205 1 385 3.1E-146 T 19-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 APA12_RS03305 ee7740544745fed3e4aec450bc9c0be9 385 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 379 44.522 T 19-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 APA12_RS03305 ee7740544745fed3e4aec450bc9c0be9 385 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 377 6.2E-138 T 19-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 APA12_RS03305 ee7740544745fed3e4aec450bc9c0be9 385 SUPERFAMILY SSF51735 2 147 1.81E-46 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS04755 32408310b5aae549b3abf3e97988a6d3 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 1.9E-57 T 19-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 APA12_RS04755 32408310b5aae549b3abf3e97988a6d3 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.131 T 19-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APA12_RS04755 32408310b5aae549b3abf3e97988a6d3 122 Gene3D G3DSA:2.40.150.20 1 122 4.2E-55 T 19-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APA12_RS04755 32408310b5aae549b3abf3e97988a6d3 122 PANTHER PTHR11761 1 122 9.4E-74 T 19-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APA12_RS04755 32408310b5aae549b3abf3e97988a6d3 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 19-04-2016 IPR019972 Ribosomal protein L14P, conserved site APA12_RS04755 32408310b5aae549b3abf3e97988a6d3 122 SMART SM01374 1 122 3.2E-85 T 19-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APA12_RS04755 32408310b5aae549b3abf3e97988a6d3 122 SUPERFAMILY SSF50193 1 122 3.53E-51 T 19-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APA12_RS04755 32408310b5aae549b3abf3e97988a6d3 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 1.1E-55 T 19-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APA12_RS09955 842e9c71319656bccb59552770d1d8ba 519 Pfam PF04055 Radical SAM superfamily 189 348 6.5E-15 T 19-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APA12_RS09955 842e9c71319656bccb59552770d1d8ba 519 SMART SM00729 185 388 7.8E-21 T 19-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APA12_RS09955 842e9c71319656bccb59552770d1d8ba 519 SUPERFAMILY SSF52242 23 109 1.53E-6 T 19-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 APA12_RS09955 842e9c71319656bccb59552770d1d8ba 519 PANTHER PTHR11918 11 510 7.6E-62 T 19-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein APA12_RS09955 842e9c71319656bccb59552770d1d8ba 519 TIGRFAM TIGR04367 HpnR_B12_rSAM: hopanoid C-3 methylase HpnR 1 488 5.2E-272 T 19-04-2016 IPR027564 Hopanoid C-3 methylase HpnR APA12_RS09955 842e9c71319656bccb59552770d1d8ba 519 PANTHER PTHR11918:SF69 11 510 7.6E-62 T 19-04-2016 APA12_RS09955 842e9c71319656bccb59552770d1d8ba 519 Gene3D G3DSA:3.80.30.20 186 373 3.5E-28 T 19-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APA12_RS09955 842e9c71319656bccb59552770d1d8ba 519 SUPERFAMILY SSF102114 170 383 3.66E-30 T 19-04-2016 APA12_RS09955 842e9c71319656bccb59552770d1d8ba 519 Pfam PF02310 B12 binding domain 18 127 9.0E-18 T 19-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 APA12_RS01785 93accfaeed9e87712e916704dc0fed6f 261 PANTHER PTHR13966 51 212 1.1E-28 T 19-04-2016 APA12_RS01785 93accfaeed9e87712e916704dc0fed6f 261 SMART SM00477 56 245 1.7E-23 T 19-04-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 APA12_RS01785 93accfaeed9e87712e916704dc0fed6f 261 SMART SM00892 55 245 4.4E-31 T 19-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 APA12_RS01785 93accfaeed9e87712e916704dc0fed6f 261 SUPERFAMILY SSF54060 30 254 2.71E-54 T 19-04-2016 APA12_RS01785 93accfaeed9e87712e916704dc0fed6f 261 Pfam PF01223 DNA/RNA non-specific endonuclease 50 244 1.8E-39 T 19-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 APA12_RS01785 93accfaeed9e87712e916704dc0fed6f 261 Gene3D G3DSA:3.40.570.10 44 255 2.5E-53 T 19-04-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 APA12_RS09245 86ff95981efcf6636a33c1c01c1497f6 487 Pfam PF04724 Glycosyltransferase family 17 2 237 3.0E-28 T 19-04-2016 IPR006813 Glycosyl transferase, family 17 GO:0003830|GO:0006487|GO:0016020 KEGG: 00500+2.4.1.14|KEGG: 00510+2.4.1.144|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7426|UniPathway: UPA00378 APA12_RS09245 86ff95981efcf6636a33c1c01c1497f6 487 Pfam PF00754 F5/8 type C domain 346 473 9.7E-10 T 19-04-2016 IPR000421 Coagulation factor 5/8 C-terminal domain APA12_RS09245 86ff95981efcf6636a33c1c01c1497f6 487 Gene3D G3DSA:2.60.120.260 336 486 3.0E-27 T 19-04-2016 IPR008979 Galactose-binding domain-like APA12_RS09245 86ff95981efcf6636a33c1c01c1497f6 487 SUPERFAMILY SSF49785 338 486 9.28E-24 T 19-04-2016 IPR008979 Galactose-binding domain-like APA12_RS09245 86ff95981efcf6636a33c1c01c1497f6 487 PANTHER PTHR12224:SF0 2 242 2.4E-36 T 19-04-2016 APA12_RS09245 86ff95981efcf6636a33c1c01c1497f6 487 SMART SM00607 337 486 0.0054 T 19-04-2016 IPR006585 Fucolectin tachylectin-4 pentraxin-1 APA12_RS09245 86ff95981efcf6636a33c1c01c1497f6 487 PANTHER PTHR12224 2 242 2.4E-36 T 19-04-2016 IPR006813 Glycosyl transferase, family 17 GO:0003830|GO:0006487|GO:0016020 KEGG: 00500+2.4.1.14|KEGG: 00510+2.4.1.144|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7426|UniPathway: UPA00378 APA12_RS07040 d2bc87ec24c27cdf4c0338f57475d22f 159 SUPERFAMILY SSF47598 10 48 1.33E-7 T 19-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 APA12_RS07040 d2bc87ec24c27cdf4c0338f57475d22f 159 Hamap MF_00476 Putative nickel-responsive regulator [nikR]. 10 140 19.646 T 19-04-2016 IPR022988 Nickel-responsive transcriptional regulator NikR GO:0003677|GO:0006355|GO:0010045|GO:0016151 APA12_RS07040 d2bc87ec24c27cdf4c0338f57475d22f 159 SUPERFAMILY SSF55021 60 138 3.2E-16 T 19-04-2016 APA12_RS07040 d2bc87ec24c27cdf4c0338f57475d22f 159 PANTHER PTHR34719 7 148 3.4E-28 T 19-04-2016 APA12_RS07040 d2bc87ec24c27cdf4c0338f57475d22f 159 Pfam PF08753 NikR C terminal nickel binding domain 62 138 5.6E-21 T 19-04-2016 IPR014864 Transcription factor, NikR, nickel binding C-terminal APA12_RS07040 d2bc87ec24c27cdf4c0338f57475d22f 159 Gene3D G3DSA:3.30.70.1150 59 138 4.6E-22 T 19-04-2016 APA12_RS07040 d2bc87ec24c27cdf4c0338f57475d22f 159 PANTHER PTHR34719:SF2 7 148 3.4E-28 T 19-04-2016 APA12_RS07040 d2bc87ec24c27cdf4c0338f57475d22f 159 Gene3D G3DSA:1.10.1220.10 11 50 7.5E-9 T 19-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 APA12_RS02620 804a3c5e9e43568ef3be55306552d4b0 350 Hamap MF_00469 UPF0176 protein YceA [yceA]. 17 273 43.872 T 19-04-2016 IPR020936 Uncharacterised protein family UPF0176 APA12_RS02620 804a3c5e9e43568ef3be55306552d4b0 350 PANTHER PTHR22778:SF12 7 307 1.1E-98 T 19-04-2016 APA12_RS02620 804a3c5e9e43568ef3be55306552d4b0 350 PANTHER PTHR22778 7 307 1.1E-98 T 19-04-2016 APA12_RS02620 804a3c5e9e43568ef3be55306552d4b0 350 Gene3D G3DSA:3.40.250.10 112 245 3.3E-38 T 19-04-2016 IPR001763 Rhodanese-like domain APA12_RS02620 804a3c5e9e43568ef3be55306552d4b0 350 SUPERFAMILY SSF52821 105 244 7.96E-27 T 19-04-2016 IPR001763 Rhodanese-like domain APA12_RS02620 804a3c5e9e43568ef3be55306552d4b0 350 Pfam PF00581 Rhodanese-like domain 131 229 3.0E-8 T 19-04-2016 IPR001763 Rhodanese-like domain APA12_RS02620 804a3c5e9e43568ef3be55306552d4b0 350 SMART SM00450 128 233 9.1E-16 T 19-04-2016 IPR001763 Rhodanese-like domain APA12_RS08025 f40729a5ee21572aab32bd3dbd5a17b9 100 SUPERFAMILY SSF88659 12 95 9.91E-12 T 19-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS08025 f40729a5ee21572aab32bd3dbd5a17b9 100 Pfam PF08281 Sigma-70, region 4 40 82 8.9E-7 T 19-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS08025 f40729a5ee21572aab32bd3dbd5a17b9 100 Gene3D G3DSA:1.10.10.10 33 88 1.4E-9 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS08025 f40729a5ee21572aab32bd3dbd5a17b9 100 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 86 6.8E-12 T 19-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS03490 a7547c7255858951164e6ad21a73eab6 500 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 22 494 7.8E-150 T 19-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 APA12_RS03490 a7547c7255858951164e6ad21a73eab6 500 Gene3D G3DSA:3.40.50.300 190 494 3.4E-92 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS03490 a7547c7255858951164e6ad21a73eab6 500 Gene3D G3DSA:1.10.860.10 22 123 3.3E-26 T 19-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal APA12_RS03490 a7547c7255858951164e6ad21a73eab6 500 Pfam PF00772 DnaB-like helicase N terminal domain 21 123 3.2E-25 T 19-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 APA12_RS03490 a7547c7255858951164e6ad21a73eab6 500 PANTHER PTHR30153 6 429 8.9E-156 T 19-04-2016 APA12_RS03490 a7547c7255858951164e6ad21a73eab6 500 PANTHER PTHR30153 454 500 8.9E-156 T 19-04-2016 APA12_RS03490 a7547c7255858951164e6ad21a73eab6 500 SUPERFAMILY SSF48024 20 131 2.35E-30 T 19-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 APA12_RS03490 a7547c7255858951164e6ad21a73eab6 500 Pfam PF03796 DnaB-like helicase C terminal domain 200 492 1.0E-99 T 19-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 APA12_RS03490 a7547c7255858951164e6ad21a73eab6 500 SUPERFAMILY SSF52540 198 425 8.76E-44 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS03490 a7547c7255858951164e6ad21a73eab6 500 SUPERFAMILY SSF52540 459 485 8.76E-44 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS08600 b02888c641bee01d8c13e598e335d33b 276 Pfam PF13411 MerR HTH family regulatory protein 39 107 1.1E-23 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APA12_RS08600 b02888c641bee01d8c13e598e335d33b 276 SUPERFAMILY SSF46955 39 129 2.33E-15 T 19-04-2016 IPR009061 Putative DNA-binding domain APA12_RS08600 b02888c641bee01d8c13e598e335d33b 276 Gene3D G3DSA:1.10.1660.10 39 112 4.9E-14 T 19-04-2016 APA12_RS08600 b02888c641bee01d8c13e598e335d33b 276 PANTHER PTHR30204 30 129 9.8E-19 T 19-04-2016 APA12_RS08600 b02888c641bee01d8c13e598e335d33b 276 SMART SM00422 39 108 0.0019 T 19-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APA12_RS08600 b02888c641bee01d8c13e598e335d33b 276 PANTHER PTHR30204:SF15 30 129 9.8E-19 T 19-04-2016 APA12_RS10695 5d1584c89ca41010208d4812213e3097 611 PANTHER PTHR30509:SF1 18 596 2.1E-61 T 19-04-2016 APA12_RS10695 5d1584c89ca41010208d4812213e3097 611 Pfam PF04632 Fusaric acid resistance protein family 28 287 2.6E-61 T 19-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 APA12_RS10695 5d1584c89ca41010208d4812213e3097 611 PANTHER PTHR30509 18 596 2.1E-61 T 19-04-2016 APA12_RS05740 210e9503f9f5290d93d4628e9316bf7f 152 Pfam PF02470 MlaD protein 38 115 4.0E-17 T 19-04-2016 IPR003399 Mce/MlaD APA12_RS05740 210e9503f9f5290d93d4628e9316bf7f 152 PANTHER PTHR33371 1 151 2.4E-15 T 19-04-2016 APA12_RS08315 3250c2b247a86ab84f15fead9973d9f6 186 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 145 161 - T 19-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 APA12_RS08315 3250c2b247a86ab84f15fead9973d9f6 186 SUPERFAMILY SSF56770 36 180 1.19E-66 T 19-04-2016 APA12_RS08315 3250c2b247a86ab84f15fead9973d9f6 186 PANTHER PTHR11995:SF19 4 180 3.9E-117 T 19-04-2016 APA12_RS08315 3250c2b247a86ab84f15fead9973d9f6 186 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 65 171 1.9E-21 T 19-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 APA12_RS08315 3250c2b247a86ab84f15fead9973d9f6 186 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 38 179 9.7E-75 T 19-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 APA12_RS08315 3250c2b247a86ab84f15fead9973d9f6 186 PANTHER PTHR11995 4 180 3.9E-117 T 19-04-2016 APA12_RS08315 3250c2b247a86ab84f15fead9973d9f6 186 Gene3D G3DSA:3.40.50.700 48 176 3.2E-33 T 19-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 APA12_RS08315 3250c2b247a86ab84f15fead9973d9f6 186 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 27 178 41.542 T 19-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 APA12_RS12980 d8f8098147f8cabee16ea0dbf75b6d90 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 19-04-2016 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 APA12_RS12980 d8f8098147f8cabee16ea0dbf75b6d90 249 PANTHER PTHR21294:SF8 1 249 5.6E-156 T 19-04-2016 APA12_RS12980 d8f8098147f8cabee16ea0dbf75b6d90 249 Gene3D G3DSA:3.40.50.620 1 247 3.9E-106 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS12980 d8f8098147f8cabee16ea0dbf75b6d90 249 PANTHER PTHR21294 1 249 5.6E-156 T 19-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 APA12_RS12980 d8f8098147f8cabee16ea0dbf75b6d90 249 Pfam PF01012 Electron transfer flavoprotein domain 26 206 1.4E-47 T 19-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 APA12_RS12980 d8f8098147f8cabee16ea0dbf75b6d90 249 SUPERFAMILY SSF52402 1 242 2.3E-87 T 19-04-2016 APA12_RS12980 d8f8098147f8cabee16ea0dbf75b6d90 249 PIRSF PIRSF000090 1 249 1.8E-87 T 19-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 APA12_RS12980 d8f8098147f8cabee16ea0dbf75b6d90 249 SMART SM00893 23 211 6.3E-67 T 19-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 APA12_RS09105 19290f9de5d01027b2e101d4c9764ef7 243 PIRSF PIRSF028162 1 242 1.5E-84 T 19-04-2016 IPR016873 Capsular polysaccharide biosynthesis protein, BcbE, predicted APA12_RS09105 19290f9de5d01027b2e101d4c9764ef7 243 SUPERFAMILY SSF53448 2 234 4.9E-15 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS09105 19290f9de5d01027b2e101d4c9764ef7 243 Gene3D G3DSA:3.90.550.10 2 237 2.1E-9 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS04015 2dbb00401a291e127438539c6baac779 357 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 40 347 3.7E-90 T 19-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APA12_RS04015 2dbb00401a291e127438539c6baac779 357 Gene3D G3DSA:3.30.160.40 267 356 1.2E-19 T 19-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APA12_RS04015 2dbb00401a291e127438539c6baac779 357 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 39 348 33.787 T 19-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APA12_RS04015 2dbb00401a291e127438539c6baac779 357 SUPERFAMILY SSF54782 266 356 1.83E-18 T 19-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APA12_RS04015 2dbb00401a291e127438539c6baac779 357 PIRSF PIRSF001438 15 357 3.1E-105 T 19-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APA12_RS04015 2dbb00401a291e127438539c6baac779 357 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 276 292 - T 19-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APA12_RS04015 2dbb00401a291e127438539c6baac779 357 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 40 258 5.7E-68 T 19-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APA12_RS04015 2dbb00401a291e127438539c6baac779 357 PRINTS PR00151 Porphobilinogen deaminase signature 83 103 4.0E-30 T 19-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APA12_RS04015 2dbb00401a291e127438539c6baac779 357 PRINTS PR00151 Porphobilinogen deaminase signature 114 133 4.0E-30 T 19-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APA12_RS04015 2dbb00401a291e127438539c6baac779 357 PRINTS PR00151 Porphobilinogen deaminase signature 275 292 4.0E-30 T 19-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APA12_RS04015 2dbb00401a291e127438539c6baac779 357 PRINTS PR00151 Porphobilinogen deaminase signature 188 205 4.0E-30 T 19-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APA12_RS04015 2dbb00401a291e127438539c6baac779 357 Gene3D G3DSA:3.40.190.10 146 244 1.5E-31 T 19-04-2016 APA12_RS04015 2dbb00401a291e127438539c6baac779 357 SUPERFAMILY SSF53850 39 264 6.19E-66 T 19-04-2016 APA12_RS04015 2dbb00401a291e127438539c6baac779 357 Gene3D G3DSA:3.40.190.10 39 145 8.3E-39 T 19-04-2016 APA12_RS04015 2dbb00401a291e127438539c6baac779 357 PANTHER PTHR11557 16 356 3.7E-117 T 19-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APA12_RS04015 2dbb00401a291e127438539c6baac779 357 PANTHER PTHR11557:SF0 16 356 3.7E-117 T 19-04-2016 APA12_RS04015 2dbb00401a291e127438539c6baac779 357 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 273 346 8.4E-15 T 19-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APA12_RS09505 be9099795f37d8920ad2c74a980627f1 613 Pfam PF03235 Protein of unknown function DUF262 71 289 4.2E-33 T 19-04-2016 IPR004919 Domain of unknown function DUF262 APA12_RS09505 be9099795f37d8920ad2c74a980627f1 613 PANTHER PTHR35149:SF2 54 610 5.5E-60 T 19-04-2016 APA12_RS09505 be9099795f37d8920ad2c74a980627f1 613 Pfam PF07510 Protein of unknown function (DUF1524) 472 603 1.3E-25 T 19-04-2016 IPR011089 Domain of unknown function DUF1524 APA12_RS09505 be9099795f37d8920ad2c74a980627f1 613 PANTHER PTHR35149 54 610 5.5E-60 T 19-04-2016 APA12_RS04110 6c7b994c5f3013a797c4bb10b50d9e04 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 64 1.2E-8 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APA12_RS04110 6c7b994c5f3013a797c4bb10b50d9e04 208 SUPERFAMILY SSF48498 89 182 2.54E-20 T 19-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APA12_RS04110 6c7b994c5f3013a797c4bb10b50d9e04 208 Gene3D G3DSA:1.10.357.10 5 197 6.2E-38 T 19-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APA12_RS04110 6c7b994c5f3013a797c4bb10b50d9e04 208 PANTHER PTHR30055:SF23 1 198 1.5E-24 T 19-04-2016 APA12_RS04110 6c7b994c5f3013a797c4bb10b50d9e04 208 SUPERFAMILY SSF46689 7 80 9.48E-14 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS04110 6c7b994c5f3013a797c4bb10b50d9e04 208 Pfam PF13305 WHG domain 93 177 3.0E-17 T 19-04-2016 IPR025996 WHG domain APA12_RS04110 6c7b994c5f3013a797c4bb10b50d9e04 208 PANTHER PTHR30055 1 198 1.5E-24 T 19-04-2016 APA12_RS00290 72ac0ad65ed2762fffeeb804aee3d341 449 Gene3D G3DSA:3.65.10.10 31 245 8.3E-58 T 19-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APA12_RS00290 72ac0ad65ed2762fffeeb804aee3d341 449 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 19 446 31.489 T 19-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 APA12_RS00290 72ac0ad65ed2762fffeeb804aee3d341 449 Gene3D G3DSA:3.65.10.10 246 445 1.4E-46 T 19-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APA12_RS00290 72ac0ad65ed2762fffeeb804aee3d341 449 PANTHER PTHR21090 12 445 4.0E-158 T 19-04-2016 APA12_RS00290 72ac0ad65ed2762fffeeb804aee3d341 449 SUPERFAMILY SSF55205 17 445 2.45E-122 T 19-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 APA12_RS00290 72ac0ad65ed2762fffeeb804aee3d341 449 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 23 445 1.7E-124 T 19-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 APA12_RS00290 72ac0ad65ed2762fffeeb804aee3d341 449 PIRSF PIRSF000505 10 448 4.1E-122 T 19-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 APA12_RS00290 72ac0ad65ed2762fffeeb804aee3d341 449 ProSitePatterns PS00885 EPSP synthase signature 2. 355 373 - T 19-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 APA12_RS00290 72ac0ad65ed2762fffeeb804aee3d341 449 PANTHER PTHR21090:SF5 12 445 4.0E-158 T 19-04-2016 APA12_RS00290 72ac0ad65ed2762fffeeb804aee3d341 449 ProSitePatterns PS00104 EPSP synthase signature 1. 98 112 - T 19-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 APA12_RS00290 72ac0ad65ed2762fffeeb804aee3d341 449 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 17 438 9.3E-103 T 19-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APA12_RS10535 b78aa4b6066daf84afba9a82f1abe7ad 149 PANTHER PTHR23151:SF64 1 148 1.0E-20 T 19-04-2016 APA12_RS10535 b78aa4b6066daf84afba9a82f1abe7ad 149 Gene3D G3DSA:2.40.50.100 75 148 1.4E-22 T 19-04-2016 APA12_RS10535 b78aa4b6066daf84afba9a82f1abe7ad 149 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 78 91 5.4E-9 T 19-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 APA12_RS10535 b78aa4b6066daf84afba9a82f1abe7ad 149 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 95 109 5.4E-9 T 19-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 APA12_RS10535 b78aa4b6066daf84afba9a82f1abe7ad 149 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 110 123 5.4E-9 T 19-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 APA12_RS10535 b78aa4b6066daf84afba9a82f1abe7ad 149 PANTHER PTHR23151 1 148 1.0E-20 T 19-04-2016 APA12_RS10535 b78aa4b6066daf84afba9a82f1abe7ad 149 Pfam PF00364 Biotin-requiring enzyme 76 148 2.6E-14 T 19-04-2016 IPR000089 Biotin/lipoyl attachment APA12_RS10535 b78aa4b6066daf84afba9a82f1abe7ad 149 SUPERFAMILY SSF51230 74 148 4.19E-18 T 19-04-2016 IPR011053 Single hybrid motif APA12_RS03835 e9abb231210a293446ab1f92f9863290 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 223 232 1.2E-31 T 19-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APA12_RS03835 e9abb231210a293446ab1f92f9863290 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 288 302 1.2E-31 T 19-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APA12_RS03835 e9abb231210a293446ab1f92f9863290 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 139 156 1.2E-31 T 19-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APA12_RS03835 e9abb231210a293446ab1f92f9863290 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 46 68 1.2E-31 T 19-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APA12_RS03835 e9abb231210a293446ab1f92f9863290 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 1.2E-31 T 19-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APA12_RS03835 e9abb231210a293446ab1f92f9863290 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 84 93 1.2E-31 T 19-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APA12_RS03835 e9abb231210a293446ab1f92f9863290 313 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 56 63 - T 19-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APA12_RS03835 e9abb231210a293446ab1f92f9863290 313 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 10 306 5.9E-92 T 19-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APA12_RS03835 e9abb231210a293446ab1f92f9863290 313 PANTHER PTHR11405:SF16 10 306 9.7E-126 T 19-04-2016 APA12_RS03835 e9abb231210a293446ab1f92f9863290 313 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 160 304 1.9E-25 T 19-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 APA12_RS03835 e9abb231210a293446ab1f92f9863290 313 SUPERFAMILY SSF53671 8 307 1.96E-97 T 19-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APA12_RS03835 e9abb231210a293446ab1f92f9863290 313 Gene3D G3DSA:3.40.50.1370 10 149 2.7E-49 T 19-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APA12_RS03835 e9abb231210a293446ab1f92f9863290 313 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 9 309 40.261 T 19-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APA12_RS03835 e9abb231210a293446ab1f92f9863290 313 PANTHER PTHR11405 10 306 9.7E-126 T 19-04-2016 APA12_RS03835 e9abb231210a293446ab1f92f9863290 313 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 3.5E-19 T 19-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APA12_RS03835 e9abb231210a293446ab1f92f9863290 313 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 56 75 3.5E-19 T 19-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APA12_RS03835 e9abb231210a293446ab1f92f9863290 313 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 272 295 3.5E-19 T 19-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APA12_RS03835 e9abb231210a293446ab1f92f9863290 313 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 140 151 3.5E-19 T 19-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APA12_RS03835 e9abb231210a293446ab1f92f9863290 313 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 10 152 1.3E-37 T 19-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 APA12_RS03835 e9abb231210a293446ab1f92f9863290 313 Gene3D G3DSA:3.40.50.1370 150 286 2.3E-51 T 19-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APA12_RS13460 e909392a6e02e26d0a1fb9135295f5d4 394 Pfam PF01494 FAD binding domain 5 339 5.1E-22 T 19-04-2016 IPR002938 FAD-binding domain GO:0071949 APA12_RS13460 e909392a6e02e26d0a1fb9135295f5d4 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 279 294 2.1E-15 T 19-04-2016 APA12_RS13460 e909392a6e02e26d0a1fb9135295f5d4 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 294 310 2.1E-15 T 19-04-2016 APA12_RS13460 e909392a6e02e26d0a1fb9135295f5d4 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 155 170 2.1E-15 T 19-04-2016 APA12_RS13460 e909392a6e02e26d0a1fb9135295f5d4 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 2.1E-15 T 19-04-2016 APA12_RS13460 e909392a6e02e26d0a1fb9135295f5d4 394 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 388 1.4E-110 T 19-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 APA12_RS13460 e909392a6e02e26d0a1fb9135295f5d4 394 SUPERFAMILY SSF51905 266 381 1.43E-52 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS13460 e909392a6e02e26d0a1fb9135295f5d4 394 SUPERFAMILY SSF51905 5 176 1.43E-52 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS13460 e909392a6e02e26d0a1fb9135295f5d4 394 Gene3D G3DSA:3.50.50.60 267 355 1.3E-40 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS13460 e909392a6e02e26d0a1fb9135295f5d4 394 Gene3D G3DSA:3.50.50.60 5 181 1.3E-40 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS13460 e909392a6e02e26d0a1fb9135295f5d4 394 PANTHER PTHR13789 6 388 1.1E-73 T 19-04-2016 APA12_RS13460 e909392a6e02e26d0a1fb9135295f5d4 394 PANTHER PTHR13789:SF5 6 388 1.1E-73 T 19-04-2016 APA12_RS09425 f0348199a6416e142db0090f8ba7b7d9 183 PANTHER PTHR30546 1 121 7.0E-21 T 19-04-2016 APA12_RS09425 f0348199a6416e142db0090f8ba7b7d9 183 SUPERFAMILY SSF52218 1 182 3.15E-40 T 19-04-2016 IPR029039 Flavoprotein-like domain APA12_RS09425 f0348199a6416e142db0090f8ba7b7d9 183 Gene3D G3DSA:3.40.50.360 1 183 4.2E-52 T 19-04-2016 IPR029039 Flavoprotein-like domain APA12_RS09425 f0348199a6416e142db0090f8ba7b7d9 183 PANTHER PTHR30546:SF0 1 121 7.0E-21 T 19-04-2016 APA12_RS09425 f0348199a6416e142db0090f8ba7b7d9 183 Pfam PF03358 NADPH-dependent FMN reductase 34 117 5.5E-10 T 19-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 APA12_RS09425 f0348199a6416e142db0090f8ba7b7d9 183 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 19-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 APA12_RS06310 2fafae5d2e1df777944402f3479d25b6 382 Gene3D G3DSA:3.40.630.30 213 364 4.4E-5 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase APA12_RS06310 2fafae5d2e1df777944402f3479d25b6 382 SUPERFAMILY SSF55729 144 336 1.7E-14 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase APA12_RS06310 2fafae5d2e1df777944402f3479d25b6 382 SUPERFAMILY SSF55729 18 116 1.7E-14 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase APA12_RS06310 2fafae5d2e1df777944402f3479d25b6 382 PANTHER PTHR41368 6 381 2.0E-77 T 19-04-2016 APA12_RS00125 1de509bc826551755e5b7d41002a6d41 342 SMART SM00829 14 338 3.2E-6 T 19-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APA12_RS00125 1de509bc826551755e5b7d41002a6d41 342 Gene3D G3DSA:3.90.180.10 4 172 4.1E-66 T 19-04-2016 IPR011032 GroES-like APA12_RS00125 1de509bc826551755e5b7d41002a6d41 342 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 19-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 APA12_RS00125 1de509bc826551755e5b7d41002a6d41 342 PANTHER PTHR11695:SF280 17 342 2.7E-127 T 19-04-2016 APA12_RS00125 1de509bc826551755e5b7d41002a6d41 342 Gene3D G3DSA:3.40.50.720 173 288 1.2E-29 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS00125 1de509bc826551755e5b7d41002a6d41 342 PANTHER PTHR11695 17 342 2.7E-127 T 19-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APA12_RS00125 1de509bc826551755e5b7d41002a6d41 342 SUPERFAMILY SSF51735 142 308 1.73E-42 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS00125 1de509bc826551755e5b7d41002a6d41 342 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 136 3.0E-32 T 19-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APA12_RS00125 1de509bc826551755e5b7d41002a6d41 342 Pfam PF00107 Zinc-binding dehydrogenase 179 304 7.1E-27 T 19-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APA12_RS00125 1de509bc826551755e5b7d41002a6d41 342 SUPERFAMILY SSF50129 310 338 8.22E-55 T 19-04-2016 IPR011032 GroES-like APA12_RS00125 1de509bc826551755e5b7d41002a6d41 342 SUPERFAMILY SSF50129 4 146 8.22E-55 T 19-04-2016 IPR011032 GroES-like APA12_RS08790 4f6ab1ebc61ab570b19ea2152fc527a4 291 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 151 215 1.7E-22 T 19-04-2016 IPR017703 YgfZ/GcvT conserved site APA12_RS08790 4f6ab1ebc61ab570b19ea2152fc527a4 291 PANTHER PTHR22602:SF0 3 254 1.3E-57 T 19-04-2016 APA12_RS08790 4f6ab1ebc61ab570b19ea2152fc527a4 291 PANTHER PTHR22602 3 254 1.3E-57 T 19-04-2016 APA12_RS08790 4f6ab1ebc61ab570b19ea2152fc527a4 291 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 190 257 3.1E-9 T 19-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 APA12_RS08790 4f6ab1ebc61ab570b19ea2152fc527a4 291 Pfam PF01571 Aminomethyltransferase folate-binding domain 11 99 4.2E-9 T 19-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal APA12_RS08790 4f6ab1ebc61ab570b19ea2152fc527a4 291 SUPERFAMILY SSF103025 5 204 1.16E-46 T 19-04-2016 APA12_RS08790 4f6ab1ebc61ab570b19ea2152fc527a4 291 Gene3D G3DSA:3.30.70.1400 14 98 1.5E-22 T 19-04-2016 APA12_RS08815 3980732089f0a029593f1ad8437965a2 291 SUPERFAMILY SSF51735 5 162 2.03E-31 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS08815 3980732089f0a029593f1ad8437965a2 291 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 6 159 7.8E-30 T 19-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 APA12_RS08815 3980732089f0a029593f1ad8437965a2 291 PANTHER PTHR22981 1 286 3.2E-67 T 19-04-2016 APA12_RS08815 3980732089f0a029593f1ad8437965a2 291 Gene3D G3DSA:3.40.50.720 3 162 7.5E-38 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS08815 3980732089f0a029593f1ad8437965a2 291 SUPERFAMILY SSF48179 162 285 1.7E-25 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APA12_RS08815 3980732089f0a029593f1ad8437965a2 291 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 164 280 3.0E-21 T 19-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 APA12_RS08815 3980732089f0a029593f1ad8437965a2 291 Gene3D G3DSA:1.10.1040.10 164 285 7.6E-26 T 19-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APA12_RS08815 3980732089f0a029593f1ad8437965a2 291 PIRSF PIRSF000103 1 290 2.0E-62 T 19-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 APA12_RS09980 0fd81eda14458cd76cbfd6b4efb272bf 310 Gene3D G3DSA:3.30.565.10 143 301 1.4E-36 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS09980 0fd81eda14458cd76cbfd6b4efb272bf 310 SUPERFAMILY SSF55874 127 297 2.49E-36 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS09980 0fd81eda14458cd76cbfd6b4efb272bf 310 SUPERFAMILY SSF158472 23 67 9.68E-5 T 19-04-2016 APA12_RS09980 0fd81eda14458cd76cbfd6b4efb272bf 310 PANTHER PTHR24423 11 288 2.4E-58 T 19-04-2016 APA12_RS09980 0fd81eda14458cd76cbfd6b4efb272bf 310 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 182 294 3.6E-19 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS09980 0fd81eda14458cd76cbfd6b4efb272bf 310 PRINTS PR00344 Bacterial sensor protein C-terminal signature 260 278 7.8E-9 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS09980 0fd81eda14458cd76cbfd6b4efb272bf 310 PRINTS PR00344 Bacterial sensor protein C-terminal signature 227 241 7.8E-9 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS09980 0fd81eda14458cd76cbfd6b4efb272bf 310 SMART SM00304 17 70 0.0069 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APA12_RS09980 0fd81eda14458cd76cbfd6b4efb272bf 310 Gene3D G3DSA:1.10.287.130 63 132 5.2E-6 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS09980 0fd81eda14458cd76cbfd6b4efb272bf 310 SUPERFAMILY SSF47384 55 137 1.41E-10 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS09980 0fd81eda14458cd76cbfd6b4efb272bf 310 SMART SM00387 182 299 3.7E-31 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS12855 97e99dc851458aee103f1d5e9134a8eb 154 Pfam PF03652 Holliday junction resolvase 18 151 4.0E-36 T 19-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 APA12_RS12855 97e99dc851458aee103f1d5e9134a8eb 154 SUPERFAMILY SSF53098 18 152 7.13E-35 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS12855 97e99dc851458aee103f1d5e9134a8eb 154 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 17 153 21.689 T 19-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 APA12_RS12855 97e99dc851458aee103f1d5e9134a8eb 154 SMART SM00732 17 117 2.0E-20 T 19-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 APA12_RS12855 97e99dc851458aee103f1d5e9134a8eb 154 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 20 150 1.4E-25 T 19-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 APA12_RS12855 97e99dc851458aee103f1d5e9134a8eb 154 Gene3D G3DSA:3.30.420.140 17 152 1.6E-41 T 19-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 APA12_RS12855 97e99dc851458aee103f1d5e9134a8eb 154 PANTHER PTHR33317 13 154 3.6E-32 T 19-04-2016 APA12_RS12855 97e99dc851458aee103f1d5e9134a8eb 154 PANTHER PTHR33317:SF1 13 154 3.6E-32 T 19-04-2016 APA12_RS00055 d8fdccaacca21a040dac8248b97bb67a 954 PANTHER PTHR32282 9 951 0.0 T 19-04-2016 APA12_RS00055 d8fdccaacca21a040dac8248b97bb67a 954 Hamap MF_00205 UvrABC system protein A [uvrA]. 9 951 22.427 T 19-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 APA12_RS00055 d8fdccaacca21a040dac8248b97bb67a 954 SUPERFAMILY SSF52540 443 581 2.13E-47 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS00055 d8fdccaacca21a040dac8248b97bb67a 954 SUPERFAMILY SSF52540 12 212 2.13E-47 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS00055 d8fdccaacca21a040dac8248b97bb67a 954 PANTHER PTHR32282:SF2 9 951 0.0 T 19-04-2016 APA12_RS00055 d8fdccaacca21a040dac8248b97bb67a 954 Gene3D G3DSA:1.20.1580.10 417 489 9.7E-52 T 19-04-2016 APA12_RS00055 d8fdccaacca21a040dac8248b97bb67a 954 Gene3D G3DSA:1.20.1580.10 99 137 9.7E-52 T 19-04-2016 APA12_RS00055 d8fdccaacca21a040dac8248b97bb67a 954 Gene3D G3DSA:1.20.1580.10 262 295 9.7E-52 T 19-04-2016 APA12_RS00055 d8fdccaacca21a040dac8248b97bb67a 954 Gene3D G3DSA:3.40.50.300 9 59 4.5E-56 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS00055 d8fdccaacca21a040dac8248b97bb67a 954 Gene3D G3DSA:3.40.50.300 832 948 6.0E-61 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS00055 d8fdccaacca21a040dac8248b97bb67a 954 Gene3D G3DSA:3.40.50.300 614 680 6.0E-61 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS00055 d8fdccaacca21a040dac8248b97bb67a 954 Gene3D G3DSA:3.40.50.300 490 611 4.5E-56 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS00055 d8fdccaacca21a040dac8248b97bb67a 954 Gene3D G3DSA:3.30.1490.20 208 250 1.7E-27 T 19-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APA12_RS00055 d8fdccaacca21a040dac8248b97bb67a 954 Gene3D G3DSA:3.30.1490.20 138 161 1.7E-27 T 19-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APA12_RS00055 d8fdccaacca21a040dac8248b97bb67a 954 ProSitePatterns PS00211 ABC transporters family signature. 499 513 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APA12_RS00055 d8fdccaacca21a040dac8248b97bb67a 954 ProSitePatterns PS00211 ABC transporters family signature. 841 855 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APA12_RS00055 d8fdccaacca21a040dac8248b97bb67a 954 Gene3D G3DSA:1.20.1580.10 705 831 9.7E-52 T 19-04-2016 APA12_RS00055 d8fdccaacca21a040dac8248b97bb67a 954 SUPERFAMILY SSF52540 624 921 1.62E-49 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS00055 d8fdccaacca21a040dac8248b97bb67a 954 Gene3D G3DSA:1.10.8.280 298 416 1.8E-37 T 19-04-2016 APA12_RS00055 d8fdccaacca21a040dac8248b97bb67a 954 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 12 936 0.0 T 19-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 APA12_RS00185 7b9036ec579be3a99488eab1ee203e99 407 Gene3D G3DSA:3.40.50.1260 7 181 1.4E-69 T 19-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APA12_RS00185 7b9036ec579be3a99488eab1ee203e99 407 PRINTS PR00477 Phosphoglycerate kinase family signature 34 56 2.9E-83 T 19-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APA12_RS00185 7b9036ec579be3a99488eab1ee203e99 407 PRINTS PR00477 Phosphoglycerate kinase family signature 13 29 2.9E-83 T 19-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APA12_RS00185 7b9036ec579be3a99488eab1ee203e99 407 PRINTS PR00477 Phosphoglycerate kinase family signature 375 392 2.9E-83 T 19-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APA12_RS00185 7b9036ec579be3a99488eab1ee203e99 407 PRINTS PR00477 Phosphoglycerate kinase family signature 315 340 2.9E-83 T 19-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APA12_RS00185 7b9036ec579be3a99488eab1ee203e99 407 PRINTS PR00477 Phosphoglycerate kinase family signature 352 363 2.9E-83 T 19-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APA12_RS00185 7b9036ec579be3a99488eab1ee203e99 407 PRINTS PR00477 Phosphoglycerate kinase family signature 112 127 2.9E-83 T 19-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APA12_RS00185 7b9036ec579be3a99488eab1ee203e99 407 PRINTS PR00477 Phosphoglycerate kinase family signature 193 212 2.9E-83 T 19-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APA12_RS00185 7b9036ec579be3a99488eab1ee203e99 407 PRINTS PR00477 Phosphoglycerate kinase family signature 170 192 2.9E-83 T 19-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APA12_RS00185 7b9036ec579be3a99488eab1ee203e99 407 PRINTS PR00477 Phosphoglycerate kinase family signature 140 162 2.9E-83 T 19-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APA12_RS00185 7b9036ec579be3a99488eab1ee203e99 407 SUPERFAMILY SSF53748 6 398 2.0E-148 T 19-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APA12_RS00185 7b9036ec579be3a99488eab1ee203e99 407 Gene3D G3DSA:3.40.50.1270 182 387 1.2E-79 T 19-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APA12_RS00185 7b9036ec579be3a99488eab1ee203e99 407 Pfam PF00162 Phosphoglycerate kinase 10 389 1.1E-148 T 19-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APA12_RS00185 7b9036ec579be3a99488eab1ee203e99 407 PIRSF PIRSF000724 1 405 1.2E-142 T 19-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APA12_RS00185 7b9036ec579be3a99488eab1ee203e99 407 PANTHER PTHR11406 8 398 1.3E-206 T 19-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APA12_RS00185 7b9036ec579be3a99488eab1ee203e99 407 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 399 39.612 T 19-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APA12_RS06570 2f1674754668e1fcb431f98441eb862f 209 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 129 205 4.0E-16 T 19-04-2016 IPR006260 TonB, C-terminal GO:0006810 APA12_RS06570 2f1674754668e1fcb431f98441eb862f 209 PRINTS PR01217 Proline rich extensin signature 80 101 7.8E-9 T 19-04-2016 APA12_RS06570 2f1674754668e1fcb431f98441eb862f 209 PRINTS PR01217 Proline rich extensin signature 31 43 7.8E-9 T 19-04-2016 APA12_RS06570 2f1674754668e1fcb431f98441eb862f 209 PRINTS PR01217 Proline rich extensin signature 65 77 7.8E-9 T 19-04-2016 APA12_RS06570 2f1674754668e1fcb431f98441eb862f 209 PRINTS PR01217 Proline rich extensin signature 45 61 7.8E-9 T 19-04-2016 APA12_RS06570 2f1674754668e1fcb431f98441eb862f 209 SUPERFAMILY SSF74653 123 201 2.88E-17 T 19-04-2016 APA12_RS06570 2f1674754668e1fcb431f98441eb862f 209 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 130 207 2.2E-12 T 19-04-2016 IPR006260 TonB, C-terminal GO:0006810 APA12_RS06570 2f1674754668e1fcb431f98441eb862f 209 Gene3D G3DSA:3.30.1150.10 99 209 3.4E-11 T 19-04-2016 APA12_RS09725 896b410b11f6f2b57364885750c8b67e 459 SUPERFAMILY SSF51569 9 456 1.76E-199 T 19-04-2016 APA12_RS09725 896b410b11f6f2b57364885750c8b67e 459 PANTHER PTHR21337 3 459 7.9E-292 T 19-04-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 APA12_RS09725 896b410b11f6f2b57364885750c8b67e 459 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 15 458 2.0E-210 T 19-04-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 APA12_RS09725 896b410b11f6f2b57364885750c8b67e 459 Pfam PF01474 Class-II DAHP synthetase family 15 452 1.4E-201 T 19-04-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 APA12_RS01035 90fc15641700b30eb717204ebae9f491 180 Pfam PF00578 AhpC/TSA family 4 139 2.9E-31 T 19-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 APA12_RS01035 90fc15641700b30eb717204ebae9f491 180 PIRSF PIRSF000239 1 180 6.8E-49 T 19-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 APA12_RS01035 90fc15641700b30eb717204ebae9f491 180 Gene3D G3DSA:3.40.30.10 2 179 8.1E-61 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS01035 90fc15641700b30eb717204ebae9f491 180 PANTHER PTHR10681 1 179 1.4E-76 T 19-04-2016 APA12_RS01035 90fc15641700b30eb717204ebae9f491 180 SUPERFAMILY SSF52833 1 179 1.66E-54 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS01035 90fc15641700b30eb717204ebae9f491 180 PANTHER PTHR10681:SF87 1 179 1.4E-76 T 19-04-2016 APA12_RS09250 3912f1d6c0acfc771bcffb09b3d0239b 448 Gene3D G3DSA:1.10.3430.10 27 428 3.9E-143 T 19-04-2016 IPR029020 Ammonium/urea transporter APA12_RS09250 3912f1d6c0acfc771bcffb09b3d0239b 448 PANTHER PTHR11730:SF17 23 114 1.2E-183 T 19-04-2016 APA12_RS09250 3912f1d6c0acfc771bcffb09b3d0239b 448 ProSitePatterns PS01219 Ammonium transporters signature. 201 226 - T 19-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 APA12_RS09250 3912f1d6c0acfc771bcffb09b3d0239b 448 PANTHER PTHR11730 132 445 1.2E-183 T 19-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 APA12_RS09250 3912f1d6c0acfc771bcffb09b3d0239b 448 PANTHER PTHR11730 23 114 1.2E-183 T 19-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 APA12_RS09250 3912f1d6c0acfc771bcffb09b3d0239b 448 TIGRFAM TIGR00836 amt: ammonium transporter 32 444 3.4E-138 T 19-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 APA12_RS09250 3912f1d6c0acfc771bcffb09b3d0239b 448 PANTHER PTHR11730:SF17 132 445 1.2E-183 T 19-04-2016 APA12_RS09250 3912f1d6c0acfc771bcffb09b3d0239b 448 SUPERFAMILY SSF111352 28 428 3.66E-131 T 19-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 APA12_RS09250 3912f1d6c0acfc771bcffb09b3d0239b 448 Pfam PF00909 Ammonium Transporter Family 34 444 7.4E-126 T 19-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 APA12_RS10515 e428b11b9259aa0da5ed2e0a2f0c1c11 253 SUPERFAMILY SSF88713 1 248 6.45E-84 T 19-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 APA12_RS10515 e428b11b9259aa0da5ed2e0a2f0c1c11 253 PANTHER PTHR30292 1 252 1.0E-104 T 19-04-2016 APA12_RS10515 e428b11b9259aa0da5ed2e0a2f0c1c11 253 PANTHER PTHR30292:SF0 1 252 1.0E-104 T 19-04-2016 APA12_RS10515 e428b11b9259aa0da5ed2e0a2f0c1c11 253 Pfam PF03746 LamB/YcsF family 3 240 7.9E-89 T 19-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF APA12_RS10050 fe385182560ce13cf9322bc98b5f5bb1 455 PANTHER PTHR10566 13 442 2.9E-76 T 19-04-2016 APA12_RS10050 fe385182560ce13cf9322bc98b5f5bb1 455 Gene3D G3DSA:1.10.510.10 227 303 2.0E-6 T 19-04-2016 APA12_RS10050 fe385182560ce13cf9322bc98b5f5bb1 455 Pfam PF03109 ABC1 family 104 217 4.7E-29 T 19-04-2016 IPR004147 UbiB domain APA12_RS10050 fe385182560ce13cf9322bc98b5f5bb1 455 SUPERFAMILY SSF56112 86 149 4.0E-22 T 19-04-2016 IPR011009 Protein kinase-like domain APA12_RS10050 fe385182560ce13cf9322bc98b5f5bb1 455 SUPERFAMILY SSF56112 181 336 4.0E-22 T 19-04-2016 IPR011009 Protein kinase-like domain APA12_RS00815 a13702cb90ef62f149bae080a060a224 238 Pfam PF00005 ABC transporter 26 167 3.6E-31 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS00815 a13702cb90ef62f149bae080a060a224 238 PANTHER PTHR24220 12 238 4.2E-110 T 19-04-2016 APA12_RS00815 a13702cb90ef62f149bae080a060a224 238 PANTHER PTHR24220:SF404 12 238 4.2E-110 T 19-04-2016 APA12_RS00815 a13702cb90ef62f149bae080a060a224 238 Gene3D G3DSA:3.40.50.300 8 227 6.8E-61 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS00815 a13702cb90ef62f149bae080a060a224 238 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 11 238 9.8E-96 T 19-04-2016 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE APA12_RS00815 a13702cb90ef62f149bae080a060a224 238 SUPERFAMILY SSF52540 9 226 2.04E-58 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS00815 a13702cb90ef62f149bae080a060a224 238 SMART SM00382 35 217 1.7E-13 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS04175 08f34b75b69d678f9ebe51f353d81099 399 Gene3D G3DSA:1.10.443.10 220 380 1.5E-21 T 19-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APA12_RS04175 08f34b75b69d678f9ebe51f353d81099 399 Pfam PF00589 Phage integrase family 221 379 2.4E-16 T 19-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APA12_RS04175 08f34b75b69d678f9ebe51f353d81099 399 Pfam PF13356 Domain of unknown function (DUF4102) 11 90 3.2E-9 T 19-04-2016 IPR025166 Domain of unknown function DUF4102 APA12_RS04175 08f34b75b69d678f9ebe51f353d81099 399 Gene3D G3DSA:1.10.150.130 102 194 8.4E-7 T 19-04-2016 IPR023109 Integrase/recombinase, N-terminal APA12_RS04175 08f34b75b69d678f9ebe51f353d81099 399 PANTHER PTHR30629 1 395 2.2E-62 T 19-04-2016 APA12_RS04175 08f34b75b69d678f9ebe51f353d81099 399 SUPERFAMILY SSF56349 101 390 3.83E-47 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APA12_RS04175 08f34b75b69d678f9ebe51f353d81099 399 PANTHER PTHR30629:SF2 1 395 2.2E-62 T 19-04-2016 APA12_RS09790 73812a961b14d6ea091cd1270e881492 337 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 22 297 1.5E-70 T 19-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 APA12_RS09790 73812a961b14d6ea091cd1270e881492 337 SUPERFAMILY SSF52540 23 176 4.97E-17 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS09790 73812a961b14d6ea091cd1270e881492 337 PANTHER PTHR11088 8 294 1.0E-81 T 19-04-2016 APA12_RS09790 73812a961b14d6ea091cd1270e881492 337 SUPERFAMILY SSF52540 17 54 1.25E-5 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS09790 73812a961b14d6ea091cd1270e881492 337 SUPERFAMILY SSF52540 183 230 1.25E-5 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS09790 73812a961b14d6ea091cd1270e881492 337 Gene3D G3DSA:3.40.50.300 21 187 1.2E-46 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS09790 73812a961b14d6ea091cd1270e881492 337 Gene3D G3DSA:1.10.287.890 216 296 3.1E-26 T 19-04-2016 APA12_RS09790 73812a961b14d6ea091cd1270e881492 337 Pfam PF01715 IPP transferase 54 297 7.4E-65 T 19-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 APA12_RS09790 73812a961b14d6ea091cd1270e881492 337 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 21 328 25.439 T 19-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 APA12_RS07090 9b4e0fab7c1c32823aba074418f498dc 247 Pfam PF07715 TonB-dependent Receptor Plug Domain 100 203 1.3E-14 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS07090 9b4e0fab7c1c32823aba074418f498dc 247 SUPERFAMILY SSF56935 94 231 3.94E-19 T 19-04-2016 APA12_RS07090 9b4e0fab7c1c32823aba074418f498dc 247 PANTHER PTHR32552 131 215 3.6E-15 T 19-04-2016 APA12_RS07090 9b4e0fab7c1c32823aba074418f498dc 247 Gene3D G3DSA:2.170.130.10 103 217 8.2E-20 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS07090 9b4e0fab7c1c32823aba074418f498dc 247 PANTHER PTHR32552:SF18 131 215 3.6E-15 T 19-04-2016 APA12_RS11755 c47ead7085fc52c9332c97e7e2b0e2c9 237 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 9 232 31.615 T 19-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APA12_RS11755 c47ead7085fc52c9332c97e7e2b0e2c9 237 SUPERFAMILY SSF100950 11 157 1.02E-41 T 19-04-2016 APA12_RS11755 c47ead7085fc52c9332c97e7e2b0e2c9 237 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 13 229 1.6E-77 T 19-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APA12_RS11755 c47ead7085fc52c9332c97e7e2b0e2c9 237 Gene3D G3DSA:3.30.70.260 151 212 2.7E-22 T 19-04-2016 APA12_RS11755 c47ead7085fc52c9332c97e7e2b0e2c9 237 SUPERFAMILY SSF75445 139 215 1.26E-21 T 19-04-2016 APA12_RS11755 c47ead7085fc52c9332c97e7e2b0e2c9 237 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 58 228 4.3E-59 T 19-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APA12_RS11755 c47ead7085fc52c9332c97e7e2b0e2c9 237 Gene3D G3DSA:3.40.50.1360 12 150 1.5E-57 T 19-04-2016 APA12_RS11755 c47ead7085fc52c9332c97e7e2b0e2c9 237 PANTHER PTHR11934 13 236 3.3E-90 T 19-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APA12_RS06845 d88f4d7b68cc592108039175d7fd5ff2 178 PANTHER PTHR34219 1 178 3.0E-14 T 19-04-2016 APA12_RS06845 d88f4d7b68cc592108039175d7fd5ff2 178 Pfam PF03929 PepSY-associated TM region 12 177 1.6E-12 T 19-04-2016 IPR005625 PepSY-associated TM protein APA12_RS06845 d88f4d7b68cc592108039175d7fd5ff2 178 PANTHER PTHR34219:SF3 1 178 3.0E-14 T 19-04-2016 APA12_RS06220 95fb73310eb14bd54d7faf7613a86cbc 477 Gene3D G3DSA:1.10.1750.10 376 476 2.3E-39 T 19-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 APA12_RS06220 95fb73310eb14bd54d7faf7613a86cbc 477 ProSitePatterns PS01008 DnaA protein signature. 435 454 - T 19-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 APA12_RS06220 95fb73310eb14bd54d7faf7613a86cbc 477 SMART SM00382 175 378 2.9E-5 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS06220 95fb73310eb14bd54d7faf7613a86cbc 477 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 22 476 31.203 T 19-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 APA12_RS06220 95fb73310eb14bd54d7faf7613a86cbc 477 Pfam PF11638 DnaA N-terminal domain 23 84 1.5E-17 T 19-04-2016 IPR024633 DnaA N-terminal domain APA12_RS06220 95fb73310eb14bd54d7faf7613a86cbc 477 Gene3D G3DSA:3.40.50.300 140 305 3.7E-56 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS06220 95fb73310eb14bd54d7faf7613a86cbc 477 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 386 454 7.4E-30 T 19-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 APA12_RS06220 95fb73310eb14bd54d7faf7613a86cbc 477 Pfam PF00308 Bacterial dnaA protein 142 358 3.7E-84 T 19-04-2016 IPR013317 Chromosomal replication initiator protein DnaA APA12_RS06220 95fb73310eb14bd54d7faf7613a86cbc 477 Gene3D G3DSA:1.10.8.60 309 375 1.9E-27 T 19-04-2016 APA12_RS06220 95fb73310eb14bd54d7faf7613a86cbc 477 SUPERFAMILY SSF48295 372 476 3.4E-37 T 19-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 APA12_RS06220 95fb73310eb14bd54d7faf7613a86cbc 477 PANTHER PTHR30050 21 121 1.1E-187 T 19-04-2016 APA12_RS06220 95fb73310eb14bd54d7faf7613a86cbc 477 PANTHER PTHR30050 140 477 1.1E-187 T 19-04-2016 APA12_RS06220 95fb73310eb14bd54d7faf7613a86cbc 477 PANTHER PTHR30050:SF2 21 121 1.1E-187 T 19-04-2016 APA12_RS06220 95fb73310eb14bd54d7faf7613a86cbc 477 PANTHER PTHR30050:SF2 140 477 1.1E-187 T 19-04-2016 APA12_RS06220 95fb73310eb14bd54d7faf7613a86cbc 477 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 25 475 1.9E-162 T 19-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 APA12_RS06220 95fb73310eb14bd54d7faf7613a86cbc 477 SMART SM00760 385 454 1.7E-40 T 19-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 APA12_RS06220 95fb73310eb14bd54d7faf7613a86cbc 477 SUPERFAMILY SSF52540 144 353 1.25E-35 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS06220 95fb73310eb14bd54d7faf7613a86cbc 477 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 176 196 1.5E-44 T 19-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APA12_RS06220 95fb73310eb14bd54d7faf7613a86cbc 477 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 207 221 1.5E-44 T 19-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APA12_RS06220 95fb73310eb14bd54d7faf7613a86cbc 477 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 435 454 1.5E-44 T 19-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APA12_RS06220 95fb73310eb14bd54d7faf7613a86cbc 477 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 273 300 1.5E-44 T 19-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APA12_RS06220 95fb73310eb14bd54d7faf7613a86cbc 477 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 239 253 1.5E-44 T 19-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APA12_RS03890 d6fee65499a84492795aaa04bfc11ffa 236 PANTHER PTHR10434 1 209 1.4E-40 T 19-04-2016 APA12_RS03890 d6fee65499a84492795aaa04bfc11ffa 236 Gene3D G3DSA:3.40.1130.10 42 230 8.3E-23 T 19-04-2016 APA12_RS03890 d6fee65499a84492795aaa04bfc11ffa 236 SUPERFAMILY SSF69593 4 210 1.96E-36 T 19-04-2016 APA12_RS03890 d6fee65499a84492795aaa04bfc11ffa 236 Pfam PF01553 Acyltransferase 57 182 3.5E-25 T 19-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APA12_RS03890 d6fee65499a84492795aaa04bfc11ffa 236 SMART SM00563 72 186 1.5E-29 T 19-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APA12_RS06345 2be0004e09b56aef41e3c8cdc3151f6c 506 Pfam PF01266 FAD dependent oxidoreductase 13 334 2.3E-45 T 19-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 APA12_RS06345 2be0004e09b56aef41e3c8cdc3151f6c 506 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 17 34 - T 19-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APA12_RS06345 2be0004e09b56aef41e3c8cdc3151f6c 506 PANTHER PTHR11985 7 499 5.3E-177 T 19-04-2016 APA12_RS06345 2be0004e09b56aef41e3c8cdc3151f6c 506 SUPERFAMILY SSF54373 237 330 2.55E-5 T 19-04-2016 APA12_RS06345 2be0004e09b56aef41e3c8cdc3151f6c 506 Gene3D G3DSA:3.50.50.60 12 251 1.8E-35 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS06345 2be0004e09b56aef41e3c8cdc3151f6c 506 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 362 372 - T 19-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APA12_RS06345 2be0004e09b56aef41e3c8cdc3151f6c 506 SUPERFAMILY SSF51905 12 271 2.75E-33 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS06345 2be0004e09b56aef41e3c8cdc3151f6c 506 SUPERFAMILY SSF51905 323 383 2.75E-33 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS06345 2be0004e09b56aef41e3c8cdc3151f6c 506 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 392 495 1.9E-10 T 19-04-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APA12_RS06345 2be0004e09b56aef41e3c8cdc3151f6c 506 PANTHER PTHR11985:SF1 7 499 5.3E-177 T 19-04-2016 APA12_RS06345 2be0004e09b56aef41e3c8cdc3151f6c 506 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 41 53 1.6E-27 T 19-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APA12_RS06345 2be0004e09b56aef41e3c8cdc3151f6c 506 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 86 98 1.6E-27 T 19-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APA12_RS06345 2be0004e09b56aef41e3c8cdc3151f6c 506 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 12 24 1.6E-27 T 19-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APA12_RS06345 2be0004e09b56aef41e3c8cdc3151f6c 506 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 357 369 1.6E-27 T 19-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APA12_RS06345 2be0004e09b56aef41e3c8cdc3151f6c 506 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 25 35 1.6E-27 T 19-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APA12_RS06345 2be0004e09b56aef41e3c8cdc3151f6c 506 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 324 330 1.6E-27 T 19-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APA12_RS01385 903b42dc9e9ea8d3934c05cc21aafd46 341 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 28 338 4.5E-110 T 19-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 APA12_RS01385 903b42dc9e9ea8d3934c05cc21aafd46 341 PANTHER PTHR22594 26 336 2.9E-103 T 19-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS01385 903b42dc9e9ea8d3934c05cc21aafd46 341 Gene3D G3DSA:3.30.930.10 27 338 1.0E-66 T 19-04-2016 APA12_RS01385 903b42dc9e9ea8d3934c05cc21aafd46 341 PRINTS PR00982 Lysyl-tRNA synthetase signature 41 51 4.6E-9 T 19-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APA12_RS01385 903b42dc9e9ea8d3934c05cc21aafd46 341 PRINTS PR00982 Lysyl-tRNA synthetase signature 108 125 4.6E-9 T 19-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APA12_RS01385 903b42dc9e9ea8d3934c05cc21aafd46 341 PRINTS PR00982 Lysyl-tRNA synthetase signature 226 242 4.6E-9 T 19-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APA12_RS01385 903b42dc9e9ea8d3934c05cc21aafd46 341 PRINTS PR00982 Lysyl-tRNA synthetase signature 90 103 4.6E-9 T 19-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APA12_RS01385 903b42dc9e9ea8d3934c05cc21aafd46 341 PANTHER PTHR22594:SF7 26 336 2.9E-103 T 19-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 APA12_RS01385 903b42dc9e9ea8d3934c05cc21aafd46 341 Pfam PF00152 tRNA synthetases class II (D, K and N) 27 337 4.4E-36 T 19-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS01385 903b42dc9e9ea8d3934c05cc21aafd46 341 SUPERFAMILY SSF55681 25 338 3.32E-68 T 19-04-2016 APA12_RS11430 826ee74154ea51b1b3224b48326545ac 350 TIGRFAM TIGR02475 CobW: cobalamin biosynthesis protein CobW 5 343 1.5E-156 T 19-04-2016 IPR012824 Cobalamin (vitamin B12) biosynthesis CobW GO:0009236 UniPathway: UPA00148 APA12_RS11430 826ee74154ea51b1b3224b48326545ac 350 Gene3D G3DSA:3.40.50.300 6 229 3.0E-63 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS11430 826ee74154ea51b1b3224b48326545ac 350 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 254 345 1.3E-14 T 19-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal APA12_RS11430 826ee74154ea51b1b3224b48326545ac 350 PANTHER PTHR13748:SF10 1 343 1.2E-126 T 19-04-2016 IPR012824 Cobalamin (vitamin B12) biosynthesis CobW GO:0009236 UniPathway: UPA00148 APA12_RS11430 826ee74154ea51b1b3224b48326545ac 350 SUPERFAMILY SSF52540 6 210 9.58E-33 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS11430 826ee74154ea51b1b3224b48326545ac 350 SUPERFAMILY SSF90002 254 346 1.44E-16 T 19-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal APA12_RS11430 826ee74154ea51b1b3224b48326545ac 350 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 8 206 1.8E-57 T 19-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain APA12_RS11430 826ee74154ea51b1b3224b48326545ac 350 PANTHER PTHR13748 1 343 1.2E-126 T 19-04-2016 APA12_RS11430 826ee74154ea51b1b3224b48326545ac 350 Gene3D G3DSA:3.30.1220.10 234 344 3.8E-22 T 19-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal APA12_RS11430 826ee74154ea51b1b3224b48326545ac 350 SMART SM00833 254 347 1.0E-6 T 19-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal APA12_RS00085 fc424dd6ecc2573f567698865cc3d326 230 SUPERFAMILY SSF53067 16 114 1.75E-12 T 19-04-2016 APA12_RS00085 fc424dd6ecc2573f567698865cc3d326 230 PANTHER PTHR11735:SF11 1 141 1.4E-12 T 19-04-2016 APA12_RS00085 fc424dd6ecc2573f567698865cc3d326 230 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 23 213 1.5E-25 T 19-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 APA12_RS00085 fc424dd6ecc2573f567698865cc3d326 230 Pfam PF00814 Glycoprotease family 41 141 3.8E-12 T 19-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APA12_RS00085 fc424dd6ecc2573f567698865cc3d326 230 PANTHER PTHR11735 1 141 1.4E-12 T 19-04-2016 APA12_RS00085 fc424dd6ecc2573f567698865cc3d326 230 Gene3D G3DSA:3.30.420.40 16 147 2.6E-18 T 19-04-2016 APA12_RS09690 3bb6230b544c9236def10f2a4c95a040 695 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 422 449 1.4E-11 T 19-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 APA12_RS09690 3bb6230b544c9236def10f2a4c95a040 695 PANTHER PTHR23389 11 550 1.1E-177 T 19-04-2016 APA12_RS09690 3bb6230b544c9236def10f2a4c95a040 695 Gene3D G3DSA:2.40.50.140 333 404 1.6E-34 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS09690 3bb6230b544c9236def10f2a4c95a040 695 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 345 360 - T 19-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site APA12_RS09690 3bb6230b544c9236def10f2a4c95a040 695 SUPERFAMILY SSF50249 331 407 2.4E-26 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS09690 3bb6230b544c9236def10f2a4c95a040 695 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 23 687 6.0E-225 T 19-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 APA12_RS09690 3bb6230b544c9236def10f2a4c95a040 695 Hamap MF_01588 DNA ligase [ligA]. 14 691 48.675 T 19-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 APA12_RS09690 3bb6230b544c9236def10f2a4c95a040 695 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 620 685 4.8E-10 T 19-04-2016 IPR001357 BRCT domain APA12_RS09690 3bb6230b544c9236def10f2a4c95a040 695 Gene3D G3DSA:1.10.287.610 9 78 3.9E-21 T 19-04-2016 APA12_RS09690 3bb6230b544c9236def10f2a4c95a040 695 Gene3D G3DSA:1.10.150.20 450 519 1.6E-21 T 19-04-2016 APA12_RS09690 3bb6230b544c9236def10f2a4c95a040 695 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 131 160 - T 19-04-2016 IPR018239 NAD-dependent DNA ligase, active site APA12_RS09690 3bb6230b544c9236def10f2a4c95a040 695 Pfam PF12826 Helix-hairpin-helix motif 527 599 1.7E-9 T 19-04-2016 APA12_RS09690 3bb6230b544c9236def10f2a4c95a040 695 Gene3D G3DSA:3.30.470.30 135 266 2.8E-49 T 19-04-2016 APA12_RS09690 3bb6230b544c9236def10f2a4c95a040 695 PIRSF PIRSF001604 9 695 2.6E-227 T 19-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 APA12_RS09690 3bb6230b544c9236def10f2a4c95a040 695 SUPERFAMILY SSF52113 616 689 2.62E-17 T 19-04-2016 IPR001357 BRCT domain APA12_RS09690 3bb6230b544c9236def10f2a4c95a040 695 PANTHER PTHR23389:SF9 11 550 1.1E-177 T 19-04-2016 APA12_RS09690 3bb6230b544c9236def10f2a4c95a040 695 SUPERFAMILY SSF47781 418 605 9.34E-48 T 19-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APA12_RS09690 3bb6230b544c9236def10f2a4c95a040 695 Gene3D G3DSA:3.40.50.10190 616 693 2.4E-22 T 19-04-2016 IPR001357 BRCT domain APA12_RS09690 3bb6230b544c9236def10f2a4c95a040 695 SMART SM00292 617 694 2.7E-10 T 19-04-2016 IPR001357 BRCT domain APA12_RS09690 3bb6230b544c9236def10f2a4c95a040 695 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 336 407 6.5E-34 T 19-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 APA12_RS09690 3bb6230b544c9236def10f2a4c95a040 695 SUPERFAMILY SSF56091 11 330 3.91E-111 T 19-04-2016 APA12_RS09690 3bb6230b544c9236def10f2a4c95a040 695 Gene3D G3DSA:1.10.150.20 521 605 7.6E-20 T 19-04-2016 APA12_RS09690 3bb6230b544c9236def10f2a4c95a040 695 SMART SM00532 15 463 1.1E-238 T 19-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 APA12_RS09690 3bb6230b544c9236def10f2a4c95a040 695 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 15 332 3.0E-112 T 19-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 APA12_RS09865 e59f9414094f790cb0b30bb01f2e434e 268 PRINTS PR00395 Ribosomal protein S2 signature 197 211 1.9E-39 T 19-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS09865 e59f9414094f790cb0b30bb01f2e434e 268 PRINTS PR00395 Ribosomal protein S2 signature 89 106 1.9E-39 T 19-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS09865 e59f9414094f790cb0b30bb01f2e434e 268 PRINTS PR00395 Ribosomal protein S2 signature 159 176 1.9E-39 T 19-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS09865 e59f9414094f790cb0b30bb01f2e434e 268 PRINTS PR00395 Ribosomal protein S2 signature 8 26 1.9E-39 T 19-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS09865 e59f9414094f790cb0b30bb01f2e434e 268 PRINTS PR00395 Ribosomal protein S2 signature 176 187 1.9E-39 T 19-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS09865 e59f9414094f790cb0b30bb01f2e434e 268 PRINTS PR00395 Ribosomal protein S2 signature 39 48 1.9E-39 T 19-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS09865 e59f9414094f790cb0b30bb01f2e434e 268 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 8 19 - T 19-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 APA12_RS09865 e59f9414094f790cb0b30bb01f2e434e 268 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 7 225 1.9E-97 T 19-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 APA12_RS09865 e59f9414094f790cb0b30bb01f2e434e 268 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 159 183 - T 19-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 APA12_RS09865 e59f9414094f790cb0b30bb01f2e434e 268 PANTHER PTHR12534 2 268 1.5E-112 T 19-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 APA12_RS09865 e59f9414094f790cb0b30bb01f2e434e 268 Gene3D G3DSA:3.40.50.10490 25 101 6.6E-63 T 19-04-2016 APA12_RS09865 e59f9414094f790cb0b30bb01f2e434e 268 Gene3D G3DSA:3.40.50.10490 159 236 6.6E-63 T 19-04-2016 APA12_RS09865 e59f9414094f790cb0b30bb01f2e434e 268 Pfam PF00318 Ribosomal protein S2 11 225 3.5E-92 T 19-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS09865 e59f9414094f790cb0b30bb01f2e434e 268 SUPERFAMILY SSF52313 8 233 3.92E-90 T 19-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain APA12_RS09865 e59f9414094f790cb0b30bb01f2e434e 268 Gene3D G3DSA:1.10.287.610 102 153 5.3E-21 T 19-04-2016 APA12_RS09865 e59f9414094f790cb0b30bb01f2e434e 268 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 4 226 40.918 T 19-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 APA12_RS13030 499b916c45b7f6a5e5c8c223520a8d36 194 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 1 163 1.8E-40 T 19-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APA12_RS13030 499b916c45b7f6a5e5c8c223520a8d36 194 PANTHER PTHR18895:SF60 2 159 1.6E-28 T 19-04-2016 APA12_RS13030 499b916c45b7f6a5e5c8c223520a8d36 194 Pfam PF03602 Conserved hypothetical protein 95 2 162 7.2E-47 T 19-04-2016 APA12_RS13030 499b916c45b7f6a5e5c8c223520a8d36 194 PIRSF PIRSF004553 1 172 6.8E-45 T 19-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APA12_RS13030 499b916c45b7f6a5e5c8c223520a8d36 194 PANTHER PTHR18895 2 159 1.6E-28 T 19-04-2016 APA12_RS13030 499b916c45b7f6a5e5c8c223520a8d36 194 Gene3D G3DSA:3.40.50.150 1 193 1.2E-53 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS13030 499b916c45b7f6a5e5c8c223520a8d36 194 SUPERFAMILY SSF53335 2 162 3.87E-40 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS08680 4f527fea359ecfc05abeae4c9f594780 127 ProSitePatterns PS01015 Ribosomal protein L19 signature. 90 105 - T 19-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS08680 4f527fea359ecfc05abeae4c9f594780 127 SUPERFAMILY SSF50104 2 120 4.01E-45 T 19-04-2016 IPR008991 Translation protein SH3-like domain APA12_RS08680 4f527fea359ecfc05abeae4c9f594780 127 Pfam PF01245 Ribosomal protein L19 3 117 1.9E-47 T 19-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS08680 4f527fea359ecfc05abeae4c9f594780 127 PIRSF PIRSF002191 1 126 7.3E-52 T 19-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS08680 4f527fea359ecfc05abeae4c9f594780 127 PRINTS PR00061 Ribosomal protein L19 signature 92 117 3.3E-35 T 19-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS08680 4f527fea359ecfc05abeae4c9f594780 127 PRINTS PR00061 Ribosomal protein L19 signature 38 67 3.3E-35 T 19-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS08680 4f527fea359ecfc05abeae4c9f594780 127 PRINTS PR00061 Ribosomal protein L19 signature 8 37 3.3E-35 T 19-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS08680 4f527fea359ecfc05abeae4c9f594780 127 PANTHER PTHR15680 2 124 5.6E-53 T 19-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS08680 4f527fea359ecfc05abeae4c9f594780 127 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 118 31.167 T 19-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS08680 4f527fea359ecfc05abeae4c9f594780 127 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 2 117 1.4E-46 T 19-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS06015 322fc0c18ab99dcdb167fe0fb73db562 419 Gene3D G3DSA:3.40.50.720 123 300 3.1E-62 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS06015 322fc0c18ab99dcdb167fe0fb73db562 419 PANTHER PTHR10996 3 372 1.8E-216 T 19-04-2016 APA12_RS06015 322fc0c18ab99dcdb167fe0fb73db562 419 PANTHER PTHR10996:SF18 3 372 1.8E-216 T 19-04-2016 IPR029015 D-3-phosphoglycerate dehydrogenase, type2 GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|UniPathway: UPA00135 APA12_RS06015 322fc0c18ab99dcdb167fe0fb73db562 419 Gene3D G3DSA:3.30.70.260 326 415 1.2E-20 T 19-04-2016 APA12_RS06015 322fc0c18ab99dcdb167fe0fb73db562 419 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 232 248 - T 19-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APA12_RS06015 322fc0c18ab99dcdb167fe0fb73db562 419 SUPERFAMILY SSF51735 111 298 3.65E-56 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS06015 322fc0c18ab99dcdb167fe0fb73db562 419 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 157 184 - T 19-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 APA12_RS06015 322fc0c18ab99dcdb167fe0fb73db562 419 Gene3D G3DSA:3.40.50.720 11 122 1.9E-36 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS06015 322fc0c18ab99dcdb167fe0fb73db562 419 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 203 225 - T 19-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APA12_RS06015 322fc0c18ab99dcdb167fe0fb73db562 419 SUPERFAMILY SSF55021 335 415 5.95E-12 T 19-04-2016 APA12_RS06015 322fc0c18ab99dcdb167fe0fb73db562 419 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 16 324 5.2E-34 T 19-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 APA12_RS06015 322fc0c18ab99dcdb167fe0fb73db562 419 SUPERFAMILY SSF52283 11 134 4.68E-46 T 19-04-2016 APA12_RS06015 322fc0c18ab99dcdb167fe0fb73db562 419 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 121 297 1.5E-52 T 19-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 APA12_RS05620 972a884366855ddffba9593252c0188f 112 SUPERFAMILY SSF82657 13 110 1.31E-25 T 19-04-2016 IPR002634 BolA protein APA12_RS05620 972a884366855ddffba9593252c0188f 112 Gene3D G3DSA:3.30.70.1500 16 104 1.7E-25 T 19-04-2016 APA12_RS05620 972a884366855ddffba9593252c0188f 112 PIRSF PIRSF003113 1 112 3.5E-29 T 19-04-2016 IPR002634 BolA protein APA12_RS05620 972a884366855ddffba9593252c0188f 112 PANTHER PTHR12735 1 110 5.2E-23 T 19-04-2016 APA12_RS05620 972a884366855ddffba9593252c0188f 112 PANTHER PTHR12735:SF3 1 110 5.2E-23 T 19-04-2016 APA12_RS05620 972a884366855ddffba9593252c0188f 112 Pfam PF01722 BolA-like protein 25 107 4.1E-28 T 19-04-2016 IPR002634 BolA protein APA12_RS07850 40ecf24dfae70d73db866f00b0011ecf 377 SUPERFAMILY SSF47203 228 360 1.68E-7 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APA12_RS07850 40ecf24dfae70d73db866f00b0011ecf 377 PANTHER PTHR10909:SF284 73 369 2.4E-37 T 19-04-2016 APA12_RS07850 40ecf24dfae70d73db866f00b0011ecf 377 SUPERFAMILY SSF56645 35 223 3.53E-16 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 APA12_RS07850 40ecf24dfae70d73db866f00b0011ecf 377 PANTHER PTHR10909 73 369 2.4E-37 T 19-04-2016 APA12_RS07850 40ecf24dfae70d73db866f00b0011ecf 377 Gene3D G3DSA:1.20.140.10 215 370 2.2E-9 T 19-04-2016 APA12_RS07850 40ecf24dfae70d73db866f00b0011ecf 377 Gene3D G3DSA:1.10.540.10 35 123 3.3E-4 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 APA12_RS07850 40ecf24dfae70d73db866f00b0011ecf 377 Gene3D G3DSA:2.40.110.10 137 214 1.4E-7 T 19-04-2016 APA12_RS06525 eb882f51d817ec607dbfc30771e6eb67 168 TIGRFAM TIGR03164 UHCUDC: OHCU decarboxylase 11 164 1.1E-56 T 19-04-2016 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 GO:0019428 KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 APA12_RS06525 eb882f51d817ec607dbfc30771e6eb67 168 Gene3D G3DSA:1.10.3330.10 8 167 1.8E-58 T 19-04-2016 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 APA12_RS06525 eb882f51d817ec607dbfc30771e6eb67 168 Pfam PF09349 OHCU decarboxylase 7 163 4.2E-48 T 19-04-2016 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 APA12_RS06525 eb882f51d817ec607dbfc30771e6eb67 168 SUPERFAMILY SSF158694 3 165 1.57E-52 T 19-04-2016 APA12_RS09745 a0cc9471176fbc1ed04f8dff516700ce 209 PANTHER PTHR11080 19 181 8.4E-55 T 19-04-2016 APA12_RS09745 a0cc9471176fbc1ed04f8dff516700ce 209 Gene3D G3DSA:3.40.50.850 16 194 1.5E-53 T 19-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APA12_RS09745 a0cc9471176fbc1ed04f8dff516700ce 209 SUPERFAMILY SSF52499 12 180 9.42E-41 T 19-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APA12_RS09745 a0cc9471176fbc1ed04f8dff516700ce 209 Pfam PF00857 Isochorismatase family 19 181 2.1E-25 T 19-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APA12_RS09745 a0cc9471176fbc1ed04f8dff516700ce 209 PANTHER PTHR11080:SF2 19 181 8.4E-55 T 19-04-2016 APA12_RS02120 f33848ca4c1e5d5cf44281f5d4369090 570 PANTHER PTHR10110:SF120 1 452 7.9E-120 T 19-04-2016 APA12_RS02120 f33848ca4c1e5d5cf44281f5d4369090 570 PANTHER PTHR10110:SF120 469 545 7.9E-120 T 19-04-2016 APA12_RS02120 f33848ca4c1e5d5cf44281f5d4369090 570 PANTHER PTHR10110 1 452 7.9E-120 T 19-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 APA12_RS02120 f33848ca4c1e5d5cf44281f5d4369090 570 PANTHER PTHR10110 469 545 7.9E-120 T 19-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 APA12_RS02120 f33848ca4c1e5d5cf44281f5d4369090 570 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 7 556 5.9E-99 T 19-04-2016 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 APA12_RS02120 f33848ca4c1e5d5cf44281f5d4369090 570 Pfam PF00999 Sodium/hydrogen exchanger family 8 413 1.1E-58 T 19-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 APA12_RS05500 0a4ad6a5b559914f5fcfc6a2bdbf633e 432 PIRSF PIRSF000521 45 432 1.7E-27 T 19-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APA12_RS05500 0a4ad6a5b559914f5fcfc6a2bdbf633e 432 PANTHER PTHR11986 27 432 5.7E-176 T 19-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APA12_RS05500 0a4ad6a5b559914f5fcfc6a2bdbf633e 432 Pfam PF00202 Aminotransferase class-III 35 431 5.7E-119 T 19-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APA12_RS05500 0a4ad6a5b559914f5fcfc6a2bdbf633e 432 PANTHER PTHR11986:SF8 27 432 5.7E-176 T 19-04-2016 APA12_RS05500 0a4ad6a5b559914f5fcfc6a2bdbf633e 432 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 251 288 - T 19-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APA12_RS05500 0a4ad6a5b559914f5fcfc6a2bdbf633e 432 SUPERFAMILY SSF53383 20 431 3.38E-117 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APA12_RS05500 0a4ad6a5b559914f5fcfc6a2bdbf633e 432 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 28 431 7.9E-164 T 19-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 APA12_RS05500 0a4ad6a5b559914f5fcfc6a2bdbf633e 432 Gene3D G3DSA:3.90.1150.10 342 431 2.9E-44 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APA12_RS05500 0a4ad6a5b559914f5fcfc6a2bdbf633e 432 Gene3D G3DSA:3.90.1150.10 23 76 2.9E-44 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APA12_RS05500 0a4ad6a5b559914f5fcfc6a2bdbf633e 432 Gene3D G3DSA:3.40.640.10 77 339 1.9E-87 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APA12_RS01460 2e82d9a6b63d1a51ddcbc9f35832bbc3 634 SUPERFAMILY SSF53067 186 377 2.14E-67 T 19-04-2016 APA12_RS01460 2e82d9a6b63d1a51ddcbc9f35832bbc3 634 SUPERFAMILY SSF100920 379 535 1.57E-62 T 19-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain APA12_RS01460 2e82d9a6b63d1a51ddcbc9f35832bbc3 634 Gene3D G3DSA:3.30.420.40 314 356 3.8E-36 T 19-04-2016 APA12_RS01460 2e82d9a6b63d1a51ddcbc9f35832bbc3 634 Gene3D G3DSA:3.30.420.40 192 224 3.8E-36 T 19-04-2016 APA12_RS01460 2e82d9a6b63d1a51ddcbc9f35832bbc3 634 Gene3D G3DSA:2.60.34.10 385 527 2.6E-73 T 19-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain APA12_RS01460 2e82d9a6b63d1a51ddcbc9f35832bbc3 634 Gene3D G3DSA:1.20.1270.10 528 598 1.3E-26 T 19-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain APA12_RS01460 2e82d9a6b63d1a51ddcbc9f35832bbc3 634 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 19-04-2016 IPR018181 Heat shock protein 70, conserved site APA12_RS01460 2e82d9a6b63d1a51ddcbc9f35832bbc3 634 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 332 346 - T 19-04-2016 IPR018181 Heat shock protein 70, conserved site APA12_RS01460 2e82d9a6b63d1a51ddcbc9f35832bbc3 634 SUPERFAMILY SSF53067 4 184 1.33E-66 T 19-04-2016 APA12_RS01460 2e82d9a6b63d1a51ddcbc9f35832bbc3 634 Gene3D G3DSA:3.90.640.10 225 310 2.5E-31 T 19-04-2016 APA12_RS01460 2e82d9a6b63d1a51ddcbc9f35832bbc3 634 PANTHER PTHR19375 2 632 0.0 T 19-04-2016 APA12_RS01460 2e82d9a6b63d1a51ddcbc9f35832bbc3 634 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 19-04-2016 IPR018181 Heat shock protein 70, conserved site APA12_RS01460 2e82d9a6b63d1a51ddcbc9f35832bbc3 634 Gene3D G3DSA:3.30.420.40 4 52 2.9E-64 T 19-04-2016 APA12_RS01460 2e82d9a6b63d1a51ddcbc9f35832bbc3 634 Gene3D G3DSA:3.30.420.40 119 191 2.9E-64 T 19-04-2016 APA12_RS01460 2e82d9a6b63d1a51ddcbc9f35832bbc3 634 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 628 37.464 T 19-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 APA12_RS01460 2e82d9a6b63d1a51ddcbc9f35832bbc3 634 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 598 4.6E-298 T 19-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 APA12_RS01460 2e82d9a6b63d1a51ddcbc9f35832bbc3 634 Pfam PF00012 Hsp70 protein 4 598 5.4E-273 T 19-04-2016 IPR013126 Heat shock protein 70 family APA12_RS01460 2e82d9a6b63d1a51ddcbc9f35832bbc3 634 PRINTS PR00301 70kDa heat shock protein signature 197 207 1.3E-80 T 19-04-2016 IPR013126 Heat shock protein 70 family APA12_RS01460 2e82d9a6b63d1a51ddcbc9f35832bbc3 634 PRINTS PR00301 70kDa heat shock protein signature 383 402 1.3E-80 T 19-04-2016 IPR013126 Heat shock protein 70 family APA12_RS01460 2e82d9a6b63d1a51ddcbc9f35832bbc3 634 PRINTS PR00301 70kDa heat shock protein signature 54 62 1.3E-80 T 19-04-2016 IPR013126 Heat shock protein 70 family APA12_RS01460 2e82d9a6b63d1a51ddcbc9f35832bbc3 634 PRINTS PR00301 70kDa heat shock protein signature 464 480 1.3E-80 T 19-04-2016 IPR013126 Heat shock protein 70 family APA12_RS01460 2e82d9a6b63d1a51ddcbc9f35832bbc3 634 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.3E-80 T 19-04-2016 IPR013126 Heat shock protein 70 family APA12_RS01460 2e82d9a6b63d1a51ddcbc9f35832bbc3 634 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.3E-80 T 19-04-2016 IPR013126 Heat shock protein 70 family APA12_RS01460 2e82d9a6b63d1a51ddcbc9f35832bbc3 634 PRINTS PR00301 70kDa heat shock protein signature 360 380 1.3E-80 T 19-04-2016 IPR013126 Heat shock protein 70 family APA12_RS01460 2e82d9a6b63d1a51ddcbc9f35832bbc3 634 PRINTS PR00301 70kDa heat shock protein signature 329 345 1.3E-80 T 19-04-2016 IPR013126 Heat shock protein 70 family APA12_RS01460 2e82d9a6b63d1a51ddcbc9f35832bbc3 634 PRINTS PR00301 70kDa heat shock protein signature 138 158 1.3E-80 T 19-04-2016 IPR013126 Heat shock protein 70 family APA12_RS01460 2e82d9a6b63d1a51ddcbc9f35832bbc3 634 PANTHER PTHR19375:SF173 2 632 0.0 T 19-04-2016 APA12_RS01460 2e82d9a6b63d1a51ddcbc9f35832bbc3 634 Gene3D G3DSA:3.30.30.30 53 108 7.7E-29 T 19-04-2016 APA12_RS06385 276376e5c322d55dfbbe4be555d335cc 197 Gene3D G3DSA:1.10.1740.10 3 74 3.1E-17 T 19-04-2016 APA12_RS06385 276376e5c322d55dfbbe4be555d335cc 197 PANTHER PTHR30173 3 162 2.4E-31 T 19-04-2016 APA12_RS06385 276376e5c322d55dfbbe4be555d335cc 197 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 154 3.4E-22 T 19-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS06385 276376e5c322d55dfbbe4be555d335cc 197 Gene3D G3DSA:1.10.10.10 94 156 1.7E-21 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS06385 276376e5c322d55dfbbe4be555d335cc 197 SUPERFAMILY SSF88659 94 153 2.11E-15 T 19-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS06385 276376e5c322d55dfbbe4be555d335cc 197 Pfam PF04542 Sigma-70 region 2 13 74 1.7E-11 T 19-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS06385 276376e5c322d55dfbbe4be555d335cc 197 PANTHER PTHR30173:SF6 3 162 2.4E-31 T 19-04-2016 APA12_RS06385 276376e5c322d55dfbbe4be555d335cc 197 Pfam PF08281 Sigma-70, region 4 100 152 1.4E-15 T 19-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS06385 276376e5c322d55dfbbe4be555d335cc 197 SUPERFAMILY SSF88946 4 80 1.18E-15 T 19-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS01015 bfac8ed339c1ce6aff98f43ed22d9b56 298 Pfam PF02153 Prephenate dehydrogenase 36 280 1.5E-75 T 19-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 APA12_RS01015 bfac8ed339c1ce6aff98f43ed22d9b56 298 PANTHER PTHR21363:SF0 1 297 1.2E-72 T 19-04-2016 APA12_RS01015 bfac8ed339c1ce6aff98f43ed22d9b56 298 SUPERFAMILY SSF51735 12 178 4.15E-46 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS01015 bfac8ed339c1ce6aff98f43ed22d9b56 298 Gene3D G3DSA:3.40.50.720 10 183 3.7E-44 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS01015 bfac8ed339c1ce6aff98f43ed22d9b56 298 PANTHER PTHR21363 1 297 1.2E-72 T 19-04-2016 APA12_RS01015 bfac8ed339c1ce6aff98f43ed22d9b56 298 SUPERFAMILY SSF48179 182 293 1.81E-33 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APA12_RS08945 0ddb101d7da2d81b747e2761686886a5 437 PANTHER PTHR11374 1 437 1.5E-213 T 19-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 APA12_RS08945 0ddb101d7da2d81b747e2761686886a5 437 SUPERFAMILY SSF52413 305 431 7.85E-37 T 19-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 APA12_RS08945 0ddb101d7da2d81b747e2761686886a5 437 PIRSF PIRSF000124 1 436 2.2E-134 T 19-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 APA12_RS08945 0ddb101d7da2d81b747e2761686886a5 437 Gene3D G3DSA:3.40.50.720 1 205 3.4E-68 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS08945 0ddb101d7da2d81b747e2761686886a5 437 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 174 4.7E-62 T 19-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 APA12_RS08945 0ddb101d7da2d81b747e2761686886a5 437 SUPERFAMILY SSF51735 2 207 7.89E-48 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS08945 0ddb101d7da2d81b747e2761686886a5 437 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 2 417 1.4E-130 T 19-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 APA12_RS08945 0ddb101d7da2d81b747e2761686886a5 437 Gene3D G3DSA:3.40.50.720 234 437 1.4E-70 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS08945 0ddb101d7da2d81b747e2761686886a5 437 PIRSF PIRSF500134 1 437 6.5E-169 T 19-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 APA12_RS08945 0ddb101d7da2d81b747e2761686886a5 437 Gene3D G3DSA:1.20.5.100 206 233 6.9E-19 T 19-04-2016 APA12_RS08945 0ddb101d7da2d81b747e2761686886a5 437 SUPERFAMILY SSF48179 203 299 4.42E-32 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APA12_RS08945 0ddb101d7da2d81b747e2761686886a5 437 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 319 421 1.6E-30 T 19-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 APA12_RS08945 0ddb101d7da2d81b747e2761686886a5 437 SMART SM00984 319 421 4.0E-47 T 19-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 APA12_RS08945 0ddb101d7da2d81b747e2761686886a5 437 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 203 295 2.7E-36 T 19-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 APA12_RS08945 0ddb101d7da2d81b747e2761686886a5 437 PANTHER PTHR11374:SF18 1 437 1.5E-213 T 19-04-2016 APA12_RS12820 07b68babce5baa559e262a1f717984d3 525 Pfam PF04966 Carbohydrate-selective porin, OprB family 131 525 7.2E-90 T 19-04-2016 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 APA12_RS12820 07b68babce5baa559e262a1f717984d3 525 PANTHER PTHR37944 91 525 7.2E-57 T 19-04-2016 APA12_RS12820 07b68babce5baa559e262a1f717984d3 525 PANTHER PTHR37944:SF2 91 525 7.2E-57 T 19-04-2016 APA12_RS09925 24db96940249a14f6d8954d7fb0c0081 400 PANTHER PTHR11751:SF306 14 397 8.5E-156 T 19-04-2016 APA12_RS09925 24db96940249a14f6d8954d7fb0c0081 400 Gene3D G3DSA:3.40.640.10 45 275 8.3E-70 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APA12_RS09925 24db96940249a14f6d8954d7fb0c0081 400 Pfam PF00155 Aminotransferase class I and II 32 392 4.0E-76 T 19-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APA12_RS09925 24db96940249a14f6d8954d7fb0c0081 400 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 19-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 APA12_RS09925 24db96940249a14f6d8954d7fb0c0081 400 PANTHER PTHR11751 14 397 8.5E-156 T 19-04-2016 APA12_RS09925 24db96940249a14f6d8954d7fb0c0081 400 Gene3D G3DSA:3.90.1150.10 276 398 4.2E-49 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APA12_RS09925 24db96940249a14f6d8954d7fb0c0081 400 SUPERFAMILY SSF53383 1 398 7.18E-114 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APA12_RS04690 72e155d81181b7e71062c6ea06bdf50e 158 Gene3D G3DSA:1.10.455.10 9 158 2.8E-63 T 19-04-2016 IPR023798 Ribosomal protein S7 domain APA12_RS04690 72e155d81181b7e71062c6ea06bdf50e 158 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 19-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 APA12_RS04690 72e155d81181b7e71062c6ea06bdf50e 158 PIRSF PIRSF002122 2 158 1.5E-56 T 19-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 APA12_RS04690 72e155d81181b7e71062c6ea06bdf50e 158 SUPERFAMILY SSF47973 3 151 3.27E-57 T 19-04-2016 IPR023798 Ribosomal protein S7 domain APA12_RS04690 72e155d81181b7e71062c6ea06bdf50e 158 Pfam PF00177 Ribosomal protein S7p/S5e 1 151 1.3E-64 T 19-04-2016 IPR023798 Ribosomal protein S7 domain APA12_RS04690 72e155d81181b7e71062c6ea06bdf50e 158 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 158 35.85 T 19-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 APA12_RS04690 72e155d81181b7e71062c6ea06bdf50e 158 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 158 1.6E-67 T 19-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 APA12_RS04690 72e155d81181b7e71062c6ea06bdf50e 158 PANTHER PTHR11205 1 158 2.3E-84 T 19-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 APA12_RS13200 299a1310d3a0520d3ec1f7411d1ea722 456 PANTHER PTHR10890 7 456 1.1E-203 T 19-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APA12_RS13200 299a1310d3a0520d3ec1f7411d1ea722 456 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 12 455 2.4E-145 T 19-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 APA12_RS13200 299a1310d3a0520d3ec1f7411d1ea722 456 SUPERFAMILY SSF47323 335 455 1.96E-31 T 19-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS13200 299a1310d3a0520d3ec1f7411d1ea722 456 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 231 252 2.4E-29 T 19-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APA12_RS13200 299a1310d3a0520d3ec1f7411d1ea722 456 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 200 218 2.4E-29 T 19-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APA12_RS13200 299a1310d3a0520d3ec1f7411d1ea722 456 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 71 80 2.4E-29 T 19-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APA12_RS13200 299a1310d3a0520d3ec1f7411d1ea722 456 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 35 46 2.4E-29 T 19-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APA12_RS13200 299a1310d3a0520d3ec1f7411d1ea722 456 Pfam PF09190 DALR domain 347 400 2.5E-8 T 19-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 APA12_RS13200 299a1310d3a0520d3ec1f7411d1ea722 456 Gene3D G3DSA:1.20.120.640 318 371 1.3E-8 T 19-04-2016 APA12_RS13200 299a1310d3a0520d3ec1f7411d1ea722 456 SMART SM00840 346 400 6.3E-14 T 19-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 APA12_RS13200 299a1310d3a0520d3ec1f7411d1ea722 456 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 12 456 36.602 T 19-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 APA12_RS13200 299a1310d3a0520d3ec1f7411d1ea722 456 SUPERFAMILY SSF52374 14 323 1.61E-88 T 19-04-2016 APA12_RS13200 299a1310d3a0520d3ec1f7411d1ea722 456 Gene3D G3DSA:3.40.50.620 29 315 4.8E-102 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS13200 299a1310d3a0520d3ec1f7411d1ea722 456 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 25 323 3.3E-117 T 19-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 APA12_RS00685 67c611a06c5db0487a009026f134addf 344 SUPERFAMILY SSF53850 39 343 3.82E-79 T 19-04-2016 APA12_RS00685 67c611a06c5db0487a009026f134addf 344 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 162 170 - T 19-04-2016 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 APA12_RS00685 67c611a06c5db0487a009026f134addf 344 Pfam PF13531 Bacterial extracellular solute-binding protein 57 297 7.9E-41 T 19-04-2016 APA12_RS00685 67c611a06c5db0487a009026f134addf 344 Gene3D G3DSA:3.40.190.10 131 295 3.3E-73 T 19-04-2016 APA12_RS00685 67c611a06c5db0487a009026f134addf 344 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 35 342 6.4E-133 T 19-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 APA12_RS00685 67c611a06c5db0487a009026f134addf 344 PANTHER PTHR30368 33 344 4.1E-163 T 19-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 APA12_RS00685 67c611a06c5db0487a009026f134addf 344 PANTHER PTHR30368:SF2 33 344 4.1E-163 T 19-04-2016 APA12_RS08265 c39842b17eba682ec04a44876d343752 646 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 69 126 2.2E-18 T 19-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal APA12_RS08265 c39842b17eba682ec04a44876d343752 646 PANTHER PTHR22773 1 597 1.6E-244 T 19-04-2016 APA12_RS08265 c39842b17eba682ec04a44876d343752 646 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 277 299 1.6E-8 T 19-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 APA12_RS08265 c39842b17eba682ec04a44876d343752 646 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 431 453 1.6E-8 T 19-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 APA12_RS08265 c39842b17eba682ec04a44876d343752 646 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 88 108 1.6E-8 T 19-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 APA12_RS08265 c39842b17eba682ec04a44876d343752 646 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 115 135 2.9E-60 T 19-04-2016 APA12_RS08265 c39842b17eba682ec04a44876d343752 646 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 259 285 2.9E-60 T 19-04-2016 APA12_RS08265 c39842b17eba682ec04a44876d343752 646 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 432 451 2.9E-60 T 19-04-2016 APA12_RS08265 c39842b17eba682ec04a44876d343752 646 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 237 258 2.9E-60 T 19-04-2016 APA12_RS08265 c39842b17eba682ec04a44876d343752 646 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 327 339 2.9E-60 T 19-04-2016 APA12_RS08265 c39842b17eba682ec04a44876d343752 646 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 162 183 2.9E-60 T 19-04-2016 APA12_RS08265 c39842b17eba682ec04a44876d343752 646 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 86 111 2.9E-60 T 19-04-2016 APA12_RS08265 c39842b17eba682ec04a44876d343752 646 PANTHER PTHR22773:SF50 1 597 1.6E-244 T 19-04-2016 APA12_RS08265 c39842b17eba682ec04a44876d343752 646 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 7 643 2.6E-236 T 19-04-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 APA12_RS08265 c39842b17eba682ec04a44876d343752 646 Pfam PF00361 Proton-conducting membrane transporter 138 431 2.2E-89 T 19-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 APA12_RS12925 34292419bb00f52dafb4cbd8ea12f0fd 231 Pfam PF04390 Lipopolysaccharide-assembly 22 173 2.3E-15 T 19-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 APA12_RS03260 435fcc66168c67644432809e6740003e 767 Pfam PF13291 ACT domain 692 764 2.5E-18 T 19-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 APA12_RS03260 435fcc66168c67644432809e6740003e 767 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 52 761 2.7E-210 T 19-04-2016 IPR004811 RelA/SpoT family GO:0015969 APA12_RS03260 435fcc66168c67644432809e6740003e 767 SUPERFAMILY SSF109604 31 217 3.45E-68 T 19-04-2016 APA12_RS03260 435fcc66168c67644432809e6740003e 767 SMART SM00954 263 375 1.6E-62 T 19-04-2016 IPR007685 RelA/SpoT GO:0015969 APA12_RS03260 435fcc66168c67644432809e6740003e 767 SMART SM00471 67 179 5.5E-9 T 19-04-2016 IPR003607 HD/PDEase domain APA12_RS03260 435fcc66168c67644432809e6740003e 767 Gene3D G3DSA:3.30.460.10 205 354 2.9E-43 T 19-04-2016 APA12_RS03260 435fcc66168c67644432809e6740003e 767 Gene3D G3DSA:3.10.20.30 419 480 3.9E-23 T 19-04-2016 IPR012675 Beta-grasp domain APA12_RS03260 435fcc66168c67644432809e6740003e 767 PANTHER PTHR21262 3 767 3.1E-303 T 19-04-2016 APA12_RS03260 435fcc66168c67644432809e6740003e 767 Pfam PF04607 Region found in RelA / SpoT proteins 263 374 3.0E-36 T 19-04-2016 IPR007685 RelA/SpoT GO:0015969 APA12_RS03260 435fcc66168c67644432809e6740003e 767 SUPERFAMILY SSF81271 407 479 7.63E-22 T 19-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 APA12_RS03260 435fcc66168c67644432809e6740003e 767 SUPERFAMILY SSF81301 207 424 2.13E-56 T 19-04-2016 APA12_RS03260 435fcc66168c67644432809e6740003e 767 Gene3D G3DSA:3.30.70.260 693 762 1.6E-6 T 19-04-2016 APA12_RS03260 435fcc66168c67644432809e6740003e 767 Pfam PF13328 HD domain 52 202 6.8E-48 T 19-04-2016 IPR003607 HD/PDEase domain APA12_RS03260 435fcc66168c67644432809e6740003e 767 Pfam PF02824 TGS domain 421 479 2.9E-21 T 19-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 APA12_RS03260 435fcc66168c67644432809e6740003e 767 PANTHER PTHR21262:SF0 3 767 3.1E-303 T 19-04-2016 APA12_RS12495 d6ef4db7f2c121228e8afd9dedf8d2e7 193 Pfam PF00430 ATP synthase B/B' CF(0) 43 169 1.8E-16 T 19-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 APA12_RS12495 d6ef4db7f2c121228e8afd9dedf8d2e7 193 Hamap MF_01398 ATP synthase subunit b [atpF]. 16 187 8.91 T 19-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 APA12_RS08255 348d14f222ea2def1694bcbeead44e70 247 PANTHER PTHR12835 7 241 6.6E-31 T 19-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 APA12_RS08255 348d14f222ea2def1694bcbeead44e70 247 Gene3D G3DSA:2.30.30.100 205 243 3.8E-6 T 19-04-2016 APA12_RS08255 348d14f222ea2def1694bcbeead44e70 247 Gene3D G3DSA:3.30.930.10 2 195 8.8E-44 T 19-04-2016 APA12_RS08255 348d14f222ea2def1694bcbeead44e70 247 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 11 243 2.9E-33 T 19-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 APA12_RS08255 348d14f222ea2def1694bcbeead44e70 247 SUPERFAMILY SSF55681 3 195 9.94E-38 T 19-04-2016 APA12_RS08255 348d14f222ea2def1694bcbeead44e70 247 Pfam PF02237 Biotin protein ligase C terminal domain 213 243 7.0E-7 T 19-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 APA12_RS08255 348d14f222ea2def1694bcbeead44e70 247 Pfam PF03099 Biotin/lipoate A/B protein ligase family 30 129 3.3E-10 T 19-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 APA12_RS11635 64feb6d91ab7c81328a647a47574aa76 423 SUPERFAMILY SSF56349 92 394 4.12E-39 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APA12_RS11635 64feb6d91ab7c81328a647a47574aa76 423 Pfam PF13356 Domain of unknown function (DUF4102) 7 72 3.7E-15 T 19-04-2016 IPR025166 Domain of unknown function DUF4102 APA12_RS11635 64feb6d91ab7c81328a647a47574aa76 423 PANTHER PTHR30629 2 412 5.0E-52 T 19-04-2016 APA12_RS11635 64feb6d91ab7c81328a647a47574aa76 423 Gene3D G3DSA:1.10.443.10 195 383 4.9E-21 T 19-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APA12_RS11635 64feb6d91ab7c81328a647a47574aa76 423 Pfam PF00589 Phage integrase family 219 372 2.7E-8 T 19-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APA12_RS11635 64feb6d91ab7c81328a647a47574aa76 423 Gene3D G3DSA:1.10.150.130 93 186 3.8E-7 T 19-04-2016 IPR023109 Integrase/recombinase, N-terminal APA12_RS11635 64feb6d91ab7c81328a647a47574aa76 423 PANTHER PTHR30629:SF2 2 412 5.0E-52 T 19-04-2016 APA12_RS01375 4f4b746df6655891d9d994e517244fbb 335 SUPERFAMILY SSF82153 101 253 8.5E-16 T 19-04-2016 IPR000782 FAS1 domain APA12_RS01375 4f4b746df6655891d9d994e517244fbb 335 Pfam PF02469 Fasciclin domain 117 246 8.1E-9 T 19-04-2016 IPR000782 FAS1 domain APA12_RS01375 4f4b746df6655891d9d994e517244fbb 335 Gene3D G3DSA:2.30.180.10 105 253 7.7E-18 T 19-04-2016 IPR000782 FAS1 domain APA12_RS13320 d1b7e5c3fef089d32e0e36730da2aeb1 908 SUPERFAMILY SSF52540 7 228 2.49E-82 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS13320 d1b7e5c3fef089d32e0e36730da2aeb1 908 SUPERFAMILY SSF52540 357 404 2.49E-82 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS13320 d1b7e5c3fef089d32e0e36730da2aeb1 908 SUPERFAMILY SSF52540 405 613 1.65E-55 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS13320 d1b7e5c3fef089d32e0e36730da2aeb1 908 SMART SM00958 228 347 3.4E-70 T 19-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 APA12_RS13320 d1b7e5c3fef089d32e0e36730da2aeb1 908 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 811 0.0 T 19-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APA12_RS13320 d1b7e5c3fef089d32e0e36730da2aeb1 908 PANTHER PTHR30612 545 908 0.0 T 19-04-2016 APA12_RS13320 d1b7e5c3fef089d32e0e36730da2aeb1 908 PANTHER PTHR30612 1 509 0.0 T 19-04-2016 APA12_RS13320 d1b7e5c3fef089d32e0e36730da2aeb1 908 Gene3D G3DSA:3.90.1440.10 230 357 2.0E-43 T 19-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 APA12_RS13320 d1b7e5c3fef089d32e0e36730da2aeb1 908 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 826 20.18 T 19-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APA12_RS13320 d1b7e5c3fef089d32e0e36730da2aeb1 908 Pfam PF01043 SecA preprotein cross-linking domain 232 347 4.8E-37 T 19-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 APA12_RS13320 d1b7e5c3fef089d32e0e36730da2aeb1 908 Gene3D G3DSA:3.40.50.300 3 228 4.7E-124 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS13320 d1b7e5c3fef089d32e0e36730da2aeb1 908 Gene3D G3DSA:3.40.50.300 358 405 4.7E-124 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS13320 d1b7e5c3fef089d32e0e36730da2aeb1 908 PRINTS PR00906 SecA protein signature 365 382 4.9E-71 T 19-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APA12_RS13320 d1b7e5c3fef089d32e0e36730da2aeb1 908 PRINTS PR00906 SecA protein signature 402 415 4.9E-71 T 19-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APA12_RS13320 d1b7e5c3fef089d32e0e36730da2aeb1 908 PRINTS PR00906 SecA protein signature 63 87 4.9E-71 T 19-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APA12_RS13320 d1b7e5c3fef089d32e0e36730da2aeb1 908 PRINTS PR00906 SecA protein signature 328 350 4.9E-71 T 19-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APA12_RS13320 d1b7e5c3fef089d32e0e36730da2aeb1 908 PRINTS PR00906 SecA protein signature 170 190 4.9E-71 T 19-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APA12_RS13320 d1b7e5c3fef089d32e0e36730da2aeb1 908 PRINTS PR00906 SecA protein signature 101 115 4.9E-71 T 19-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APA12_RS13320 d1b7e5c3fef089d32e0e36730da2aeb1 908 PRINTS PR00906 SecA protein signature 117 127 4.9E-71 T 19-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APA12_RS13320 d1b7e5c3fef089d32e0e36730da2aeb1 908 Gene3D G3DSA:3.40.50.300 406 613 2.4E-92 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS13320 d1b7e5c3fef089d32e0e36730da2aeb1 908 Pfam PF02810 SEC-C motif 888 906 1.1E-9 T 19-04-2016 IPR004027 SEC-C motif APA12_RS13320 d1b7e5c3fef089d32e0e36730da2aeb1 908 SMART SM00957 6 391 3.6E-294 T 19-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 APA12_RS13320 d1b7e5c3fef089d32e0e36730da2aeb1 908 Gene3D G3DSA:1.10.3060.10 643 824 2.6E-52 T 19-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 APA12_RS13320 d1b7e5c3fef089d32e0e36730da2aeb1 908 SUPERFAMILY SSF81767 227 357 4.32E-42 T 19-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 APA12_RS13320 d1b7e5c3fef089d32e0e36730da2aeb1 908 Pfam PF07517 SecA DEAD-like domain 8 390 2.8E-130 T 19-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 APA12_RS13320 d1b7e5c3fef089d32e0e36730da2aeb1 908 Pfam PF07516 SecA Wing and Scaffold domain 612 823 1.5E-62 T 19-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 APA12_RS13320 d1b7e5c3fef089d32e0e36730da2aeb1 908 ProSitePatterns PS01312 SecA family signature. 489 504 - T 19-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 APA12_RS13320 d1b7e5c3fef089d32e0e36730da2aeb1 908 SUPERFAMILY SSF81886 884 896 3.66E-75 T 19-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 APA12_RS13320 d1b7e5c3fef089d32e0e36730da2aeb1 908 SUPERFAMILY SSF81886 615 834 3.66E-75 T 19-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 APA12_RS12700 ba24bd042ec4c7738078855979064140 514 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 7 415 30.263 T 19-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 APA12_RS12700 ba24bd042ec4c7738078855979064140 514 Gene3D G3DSA:3.30.300.20 284 350 1.6E-30 T 19-04-2016 IPR015946 K homology domain-like, alpha/beta APA12_RS12700 ba24bd042ec4c7738078855979064140 514 Pfam PF13184 NusA-like KH domain 234 300 4.6E-27 T 19-04-2016 IPR025249 KH domain, NusA-like GO:0003723 APA12_RS12700 ba24bd042ec4c7738078855979064140 514 PANTHER PTHR22648:SF0 6 452 2.4E-170 T 19-04-2016 APA12_RS12700 ba24bd042ec4c7738078855979064140 514 Gene3D G3DSA:2.40.50.140 133 202 8.7E-28 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS12700 ba24bd042ec4c7738078855979064140 514 SMART SM00322 305 374 0.0046 T 19-04-2016 IPR004087 K Homology domain GO:0003676 APA12_RS12700 ba24bd042ec4c7738078855979064140 514 SMART SM00322 234 297 10.0 T 19-04-2016 IPR004087 K Homology domain GO:0003676 APA12_RS12700 ba24bd042ec4c7738078855979064140 514 PANTHER PTHR22648 6 452 2.4E-170 T 19-04-2016 APA12_RS12700 ba24bd042ec4c7738078855979064140 514 Pfam PF08529 NusA N-terminal domain 9 129 1.3E-35 T 19-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 APA12_RS12700 ba24bd042ec4c7738078855979064140 514 SUPERFAMILY SSF54814 204 281 5.75E-31 T 19-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 APA12_RS12700 ba24bd042ec4c7738078855979064140 514 Pfam PF00575 S1 RNA binding domain 136 197 2.1E-5 T 19-04-2016 IPR003029 S1 domain GO:0003676 APA12_RS12700 ba24bd042ec4c7738078855979064140 514 SUPERFAMILY SSF47794 434 498 8.32E-9 T 19-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 APA12_RS12700 ba24bd042ec4c7738078855979064140 514 SUPERFAMILY SSF50249 136 203 1.29E-18 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS12700 ba24bd042ec4c7738078855979064140 514 SMART SM00316 138 204 1.0E-6 T 19-04-2016 IPR022967 RNA-binding domain, S1 APA12_RS12700 ba24bd042ec4c7738078855979064140 514 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 10 346 1.1E-133 T 19-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 APA12_RS12700 ba24bd042ec4c7738078855979064140 514 SUPERFAMILY SSF47794 353 418 9.42E-15 T 19-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 APA12_RS12700 ba24bd042ec4c7738078855979064140 514 SUPERFAMILY SSF54814 285 346 8.5E-16 T 19-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 APA12_RS12700 ba24bd042ec4c7738078855979064140 514 Pfam PF14520 Helix-hairpin-helix domain 373 414 0.0026 T 19-04-2016 APA12_RS12700 ba24bd042ec4c7738078855979064140 514 Gene3D G3DSA:3.30.1480.10 9 130 1.1E-44 T 19-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 APA12_RS12700 ba24bd042ec4c7738078855979064140 514 Gene3D G3DSA:1.10.150.20 433 501 1.1E-21 T 19-04-2016 APA12_RS12700 ba24bd042ec4c7738078855979064140 514 Gene3D G3DSA:1.10.150.20 359 422 7.1E-17 T 19-04-2016 APA12_RS12700 ba24bd042ec4c7738078855979064140 514 SUPERFAMILY SSF69705 8 130 1.96E-39 T 19-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 APA12_RS12700 ba24bd042ec4c7738078855979064140 514 Gene3D G3DSA:3.30.300.20 203 281 6.4E-37 T 19-04-2016 IPR015946 K homology domain-like, alpha/beta APA12_RS08140 e84aa7a1b33d2b2c37e3103884da91e3 320 SUPERFAMILY SSF56300 22 285 2.05E-37 T 19-04-2016 IPR029052 Metallo-dependent phosphatase-like APA12_RS08140 e84aa7a1b33d2b2c37e3103884da91e3 320 PANTHER PTHR12905:SF17 72 242 2.2E-18 T 19-04-2016 APA12_RS08140 e84aa7a1b33d2b2c37e3103884da91e3 320 PANTHER PTHR12905:SF17 22 40 2.2E-18 T 19-04-2016 APA12_RS08140 e84aa7a1b33d2b2c37e3103884da91e3 320 Gene3D G3DSA:3.60.21.10 21 281 6.0E-32 T 19-04-2016 IPR029052 Metallo-dependent phosphatase-like APA12_RS08140 e84aa7a1b33d2b2c37e3103884da91e3 320 PANTHER PTHR12905 72 242 2.2E-18 T 19-04-2016 APA12_RS08140 e84aa7a1b33d2b2c37e3103884da91e3 320 PANTHER PTHR12905 22 40 2.2E-18 T 19-04-2016 APA12_RS08140 e84aa7a1b33d2b2c37e3103884da91e3 320 Pfam PF00149 Calcineurin-like phosphoesterase 21 241 3.5E-16 T 19-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APA12_RS05000 6772e90e7810c13a012e7c0e5e0aed4b 613 Pfam PF08275 DNA primase catalytic core, N-terminal domain 122 246 8.3E-32 T 19-04-2016 IPR013264 DNA primase, catalytic core, N-terminal APA12_RS05000 6772e90e7810c13a012e7c0e5e0aed4b 613 Gene3D G3DSA:3.90.580.10 2 96 1.0E-37 T 19-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 APA12_RS05000 6772e90e7810c13a012e7c0e5e0aed4b 613 SUPERFAMILY SSF56731 110 421 8.76E-92 T 19-04-2016 APA12_RS05000 6772e90e7810c13a012e7c0e5e0aed4b 613 Pfam PF01807 CHC2 zinc finger 5 96 2.1E-33 T 19-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 APA12_RS05000 6772e90e7810c13a012e7c0e5e0aed4b 613 SUPERFAMILY SSF57783 2 95 8.16E-34 T 19-04-2016 APA12_RS05000 6772e90e7810c13a012e7c0e5e0aed4b 613 Gene3D G3DSA:3.40.1360.10 236 368 5.2E-44 T 19-04-2016 APA12_RS05000 6772e90e7810c13a012e7c0e5e0aed4b 613 TIGRFAM TIGR01391 dnaG: DNA primase 3 420 2.4E-122 T 19-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 APA12_RS05000 6772e90e7810c13a012e7c0e5e0aed4b 613 SMART SM00493 261 332 3.1E-14 T 19-04-2016 IPR006171 Toprim domain APA12_RS05000 6772e90e7810c13a012e7c0e5e0aed4b 613 Gene3D G3DSA:1.20.50.20 370 418 2.0E-4 T 19-04-2016 APA12_RS05000 6772e90e7810c13a012e7c0e5e0aed4b 613 Hamap MF_00974 DNA primase [dnaG]. 2 604 23.995 T 19-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 APA12_RS05000 6772e90e7810c13a012e7c0e5e0aed4b 613 SMART SM00400 34 86 4.3E-28 T 19-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 APA12_RS05000 6772e90e7810c13a012e7c0e5e0aed4b 613 PIRSF PIRSF002811 1 602 1.7E-127 T 19-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 APA12_RS05000 6772e90e7810c13a012e7c0e5e0aed4b 613 Pfam PF13662 Toprim domain 263 329 1.9E-17 T 19-04-2016 IPR006171 Toprim domain APA12_RS05000 6772e90e7810c13a012e7c0e5e0aed4b 613 Gene3D G3DSA:3.90.980.10 110 235 4.2E-33 T 19-04-2016 IPR013264 DNA primase, catalytic core, N-terminal APA12_RS05000 6772e90e7810c13a012e7c0e5e0aed4b 613 PANTHER PTHR30313 1 421 2.4E-129 T 19-04-2016 APA12_RS12070 23e989be6c374b01482e387eb6fe00ab 1190 SUPERFAMILY SSF56003 292 725 2.36E-114 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APA12_RS12070 23e989be6c374b01482e387eb6fe00ab 1190 Gene3D G3DSA:1.10.760.10 803 904 9.5E-16 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS12070 23e989be6c374b01482e387eb6fe00ab 1190 Gene3D G3DSA:1.10.760.10 946 1053 1.6E-10 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS12070 23e989be6c374b01482e387eb6fe00ab 1190 Gene3D G3DSA:3.90.1170.50 158 260 1.9E-21 T 19-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APA12_RS12070 23e989be6c374b01482e387eb6fe00ab 1190 SUPERFAMILY SSF56003 26 212 3.4E-32 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APA12_RS12070 23e989be6c374b01482e387eb6fe00ab 1190 SUPERFAMILY SSF46626 940 1055 9.61E-15 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS12070 23e989be6c374b01482e387eb6fe00ab 1190 Gene3D G3DSA:3.30.365.10 366 533 1.2E-33 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APA12_RS12070 23e989be6c374b01482e387eb6fe00ab 1190 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 23 139 3.8E-21 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APA12_RS12070 23e989be6c374b01482e387eb6fe00ab 1190 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 589 669 1.2E-14 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APA12_RS12070 23e989be6c374b01482e387eb6fe00ab 1190 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 293 580 1.2E-31 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APA12_RS12070 23e989be6c374b01482e387eb6fe00ab 1190 SUPERFAMILY SSF46626 1084 1173 5.76E-16 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS12070 23e989be6c374b01482e387eb6fe00ab 1190 Gene3D G3DSA:3.30.365.10 261 320 9.4E-5 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APA12_RS12070 23e989be6c374b01482e387eb6fe00ab 1190 SUPERFAMILY SSF54665 188 271 7.32E-8 T 19-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APA12_RS12070 23e989be6c374b01482e387eb6fe00ab 1190 Gene3D G3DSA:3.30.365.10 534 725 8.6E-44 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APA12_RS12070 23e989be6c374b01482e387eb6fe00ab 1190 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 1084 1163 1.2E-9 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS12070 23e989be6c374b01482e387eb6fe00ab 1190 PANTHER PTHR11908:SF22 52 731 9.0E-248 T 19-04-2016 APA12_RS12070 23e989be6c374b01482e387eb6fe00ab 1190 SUPERFAMILY SSF46626 788 926 3.92E-22 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS12070 23e989be6c374b01482e387eb6fe00ab 1190 SMART SM01008 187 273 3.1E-17 T 19-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APA12_RS12070 23e989be6c374b01482e387eb6fe00ab 1190 PANTHER PTHR11908 52 731 9.0E-248 T 19-04-2016 APA12_RS12070 23e989be6c374b01482e387eb6fe00ab 1190 Pfam PF00034 Cytochrome c 805 904 3.1E-9 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS12070 23e989be6c374b01482e387eb6fe00ab 1190 Gene3D G3DSA:3.30.365.10 27 153 1.4E-32 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APA12_RS12070 23e989be6c374b01482e387eb6fe00ab 1190 Gene3D G3DSA:1.10.760.10 1084 1172 2.6E-15 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS06975 8bcac8af618ff9369c633f8d9fee964c 302 Gene3D G3DSA:3.40.190.10 176 260 1.7E-21 T 19-04-2016 APA12_RS06975 8bcac8af618ff9369c633f8d9fee964c 302 Gene3D G3DSA:1.10.10.10 3 84 4.7E-27 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS06975 8bcac8af618ff9369c633f8d9fee964c 302 PANTHER PTHR30346:SF7 1 298 2.3E-91 T 19-04-2016 APA12_RS06975 8bcac8af618ff9369c633f8d9fee964c 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 8.2E-21 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS06975 8bcac8af618ff9369c633f8d9fee964c 302 Gene3D G3DSA:3.40.190.10 90 175 1.5E-29 T 19-04-2016 APA12_RS06975 8bcac8af618ff9369c633f8d9fee964c 302 SUPERFAMILY SSF46785 3 85 4.74E-21 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS06975 8bcac8af618ff9369c633f8d9fee964c 302 PANTHER PTHR30346 1 298 2.3E-91 T 19-04-2016 APA12_RS06975 8bcac8af618ff9369c633f8d9fee964c 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.3E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS06975 8bcac8af618ff9369c633f8d9fee964c 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.3E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS06975 8bcac8af618ff9369c633f8d9fee964c 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.3E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS06975 8bcac8af618ff9369c633f8d9fee964c 302 SUPERFAMILY SSF53850 92 282 1.07E-34 T 19-04-2016 APA12_RS06975 8bcac8af618ff9369c633f8d9fee964c 302 Pfam PF03466 LysR substrate binding domain 90 278 2.7E-36 T 19-04-2016 IPR005119 LysR, substrate-binding APA12_RS04100 94c9df48dd0766f8735c281db563ef70 299 Gene3D G3DSA:3.40.50.720 137 282 1.2E-32 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS04100 94c9df48dd0766f8735c281db563ef70 299 PIRSF PIRSF001439 2 298 8.9E-47 T 19-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin APA12_RS04100 94c9df48dd0766f8735c281db563ef70 299 PANTHER PTHR13812:SF19 17 289 4.1E-46 T 19-04-2016 APA12_RS04100 94c9df48dd0766f8735c281db563ef70 299 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 12 295 1.2E-31 T 19-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin APA12_RS04100 94c9df48dd0766f8735c281db563ef70 299 Gene3D G3DSA:3.30.1780.10 1 136 1.5E-36 T 19-04-2016 IPR023401 Ornithine cyclodeaminase, N-terminal APA12_RS04100 94c9df48dd0766f8735c281db563ef70 299 PANTHER PTHR13812 17 289 4.1E-46 T 19-04-2016 APA12_RS04100 94c9df48dd0766f8735c281db563ef70 299 SUPERFAMILY SSF51735 1 295 1.09E-64 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS01275 0f0181c488ae4cfb792b70df418b883a 283 PANTHER PTHR19288:SF3 4 266 4.3E-67 T 19-04-2016 APA12_RS01275 0f0181c488ae4cfb792b70df418b883a 283 TIGRFAM TIGR01459 HAD-SF-IIA-hyp4: HAD hydrolase, TIGR01459 family 8 249 3.0E-54 T 19-04-2016 IPR006356 HAD-superfamily hydrolase, subfamily IIA, hypothetical 3 APA12_RS01275 0f0181c488ae4cfb792b70df418b883a 283 Pfam PF13344 Haloacid dehalogenase-like hydrolase 18 114 2.5E-15 T 19-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA APA12_RS01275 0f0181c488ae4cfb792b70df418b883a 283 Gene3D G3DSA:3.40.50.1000 201 252 1.9E-31 T 19-04-2016 IPR023214 HAD-like domain APA12_RS01275 0f0181c488ae4cfb792b70df418b883a 283 Gene3D G3DSA:3.40.50.1000 4 81 1.9E-31 T 19-04-2016 IPR023214 HAD-like domain APA12_RS01275 0f0181c488ae4cfb792b70df418b883a 283 PANTHER PTHR19288 4 266 4.3E-67 T 19-04-2016 APA12_RS01275 0f0181c488ae4cfb792b70df418b883a 283 Pfam PF13242 HAD-hyrolase-like 201 258 1.1E-10 T 19-04-2016 APA12_RS01275 0f0181c488ae4cfb792b70df418b883a 283 SUPERFAMILY SSF56784 13 254 5.47E-43 T 19-04-2016 IPR023214 HAD-like domain APA12_RS01275 0f0181c488ae4cfb792b70df418b883a 283 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 18 250 9.3E-30 T 19-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA APA12_RS02055 d4fe3c59b250d16df189477c3c6687df 498 PIRSF PIRSF006603 8 448 5.5E-64 T 19-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APA12_RS02055 d4fe3c59b250d16df189477c3c6687df 498 Pfam PF01554 MatE 34 191 4.5E-18 T 19-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APA12_RS02055 d4fe3c59b250d16df189477c3c6687df 498 Pfam PF01554 MatE 249 406 6.2E-13 T 19-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APA12_RS02055 d4fe3c59b250d16df189477c3c6687df 498 PANTHER PTHR11206:SF132 15 453 3.1E-80 T 19-04-2016 APA12_RS02055 d4fe3c59b250d16df189477c3c6687df 498 PANTHER PTHR11206:SF132 480 496 3.1E-80 T 19-04-2016 APA12_RS02055 d4fe3c59b250d16df189477c3c6687df 498 PANTHER PTHR11206 15 453 3.1E-80 T 19-04-2016 APA12_RS02055 d4fe3c59b250d16df189477c3c6687df 498 PANTHER PTHR11206 480 496 3.1E-80 T 19-04-2016 APA12_RS03335 db07c69591f8c532ac5ae93834e579d3 285 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 184 269 3.2E-18 T 19-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 APA12_RS03335 db07c69591f8c532ac5ae93834e579d3 285 PANTHER PTHR23416 8 262 9.6E-98 T 19-04-2016 APA12_RS03335 db07c69591f8c532ac5ae93834e579d3 285 Gene3D G3DSA:1.20.1180.10 206 271 2.5E-11 T 19-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 APA12_RS03335 db07c69591f8c532ac5ae93834e579d3 285 PIRSF PIRSF000456 9 279 3.9E-96 T 19-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 APA12_RS03335 db07c69591f8c532ac5ae93834e579d3 285 SUPERFAMILY SSF51161 9 266 5.94E-66 T 19-04-2016 IPR011004 Trimeric LpxA-like APA12_RS03335 db07c69591f8c532ac5ae93834e579d3 285 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 9 271 40.641 T 19-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 APA12_RS03335 db07c69591f8c532ac5ae93834e579d3 285 PANTHER PTHR23416:SF8 8 262 9.6E-98 T 19-04-2016 APA12_RS03335 db07c69591f8c532ac5ae93834e579d3 285 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 43 1.9E-5 T 19-04-2016 IPR001451 Hexapeptide repeat APA12_RS03335 db07c69591f8c532ac5ae93834e579d3 285 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 113 147 1.8E-9 T 19-04-2016 IPR001451 Hexapeptide repeat APA12_RS03335 db07c69591f8c532ac5ae93834e579d3 285 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 12 269 3.6E-92 T 19-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 APA12_RS03335 db07c69591f8c532ac5ae93834e579d3 285 Gene3D G3DSA:2.160.10.10 8 199 1.8E-44 T 19-04-2016 APA12_RS06600 27d6ac503fd3fa0524ae30a313346365 299 Gene3D G3DSA:3.40.190.10 196 262 3.3E-12 T 19-04-2016 APA12_RS06600 27d6ac503fd3fa0524ae30a313346365 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 2.1E-20 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS06600 27d6ac503fd3fa0524ae30a313346365 299 SUPERFAMILY SSF53850 94 294 7.33E-40 T 19-04-2016 APA12_RS06600 27d6ac503fd3fa0524ae30a313346365 299 SUPERFAMILY SSF46785 5 114 6.96E-25 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS06600 27d6ac503fd3fa0524ae30a313346365 299 Gene3D G3DSA:3.40.190.10 86 195 2.7E-26 T 19-04-2016 APA12_RS06600 27d6ac503fd3fa0524ae30a313346365 299 PANTHER PTHR30126:SF11 5 293 2.4E-85 T 19-04-2016 APA12_RS06600 27d6ac503fd3fa0524ae30a313346365 299 PANTHER PTHR30126 5 293 2.4E-85 T 19-04-2016 APA12_RS06600 27d6ac503fd3fa0524ae30a313346365 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.1E-6 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS06600 27d6ac503fd3fa0524ae30a313346365 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.1E-6 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS06600 27d6ac503fd3fa0524ae30a313346365 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.1E-6 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS06600 27d6ac503fd3fa0524ae30a313346365 299 Pfam PF03466 LysR substrate binding domain 91 294 1.7E-42 T 19-04-2016 IPR005119 LysR, substrate-binding APA12_RS06600 27d6ac503fd3fa0524ae30a313346365 299 Gene3D G3DSA:1.10.10.10 5 85 1.8E-27 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS11460 bfbcffb37d9640d83f03f7aa43491610 339 Gene3D G3DSA:3.90.226.10 10 205 4.3E-50 T 19-04-2016 IPR029045 ClpP/crotonase-like domain APA12_RS11460 bfbcffb37d9640d83f03f7aa43491610 339 Gene3D G3DSA:3.90.226.10 251 320 4.3E-50 T 19-04-2016 IPR029045 ClpP/crotonase-like domain APA12_RS11460 bfbcffb37d9640d83f03f7aa43491610 339 PANTHER PTHR11941:SF53 1 194 2.7E-85 T 19-04-2016 APA12_RS11460 bfbcffb37d9640d83f03f7aa43491610 339 PANTHER PTHR11941:SF53 242 320 2.7E-85 T 19-04-2016 APA12_RS11460 bfbcffb37d9640d83f03f7aa43491610 339 Pfam PF16113 Enoyl-CoA hydratase/isomerase 21 337 7.5E-98 T 19-04-2016 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 APA12_RS11460 bfbcffb37d9640d83f03f7aa43491610 339 PANTHER PTHR11941 1 194 2.7E-85 T 19-04-2016 APA12_RS11460 bfbcffb37d9640d83f03f7aa43491610 339 PANTHER PTHR11941 242 320 2.7E-85 T 19-04-2016 APA12_RS11460 bfbcffb37d9640d83f03f7aa43491610 339 SUPERFAMILY SSF52096 246 323 1.36E-56 T 19-04-2016 IPR029045 ClpP/crotonase-like domain APA12_RS11460 bfbcffb37d9640d83f03f7aa43491610 339 SUPERFAMILY SSF52096 11 194 1.36E-56 T 19-04-2016 IPR029045 ClpP/crotonase-like domain APA12_RS08655 dedf61295bfd63ca92186ae5ab5050e5 174 Gene3D G3DSA:3.90.45.10 5 171 2.6E-52 T 19-04-2016 IPR023635 Peptide deformylase APA12_RS08655 dedf61295bfd63ca92186ae5ab5050e5 174 PRINTS PR01576 Peptide deformylase signature 34 63 1.4E-26 T 19-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APA12_RS08655 dedf61295bfd63ca92186ae5ab5050e5 174 PRINTS PR01576 Peptide deformylase signature 99 110 1.4E-26 T 19-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APA12_RS08655 dedf61295bfd63ca92186ae5ab5050e5 174 PRINTS PR01576 Peptide deformylase signature 111 129 1.4E-26 T 19-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APA12_RS08655 dedf61295bfd63ca92186ae5ab5050e5 174 PRINTS PR01576 Peptide deformylase signature 130 159 1.4E-26 T 19-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APA12_RS08655 dedf61295bfd63ca92186ae5ab5050e5 174 SUPERFAMILY SSF56420 1 169 3.01E-51 T 19-04-2016 IPR023635 Peptide deformylase APA12_RS08655 dedf61295bfd63ca92186ae5ab5050e5 174 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 6 169 5.8E-33 T 19-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APA12_RS08655 dedf61295bfd63ca92186ae5ab5050e5 174 PANTHER PTHR10458 1 169 9.7E-54 T 19-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APA12_RS08655 dedf61295bfd63ca92186ae5ab5050e5 174 PIRSF PIRSF004749 1 174 4.2E-47 T 19-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APA12_RS08655 dedf61295bfd63ca92186ae5ab5050e5 174 Pfam PF01327 Polypeptide deformylase 5 161 1.4E-45 T 19-04-2016 IPR023635 Peptide deformylase APA12_RS08655 dedf61295bfd63ca92186ae5ab5050e5 174 Hamap MF_00163 Peptide deformylase [def]. 2 172 25.818 T 19-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APA12_RS11845 3e64217a0141befb339b2dbe63e7c0fd 1105 Gene3D G3DSA:1.10.287.130 650 720 1.4E-13 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS11845 3e64217a0141befb339b2dbe63e7c0fd 1105 SMART SM00387 770 879 6.0E-36 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS11845 3e64217a0141befb339b2dbe63e7c0fd 1105 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 771 877 2.8E-24 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS11845 3e64217a0141befb339b2dbe63e7c0fd 1105 SMART SM00388 658 724 2.1E-18 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS11845 3e64217a0141befb339b2dbe63e7c0fd 1105 Pfam PF00512 His Kinase A (phospho-acceptor) domain 658 724 1.1E-14 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS11845 3e64217a0141befb339b2dbe63e7c0fd 1105 SUPERFAMILY SSF52172 899 1028 3.56E-28 T 19-04-2016 IPR011006 CheY-like superfamily APA12_RS11845 3e64217a0141befb339b2dbe63e7c0fd 1105 Gene3D G3DSA:3.40.50.2300 898 1017 1.2E-26 T 19-04-2016 APA12_RS11845 3e64217a0141befb339b2dbe63e7c0fd 1105 SUPERFAMILY SSF55874 714 875 3.54E-44 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS11845 3e64217a0141befb339b2dbe63e7c0fd 1105 PANTHER PTHR24423 7 15 7.8E-107 T 19-04-2016 APA12_RS11845 3e64217a0141befb339b2dbe63e7c0fd 1105 PANTHER PTHR24423 637 1050 7.8E-107 T 19-04-2016 APA12_RS11845 3e64217a0141befb339b2dbe63e7c0fd 1105 PRINTS PR00344 Bacterial sensor protein C-terminal signature 806 820 4.0E-13 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS11845 3e64217a0141befb339b2dbe63e7c0fd 1105 PRINTS PR00344 Bacterial sensor protein C-terminal signature 824 834 4.0E-13 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS11845 3e64217a0141befb339b2dbe63e7c0fd 1105 PRINTS PR00344 Bacterial sensor protein C-terminal signature 863 876 4.0E-13 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS11845 3e64217a0141befb339b2dbe63e7c0fd 1105 PRINTS PR00344 Bacterial sensor protein C-terminal signature 839 857 4.0E-13 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS11845 3e64217a0141befb339b2dbe63e7c0fd 1105 Gene3D G3DSA:3.30.565.10 725 878 1.8E-44 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS11845 3e64217a0141befb339b2dbe63e7c0fd 1105 SUPERFAMILY SSF47384 642 725 2.35E-19 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS11845 3e64217a0141befb339b2dbe63e7c0fd 1105 Pfam PF00072 Response regulator receiver domain 903 1012 2.8E-19 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS11845 3e64217a0141befb339b2dbe63e7c0fd 1105 SMART SM00448 900 1012 7.8E-17 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS03345 d78dc19036b9d4b6035b42f8c16edc53 130 ProSitePatterns PS00934 Glyoxalase I signature 1. 6 26 - T 19-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 APA12_RS03345 d78dc19036b9d4b6035b42f8c16edc53 130 Gene3D G3DSA:3.10.180.10 3 128 1.6E-36 T 19-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APA12_RS03345 d78dc19036b9d4b6035b42f8c16edc53 130 SUPERFAMILY SSF54593 3 128 2.34E-30 T 19-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APA12_RS03345 d78dc19036b9d4b6035b42f8c16edc53 130 ProSitePatterns PS00935 Glyoxalase I signature 2. 71 83 - T 19-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 APA12_RS03345 d78dc19036b9d4b6035b42f8c16edc53 130 PANTHER PTHR10374 1 129 2.2E-43 T 19-04-2016 APA12_RS03345 d78dc19036b9d4b6035b42f8c16edc53 130 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 3 129 7.5E-52 T 19-04-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 APA12_RS03345 d78dc19036b9d4b6035b42f8c16edc53 130 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 125 6.4E-17 T 19-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APA12_RS04740 7fc1ad8d8f7a8a0d8f569acec19d9c56 138 PRINTS PR00060 Ribosomal protein L16 signature 88 117 4.9E-40 T 19-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APA12_RS04740 7fc1ad8d8f7a8a0d8f569acec19d9c56 138 PRINTS PR00060 Ribosomal protein L16 signature 24 36 4.9E-40 T 19-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APA12_RS04740 7fc1ad8d8f7a8a0d8f569acec19d9c56 138 PRINTS PR00060 Ribosomal protein L16 signature 58 87 4.9E-40 T 19-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APA12_RS04740 7fc1ad8d8f7a8a0d8f569acec19d9c56 138 PRINTS PR00060 Ribosomal protein L16 signature 42 53 4.9E-40 T 19-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APA12_RS04740 7fc1ad8d8f7a8a0d8f569acec19d9c56 138 SUPERFAMILY SSF54686 1 134 2.35E-55 T 19-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 APA12_RS04740 7fc1ad8d8f7a8a0d8f569acec19d9c56 138 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 6.6E-48 T 19-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 APA12_RS04740 7fc1ad8d8f7a8a0d8f569acec19d9c56 138 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 39.147 T 19-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APA12_RS04740 7fc1ad8d8f7a8a0d8f569acec19d9c56 138 Gene3D G3DSA:3.90.1170.10 23 134 8.6E-52 T 19-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 APA12_RS04740 7fc1ad8d8f7a8a0d8f569acec19d9c56 138 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 19-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04740 7fc1ad8d8f7a8a0d8f569acec19d9c56 138 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 2.3E-57 T 19-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APA12_RS04740 7fc1ad8d8f7a8a0d8f569acec19d9c56 138 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 19-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04740 7fc1ad8d8f7a8a0d8f569acec19d9c56 138 PANTHER PTHR12220 1 134 9.7E-71 T 19-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APA12_RS00295 74cb623e1ba19b8279a07ad012ce0c00 217 Gene3D G3DSA:3.40.50.300 6 209 7.8E-56 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS00295 74cb623e1ba19b8279a07ad012ce0c00 217 Pfam PF02224 Cytidylate kinase 8 209 9.8E-50 T 19-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 APA12_RS00295 74cb623e1ba19b8279a07ad012ce0c00 217 SUPERFAMILY SSF52540 5 212 1.19E-33 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS00295 74cb623e1ba19b8279a07ad012ce0c00 217 PANTHER PTHR21299 6 215 6.4E-38 T 19-04-2016 APA12_RS00295 74cb623e1ba19b8279a07ad012ce0c00 217 Hamap MF_00238 Cytidylate kinase [cmk]. 6 212 28.888 T 19-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 APA12_RS00295 74cb623e1ba19b8279a07ad012ce0c00 217 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 206 3.4E-47 T 19-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 APA12_RS12305 25e7a877772414cb604a952d8edc70a9 972 PANTHER PTHR11773 30 972 0.0 T 19-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 APA12_RS12305 25e7a877772414cb604a952d8edc70a9 972 SUPERFAMILY SSF53383 479 900 1.1E-101 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APA12_RS12305 25e7a877772414cb604a952d8edc70a9 972 SUPERFAMILY SSF53383 943 965 1.1E-101 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APA12_RS12305 25e7a877772414cb604a952d8edc70a9 972 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 35 964 0.0 T 19-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 APA12_RS12305 25e7a877772414cb604a952d8edc70a9 972 Pfam PF02347 Glycine cleavage system P-protein 479 752 2.0E-8 T 19-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 APA12_RS12305 25e7a877772414cb604a952d8edc70a9 972 Pfam PF02347 Glycine cleavage system P-protein 35 458 1.0E-178 T 19-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 APA12_RS12305 25e7a877772414cb604a952d8edc70a9 972 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 26 970 25.399 T 19-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 APA12_RS12305 25e7a877772414cb604a952d8edc70a9 972 PANTHER PTHR11773:SF1 30 972 0.0 T 19-04-2016 APA12_RS12305 25e7a877772414cb604a952d8edc70a9 972 SUPERFAMILY SSF53383 35 456 4.68E-104 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APA12_RS12305 25e7a877772414cb604a952d8edc70a9 972 Gene3D G3DSA:3.40.640.10 105 323 2.0E-11 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APA12_RS12305 25e7a877772414cb604a952d8edc70a9 972 Gene3D G3DSA:3.40.640.10 520 754 1.4E-40 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APA12_RS03725 21ddf39a660a6ac7f136eb45e4a64b1a 171 PANTHER PTHR33695:SF1 15 159 1.9E-37 T 19-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APA12_RS03725 21ddf39a660a6ac7f136eb45e4a64b1a 171 PANTHER PTHR33695 15 159 1.9E-37 T 19-04-2016 APA12_RS03725 21ddf39a660a6ac7f136eb45e4a64b1a 171 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 57 65 4.0E-11 T 19-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APA12_RS03725 21ddf39a660a6ac7f136eb45e4a64b1a 171 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 139 155 4.0E-11 T 19-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APA12_RS03725 21ddf39a660a6ac7f136eb45e4a64b1a 171 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 103 118 4.0E-11 T 19-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APA12_RS03725 21ddf39a660a6ac7f136eb45e4a64b1a 171 Pfam PF01252 Signal peptidase (SPase) II 18 157 1.6E-33 T 19-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APA12_RS03725 21ddf39a660a6ac7f136eb45e4a64b1a 171 TIGRFAM TIGR00077 lspA: signal peptidase II 16 163 8.8E-30 T 19-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APA12_RS03725 21ddf39a660a6ac7f136eb45e4a64b1a 171 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 9 164 13.558 T 19-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APA12_RS12655 17679d45967293468153aac4a9340ee3 550 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 385 549 1.8E-56 T 19-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 APA12_RS12655 17679d45967293468153aac4a9340ee3 550 PIRSF PIRSF001394 37 550 2.5E-207 T 19-04-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 APA12_RS12655 17679d45967293468153aac4a9340ee3 550 Pfam PF05683 Fumarase C-terminus 344 549 1.5E-90 T 19-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 APA12_RS12655 17679d45967293468153aac4a9340ee3 550 Gene3D G3DSA:3.20.130.10 362 548 4.8E-72 T 19-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 APA12_RS12655 17679d45967293468153aac4a9340ee3 550 PANTHER PTHR30389 9 550 0.0 T 19-04-2016 APA12_RS12655 17679d45967293468153aac4a9340ee3 550 PANTHER PTHR30389:SF0 9 550 0.0 T 19-04-2016 APA12_RS12655 17679d45967293468153aac4a9340ee3 550 Pfam PF05681 Fumarate hydratase (Fumerase) 56 338 3.4E-84 T 19-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 APA12_RS12655 17679d45967293468153aac4a9340ee3 550 SUPERFAMILY SSF117457 373 547 3.4E-60 T 19-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 APA12_RS13135 1f7143ddb63f658de38b99bf58e48d1a 190 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 176 4.5E-70 T 19-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 APA12_RS13135 1f7143ddb63f658de38b99bf58e48d1a 190 SUPERFAMILY SSF51182 1 184 3.06E-74 T 19-04-2016 IPR011051 RmlC-like cupin domain APA12_RS13135 1f7143ddb63f658de38b99bf58e48d1a 190 Gene3D G3DSA:2.60.120.10 1 184 1.2E-76 T 19-04-2016 IPR014710 RmlC-like jelly roll fold APA12_RS13135 1f7143ddb63f658de38b99bf58e48d1a 190 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 180 4.0E-97 T 19-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 APA12_RS13135 1f7143ddb63f658de38b99bf58e48d1a 190 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 5 176 1.0E-67 T 19-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 APA12_RS13135 1f7143ddb63f658de38b99bf58e48d1a 190 PANTHER PTHR21047 1 185 3.5E-71 T 19-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 APA12_RS04730 36d02f6b1df0b4564c5ece1d99dae84a 136 PANTHER PTHR13501 8 135 9.6E-36 T 19-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 APA12_RS04730 36d02f6b1df0b4564c5ece1d99dae84a 136 Gene3D G3DSA:3.90.470.10 14 122 2.8E-36 T 19-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 APA12_RS04730 36d02f6b1df0b4564c5ece1d99dae84a 136 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 17 119 1.8E-28 T 19-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 APA12_RS04730 36d02f6b1df0b4564c5ece1d99dae84a 136 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 13 122 24.412 T 19-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 APA12_RS04730 36d02f6b1df0b4564c5ece1d99dae84a 136 Pfam PF00237 Ribosomal protein L22p/L17e 20 119 8.5E-26 T 19-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 APA12_RS04730 36d02f6b1df0b4564c5ece1d99dae84a 136 ProSitePatterns PS00464 Ribosomal protein L22 signature. 95 119 - T 19-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04730 36d02f6b1df0b4564c5ece1d99dae84a 136 SUPERFAMILY SSF54843 10 122 8.11E-37 T 19-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 APA12_RS12075 dae149205e908a2487f4ee2f7527c853 160 Pfam PF01799 [2Fe-2S] binding domain 76 147 1.5E-22 T 19-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 APA12_RS12075 dae149205e908a2487f4ee2f7527c853 160 Gene3D G3DSA:1.10.150.120 78 156 2.0E-25 T 19-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 APA12_RS12075 dae149205e908a2487f4ee2f7527c853 160 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 57 1.3E-5 T 19-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APA12_RS12075 dae149205e908a2487f4ee2f7527c853 160 SUPERFAMILY SSF54292 6 83 2.62E-18 T 19-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APA12_RS12075 dae149205e908a2487f4ee2f7527c853 160 SUPERFAMILY SSF47741 76 154 4.19E-25 T 19-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 APA12_RS12075 dae149205e908a2487f4ee2f7527c853 160 PANTHER PTHR11908:SF66 1 137 5.8E-26 T 19-04-2016 APA12_RS12075 dae149205e908a2487f4ee2f7527c853 160 Gene3D G3DSA:3.10.20.30 4 77 3.6E-22 T 19-04-2016 IPR012675 Beta-grasp domain APA12_RS12075 dae149205e908a2487f4ee2f7527c853 160 PANTHER PTHR11908 1 137 5.8E-26 T 19-04-2016 APA12_RS12075 dae149205e908a2487f4ee2f7527c853 160 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 41 49 - T 19-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 APA12_RS05990 76a067334e992d36345ace3e21c9a6a4 296 PANTHER PTHR12128 1 296 5.6E-134 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APA12_RS05990 76a067334e992d36345ace3e21c9a6a4 296 SMART SM01130 5 293 1.8E-146 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APA12_RS05990 76a067334e992d36345ace3e21c9a6a4 296 PIRSF PIRSF001365 1 296 2.4E-98 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APA12_RS05990 76a067334e992d36345ace3e21c9a6a4 296 SUPERFAMILY SSF51569 6 293 5.13E-108 T 19-04-2016 APA12_RS05990 76a067334e992d36345ace3e21c9a6a4 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 39 60 5.8E-33 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APA12_RS05990 76a067334e992d36345ace3e21c9a6a4 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 107 123 5.8E-33 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APA12_RS05990 76a067334e992d36345ace3e21c9a6a4 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 75 93 5.8E-33 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APA12_RS05990 76a067334e992d36345ace3e21c9a6a4 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 132 149 5.8E-33 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APA12_RS05990 76a067334e992d36345ace3e21c9a6a4 296 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 8 289 4.9E-104 T 19-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APA12_RS05990 76a067334e992d36345ace3e21c9a6a4 296 Gene3D G3DSA:3.20.20.70 5 295 9.6E-122 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS05990 76a067334e992d36345ace3e21c9a6a4 296 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 5 291 65.086 T 19-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APA12_RS05990 76a067334e992d36345ace3e21c9a6a4 296 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 137 167 - T 19-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APA12_RS05990 76a067334e992d36345ace3e21c9a6a4 296 Pfam PF00701 Dihydrodipicolinate synthetase family 6 289 7.0E-98 T 19-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APA12_RS05990 76a067334e992d36345ace3e21c9a6a4 296 PANTHER PTHR12128:SF34 1 296 5.6E-134 T 19-04-2016 APA12_RS04505 2feabae5818245501af25389753821b9 124 Pfam PF06078 Bacterial protein of unknown function (DUF937) 7 111 4.8E-9 T 19-04-2016 IPR009282 Protein of unknown function DUF937 APA12_RS04505 2feabae5818245501af25389753821b9 124 Gene3D G3DSA:1.10.10.690 5 120 6.3E-33 T 19-04-2016 IPR027405 YidB-like APA12_RS04505 2feabae5818245501af25389753821b9 124 SUPERFAMILY SSF140804 9 118 5.62E-27 T 19-04-2016 IPR027405 YidB-like APA12_RS00080 eca33d07b01ae515696eeefcf29a3231 209 Gene3D G3DSA:3.40.109.10 15 205 9.1E-35 T 19-04-2016 IPR000415 Nitroreductase-like GO:0016491 APA12_RS00080 eca33d07b01ae515696eeefcf29a3231 209 PANTHER PTHR23026 1 204 2.2E-66 T 19-04-2016 APA12_RS00080 eca33d07b01ae515696eeefcf29a3231 209 PANTHER PTHR23026:SF110 1 204 2.2E-66 T 19-04-2016 APA12_RS00080 eca33d07b01ae515696eeefcf29a3231 209 Pfam PF00881 Nitroreductase family 37 186 1.8E-9 T 19-04-2016 IPR029479 Nitroreductase APA12_RS00080 eca33d07b01ae515696eeefcf29a3231 209 SUPERFAMILY SSF55469 25 205 2.09E-36 T 19-04-2016 IPR000415 Nitroreductase-like GO:0016491 APA12_RS00715 7b8d3b47630bf7519dbd2ad2849a354b 1051 SUPERFAMILY SSF82693 565 669 7.32E-27 T 19-04-2016 APA12_RS00715 7b8d3b47630bf7519dbd2ad2849a354b 1051 SUPERFAMILY SSF82866 831 1026 1.7E-41 T 19-04-2016 APA12_RS00715 7b8d3b47630bf7519dbd2ad2849a354b 1051 Gene3D G3DSA:3.30.70.1430 40 141 2.6E-30 T 19-04-2016 APA12_RS00715 7b8d3b47630bf7519dbd2ad2849a354b 1051 SUPERFAMILY SSF82693 137 184 3.49E-21 T 19-04-2016 APA12_RS00715 7b8d3b47630bf7519dbd2ad2849a354b 1051 SUPERFAMILY SSF82693 276 331 3.49E-21 T 19-04-2016 APA12_RS00715 7b8d3b47630bf7519dbd2ad2849a354b 1051 Gene3D G3DSA:3.30.2090.10 723 808 5.4E-23 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APA12_RS00715 7b8d3b47630bf7519dbd2ad2849a354b 1051 SUPERFAMILY SSF82714 184 274 1.12E-20 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APA12_RS00715 7b8d3b47630bf7519dbd2ad2849a354b 1051 Gene3D G3DSA:3.30.2090.10 183 276 2.0E-23 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APA12_RS00715 7b8d3b47630bf7519dbd2ad2849a354b 1051 PANTHER PTHR32063:SF13 1 1051 0.0 T 19-04-2016 APA12_RS00715 7b8d3b47630bf7519dbd2ad2849a354b 1051 Gene3D G3DSA:3.30.70.1430 567 669 8.8E-31 T 19-04-2016 APA12_RS00715 7b8d3b47630bf7519dbd2ad2849a354b 1051 SUPERFAMILY SSF82693 40 129 2.51E-22 T 19-04-2016 APA12_RS00715 7b8d3b47630bf7519dbd2ad2849a354b 1051 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 1.2E-102 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS00715 7b8d3b47630bf7519dbd2ad2849a354b 1051 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 1.2E-102 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS00715 7b8d3b47630bf7519dbd2ad2849a354b 1051 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 1.2E-102 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS00715 7b8d3b47630bf7519dbd2ad2849a354b 1051 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 1.2E-102 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS00715 7b8d3b47630bf7519dbd2ad2849a354b 1051 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.2E-102 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS00715 7b8d3b47630bf7519dbd2ad2849a354b 1051 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.2E-102 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS00715 7b8d3b47630bf7519dbd2ad2849a354b 1051 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 1.2E-102 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS00715 7b8d3b47630bf7519dbd2ad2849a354b 1051 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 1.2E-102 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS00715 7b8d3b47630bf7519dbd2ad2849a354b 1051 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 1.2E-102 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS00715 7b8d3b47630bf7519dbd2ad2849a354b 1051 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1038 0.0 T 19-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 APA12_RS00715 7b8d3b47630bf7519dbd2ad2849a354b 1051 SUPERFAMILY SSF82714 723 806 3.27E-19 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APA12_RS00715 7b8d3b47630bf7519dbd2ad2849a354b 1051 Gene3D G3DSA:1.10.3850.10 815 1027 1.9E-52 T 19-04-2016 APA12_RS00715 7b8d3b47630bf7519dbd2ad2849a354b 1051 Gene3D G3DSA:1.20.1640.10 295 506 3.0E-51 T 19-04-2016 APA12_RS00715 7b8d3b47630bf7519dbd2ad2849a354b 1051 SUPERFAMILY SSF82693 672 721 3.66E-24 T 19-04-2016 APA12_RS00715 7b8d3b47630bf7519dbd2ad2849a354b 1051 SUPERFAMILY SSF82866 298 499 3.92E-43 T 19-04-2016 APA12_RS00715 7b8d3b47630bf7519dbd2ad2849a354b 1051 PANTHER PTHR32063 1 1051 0.0 T 19-04-2016 APA12_RS00715 7b8d3b47630bf7519dbd2ad2849a354b 1051 Pfam PF00873 AcrB/AcrD/AcrF family 4 1025 0.0 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS00715 7b8d3b47630bf7519dbd2ad2849a354b 1051 SUPERFAMILY SSF82693 808 856 3.66E-24 T 19-04-2016 APA12_RS06855 70d774ccce23bb4a74eef862a9650df3 203 Pfam PF13586 Transposase DDE domain 118 202 8.8E-16 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS06855 70d774ccce23bb4a74eef862a9650df3 203 PANTHER PTHR30007:SF22 57 201 5.5E-28 T 19-04-2016 APA12_RS06855 70d774ccce23bb4a74eef862a9650df3 203 PANTHER PTHR30007 57 201 5.5E-28 T 19-04-2016 APA12_RS10905 70d774ccce23bb4a74eef862a9650df3 203 Pfam PF13586 Transposase DDE domain 118 202 8.8E-16 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS10905 70d774ccce23bb4a74eef862a9650df3 203 PANTHER PTHR30007:SF22 57 201 5.5E-28 T 19-04-2016 APA12_RS10905 70d774ccce23bb4a74eef862a9650df3 203 PANTHER PTHR30007 57 201 5.5E-28 T 19-04-2016 APA12_RS07810 70d774ccce23bb4a74eef862a9650df3 203 Pfam PF13586 Transposase DDE domain 118 202 8.8E-16 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS07810 70d774ccce23bb4a74eef862a9650df3 203 PANTHER PTHR30007:SF22 57 201 5.5E-28 T 19-04-2016 APA12_RS07810 70d774ccce23bb4a74eef862a9650df3 203 PANTHER PTHR30007 57 201 5.5E-28 T 19-04-2016 APA12_RS13525 70d774ccce23bb4a74eef862a9650df3 203 Pfam PF13586 Transposase DDE domain 118 202 8.8E-16 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS13525 70d774ccce23bb4a74eef862a9650df3 203 PANTHER PTHR30007:SF22 57 201 5.5E-28 T 19-04-2016 APA12_RS13525 70d774ccce23bb4a74eef862a9650df3 203 PANTHER PTHR30007 57 201 5.5E-28 T 19-04-2016 APA12_RS00735 70d774ccce23bb4a74eef862a9650df3 203 Pfam PF13586 Transposase DDE domain 118 202 8.8E-16 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS00735 70d774ccce23bb4a74eef862a9650df3 203 PANTHER PTHR30007:SF22 57 201 5.5E-28 T 19-04-2016 APA12_RS00735 70d774ccce23bb4a74eef862a9650df3 203 PANTHER PTHR30007 57 201 5.5E-28 T 19-04-2016 APA12_RS12045 70d774ccce23bb4a74eef862a9650df3 203 Pfam PF13586 Transposase DDE domain 118 202 8.8E-16 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS12045 70d774ccce23bb4a74eef862a9650df3 203 PANTHER PTHR30007:SF22 57 201 5.5E-28 T 19-04-2016 APA12_RS12045 70d774ccce23bb4a74eef862a9650df3 203 PANTHER PTHR30007 57 201 5.5E-28 T 19-04-2016 APA12_RS01360 70d774ccce23bb4a74eef862a9650df3 203 Pfam PF13586 Transposase DDE domain 118 202 8.8E-16 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS01360 70d774ccce23bb4a74eef862a9650df3 203 PANTHER PTHR30007:SF22 57 201 5.5E-28 T 19-04-2016 APA12_RS01360 70d774ccce23bb4a74eef862a9650df3 203 PANTHER PTHR30007 57 201 5.5E-28 T 19-04-2016 APA12_RS10320 9a739f1d95bc3df182c03e240f60a27f 337 SMART SM00479 126 292 8.2E-9 T 19-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APA12_RS10320 9a739f1d95bc3df182c03e240f60a27f 337 Gene3D G3DSA:3.30.420.10 125 290 1.9E-29 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS10320 9a739f1d95bc3df182c03e240f60a27f 337 PANTHER PTHR30231 90 279 7.6E-22 T 19-04-2016 APA12_RS10320 9a739f1d95bc3df182c03e240f60a27f 337 SUPERFAMILY SSF53098 127 296 2.32E-29 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS10320 9a739f1d95bc3df182c03e240f60a27f 337 Pfam PF00929 Exonuclease 129 282 8.4E-13 T 19-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APA12_RS09850 218c9e2fbc6e145e4d8117071ca08610 734 Gene3D G3DSA:3.30.1360.40 237 333 8.5E-30 T 19-04-2016 IPR024946 Arginine repressor C-terminal-like domain APA12_RS09850 218c9e2fbc6e145e4d8117071ca08610 734 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 604 638 7.7 T 19-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APA12_RS09850 218c9e2fbc6e145e4d8117071ca08610 734 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 550 597 0.051 T 19-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APA12_RS09850 218c9e2fbc6e145e4d8117071ca08610 734 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 648 686 0.005 T 19-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APA12_RS09850 218c9e2fbc6e145e4d8117071ca08610 734 Gene3D G3DSA:3.90.199.10 335 400 3.1E-108 T 19-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 APA12_RS09850 218c9e2fbc6e145e4d8117071ca08610 734 Gene3D G3DSA:3.90.199.10 31 236 3.1E-108 T 19-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 APA12_RS09850 218c9e2fbc6e145e4d8117071ca08610 734 Gene3D G3DSA:2.120.10.90 504 685 2.3E-28 T 19-04-2016 APA12_RS09850 218c9e2fbc6e145e4d8117071ca08610 734 SUPERFAMILY SSF56719 31 481 2.62E-154 T 19-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 APA12_RS09850 218c9e2fbc6e145e4d8117071ca08610 734 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 464 1.2E-138 T 19-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS09850 218c9e2fbc6e145e4d8117071ca08610 734 SMART SM00434 11 463 2.1E-226 T 19-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APA12_RS09850 218c9e2fbc6e145e4d8117071ca08610 734 PANTHER PTHR10169 2 599 6.9E-202 T 19-04-2016 APA12_RS09850 218c9e2fbc6e145e4d8117071ca08610 734 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 4 734 31.749 T 19-04-2016 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APA12_RS09850 218c9e2fbc6e145e4d8117071ca08610 734 SUPERFAMILY SSF101904 504 732 3.14E-46 T 19-04-2016 APA12_RS09850 218c9e2fbc6e145e4d8117071ca08610 734 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 8 726 1.7E-252 T 19-04-2016 APA12_RS09850 218c9e2fbc6e145e4d8117071ca08610 734 PANTHER PTHR10169:SF48 2 599 6.9E-202 T 19-04-2016 APA12_RS01160 74a592d4a9c84186a267042be1571ed4 181 Pfam PF02470 MlaD protein 48 125 1.6E-17 T 19-04-2016 IPR003399 Mce/MlaD APA12_RS01160 74a592d4a9c84186a267042be1571ed4 181 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 14 156 2.5E-42 T 19-04-2016 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 APA12_RS01160 74a592d4a9c84186a267042be1571ed4 181 PANTHER PTHR33371 8 155 1.1E-25 T 19-04-2016 APA12_RS02875 cbd1c3939af805b08ca7d10ac390438c 419 Pfam PF05161 MOFRL family 308 412 2.3E-34 T 19-04-2016 IPR007835 MOFRL domain APA12_RS02875 cbd1c3939af805b08ca7d10ac390438c 419 Gene3D G3DSA:3.40.1480.10 242 419 1.1E-67 T 19-04-2016 IPR007835 MOFRL domain APA12_RS02875 cbd1c3939af805b08ca7d10ac390438c 419 Gene3D G3DSA:3.40.50.10180 9 241 3.5E-86 T 19-04-2016 APA12_RS02875 cbd1c3939af805b08ca7d10ac390438c 419 PANTHER PTHR12227:SF0 6 419 6.9E-117 T 19-04-2016 APA12_RS02875 cbd1c3939af805b08ca7d10ac390438c 419 PANTHER PTHR12227 6 419 6.9E-117 T 19-04-2016 APA12_RS02875 cbd1c3939af805b08ca7d10ac390438c 419 SUPERFAMILY SSF82544 4 418 7.19E-140 T 19-04-2016 APA12_RS02875 cbd1c3939af805b08ca7d10ac390438c 419 Pfam PF13660 Domain of unknown function (DUF4147) 9 229 1.8E-70 T 19-04-2016 IPR025286 MOFRL-associated domain APA12_RS01055 47b8fb0cc193f657f6f875ab30c2c9a9 272 PANTHER PTHR30096 10 272 4.8E-99 T 19-04-2016 APA12_RS01055 47b8fb0cc193f657f6f875ab30c2c9a9 272 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 42 253 5.7E-39 T 19-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 APA12_RS01055 47b8fb0cc193f657f6f875ab30c2c9a9 272 PANTHER PTHR30096:SF0 10 272 4.8E-99 T 19-04-2016 APA12_RS01055 47b8fb0cc193f657f6f875ab30c2c9a9 272 PIRSF PIRSF006157 8 272 5.4E-89 T 19-04-2016 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type GO:0008270|GO:0016701|GO:0055114 APA12_RS01055 47b8fb0cc193f657f6f875ab30c2c9a9 272 SUPERFAMILY SSF53213 11 267 6.41E-86 T 19-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 APA12_RS01055 47b8fb0cc193f657f6f875ab30c2c9a9 272 Gene3D G3DSA:3.40.830.10 9 261 9.6E-97 T 19-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 APA12_RS07865 558febe8f41f3f997c6aeafa43925157 540 SUPERFAMILY SSF52540 303 530 2.97E-47 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS07865 558febe8f41f3f997c6aeafa43925157 540 Pfam PF00005 ABC transporter 340 471 1.8E-19 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS07865 558febe8f41f3f997c6aeafa43925157 540 Pfam PF00005 ABC transporter 20 190 1.1E-24 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS07865 558febe8f41f3f997c6aeafa43925157 540 SUPERFAMILY SSF52540 131 257 1.37E-45 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS07865 558febe8f41f3f997c6aeafa43925157 540 SUPERFAMILY SSF52540 2 92 1.37E-45 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS07865 558febe8f41f3f997c6aeafa43925157 540 Pfam PF12848 ABC transporter 229 311 3.2E-25 T 19-04-2016 IPR032781 ABC-transporter extension domain APA12_RS07865 558febe8f41f3f997c6aeafa43925157 540 PANTHER PTHR19211 1 535 0.0 T 19-04-2016 APA12_RS07865 558febe8f41f3f997c6aeafa43925157 540 Gene3D G3DSA:3.40.50.300 1 88 2.4E-48 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS07865 558febe8f41f3f997c6aeafa43925157 540 Gene3D G3DSA:3.40.50.300 123 277 2.4E-48 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS07865 558febe8f41f3f997c6aeafa43925157 540 Gene3D G3DSA:3.40.50.300 323 531 6.4E-43 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS07865 558febe8f41f3f997c6aeafa43925157 540 SMART SM00382 26 235 5.3E-13 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS07865 558febe8f41f3f997c6aeafa43925157 540 SMART SM00382 349 516 1.5E-10 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS07865 558febe8f41f3f997c6aeafa43925157 540 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APA12_RS07865 558febe8f41f3f997c6aeafa43925157 540 ProSitePatterns PS00211 ABC transporters family signature. 443 457 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APA12_RS07865 558febe8f41f3f997c6aeafa43925157 540 PANTHER PTHR19211:SF51 1 535 0.0 T 19-04-2016 APA12_RS12725 c84aae2b79e0ef81bce9a55e22b1701b 304 SUPERFAMILY SSF53850 90 296 4.34E-42 T 19-04-2016 APA12_RS12725 c84aae2b79e0ef81bce9a55e22b1701b 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.3E-17 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS12725 c84aae2b79e0ef81bce9a55e22b1701b 304 Pfam PF03466 LysR substrate binding domain 88 290 8.1E-43 T 19-04-2016 IPR005119 LysR, substrate-binding APA12_RS12725 c84aae2b79e0ef81bce9a55e22b1701b 304 SUPERFAMILY SSF46785 5 85 3.31E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS12725 c84aae2b79e0ef81bce9a55e22b1701b 304 PANTHER PTHR30537:SF5 1 289 2.5E-85 T 19-04-2016 APA12_RS12725 c84aae2b79e0ef81bce9a55e22b1701b 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.4E-5 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS12725 c84aae2b79e0ef81bce9a55e22b1701b 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-5 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS12725 c84aae2b79e0ef81bce9a55e22b1701b 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.4E-5 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS12725 c84aae2b79e0ef81bce9a55e22b1701b 304 PANTHER PTHR30537 1 289 2.5E-85 T 19-04-2016 APA12_RS12725 c84aae2b79e0ef81bce9a55e22b1701b 304 Gene3D G3DSA:1.10.10.10 4 80 1.8E-23 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS12725 c84aae2b79e0ef81bce9a55e22b1701b 304 Gene3D G3DSA:3.40.190.10 93 173 1.2E-15 T 19-04-2016 APA12_RS12725 c84aae2b79e0ef81bce9a55e22b1701b 304 Gene3D G3DSA:3.40.190.10 174 259 5.6E-24 T 19-04-2016 APA12_RS01810 99d8b8257cd842cb055f7a6cc8d4f39b 388 Pfam PF00285 Citrate synthase, C-terminal domain 15 363 1.2E-114 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 APA12_RS01810 99d8b8257cd842cb055f7a6cc8d4f39b 388 SUPERFAMILY SSF48256 15 375 1.96E-121 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 APA12_RS01810 99d8b8257cd842cb055f7a6cc8d4f39b 388 PANTHER PTHR11739:SF4 15 386 2.6E-151 T 19-04-2016 APA12_RS01810 99d8b8257cd842cb055f7a6cc8d4f39b 388 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 14 381 5.2E-153 T 19-04-2016 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 APA12_RS01810 99d8b8257cd842cb055f7a6cc8d4f39b 388 Gene3D G3DSA:1.10.580.10 20 243 1.3E-75 T 19-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 APA12_RS01810 99d8b8257cd842cb055f7a6cc8d4f39b 388 ProSitePatterns PS00480 Citrate synthase signature. 264 276 - T 19-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 APA12_RS01810 99d8b8257cd842cb055f7a6cc8d4f39b 388 Gene3D G3DSA:1.10.230.10 244 328 1.4E-27 T 19-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain APA12_RS01810 99d8b8257cd842cb055f7a6cc8d4f39b 388 PRINTS PR00143 Citrate synthase signature 314 330 2.34E-37 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 APA12_RS01810 99d8b8257cd842cb055f7a6cc8d4f39b 388 PRINTS PR00143 Citrate synthase signature 334 348 2.34E-37 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 APA12_RS01810 99d8b8257cd842cb055f7a6cc8d4f39b 388 PRINTS PR00143 Citrate synthase signature 182 197 2.34E-37 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 APA12_RS01810 99d8b8257cd842cb055f7a6cc8d4f39b 388 PRINTS PR00143 Citrate synthase signature 132 145 2.34E-37 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 APA12_RS01810 99d8b8257cd842cb055f7a6cc8d4f39b 388 PRINTS PR00143 Citrate synthase signature 257 277 2.34E-37 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 APA12_RS01810 99d8b8257cd842cb055f7a6cc8d4f39b 388 PRINTS PR00143 Citrate synthase signature 204 232 2.34E-37 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 APA12_RS01810 99d8b8257cd842cb055f7a6cc8d4f39b 388 PIRSF PIRSF001369 8 382 1.3E-110 T 19-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 APA12_RS01810 99d8b8257cd842cb055f7a6cc8d4f39b 388 PANTHER PTHR11739 15 386 2.6E-151 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 APA12_RS04005 b59bca282625b9880e7ff7aaeb349f09 273 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 1 262 37.203 T 19-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 APA12_RS04005 b59bca282625b9880e7ff7aaeb349f09 273 Gene3D G3DSA:3.40.50.150 1 265 1.6E-91 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS04005 b59bca282625b9880e7ff7aaeb349f09 273 PANTHER PTHR37426 1 261 3.3E-88 T 19-04-2016 APA12_RS04005 b59bca282625b9880e7ff7aaeb349f09 273 PANTHER PTHR37426:SF1 1 261 3.3E-88 T 19-04-2016 APA12_RS04005 b59bca282625b9880e7ff7aaeb349f09 273 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 34 264 1.5E-70 T 19-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 APA12_RS04005 b59bca282625b9880e7ff7aaeb349f09 273 SUPERFAMILY SSF53335 8 264 6.2E-79 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS03215 9ceff276d21edeb58925295e9b716110 601 TIGRFAM TIGR01393 lepA: elongation factor 4 9 600 6.7E-291 T 19-04-2016 IPR006297 Elongation factor 4 GO:0005525 APA12_RS03215 9ceff276d21edeb58925295e9b716110 601 Pfam PF00679 Elongation factor G C-terminus 404 487 2.3E-21 T 19-04-2016 IPR000640 Translation elongation factor EFG, V domain APA12_RS03215 9ceff276d21edeb58925295e9b716110 601 SUPERFAMILY SSF54980 404 498 4.32E-26 T 19-04-2016 IPR009022 Elongation factor G, III-V domain APA12_RS03215 9ceff276d21edeb58925295e9b716110 601 Pfam PF06421 GTP-binding protein LepA C-terminus 492 598 1.7E-49 T 19-04-2016 IPR013842 GTP-binding protein LepA, C-terminal APA12_RS03215 9ceff276d21edeb58925295e9b716110 601 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 47 62 - T 19-04-2016 IPR031157 Tr-type G domain, conserved site APA12_RS03215 9ceff276d21edeb58925295e9b716110 601 Gene3D G3DSA:2.40.30.10 198 294 7.2E-24 T 19-04-2016 APA12_RS03215 9ceff276d21edeb58925295e9b716110 601 PRINTS PR00315 GTP-binding elongation factor signature 54 62 3.1E-13 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APA12_RS03215 9ceff276d21edeb58925295e9b716110 601 PRINTS PR00315 GTP-binding elongation factor signature 95 106 3.1E-13 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APA12_RS03215 9ceff276d21edeb58925295e9b716110 601 PRINTS PR00315 GTP-binding elongation factor signature 11 24 3.1E-13 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APA12_RS03215 9ceff276d21edeb58925295e9b716110 601 PRINTS PR00315 GTP-binding elongation factor signature 131 140 3.1E-13 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APA12_RS03215 9ceff276d21edeb58925295e9b716110 601 PRINTS PR00315 GTP-binding elongation factor signature 79 89 3.1E-13 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APA12_RS03215 9ceff276d21edeb58925295e9b716110 601 Gene3D G3DSA:3.40.50.300 8 197 5.0E-57 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS03215 9ceff276d21edeb58925295e9b716110 601 SUPERFAMILY SSF52540 5 235 7.44E-54 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS03215 9ceff276d21edeb58925295e9b716110 601 Pfam PF03144 Elongation factor Tu domain 2 210 280 5.0E-9 T 19-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APA12_RS03215 9ceff276d21edeb58925295e9b716110 601 SMART SM00838 403 488 0.001 T 19-04-2016 IPR000640 Translation elongation factor EFG, V domain APA12_RS03215 9ceff276d21edeb58925295e9b716110 601 Gene3D G3DSA:3.30.70.870 298 374 2.4E-24 T 19-04-2016 APA12_RS03215 9ceff276d21edeb58925295e9b716110 601 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 181 6.7E-21 T 19-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APA12_RS03215 9ceff276d21edeb58925295e9b716110 601 SUPERFAMILY SSF54980 298 375 8.27E-17 T 19-04-2016 IPR009022 Elongation factor G, III-V domain APA12_RS03215 9ceff276d21edeb58925295e9b716110 601 PANTHER PTHR23115:SF175 402 600 0.0 T 19-04-2016 APA12_RS03215 9ceff276d21edeb58925295e9b716110 601 PANTHER PTHR23115:SF175 9 378 0.0 T 19-04-2016 APA12_RS03215 9ceff276d21edeb58925295e9b716110 601 PANTHER PTHR23115 402 600 0.0 T 19-04-2016 APA12_RS03215 9ceff276d21edeb58925295e9b716110 601 PANTHER PTHR23115 9 378 0.0 T 19-04-2016 APA12_RS03215 9ceff276d21edeb58925295e9b716110 601 Pfam PF00009 Elongation factor Tu GTP binding domain 9 186 1.7E-50 T 19-04-2016 APA12_RS03215 9ceff276d21edeb58925295e9b716110 601 Gene3D G3DSA:3.30.70.240 406 494 2.4E-22 T 19-04-2016 IPR000640 Translation elongation factor EFG, V domain APA12_RS03215 9ceff276d21edeb58925295e9b716110 601 Hamap MF_00071 Elongation factor 4 [lepA]. 1 601 299.596 T 19-04-2016 IPR006297 Elongation factor 4 GO:0005525 APA12_RS01510 d4df67e26a921c6a8b16471e2e69b37b 686 PANTHER PTHR30075 1 685 1.3E-225 T 19-04-2016 APA12_RS01510 d4df67e26a921c6a8b16471e2e69b37b 686 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 237 252 1.3E-23 T 19-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APA12_RS01510 d4df67e26a921c6a8b16471e2e69b37b 686 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 386 405 1.3E-23 T 19-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APA12_RS01510 d4df67e26a921c6a8b16471e2e69b37b 686 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 310 326 1.3E-23 T 19-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APA12_RS01510 d4df67e26a921c6a8b16471e2e69b37b 686 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 5 18 1.3E-23 T 19-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APA12_RS01510 d4df67e26a921c6a8b16471e2e69b37b 686 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 46 58 1.3E-23 T 19-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APA12_RS01510 d4df67e26a921c6a8b16471e2e69b37b 686 Pfam PF05746 DALR anticodon binding domain 573 676 9.4E-9 T 19-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 APA12_RS01510 d4df67e26a921c6a8b16471e2e69b37b 686 SUPERFAMILY SSF109604 335 483 1.67E-12 T 19-04-2016 APA12_RS01510 d4df67e26a921c6a8b16471e2e69b37b 686 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 684 7.0E-156 T 19-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APA12_RS01510 d4df67e26a921c6a8b16471e2e69b37b 686 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 1 684 21.764 T 19-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APA12_RS01510 d4df67e26a921c6a8b16471e2e69b37b 686 Gene3D G3DSA:1.10.730.10 575 676 6.1E-4 T 19-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS01510 d4df67e26a921c6a8b16471e2e69b37b 686 PANTHER PTHR30075:SF2 1 685 1.3E-225 T 19-04-2016 APA12_RS01510 d4df67e26a921c6a8b16471e2e69b37b 686 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 4 541 1.6E-175 T 19-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APA12_RS09025 b3f6199cf2435dccc2a71b4280763371 277 PANTHER PTHR20854:SF4 2 276 7.4E-84 T 19-04-2016 APA12_RS09025 b3f6199cf2435dccc2a71b4280763371 277 PRINTS PR01959 SuhB family inositol monophosphatase signature 113 132 2.0E-12 T 19-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 APA12_RS09025 b3f6199cf2435dccc2a71b4280763371 277 PRINTS PR01959 SuhB family inositol monophosphatase signature 21 43 2.0E-12 T 19-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 APA12_RS09025 b3f6199cf2435dccc2a71b4280763371 277 PRINTS PR01959 SuhB family inositol monophosphatase signature 209 221 2.0E-12 T 19-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 APA12_RS09025 b3f6199cf2435dccc2a71b4280763371 277 Gene3D G3DSA:3.40.190.80 159 273 3.9E-38 T 19-04-2016 APA12_RS09025 b3f6199cf2435dccc2a71b4280763371 277 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 222 236 - T 19-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 APA12_RS09025 b3f6199cf2435dccc2a71b4280763371 277 Gene3D G3DSA:3.30.540.10 3 158 6.8E-49 T 19-04-2016 APA12_RS09025 b3f6199cf2435dccc2a71b4280763371 277 SUPERFAMILY SSF56655 3 274 3.53E-81 T 19-04-2016 APA12_RS09025 b3f6199cf2435dccc2a71b4280763371 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 188 209 1.6E-54 T 19-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APA12_RS09025 b3f6199cf2435dccc2a71b4280763371 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 219 243 1.6E-54 T 19-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APA12_RS09025 b3f6199cf2435dccc2a71b4280763371 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 64 80 1.6E-54 T 19-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APA12_RS09025 b3f6199cf2435dccc2a71b4280763371 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 139 162 1.6E-54 T 19-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APA12_RS09025 b3f6199cf2435dccc2a71b4280763371 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 42 62 1.6E-54 T 19-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APA12_RS09025 b3f6199cf2435dccc2a71b4280763371 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 85 101 1.6E-54 T 19-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APA12_RS09025 b3f6199cf2435dccc2a71b4280763371 277 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 85 98 - T 19-04-2016 IPR020583 Inositol monophosphatase, metal-binding site APA12_RS09025 b3f6199cf2435dccc2a71b4280763371 277 Pfam PF00459 Inositol monophosphatase family 7 273 1.4E-61 T 19-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APA12_RS09025 b3f6199cf2435dccc2a71b4280763371 277 PANTHER PTHR20854 2 276 7.4E-84 T 19-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APA12_RS12850 78664aa4a211abf530f6d4d29680b7ac 218 SUPERFAMILY SSF118375 66 119 3.4E-5 T 19-04-2016 APA12_RS12850 78664aa4a211abf530f6d4d29680b7ac 218 SUPERFAMILY SSF118375 123 210 3.92E-6 T 19-04-2016 APA12_RS12850 78664aa4a211abf530f6d4d29680b7ac 218 Pfam PF01387 Synuclein 123 206 2.1E-6 T 19-04-2016 IPR001058 Synuclein APA12_RS12850 78664aa4a211abf530f6d4d29680b7ac 218 PANTHER PTHR23241 69 202 2.0E-14 T 19-04-2016 APA12_RS09165 121cb2999c37c291f8e9530ecc467d69 123 PANTHER PTHR30007 1 117 6.2E-51 T 19-04-2016 APA12_RS09165 121cb2999c37c291f8e9530ecc467d69 123 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 79 3.9E-26 T 19-04-2016 IPR025161 Putative transposase IS4/IS5 family APA12_RS09165 121cb2999c37c291f8e9530ecc467d69 123 PANTHER PTHR30007:SF21 1 117 6.2E-51 T 19-04-2016 APA12_RS05885 4a594cd9fff8ba8175bb5a4da59d5745 162 Pfam PF06073 Bacterial protein of unknown function (DUF934) 48 152 3.1E-35 T 19-04-2016 IPR008318 Uncharacterised conserved protein UCP030820 APA12_RS05885 4a594cd9fff8ba8175bb5a4da59d5745 162 PIRSF PIRSF030820 3 160 7.4E-36 T 19-04-2016 IPR008318 Uncharacterised conserved protein UCP030820 APA12_RS09835 c529c20f3da697741eed60814ed0bc22 493 PANTHER PTHR11785 1 143 1.3E-132 T 19-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APA12_RS09835 c529c20f3da697741eed60814ed0bc22 493 PANTHER PTHR11785 161 484 1.3E-132 T 19-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APA12_RS09835 c529c20f3da697741eed60814ed0bc22 493 PIRSF PIRSF006060 18 485 3.8E-91 T 19-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APA12_RS09835 c529c20f3da697741eed60814ed0bc22 493 Pfam PF13520 Amino acid permease 33 447 6.1E-50 T 19-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APA12_RS09835 c529c20f3da697741eed60814ed0bc22 493 PANTHER PTHR11785:SF328 1 143 1.3E-132 T 19-04-2016 APA12_RS09835 c529c20f3da697741eed60814ed0bc22 493 PANTHER PTHR11785:SF328 161 484 1.3E-132 T 19-04-2016 APA12_RS03385 489d13dcc228817529b275d198ee3ebd 391 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 115 152 - T 19-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 APA12_RS03385 489d13dcc228817529b275d198ee3ebd 391 SUPERFAMILY SSF55031 196 305 5.23E-26 T 19-04-2016 IPR011650 Peptidase M20, dimerisation domain APA12_RS03385 489d13dcc228817529b275d198ee3ebd 391 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 16 391 48.414 T 19-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 APA12_RS03385 489d13dcc228817529b275d198ee3ebd 391 PANTHER PTHR11014 19 387 3.6E-75 T 19-04-2016 APA12_RS03385 489d13dcc228817529b275d198ee3ebd 391 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 21 387 2.4E-130 T 19-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 APA12_RS03385 489d13dcc228817529b275d198ee3ebd 391 Pfam PF01546 Peptidase family M20/M25/M40 82 387 2.3E-41 T 19-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APA12_RS03385 489d13dcc228817529b275d198ee3ebd 391 SUPERFAMILY SSF53187 16 195 2.43E-59 T 19-04-2016 APA12_RS03385 489d13dcc228817529b275d198ee3ebd 391 SUPERFAMILY SSF53187 309 387 2.43E-59 T 19-04-2016 APA12_RS03385 489d13dcc228817529b275d198ee3ebd 391 Gene3D G3DSA:3.30.70.360 205 305 1.3E-30 T 19-04-2016 IPR011650 Peptidase M20, dimerisation domain APA12_RS03385 489d13dcc228817529b275d198ee3ebd 391 Gene3D G3DSA:3.40.630.10 333 387 1.1E-64 T 19-04-2016 APA12_RS03385 489d13dcc228817529b275d198ee3ebd 391 Gene3D G3DSA:3.40.630.10 19 204 1.1E-64 T 19-04-2016 APA12_RS03385 489d13dcc228817529b275d198ee3ebd 391 Pfam PF07687 Peptidase dimerisation domain 192 298 4.2E-22 T 19-04-2016 IPR011650 Peptidase M20, dimerisation domain APA12_RS10060 9efee0aab66998dd47864b7b7673e678 1518 Gene3D G3DSA:2.160.20.60 1249 1507 1.0E-92 T 19-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 APA12_RS10060 9efee0aab66998dd47864b7b7673e678 1518 Pfam PF00310 Glutamine amidotransferases class-II 42 459 4.4E-149 T 19-04-2016 IPR017932 Glutamine amidotransferase type 2 domain APA12_RS10060 9efee0aab66998dd47864b7b7673e678 1518 Pfam PF01645 Conserved region in glutamate synthase 833 1195 1.0E-152 T 19-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 APA12_RS10060 9efee0aab66998dd47864b7b7673e678 1518 Gene3D G3DSA:3.20.20.70 475 817 9.6E-89 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS10060 9efee0aab66998dd47864b7b7673e678 1518 PANTHER PTHR11938 31 1515 0.0 T 19-04-2016 APA12_RS10060 9efee0aab66998dd47864b7b7673e678 1518 PANTHER PTHR11938:SF1 31 1515 0.0 T 19-04-2016 APA12_RS10060 9efee0aab66998dd47864b7b7673e678 1518 SUPERFAMILY SSF69336 1244 1506 9.55E-90 T 19-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 APA12_RS10060 9efee0aab66998dd47864b7b7673e678 1518 Pfam PF01493 GXGXG motif 1272 1460 1.6E-73 T 19-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 APA12_RS10060 9efee0aab66998dd47864b7b7673e678 1518 SUPERFAMILY SSF56235 42 461 9.65E-138 T 19-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APA12_RS10060 9efee0aab66998dd47864b7b7673e678 1518 SUPERFAMILY SSF51395 473 1230 1.01E-258 T 19-04-2016 APA12_RS10060 9efee0aab66998dd47864b7b7673e678 1518 Pfam PF04898 Glutamate synthase central domain 488 769 1.1E-97 T 19-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 APA12_RS10060 9efee0aab66998dd47864b7b7673e678 1518 Gene3D G3DSA:3.20.20.70 855 1217 6.2E-170 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS10060 9efee0aab66998dd47864b7b7673e678 1518 Gene3D G3DSA:3.60.20.10 42 464 1.8E-153 T 19-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APA12_RS08700 33317ec278906eb6fadfa38792e2419d 467 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 430 6.9E-178 T 19-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 APA12_RS08700 33317ec278906eb6fadfa38792e2419d 467 Pfam PF00448 SRP54-type protein, GTPase domain 104 297 1.6E-69 T 19-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APA12_RS08700 33317ec278906eb6fadfa38792e2419d 467 SMART SM00963 1 86 2.1E-28 T 19-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APA12_RS08700 33317ec278906eb6fadfa38792e2419d 467 PANTHER PTHR11564 1 435 1.1E-225 T 19-04-2016 APA12_RS08700 33317ec278906eb6fadfa38792e2419d 467 SUPERFAMILY SSF47364 2 88 3.59E-23 T 19-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APA12_RS08700 33317ec278906eb6fadfa38792e2419d 467 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 270 283 - T 19-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APA12_RS08700 33317ec278906eb6fadfa38792e2419d 467 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 448 32.834 T 19-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 APA12_RS08700 33317ec278906eb6fadfa38792e2419d 467 Gene3D G3DSA:1.20.120.140 2 88 1.7E-29 T 19-04-2016 APA12_RS08700 33317ec278906eb6fadfa38792e2419d 467 SUPERFAMILY SSF52540 95 299 3.65E-50 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS08700 33317ec278906eb6fadfa38792e2419d 467 Gene3D G3DSA:1.10.260.30 328 432 7.4E-38 T 19-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 APA12_RS08700 33317ec278906eb6fadfa38792e2419d 467 Pfam PF02978 Signal peptide binding domain 328 428 3.3E-32 T 19-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 APA12_RS08700 33317ec278906eb6fadfa38792e2419d 467 SMART SM00962 101 297 1.0E-108 T 19-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APA12_RS08700 33317ec278906eb6fadfa38792e2419d 467 Gene3D G3DSA:3.40.50.300 95 297 5.3E-72 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS08700 33317ec278906eb6fadfa38792e2419d 467 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 4.7E-18 T 19-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APA12_RS08700 33317ec278906eb6fadfa38792e2419d 467 SMART SM00382 100 302 9.0E-7 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS08700 33317ec278906eb6fadfa38792e2419d 467 SUPERFAMILY SSF47446 299 431 1.57E-44 T 19-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 APA12_RS08700 33317ec278906eb6fadfa38792e2419d 467 PANTHER PTHR11564:SF7 1 435 1.1E-225 T 19-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 APA12_RS09325 df4f2db8c064b4e1a2a69c48d0af4256 192 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 6 186 3.0E-53 T 19-04-2016 IPR006286 Peptidase C56, PfpI GO:0016798 APA12_RS09325 df4f2db8c064b4e1a2a69c48d0af4256 192 PANTHER PTHR11019 111 144 6.0E-53 T 19-04-2016 APA12_RS09325 df4f2db8c064b4e1a2a69c48d0af4256 192 PANTHER PTHR11019 6 95 6.0E-53 T 19-04-2016 APA12_RS09325 df4f2db8c064b4e1a2a69c48d0af4256 192 Gene3D G3DSA:3.40.50.880 6 186 9.0E-53 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like APA12_RS09325 df4f2db8c064b4e1a2a69c48d0af4256 192 PANTHER PTHR11019:SF112 111 144 6.0E-53 T 19-04-2016 APA12_RS09325 df4f2db8c064b4e1a2a69c48d0af4256 192 PANTHER PTHR11019:SF112 6 95 6.0E-53 T 19-04-2016 APA12_RS09325 df4f2db8c064b4e1a2a69c48d0af4256 192 Pfam PF01965 DJ-1/PfpI family 6 184 9.0E-46 T 19-04-2016 IPR002818 DJ-1/PfpI APA12_RS09325 df4f2db8c064b4e1a2a69c48d0af4256 192 SUPERFAMILY SSF52317 6 187 7.84E-46 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like APA12_RS13905 23ed7a68b285a5876a5232d4d43a0bcb 227 PANTHER PTHR10724:SF6 1 189 2.2E-79 T 19-04-2016 APA12_RS13905 23ed7a68b285a5876a5232d4d43a0bcb 227 Gene3D G3DSA:2.40.50.140 119 195 3.3E-17 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS13905 23ed7a68b285a5876a5232d4d43a0bcb 227 PANTHER PTHR10724 1 189 2.2E-79 T 19-04-2016 APA12_RS13905 23ed7a68b285a5876a5232d4d43a0bcb 227 Pfam PF00575 S1 RNA binding domain 123 195 3.5E-13 T 19-04-2016 IPR003029 S1 domain GO:0003676 APA12_RS13905 23ed7a68b285a5876a5232d4d43a0bcb 227 Pfam PF00575 S1 RNA binding domain 35 109 1.3E-18 T 19-04-2016 IPR003029 S1 domain GO:0003676 APA12_RS13905 23ed7a68b285a5876a5232d4d43a0bcb 227 Gene3D G3DSA:2.40.50.140 1 33 4.1E-9 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS13905 23ed7a68b285a5876a5232d4d43a0bcb 227 Gene3D G3DSA:2.40.50.140 34 114 1.6E-27 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS13905 23ed7a68b285a5876a5232d4d43a0bcb 227 SUPERFAMILY SSF50249 17 122 2.86E-25 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS13905 23ed7a68b285a5876a5232d4d43a0bcb 227 SMART SM00316 37 109 1.3E-21 T 19-04-2016 IPR022967 RNA-binding domain, S1 APA12_RS13905 23ed7a68b285a5876a5232d4d43a0bcb 227 SMART SM00316 124 195 6.7E-16 T 19-04-2016 IPR022967 RNA-binding domain, S1 APA12_RS13905 23ed7a68b285a5876a5232d4d43a0bcb 227 SUPERFAMILY SSF50249 107 209 7.46E-18 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS05045 d16670706fa69d366a7bd3e0cee97a22 777 Gene3D G3DSA:2.60.450.10 58 210 2.4E-20 T 19-04-2016 APA12_RS05045 d16670706fa69d366a7bd3e0cee97a22 777 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 19 773 15.829 T 19-04-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 APA12_RS05045 d16670706fa69d366a7bd3e0cee97a22 777 PANTHER PTHR30189 42 763 7.5E-34 T 19-04-2016 APA12_RS05045 d16670706fa69d366a7bd3e0cee97a22 777 Pfam PF03968 OstA-like protein 66 132 1.5E-6 T 19-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal APA12_RS05045 d16670706fa69d366a7bd3e0cee97a22 777 Pfam PF04453 Organic solvent tolerance protein 328 689 2.0E-63 T 19-04-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 APA12_RS10575 fb671a03d27afa9c411af1e1fd5b060e 585 PANTHER PTHR10357:SF110 7 462 2.4E-102 T 19-04-2016 APA12_RS10575 fb671a03d27afa9c411af1e1fd5b060e 585 PANTHER PTHR10357:SF110 489 550 2.4E-102 T 19-04-2016 APA12_RS10575 fb671a03d27afa9c411af1e1fd5b060e 585 Pfam PF00128 Alpha amylase, catalytic domain 124 209 9.0E-14 T 19-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APA12_RS10575 fb671a03d27afa9c411af1e1fd5b060e 585 Pfam PF00128 Alpha amylase, catalytic domain 233 425 1.3E-4 T 19-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APA12_RS10575 fb671a03d27afa9c411af1e1fd5b060e 585 Gene3D G3DSA:2.60.40.10 11 95 2.6E-24 T 19-04-2016 IPR013783 Immunoglobulin-like fold APA12_RS10575 fb671a03d27afa9c411af1e1fd5b060e 585 TIGRFAM TIGR02402 trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase 21 553 1.0E-194 T 19-04-2016 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6902|UniPathway: UPA00299 APA12_RS10575 fb671a03d27afa9c411af1e1fd5b060e 585 PIRSF PIRSF006337 6 569 1.1E-209 T 19-04-2016 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6902|UniPathway: UPA00299 APA12_RS10575 fb671a03d27afa9c411af1e1fd5b060e 585 Pfam PF11941 Domain of unknown function (DUF3459) 496 579 2.3E-12 T 19-04-2016 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) APA12_RS10575 fb671a03d27afa9c411af1e1fd5b060e 585 PANTHER PTHR10357 7 462 2.4E-102 T 19-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APA12_RS10575 fb671a03d27afa9c411af1e1fd5b060e 585 PANTHER PTHR10357 489 550 2.4E-102 T 19-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APA12_RS10575 fb671a03d27afa9c411af1e1fd5b060e 585 SUPERFAMILY SSF51445 92 506 4.99E-99 T 19-04-2016 IPR017853 Glycoside hydrolase superfamily APA12_RS10575 fb671a03d27afa9c411af1e1fd5b060e 585 SMART SM00642 91 452 5.8E-9 T 19-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APA12_RS10575 fb671a03d27afa9c411af1e1fd5b060e 585 Gene3D G3DSA:3.20.20.80 109 429 6.4E-75 T 19-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APA12_RS10575 fb671a03d27afa9c411af1e1fd5b060e 585 Gene3D G3DSA:3.20.20.80 481 506 6.4E-75 T 19-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APA12_RS10575 fb671a03d27afa9c411af1e1fd5b060e 585 SUPERFAMILY SSF81296 6 95 1.8E-15 T 19-04-2016 IPR014756 Immunoglobulin E-set APA12_RS12125 e4ff0f3fd5a753746bf971a5281d074b 296 Pfam PF13276 HTH-like domain 45 100 1.3E-17 T 19-04-2016 IPR025948 HTH-like domain APA12_RS12125 e4ff0f3fd5a753746bf971a5281d074b 296 SUPERFAMILY SSF53098 118 283 2.88E-36 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS12125 e4ff0f3fd5a753746bf971a5281d074b 296 Pfam PF00665 Integrase core domain 125 239 1.6E-25 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APA12_RS12125 e4ff0f3fd5a753746bf971a5281d074b 296 Gene3D G3DSA:3.30.420.10 119 279 2.7E-34 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS12125 e4ff0f3fd5a753746bf971a5281d074b 296 PANTHER PTHR32552 3 295 1.8E-70 T 19-04-2016 APA12_RS06230 e2c1c081f0beae4a294c959da215f5b1 279 Gene3D G3DSA:1.10.8.50 132 277 1.2E-47 T 19-04-2016 APA12_RS06230 e2c1c081f0beae4a294c959da215f5b1 279 SUPERFAMILY SSF46946 133 224 2.75E-29 T 19-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 APA12_RS06230 e2c1c081f0beae4a294c959da215f5b1 279 SMART SM00898 2 116 2.0E-40 T 19-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 APA12_RS06230 e2c1c081f0beae4a294c959da215f5b1 279 SMART SM01232 132 224 3.0E-48 T 19-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 APA12_RS06230 e2c1c081f0beae4a294c959da215f5b1 279 PANTHER PTHR22993 1 278 3.7E-107 T 19-04-2016 APA12_RS06230 e2c1c081f0beae4a294c959da215f5b1 279 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 276 4.1E-84 T 19-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 APA12_RS06230 e2c1c081f0beae4a294c959da215f5b1 279 PANTHER PTHR22993:SF15 1 278 3.7E-107 T 19-04-2016 APA12_RS06230 e2c1c081f0beae4a294c959da215f5b1 279 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 132 221 6.4E-25 T 19-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 APA12_RS06230 e2c1c081f0beae4a294c959da215f5b1 279 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 277 39.737 T 19-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 APA12_RS06230 e2c1c081f0beae4a294c959da215f5b1 279 SUPERFAMILY SSF57716 220 277 5.42E-12 T 19-04-2016 APA12_RS06230 e2c1c081f0beae4a294c959da215f5b1 279 Gene3D G3DSA:3.20.190.10 2 127 5.2E-35 T 19-04-2016 APA12_RS06230 e2c1c081f0beae4a294c959da215f5b1 279 SUPERFAMILY SSF81624 2 141 1.16E-34 T 19-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 APA12_RS06230 e2c1c081f0beae4a294c959da215f5b1 279 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 6.3E-32 T 19-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 APA12_RS12715 d5c7a5896544f7ee3416ec684d76f342 427 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 196 214 1.3E-21 T 19-04-2016 IPR001270 ClpA/B family GO:0005524 APA12_RS12715 d5c7a5896544f7ee3416ec684d76f342 427 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 259 273 1.3E-21 T 19-04-2016 IPR001270 ClpA/B family GO:0005524 APA12_RS12715 d5c7a5896544f7ee3416ec684d76f342 427 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 154 172 1.3E-21 T 19-04-2016 IPR001270 ClpA/B family GO:0005524 APA12_RS12715 d5c7a5896544f7ee3416ec684d76f342 427 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 225 243 1.3E-21 T 19-04-2016 IPR001270 ClpA/B family GO:0005524 APA12_RS12715 d5c7a5896544f7ee3416ec684d76f342 427 PANTHER PTHR11638:SF18 112 427 3.3E-45 T 19-04-2016 APA12_RS12715 d5c7a5896544f7ee3416ec684d76f342 427 PANTHER PTHR11638:SF18 85 91 3.3E-45 T 19-04-2016 APA12_RS12715 d5c7a5896544f7ee3416ec684d76f342 427 Pfam PF07724 AAA domain (Cdc48 subfamily) 150 313 1.7E-28 T 19-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APA12_RS12715 d5c7a5896544f7ee3416ec684d76f342 427 PANTHER PTHR11638 112 427 3.3E-45 T 19-04-2016 APA12_RS12715 d5c7a5896544f7ee3416ec684d76f342 427 PANTHER PTHR11638 85 91 3.3E-45 T 19-04-2016 APA12_RS12715 d5c7a5896544f7ee3416ec684d76f342 427 Gene3D G3DSA:3.40.50.300 112 334 1.6E-37 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS12715 d5c7a5896544f7ee3416ec684d76f342 427 SUPERFAMILY SSF52540 108 381 1.73E-45 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS12715 d5c7a5896544f7ee3416ec684d76f342 427 SMART SM00382 150 302 2.7E-10 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS06335 97f9ca5e7b4e6a10627fb1d445b46938 499 Gene3D G3DSA:3.30.420.40 253 494 2.2E-95 T 19-04-2016 APA12_RS06335 97f9ca5e7b4e6a10627fb1d445b46938 499 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 135 147 - T 19-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APA12_RS06335 97f9ca5e7b4e6a10627fb1d445b46938 499 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 361 381 - T 19-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APA12_RS06335 97f9ca5e7b4e6a10627fb1d445b46938 499 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 251 6.2E-77 T 19-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 APA12_RS06335 97f9ca5e7b4e6a10627fb1d445b46938 499 PANTHER PTHR10196 7 496 1.3E-245 T 19-04-2016 APA12_RS06335 97f9ca5e7b4e6a10627fb1d445b46938 499 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 6 493 1.4E-214 T 19-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APA12_RS06335 97f9ca5e7b4e6a10627fb1d445b46938 499 PANTHER PTHR10196:SF44 7 496 1.3E-245 T 19-04-2016 APA12_RS06335 97f9ca5e7b4e6a10627fb1d445b46938 499 Gene3D G3DSA:3.30.420.40 2 252 2.1E-102 T 19-04-2016 APA12_RS06335 97f9ca5e7b4e6a10627fb1d445b46938 499 SUPERFAMILY SSF53067 254 496 1.4E-80 T 19-04-2016 APA12_RS06335 97f9ca5e7b4e6a10627fb1d445b46938 499 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 260 449 3.5E-54 T 19-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 APA12_RS06335 97f9ca5e7b4e6a10627fb1d445b46938 499 SUPERFAMILY SSF53067 6 254 1.75E-93 T 19-04-2016 APA12_RS06335 97f9ca5e7b4e6a10627fb1d445b46938 499 PIRSF PIRSF000538 4 498 8.6E-174 T 19-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APA12_RS06335 97f9ca5e7b4e6a10627fb1d445b46938 499 Hamap MF_00186 Glycerol kinase [glpK]. 4 496 54.021 T 19-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APA12_RS04060 66fe8823fc570d8d16d181a49a899c92 304 SUPERFAMILY SSF102886 12 304 9.29E-110 T 19-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APA12_RS04060 66fe8823fc570d8d16d181a49a899c92 304 PRINTS PR00073 Coprogen oxidase signature 261 288 1.1E-41 T 19-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APA12_RS04060 66fe8823fc570d8d16d181a49a899c92 304 PRINTS PR00073 Coprogen oxidase signature 119 143 1.1E-41 T 19-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APA12_RS04060 66fe8823fc570d8d16d181a49a899c92 304 PRINTS PR00073 Coprogen oxidase signature 56 72 1.1E-41 T 19-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APA12_RS04060 66fe8823fc570d8d16d181a49a899c92 304 PRINTS PR00073 Coprogen oxidase signature 289 304 1.1E-41 T 19-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APA12_RS04060 66fe8823fc570d8d16d181a49a899c92 304 PRINTS PR00073 Coprogen oxidase signature 189 218 1.1E-41 T 19-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APA12_RS04060 66fe8823fc570d8d16d181a49a899c92 304 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 193 217 - T 19-04-2016 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APA12_RS04060 66fe8823fc570d8d16d181a49a899c92 304 PANTHER PTHR10755 55 303 3.0E-119 T 19-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APA12_RS04060 66fe8823fc570d8d16d181a49a899c92 304 PANTHER PTHR10755 15 39 3.0E-119 T 19-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APA12_RS04060 66fe8823fc570d8d16d181a49a899c92 304 Pfam PF01218 Coproporphyrinogen III oxidase 21 303 4.0E-91 T 19-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APA12_RS04060 66fe8823fc570d8d16d181a49a899c92 304 PIRSF PIRSF000166 1 304 3.6E-109 T 19-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APA12_RS04060 66fe8823fc570d8d16d181a49a899c92 304 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 13 304 51.728 T 19-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APA12_RS04060 66fe8823fc570d8d16d181a49a899c92 304 Gene3D G3DSA:3.40.1500.10 10 303 5.5E-111 T 19-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APA12_RS09360 3de607840ff47e21071a307531a1644d 320 Gene3D G3DSA:2.40.50.100 154 187 2.2E-16 T 19-04-2016 APA12_RS09360 3de607840ff47e21071a307531a1644d 320 Gene3D G3DSA:2.40.50.100 47 80 2.2E-16 T 19-04-2016 APA12_RS09360 3de607840ff47e21071a307531a1644d 320 SUPERFAMILY SSF111369 45 182 5.62E-20 T 19-04-2016 APA12_RS09360 3de607840ff47e21071a307531a1644d 320 Pfam PF13437 HlyD family secretion protein 157 235 2.2E-6 T 19-04-2016 APA12_RS09360 3de607840ff47e21071a307531a1644d 320 PANTHER PTHR30367 1 286 5.4E-110 T 19-04-2016 APA12_RS09360 3de607840ff47e21071a307531a1644d 320 Pfam PF13533 Biotin-lipoyl like 47 92 9.5E-14 T 19-04-2016 APA12_RS09360 3de607840ff47e21071a307531a1644d 320 PANTHER PTHR30367:SF5 1 286 5.4E-110 T 19-04-2016 APA12_RS04570 b73b73c472b0d49b047476aa3df42d66 324 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 114 291 1.7E-55 T 19-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 APA12_RS04570 b73b73c472b0d49b047476aa3df42d66 324 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 231 247 - T 19-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APA12_RS04570 b73b73c472b0d49b047476aa3df42d66 324 SUPERFAMILY SSF52283 33 135 8.51E-18 T 19-04-2016 APA12_RS04570 b73b73c472b0d49b047476aa3df42d66 324 Gene3D G3DSA:3.40.50.720 122 294 2.8E-60 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS04570 b73b73c472b0d49b047476aa3df42d66 324 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 35 322 4.0E-19 T 19-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 APA12_RS04570 b73b73c472b0d49b047476aa3df42d66 324 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 19-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 APA12_RS04570 b73b73c472b0d49b047476aa3df42d66 324 SUPERFAMILY SSF51735 108 292 1.61E-55 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS04570 b73b73c472b0d49b047476aa3df42d66 324 PANTHER PTHR10996 52 322 5.5E-105 T 19-04-2016 APA12_RS04570 b73b73c472b0d49b047476aa3df42d66 324 Gene3D G3DSA:3.40.50.720 42 121 3.8E-23 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS02155 6e36a1b1d9c7643884ffdf1b7139ca8a 328 Gene3D G3DSA:3.30.420.40 3 134 5.5E-4 T 19-04-2016 APA12_RS02155 6e36a1b1d9c7643884ffdf1b7139ca8a 328 PANTHER PTHR12862 7 326 7.5E-40 T 19-04-2016 APA12_RS02155 6e36a1b1d9c7643884ffdf1b7139ca8a 328 SUPERFAMILY SSF53067 6 109 2.48E-12 T 19-04-2016 APA12_RS02155 6e36a1b1d9c7643884ffdf1b7139ca8a 328 SUPERFAMILY SSF53067 113 314 1.61E-31 T 19-04-2016 APA12_RS02155 6e36a1b1d9c7643884ffdf1b7139ca8a 328 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 10 281 5.3E-19 T 19-04-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type APA12_RS09330 590f8c738680e180fb0843d972f9b3bf 184 PANTHER PTHR10192 6 175 1.1E-80 T 19-04-2016 APA12_RS09330 590f8c738680e180fb0843d972f9b3bf 184 Pfam PF00994 Probable molybdopterin binding domain 16 157 6.4E-35 T 19-04-2016 IPR001453 MoaB/Mog domain APA12_RS09330 590f8c738680e180fb0843d972f9b3bf 184 Gene3D G3DSA:3.40.980.10 11 166 1.1E-48 T 19-04-2016 IPR001453 MoaB/Mog domain APA12_RS09330 590f8c738680e180fb0843d972f9b3bf 184 SUPERFAMILY SSF53218 9 172 3.01E-47 T 19-04-2016 IPR001453 MoaB/Mog domain APA12_RS09330 590f8c738680e180fb0843d972f9b3bf 184 PANTHER PTHR10192:SF18 6 175 1.1E-80 T 19-04-2016 APA12_RS09330 590f8c738680e180fb0843d972f9b3bf 184 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 10 171 2.0E-77 T 19-04-2016 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 UniPathway: UPA00344 APA12_RS09330 590f8c738680e180fb0843d972f9b3bf 184 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 74 87 - T 19-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 APA12_RS09330 590f8c738680e180fb0843d972f9b3bf 184 SMART SM00852 16 160 3.3E-34 T 19-04-2016 IPR001453 MoaB/Mog domain APA12_RS09330 590f8c738680e180fb0843d972f9b3bf 184 PIRSF PIRSF006443 1 168 4.6E-61 T 19-04-2016 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 UniPathway: UPA00344 APA12_RS09330 590f8c738680e180fb0843d972f9b3bf 184 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 13 152 2.0E-37 T 19-04-2016 IPR001453 MoaB/Mog domain APA12_RS09830 0f0605eb7952004f52e7e9d5d22f5391 430 Gene3D G3DSA:3.90.1150.10 291 428 1.3E-55 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APA12_RS09830 0f0605eb7952004f52e7e9d5d22f5391 430 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 228 244 - T 19-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 APA12_RS09830 0f0605eb7952004f52e7e9d5d22f5391 430 Pfam PF00464 Serine hydroxymethyltransferase 14 391 4.1E-174 T 19-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 APA12_RS09830 0f0605eb7952004f52e7e9d5d22f5391 430 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 13 428 53.306 T 19-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 APA12_RS09830 0f0605eb7952004f52e7e9d5d22f5391 430 Gene3D G3DSA:3.40.640.10 43 290 1.5E-106 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APA12_RS09830 0f0605eb7952004f52e7e9d5d22f5391 430 SUPERFAMILY SSF53383 6 428 2.5E-181 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APA12_RS09830 0f0605eb7952004f52e7e9d5d22f5391 430 PIRSF PIRSF000412 3 430 9.4E-175 T 19-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 APA12_RS09830 0f0605eb7952004f52e7e9d5d22f5391 430 PANTHER PTHR11680 5 427 2.8E-248 T 19-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 APA12_RS06400 bbd21372ae5312ea677ea39ecf3b0909 602 Gene3D G3DSA:3.40.50.300 8 231 4.0E-45 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS06400 bbd21372ae5312ea677ea39ecf3b0909 602 Pfam PF00005 ABC transporter 301 434 1.3E-22 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS06400 bbd21372ae5312ea677ea39ecf3b0909 602 Pfam PF00005 ABC transporter 23 149 1.9E-22 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS06400 bbd21372ae5312ea677ea39ecf3b0909 602 Pfam PF16326 ABC transporter C-terminal domain 525 593 4.5E-19 T 19-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 APA12_RS06400 bbd21372ae5312ea677ea39ecf3b0909 602 Gene3D G3DSA:3.40.50.300 287 499 3.7E-46 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS06400 bbd21372ae5312ea677ea39ecf3b0909 602 SUPERFAMILY SSF52540 4 196 2.8E-44 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS06400 bbd21372ae5312ea677ea39ecf3b0909 602 SMART SM00382 31 194 6.6E-14 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS06400 bbd21372ae5312ea677ea39ecf3b0909 602 SMART SM00382 308 479 1.3E-11 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS06400 bbd21372ae5312ea677ea39ecf3b0909 602 SUPERFAMILY SSF52540 276 493 1.27E-47 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS06400 bbd21372ae5312ea677ea39ecf3b0909 602 PANTHER PTHR19211 7 535 2.6E-153 T 19-04-2016 APA12_RS05195 10abe05a72694332a7d95a8f10ec1b49 490 PRINTS PR00084 Mannitol dehydrogenase signature 253 268 2.9E-19 T 19-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APA12_RS05195 10abe05a72694332a7d95a8f10ec1b49 490 PRINTS PR00084 Mannitol dehydrogenase signature 184 197 2.9E-19 T 19-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APA12_RS05195 10abe05a72694332a7d95a8f10ec1b49 490 PRINTS PR00084 Mannitol dehydrogenase signature 223 236 2.9E-19 T 19-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APA12_RS05195 10abe05a72694332a7d95a8f10ec1b49 490 PRINTS PR00084 Mannitol dehydrogenase signature 30 40 2.9E-19 T 19-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APA12_RS05195 10abe05a72694332a7d95a8f10ec1b49 490 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 29 193 6.9E-40 T 19-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 APA12_RS05195 10abe05a72694332a7d95a8f10ec1b49 490 PANTHER PTHR30562 19 487 2.4E-124 T 19-04-2016 APA12_RS05195 10abe05a72694332a7d95a8f10ec1b49 490 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 221 461 7.0E-66 T 19-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 APA12_RS05195 10abe05a72694332a7d95a8f10ec1b49 490 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 223 235 - T 19-04-2016 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APA12_RS05195 10abe05a72694332a7d95a8f10ec1b49 490 Gene3D G3DSA:3.40.50.720 5 286 9.7E-104 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS05195 10abe05a72694332a7d95a8f10ec1b49 490 Gene3D G3DSA:1.10.1040.10 287 488 4.0E-53 T 19-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APA12_RS05195 10abe05a72694332a7d95a8f10ec1b49 490 SUPERFAMILY SSF51735 4 287 5.51E-91 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS05195 10abe05a72694332a7d95a8f10ec1b49 490 PANTHER PTHR30562:SF4 19 487 2.4E-124 T 19-04-2016 APA12_RS05195 10abe05a72694332a7d95a8f10ec1b49 490 SUPERFAMILY SSF48179 288 488 4.42E-47 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APA12_RS05475 74cf614e8a77a64f90c4e963def2d47f 637 Hamap MF_00203 UvrABC system protein C [uvrC]. 26 629 27.218 T 19-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 APA12_RS05475 74cf614e8a77a64f90c4e963def2d47f 637 Pfam PF02151 UvrB/uvrC motif 232 258 2.1E-8 T 19-04-2016 IPR001943 UVR domain GO:0005515 APA12_RS05475 74cf614e8a77a64f90c4e963def2d47f 637 SMART SM00278 578 597 1.6 T 19-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APA12_RS05475 74cf614e8a77a64f90c4e963def2d47f 637 SMART SM00278 610 629 6.4 T 19-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APA12_RS05475 74cf614e8a77a64f90c4e963def2d47f 637 Pfam PF14520 Helix-hairpin-helix domain 579 626 4.0E-8 T 19-04-2016 APA12_RS05475 74cf614e8a77a64f90c4e963def2d47f 637 Gene3D G3DSA:4.10.860.10 205 263 5.2E-16 T 19-04-2016 IPR001943 UVR domain GO:0005515 APA12_RS05475 74cf614e8a77a64f90c4e963def2d47f 637 Gene3D G3DSA:1.10.150.20 578 631 1.5E-20 T 19-04-2016 APA12_RS05475 74cf614e8a77a64f90c4e963def2d47f 637 PANTHER PTHR30562 1 630 2.1E-241 T 19-04-2016 APA12_RS05475 74cf614e8a77a64f90c4e963def2d47f 637 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 404 564 4.8E-49 T 19-04-2016 IPR001162 UvrC family homology region APA12_RS05475 74cf614e8a77a64f90c4e963def2d47f 637 SUPERFAMILY SSF47781 547 634 4.45E-21 T 19-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APA12_RS05475 74cf614e8a77a64f90c4e963def2d47f 637 Pfam PF01541 GIY-YIG catalytic domain 41 113 4.1E-5 T 19-04-2016 IPR000305 GIY-YIG nuclease superfamily APA12_RS05475 74cf614e8a77a64f90c4e963def2d47f 637 Gene3D G3DSA:3.40.1440.10 40 119 3.6E-7 T 19-04-2016 IPR027299 GIY-YIG domain APA12_RS05475 74cf614e8a77a64f90c4e963def2d47f 637 SUPERFAMILY SSF82771 40 122 8.63E-18 T 19-04-2016 IPR000305 GIY-YIG nuclease superfamily APA12_RS05475 74cf614e8a77a64f90c4e963def2d47f 637 PANTHER PTHR30562:SF1 1 630 2.1E-241 T 19-04-2016 APA12_RS05475 74cf614e8a77a64f90c4e963def2d47f 637 SUPERFAMILY SSF46600 213 263 7.06E-12 T 19-04-2016 IPR001943 UVR domain GO:0005515 APA12_RS05475 74cf614e8a77a64f90c4e963def2d47f 637 SMART SM00465 39 120 3.4E-13 T 19-04-2016 IPR000305 GIY-YIG nuclease superfamily APA12_RS05475 74cf614e8a77a64f90c4e963def2d47f 637 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 31 610 5.1E-164 T 19-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 APA12_RS06350 5b5a2f8ec65322cb3ed1dbd7ecef4298 256 PANTHER PTHR30363:SF1 1 256 9.8E-97 T 19-04-2016 APA12_RS06350 5b5a2f8ec65322cb3ed1dbd7ecef4298 256 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 19-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 APA12_RS06350 5b5a2f8ec65322cb3ed1dbd7ecef4298 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 26 40 4.8E-10 T 19-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APA12_RS06350 5b5a2f8ec65322cb3ed1dbd7ecef4298 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 40 58 4.8E-10 T 19-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APA12_RS06350 5b5a2f8ec65322cb3ed1dbd7ecef4298 256 PANTHER PTHR30363 1 256 9.8E-97 T 19-04-2016 APA12_RS06350 5b5a2f8ec65322cb3ed1dbd7ecef4298 256 SMART SM01134 74 235 1.9E-65 T 19-04-2016 APA12_RS06350 5b5a2f8ec65322cb3ed1dbd7ecef4298 256 Pfam PF08220 DeoR-like helix-turn-helix domain 8 62 2.3E-17 T 19-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APA12_RS06350 5b5a2f8ec65322cb3ed1dbd7ecef4298 256 Gene3D G3DSA:1.10.10.10 7 58 1.2E-11 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS06350 5b5a2f8ec65322cb3ed1dbd7ecef4298 256 SMART SM00420 8 60 1.6E-15 T 19-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APA12_RS06350 5b5a2f8ec65322cb3ed1dbd7ecef4298 256 Pfam PF00455 DeoR C terminal sensor domain 76 234 8.4E-49 T 19-04-2016 IPR014036 DeoR C-terminal sensor domain APA12_RS06350 5b5a2f8ec65322cb3ed1dbd7ecef4298 256 SUPERFAMILY SSF46785 6 79 1.48E-13 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS06350 5b5a2f8ec65322cb3ed1dbd7ecef4298 256 SUPERFAMILY SSF100950 75 235 3.68E-27 T 19-04-2016 APA12_RS06350 5b5a2f8ec65322cb3ed1dbd7ecef4298 256 Gene3D G3DSA:3.30.750.70 79 157 4.2E-12 T 19-04-2016 APA12_RS10080 2a894c50f9381a84af624928598384c8 312 PANTHER PTHR22911 1 309 8.6E-48 T 19-04-2016 APA12_RS10080 2a894c50f9381a84af624928598384c8 312 SUPERFAMILY SSF103481 197 281 1.12E-12 T 19-04-2016 APA12_RS10080 2a894c50f9381a84af624928598384c8 312 Pfam PF00892 EamA-like transporter family 8 141 4.9E-10 T 19-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APA12_RS10080 2a894c50f9381a84af624928598384c8 312 Pfam PF00892 EamA-like transporter family 150 276 3.9E-11 T 19-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APA12_RS10080 2a894c50f9381a84af624928598384c8 312 SUPERFAMILY SSF103481 47 145 2.09E-11 T 19-04-2016 APA12_RS10750 06c90bbf7729f0fb194554b3e85d8a0d 303 PANTHER PTHR33969 24 302 2.4E-45 T 19-04-2016 APA12_RS10750 06c90bbf7729f0fb194554b3e85d8a0d 303 Pfam PF02616 Segregation and condensation protein ScpA 55 277 2.1E-13 T 19-04-2016 IPR003768 Segregation and condensation protein A APA12_RS10750 06c90bbf7729f0fb194554b3e85d8a0d 303 PANTHER PTHR33969:SF2 24 302 2.4E-45 T 19-04-2016 APA12_RS06255 c14c5664d54cb5e9ace659883443f689 451 PANTHER PTHR24220 278 308 1.3E-113 T 19-04-2016 APA12_RS06255 c14c5664d54cb5e9ace659883443f689 451 PANTHER PTHR24220 18 258 1.3E-113 T 19-04-2016 APA12_RS06255 c14c5664d54cb5e9ace659883443f689 451 PANTHER PTHR24220 329 438 1.3E-113 T 19-04-2016 APA12_RS06255 c14c5664d54cb5e9ace659883443f689 451 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APA12_RS06255 c14c5664d54cb5e9ace659883443f689 451 SUPERFAMILY SSF52540 18 260 1.72E-67 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS06255 c14c5664d54cb5e9ace659883443f689 451 SMART SM00382 46 228 5.7E-17 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS06255 c14c5664d54cb5e9ace659883443f689 451 Gene3D G3DSA:3.40.50.300 18 225 3.3E-64 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS06255 c14c5664d54cb5e9ace659883443f689 451 Pfam PF00005 ABC transporter 37 176 1.0E-34 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS06255 c14c5664d54cb5e9ace659883443f689 451 Pfam PF09821 C-terminal AAA-associated domain 320 437 4.3E-41 T 19-04-2016 IPR018632 C-terminal AAA-associated domain APA12_RS06255 c14c5664d54cb5e9ace659883443f689 451 PANTHER PTHR24220:SF589 278 308 1.3E-113 T 19-04-2016 APA12_RS06255 c14c5664d54cb5e9ace659883443f689 451 PANTHER PTHR24220:SF589 18 258 1.3E-113 T 19-04-2016 APA12_RS06255 c14c5664d54cb5e9ace659883443f689 451 PANTHER PTHR24220:SF589 329 438 1.3E-113 T 19-04-2016 APA12_RS06730 64de4dab48ea205c4572b513d5084156 482 Pfam PF02321 Outer membrane efflux protein 66 269 4.6E-17 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APA12_RS06730 64de4dab48ea205c4572b513d5084156 482 Pfam PF02321 Outer membrane efflux protein 304 481 4.2E-22 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APA12_RS06730 64de4dab48ea205c4572b513d5084156 482 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 16 482 3.0E-74 T 19-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 APA12_RS06730 64de4dab48ea205c4572b513d5084156 482 SUPERFAMILY SSF56954 9 482 1.96E-78 T 19-04-2016 APA12_RS06730 64de4dab48ea205c4572b513d5084156 482 PANTHER PTHR30203:SF3 12 477 9.1E-73 T 19-04-2016 APA12_RS06730 64de4dab48ea205c4572b513d5084156 482 PANTHER PTHR30203 12 477 9.1E-73 T 19-04-2016 APA12_RS06730 64de4dab48ea205c4572b513d5084156 482 Gene3D G3DSA:1.20.1600.10 57 482 3.3E-79 T 19-04-2016 APA12_RS03110 26ed33216dc45cc217ab2d5bafee1b2f 270 PANTHER PTHR10953 3 251 1.1E-87 T 19-04-2016 APA12_RS03110 26ed33216dc45cc217ab2d5bafee1b2f 270 SUPERFAMILY SSF69572 3 252 1.06E-85 T 19-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 APA12_RS03110 26ed33216dc45cc217ab2d5bafee1b2f 270 Gene3D G3DSA:3.40.50.720 5 251 1.2E-71 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS03110 26ed33216dc45cc217ab2d5bafee1b2f 270 PANTHER PTHR10953:SF153 3 251 1.1E-87 T 19-04-2016 APA12_RS03110 26ed33216dc45cc217ab2d5bafee1b2f 270 Pfam PF00899 ThiF family 13 248 2.0E-61 T 19-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 APA12_RS07070 da0ed297c1f282de23c204ca9089c10f 2008 SUPERFAMILY SSF52980 1652 1768 2.41E-18 T 19-04-2016 IPR011335 Restriction endonuclease type II-like APA12_RS07070 da0ed297c1f282de23c204ca9089c10f 2008 Gene3D G3DSA:3.40.960.10 1719 1772 8.0E-4 T 19-04-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 APA12_RS07070 da0ed297c1f282de23c204ca9089c10f 2008 Pfam PF13086 AAA domain 1355 1396 6.1E-8 T 19-04-2016 APA12_RS07070 da0ed297c1f282de23c204ca9089c10f 2008 Pfam PF13087 AAA domain 1429 1615 9.3E-18 T 19-04-2016 APA12_RS07070 da0ed297c1f282de23c204ca9089c10f 2008 Pfam PF13195 Protein of unknown function (DUF4011) 408 586 3.5E-41 T 19-04-2016 IPR025103 Protein of unknown function DUF4011 APA12_RS07070 da0ed297c1f282de23c204ca9089c10f 2008 PANTHER PTHR10887:SF340 12 37 6.6E-63 T 19-04-2016 APA12_RS07070 da0ed297c1f282de23c204ca9089c10f 2008 PANTHER PTHR10887:SF340 460 676 6.6E-63 T 19-04-2016 APA12_RS07070 da0ed297c1f282de23c204ca9089c10f 2008 PANTHER PTHR10887:SF340 702 794 6.6E-63 T 19-04-2016 APA12_RS07070 da0ed297c1f282de23c204ca9089c10f 2008 PANTHER PTHR10887:SF340 1275 1617 6.6E-63 T 19-04-2016 APA12_RS07070 da0ed297c1f282de23c204ca9089c10f 2008 Pfam PF11784 Protein of unknown function (DUF3320) 1850 1898 3.7E-13 T 19-04-2016 IPR021754 Protein of unknown function DUF3320 APA12_RS07070 da0ed297c1f282de23c204ca9089c10f 2008 PANTHER PTHR10887 12 37 6.6E-63 T 19-04-2016 APA12_RS07070 da0ed297c1f282de23c204ca9089c10f 2008 PANTHER PTHR10887 460 676 6.6E-63 T 19-04-2016 APA12_RS07070 da0ed297c1f282de23c204ca9089c10f 2008 PANTHER PTHR10887 702 794 6.6E-63 T 19-04-2016 APA12_RS07070 da0ed297c1f282de23c204ca9089c10f 2008 PANTHER PTHR10887 1275 1617 6.6E-63 T 19-04-2016 APA12_RS07070 da0ed297c1f282de23c204ca9089c10f 2008 SUPERFAMILY SSF52540 1429 1676 1.74E-43 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS07070 da0ed297c1f282de23c204ca9089c10f 2008 SUPERFAMILY SSF52540 943 967 1.74E-43 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS07070 da0ed297c1f282de23c204ca9089c10f 2008 SUPERFAMILY SSF52540 704 771 1.74E-43 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS07070 da0ed297c1f282de23c204ca9089c10f 2008 SUPERFAMILY SSF52540 1337 1394 1.74E-43 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS07070 da0ed297c1f282de23c204ca9089c10f 2008 Pfam PF13245 Part of AAA domain 712 767 6.2E-9 T 19-04-2016 APA12_RS07070 da0ed297c1f282de23c204ca9089c10f 2008 Gene3D G3DSA:3.40.50.300 1357 1463 1.8E-44 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS07070 da0ed297c1f282de23c204ca9089c10f 2008 Gene3D G3DSA:3.40.50.300 698 815 1.8E-44 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS10890 761404789dc9773c1063689f4f5b75cb 206 Gene3D G3DSA:3.40.30.10 12 201 1.3E-35 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS10890 761404789dc9773c1063689f4f5b75cb 206 PANTHER PTHR12151 43 201 2.5E-23 T 19-04-2016 IPR003782 Copper chaperone SCO1/SenC APA12_RS10890 761404789dc9773c1063689f4f5b75cb 206 Pfam PF02630 SCO1/SenC 18 179 1.6E-15 T 19-04-2016 IPR003782 Copper chaperone SCO1/SenC APA12_RS10890 761404789dc9773c1063689f4f5b75cb 206 SUPERFAMILY SSF52833 42 201 4.75E-28 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS09580 2ff9192af359e87e20cd305031cfe740 490 SUPERFAMILY SSF51735 5 191 2.76E-51 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS09580 2ff9192af359e87e20cd305031cfe740 490 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 144 157 6.5E-46 T 19-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APA12_RS09580 2ff9192af359e87e20cd305031cfe740 490 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 238 254 6.5E-46 T 19-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APA12_RS09580 2ff9192af359e87e20cd305031cfe740 490 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 220 237 6.5E-46 T 19-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APA12_RS09580 2ff9192af359e87e20cd305031cfe740 490 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 329 355 6.5E-46 T 19-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APA12_RS09580 2ff9192af359e87e20cd305031cfe740 490 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 168 196 6.5E-46 T 19-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APA12_RS09580 2ff9192af359e87e20cd305031cfe740 490 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 13 188 5.6E-54 T 19-04-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APA12_RS09580 2ff9192af359e87e20cd305031cfe740 490 Gene3D G3DSA:3.40.50.720 7 187 8.5E-58 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS09580 2ff9192af359e87e20cd305031cfe740 490 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 9 486 77.681 T 19-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APA12_RS09580 2ff9192af359e87e20cd305031cfe740 490 PANTHER PTHR23429:SF0 1 487 1.8E-185 T 19-04-2016 APA12_RS09580 2ff9192af359e87e20cd305031cfe740 490 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 190 485 2.8E-106 T 19-04-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APA12_RS09580 2ff9192af359e87e20cd305031cfe740 490 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 10 486 3.5E-163 T 19-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APA12_RS09580 2ff9192af359e87e20cd305031cfe740 490 SUPERFAMILY SSF55347 178 486 3.92E-104 T 19-04-2016 APA12_RS09580 2ff9192af359e87e20cd305031cfe740 490 PIRSF PIRSF000110 1 488 5.0E-162 T 19-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APA12_RS09580 2ff9192af359e87e20cd305031cfe740 490 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 178 184 - T 19-04-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APA12_RS09580 2ff9192af359e87e20cd305031cfe740 490 PANTHER PTHR23429 1 487 1.8E-185 T 19-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APA12_RS09580 2ff9192af359e87e20cd305031cfe740 490 Gene3D G3DSA:3.30.360.10 188 485 3.7E-113 T 19-04-2016 APA12_RS13410 d0fb5794ae4c40ef7809995bf77c0c36 1031 Gene3D G3DSA:3.90.550.10 786 1004 1.0E-39 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS13410 d0fb5794ae4c40ef7809995bf77c0c36 1031 SUPERFAMILY SSF53756 448 733 1.57E-21 T 19-04-2016 APA12_RS13410 d0fb5794ae4c40ef7809995bf77c0c36 1031 Pfam PF00535 Glycosyl transferase family 2 787 903 3.8E-22 T 19-04-2016 IPR001173 Glycosyltransferase 2-like APA12_RS13410 d0fb5794ae4c40ef7809995bf77c0c36 1031 SUPERFAMILY SSF53448 786 1003 6.09E-37 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS13410 d0fb5794ae4c40ef7809995bf77c0c36 1031 PANTHER PTHR22916 731 1018 1.2E-35 T 19-04-2016 APA12_RS13410 d0fb5794ae4c40ef7809995bf77c0c36 1031 Gene3D G3DSA:3.40.50.2000 542 719 3.8E-5 T 19-04-2016 APA12_RS13410 d0fb5794ae4c40ef7809995bf77c0c36 1031 Pfam PF13524 Glycosyl transferases group 1 656 726 4.7E-9 T 19-04-2016 APA12_RS12870 9d7e1cf0b1aec922315c6c68f13ea795 484 PANTHER PTHR11659 12 483 3.1E-256 T 19-04-2016 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016884 APA12_RS12870 9d7e1cf0b1aec922315c6c68f13ea795 484 SMART SM00845 336 482 3.2E-77 T 19-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 APA12_RS12870 9d7e1cf0b1aec922315c6c68f13ea795 484 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 11 483 37.051 T 19-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 APA12_RS12870 9d7e1cf0b1aec922315c6c68f13ea795 484 Pfam PF02637 GatB domain 337 482 4.0E-49 T 19-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 APA12_RS12870 9d7e1cf0b1aec922315c6c68f13ea795 484 Pfam PF02934 GatB/GatE catalytic domain 14 296 1.2E-113 T 19-04-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 APA12_RS12870 9d7e1cf0b1aec922315c6c68f13ea795 484 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 12 482 5.0E-166 T 19-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 APA12_RS12870 9d7e1cf0b1aec922315c6c68f13ea795 484 PANTHER PTHR11659:SF0 12 483 3.1E-256 T 19-04-2016 APA12_RS12870 9d7e1cf0b1aec922315c6c68f13ea795 484 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 153 167 - T 19-04-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 APA12_RS12870 9d7e1cf0b1aec922315c6c68f13ea795 484 SUPERFAMILY SSF89095 305 410 2.01E-32 T 19-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 APA12_RS12870 9d7e1cf0b1aec922315c6c68f13ea795 484 SUPERFAMILY SSF55931 13 304 1.96E-115 T 19-04-2016 APA12_RS10090 9eed2ce7ddae2b7e0b105c05c07f26d5 997 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 67 571 1.5E-154 T 19-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 APA12_RS10090 9eed2ce7ddae2b7e0b105c05c07f26d5 997 Hamap MF_00970 Ribonuclease E [rne]. 55 992 29.937 T 19-04-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 APA12_RS10090 9eed2ce7ddae2b7e0b105c05c07f26d5 997 Pfam PF10150 Ribonuclease E/G family 266 537 4.4E-94 T 19-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 APA12_RS10090 9eed2ce7ddae2b7e0b105c05c07f26d5 997 SMART SM00316 91 264 0.005 T 19-04-2016 IPR022967 RNA-binding domain, S1 APA12_RS10090 9eed2ce7ddae2b7e0b105c05c07f26d5 997 PANTHER PTHR30001 54 176 9.5E-239 T 19-04-2016 APA12_RS10090 9eed2ce7ddae2b7e0b105c05c07f26d5 997 PANTHER PTHR30001 211 976 9.5E-239 T 19-04-2016 APA12_RS10090 9eed2ce7ddae2b7e0b105c05c07f26d5 997 SUPERFAMILY SSF50249 226 270 1.17E-14 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS10090 9eed2ce7ddae2b7e0b105c05c07f26d5 997 SUPERFAMILY SSF50249 93 134 1.17E-14 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS10090 9eed2ce7ddae2b7e0b105c05c07f26d5 997 PANTHER PTHR30001:SF1 54 176 9.5E-239 T 19-04-2016 APA12_RS10090 9eed2ce7ddae2b7e0b105c05c07f26d5 997 PANTHER PTHR30001:SF1 211 976 9.5E-239 T 19-04-2016 APA12_RS10090 9eed2ce7ddae2b7e0b105c05c07f26d5 997 Gene3D G3DSA:2.40.50.140 84 136 2.1E-39 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS10090 9eed2ce7ddae2b7e0b105c05c07f26d5 997 Gene3D G3DSA:2.40.50.140 228 270 2.1E-39 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS11055 99d571da194866224170c3b9d7e929eb 323 Gene3D G3DSA:3.40.718.10 2 320 1.2E-125 T 19-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APA12_RS11055 99d571da194866224170c3b9d7e929eb 323 PANTHER PTHR30004 1 321 1.7E-135 T 19-04-2016 APA12_RS11055 99d571da194866224170c3b9d7e929eb 323 PANTHER PTHR30004:SF6 1 321 1.7E-135 T 19-04-2016 APA12_RS11055 99d571da194866224170c3b9d7e929eb 323 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 2 316 3.1E-122 T 19-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 APA12_RS11055 99d571da194866224170c3b9d7e929eb 323 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 31 312 5.0E-106 T 19-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 APA12_RS11055 99d571da194866224170c3b9d7e929eb 323 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 1 316 33.957 T 19-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 APA12_RS11055 99d571da194866224170c3b9d7e929eb 323 SUPERFAMILY SSF53659 2 319 7.0E-109 T 19-04-2016 APA12_RS06005 78d5983331f0ba72f1cbdbaa22b841b6 172 Pfam PF00034 Cytochrome c 62 159 2.1E-8 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS06005 78d5983331f0ba72f1cbdbaa22b841b6 172 SUPERFAMILY SSF46626 57 160 3.69E-25 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS06005 78d5983331f0ba72f1cbdbaa22b841b6 172 PANTHER PTHR11961:SF6 51 169 1.3E-20 T 19-04-2016 APA12_RS06005 78d5983331f0ba72f1cbdbaa22b841b6 172 PANTHER PTHR11961 51 169 1.3E-20 T 19-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 APA12_RS06005 78d5983331f0ba72f1cbdbaa22b841b6 172 Gene3D G3DSA:1.10.760.10 57 159 2.8E-27 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS06005 78d5983331f0ba72f1cbdbaa22b841b6 172 PRINTS PR00604 Class IA and IB cytochrome C signature 83 98 1.4E-12 T 19-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 APA12_RS06005 78d5983331f0ba72f1cbdbaa22b841b6 172 PRINTS PR00604 Class IA and IB cytochrome C signature 70 77 1.4E-12 T 19-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 APA12_RS06005 78d5983331f0ba72f1cbdbaa22b841b6 172 PRINTS PR00604 Class IA and IB cytochrome C signature 99 109 1.4E-12 T 19-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 APA12_RS06005 78d5983331f0ba72f1cbdbaa22b841b6 172 PRINTS PR00604 Class IA and IB cytochrome C signature 114 130 1.4E-12 T 19-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 APA12_RS06005 78d5983331f0ba72f1cbdbaa22b841b6 172 PRINTS PR00604 Class IA and IB cytochrome C signature 150 158 1.4E-12 T 19-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 APA12_RS06005 78d5983331f0ba72f1cbdbaa22b841b6 172 PRINTS PR00604 Class IA and IB cytochrome C signature 133 143 1.4E-12 T 19-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 APA12_RS08850 7f8ecef267da9cb6c3be6b28b068c107 463 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 353 362 - T 19-04-2016 IPR025944 Sigma-54 interaction domain, conserved site APA12_RS08850 7f8ecef267da9cb6c3be6b28b068c107 463 SMART SM00382 162 303 1.2E-14 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS08850 7f8ecef267da9cb6c3be6b28b068c107 463 Gene3D G3DSA:1.10.10.60 408 454 2.8E-7 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS08850 7f8ecef267da9cb6c3be6b28b068c107 463 SUPERFAMILY SSF52172 4 186 1.85E-42 T 19-04-2016 IPR011006 CheY-like superfamily APA12_RS08850 7f8ecef267da9cb6c3be6b28b068c107 463 PANTHER PTHR32071 1 460 8.8E-198 T 19-04-2016 APA12_RS08850 7f8ecef267da9cb6c3be6b28b068c107 463 SUPERFAMILY SSF46689 353 455 7.17E-13 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS08850 7f8ecef267da9cb6c3be6b28b068c107 463 Gene3D G3DSA:3.40.50.300 139 312 6.5E-54 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS08850 7f8ecef267da9cb6c3be6b28b068c107 463 Pfam PF00158 Sigma-54 interaction domain 143 306 2.2E-52 T 19-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 APA12_RS08850 7f8ecef267da9cb6c3be6b28b068c107 463 Gene3D G3DSA:1.10.8.60 313 391 5.5E-25 T 19-04-2016 APA12_RS08850 7f8ecef267da9cb6c3be6b28b068c107 463 Pfam PF02954 Bacterial regulatory protein, Fis family 414 453 3.5E-9 T 19-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APA12_RS08850 7f8ecef267da9cb6c3be6b28b068c107 463 Pfam PF00072 Response regulator receiver domain 5 116 7.5E-29 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS08850 7f8ecef267da9cb6c3be6b28b068c107 463 SUPERFAMILY SSF52540 141 374 4.15E-63 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS08850 7f8ecef267da9cb6c3be6b28b068c107 463 SMART SM00448 3 116 4.6E-35 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS08850 7f8ecef267da9cb6c3be6b28b068c107 463 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 226 241 - T 19-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APA12_RS08850 7f8ecef267da9cb6c3be6b28b068c107 463 PANTHER PTHR32071:SF17 1 460 8.8E-198 T 19-04-2016 APA12_RS08850 7f8ecef267da9cb6c3be6b28b068c107 463 Gene3D G3DSA:3.40.50.2300 3 129 4.2E-38 T 19-04-2016 APA12_RS04105 7fefe60035518b3757d09c8348af9720 468 Pfam PF00171 Aldehyde dehydrogenase family 2 436 1.7E-97 T 19-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APA12_RS04105 7fefe60035518b3757d09c8348af9720 468 PANTHER PTHR11699 1 468 1.1E-169 T 19-04-2016 APA12_RS04105 7fefe60035518b3757d09c8348af9720 468 Gene3D G3DSA:3.40.605.10 2 230 4.7E-56 T 19-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APA12_RS04105 7fefe60035518b3757d09c8348af9720 468 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 243 254 - T 19-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 APA12_RS04105 7fefe60035518b3757d09c8348af9720 468 PIRSF PIRSF036492 2 468 5.7E-165 T 19-04-2016 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 APA12_RS04105 7fefe60035518b3757d09c8348af9720 468 Gene3D G3DSA:3.40.309.10 231 419 1.3E-56 T 19-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APA12_RS04105 7fefe60035518b3757d09c8348af9720 468 PANTHER PTHR11699:SF15 1 468 1.1E-169 T 19-04-2016 APA12_RS04105 7fefe60035518b3757d09c8348af9720 468 SUPERFAMILY SSF53720 3 440 9.82E-121 T 19-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APA12_RS04105 7fefe60035518b3757d09c8348af9720 468 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 215 222 - T 19-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 APA12_RS05965 84b15b156f617d6cff967d39532633ff 499 SUPERFAMILY SSF50610 359 422 5.75E-13 T 19-04-2016 IPR009004 Transposase, Mu, C-terminal APA12_RS05965 84b15b156f617d6cff967d39532633ff 499 Pfam PF09299 Mu transposase, C-terminal 362 420 5.5E-21 T 19-04-2016 IPR015378 Transposase-like, Mu, C-terminal APA12_RS05965 84b15b156f617d6cff967d39532633ff 499 Gene3D G3DSA:2.30.30.130 363 421 8.8E-9 T 19-04-2016 IPR009004 Transposase, Mu, C-terminal APA12_RS05965 84b15b156f617d6cff967d39532633ff 499 Pfam PF00665 Integrase core domain 162 290 1.2E-20 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APA12_RS05965 84b15b156f617d6cff967d39532633ff 499 Gene3D G3DSA:1.10.10.60 79 150 5.2E-15 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS05965 84b15b156f617d6cff967d39532633ff 499 Pfam PF13384 Homeodomain-like domain 23 70 9.0E-6 T 19-04-2016 APA12_RS05965 84b15b156f617d6cff967d39532633ff 499 SUPERFAMILY SSF53098 159 341 1.77E-25 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS05965 84b15b156f617d6cff967d39532633ff 499 Gene3D G3DSA:3.30.420.10 158 340 1.4E-33 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS05965 84b15b156f617d6cff967d39532633ff 499 SUPERFAMILY SSF46689 24 133 6.27E-7 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS12500 91f6a4d0848a96beec5a261288d99e7c 74 Pfam PF00137 ATP synthase subunit C 9 71 2.3E-11 T 19-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 APA12_RS12500 91f6a4d0848a96beec5a261288d99e7c 74 ProSitePatterns PS00605 ATP synthase c subunit signature. 37 58 - T 19-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site APA12_RS12500 91f6a4d0848a96beec5a261288d99e7c 74 Hamap MF_01396 ATP synthase subunit c [atpH]. 7 74 14.465 T 19-04-2016 APA12_RS12500 91f6a4d0848a96beec5a261288d99e7c 74 Gene3D G3DSA:1.20.20.10 9 73 3.4E-20 T 19-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 APA12_RS12500 91f6a4d0848a96beec5a261288d99e7c 74 SUPERFAMILY SSF81333 5 73 2.09E-16 T 19-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 APA12_RS12500 91f6a4d0848a96beec5a261288d99e7c 74 PRINTS PR00124 ATP synthase C subunit signature 30 45 1.7E-27 T 19-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 APA12_RS12500 91f6a4d0848a96beec5a261288d99e7c 74 PRINTS PR00124 ATP synthase C subunit signature 9 28 1.7E-27 T 19-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 APA12_RS12500 91f6a4d0848a96beec5a261288d99e7c 74 PRINTS PR00124 ATP synthase C subunit signature 47 72 1.7E-27 T 19-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 APA12_RS12500 91f6a4d0848a96beec5a261288d99e7c 74 PANTHER PTHR10031 3 74 1.3E-20 T 19-04-2016 APA12_RS02785 77556bc1f5201a541f21b05cb933c26c 157 Gene3D G3DSA:1.10.10.10 1 142 1.2E-55 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS02785 77556bc1f5201a541f21b05cb933c26c 157 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 136 5.6E-34 T 19-04-2016 IPR000944 Transcription regulator Rrf2-type APA12_RS02785 77556bc1f5201a541f21b05cb933c26c 157 PANTHER PTHR33221 2 156 8.0E-53 T 19-04-2016 APA12_RS02785 77556bc1f5201a541f21b05cb933c26c 157 SUPERFAMILY SSF46785 2 139 1.15E-36 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS02785 77556bc1f5201a541f21b05cb933c26c 157 PANTHER PTHR33221:SF4 2 156 8.0E-53 T 19-04-2016 APA12_RS02785 77556bc1f5201a541f21b05cb933c26c 157 Pfam PF02082 Transcriptional regulator 1 81 7.9E-25 T 19-04-2016 IPR000944 Transcription regulator Rrf2-type APA12_RS07205 0819bc7f64b883839419b1153ce8242f 584 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 70 582 1.6E-99 T 19-04-2016 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 APA12_RS07205 0819bc7f64b883839419b1153ce8242f 584 Pfam PF04851 Type III restriction enzyme, res subunit 312 482 3.7E-19 T 19-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 APA12_RS07205 0819bc7f64b883839419b1153ce8242f 584 PANTHER PTHR30195:SF15 263 581 2.7E-148 T 19-04-2016 APA12_RS07205 0819bc7f64b883839419b1153ce8242f 584 PANTHER PTHR30195:SF15 1 229 2.7E-148 T 19-04-2016 APA12_RS07205 0819bc7f64b883839419b1153ce8242f 584 Gene3D G3DSA:3.40.50.300 303 497 5.9E-16 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS07205 0819bc7f64b883839419b1153ce8242f 584 SMART SM00487 309 519 3.1E-8 T 19-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APA12_RS07205 0819bc7f64b883839419b1153ce8242f 584 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 7 224 4.2E-39 T 19-04-2016 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 APA12_RS07205 0819bc7f64b883839419b1153ce8242f 584 PANTHER PTHR30195 263 581 2.7E-148 T 19-04-2016 APA12_RS07205 0819bc7f64b883839419b1153ce8242f 584 PANTHER PTHR30195 1 229 2.7E-148 T 19-04-2016 APA12_RS07205 0819bc7f64b883839419b1153ce8242f 584 SUPERFAMILY SSF52540 277 537 2.13E-22 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS09195 4dee1b99d299c96b638fa14cc4e25181 354 PANTHER PTHR33627:SF1 5 347 3.1E-39 T 19-04-2016 APA12_RS09195 4dee1b99d299c96b638fa14cc4e25181 354 SUPERFAMILY SSF53098 71 347 3.87E-16 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS09195 4dee1b99d299c96b638fa14cc4e25181 354 Pfam PF13546 DDE superfamily endonuclease 73 237 4.3E-44 T 19-04-2016 APA12_RS09195 4dee1b99d299c96b638fa14cc4e25181 354 PANTHER PTHR33627 5 347 3.1E-39 T 19-04-2016 APA12_RS05245 0af1eb0b4aae041eed28a369902abf5e 205 PANTHER PTHR11831:SF4 1 205 5.4E-74 T 19-04-2016 APA12_RS05245 0af1eb0b4aae041eed28a369902abf5e 205 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 5 205 8.3E-75 T 19-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 APA12_RS05245 0af1eb0b4aae041eed28a369902abf5e 205 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 6 93 2.6E-22 T 19-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 APA12_RS05245 0af1eb0b4aae041eed28a369902abf5e 205 ProSitePatterns PS00632 Ribosomal protein S4 signature. 92 116 - T 19-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 APA12_RS05245 0af1eb0b4aae041eed28a369902abf5e 205 Gene3D G3DSA:3.10.290.10 97 194 2.4E-30 T 19-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APA12_RS05245 0af1eb0b4aae041eed28a369902abf5e 205 PANTHER PTHR11831 1 205 5.4E-74 T 19-04-2016 IPR022801 Ribosomal protein S4/S9 APA12_RS05245 0af1eb0b4aae041eed28a369902abf5e 205 Gene3D G3DSA:1.10.1050.10 1 96 4.7E-35 T 19-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 APA12_RS05245 0af1eb0b4aae041eed28a369902abf5e 205 SMART SM00363 94 158 8.0E-18 T 19-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APA12_RS05245 0af1eb0b4aae041eed28a369902abf5e 205 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 205 32.562 T 19-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 APA12_RS05245 0af1eb0b4aae041eed28a369902abf5e 205 SMART SM01390 3 93 6.5E-40 T 19-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 APA12_RS05245 0af1eb0b4aae041eed28a369902abf5e 205 Pfam PF01479 S4 domain 94 141 2.6E-17 T 19-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APA12_RS05245 0af1eb0b4aae041eed28a369902abf5e 205 SUPERFAMILY SSF55174 4 205 3.14E-63 T 19-04-2016 APA12_RS11320 7a7ae1577b2e997180764b739ed0ccb2 286 Gene3D G3DSA:3.30.1150.10 166 282 2.3E-24 T 19-04-2016 APA12_RS11320 7a7ae1577b2e997180764b739ed0ccb2 286 PANTHER PTHR33446 58 282 4.3E-14 T 19-04-2016 APA12_RS11320 7a7ae1577b2e997180764b739ed0ccb2 286 PANTHER PTHR33446:SF2 58 282 4.3E-14 T 19-04-2016 APA12_RS11320 7a7ae1577b2e997180764b739ed0ccb2 286 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 203 280 2.5E-16 T 19-04-2016 IPR006260 TonB, C-terminal GO:0006810 APA12_RS11320 7a7ae1577b2e997180764b739ed0ccb2 286 PRINTS PR01217 Proline rich extensin signature 57 69 1.7E-9 T 19-04-2016 APA12_RS11320 7a7ae1577b2e997180764b739ed0ccb2 286 PRINTS PR01217 Proline rich extensin signature 143 168 1.7E-9 T 19-04-2016 APA12_RS11320 7a7ae1577b2e997180764b739ed0ccb2 286 PRINTS PR01217 Proline rich extensin signature 72 93 1.7E-9 T 19-04-2016 APA12_RS11320 7a7ae1577b2e997180764b739ed0ccb2 286 PRINTS PR01217 Proline rich extensin signature 93 109 1.7E-9 T 19-04-2016 APA12_RS11320 7a7ae1577b2e997180764b739ed0ccb2 286 PRINTS PR01217 Proline rich extensin signature 112 129 1.7E-9 T 19-04-2016 APA12_RS11320 7a7ae1577b2e997180764b739ed0ccb2 286 SUPERFAMILY SSF74653 179 282 2.75E-16 T 19-04-2016 APA12_RS11320 7a7ae1577b2e997180764b739ed0ccb2 286 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 204 281 1.2E-19 T 19-04-2016 IPR006260 TonB, C-terminal GO:0006810 APA12_RS09695 b200545d40b75546f47120959520447d 891 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 528 879 2.0E-89 T 19-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 APA12_RS09695 b200545d40b75546f47120959520447d 891 Gene3D G3DSA:1.10.189.10 354 411 2.2E-28 T 19-04-2016 APA12_RS09695 b200545d40b75546f47120959520447d 891 SUPERFAMILY SSF51621 521 881 1.11E-130 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APA12_RS09695 b200545d40b75546f47120959520447d 891 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 3 881 0.0 T 19-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APA12_RS09695 b200545d40b75546f47120959520447d 891 PANTHER PTHR22931:SF9 1 889 0.0 T 19-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APA12_RS09695 b200545d40b75546f47120959520447d 891 PANTHER PTHR22931 1 889 0.0 T 19-04-2016 APA12_RS09695 b200545d40b75546f47120959520447d 891 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 460 471 - T 19-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 APA12_RS09695 b200545d40b75546f47120959520447d 891 Gene3D G3DSA:3.30.1490.20 3 114 3.4E-58 T 19-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APA12_RS09695 b200545d40b75546f47120959520447d 891 Gene3D G3DSA:3.30.1490.20 203 246 3.4E-58 T 19-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APA12_RS09695 b200545d40b75546f47120959520447d 891 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 771 789 - T 19-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 APA12_RS09695 b200545d40b75546f47120959520447d 891 Pfam PF00391 PEP-utilising enzyme, mobile domain 432 513 2.7E-25 T 19-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APA12_RS09695 b200545d40b75546f47120959520447d 891 Gene3D G3DSA:3.30.470.20 247 353 5.7E-37 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APA12_RS09695 b200545d40b75546f47120959520447d 891 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 313 368 1.0E-10 T 19-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 APA12_RS09695 b200545d40b75546f47120959520447d 891 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 21 297 3.1E-51 T 19-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 APA12_RS09695 b200545d40b75546f47120959520447d 891 SUPERFAMILY SSF56059 1 390 6.95E-145 T 19-04-2016 APA12_RS09695 b200545d40b75546f47120959520447d 891 Gene3D G3DSA:3.20.20.60 542 882 7.2E-141 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APA12_RS09695 b200545d40b75546f47120959520447d 891 SUPERFAMILY SSF52009 399 522 1.15E-36 T 19-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APA12_RS09695 b200545d40b75546f47120959520447d 891 PIRSF PIRSF000853 1 889 0.0 T 19-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APA12_RS09695 b200545d40b75546f47120959520447d 891 Gene3D G3DSA:1.20.80.30 115 201 1.1E-34 T 19-04-2016 APA12_RS09695 b200545d40b75546f47120959520447d 891 Gene3D G3DSA:3.50.30.10 412 516 3.0E-39 T 19-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APA12_RS10250 62f41a865081bf2e5ffdd3c59c405522 291 PANTHER PTHR30349 33 283 6.2E-50 T 19-04-2016 APA12_RS10250 62f41a865081bf2e5ffdd3c59c405522 291 Gene3D G3DSA:1.10.150.130 32 104 1.7E-10 T 19-04-2016 IPR023109 Integrase/recombinase, N-terminal APA12_RS10250 62f41a865081bf2e5ffdd3c59c405522 291 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 33 93 3.1E-7 T 19-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 APA12_RS10250 62f41a865081bf2e5ffdd3c59c405522 291 Gene3D G3DSA:1.10.443.10 122 284 1.1E-44 T 19-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APA12_RS10250 62f41a865081bf2e5ffdd3c59c405522 291 PANTHER PTHR30349:SF5 33 283 6.2E-50 T 19-04-2016 APA12_RS10250 62f41a865081bf2e5ffdd3c59c405522 291 Pfam PF00589 Phage integrase family 124 281 4.0E-29 T 19-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APA12_RS10250 62f41a865081bf2e5ffdd3c59c405522 291 SUPERFAMILY SSF56349 31 282 1.0E-49 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APA12_RS13495 055904156c21651b56349dce3982b0fb 198 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 7 190 24.68 T 19-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 APA12_RS13495 055904156c21651b56349dce3982b0fb 198 PIRSF PIRSF003078 3 194 1.6E-43 T 19-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 APA12_RS13495 055904156c21651b56349dce3982b0fb 198 PANTHER PTHR31760:SF0 7 174 7.3E-42 T 19-04-2016 APA12_RS13495 055904156c21651b56349dce3982b0fb 198 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 19 174 5.2E-41 T 19-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 APA12_RS13495 055904156c21651b56349dce3982b0fb 198 SUPERFAMILY SSF53335 8 174 7.86E-31 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS13495 055904156c21651b56349dce3982b0fb 198 Pfam PF02527 rRNA small subunit methyltransferase G 15 175 5.9E-43 T 19-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 APA12_RS13495 055904156c21651b56349dce3982b0fb 198 Gene3D G3DSA:3.40.50.150 8 185 2.1E-49 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS13495 055904156c21651b56349dce3982b0fb 198 PANTHER PTHR31760 7 174 7.3E-42 T 19-04-2016 APA12_RS08760 704a5b27872e782848c00a79cca4d20a 465 SUPERFAMILY SSF50998 72 457 2.35E-63 T 19-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APA12_RS08760 704a5b27872e782848c00a79cca4d20a 465 Gene3D G3DSA:2.140.10.10 71 464 4.5E-63 T 19-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain APA12_RS08760 704a5b27872e782848c00a79cca4d20a 465 Gene3D G3DSA:2.140.10.10 24 33 4.5E-63 T 19-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain APA12_RS08760 704a5b27872e782848c00a79cca4d20a 465 PANTHER PTHR32303 133 390 7.8E-18 T 19-04-2016 APA12_RS08760 704a5b27872e782848c00a79cca4d20a 465 Pfam PF13360 PQQ-like domain 146 382 4.6E-45 T 19-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat APA12_RS08760 704a5b27872e782848c00a79cca4d20a 465 PANTHER PTHR32303:SF8 133 390 7.8E-18 T 19-04-2016 APA12_RS08760 704a5b27872e782848c00a79cca4d20a 465 SMART SM00564 264 295 62.0 T 19-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APA12_RS08760 704a5b27872e782848c00a79cca4d20a 465 SMART SM00564 315 346 1.1 T 19-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APA12_RS08760 704a5b27872e782848c00a79cca4d20a 465 SMART SM00564 353 384 510.0 T 19-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APA12_RS08760 704a5b27872e782848c00a79cca4d20a 465 SMART SM00564 219 250 1.2E-5 T 19-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APA12_RS08760 704a5b27872e782848c00a79cca4d20a 465 SMART SM00564 179 210 6.4 T 19-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APA12_RS00335 e8c07eead777ace18becd6d9837973dd 322 PANTHER PTHR11075 1 317 1.7E-157 T 19-04-2016 APA12_RS00335 e8c07eead777ace18becd6d9837973dd 322 PANTHER PTHR11075:SF6 1 317 1.7E-157 T 19-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 APA12_RS00335 e8c07eead777ace18becd6d9837973dd 322 Pfam PF00472 RF-1 domain 173 282 5.5E-41 T 19-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APA12_RS00335 e8c07eead777ace18becd6d9837973dd 322 Pfam PF03462 PCRF domain 2 164 5.5E-50 T 19-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 APA12_RS00335 e8c07eead777ace18becd6d9837973dd 322 Gene3D G3DSA:1.20.58.410 1 58 2.9E-6 T 19-04-2016 APA12_RS00335 e8c07eead777ace18becd6d9837973dd 322 SMART SM00937 29 139 3.4E-54 T 19-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 APA12_RS00335 e8c07eead777ace18becd6d9837973dd 322 Gene3D G3DSA:3.30.160.20 172 250 3.2E-38 T 19-04-2016 IPR014720 Double-stranded RNA-binding domain APA12_RS00335 e8c07eead777ace18becd6d9837973dd 322 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 189 205 - T 19-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APA12_RS00335 e8c07eead777ace18becd6d9837973dd 322 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 309 9.3E-143 T 19-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 APA12_RS00335 e8c07eead777ace18becd6d9837973dd 322 SUPERFAMILY SSF75620 2 309 1.83E-124 T 19-04-2016 APA12_RS02530 2c5806dfa212bf9cd4ca55ef810f1362 217 PANTHER PTHR30086 1 217 6.0E-45 T 19-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APA12_RS02530 2c5806dfa212bf9cd4ca55ef810f1362 217 Pfam PF01810 LysE type translocator 15 214 3.4E-33 T 19-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APA12_RS02530 2c5806dfa212bf9cd4ca55ef810f1362 217 PIRSF PIRSF006324 1 217 8.4E-59 T 19-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APA12_RS11970 0842e2ed618b3b66c5fc482a44060270 143 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 3.1E-8 T 19-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APA12_RS11970 0842e2ed618b3b66c5fc482a44060270 143 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 3.1E-8 T 19-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APA12_RS11970 0842e2ed618b3b66c5fc482a44060270 143 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 16 31 3.1E-8 T 19-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APA12_RS11970 0842e2ed618b3b66c5fc482a44060270 143 PANTHER PTHR33154 2 105 6.9E-18 T 19-04-2016 APA12_RS11970 0842e2ed618b3b66c5fc482a44060270 143 SMART SM00418 14 97 9.0E-16 T 19-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APA12_RS11970 0842e2ed618b3b66c5fc482a44060270 143 Pfam PF01022 Bacterial regulatory protein, arsR family 22 66 4.4E-9 T 19-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APA12_RS11970 0842e2ed618b3b66c5fc482a44060270 143 Gene3D G3DSA:1.10.10.10 5 87 8.4E-24 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS11970 0842e2ed618b3b66c5fc482a44060270 143 PANTHER PTHR33154:SF9 2 105 6.9E-18 T 19-04-2016 APA12_RS11970 0842e2ed618b3b66c5fc482a44060270 143 SUPERFAMILY SSF46785 3 94 7.81E-21 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS01485 a2015024e448c0b22920d20bb44646e4 525 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 8 525 44.598 T 19-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APA12_RS01485 a2015024e448c0b22920d20bb44646e4 525 SUPERFAMILY SSF52335 8 197 1.21E-66 T 19-04-2016 IPR011607 Methylglyoxal synthase-like domain APA12_RS01485 a2015024e448c0b22920d20bb44646e4 525 Gene3D G3DSA:3.40.140.20 367 515 2.3E-57 T 19-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APA12_RS01485 a2015024e448c0b22920d20bb44646e4 525 PANTHER PTHR11692:SF2 6 525 2.3E-292 T 19-04-2016 APA12_RS01485 a2015024e448c0b22920d20bb44646e4 525 Gene3D G3DSA:3.40.140.20 242 357 7.9E-48 T 19-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APA12_RS01485 a2015024e448c0b22920d20bb44646e4 525 Pfam PF01808 AICARFT/IMPCHase bienzyme 139 449 1.6E-119 T 19-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APA12_RS01485 a2015024e448c0b22920d20bb44646e4 525 SMART SM00851 20 134 6.3E-59 T 19-04-2016 IPR011607 Methylglyoxal synthase-like domain APA12_RS01485 a2015024e448c0b22920d20bb44646e4 525 SUPERFAMILY SSF53927 213 525 3.11E-128 T 19-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 APA12_RS01485 a2015024e448c0b22920d20bb44646e4 525 Pfam PF02142 MGS-like domain 20 133 2.2E-25 T 19-04-2016 IPR011607 Methylglyoxal synthase-like domain APA12_RS01485 a2015024e448c0b22920d20bb44646e4 525 PIRSF PIRSF000414 2 525 2.3E-212 T 19-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APA12_RS01485 a2015024e448c0b22920d20bb44646e4 525 SMART SM00798 139 450 5.8E-200 T 19-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APA12_RS01485 a2015024e448c0b22920d20bb44646e4 525 Gene3D G3DSA:3.40.50.1380 7 190 7.4E-79 T 19-04-2016 IPR011607 Methylglyoxal synthase-like domain APA12_RS01485 a2015024e448c0b22920d20bb44646e4 525 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 9 525 3.1E-203 T 19-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APA12_RS01485 a2015024e448c0b22920d20bb44646e4 525 PANTHER PTHR11692 6 525 2.3E-292 T 19-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APA12_RS04795 88002033f0d9cfbb42a2a883c8e69cda 61 PANTHER PTHR15892 5 60 4.4E-17 T 19-04-2016 APA12_RS04795 88002033f0d9cfbb42a2a883c8e69cda 61 PIRSF PIRSF002211 1 61 1.5E-22 T 19-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 APA12_RS04795 88002033f0d9cfbb42a2a883c8e69cda 61 SUPERFAMILY SSF55129 5 60 3.53E-18 T 19-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain APA12_RS04795 88002033f0d9cfbb42a2a883c8e69cda 61 Pfam PF00327 Ribosomal protein L30p/L7e 8 57 1.2E-16 T 19-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain APA12_RS04795 88002033f0d9cfbb42a2a883c8e69cda 61 Gene3D G3DSA:3.30.1390.20 4 61 3.1E-26 T 19-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain APA12_RS04795 88002033f0d9cfbb42a2a883c8e69cda 61 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 4 61 18.374 T 19-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 APA12_RS04795 88002033f0d9cfbb42a2a883c8e69cda 61 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 8 61 4.8E-22 T 19-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 APA12_RS04795 88002033f0d9cfbb42a2a883c8e69cda 61 PANTHER PTHR15892:SF2 5 60 4.4E-17 T 19-04-2016 APA12_RS05355 427ea152dea4651dcd85d66c61c9821c 643 Gene3D G3DSA:3.20.70.20 556 596 1.4E-60 T 19-04-2016 APA12_RS05355 427ea152dea4651dcd85d66c61c9821c 643 Gene3D G3DSA:3.20.70.20 47 495 1.4E-60 T 19-04-2016 APA12_RS05355 427ea152dea4651dcd85d66c61c9821c 643 SUPERFAMILY SSF51998 121 500 1.37E-138 T 19-04-2016 APA12_RS05355 427ea152dea4651dcd85d66c61c9821c 643 SUPERFAMILY SSF51998 533 607 1.37E-138 T 19-04-2016 APA12_RS05355 427ea152dea4651dcd85d66c61c9821c 643 SUPERFAMILY SSF48168 46 117 1.02E-13 T 19-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APA12_RS05355 427ea152dea4651dcd85d66c61c9821c 643 PRINTS PR01183 Ribonucleotide reductase large chain signature 386 408 1.9E-15 T 19-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APA12_RS05355 427ea152dea4651dcd85d66c61c9821c 643 PRINTS PR01183 Ribonucleotide reductase large chain signature 414 437 1.9E-15 T 19-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APA12_RS05355 427ea152dea4651dcd85d66c61c9821c 643 PRINTS PR01183 Ribonucleotide reductase large chain signature 195 214 1.9E-15 T 19-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APA12_RS05355 427ea152dea4651dcd85d66c61c9821c 643 Pfam PF02867 Ribonucleotide reductase, barrel domain 122 442 1.4E-72 T 19-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APA12_RS05355 427ea152dea4651dcd85d66c61c9821c 643 Pfam PF02867 Ribonucleotide reductase, barrel domain 444 596 1.3E-37 T 19-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APA12_RS05355 427ea152dea4651dcd85d66c61c9821c 643 PANTHER PTHR11573 45 605 8.6E-213 T 19-04-2016 APA12_RS05355 427ea152dea4651dcd85d66c61c9821c 643 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 54 118 2.0E-11 T 19-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APA12_RS06705 dda455a85968826bf7a943b6f11d6ca6 313 Pfam PF00593 TonB dependent receptor 80 311 4.9E-28 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS06705 dda455a85968826bf7a943b6f11d6ca6 313 SUPERFAMILY SSF56935 13 313 1.1E-54 T 19-04-2016 APA12_RS06705 dda455a85968826bf7a943b6f11d6ca6 313 PANTHER PTHR32552:SF10 25 313 7.9E-47 T 19-04-2016 APA12_RS06705 dda455a85968826bf7a943b6f11d6ca6 313 PANTHER PTHR32552 25 313 7.9E-47 T 19-04-2016 APA12_RS06705 dda455a85968826bf7a943b6f11d6ca6 313 Gene3D G3DSA:2.40.170.20 15 313 6.7E-77 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS08350 40319aaee2c19ce95150b5b52b67d126 421 SMART SM01086 313 408 1.3E-33 T 19-04-2016 IPR019489 Clp ATPase, C-terminal APA12_RS08350 40319aaee2c19ce95150b5b52b67d126 421 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 3 411 53.164 T 19-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 APA12_RS08350 40319aaee2c19ce95150b5b52b67d126 421 Pfam PF06689 ClpX C4-type zinc finger 12 49 2.6E-20 T 19-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 APA12_RS08350 40319aaee2c19ce95150b5b52b67d126 421 SUPERFAMILY SSF52540 62 400 1.09E-73 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS08350 40319aaee2c19ce95150b5b52b67d126 421 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 9 405 1.5E-199 T 19-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 APA12_RS08350 40319aaee2c19ce95150b5b52b67d126 421 Gene3D G3DSA:3.40.50.300 290 307 2.5E-51 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS08350 40319aaee2c19ce95150b5b52b67d126 421 Gene3D G3DSA:3.40.50.300 64 251 2.5E-51 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS08350 40319aaee2c19ce95150b5b52b67d126 421 SMART SM00382 109 263 2.2E-10 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS08350 40319aaee2c19ce95150b5b52b67d126 421 SUPERFAMILY SSF57716 12 47 1.18E-11 T 19-04-2016 APA12_RS08350 40319aaee2c19ce95150b5b52b67d126 421 PANTHER PTHR11262 2 409 7.0E-253 T 19-04-2016 APA12_RS08350 40319aaee2c19ce95150b5b52b67d126 421 SMART SM00994 11 50 1.7E-24 T 19-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 APA12_RS08350 40319aaee2c19ce95150b5b52b67d126 421 Gene3D G3DSA:1.10.8.60 313 411 6.4E-36 T 19-04-2016 APA12_RS08350 40319aaee2c19ce95150b5b52b67d126 421 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 313 387 2.5E-16 T 19-04-2016 IPR019489 Clp ATPase, C-terminal APA12_RS08350 40319aaee2c19ce95150b5b52b67d126 421 Pfam PF07724 AAA domain (Cdc48 subfamily) 110 307 5.6E-50 T 19-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APA12_RS08635 535084483a06e6a9d7b979b7c45cd4c7 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 459 5.0E-12 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS08635 535084483a06e6a9d7b979b7c45cd4c7 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 407 5.0E-12 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS08635 535084483a06e6a9d7b979b7c45cd4c7 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 440 5.0E-12 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS08635 535084483a06e6a9d7b979b7c45cd4c7 460 Gene3D G3DSA:3.30.565.10 331 459 6.1E-28 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS08635 535084483a06e6a9d7b979b7c45cd4c7 460 Pfam PF00672 HAMP domain 184 248 2.4E-9 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APA12_RS08635 535084483a06e6a9d7b979b7c45cd4c7 460 Gene3D G3DSA:1.10.287.130 243 316 2.8E-14 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS08635 535084483a06e6a9d7b979b7c45cd4c7 460 PANTHER PTHR24423 194 460 1.0E-47 T 19-04-2016 APA12_RS08635 535084483a06e6a9d7b979b7c45cd4c7 460 PANTHER PTHR24423 17 29 1.0E-47 T 19-04-2016 APA12_RS08635 535084483a06e6a9d7b979b7c45cd4c7 460 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 362 459 5.0E-16 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS08635 535084483a06e6a9d7b979b7c45cd4c7 460 SMART SM00388 253 320 4.2E-9 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS08635 535084483a06e6a9d7b979b7c45cd4c7 460 SUPERFAMILY SSF47384 237 318 1.96E-13 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS08635 535084483a06e6a9d7b979b7c45cd4c7 460 SMART SM00304 200 252 1.0E-5 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APA12_RS08635 535084483a06e6a9d7b979b7c45cd4c7 460 SMART SM00387 359 460 2.5E-22 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS08635 535084483a06e6a9d7b979b7c45cd4c7 460 SUPERFAMILY SSF55874 328 459 1.83E-28 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS08635 535084483a06e6a9d7b979b7c45cd4c7 460 Pfam PF00512 His Kinase A (phospho-acceptor) domain 255 319 4.8E-10 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS03365 6145597af959727ca6b0ba1a750616eb 583 Pfam PF02096 60Kd inner membrane protein 366 566 9.5E-46 T 19-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APA12_RS03365 6145597af959727ca6b0ba1a750616eb 583 Pfam PF14849 YidC periplasmic domain 72 354 1.5E-71 T 19-04-2016 IPR028053 Membrane insertase YidC, N-terminal APA12_RS03365 6145597af959727ca6b0ba1a750616eb 583 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 570 18.387 T 19-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 APA12_RS03365 6145597af959727ca6b0ba1a750616eb 583 PANTHER PTHR12428:SF14 339 475 1.0E-55 T 19-04-2016 APA12_RS03365 6145597af959727ca6b0ba1a750616eb 583 PANTHER PTHR12428:SF14 498 566 1.0E-55 T 19-04-2016 APA12_RS03365 6145597af959727ca6b0ba1a750616eb 583 PRINTS PR00701 60kDa inner membrane protein signature 336 356 3.6E-11 T 19-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APA12_RS03365 6145597af959727ca6b0ba1a750616eb 583 PRINTS PR00701 60kDa inner membrane protein signature 256 271 3.6E-11 T 19-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APA12_RS03365 6145597af959727ca6b0ba1a750616eb 583 PRINTS PR00701 60kDa inner membrane protein signature 427 450 3.6E-11 T 19-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APA12_RS03365 6145597af959727ca6b0ba1a750616eb 583 PRINTS PR01900 YidC translocation/secretion protein signature 523 547 1.5E-16 T 19-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APA12_RS03365 6145597af959727ca6b0ba1a750616eb 583 PRINTS PR01900 YidC translocation/secretion protein signature 502 517 1.5E-16 T 19-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APA12_RS03365 6145597af959727ca6b0ba1a750616eb 583 PRINTS PR01900 YidC translocation/secretion protein signature 351 367 1.5E-16 T 19-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APA12_RS03365 6145597af959727ca6b0ba1a750616eb 583 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 364 1.3E-77 T 19-04-2016 IPR028053 Membrane insertase YidC, N-terminal APA12_RS03365 6145597af959727ca6b0ba1a750616eb 583 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 365 567 2.2E-55 T 19-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal APA12_RS03365 6145597af959727ca6b0ba1a750616eb 583 PANTHER PTHR12428 339 475 1.0E-55 T 19-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APA12_RS03365 6145597af959727ca6b0ba1a750616eb 583 PANTHER PTHR12428 498 566 1.0E-55 T 19-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APA12_RS04075 0c60ee62162fdd66f2835b2c206107a2 294 PANTHER PTHR11904:SF1 1 292 1.3E-134 T 19-04-2016 APA12_RS04075 0c60ee62162fdd66f2835b2c206107a2 294 Gene3D G3DSA:3.40.50.1580 8 270 6.8E-96 T 19-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APA12_RS04075 0c60ee62162fdd66f2835b2c206107a2 294 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 57 97 - T 19-04-2016 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 APA12_RS04075 0c60ee62162fdd66f2835b2c206107a2 294 Pfam PF01048 Phosphorylase superfamily 11 249 1.6E-43 T 19-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APA12_RS04075 0c60ee62162fdd66f2835b2c206107a2 294 PANTHER PTHR11904 1 292 1.3E-134 T 19-04-2016 IPR001369 PNP/MTAP phosphorylase APA12_RS04075 0c60ee62162fdd66f2835b2c206107a2 294 TIGRFAM TIGR01694 MTAP: methylthioadenosine phosphorylase 11 249 2.0E-98 T 19-04-2016 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 APA12_RS04075 0c60ee62162fdd66f2835b2c206107a2 294 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 9 276 42.417 T 19-04-2016 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 APA12_RS04075 0c60ee62162fdd66f2835b2c206107a2 294 SUPERFAMILY SSF53167 9 276 8.9E-96 T 19-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APA12_RS02320 f8671e58876ccc64040406c02e55b729 298 Pfam PF00248 Aldo/keto reductase family 49 279 6.0E-36 T 19-04-2016 IPR023210 NADP-dependent oxidoreductase domain APA12_RS02320 f8671e58876ccc64040406c02e55b729 298 SUPERFAMILY SSF51430 26 283 6.42E-76 T 19-04-2016 IPR023210 NADP-dependent oxidoreductase domain APA12_RS02320 f8671e58876ccc64040406c02e55b729 298 PIRSF PIRSF000097 23 297 1.4E-64 T 19-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APA12_RS02320 f8671e58876ccc64040406c02e55b729 298 PRINTS PR00069 Aldo-keto reductase signature 144 161 4.9E-36 T 19-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APA12_RS02320 f8671e58876ccc64040406c02e55b729 298 PRINTS PR00069 Aldo-keto reductase signature 112 130 4.9E-36 T 19-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APA12_RS02320 f8671e58876ccc64040406c02e55b729 298 PRINTS PR00069 Aldo-keto reductase signature 216 240 4.9E-36 T 19-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APA12_RS02320 f8671e58876ccc64040406c02e55b729 298 PRINTS PR00069 Aldo-keto reductase signature 56 80 4.9E-36 T 19-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APA12_RS02320 f8671e58876ccc64040406c02e55b729 298 PRINTS PR00069 Aldo-keto reductase signature 178 207 4.9E-36 T 19-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APA12_RS02320 f8671e58876ccc64040406c02e55b729 298 Gene3D G3DSA:3.20.20.100 26 285 3.0E-83 T 19-04-2016 IPR023210 NADP-dependent oxidoreductase domain APA12_RS02320 f8671e58876ccc64040406c02e55b729 298 PANTHER PTHR11732 23 284 1.1E-103 T 19-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APA12_RS08040 a0e820b57a2e087bf4c4e3b69fd5e863 450 SMART SM00387 334 442 4.9E-12 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS08040 a0e820b57a2e087bf4c4e3b69fd5e863 450 Pfam PF00512 His Kinase A (phospho-acceptor) domain 225 289 1.6E-12 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS08040 a0e820b57a2e087bf4c4e3b69fd5e863 450 Gene3D G3DSA:1.10.287.130 215 285 1.6E-12 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS08040 a0e820b57a2e087bf4c4e3b69fd5e863 450 Gene3D G3DSA:3.30.565.10 296 439 8.2E-19 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS08040 a0e820b57a2e087bf4c4e3b69fd5e863 450 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 342 439 8.9E-8 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS08040 a0e820b57a2e087bf4c4e3b69fd5e863 450 SUPERFAMILY SSF47384 208 289 1.06E-14 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS08040 a0e820b57a2e087bf4c4e3b69fd5e863 450 Pfam PF00672 HAMP domain 153 218 1.3E-9 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APA12_RS08040 a0e820b57a2e087bf4c4e3b69fd5e863 450 PANTHER PTHR24423:SF474 164 439 4.5E-38 T 19-04-2016 APA12_RS08040 a0e820b57a2e087bf4c4e3b69fd5e863 450 SMART SM00388 223 289 6.3E-12 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS08040 a0e820b57a2e087bf4c4e3b69fd5e863 450 SUPERFAMILY SSF55874 279 439 4.98E-18 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS08040 a0e820b57a2e087bf4c4e3b69fd5e863 450 PANTHER PTHR24423 164 439 4.5E-38 T 19-04-2016 APA12_RS06505 db9823c13d401ea02aa736ab95ae381c 781 Gene3D G3DSA:3.30.365.10 359 451 1.7E-83 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APA12_RS06505 db9823c13d401ea02aa736ab95ae381c 781 Gene3D G3DSA:3.30.365.10 617 772 1.7E-83 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APA12_RS06505 db9823c13d401ea02aa736ab95ae381c 781 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 160 702 7.0E-197 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APA12_RS06505 db9823c13d401ea02aa736ab95ae381c 781 Gene3D G3DSA:3.90.1170.50 17 138 9.5E-39 T 19-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APA12_RS06505 db9823c13d401ea02aa736ab95ae381c 781 SMART SM01008 30 138 3.5E-46 T 19-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APA12_RS06505 db9823c13d401ea02aa736ab95ae381c 781 SUPERFAMILY SSF56003 138 772 1.7E-202 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APA12_RS06505 db9823c13d401ea02aa736ab95ae381c 781 Gene3D G3DSA:3.30.365.10 187 281 5.6E-32 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APA12_RS06505 db9823c13d401ea02aa736ab95ae381c 781 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 30 138 4.2E-28 T 19-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APA12_RS06505 db9823c13d401ea02aa736ab95ae381c 781 PANTHER PTHR11908 17 777 0.0 T 19-04-2016 APA12_RS06505 db9823c13d401ea02aa736ab95ae381c 781 TIGRFAM TIGR02965 xanthine_xdhB: xanthine dehydrogenase, molybdopterin binding subunit 18 774 0.0 T 19-04-2016 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit GO:0030151 KEGG: 00230+1.17.1.4+1.17.3.2|KEGG: 00232+1.17.3.2|KEGG: 00983+1.17.3.2|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 APA12_RS06505 db9823c13d401ea02aa736ab95ae381c 781 PANTHER PTHR11908:SF66 17 777 0.0 T 19-04-2016 APA12_RS06505 db9823c13d401ea02aa736ab95ae381c 781 Gene3D G3DSA:3.30.365.10 143 186 8.8E-22 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APA12_RS06505 db9823c13d401ea02aa736ab95ae381c 781 Gene3D G3DSA:3.30.365.10 283 358 8.8E-22 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APA12_RS06505 db9823c13d401ea02aa736ab95ae381c 781 SUPERFAMILY SSF54665 17 139 1.96E-40 T 19-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APA12_RS06505 db9823c13d401ea02aa736ab95ae381c 781 Gene3D G3DSA:3.30.365.10 452 607 3.7E-51 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APA12_RS01285 0667310d5d131ceee0aa668b81b6e090 271 SUPERFAMILY SSF56300 1 258 3.79E-81 T 19-04-2016 IPR029052 Metallo-dependent phosphatase-like APA12_RS01285 0667310d5d131ceee0aa668b81b6e090 271 PANTHER PTHR36303:SF1 2 269 2.5E-123 T 19-04-2016 APA12_RS01285 0667310d5d131ceee0aa668b81b6e090 271 Gene3D G3DSA:3.60.21.30 2 263 3.9E-108 T 19-04-2016 APA12_RS01285 0667310d5d131ceee0aa668b81b6e090 271 TIGRFAM TIGR00282 TIGR00282: metallophosphoesterase, MG_246/BB_0505 family 1 252 1.7E-76 T 19-04-2016 IPR005235 Metallophosphoesterase, YmdB-like APA12_RS01285 0667310d5d131ceee0aa668b81b6e090 271 Pfam PF13277 YmdB-like protein 4 256 2.3E-101 T 19-04-2016 IPR005235 Metallophosphoesterase, YmdB-like APA12_RS01285 0667310d5d131ceee0aa668b81b6e090 271 PANTHER PTHR36303 2 269 2.5E-123 T 19-04-2016 APA12_RS01285 0667310d5d131ceee0aa668b81b6e090 271 PIRSF PIRSF004789 1 261 1.5E-90 T 19-04-2016 IPR005235 Metallophosphoesterase, YmdB-like APA12_RS06985 0d7169171cc6ad574b98cbf06234f259 274 PANTHER PTHR30502:SF0 5 267 2.4E-67 T 19-04-2016 APA12_RS06985 0d7169171cc6ad574b98cbf06234f259 274 Gene3D G3DSA:3.20.20.60 4 255 1.1E-65 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APA12_RS06985 0d7169171cc6ad574b98cbf06234f259 274 PANTHER PTHR30502 5 267 2.4E-67 T 19-04-2016 APA12_RS06985 0d7169171cc6ad574b98cbf06234f259 274 SUPERFAMILY SSF51621 3 255 8.17E-71 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APA12_RS06985 0d7169171cc6ad574b98cbf06234f259 274 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 22 244 1.8E-34 T 19-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 APA12_RS03990 e28c3404bfb612148891282a0929dc3d 541 Pfam PF01921 tRNA synthetases class I (K) 15 377 1.4E-120 T 19-04-2016 APA12_RS03990 e28c3404bfb612148891282a0929dc3d 541 SUPERFAMILY SSF52374 16 338 2.09E-53 T 19-04-2016 APA12_RS03990 e28c3404bfb612148891282a0929dc3d 541 PANTHER PTHR37940 5 539 4.1E-147 T 19-04-2016 APA12_RS03990 e28c3404bfb612148891282a0929dc3d 541 Gene3D G3DSA:1.10.10.350 440 535 7.0E-33 T 19-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APA12_RS03990 e28c3404bfb612148891282a0929dc3d 541 SUPERFAMILY SSF48163 338 535 2.09E-35 T 19-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APA12_RS03990 e28c3404bfb612148891282a0929dc3d 541 Hamap MF_00177 Lysine--tRNA ligase [lysS]. 14 535 28.815 T 19-04-2016 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APA12_RS03990 e28c3404bfb612148891282a0929dc3d 541 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 51 60 - T 19-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS03990 e28c3404bfb612148891282a0929dc3d 541 Gene3D G3DSA:3.40.50.620 239 288 6.0E-39 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS03990 e28c3404bfb612148891282a0929dc3d 541 Gene3D G3DSA:3.40.50.620 38 201 6.0E-39 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS03990 e28c3404bfb612148891282a0929dc3d 541 TIGRFAM TIGR00467 lysS_arch: lysine--tRNA ligase 45 525 1.2E-54 T 19-04-2016 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APA12_RS11095 f78480be6c467990d1b1d38aac6ab952 222 SUPERFAMILY SSF51197 25 220 1.28E-57 T 19-04-2016 APA12_RS11095 f78480be6c467990d1b1d38aac6ab952 222 Gene3D G3DSA:2.60.120.590 23 220 8.6E-56 T 19-04-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like APA12_RS11095 f78480be6c467990d1b1d38aac6ab952 222 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 26 218 5.9E-57 T 19-04-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like APA12_RS11095 f78480be6c467990d1b1d38aac6ab952 222 PANTHER PTHR16557 53 218 5.7E-46 T 19-04-2016 IPR004574 Alkylated DNA repair protein AlkB GO:0006281|GO:0055114 APA12_RS06740 eb58753de66585dbf9097f4a14dceca1 364 Gene3D G3DSA:2.40.50.100 62 96 3.1E-10 T 19-04-2016 APA12_RS06740 eb58753de66585dbf9097f4a14dceca1 364 Gene3D G3DSA:2.40.50.100 168 204 3.1E-10 T 19-04-2016 APA12_RS06740 eb58753de66585dbf9097f4a14dceca1 364 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 50 357 4.9E-35 T 19-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APA12_RS06740 eb58753de66585dbf9097f4a14dceca1 364 PANTHER PTHR30469 40 359 2.0E-31 T 19-04-2016 APA12_RS06740 eb58753de66585dbf9097f4a14dceca1 364 SUPERFAMILY SSF111369 55 256 6.28E-10 T 19-04-2016 APA12_RS06740 eb58753de66585dbf9097f4a14dceca1 364 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 265 1.4E-13 T 19-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APA12_RS03120 1bde0d96cad152d592b3dcfb4e7fd2ae 486 Gene3D G3DSA:2.40.33.10 88 181 6.1E-28 T 19-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APA12_RS03120 1bde0d96cad152d592b3dcfb4e7fd2ae 486 SUPERFAMILY SSF51621 169 351 1.43E-96 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APA12_RS03120 1bde0d96cad152d592b3dcfb4e7fd2ae 486 SUPERFAMILY SSF51621 16 89 1.43E-96 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APA12_RS03120 1bde0d96cad152d592b3dcfb4e7fd2ae 486 PANTHER PTHR11817 18 485 1.6E-201 T 19-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APA12_RS03120 1bde0d96cad152d592b3dcfb4e7fd2ae 486 Gene3D G3DSA:3.40.1380.20 335 482 1.7E-41 T 19-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APA12_RS03120 1bde0d96cad152d592b3dcfb4e7fd2ae 486 SUPERFAMILY SSF50800 85 180 6.8E-26 T 19-04-2016 IPR011037 Pyruvate kinase-like, insert domain APA12_RS03120 1bde0d96cad152d592b3dcfb4e7fd2ae 486 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 18 485 7.1E-150 T 19-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APA12_RS03120 1bde0d96cad152d592b3dcfb4e7fd2ae 486 Gene3D G3DSA:3.20.20.60 18 87 5.8E-97 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APA12_RS03120 1bde0d96cad152d592b3dcfb4e7fd2ae 486 Gene3D G3DSA:3.20.20.60 182 334 5.8E-97 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APA12_RS03120 1bde0d96cad152d592b3dcfb4e7fd2ae 486 Pfam PF00224 Pyruvate kinase, barrel domain 18 346 7.9E-116 T 19-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APA12_RS03120 1bde0d96cad152d592b3dcfb4e7fd2ae 486 SUPERFAMILY SSF52935 332 485 9.03E-35 T 19-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APA12_RS03120 1bde0d96cad152d592b3dcfb4e7fd2ae 486 Pfam PF02887 Pyruvate kinase, alpha/beta domain 367 482 3.1E-30 T 19-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APA12_RS03120 1bde0d96cad152d592b3dcfb4e7fd2ae 486 PRINTS PR01050 Pyruvate kinase family signature 303 321 2.9E-66 T 19-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APA12_RS03120 1bde0d96cad152d592b3dcfb4e7fd2ae 486 PRINTS PR01050 Pyruvate kinase family signature 253 277 2.9E-66 T 19-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APA12_RS03120 1bde0d96cad152d592b3dcfb4e7fd2ae 486 PRINTS PR01050 Pyruvate kinase family signature 226 252 2.9E-66 T 19-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APA12_RS03120 1bde0d96cad152d592b3dcfb4e7fd2ae 486 PRINTS PR01050 Pyruvate kinase family signature 278 302 2.9E-66 T 19-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APA12_RS03120 1bde0d96cad152d592b3dcfb4e7fd2ae 486 PRINTS PR01050 Pyruvate kinase family signature 322 338 2.9E-66 T 19-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APA12_RS03120 1bde0d96cad152d592b3dcfb4e7fd2ae 486 PRINTS PR01050 Pyruvate kinase family signature 199 213 2.9E-66 T 19-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APA12_RS03120 1bde0d96cad152d592b3dcfb4e7fd2ae 486 PRINTS PR01050 Pyruvate kinase family signature 74 90 2.9E-66 T 19-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APA12_RS10640 eaf486f37d9dcd696948f59bc6aca11a 886 Gene3D G3DSA:2.170.16.10 537 660 5.2E-5 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS10640 eaf486f37d9dcd696948f59bc6aca11a 886 Pfam PF13403 Hint domain 536 675 2.3E-45 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS10640 eaf486f37d9dcd696948f59bc6aca11a 886 SUPERFAMILY SSF51294 537 673 7.06E-12 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS07585 0e2bbd08c70e5a9685182ca3ac57d090 331 SUPERFAMILY SSF52374 2 329 6.57E-89 T 19-04-2016 APA12_RS07585 0e2bbd08c70e5a9685182ca3ac57d090 331 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 2 329 4.7E-92 T 19-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APA12_RS07585 0e2bbd08c70e5a9685182ca3ac57d090 331 Pfam PF00579 tRNA synthetases class I (W and Y) 3 280 8.9E-73 T 19-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS07585 0e2bbd08c70e5a9685182ca3ac57d090 331 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 64 83 9.9E-24 T 19-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APA12_RS07585 0e2bbd08c70e5a9685182ca3ac57d090 331 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 14 30 9.9E-24 T 19-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APA12_RS07585 0e2bbd08c70e5a9685182ca3ac57d090 331 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 140 161 9.9E-24 T 19-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APA12_RS07585 0e2bbd08c70e5a9685182ca3ac57d090 331 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 194 204 9.9E-24 T 19-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APA12_RS07585 0e2bbd08c70e5a9685182ca3ac57d090 331 PANTHER PTHR10055:SF10 1 331 1.4E-161 T 19-04-2016 APA12_RS07585 0e2bbd08c70e5a9685182ca3ac57d090 331 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 1 330 37.007 T 19-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 APA12_RS07585 0e2bbd08c70e5a9685182ca3ac57d090 331 PANTHER PTHR10055 1 331 1.4E-161 T 19-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APA12_RS07585 0e2bbd08c70e5a9685182ca3ac57d090 331 Gene3D G3DSA:3.40.50.620 3 204 2.6E-85 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS07585 0e2bbd08c70e5a9685182ca3ac57d090 331 Gene3D G3DSA:1.10.240.10 205 296 6.2E-15 T 19-04-2016 APA12_RS06125 9f4bd0231a38e3cfb7bbc935b95a5400 162 SUPERFAMILY SSF55961 1 143 6.72E-37 T 19-04-2016 APA12_RS06125 9f4bd0231a38e3cfb7bbc935b95a5400 162 PANTHER PTHR12901 6 160 1.9E-57 T 19-04-2016 APA12_RS06125 9f4bd0231a38e3cfb7bbc935b95a5400 162 Gene3D G3DSA:3.30.530.20 1 143 2.6E-55 T 19-04-2016 IPR023393 START-like domain APA12_RS06125 9f4bd0231a38e3cfb7bbc935b95a5400 162 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 133 1.8E-30 T 19-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain APA12_RS04990 83608bef34e0162635e61d0eb71bf5c0 466 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 86 463 47.563 T 19-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APA12_RS04990 83608bef34e0162635e61d0eb71bf5c0 466 Gene3D G3DSA:1.10.260.40 5 59 3.0E-10 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APA12_RS04990 83608bef34e0162635e61d0eb71bf5c0 466 SUPERFAMILY SSF52317 241 459 1.83E-60 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like APA12_RS04990 83608bef34e0162635e61d0eb71bf5c0 466 PANTHER PTHR11405 86 460 2.1E-203 T 19-04-2016 APA12_RS04990 83608bef34e0162635e61d0eb71bf5c0 466 SMART SM01097 86 218 2.1E-78 T 19-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APA12_RS04990 83608bef34e0162635e61d0eb71bf5c0 466 SUPERFAMILY SSF52021 87 232 9.55E-51 T 19-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APA12_RS04990 83608bef34e0162635e61d0eb71bf5c0 466 PRINTS PR00097 Anthranilate synthase component II signature 320 329 1.9E-6 T 19-04-2016 APA12_RS04990 83608bef34e0162635e61d0eb71bf5c0 466 PRINTS PR00097 Anthranilate synthase component II signature 349 360 1.9E-6 T 19-04-2016 APA12_RS04990 83608bef34e0162635e61d0eb71bf5c0 466 PRINTS PR00097 Anthranilate synthase component II signature 434 447 1.9E-6 T 19-04-2016 APA12_RS04990 83608bef34e0162635e61d0eb71bf5c0 466 PRINTS PR00096 Glutamine amidotransferase superfamily signature 434 447 3.9E-12 T 19-04-2016 APA12_RS04990 83608bef34e0162635e61d0eb71bf5c0 466 PRINTS PR00096 Glutamine amidotransferase superfamily signature 320 329 3.9E-12 T 19-04-2016 APA12_RS04990 83608bef34e0162635e61d0eb71bf5c0 466 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 360 3.9E-12 T 19-04-2016 APA12_RS04990 83608bef34e0162635e61d0eb71bf5c0 466 Gene3D G3DSA:3.50.30.20 88 231 1.1E-53 T 19-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APA12_RS04990 83608bef34e0162635e61d0eb71bf5c0 466 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 391 402 4.4E-38 T 19-04-2016 APA12_RS04990 83608bef34e0162635e61d0eb71bf5c0 466 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 366 383 4.4E-38 T 19-04-2016 APA12_RS04990 83608bef34e0162635e61d0eb71bf5c0 466 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 278 292 4.4E-38 T 19-04-2016 APA12_RS04990 83608bef34e0162635e61d0eb71bf5c0 466 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 349 365 4.4E-38 T 19-04-2016 APA12_RS04990 83608bef34e0162635e61d0eb71bf5c0 466 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 317 331 4.4E-38 T 19-04-2016 APA12_RS04990 83608bef34e0162635e61d0eb71bf5c0 466 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 88 216 1.3E-48 T 19-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APA12_RS04990 83608bef34e0162635e61d0eb71bf5c0 466 Gene3D G3DSA:3.40.50.880 241 459 5.5E-76 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like APA12_RS04990 83608bef34e0162635e61d0eb71bf5c0 466 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 88 459 2.9E-139 T 19-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APA12_RS04990 83608bef34e0162635e61d0eb71bf5c0 466 Pfam PF00117 Glutamine amidotransferase class-I 281 456 3.1E-46 T 19-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 APA12_RS03295 9ca6eb6611300ab6a18728292206b6c2 246 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 12 240 39.601 T 19-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APA12_RS03295 9ca6eb6611300ab6a18728292206b6c2 246 SUPERFAMILY SSF64005 10 234 2.62E-85 T 19-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APA12_RS03295 9ca6eb6611300ab6a18728292206b6c2 246 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 12 239 1.7E-84 T 19-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APA12_RS03295 9ca6eb6611300ab6a18728292206b6c2 246 Pfam PF01255 Putative undecaprenyl diphosphate synthase 19 239 1.8E-78 T 19-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APA12_RS03295 9ca6eb6611300ab6a18728292206b6c2 246 Gene3D G3DSA:3.40.1180.10 9 240 1.1E-94 T 19-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APA12_RS03295 9ca6eb6611300ab6a18728292206b6c2 246 PANTHER PTHR10291 12 239 2.2E-116 T 19-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APA12_RS03295 9ca6eb6611300ab6a18728292206b6c2 246 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 185 202 - T 19-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 APA12_RS07990 89db8a05d1ea2adca98f18f32c3fd046 555 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 212 317 2.6E-16 T 19-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS07990 89db8a05d1ea2adca98f18f32c3fd046 555 Gene3D G3DSA:3.30.310.50 469 546 3.5E-27 T 19-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS07990 89db8a05d1ea2adca98f18f32c3fd046 555 SUPERFAMILY SSF53738 308 450 1.1E-33 T 19-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS07990 89db8a05d1ea2adca98f18f32c3fd046 555 PANTHER PTHR22573 19 552 1.4E-267 T 19-04-2016 APA12_RS07990 89db8a05d1ea2adca98f18f32c3fd046 555 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 494 542 9.1E-10 T 19-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS07990 89db8a05d1ea2adca98f18f32c3fd046 555 PANTHER PTHR22573:SF52 19 552 1.4E-267 T 19-04-2016 APA12_RS07990 89db8a05d1ea2adca98f18f32c3fd046 555 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 41 183 3.4E-37 T 19-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS07990 89db8a05d1ea2adca98f18f32c3fd046 555 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 142 151 - T 19-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS07990 89db8a05d1ea2adca98f18f32c3fd046 555 Gene3D G3DSA:3.40.120.10 31 227 1.2E-60 T 19-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS07990 89db8a05d1ea2adca98f18f32c3fd046 555 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 323 441 8.6E-29 T 19-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS07990 89db8a05d1ea2adca98f18f32c3fd046 555 SUPERFAMILY SSF55957 436 546 1.34E-20 T 19-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS07990 89db8a05d1ea2adca98f18f32c3fd046 555 Gene3D G3DSA:3.40.120.10 228 310 1.8E-42 T 19-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS07990 89db8a05d1ea2adca98f18f32c3fd046 555 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 4 544 8.5E-275 T 19-04-2016 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|MetaCyc: PWY-7343 APA12_RS07990 89db8a05d1ea2adca98f18f32c3fd046 555 SUPERFAMILY SSF53738 212 319 1.71E-13 T 19-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS07990 89db8a05d1ea2adca98f18f32c3fd046 555 Gene3D G3DSA:3.40.120.10 311 448 2.0E-34 T 19-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS07990 89db8a05d1ea2adca98f18f32c3fd046 555 SUPERFAMILY SSF53738 26 237 3.34E-50 T 19-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS08465 84211848025161d7d0cc811016511720 633 Pfam PF00664 ABC transporter transmembrane region 68 339 2.5E-36 T 19-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APA12_RS08465 84211848025161d7d0cc811016511720 633 Pfam PF00005 ABC transporter 406 555 5.3E-32 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS08465 84211848025161d7d0cc811016511720 633 SMART SM00382 415 607 2.7E-14 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS08465 84211848025161d7d0cc811016511720 633 SUPERFAMILY SSF90123 50 372 3.14E-61 T 19-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APA12_RS08465 84211848025161d7d0cc811016511720 633 ProSitePatterns PS00211 ABC transporters family signature. 527 541 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APA12_RS08465 84211848025161d7d0cc811016511720 633 Gene3D G3DSA:1.20.1560.10 50 368 2.8E-64 T 19-04-2016 APA12_RS08465 84211848025161d7d0cc811016511720 633 PANTHER PTHR24221 47 633 1.8E-284 T 19-04-2016 APA12_RS08465 84211848025161d7d0cc811016511720 633 SUPERFAMILY SSF52540 385 625 3.0E-89 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS08465 84211848025161d7d0cc811016511720 633 PANTHER PTHR24221:SF18 47 633 1.8E-284 T 19-04-2016 APA12_RS08465 84211848025161d7d0cc811016511720 633 Gene3D G3DSA:3.40.50.300 390 620 3.0E-81 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05320 41a33c13e2865e63460b0b0c9df8d323 76 SUPERFAMILY SSF143800 1 70 8.24E-23 T 19-04-2016 APA12_RS05320 41a33c13e2865e63460b0b0c9df8d323 76 PANTHER PTHR33280:SF2 1 73 1.0E-26 T 19-04-2016 APA12_RS05320 41a33c13e2865e63460b0b0c9df8d323 76 PRINTS PR01249 Ribosomal protein L31 signature 2 19 3.7E-15 T 19-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS05320 41a33c13e2865e63460b0b0c9df8d323 76 PRINTS PR01249 Ribosomal protein L31 signature 34 49 3.7E-15 T 19-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS05320 41a33c13e2865e63460b0b0c9df8d323 76 PRINTS PR01249 Ribosomal protein L31 signature 49 67 3.7E-15 T 19-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS05320 41a33c13e2865e63460b0b0c9df8d323 76 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 71 25.563 T 19-04-2016 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS05320 41a33c13e2865e63460b0b0c9df8d323 76 ProSitePatterns PS01143 Ribosomal protein L31 signature. 38 59 - T 19-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS05320 41a33c13e2865e63460b0b0c9df8d323 76 PANTHER PTHR33280 1 73 1.0E-26 T 19-04-2016 APA12_RS05320 41a33c13e2865e63460b0b0c9df8d323 76 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 69 5.3E-33 T 19-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS05320 41a33c13e2865e63460b0b0c9df8d323 76 Pfam PF01197 Ribosomal protein L31 1 68 5.3E-27 T 19-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS03720 1576c171638ec71be06e688f88750d5d 971 SUPERFAMILY SSF50677 219 412 3.56E-44 T 19-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APA12_RS03720 1576c171638ec71be06e688f88750d5d 971 SUPERFAMILY SSF47323 686 959 3.71E-55 T 19-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS03720 1576c171638ec71be06e688f88750d5d 971 SUPERFAMILY SSF52374 437 681 1.41E-130 T 19-04-2016 APA12_RS03720 1576c171638ec71be06e688f88750d5d 971 SUPERFAMILY SSF52374 17 218 1.41E-130 T 19-04-2016 APA12_RS03720 1576c171638ec71be06e688f88750d5d 971 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 40 674 5.4E-191 T 19-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS03720 1576c171638ec71be06e688f88750d5d 971 Gene3D G3DSA:3.40.50.620 26 216 5.3E-132 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS03720 1576c171638ec71be06e688f88750d5d 971 Gene3D G3DSA:3.40.50.620 440 669 5.3E-132 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS03720 1576c171638ec71be06e688f88750d5d 971 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 595 604 8.3E-30 T 19-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APA12_RS03720 1576c171638ec71be06e688f88750d5d 971 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 435 450 8.3E-30 T 19-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APA12_RS03720 1576c171638ec71be06e688f88750d5d 971 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 248 271 8.3E-30 T 19-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APA12_RS03720 1576c171638ec71be06e688f88750d5d 971 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 562 575 8.3E-30 T 19-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APA12_RS03720 1576c171638ec71be06e688f88750d5d 971 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 64 75 8.3E-30 T 19-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APA12_RS03720 1576c171638ec71be06e688f88750d5d 971 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 15 959 19.531 T 19-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 APA12_RS03720 1576c171638ec71be06e688f88750d5d 971 Gene3D G3DSA:3.90.740.10 222 412 5.2E-52 T 19-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APA12_RS03720 1576c171638ec71be06e688f88750d5d 971 Gene3D G3DSA:1.10.730.10 676 852 1.6E-32 T 19-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS03720 1576c171638ec71be06e688f88750d5d 971 Pfam PF06827 Zinc finger found in FPG and IleRS 928 957 3.5E-5 T 19-04-2016 IPR010663 Zinc finger, FPG/IleRS-type APA12_RS03720 1576c171638ec71be06e688f88750d5d 971 PANTHER PTHR11946:SF11 303 899 0.0 T 19-04-2016 APA12_RS03720 1576c171638ec71be06e688f88750d5d 971 PANTHER PTHR11946:SF11 19 269 0.0 T 19-04-2016 APA12_RS03720 1576c171638ec71be06e688f88750d5d 971 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 71 82 - T 19-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS03720 1576c171638ec71be06e688f88750d5d 971 Pfam PF08264 Anticodon-binding domain of tRNA 718 871 1.8E-18 T 19-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 APA12_RS03720 1576c171638ec71be06e688f88750d5d 971 PANTHER PTHR11946 303 899 0.0 T 19-04-2016 APA12_RS03720 1576c171638ec71be06e688f88750d5d 971 PANTHER PTHR11946 19 269 0.0 T 19-04-2016 APA12_RS03720 1576c171638ec71be06e688f88750d5d 971 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 28 872 1.5E-246 T 19-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APA12_RS11035 6f9019f623a8e38f24e927f15642a4e8 237 PANTHER PTHR32119 10 235 2.5E-85 T 19-04-2016 APA12_RS11035 6f9019f623a8e38f24e927f15642a4e8 237 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 10 231 1.1E-42 T 19-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APA12_RS11035 6f9019f623a8e38f24e927f15642a4e8 237 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 10 231 2.8E-56 T 19-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APA12_RS11035 6f9019f623a8e38f24e927f15642a4e8 237 SMART SM00934 9 231 2.7E-80 T 19-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APA12_RS11035 6f9019f623a8e38f24e927f15642a4e8 237 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 60 73 - T 19-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APA12_RS11035 6f9019f623a8e38f24e927f15642a4e8 237 Gene3D G3DSA:3.20.20.70 8 235 4.0E-77 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS11035 6f9019f623a8e38f24e927f15642a4e8 237 SUPERFAMILY SSF51366 7 235 1.54E-65 T 19-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APA12_RS11035 6f9019f623a8e38f24e927f15642a4e8 237 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 7 236 34.799 T 19-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APA12_RS11035 6f9019f623a8e38f24e927f15642a4e8 237 PANTHER PTHR32119:SF2 10 235 2.5E-85 T 19-04-2016 APA12_RS00600 7bf04a65ab5a57b49958388eeb0a8770 511 PANTHER PTHR15184:SF3 1 494 0.0 T 19-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APA12_RS00600 7bf04a65ab5a57b49958388eeb0a8770 511 SUPERFAMILY SSF50615 10 94 2.17E-26 T 19-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APA12_RS00600 7bf04a65ab5a57b49958388eeb0a8770 511 Gene3D G3DSA:3.40.50.300 96 380 6.8E-123 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS00600 7bf04a65ab5a57b49958388eeb0a8770 511 Gene3D G3DSA:2.40.30.20 1 93 8.3E-38 T 19-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APA12_RS00600 7bf04a65ab5a57b49958388eeb0a8770 511 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 373 2.4E-73 T 19-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APA12_RS00600 7bf04a65ab5a57b49958388eeb0a8770 511 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 380 505 1.6E-46 T 19-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APA12_RS00600 7bf04a65ab5a57b49958388eeb0a8770 511 PIRSF PIRSF039088 1 511 8.2E-273 T 19-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APA12_RS00600 7bf04a65ab5a57b49958388eeb0a8770 511 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 510 2.9E-245 T 19-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APA12_RS00600 7bf04a65ab5a57b49958388eeb0a8770 511 PANTHER PTHR15184 1 494 0.0 T 19-04-2016 APA12_RS00600 7bf04a65ab5a57b49958388eeb0a8770 511 SUPERFAMILY SSF52540 97 379 1.18E-100 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS00600 7bf04a65ab5a57b49958388eeb0a8770 511 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 364 373 - T 19-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APA12_RS00600 7bf04a65ab5a57b49958388eeb0a8770 511 Gene3D G3DSA:1.20.150.20 381 509 1.2E-51 T 19-04-2016 APA12_RS00600 7bf04a65ab5a57b49958388eeb0a8770 511 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 510 49.949 T 19-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APA12_RS00600 7bf04a65ab5a57b49958388eeb0a8770 511 SUPERFAMILY SSF47917 381 509 6.8E-45 T 19-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APA12_RS00600 7bf04a65ab5a57b49958388eeb0a8770 511 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 27 93 3.8E-16 T 19-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APA12_RS01400 1092e0bc14739df2cbbd56a978bf7251 266 Pfam PF00557 Metallopeptidase family M24 17 244 1.4E-53 T 19-04-2016 IPR000994 Peptidase M24, structural domain APA12_RS01400 1092e0bc14739df2cbbd56a978bf7251 266 PRINTS PR00599 Methionine aminopeptidase-1 signature 72 85 3.35E-21 T 19-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APA12_RS01400 1092e0bc14739df2cbbd56a978bf7251 266 PRINTS PR00599 Methionine aminopeptidase-1 signature 195 207 3.35E-21 T 19-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APA12_RS01400 1092e0bc14739df2cbbd56a978bf7251 266 PRINTS PR00599 Methionine aminopeptidase-1 signature 164 176 3.35E-21 T 19-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APA12_RS01400 1092e0bc14739df2cbbd56a978bf7251 266 PRINTS PR00599 Methionine aminopeptidase-1 signature 94 110 3.35E-21 T 19-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APA12_RS01400 1092e0bc14739df2cbbd56a978bf7251 266 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 170 188 - T 19-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 APA12_RS01400 1092e0bc14739df2cbbd56a978bf7251 266 PANTHER PTHR10804:SF82 6 254 5.9E-133 T 19-04-2016 APA12_RS01400 1092e0bc14739df2cbbd56a978bf7251 266 PANTHER PTHR10804 6 254 5.9E-133 T 19-04-2016 APA12_RS01400 1092e0bc14739df2cbbd56a978bf7251 266 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 7 252 1.1E-95 T 19-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 APA12_RS01400 1092e0bc14739df2cbbd56a978bf7251 266 Hamap MF_01974 Methionine aminopeptidase [map]. 7 253 40.583 T 19-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 APA12_RS01400 1092e0bc14739df2cbbd56a978bf7251 266 SUPERFAMILY SSF55920 9 256 3.93E-89 T 19-04-2016 IPR000994 Peptidase M24, structural domain APA12_RS01400 1092e0bc14739df2cbbd56a978bf7251 266 Gene3D G3DSA:3.90.230.10 9 254 8.0E-97 T 19-04-2016 IPR000994 Peptidase M24, structural domain APA12_RS07055 466d6533613ec54f4f514dbf6e8f1a0f 1179 SUPERFAMILY SSF50891 895 1027 2.05E-25 T 19-04-2016 IPR029000 Cyclophilin-like domain APA12_RS07055 466d6533613ec54f4f514dbf6e8f1a0f 1179 Gene3D G3DSA:2.40.100.10 895 1034 1.5E-43 T 19-04-2016 IPR029000 Cyclophilin-like domain APA12_RS07055 466d6533613ec54f4f514dbf6e8f1a0f 1179 Gene3D G3DSA:2.40.100.10 625 749 8.1E-31 T 19-04-2016 IPR029000 Cyclophilin-like domain APA12_RS07055 466d6533613ec54f4f514dbf6e8f1a0f 1179 SUPERFAMILY SSF50891 626 748 7.21E-31 T 19-04-2016 IPR029000 Cyclophilin-like domain APA12_RS07055 466d6533613ec54f4f514dbf6e8f1a0f 1179 Gene3D G3DSA:3.30.470.20 204 441 7.8E-88 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APA12_RS07055 466d6533613ec54f4f514dbf6e8f1a0f 1179 Gene3D G3DSA:3.30.1490.20 129 201 1.4E-23 T 19-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APA12_RS07055 466d6533613ec54f4f514dbf6e8f1a0f 1179 Pfam PF02626 Allophanate hydrolase subunit 2 472 745 9.8E-82 T 19-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B APA12_RS07055 466d6533613ec54f4f514dbf6e8f1a0f 1179 SMART SM00796 777 1011 4.4E-102 T 19-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D APA12_RS07055 466d6533613ec54f4f514dbf6e8f1a0f 1179 PANTHER PTHR18866:SF91 1 538 8.8E-272 T 19-04-2016 APA12_RS07055 466d6533613ec54f4f514dbf6e8f1a0f 1179 PANTHER PTHR18866:SF91 1085 1177 8.8E-272 T 19-04-2016 APA12_RS07055 466d6533613ec54f4f514dbf6e8f1a0f 1179 SUPERFAMILY SSF160467 779 872 2.62E-18 T 19-04-2016 APA12_RS07055 466d6533613ec54f4f514dbf6e8f1a0f 1179 PANTHER PTHR18866 1 538 8.8E-272 T 19-04-2016 APA12_RS07055 466d6533613ec54f4f514dbf6e8f1a0f 1179 PANTHER PTHR18866 1085 1177 8.8E-272 T 19-04-2016 APA12_RS07055 466d6533613ec54f4f514dbf6e8f1a0f 1179 SUPERFAMILY SSF56059 83 350 1.06E-62 T 19-04-2016 APA12_RS07055 466d6533613ec54f4f514dbf6e8f1a0f 1179 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APA12_RS07055 466d6533613ec54f4f514dbf6e8f1a0f 1179 Pfam PF02785 Biotin carboxylase C-terminal domain 336 440 1.6E-32 T 19-04-2016 IPR005482 Biotin carboxylase, C-terminal APA12_RS07055 466d6533613ec54f4f514dbf6e8f1a0f 1179 Pfam PF00364 Biotin-requiring enzyme 1117 1175 4.0E-16 T 19-04-2016 IPR000089 Biotin/lipoyl attachment APA12_RS07055 466d6533613ec54f4f514dbf6e8f1a0f 1179 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 448 748 8.4E-84 T 19-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B APA12_RS07055 466d6533613ec54f4f514dbf6e8f1a0f 1179 Gene3D G3DSA:3.40.50.20 1 128 4.6E-43 T 19-04-2016 IPR016185 Pre-ATP-grasp domain APA12_RS07055 466d6533613ec54f4f514dbf6e8f1a0f 1179 SUPERFAMILY SSF51230 1098 1176 7.46E-19 T 19-04-2016 IPR011053 Single hybrid motif APA12_RS07055 466d6533613ec54f4f514dbf6e8f1a0f 1179 SUPERFAMILY SSF52440 1 112 4.1E-41 T 19-04-2016 IPR016185 Pre-ATP-grasp domain APA12_RS07055 466d6533613ec54f4f514dbf6e8f1a0f 1179 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APA12_RS07055 466d6533613ec54f4f514dbf6e8f1a0f 1179 SMART SM00797 471 760 6.9E-147 T 19-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B APA12_RS07055 466d6533613ec54f4f514dbf6e8f1a0f 1179 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 319 2.3E-64 T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APA12_RS07055 466d6533613ec54f4f514dbf6e8f1a0f 1179 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 4.5E-38 T 19-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain APA12_RS07055 466d6533613ec54f4f514dbf6e8f1a0f 1179 Gene3D G3DSA:2.40.50.100 1107 1176 4.4E-21 T 19-04-2016 APA12_RS07055 466d6533613ec54f4f514dbf6e8f1a0f 1179 Pfam PF02682 Allophanate hydrolase subunit 1 779 998 4.0E-45 T 19-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D APA12_RS07055 466d6533613ec54f4f514dbf6e8f1a0f 1179 SMART SM00878 336 440 3.6E-49 T 19-04-2016 IPR005482 Biotin carboxylase, C-terminal APA12_RS07055 466d6533613ec54f4f514dbf6e8f1a0f 1179 SUPERFAMILY SSF51246 330 442 1.36E-33 T 19-04-2016 IPR011054 Rudiment single hybrid motif APA12_RS07055 466d6533613ec54f4f514dbf6e8f1a0f 1179 Gene3D G3DSA:3.30.1360.40 779 856 7.0E-23 T 19-04-2016 IPR024946 Arginine repressor C-terminal-like domain APA12_RS07505 734a4d899895c20b20eaa6fc234fd050 311 Pfam PF09163 Formate dehydrogenase N, transmembrane 247 288 3.4E-19 T 19-04-2016 IPR015246 Formate dehydrogenase, transmembrane APA12_RS07505 734a4d899895c20b20eaa6fc234fd050 311 Pfam PF13247 4Fe-4S dicluster domain 93 189 2.6E-25 T 19-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APA12_RS07505 734a4d899895c20b20eaa6fc234fd050 311 PANTHER PTHR11938:SF84 1 206 4.0E-127 T 19-04-2016 APA12_RS07505 734a4d899895c20b20eaa6fc234fd050 311 PIRSF PIRSF036298 1 305 1.0E-152 T 19-04-2016 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 APA12_RS07505 734a4d899895c20b20eaa6fc234fd050 311 PANTHER PTHR11938 1 206 4.0E-127 T 19-04-2016 APA12_RS07505 734a4d899895c20b20eaa6fc234fd050 311 Gene3D G3DSA:3.30.70.20 106 138 5.6E-11 T 19-04-2016 APA12_RS07505 734a4d899895c20b20eaa6fc234fd050 311 Gene3D G3DSA:3.30.70.20 174 228 7.4E-36 T 19-04-2016 APA12_RS07505 734a4d899895c20b20eaa6fc234fd050 311 Gene3D G3DSA:3.30.70.20 29 105 7.4E-36 T 19-04-2016 APA12_RS07505 734a4d899895c20b20eaa6fc234fd050 311 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 134 145 - T 19-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APA12_RS07505 734a4d899895c20b20eaa6fc234fd050 311 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 7 287 7.0E-137 T 19-04-2016 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 APA12_RS07505 734a4d899895c20b20eaa6fc234fd050 311 Gene3D G3DSA:3.30.70.20 139 173 1.1E-14 T 19-04-2016 APA12_RS07505 734a4d899895c20b20eaa6fc234fd050 311 Gene3D G3DSA:1.20.5.480 248 292 1.3E-18 T 19-04-2016 APA12_RS07505 734a4d899895c20b20eaa6fc234fd050 311 SUPERFAMILY SSF54862 28 286 7.01E-68 T 19-04-2016 APA12_RS05170 5f1252063e22c333cae08156445c22cc 437 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 55 99 3.0E-6 T 19-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APA12_RS05170 5f1252063e22c333cae08156445c22cc 437 PANTHER PTHR11262 209 437 2.0E-198 T 19-04-2016 APA12_RS05170 5f1252063e22c333cae08156445c22cc 437 PANTHER PTHR11262 1 107 2.0E-198 T 19-04-2016 APA12_RS05170 5f1252063e22c333cae08156445c22cc 437 Gene3D G3DSA:1.10.8.60 328 437 2.4E-33 T 19-04-2016 APA12_RS05170 5f1252063e22c333cae08156445c22cc 437 Gene3D G3DSA:1.10.8.10 204 234 4.9E-22 T 19-04-2016 APA12_RS05170 5f1252063e22c333cae08156445c22cc 437 Gene3D G3DSA:1.10.8.10 113 168 4.9E-22 T 19-04-2016 APA12_RS05170 5f1252063e22c333cae08156445c22cc 437 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 7 437 1.6E-176 T 19-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 APA12_RS05170 5f1252063e22c333cae08156445c22cc 437 SMART SM01086 329 423 1.5E-23 T 19-04-2016 IPR019489 Clp ATPase, C-terminal APA12_RS05170 5f1252063e22c333cae08156445c22cc 437 Gene3D G3DSA:3.40.50.300 7 112 5.1E-49 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05170 5f1252063e22c333cae08156445c22cc 437 Gene3D G3DSA:3.40.50.300 236 325 5.1E-49 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05170 5f1252063e22c333cae08156445c22cc 437 SMART SM00382 51 326 3.9E-12 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS05170 5f1252063e22c333cae08156445c22cc 437 PANTHER PTHR11262:SF3 209 437 2.0E-198 T 19-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 APA12_RS05170 5f1252063e22c333cae08156445c22cc 437 PANTHER PTHR11262:SF3 1 107 2.0E-198 T 19-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 APA12_RS05170 5f1252063e22c333cae08156445c22cc 437 Pfam PF07724 AAA domain (Cdc48 subfamily) 196 323 7.2E-37 T 19-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APA12_RS05170 5f1252063e22c333cae08156445c22cc 437 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 329 399 3.0E-7 T 19-04-2016 IPR019489 Clp ATPase, C-terminal APA12_RS05170 5f1252063e22c333cae08156445c22cc 437 SUPERFAMILY SSF52540 7 429 1.88E-76 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS14860 3dbb1ea6a748c2a535446bacdf9d550b 118 Pfam PF00905 Penicillin binding protein transpeptidase domain 19 111 2.5E-12 T 19-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 APA12_RS14860 3dbb1ea6a748c2a535446bacdf9d550b 118 PANTHER PTHR32282 21 118 1.7E-29 T 19-04-2016 APA12_RS14860 3dbb1ea6a748c2a535446bacdf9d550b 118 Gene3D G3DSA:3.40.710.10 18 118 2.3E-36 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APA12_RS14860 3dbb1ea6a748c2a535446bacdf9d550b 118 SUPERFAMILY SSF56601 18 118 2.62E-35 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APA12_RS06270 932c2cb55c5c9d98fc4bd443dc4885f6 213 Pfam PF10691 Protein of unknown function (DUF2497) 131 210 9.9E-21 T 19-04-2016 IPR019632 Protein of unknown function DUF2497 APA12_RS12335 a2f69dade09398c94dcfd9a27fd362ec 305 Pfam PF03466 LysR substrate binding domain 90 293 1.5E-45 T 19-04-2016 IPR005119 LysR, substrate-binding APA12_RS12335 a2f69dade09398c94dcfd9a27fd362ec 305 Gene3D G3DSA:3.40.190.10 90 175 1.0E-7 T 19-04-2016 APA12_RS12335 a2f69dade09398c94dcfd9a27fd362ec 305 Gene3D G3DSA:1.10.10.10 4 84 4.0E-24 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS12335 a2f69dade09398c94dcfd9a27fd362ec 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 2.8E-17 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS12335 a2f69dade09398c94dcfd9a27fd362ec 305 Gene3D G3DSA:3.40.190.10 176 258 5.5E-23 T 19-04-2016 APA12_RS12335 a2f69dade09398c94dcfd9a27fd362ec 305 SUPERFAMILY SSF53850 90 299 1.19E-46 T 19-04-2016 APA12_RS12335 a2f69dade09398c94dcfd9a27fd362ec 305 PANTHER PTHR30537 1 303 2.3E-121 T 19-04-2016 APA12_RS12335 a2f69dade09398c94dcfd9a27fd362ec 305 PANTHER PTHR30537:SF5 1 303 2.3E-121 T 19-04-2016 APA12_RS12335 a2f69dade09398c94dcfd9a27fd362ec 305 SUPERFAMILY SSF46785 5 113 8.52E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS08645 5c6cbc2234c0bacdd60461aa875eb444 173 Pfam PF12802 MarR family 46 104 1.6E-9 T 19-04-2016 APA12_RS08645 5c6cbc2234c0bacdd60461aa875eb444 173 Gene3D G3DSA:1.10.10.10 25 151 3.6E-24 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS08645 5c6cbc2234c0bacdd60461aa875eb444 173 PANTHER PTHR33164 16 164 2.6E-14 T 19-04-2016 APA12_RS08645 5c6cbc2234c0bacdd60461aa875eb444 173 SUPERFAMILY SSF46785 25 152 1.68E-24 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS08645 5c6cbc2234c0bacdd60461aa875eb444 173 SMART SM00347 40 140 5.3E-15 T 19-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APA12_RS12325 48ce0eeec45a1b41e68996c4774a1c78 155 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 41 155 25.209 T 19-04-2016 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 APA12_RS12325 48ce0eeec45a1b41e68996c4774a1c78 155 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 43 151 3.5E-41 T 19-04-2016 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 APA12_RS12325 48ce0eeec45a1b41e68996c4774a1c78 155 PANTHER PTHR33866:SF2 36 153 2.2E-36 T 19-04-2016 APA12_RS12325 48ce0eeec45a1b41e68996c4774a1c78 155 SUPERFAMILY SSF56276 43 153 1.69E-34 T 19-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 APA12_RS12325 48ce0eeec45a1b41e68996c4774a1c78 155 Pfam PF02675 S-adenosylmethionine decarboxylase 47 151 5.7E-35 T 19-04-2016 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 APA12_RS12325 48ce0eeec45a1b41e68996c4774a1c78 155 Gene3D G3DSA:3.60.90.10 32 151 1.1E-42 T 19-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 APA12_RS12325 48ce0eeec45a1b41e68996c4774a1c78 155 PANTHER PTHR33866 36 153 2.2E-36 T 19-04-2016 APA12_RS08185 cf34b4ee54e9cb3e2d60f42b0f75b2b1 203 PANTHER PTHR30007:SF22 57 201 4.7E-28 T 19-04-2016 APA12_RS08185 cf34b4ee54e9cb3e2d60f42b0f75b2b1 203 PANTHER PTHR30007 57 201 4.7E-28 T 19-04-2016 APA12_RS08185 cf34b4ee54e9cb3e2d60f42b0f75b2b1 203 Pfam PF13586 Transposase DDE domain 118 202 8.8E-16 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS01450 046a009d8a6b423a90e1c3686ace1f11 237 PANTHER PTHR26402 7 237 3.9E-101 T 19-04-2016 APA12_RS01450 046a009d8a6b423a90e1c3686ace1f11 237 Gene3D G3DSA:3.40.50.2300 4 128 4.7E-39 T 19-04-2016 APA12_RS01450 046a009d8a6b423a90e1c3686ace1f11 237 SMART SM00862 158 234 4.4E-19 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APA12_RS01450 046a009d8a6b423a90e1c3686ace1f11 237 SMART SM00448 7 117 5.6E-40 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS01450 046a009d8a6b423a90e1c3686ace1f11 237 Pfam PF00072 Response regulator receiver domain 9 118 8.9E-29 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS01450 046a009d8a6b423a90e1c3686ace1f11 237 SUPERFAMILY SSF46894 140 235 1.22E-24 T 19-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APA12_RS01450 046a009d8a6b423a90e1c3686ace1f11 237 Gene3D G3DSA:1.10.10.10 140 236 2.2E-25 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS01450 046a009d8a6b423a90e1c3686ace1f11 237 SUPERFAMILY SSF52172 5 128 4.55E-39 T 19-04-2016 IPR011006 CheY-like superfamily APA12_RS01450 046a009d8a6b423a90e1c3686ace1f11 237 PANTHER PTHR26402:SF476 7 237 3.9E-101 T 19-04-2016 APA12_RS01450 046a009d8a6b423a90e1c3686ace1f11 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 233 3.6E-21 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APA12_RS13010 c9cdf20600ed13c7839119785453c2a3 522 Pfam PF13180 PDZ domain 320 388 3.7E-15 T 19-04-2016 IPR001478 PDZ domain GO:0005515 APA12_RS13010 c9cdf20600ed13c7839119785453c2a3 522 Pfam PF13180 PDZ domain 427 498 4.7E-10 T 19-04-2016 IPR001478 PDZ domain GO:0005515 APA12_RS13010 c9cdf20600ed13c7839119785453c2a3 522 Gene3D G3DSA:2.30.42.10 412 505 1.5E-21 T 19-04-2016 IPR001478 PDZ domain GO:0005515 APA12_RS13010 c9cdf20600ed13c7839119785453c2a3 522 Gene3D G3DSA:2.30.42.10 294 394 2.2E-24 T 19-04-2016 IPR001478 PDZ domain GO:0005515 APA12_RS13010 c9cdf20600ed13c7839119785453c2a3 522 Pfam PF13365 Trypsin-like peptidase domain 117 251 3.4E-36 T 19-04-2016 APA12_RS13010 c9cdf20600ed13c7839119785453c2a3 522 SUPERFAMILY SSF50156 275 388 1.28E-22 T 19-04-2016 IPR001478 PDZ domain GO:0005515 APA12_RS13010 c9cdf20600ed13c7839119785453c2a3 522 PANTHER PTHR22939 99 398 1.4E-113 T 19-04-2016 APA12_RS13010 c9cdf20600ed13c7839119785453c2a3 522 PANTHER PTHR22939 60 81 1.4E-113 T 19-04-2016 APA12_RS13010 c9cdf20600ed13c7839119785453c2a3 522 PRINTS PR00834 HtrA/DegQ protease family signature 188 212 1.4E-53 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APA12_RS13010 c9cdf20600ed13c7839119785453c2a3 522 PRINTS PR00834 HtrA/DegQ protease family signature 126 138 1.4E-53 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APA12_RS13010 c9cdf20600ed13c7839119785453c2a3 522 PRINTS PR00834 HtrA/DegQ protease family signature 147 167 1.4E-53 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APA12_RS13010 c9cdf20600ed13c7839119785453c2a3 522 PRINTS PR00834 HtrA/DegQ protease family signature 244 261 1.4E-53 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APA12_RS13010 c9cdf20600ed13c7839119785453c2a3 522 PRINTS PR00834 HtrA/DegQ protease family signature 222 239 1.4E-53 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APA12_RS13010 c9cdf20600ed13c7839119785453c2a3 522 PRINTS PR00834 HtrA/DegQ protease family signature 338 350 1.4E-53 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APA12_RS13010 c9cdf20600ed13c7839119785453c2a3 522 SUPERFAMILY SSF50494 58 283 1.34E-67 T 19-04-2016 IPR009003 Peptidase S1, PA clan APA12_RS13010 c9cdf20600ed13c7839119785453c2a3 522 PANTHER PTHR22939:SF79 99 398 1.4E-113 T 19-04-2016 APA12_RS13010 c9cdf20600ed13c7839119785453c2a3 522 PANTHER PTHR22939:SF79 60 81 1.4E-113 T 19-04-2016 APA12_RS13010 c9cdf20600ed13c7839119785453c2a3 522 Gene3D G3DSA:2.40.10.10 51 182 2.6E-34 T 19-04-2016 APA12_RS13010 c9cdf20600ed13c7839119785453c2a3 522 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 60 501 1.9E-139 T 19-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 APA12_RS13010 c9cdf20600ed13c7839119785453c2a3 522 Gene3D G3DSA:2.40.10.10 183 293 9.2E-45 T 19-04-2016 APA12_RS13010 c9cdf20600ed13c7839119785453c2a3 522 SMART SM00228 291 380 3.6E-9 T 19-04-2016 IPR001478 PDZ domain GO:0005515 APA12_RS13010 c9cdf20600ed13c7839119785453c2a3 522 SMART SM00228 411 495 3.1E-11 T 19-04-2016 IPR001478 PDZ domain GO:0005515 APA12_RS13010 c9cdf20600ed13c7839119785453c2a3 522 SUPERFAMILY SSF50156 412 504 2.37E-19 T 19-04-2016 IPR001478 PDZ domain GO:0005515 APA12_RS00515 c5a36c6b971d4a9ac1642b00fbc272e3 676 PANTHER PTHR10366 292 577 3.6E-104 T 19-04-2016 APA12_RS00515 c5a36c6b971d4a9ac1642b00fbc272e3 676 SUPERFAMILY SSF51735 147 281 6.69E-6 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS00515 c5a36c6b971d4a9ac1642b00fbc272e3 676 Gene3D G3DSA:3.40.50.720 529 553 8.3E-50 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS00515 c5a36c6b971d4a9ac1642b00fbc272e3 676 Gene3D G3DSA:3.40.50.720 292 495 8.3E-50 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS00515 c5a36c6b971d4a9ac1642b00fbc272e3 676 SUPERFAMILY SSF51735 290 574 6.04E-53 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS00515 c5a36c6b971d4a9ac1642b00fbc272e3 676 Gene3D G3DSA:3.40.50.720 139 202 3.8E-5 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS00515 c5a36c6b971d4a9ac1642b00fbc272e3 676 Pfam PF02719 Polysaccharide biosynthesis protein 293 592 6.3E-106 T 19-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain APA12_RS00515 c5a36c6b971d4a9ac1642b00fbc272e3 676 Pfam PF13727 CoA-binding domain 88 205 5.3E-6 T 19-04-2016 APA12_RS00515 c5a36c6b971d4a9ac1642b00fbc272e3 676 PANTHER PTHR10366:SF256 292 577 3.6E-104 T 19-04-2016 APA12_RS09740 d54a3cc88551aff407cbec2389b88a25 442 Gene3D G3DSA:1.10.10.350 364 438 1.9E-13 T 19-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APA12_RS09740 d54a3cc88551aff407cbec2389b88a25 442 SUPERFAMILY SSF52374 3 299 4.56E-87 T 19-04-2016 APA12_RS09740 d54a3cc88551aff407cbec2389b88a25 442 Gene3D G3DSA:1.10.1160.10 236 315 7.8E-16 T 19-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 APA12_RS09740 d54a3cc88551aff407cbec2389b88a25 442 PANTHER PTHR11451:SF41 1 311 4.6E-69 T 19-04-2016 APA12_RS09740 d54a3cc88551aff407cbec2389b88a25 442 PANTHER PTHR11451 1 311 4.6E-69 T 19-04-2016 APA12_RS09740 d54a3cc88551aff407cbec2389b88a25 442 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 305 8.4E-69 T 19-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 APA12_RS09740 d54a3cc88551aff407cbec2389b88a25 442 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 325 3.2E-94 T 19-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APA12_RS09740 d54a3cc88551aff407cbec2389b88a25 442 Gene3D G3DSA:3.40.50.620 182 233 3.4E-43 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS09740 d54a3cc88551aff407cbec2389b88a25 442 Gene3D G3DSA:3.40.50.620 2 65 3.4E-43 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS09740 d54a3cc88551aff407cbec2389b88a25 442 Gene3D G3DSA:3.90.800.10 66 179 1.5E-31 T 19-04-2016 APA12_RS09740 d54a3cc88551aff407cbec2389b88a25 442 PRINTS PR00987 Glutamyl-tRNA synthetase signature 18 29 3.1E-20 T 19-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APA12_RS09740 d54a3cc88551aff407cbec2389b88a25 442 PRINTS PR00987 Glutamyl-tRNA synthetase signature 180 190 3.1E-20 T 19-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APA12_RS09740 d54a3cc88551aff407cbec2389b88a25 442 PRINTS PR00987 Glutamyl-tRNA synthetase signature 33 46 3.1E-20 T 19-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APA12_RS09740 d54a3cc88551aff407cbec2389b88a25 442 PRINTS PR00987 Glutamyl-tRNA synthetase signature 196 204 3.1E-20 T 19-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APA12_RS09740 d54a3cc88551aff407cbec2389b88a25 442 PRINTS PR00987 Glutamyl-tRNA synthetase signature 4 16 3.1E-20 T 19-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APA12_RS09740 d54a3cc88551aff407cbec2389b88a25 442 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 1 442 26.634 T 19-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APA12_RS09740 d54a3cc88551aff407cbec2389b88a25 442 SUPERFAMILY SSF48163 281 438 4.32E-28 T 19-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APA12_RS09740 d54a3cc88551aff407cbec2389b88a25 442 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 7 18 - T 19-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS10850 2c997ab478684573c0d1cc072725b11e 296 SUPERFAMILY SSF88659 188 283 8.22E-21 T 19-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS10850 2c997ab478684573c0d1cc072725b11e 296 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 47 280 8.4E-33 T 19-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS10850 2c997ab478684573c0d1cc072725b11e 296 Pfam PF00140 Sigma-70 factor, region 1.2 15 41 1.3E-9 T 19-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS10850 2c997ab478684573c0d1cc072725b11e 296 Pfam PF04542 Sigma-70 region 2 51 116 3.6E-17 T 19-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS10850 2c997ab478684573c0d1cc072725b11e 296 SUPERFAMILY SSF88946 11 119 2.35E-40 T 19-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS10850 2c997ab478684573c0d1cc072725b11e 296 Gene3D G3DSA:1.10.10.10 224 284 1.5E-18 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS10850 2c997ab478684573c0d1cc072725b11e 296 Pfam PF04545 Sigma-70, region 4 228 278 2.1E-16 T 19-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS10850 2c997ab478684573c0d1cc072725b11e 296 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 251 277 - T 19-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS10850 2c997ab478684573c0d1cc072725b11e 296 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 1 283 49.883 T 19-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 APA12_RS10850 2c997ab478684573c0d1cc072725b11e 296 PANTHER PTHR30376 1 289 1.3E-100 T 19-04-2016 APA12_RS10850 2c997ab478684573c0d1cc072725b11e 296 PRINTS PR00046 Major sigma-70 factor signature 99 107 3.8E-21 T 19-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS10850 2c997ab478684573c0d1cc072725b11e 296 PRINTS PR00046 Major sigma-70 factor signature 75 88 3.8E-21 T 19-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS10850 2c997ab478684573c0d1cc072725b11e 296 PRINTS PR00046 Major sigma-70 factor signature 251 266 3.8E-21 T 19-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS10850 2c997ab478684573c0d1cc072725b11e 296 PRINTS PR00046 Major sigma-70 factor signature 266 277 3.8E-21 T 19-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS10850 2c997ab478684573c0d1cc072725b11e 296 PRINTS PR00046 Major sigma-70 factor signature 232 244 3.8E-21 T 19-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS10850 2c997ab478684573c0d1cc072725b11e 296 PIRSF PIRSF000770 4 295 1.7E-41 T 19-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 APA12_RS10850 2c997ab478684573c0d1cc072725b11e 296 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 13 282 4.3E-112 T 19-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 APA12_RS10850 2c997ab478684573c0d1cc072725b11e 296 Gene3D G3DSA:1.10.601.10 13 116 3.4E-39 T 19-04-2016 APA12_RS12730 e74de66eff807f09ce3fefb0b3db2a38 519 SMART SM00079 51 266 0.0013 T 19-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 APA12_RS12730 e74de66eff807f09ce3fefb0b3db2a38 519 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 309 406 5.3E-31 T 19-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 APA12_RS12730 e74de66eff807f09ce3fefb0b3db2a38 519 PANTHER PTHR30614 66 517 9.8E-81 T 19-04-2016 APA12_RS12730 e74de66eff807f09ce3fefb0b3db2a38 519 Gene3D G3DSA:3.40.190.10 124 224 8.2E-24 T 19-04-2016 APA12_RS12730 e74de66eff807f09ce3fefb0b3db2a38 519 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 52 261 5.5E-54 T 19-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APA12_RS12730 e74de66eff807f09ce3fefb0b3db2a38 519 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 331 511 7.9E-21 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS12730 e74de66eff807f09ce3fefb0b3db2a38 519 SMART SM00062 43 265 4.3E-51 T 19-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APA12_RS12730 e74de66eff807f09ce3fefb0b3db2a38 519 Gene3D G3DSA:1.10.3720.10 310 511 4.1E-45 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS12730 e74de66eff807f09ce3fefb0b3db2a38 519 Gene3D G3DSA:3.40.190.10 225 261 1.1E-29 T 19-04-2016 APA12_RS12730 e74de66eff807f09ce3fefb0b3db2a38 519 Gene3D G3DSA:3.40.190.10 40 123 1.1E-29 T 19-04-2016 APA12_RS12730 e74de66eff807f09ce3fefb0b3db2a38 519 SUPERFAMILY SSF53850 18 261 4.73E-57 T 19-04-2016 APA12_RS12730 e74de66eff807f09ce3fefb0b3db2a38 519 SUPERFAMILY SSF161098 310 497 5.76E-43 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS13825 1fd6ea2a45b28a8c821a2589f87b63e4 153 Pfam PF00155 Aminotransferase class I and II 1 151 8.9E-27 T 19-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APA12_RS13825 1fd6ea2a45b28a8c821a2589f87b63e4 153 PANTHER PTHR13693:SF57 1 153 2.8E-72 T 19-04-2016 APA12_RS13825 1fd6ea2a45b28a8c821a2589f87b63e4 153 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 57 66 - T 19-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 APA12_RS13825 1fd6ea2a45b28a8c821a2589f87b63e4 153 PANTHER PTHR13693 1 153 2.8E-72 T 19-04-2016 APA12_RS13825 1fd6ea2a45b28a8c821a2589f87b63e4 153 SUPERFAMILY SSF53383 1 151 1.81E-40 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APA12_RS13825 1fd6ea2a45b28a8c821a2589f87b63e4 153 Gene3D G3DSA:3.40.640.10 1 92 1.7E-37 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APA12_RS13825 1fd6ea2a45b28a8c821a2589f87b63e4 153 Gene3D G3DSA:3.90.1150.10 93 151 1.1E-9 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APA12_RS00690 21e559729678fecae84d2dc0e1f4a89d 350 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 324 340 3.8E-5 T 19-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APA12_RS00690 21e559729678fecae84d2dc0e1f4a89d 350 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 309 324 3.8E-5 T 19-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APA12_RS00690 21e559729678fecae84d2dc0e1f4a89d 350 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 28 209 1.0E-42 T 19-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal APA12_RS00690 21e559729678fecae84d2dc0e1f4a89d 350 Pfam PF12833 Helix-turn-helix domain 264 342 6.7E-16 T 19-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APA12_RS00690 21e559729678fecae84d2dc0e1f4a89d 350 PANTHER PTHR11019 245 348 1.6E-24 T 19-04-2016 APA12_RS00690 21e559729678fecae84d2dc0e1f4a89d 350 PANTHER PTHR11019:SF52 245 348 1.6E-24 T 19-04-2016 APA12_RS00690 21e559729678fecae84d2dc0e1f4a89d 350 SMART SM00342 260 340 5.1E-18 T 19-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APA12_RS00690 21e559729678fecae84d2dc0e1f4a89d 350 Gene3D G3DSA:1.10.10.60 294 344 4.4E-14 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS00690 21e559729678fecae84d2dc0e1f4a89d 350 SUPERFAMILY SSF46689 294 344 9.73E-13 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS12900 903246dfa67c0d557c800a89c61677df 178 Pfam PF05258 Protein of unknown function (DUF721) 39 124 4.1E-16 T 19-04-2016 IPR007922 Protein of unknown function DUF721/UPF0232 APA12_RS12900 903246dfa67c0d557c800a89c61677df 178 PIRSF PIRSF032064 11 176 1.3E-27 T 19-04-2016 IPR010593 Protein of unknown function DUF1159 APA12_RS10735 11cb2cd8028112003080c056d7198427 271 PANTHER PTHR30371 9 271 2.6E-85 T 19-04-2016 APA12_RS10735 11cb2cd8028112003080c056d7198427 271 Pfam PF00902 Sec-independent protein translocase protein (TatC) 21 241 4.0E-67 T 19-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APA12_RS10735 11cb2cd8028112003080c056d7198427 271 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 19 246 3.6E-64 T 19-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APA12_RS10735 11cb2cd8028112003080c056d7198427 271 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 3 264 18.571 T 19-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APA12_RS10735 11cb2cd8028112003080c056d7198427 271 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 116 142 1.6E-42 T 19-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APA12_RS10735 11cb2cd8028112003080c056d7198427 271 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 98 116 1.6E-42 T 19-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APA12_RS10735 11cb2cd8028112003080c056d7198427 271 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 174 202 1.6E-42 T 19-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APA12_RS10735 11cb2cd8028112003080c056d7198427 271 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 18 45 1.6E-42 T 19-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APA12_RS10735 11cb2cd8028112003080c056d7198427 271 PANTHER PTHR30371:SF0 9 271 2.6E-85 T 19-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APA12_RS10735 11cb2cd8028112003080c056d7198427 271 ProSitePatterns PS01218 TatC family signature. 174 193 - T 19-04-2016 IPR019820 Sec-independent periplasmic protein translocase, conserved site APA12_RS10455 3a0f9a1c73a32ea65ee28fb463ad8a5b 411 PANTHER PTHR23501 24 405 6.5E-89 T 19-04-2016 APA12_RS10455 3a0f9a1c73a32ea65ee28fb463ad8a5b 411 Gene3D G3DSA:1.20.1250.20 219 395 1.7E-12 T 19-04-2016 APA12_RS10455 3a0f9a1c73a32ea65ee28fb463ad8a5b 411 Gene3D G3DSA:1.20.1250.20 25 207 1.4E-28 T 19-04-2016 APA12_RS10455 3a0f9a1c73a32ea65ee28fb463ad8a5b 411 SUPERFAMILY SSF103473 12 396 6.41E-59 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS10455 3a0f9a1c73a32ea65ee28fb463ad8a5b 411 Pfam PF07690 Major Facilitator Superfamily 29 348 1.1E-39 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APA12_RS10455 3a0f9a1c73a32ea65ee28fb463ad8a5b 411 PANTHER PTHR23501:SF4 24 405 6.5E-89 T 19-04-2016 APA12_RS01855 0d73974529316a697665e85ba8e0ea3d 595 Pfam PF00152 tRNA synthetases class II (D, K and N) 122 560 5.3E-92 T 19-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS01855 0d73974529316a697665e85ba8e0ea3d 595 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 4 566 32.076 T 19-04-2016 APA12_RS01855 0d73974529316a697665e85ba8e0ea3d 595 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 5 585 9.4E-177 T 19-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 APA12_RS01855 0d73974529316a697665e85ba8e0ea3d 595 SUPERFAMILY SSF55261 296 422 1.31E-35 T 19-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 APA12_RS01855 0d73974529316a697665e85ba8e0ea3d 595 SUPERFAMILY SSF55681 116 299 1.7E-95 T 19-04-2016 APA12_RS01855 0d73974529316a697665e85ba8e0ea3d 595 SUPERFAMILY SSF55681 427 585 1.7E-95 T 19-04-2016 APA12_RS01855 0d73974529316a697665e85ba8e0ea3d 595 Gene3D G3DSA:2.40.50.140 4 107 9.6E-32 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS01855 0d73974529316a697665e85ba8e0ea3d 595 PANTHER PTHR22594:SF5 372 574 2.7E-200 T 19-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 APA12_RS01855 0d73974529316a697665e85ba8e0ea3d 595 PANTHER PTHR22594:SF5 2 304 2.7E-200 T 19-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 APA12_RS01855 0d73974529316a697665e85ba8e0ea3d 595 PANTHER PTHR22594 372 574 2.7E-200 T 19-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS01855 0d73974529316a697665e85ba8e0ea3d 595 PANTHER PTHR22594 2 304 2.7E-200 T 19-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS01855 0d73974529316a697665e85ba8e0ea3d 595 Gene3D G3DSA:3.30.930.10 416 586 1.0E-99 T 19-04-2016 APA12_RS01855 0d73974529316a697665e85ba8e0ea3d 595 Gene3D G3DSA:3.30.930.10 136 283 1.0E-99 T 19-04-2016 APA12_RS01855 0d73974529316a697665e85ba8e0ea3d 595 Gene3D G3DSA:3.30.1360.30 284 415 2.7E-43 T 19-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 APA12_RS01855 0d73974529316a697665e85ba8e0ea3d 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 194 206 3.0E-20 T 19-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS01855 0d73974529316a697665e85ba8e0ea3d 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 211 224 3.0E-20 T 19-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS01855 0d73974529316a697665e85ba8e0ea3d 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 521 535 3.0E-20 T 19-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS01855 0d73974529316a697665e85ba8e0ea3d 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 477 493 3.0E-20 T 19-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS01855 0d73974529316a697665e85ba8e0ea3d 595 SUPERFAMILY SSF50249 4 107 1.71E-27 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS01855 0d73974529316a697665e85ba8e0ea3d 595 Pfam PF01336 OB-fold nucleic acid binding domain 23 100 6.5E-15 T 19-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 APA12_RS01855 0d73974529316a697665e85ba8e0ea3d 595 Pfam PF02938 GAD domain 315 405 1.1E-17 T 19-04-2016 IPR029351 GAD domain APA12_RS10965 53997c6e2bb17018c70c4f342158058b 470 Pfam PF00155 Aminotransferase class I and II 135 453 3.1E-31 T 19-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APA12_RS10965 53997c6e2bb17018c70c4f342158058b 470 Gene3D G3DSA:3.40.640.10 145 352 1.4E-57 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APA12_RS10965 53997c6e2bb17018c70c4f342158058b 470 SMART SM00345 23 82 2.4E-9 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APA12_RS10965 53997c6e2bb17018c70c4f342158058b 470 SUPERFAMILY SSF53383 98 466 7.15E-72 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APA12_RS10965 53997c6e2bb17018c70c4f342158058b 470 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 82 9.5E-12 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APA12_RS10965 53997c6e2bb17018c70c4f342158058b 470 PANTHER PTHR11751 86 465 6.2E-68 T 19-04-2016 APA12_RS10965 53997c6e2bb17018c70c4f342158058b 470 Gene3D G3DSA:1.10.10.10 12 82 3.5E-19 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS10965 53997c6e2bb17018c70c4f342158058b 470 Gene3D G3DSA:3.90.1150.10 353 453 3.8E-5 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APA12_RS10965 53997c6e2bb17018c70c4f342158058b 470 SUPERFAMILY SSF46785 15 91 4.49E-15 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS10965 53997c6e2bb17018c70c4f342158058b 470 PANTHER PTHR11751:SF386 86 465 6.2E-68 T 19-04-2016 APA12_RS08785 398cf2550945134d693a8d1aa6a89c70 586 Pfam PF00733 Asparagine synthase 237 568 2.1E-73 T 19-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 APA12_RS08785 398cf2550945134d693a8d1aa6a89c70 586 Pfam PF13537 Glutamine amidotransferase domain 48 161 5.8E-30 T 19-04-2016 IPR017932 Glutamine amidotransferase type 2 domain APA12_RS08785 398cf2550945134d693a8d1aa6a89c70 586 PIRSF PIRSF001589 1 580 1.6E-145 T 19-04-2016 APA12_RS08785 398cf2550945134d693a8d1aa6a89c70 586 PANTHER PTHR11772 419 530 4.9E-108 T 19-04-2016 APA12_RS08785 398cf2550945134d693a8d1aa6a89c70 586 PANTHER PTHR11772 2 381 4.9E-108 T 19-04-2016 APA12_RS08785 398cf2550945134d693a8d1aa6a89c70 586 PANTHER PTHR11772:SF10 419 530 4.9E-108 T 19-04-2016 APA12_RS08785 398cf2550945134d693a8d1aa6a89c70 586 PANTHER PTHR11772:SF10 2 381 4.9E-108 T 19-04-2016 APA12_RS08785 398cf2550945134d693a8d1aa6a89c70 586 SUPERFAMILY SSF56235 1 211 6.95E-44 T 19-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APA12_RS08785 398cf2550945134d693a8d1aa6a89c70 586 Gene3D G3DSA:3.40.50.620 228 375 1.9E-67 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS08785 398cf2550945134d693a8d1aa6a89c70 586 Gene3D G3DSA:3.40.50.620 422 568 1.9E-67 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS08785 398cf2550945134d693a8d1aa6a89c70 586 Gene3D G3DSA:3.60.20.10 1 215 8.9E-50 T 19-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APA12_RS08785 398cf2550945134d693a8d1aa6a89c70 586 SUPERFAMILY SSF52402 424 566 5.24E-60 T 19-04-2016 APA12_RS08785 398cf2550945134d693a8d1aa6a89c70 586 SUPERFAMILY SSF52402 226 377 5.24E-60 T 19-04-2016 APA12_RS08785 398cf2550945134d693a8d1aa6a89c70 586 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 493 1.0E-109 T 19-04-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 APA12_RS08555 7c4ad18263797a20d6792906733283df 171 Pfam PF01037 Lrp/AsnC ligand binding domain 81 149 2.7E-13 T 19-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APA12_RS08555 7c4ad18263797a20d6792906733283df 171 PANTHER PTHR30154:SF28 6 167 3.1E-43 T 19-04-2016 APA12_RS08555 7c4ad18263797a20d6792906733283df 171 Pfam PF13404 AsnC-type helix-turn-helix domain 14 55 5.9E-18 T 19-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APA12_RS08555 7c4ad18263797a20d6792906733283df 171 SUPERFAMILY SSF54909 74 161 1.47E-13 T 19-04-2016 IPR011008 Dimeric alpha-beta barrel APA12_RS08555 7c4ad18263797a20d6792906733283df 171 PANTHER PTHR30154 6 167 3.1E-43 T 19-04-2016 APA12_RS08555 7c4ad18263797a20d6792906733283df 171 Gene3D G3DSA:3.30.70.920 68 161 7.7E-17 T 19-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APA12_RS08555 7c4ad18263797a20d6792906733283df 171 SMART SM00344 14 123 3.4E-39 T 19-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 APA12_RS08555 7c4ad18263797a20d6792906733283df 171 Gene3D G3DSA:1.10.10.10 15 65 1.9E-24 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS08555 7c4ad18263797a20d6792906733283df 171 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 14 30 2.4E-16 T 19-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APA12_RS08555 7c4ad18263797a20d6792906733283df 171 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 41 60 2.4E-16 T 19-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APA12_RS08555 7c4ad18263797a20d6792906733283df 171 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 41 2.4E-16 T 19-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APA12_RS08555 7c4ad18263797a20d6792906733283df 171 SUPERFAMILY SSF46785 14 74 1.24E-17 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS00345 51bce4e35917944a2d37108130e967ea 330 Pfam PF01618 MotA/TolQ/ExbB proton channel family 187 286 1.6E-31 T 19-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 APA12_RS00345 51bce4e35917944a2d37108130e967ea 330 PANTHER PTHR30625 102 323 4.3E-40 T 19-04-2016 APA12_RS00345 51bce4e35917944a2d37108130e967ea 330 PANTHER PTHR30625:SF3 102 323 4.3E-40 T 19-04-2016 APA12_RS06565 51bce4e35917944a2d37108130e967ea 330 Pfam PF01618 MotA/TolQ/ExbB proton channel family 187 286 1.6E-31 T 19-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 APA12_RS06565 51bce4e35917944a2d37108130e967ea 330 PANTHER PTHR30625 102 323 4.3E-40 T 19-04-2016 APA12_RS06565 51bce4e35917944a2d37108130e967ea 330 PANTHER PTHR30625:SF3 102 323 4.3E-40 T 19-04-2016 APA12_RS04720 0833d0b6c93354cdcf001e6c1f5b8bdc 276 SUPERFAMILY SSF50104 126 272 4.21E-61 T 19-04-2016 IPR008991 Translation protein SH3-like domain APA12_RS04720 0833d0b6c93354cdcf001e6c1f5b8bdc 276 PIRSF PIRSF002158 6 275 5.6E-102 T 19-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04720 0833d0b6c93354cdcf001e6c1f5b8bdc 276 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 19-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 APA12_RS04720 0833d0b6c93354cdcf001e6c1f5b8bdc 276 Gene3D G3DSA:4.10.950.10 196 273 3.7E-34 T 19-04-2016 IPR014726 Ribosomal protein L2, domain 3 APA12_RS04720 0833d0b6c93354cdcf001e6c1f5b8bdc 276 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 4.2E-126 T 19-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 APA12_RS04720 0833d0b6c93354cdcf001e6c1f5b8bdc 276 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 2.2E-57 T 19-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 APA12_RS04720 0833d0b6c93354cdcf001e6c1f5b8bdc 276 SMART SM01382 124 252 6.3E-91 T 19-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 APA12_RS04720 0833d0b6c93354cdcf001e6c1f5b8bdc 276 PANTHER PTHR13691:SF5 1 276 2.1E-139 T 19-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 APA12_RS04720 0833d0b6c93354cdcf001e6c1f5b8bdc 276 SUPERFAMILY SSF50249 2 125 8.57E-48 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS04720 0833d0b6c93354cdcf001e6c1f5b8bdc 276 Gene3D G3DSA:2.40.50.140 1 114 1.8E-49 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS04720 0833d0b6c93354cdcf001e6c1f5b8bdc 276 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 46.468 T 19-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 APA12_RS04720 0833d0b6c93354cdcf001e6c1f5b8bdc 276 PANTHER PTHR13691 1 276 2.1E-139 T 19-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04720 0833d0b6c93354cdcf001e6c1f5b8bdc 276 SMART SM01383 42 118 1.6E-43 T 19-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04720 0833d0b6c93354cdcf001e6c1f5b8bdc 276 Gene3D G3DSA:2.30.30.30 119 195 4.1E-34 T 19-04-2016 IPR014722 Ribosomal protein L2 domain 2 APA12_RS04720 0833d0b6c93354cdcf001e6c1f5b8bdc 276 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 1.3E-31 T 19-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS05565 1a41cfe3f4e079ef75f5a155ac0419dd 201 SUPERFAMILY SSF51391 6 198 9.02E-59 T 19-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APA12_RS05565 1a41cfe3f4e079ef75f5a155ac0419dd 201 Gene3D G3DSA:3.20.20.70 6 200 7.1E-58 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS05565 1a41cfe3f4e079ef75f5a155ac0419dd 201 Pfam PF02581 Thiamine monophosphate synthase/TENI 14 181 4.6E-46 T 19-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APA12_RS05565 1a41cfe3f4e079ef75f5a155ac0419dd 201 PANTHER PTHR20857 1 200 4.3E-44 T 19-04-2016 APA12_RS02365 e53db79020c3c2e39ab36b405e21b1e9 562 Gene3D G3DSA:2.170.16.10 210 358 3.2E-7 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS02365 e53db79020c3c2e39ab36b405e21b1e9 562 Pfam PF13403 Hint domain 212 353 2.1E-43 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS02365 e53db79020c3c2e39ab36b405e21b1e9 562 SUPERFAMILY SSF51294 213 350 3.14E-12 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS07730 7c4c4646ac1e3afb0605e835ddc7c1e9 541 PIRSF PIRSF001892 5 537 4.1E-160 T 19-04-2016 IPR028351 Cyclolysin transport protein CyaE GO:0005215 APA12_RS07730 7c4c4646ac1e3afb0605e835ddc7c1e9 541 Gene3D G3DSA:1.20.1600.10 81 529 7.7E-72 T 19-04-2016 APA12_RS07730 7c4c4646ac1e3afb0605e835ddc7c1e9 541 Pfam PF02321 Outer membrane efflux protein 89 304 6.8E-24 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APA12_RS07730 7c4c4646ac1e3afb0605e835ddc7c1e9 541 Pfam PF02321 Outer membrane efflux protein 330 526 3.8E-19 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APA12_RS07730 7c4c4646ac1e3afb0605e835ddc7c1e9 541 PANTHER PTHR30203:SF8 15 529 4.4E-90 T 19-04-2016 APA12_RS07730 7c4c4646ac1e3afb0605e835ddc7c1e9 541 PANTHER PTHR30203 15 529 4.4E-90 T 19-04-2016 APA12_RS07730 7c4c4646ac1e3afb0605e835ddc7c1e9 541 SUPERFAMILY SSF56954 80 140 1.22E-73 T 19-04-2016 APA12_RS07730 7c4c4646ac1e3afb0605e835ddc7c1e9 541 SUPERFAMILY SSF56954 175 531 1.22E-73 T 19-04-2016 APA12_RS07730 7c4c4646ac1e3afb0605e835ddc7c1e9 541 SUPERFAMILY SSF56954 5 35 1.22E-73 T 19-04-2016 APA12_RS07130 43f91ef5218fe82af6325297b860d6ff 732 Pfam PF07715 TonB-dependent Receptor Plug Domain 77 187 2.1E-12 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS07130 43f91ef5218fe82af6325297b860d6ff 732 Gene3D G3DSA:2.40.170.20 190 731 1.1E-53 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS07130 43f91ef5218fe82af6325297b860d6ff 732 SUPERFAMILY SSF56935 69 731 7.33E-74 T 19-04-2016 APA12_RS07130 43f91ef5218fe82af6325297b860d6ff 732 Gene3D G3DSA:2.170.130.10 69 189 4.1E-17 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS07130 43f91ef5218fe82af6325297b860d6ff 732 PANTHER PTHR32552 68 497 3.5E-15 T 19-04-2016 APA12_RS07130 43f91ef5218fe82af6325297b860d6ff 732 PANTHER PTHR32552 513 731 3.5E-15 T 19-04-2016 APA12_RS07130 43f91ef5218fe82af6325297b860d6ff 732 Pfam PF00593 TonB dependent receptor 464 727 1.9E-21 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS02615 59e09f342b30c48dd3641cf3f71a7bb9 484 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 332 467 2.5E-22 T 19-04-2016 IPR006517 Archaeophage PsiM2, terminase large subunit APA12_RS02615 59e09f342b30c48dd3641cf3f71a7bb9 484 Pfam PF03237 Terminase-like family 72 465 8.3E-37 T 19-04-2016 IPR004921 Terminase, large subunit APA12_RS10975 d2d9e5e660fe7beef124bae9b0812168 422 Gene3D G3DSA:3.30.70.20 317 411 8.9E-20 T 19-04-2016 APA12_RS10975 d2d9e5e660fe7beef124bae9b0812168 422 Gene3D G3DSA:3.20.20.70 4 311 6.7E-78 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS10975 d2d9e5e660fe7beef124bae9b0812168 422 SUPERFAMILY SSF51395 1 321 3.66E-70 T 19-04-2016 APA12_RS10975 d2d9e5e660fe7beef124bae9b0812168 422 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 4 320 1.7E-51 T 19-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 APA12_RS10975 d2d9e5e660fe7beef124bae9b0812168 422 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 381 392 - T 19-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APA12_RS10975 d2d9e5e660fe7beef124bae9b0812168 422 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 345 356 - T 19-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APA12_RS10975 d2d9e5e660fe7beef124bae9b0812168 422 PANTHER PTHR11938:SF102 3 400 2.2E-90 T 19-04-2016 APA12_RS10975 d2d9e5e660fe7beef124bae9b0812168 422 Pfam PF14697 4Fe-4S dicluster domain 338 399 1.4E-23 T 19-04-2016 APA12_RS10975 d2d9e5e660fe7beef124bae9b0812168 422 SUPERFAMILY SSF54862 335 411 1.2E-13 T 19-04-2016 APA12_RS10975 d2d9e5e660fe7beef124bae9b0812168 422 PANTHER PTHR11938 3 400 2.2E-90 T 19-04-2016 APA12_RS10975 d2d9e5e660fe7beef124bae9b0812168 422 Pfam PF01180 Dihydroorotate dehydrogenase 4 305 1.9E-26 T 19-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 APA12_RS06410 ccd5b67e155d3f80fd810a3cbe2f0b97 371 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 369 2.3E-218 T 19-04-2016 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00040+1.1.1.-|KEGG: 00051+1.1.1.-|KEGG: 00071+1.1.1.1|KEGG: 00140+1.1.1.-|KEGG: 00240+1.1.1.-|KEGG: 00253+1.1.1.-|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00362+1.1.1.-|KEGG: 00363+1.1.1.-|KEGG: 00365+1.1.1.-|KEGG: 00400+1.1.1.-|KEGG: 00520+1.1.1.-|KEGG: 00523+1.1.1.-|KEGG: 00591+1.1.1.-|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00622+1.1.1.-|KEGG: 00625+1.1.1.1+1.1.1.-|KEGG: 00626+1.1.1.1|KEGG: 00633+1.1.1.-|KEGG: 00640+1.1.1.-|KEGG: 00650+1.1.1.-|KEGG: 00680+1.1.1.284+1.1.1.-|KEGG: 00720+1.1.1.-|KEGG: 00750+1.1.1.-|KEGG: 00830+1.1.1.1+1.1.1.-|KEGG: 00950+1.1.1.-|KEGG: 00966+1.1.1.-|KEGG: 00980+1.1.1.1|KEGG: 00981+1.1.1.-|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 APA12_RS06410 ccd5b67e155d3f80fd810a3cbe2f0b97 371 Gene3D G3DSA:3.40.50.720 191 308 1.4E-41 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS06410 ccd5b67e155d3f80fd810a3cbe2f0b97 371 PANTHER PTHR11695 128 369 7.6E-211 T 19-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APA12_RS06410 ccd5b67e155d3f80fd810a3cbe2f0b97 371 PANTHER PTHR11695 15 108 7.6E-211 T 19-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APA12_RS06410 ccd5b67e155d3f80fd810a3cbe2f0b97 371 Pfam PF00107 Zinc-binding dehydrogenase 197 329 1.0E-24 T 19-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APA12_RS06410 ccd5b67e155d3f80fd810a3cbe2f0b97 371 PANTHER PTHR11695:SF560 128 369 7.6E-211 T 19-04-2016 APA12_RS06410 ccd5b67e155d3f80fd810a3cbe2f0b97 371 PANTHER PTHR11695:SF560 15 108 7.6E-211 T 19-04-2016 APA12_RS06410 ccd5b67e155d3f80fd810a3cbe2f0b97 371 SUPERFAMILY SSF51735 161 334 7.46E-45 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS06410 ccd5b67e155d3f80fd810a3cbe2f0b97 371 SUPERFAMILY SSF50129 318 369 3.3E-11 T 19-04-2016 IPR011032 GroES-like APA12_RS06410 ccd5b67e155d3f80fd810a3cbe2f0b97 371 SUPERFAMILY SSF50129 1 184 1.1E-70 T 19-04-2016 IPR011032 GroES-like APA12_RS06410 ccd5b67e155d3f80fd810a3cbe2f0b97 371 Gene3D G3DSA:3.90.180.10 2 190 3.8E-67 T 19-04-2016 IPR011032 GroES-like APA12_RS06410 ccd5b67e155d3f80fd810a3cbe2f0b97 371 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 19-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 APA12_RS06410 ccd5b67e155d3f80fd810a3cbe2f0b97 371 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 154 4.1E-26 T 19-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APA12_RS06410 ccd5b67e155d3f80fd810a3cbe2f0b97 371 SMART SM00829 12 367 1.4E-4 T 19-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APA12_RS08970 93a6f5976216f81b77c65bef0e59318a 191 PANTHER PTHR30353 1 142 8.0E-32 T 19-04-2016 IPR032818 DedA family APA12_RS08970 93a6f5976216f81b77c65bef0e59318a 191 PANTHER PTHR30353:SF2 1 142 8.0E-32 T 19-04-2016 APA12_RS08970 93a6f5976216f81b77c65bef0e59318a 191 Pfam PF09335 SNARE associated Golgi protein 15 132 6.5E-14 T 19-04-2016 IPR032816 SNARE associated Golgi protein APA12_RS07970 842e0dd53a856ee460a8464d3b7a11ad 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 2.8E-30 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS07970 842e0dd53a856ee460a8464d3b7a11ad 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 2.8E-30 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS07970 842e0dd53a856ee460a8464d3b7a11ad 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 2.8E-30 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS07970 842e0dd53a856ee460a8464d3b7a11ad 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 2.8E-30 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS07970 842e0dd53a856ee460a8464d3b7a11ad 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 2.8E-30 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS07970 842e0dd53a856ee460a8464d3b7a11ad 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 2.8E-30 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS07970 842e0dd53a856ee460a8464d3b7a11ad 253 Gene3D G3DSA:3.40.50.720 3 252 2.1E-61 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS07970 842e0dd53a856ee460a8464d3b7a11ad 253 SUPERFAMILY SSF51735 6 252 1.53E-60 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS07970 842e0dd53a856ee460a8464d3b7a11ad 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 251 2.7E-45 T 19-04-2016 APA12_RS07970 842e0dd53a856ee460a8464d3b7a11ad 253 PANTHER PTHR24322 9 142 5.1E-30 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS07970 842e0dd53a856ee460a8464d3b7a11ad 253 PANTHER PTHR24322 158 189 5.1E-30 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS00595 7b54796b1334f05b6bde3bd684e18847 194 SUPERFAMILY SSF47928 17 120 1.57E-15 T 19-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain APA12_RS00595 7b54796b1334f05b6bde3bd684e18847 194 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 22 188 1.4E-27 T 19-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APA12_RS00595 7b54796b1334f05b6bde3bd684e18847 194 Hamap MF_01416 ATP synthase subunit delta [atpD]. 15 192 17.217 T 19-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APA12_RS00595 7b54796b1334f05b6bde3bd684e18847 194 PRINTS PR00125 ATP synthase delta subunit signature 19 38 9.5E-25 T 19-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APA12_RS00595 7b54796b1334f05b6bde3bd684e18847 194 PRINTS PR00125 ATP synthase delta subunit signature 150 165 9.5E-25 T 19-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APA12_RS00595 7b54796b1334f05b6bde3bd684e18847 194 PRINTS PR00125 ATP synthase delta subunit signature 89 100 9.5E-25 T 19-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APA12_RS00595 7b54796b1334f05b6bde3bd684e18847 194 PRINTS PR00125 ATP synthase delta subunit signature 100 114 9.5E-25 T 19-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APA12_RS00595 7b54796b1334f05b6bde3bd684e18847 194 PRINTS PR00125 ATP synthase delta subunit signature 165 183 9.5E-25 T 19-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APA12_RS00595 7b54796b1334f05b6bde3bd684e18847 194 Pfam PF00213 ATP synthase delta (OSCP) subunit 20 189 3.7E-41 T 19-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APA12_RS00595 7b54796b1334f05b6bde3bd684e18847 194 PANTHER PTHR11910 18 194 1.4E-44 T 19-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APA12_RS00595 7b54796b1334f05b6bde3bd684e18847 194 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 152 171 - T 19-04-2016 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 APA12_RS00595 7b54796b1334f05b6bde3bd684e18847 194 Gene3D G3DSA:1.10.520.20 17 120 6.3E-16 T 19-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain APA12_RS01445 6eb6a14c95445ea106a9f0b2b5b9d9a6 600 PANTHER PTHR24423 302 597 9.6E-63 T 19-04-2016 APA12_RS01445 6eb6a14c95445ea106a9f0b2b5b9d9a6 600 PANTHER PTHR24423 22 31 9.6E-63 T 19-04-2016 APA12_RS01445 6eb6a14c95445ea106a9f0b2b5b9d9a6 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 517 531 7.7E-12 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS01445 6eb6a14c95445ea106a9f0b2b5b9d9a6 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 535 545 7.7E-12 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS01445 6eb6a14c95445ea106a9f0b2b5b9d9a6 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 581 594 7.7E-12 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS01445 6eb6a14c95445ea106a9f0b2b5b9d9a6 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 570 7.7E-12 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS01445 6eb6a14c95445ea106a9f0b2b5b9d9a6 600 SUPERFAMILY SSF47384 349 429 8.24E-18 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS01445 6eb6a14c95445ea106a9f0b2b5b9d9a6 600 SMART SM00388 365 430 1.1E-16 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS01445 6eb6a14c95445ea106a9f0b2b5b9d9a6 600 SMART SM00387 480 597 3.7E-35 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS01445 6eb6a14c95445ea106a9f0b2b5b9d9a6 600 Pfam PF00672 HAMP domain 289 359 6.1E-11 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APA12_RS01445 6eb6a14c95445ea106a9f0b2b5b9d9a6 600 Gene3D G3DSA:1.10.287.130 356 416 6.5E-16 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS01445 6eb6a14c95445ea106a9f0b2b5b9d9a6 600 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 481 595 4.8E-21 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS01445 6eb6a14c95445ea106a9f0b2b5b9d9a6 600 Pfam PF13755 Sensor N-terminal transmembrane domain 47 104 1.3E-12 T 19-04-2016 IPR025908 Sensor N-terminal transmembrane domain APA12_RS01445 6eb6a14c95445ea106a9f0b2b5b9d9a6 600 SUPERFAMILY SSF55874 420 595 1.31E-36 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS01445 6eb6a14c95445ea106a9f0b2b5b9d9a6 600 Pfam PF00512 His Kinase A (phospho-acceptor) domain 367 429 2.0E-15 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS01445 6eb6a14c95445ea106a9f0b2b5b9d9a6 600 Gene3D G3DSA:3.30.565.10 417 595 8.0E-40 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS01445 6eb6a14c95445ea106a9f0b2b5b9d9a6 600 Pfam PF13756 Stimulus-sensing domain 124 201 3.2E-8 T 19-04-2016 IPR025919 Stimulus-sensing domain APA12_RS13540 08f28bc06d73644e9a6bccd99b009fba 194 Gene3D G3DSA:3.40.50.450 6 179 5.2E-66 T 19-04-2016 APA12_RS13540 08f28bc06d73644e9a6bccd99b009fba 194 SUPERFAMILY SSF102405 5 178 4.73E-57 T 19-04-2016 APA12_RS13540 08f28bc06d73644e9a6bccd99b009fba 194 PANTHER PTHR31223 6 178 2.5E-73 T 19-04-2016 APA12_RS13540 08f28bc06d73644e9a6bccd99b009fba 194 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 7 177 1.2E-59 T 19-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG APA12_RS13540 08f28bc06d73644e9a6bccd99b009fba 194 Pfam PF03641 Possible lysine decarboxylase 50 178 1.4E-39 T 19-04-2016 IPR031100 LOG family APA12_RS05520 85f6cb89c0108a2688f41059fb6f32cc 216 Gene3D G3DSA:2.10.109.10 93 216 7.6E-39 T 19-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain APA12_RS05520 85f6cb89c0108a2688f41059fb6f32cc 216 Gene3D G3DSA:1.10.10.10 2 67 1.1E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS05520 85f6cb89c0108a2688f41059fb6f32cc 216 PANTHER PTHR33516 1 216 3.4E-74 T 19-04-2016 APA12_RS05520 85f6cb89c0108a2688f41059fb6f32cc 216 Pfam PF00717 Peptidase S24-like 132 199 7.0E-13 T 19-04-2016 IPR019759 Peptidase S24/S26A/S26B APA12_RS05520 85f6cb89c0108a2688f41059fb6f32cc 216 SUPERFAMILY SSF46785 2 68 5.94E-17 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS05520 85f6cb89c0108a2688f41059fb6f32cc 216 Pfam PF01726 LexA DNA binding domain 2 63 2.3E-15 T 19-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 APA12_RS05520 85f6cb89c0108a2688f41059fb6f32cc 216 Hamap MF_00015 LexA repressor [lexA]. 1 216 32.838 T 19-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 APA12_RS05520 85f6cb89c0108a2688f41059fb6f32cc 216 SUPERFAMILY SSF51306 92 214 8.89E-33 T 19-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C APA12_RS05520 85f6cb89c0108a2688f41059fb6f32cc 216 PANTHER PTHR33516:SF2 1 216 3.4E-74 T 19-04-2016 APA12_RS05520 85f6cb89c0108a2688f41059fb6f32cc 216 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 169 181 1.1E-9 T 19-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 APA12_RS05520 85f6cb89c0108a2688f41059fb6f32cc 216 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 129 139 1.1E-9 T 19-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 APA12_RS05520 85f6cb89c0108a2688f41059fb6f32cc 216 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 140 151 1.1E-9 T 19-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 APA12_RS05520 85f6cb89c0108a2688f41059fb6f32cc 216 TIGRFAM TIGR00498 lexA: repressor LexA 2 215 2.0E-54 T 19-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 APA12_RS13605 f2f0c4287e167aab67d99ef33ea6a87c 188 SUPERFAMILY SSF53041 1 140 1.7E-43 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APA12_RS13605 f2f0c4287e167aab67d99ef33ea6a87c 188 Pfam PF02796 Helix-turn-helix domain of resolvase 143 184 1.0E-7 T 19-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 APA12_RS13605 f2f0c4287e167aab67d99ef33ea6a87c 188 SMART SM00857 2 141 2.4E-58 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APA12_RS13605 f2f0c4287e167aab67d99ef33ea6a87c 188 PANTHER PTHR30461 3 187 2.3E-56 T 19-04-2016 APA12_RS13605 f2f0c4287e167aab67d99ef33ea6a87c 188 Pfam PF00239 Resolvase, N terminal domain 3 140 3.1E-44 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APA12_RS13605 f2f0c4287e167aab67d99ef33ea6a87c 188 Gene3D G3DSA:3.40.50.1390 1 124 2.6E-41 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APA12_RS13605 f2f0c4287e167aab67d99ef33ea6a87c 188 SUPERFAMILY SSF46689 144 185 9.86E-6 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS13605 f2f0c4287e167aab67d99ef33ea6a87c 188 Gene3D G3DSA:1.10.10.60 143 184 3.1E-12 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS13605 f2f0c4287e167aab67d99ef33ea6a87c 188 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 19-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 APA12_RS13605 f2f0c4287e167aab67d99ef33ea6a87c 188 PANTHER PTHR30461:SF9 3 187 2.3E-56 T 19-04-2016 APA12_RS11125 d237663c586af6192d5ba31b8a2c6d70 270 SUPERFAMILY SSF53850 33 269 2.21E-74 T 19-04-2016 APA12_RS11125 d237663c586af6192d5ba31b8a2c6d70 270 PANTHER PTHR30429 1 270 2.4E-104 T 19-04-2016 IPR004872 Lipoprotein NlpA family APA12_RS11125 d237663c586af6192d5ba31b8a2c6d70 270 Pfam PF03180 NLPA lipoprotein 33 269 2.7E-85 T 19-04-2016 IPR004872 Lipoprotein NlpA family APA12_RS11125 d237663c586af6192d5ba31b8a2c6d70 270 PIRSF PIRSF002854 2 270 1.7E-90 T 19-04-2016 IPR004872 Lipoprotein NlpA family APA12_RS11125 d237663c586af6192d5ba31b8a2c6d70 270 Gene3D G3DSA:3.40.190.10 31 160 1.1E-50 T 19-04-2016 APA12_RS01095 1426ee1c01ccc3f17da05c3d76be9d5a 81 Pfam PF13467 Ribbon-helix-helix domain 6 69 2.6E-25 T 19-04-2016 IPR027373 Ribbon-helix-helix domain APA12_RS06575 f0cf126c5d460c2b5c9a5446774b0866 69 PANTHER PTHR36417 1 69 3.1E-27 T 19-04-2016 APA12_RS06575 f0cf126c5d460c2b5c9a5446774b0866 69 PANTHER PTHR36417:SF2 1 69 3.1E-27 T 19-04-2016 APA12_RS06575 f0cf126c5d460c2b5c9a5446774b0866 69 Pfam PF10262 Rdx family 1 56 3.7E-22 T 19-04-2016 IPR011893 Selenoprotein, Rdx type APA12_RS06575 f0cf126c5d460c2b5c9a5446774b0866 69 Gene3D G3DSA:3.40.30.10 1 69 3.2E-30 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS06575 f0cf126c5d460c2b5c9a5446774b0866 69 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 1 56 2.2E-14 T 19-04-2016 IPR011893 Selenoprotein, Rdx type APA12_RS06575 f0cf126c5d460c2b5c9a5446774b0866 69 SUPERFAMILY SSF52833 1 65 7.16E-19 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS07295 e8cbcf9b416c7fe9a963527a04097106 837 SUPERFAMILY SSF52540 16 196 6.48E-28 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS07295 e8cbcf9b416c7fe9a963527a04097106 837 SUPERFAMILY SSF52540 320 453 6.48E-28 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS07295 e8cbcf9b416c7fe9a963527a04097106 837 Gene3D G3DSA:3.40.50.300 718 835 3.5E-49 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS07295 e8cbcf9b416c7fe9a963527a04097106 837 Gene3D G3DSA:3.40.50.300 9 61 6.8E-45 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS07295 e8cbcf9b416c7fe9a963527a04097106 837 Gene3D G3DSA:3.40.50.300 362 475 6.8E-45 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS07295 e8cbcf9b416c7fe9a963527a04097106 837 Gene3D G3DSA:3.40.50.300 491 552 3.5E-49 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS07295 e8cbcf9b416c7fe9a963527a04097106 837 Pfam PF00005 ABC transporter 504 757 1.3E-7 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS07295 e8cbcf9b416c7fe9a963527a04097106 837 PANTHER PTHR32282 11 544 0.0 T 19-04-2016 APA12_RS07295 e8cbcf9b416c7fe9a963527a04097106 837 PANTHER PTHR32282 571 837 0.0 T 19-04-2016 APA12_RS07295 e8cbcf9b416c7fe9a963527a04097106 837 Gene3D G3DSA:1.20.1580.10 591 717 1.4E-45 T 19-04-2016 APA12_RS07295 e8cbcf9b416c7fe9a963527a04097106 837 ProSitePatterns PS00211 ABC transporters family signature. 727 741 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APA12_RS07295 e8cbcf9b416c7fe9a963527a04097106 837 Gene3D G3DSA:1.20.1580.10 102 156 5.3E-32 T 19-04-2016 APA12_RS07295 e8cbcf9b416c7fe9a963527a04097106 837 Gene3D G3DSA:1.20.1580.10 286 361 5.3E-32 T 19-04-2016 APA12_RS07295 e8cbcf9b416c7fe9a963527a04097106 837 PANTHER PTHR32282:SF4 11 544 0.0 T 19-04-2016 APA12_RS07295 e8cbcf9b416c7fe9a963527a04097106 837 PANTHER PTHR32282:SF4 571 837 0.0 T 19-04-2016 APA12_RS07295 e8cbcf9b416c7fe9a963527a04097106 837 Gene3D G3DSA:1.10.8.280 159 285 1.7E-23 T 19-04-2016 APA12_RS07295 e8cbcf9b416c7fe9a963527a04097106 837 SUPERFAMILY SSF52540 500 542 8.38E-41 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS07295 e8cbcf9b416c7fe9a963527a04097106 837 SUPERFAMILY SSF52540 581 810 8.38E-41 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS12580 fad3334227d8605fb6fd0ca1c6f1fd60 276 Pfam PF00005 ABC transporter 45 201 1.7E-33 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS12580 fad3334227d8605fb6fd0ca1c6f1fd60 276 PANTHER PTHR24220:SF585 31 274 3.4E-127 T 19-04-2016 APA12_RS12580 fad3334227d8605fb6fd0ca1c6f1fd60 276 SUPERFAMILY SSF52540 29 262 1.77E-59 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS12580 fad3334227d8605fb6fd0ca1c6f1fd60 276 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 30 276 3.8E-117 T 19-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 APA12_RS12580 fad3334227d8605fb6fd0ca1c6f1fd60 276 PANTHER PTHR24220 31 274 3.4E-127 T 19-04-2016 APA12_RS12580 fad3334227d8605fb6fd0ca1c6f1fd60 276 ProSitePatterns PS00211 ABC transporters family signature. 173 187 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APA12_RS12580 fad3334227d8605fb6fd0ca1c6f1fd60 276 SMART SM00382 54 264 6.3E-11 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS12580 fad3334227d8605fb6fd0ca1c6f1fd60 276 Gene3D G3DSA:3.40.50.300 21 269 6.9E-72 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS11640 b867424e8dbb8e97c1f9f50c167c9a5c 466 ProSitePatterns PS00217 Sugar transport proteins signature 2. 118 143 - T 19-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APA12_RS11640 b867424e8dbb8e97c1f9f50c167c9a5c 466 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 17 450 5.0E-117 T 19-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APA12_RS11640 b867424e8dbb8e97c1f9f50c167c9a5c 466 Pfam PF00083 Sugar (and other) transporter 24 453 2.3E-109 T 19-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 APA12_RS11640 b867424e8dbb8e97c1f9f50c167c9a5c 466 SUPERFAMILY SSF103473 22 451 1.31E-65 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS11640 b867424e8dbb8e97c1f9f50c167c9a5c 466 PANTHER PTHR23500:SF119 22 465 2.8E-162 T 19-04-2016 APA12_RS11640 b867424e8dbb8e97c1f9f50c167c9a5c 466 Gene3D G3DSA:1.20.1250.20 26 201 1.6E-23 T 19-04-2016 APA12_RS11640 b867424e8dbb8e97c1f9f50c167c9a5c 466 Gene3D G3DSA:1.20.1250.20 254 451 4.9E-17 T 19-04-2016 APA12_RS11640 b867424e8dbb8e97c1f9f50c167c9a5c 466 PANTHER PTHR23500 22 465 2.8E-162 T 19-04-2016 APA12_RS11640 b867424e8dbb8e97c1f9f50c167c9a5c 466 PRINTS PR00171 Sugar transporter signature 30 40 3.6E-21 T 19-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APA12_RS11640 b867424e8dbb8e97c1f9f50c167c9a5c 466 PRINTS PR00171 Sugar transporter signature 355 376 3.6E-21 T 19-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APA12_RS11640 b867424e8dbb8e97c1f9f50c167c9a5c 466 PRINTS PR00171 Sugar transporter signature 113 132 3.6E-21 T 19-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APA12_RS11640 b867424e8dbb8e97c1f9f50c167c9a5c 466 PRINTS PR00171 Sugar transporter signature 378 390 3.6E-21 T 19-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APA12_RS11640 b867424e8dbb8e97c1f9f50c167c9a5c 466 PRINTS PR00171 Sugar transporter signature 266 276 3.6E-21 T 19-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APA12_RS13275 7acb5768f05cf4c5cd960045490491b6 454 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 45 450 1.8E-119 T 19-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 APA12_RS13275 7acb5768f05cf4c5cd960045490491b6 454 Pfam PF04052 TolB amino-terminal domain 53 145 1.1E-16 T 19-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 APA12_RS13275 7acb5768f05cf4c5cd960045490491b6 454 Pfam PF07676 WD40-like Beta Propeller Repeat 342 368 9.8E-4 T 19-04-2016 IPR011659 WD40-like Beta Propeller APA12_RS13275 7acb5768f05cf4c5cd960045490491b6 454 Pfam PF07676 WD40-like Beta Propeller Repeat 298 333 5.9E-12 T 19-04-2016 IPR011659 WD40-like Beta Propeller APA12_RS13275 7acb5768f05cf4c5cd960045490491b6 454 Pfam PF07676 WD40-like Beta Propeller Repeat 259 289 2.6E-5 T 19-04-2016 IPR011659 WD40-like Beta Propeller APA12_RS13275 7acb5768f05cf4c5cd960045490491b6 454 SUPERFAMILY SSF52964 60 177 8.63E-28 T 19-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 APA12_RS13275 7acb5768f05cf4c5cd960045490491b6 454 Hamap MF_00671 Protein TolB [tolB]. 37 449 29.338 T 19-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 APA12_RS13275 7acb5768f05cf4c5cd960045490491b6 454 Gene3D G3DSA:3.40.50.10070 52 167 1.5E-33 T 19-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 APA12_RS13275 7acb5768f05cf4c5cd960045490491b6 454 PANTHER PTHR36842 35 453 2.7E-42 T 19-04-2016 APA12_RS13275 7acb5768f05cf4c5cd960045490491b6 454 SUPERFAMILY SSF69304 172 451 7.98E-56 T 19-04-2016 APA12_RS13275 7acb5768f05cf4c5cd960045490491b6 454 Gene3D G3DSA:2.130.10.10 168 451 3.0E-73 T 19-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APA12_RS10400 af52968cde7191fcb57fd4b313de3887 571 Gene3D G3DSA:3.30.43.10 4 88 3.5E-8 T 19-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 APA12_RS10400 af52968cde7191fcb57fd4b313de3887 571 PIRSF PIRSF000101 3 568 4.0E-280 T 19-04-2016 IPR012256 D-lactate dehydrogenase GO:0004457|GO:0005887|GO:0006089|GO:0050660|GO:0051287 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 APA12_RS10400 af52968cde7191fcb57fd4b313de3887 571 PANTHER PTHR11748:SF82 241 322 3.1E-58 T 19-04-2016 APA12_RS10400 af52968cde7191fcb57fd4b313de3887 571 PANTHER PTHR11748:SF82 6 190 3.1E-58 T 19-04-2016 APA12_RS10400 af52968cde7191fcb57fd4b313de3887 571 PANTHER PTHR11748 241 322 3.1E-58 T 19-04-2016 APA12_RS10400 af52968cde7191fcb57fd4b313de3887 571 Gene3D G3DSA:3.30.70.610 268 309 9.1E-40 T 19-04-2016 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 APA12_RS10400 af52968cde7191fcb57fd4b313de3887 571 Gene3D G3DSA:3.30.70.610 376 433 9.1E-40 T 19-04-2016 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 APA12_RS10400 af52968cde7191fcb57fd4b313de3887 571 SUPERFAMILY SSF56176 9 270 5.14E-67 T 19-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APA12_RS10400 af52968cde7191fcb57fd4b313de3887 571 PANTHER PTHR11748 6 190 3.1E-58 T 19-04-2016 APA12_RS10400 af52968cde7191fcb57fd4b313de3887 571 Gene3D G3DSA:3.30.1370.20 434 517 5.6E-42 T 19-04-2016 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 APA12_RS10400 af52968cde7191fcb57fd4b313de3887 571 Pfam PF01565 FAD binding domain 46 165 2.7E-7 T 19-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 APA12_RS10400 af52968cde7191fcb57fd4b313de3887 571 Pfam PF09330 D-lactate dehydrogenase, membrane binding 277 566 1.9E-141 T 19-04-2016 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 APA12_RS10400 af52968cde7191fcb57fd4b313de3887 571 Gene3D G3DSA:3.30.465.10 106 267 6.7E-77 T 19-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APA12_RS10400 af52968cde7191fcb57fd4b313de3887 571 SUPERFAMILY SSF55103 274 566 5.67E-109 T 19-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 APA12_RS00790 c167edaf66afab20f18c16c700c62b4a 1114 SMART SM00448 918 1029 3.0E-21 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS00790 c167edaf66afab20f18c16c700c62b4a 1114 PANTHER PTHR24423 624 1068 1.2E-105 T 19-04-2016 APA12_RS00790 c167edaf66afab20f18c16c700c62b4a 1114 PANTHER PTHR24423 5 14 1.2E-105 T 19-04-2016 APA12_RS00790 c167edaf66afab20f18c16c700c62b4a 1114 SMART SM00388 672 738 1.1E-15 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS00790 c167edaf66afab20f18c16c700c62b4a 1114 SUPERFAMILY SSF55874 728 893 1.11E-40 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS00790 c167edaf66afab20f18c16c700c62b4a 1114 PRINTS PR00344 Bacterial sensor protein C-terminal signature 821 835 5.7E-10 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS00790 c167edaf66afab20f18c16c700c62b4a 1114 PRINTS PR00344 Bacterial sensor protein C-terminal signature 880 893 5.7E-10 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS00790 c167edaf66afab20f18c16c700c62b4a 1114 PRINTS PR00344 Bacterial sensor protein C-terminal signature 856 874 5.7E-10 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS00790 c167edaf66afab20f18c16c700c62b4a 1114 SMART SM00387 785 896 1.1E-33 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS00790 c167edaf66afab20f18c16c700c62b4a 1114 SUPERFAMILY SSF47384 657 739 1.96E-20 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS00790 c167edaf66afab20f18c16c700c62b4a 1114 Gene3D G3DSA:3.40.50.2300 914 1040 1.4E-24 T 19-04-2016 APA12_RS00790 c167edaf66afab20f18c16c700c62b4a 1114 Gene3D G3DSA:3.30.565.10 724 899 2.6E-41 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS00790 c167edaf66afab20f18c16c700c62b4a 1114 Pfam PF00512 His Kinase A (phospho-acceptor) domain 672 738 4.3E-16 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS00790 c167edaf66afab20f18c16c700c62b4a 1114 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 785 894 4.4E-24 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS00790 c167edaf66afab20f18c16c700c62b4a 1114 Gene3D G3DSA:1.10.287.130 664 723 4.6E-16 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS00790 c167edaf66afab20f18c16c700c62b4a 1114 SUPERFAMILY SSF52172 917 1049 5.83E-26 T 19-04-2016 IPR011006 CheY-like superfamily APA12_RS00790 c167edaf66afab20f18c16c700c62b4a 1114 Pfam PF00072 Response regulator receiver domain 920 1026 1.6E-17 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS08225 acc4d62e8b98dbf92b1242567c1940c7 160 PRINTS PR01011 Glutathione peroxidase family signature 22 39 1.6E-14 T 19-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 APA12_RS08225 acc4d62e8b98dbf92b1242567c1940c7 160 PRINTS PR01011 Glutathione peroxidase family signature 120 129 1.6E-14 T 19-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 APA12_RS08225 acc4d62e8b98dbf92b1242567c1940c7 160 PRINTS PR01011 Glutathione peroxidase family signature 57 73 1.6E-14 T 19-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 APA12_RS08225 acc4d62e8b98dbf92b1242567c1940c7 160 PANTHER PTHR11592 4 159 4.2E-59 T 19-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 APA12_RS08225 acc4d62e8b98dbf92b1242567c1940c7 160 PIRSF PIRSF000303 1 160 5.4E-58 T 19-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 APA12_RS08225 acc4d62e8b98dbf92b1242567c1940c7 160 Gene3D G3DSA:3.40.30.10 4 159 2.3E-53 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS08225 acc4d62e8b98dbf92b1242567c1940c7 160 Pfam PF00255 Glutathione peroxidase 4 110 9.1E-32 T 19-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 APA12_RS08225 acc4d62e8b98dbf92b1242567c1940c7 160 SUPERFAMILY SSF52833 4 158 5.53E-52 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS08225 acc4d62e8b98dbf92b1242567c1940c7 160 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 19-04-2016 IPR029759 Glutathione peroxidase active site APA12_RS08225 acc4d62e8b98dbf92b1242567c1940c7 160 PANTHER PTHR11592:SF40 4 159 4.2E-59 T 19-04-2016 APA12_RS07435 4f6f5eb02dcb039beb1f78fe33c83b3e 338 PANTHER PTHR23406 1 325 4.5E-13 T 19-04-2016 APA12_RS07435 4f6f5eb02dcb039beb1f78fe33c83b3e 338 PIRSF PIRSF000428 31 333 4.1E-74 T 19-04-2016 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 APA12_RS07435 4f6f5eb02dcb039beb1f78fe33c83b3e 338 Pfam PF01515 Phosphate acetyl/butaryl transferase 111 326 5.0E-39 T 19-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 APA12_RS07435 4f6f5eb02dcb039beb1f78fe33c83b3e 338 PANTHER PTHR23406:SF1 1 325 4.5E-13 T 19-04-2016 APA12_RS07435 4f6f5eb02dcb039beb1f78fe33c83b3e 338 Gene3D G3DSA:3.40.50.10750 147 303 6.5E-45 T 19-04-2016 APA12_RS07435 4f6f5eb02dcb039beb1f78fe33c83b3e 338 SUPERFAMILY SSF53659 40 331 4.93E-60 T 19-04-2016 APA12_RS04170 ae95b2b319b3e6ea65f8a366d40feb86 534 SUPERFAMILY SSF56349 186 500 6.77E-26 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APA12_RS04170 ae95b2b319b3e6ea65f8a366d40feb86 534 Pfam PF00589 Phage integrase family 339 501 1.8E-8 T 19-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APA12_RS04170 ae95b2b319b3e6ea65f8a366d40feb86 534 Gene3D G3DSA:1.10.443.10 311 501 2.3E-15 T 19-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APA12_RS04170 ae95b2b319b3e6ea65f8a366d40feb86 534 Gene3D G3DSA:1.10.150.130 227 282 6.2E-4 T 19-04-2016 IPR023109 Integrase/recombinase, N-terminal APA12_RS06480 249a6a53726e8dbfe7ab2a0543ac65ee 413 SUPERFAMILY SSF53383 17 394 7.47E-93 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APA12_RS06480 249a6a53726e8dbfe7ab2a0543ac65ee 413 Gene3D G3DSA:3.40.640.10 30 288 1.6E-61 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APA12_RS06480 249a6a53726e8dbfe7ab2a0543ac65ee 413 PIRSF PIRSF000524 12 412 6.5E-112 T 19-04-2016 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 APA12_RS06480 249a6a53726e8dbfe7ab2a0543ac65ee 413 Pfam PF00266 Aminotransferase class-V 21 357 1.9E-27 T 19-04-2016 IPR000192 Aminotransferase class V domain APA12_RS06480 249a6a53726e8dbfe7ab2a0543ac65ee 413 Gene3D G3DSA:3.90.1150.10 289 397 1.9E-34 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APA12_RS06480 249a6a53726e8dbfe7ab2a0543ac65ee 413 PANTHER PTHR21152 10 232 7.5E-97 T 19-04-2016 APA12_RS06480 249a6a53726e8dbfe7ab2a0543ac65ee 413 PANTHER PTHR21152 248 411 7.5E-97 T 19-04-2016 APA12_RS09090 d802d0ccfef48a0244e5154cc5a8e022 87 SUPERFAMILY SSF46689 1 83 8.06E-15 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS09090 d802d0ccfef48a0244e5154cc5a8e022 87 Pfam PF01527 Transposase 4 71 5.6E-22 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 APA12_RS09090 d802d0ccfef48a0244e5154cc5a8e022 87 PANTHER PTHR33609 2 87 1.0E-34 T 19-04-2016 APA12_RS09090 d802d0ccfef48a0244e5154cc5a8e022 87 Gene3D G3DSA:1.10.10.60 15 84 1.2E-14 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS04115 d802d0ccfef48a0244e5154cc5a8e022 87 SUPERFAMILY SSF46689 1 83 8.06E-15 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS04115 d802d0ccfef48a0244e5154cc5a8e022 87 Pfam PF01527 Transposase 4 71 5.6E-22 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 APA12_RS04115 d802d0ccfef48a0244e5154cc5a8e022 87 PANTHER PTHR33609 2 87 1.0E-34 T 19-04-2016 APA12_RS04115 d802d0ccfef48a0244e5154cc5a8e022 87 Gene3D G3DSA:1.10.10.60 15 84 1.2E-14 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS04255 d802d0ccfef48a0244e5154cc5a8e022 87 SUPERFAMILY SSF46689 1 83 8.06E-15 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS04255 d802d0ccfef48a0244e5154cc5a8e022 87 Pfam PF01527 Transposase 4 71 5.6E-22 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 APA12_RS04255 d802d0ccfef48a0244e5154cc5a8e022 87 PANTHER PTHR33609 2 87 1.0E-34 T 19-04-2016 APA12_RS04255 d802d0ccfef48a0244e5154cc5a8e022 87 Gene3D G3DSA:1.10.10.60 15 84 1.2E-14 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS09525 d802d0ccfef48a0244e5154cc5a8e022 87 SUPERFAMILY SSF46689 1 83 8.06E-15 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS09525 d802d0ccfef48a0244e5154cc5a8e022 87 Pfam PF01527 Transposase 4 71 5.6E-22 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 APA12_RS09525 d802d0ccfef48a0244e5154cc5a8e022 87 PANTHER PTHR33609 2 87 1.0E-34 T 19-04-2016 APA12_RS09525 d802d0ccfef48a0244e5154cc5a8e022 87 Gene3D G3DSA:1.10.10.60 15 84 1.2E-14 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS07260 d802d0ccfef48a0244e5154cc5a8e022 87 SUPERFAMILY SSF46689 1 83 8.06E-15 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS07260 d802d0ccfef48a0244e5154cc5a8e022 87 Pfam PF01527 Transposase 4 71 5.6E-22 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 APA12_RS07260 d802d0ccfef48a0244e5154cc5a8e022 87 PANTHER PTHR33609 2 87 1.0E-34 T 19-04-2016 APA12_RS07260 d802d0ccfef48a0244e5154cc5a8e022 87 Gene3D G3DSA:1.10.10.60 15 84 1.2E-14 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS10650 d802d0ccfef48a0244e5154cc5a8e022 87 SUPERFAMILY SSF46689 1 83 8.06E-15 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS10650 d802d0ccfef48a0244e5154cc5a8e022 87 Pfam PF01527 Transposase 4 71 5.6E-22 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 APA12_RS10650 d802d0ccfef48a0244e5154cc5a8e022 87 PANTHER PTHR33609 2 87 1.0E-34 T 19-04-2016 APA12_RS10650 d802d0ccfef48a0244e5154cc5a8e022 87 Gene3D G3DSA:1.10.10.60 15 84 1.2E-14 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS10610 d802d0ccfef48a0244e5154cc5a8e022 87 SUPERFAMILY SSF46689 1 83 8.06E-15 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS10610 d802d0ccfef48a0244e5154cc5a8e022 87 Pfam PF01527 Transposase 4 71 5.6E-22 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 APA12_RS10610 d802d0ccfef48a0244e5154cc5a8e022 87 PANTHER PTHR33609 2 87 1.0E-34 T 19-04-2016 APA12_RS10610 d802d0ccfef48a0244e5154cc5a8e022 87 Gene3D G3DSA:1.10.10.60 15 84 1.2E-14 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS06290 1275d37f7ff024ba976577a28e5aa81c 470 Pfam PF13403 Hint domain 123 262 2.7E-38 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS06290 1275d37f7ff024ba976577a28e5aa81c 470 SUPERFAMILY SSF51294 123 251 8.89E-8 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS04355 28c18912ae88066eb3fea596e82a515a 327 TIGRFAM TIGR02822 adh_fam_2: zinc-binding alcohol dehydrogenase family protein 11 326 7.1E-104 T 19-04-2016 IPR014187 Alcohol dehydrogenase, zinc-binding type 2 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 APA12_RS04355 28c18912ae88066eb3fea596e82a515a 327 Gene3D G3DSA:3.90.180.10 1 165 3.4E-58 T 19-04-2016 IPR011032 GroES-like APA12_RS04355 28c18912ae88066eb3fea596e82a515a 327 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 19-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 APA12_RS04355 28c18912ae88066eb3fea596e82a515a 327 PANTHER PTHR11695 13 327 8.1E-162 T 19-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APA12_RS04355 28c18912ae88066eb3fea596e82a515a 327 SUPERFAMILY SSF50129 1 181 1.67E-55 T 19-04-2016 IPR011032 GroES-like APA12_RS04355 28c18912ae88066eb3fea596e82a515a 327 PANTHER PTHR11695:SF403 13 327 8.1E-162 T 19-04-2016 APA12_RS04355 28c18912ae88066eb3fea596e82a515a 327 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 132 1.3E-32 T 19-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APA12_RS04355 28c18912ae88066eb3fea596e82a515a 327 Gene3D G3DSA:3.40.50.720 166 288 1.1E-8 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS04355 28c18912ae88066eb3fea596e82a515a 327 SUPERFAMILY SSF51735 138 289 3.42E-22 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS04355 28c18912ae88066eb3fea596e82a515a 327 SMART SM00829 10 325 8.8E-4 T 19-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APA12_RS04775 8a789756b5dd9a47f268733cbdc1d2f2 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 30.165 T 19-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 APA12_RS04775 8a789756b5dd9a47f268733cbdc1d2f2 132 Pfam PF00410 Ribosomal protein S8 5 132 2.4E-45 T 19-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 APA12_RS04775 8a789756b5dd9a47f268733cbdc1d2f2 132 Gene3D G3DSA:3.30.1490.10 76 132 4.0E-26 T 19-04-2016 APA12_RS04775 8a789756b5dd9a47f268733cbdc1d2f2 132 SUPERFAMILY SSF56047 3 132 5.23E-44 T 19-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 APA12_RS04775 8a789756b5dd9a47f268733cbdc1d2f2 132 PANTHER PTHR11758 1 132 9.8E-51 T 19-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 APA12_RS04775 8a789756b5dd9a47f268733cbdc1d2f2 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 19-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 APA12_RS04775 8a789756b5dd9a47f268733cbdc1d2f2 132 Gene3D G3DSA:3.30.1370.30 3 73 1.0E-22 T 19-04-2016 APA12_RS12020 112a9d9c5a43a847c2bf2a16cb4e9c09 545 SUPERFAMILY SSF103473 272 445 7.85E-31 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS12020 112a9d9c5a43a847c2bf2a16cb4e9c09 545 SUPERFAMILY SSF103473 21 217 7.85E-31 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS12020 112a9d9c5a43a847c2bf2a16cb4e9c09 545 SUPERFAMILY SSF103473 505 530 7.85E-31 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS12020 112a9d9c5a43a847c2bf2a16cb4e9c09 545 PANTHER PTHR23501:SF71 20 536 8.0E-84 T 19-04-2016 APA12_RS12020 112a9d9c5a43a847c2bf2a16cb4e9c09 545 PANTHER PTHR23501 20 536 8.0E-84 T 19-04-2016 APA12_RS12020 112a9d9c5a43a847c2bf2a16cb4e9c09 545 Pfam PF07690 Major Facilitator Superfamily 55 435 2.6E-21 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APA12_RS12020 112a9d9c5a43a847c2bf2a16cb4e9c09 545 Gene3D G3DSA:1.20.1250.20 48 213 2.6E-12 T 19-04-2016 APA12_RS12020 112a9d9c5a43a847c2bf2a16cb4e9c09 545 Gene3D G3DSA:1.20.1250.20 283 446 3.8E-4 T 19-04-2016 APA12_RS00120 f5ea480cb4144f8ca4718e5bc320c172 463 PANTHER PTHR11699 1 456 1.1E-244 T 19-04-2016 APA12_RS00120 f5ea480cb4144f8ca4718e5bc320c172 463 Gene3D G3DSA:3.40.605.10 4 244 1.3E-72 T 19-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APA12_RS00120 f5ea480cb4144f8ca4718e5bc320c172 463 SUPERFAMILY SSF53720 3 454 1.7E-138 T 19-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APA12_RS00120 f5ea480cb4144f8ca4718e5bc320c172 463 Gene3D G3DSA:3.40.309.10 245 429 2.6E-56 T 19-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APA12_RS00120 f5ea480cb4144f8ca4718e5bc320c172 463 PANTHER PTHR11699:SF205 1 456 1.1E-244 T 19-04-2016 APA12_RS00120 f5ea480cb4144f8ca4718e5bc320c172 463 Pfam PF00171 Aldehyde dehydrogenase family 3 453 6.7E-136 T 19-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APA12_RS12560 5870726aa8dff8ffbb75b28d86a5ffa1 158 SUPERFAMILY SSF52161 7 145 1.7E-52 T 19-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 APA12_RS12560 5870726aa8dff8ffbb75b28d86a5ffa1 158 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 8 143 2.1E-57 T 19-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 APA12_RS12560 5870726aa8dff8ffbb75b28d86a5ffa1 158 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 16 143 27.617 T 19-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 APA12_RS12560 5870726aa8dff8ffbb75b28d86a5ffa1 158 Gene3D G3DSA:3.90.1180.10 6 143 2.1E-57 T 19-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 APA12_RS12560 5870726aa8dff8ffbb75b28d86a5ffa1 158 PIRSF PIRSF002181 1 157 3.1E-48 T 19-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 APA12_RS12560 5870726aa8dff8ffbb75b28d86a5ffa1 158 Pfam PF00572 Ribosomal protein L13 15 140 6.8E-51 T 19-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 APA12_RS12560 5870726aa8dff8ffbb75b28d86a5ffa1 158 PANTHER PTHR11545 1 143 4.6E-63 T 19-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 APA12_RS01230 618dcaa360ce506789303d99d591d422 616 Pfam PF00702 haloacid dehalogenase-like hydrolase 300 379 3.3E-6 T 19-04-2016 APA12_RS01230 618dcaa360ce506789303d99d591d422 616 TIGRFAM TIGR01686 FkbH: FkbH domain 264 585 5.4E-63 T 19-04-2016 IPR010037 FkbH domain APA12_RS01230 618dcaa360ce506789303d99d591d422 616 Gene3D G3DSA:3.40.50.1000 263 386 1.0E-15 T 19-04-2016 IPR023214 HAD-like domain APA12_RS01230 618dcaa360ce506789303d99d591d422 616 SUPERFAMILY SSF56784 263 388 1.04E-16 T 19-04-2016 IPR023214 HAD-like domain APA12_RS01230 618dcaa360ce506789303d99d591d422 616 TIGRFAM TIGR01681 HAD-SF-IIIC: HAD phosphatase, family IIIC 265 386 5.8E-17 T 19-04-2016 IPR010033 HAD-superfamily phosphatase, subfamily IIIC APA12_RS00810 364edb2e32261ea20f3438daf2e4c851 248 SUPERFAMILY SSF52540 6 246 4.58E-62 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS00810 364edb2e32261ea20f3438daf2e4c851 248 PANTHER PTHR24220:SF366 10 247 1.8E-126 T 19-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD APA12_RS00810 364edb2e32261ea20f3438daf2e4c851 248 Pfam PF00005 ABC transporter 25 178 1.2E-30 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS00810 364edb2e32261ea20f3438daf2e4c851 248 SMART SM00382 33 225 0.0034 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS00810 364edb2e32261ea20f3438daf2e4c851 248 PANTHER PTHR24220 10 247 1.8E-126 T 19-04-2016 APA12_RS00810 364edb2e32261ea20f3438daf2e4c851 248 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 225 247 1.4E-6 T 19-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal APA12_RS00810 364edb2e32261ea20f3438daf2e4c851 248 Gene3D G3DSA:3.40.50.300 5 245 1.5E-66 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS00810 364edb2e32261ea20f3438daf2e4c851 248 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 8 248 4.1E-114 T 19-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD APA12_RS06105 919f9ac5c8228328a064aa69265e3885 658 SUPERFAMILY SSF48435 62 493 9.02E-39 T 19-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 APA12_RS06105 919f9ac5c8228328a064aa69265e3885 658 SUPERFAMILY SSF53955 512 655 6.26E-38 T 19-04-2016 IPR023346 Lysozyme-like domain APA12_RS06105 919f9ac5c8228328a064aa69265e3885 658 Gene3D G3DSA:1.25.20.10 61 391 1.3E-21 T 19-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 APA12_RS06105 919f9ac5c8228328a064aa69265e3885 658 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 520 548 - T 19-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 APA12_RS06105 919f9ac5c8228328a064aa69265e3885 658 Pfam PF01464 Transglycosylase SLT domain 515 617 7.4E-24 T 19-04-2016 IPR008258 Transglycosylase SLT domain 1 APA12_RS06105 919f9ac5c8228328a064aa69265e3885 658 Gene3D G3DSA:1.10.530.10 511 655 3.7E-39 T 19-04-2016 APA12_RS06105 919f9ac5c8228328a064aa69265e3885 658 PANTHER PTHR21666 518 657 3.4E-34 T 19-04-2016 APA12_RS11805 1a7f68014d37688ebc7d8d496977e425 144 PIRSF PIRSF032025 1 144 9.2E-42 T 19-04-2016 IPR008320 Uncharacterised conserved protein UCP032025 APA12_RS11805 1a7f68014d37688ebc7d8d496977e425 144 Pfam PF07370 Protein of unknown function (DUF1489) 4 144 3.8E-47 T 19-04-2016 IPR008320 Uncharacterised conserved protein UCP032025 APA12_RS06425 512b9830c03aa00b47d14b772b211cad 323 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 27 314 1.0E-63 T 19-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 APA12_RS06425 512b9830c03aa00b47d14b772b211cad 323 Gene3D G3DSA:3.40.50.720 26 201 1.5E-30 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS06425 512b9830c03aa00b47d14b772b211cad 323 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 193 314 1.9E-28 T 19-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 APA12_RS06425 512b9830c03aa00b47d14b772b211cad 323 SUPERFAMILY SSF51735 28 158 1.02E-10 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS06425 512b9830c03aa00b47d14b772b211cad 323 SUPERFAMILY SSF48179 193 313 5.1E-29 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APA12_RS06425 512b9830c03aa00b47d14b772b211cad 323 Pfam PF02558 Ketopantoate reductase PanE/ApbA 28 160 1.7E-22 T 19-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 APA12_RS06425 512b9830c03aa00b47d14b772b211cad 323 Gene3D G3DSA:1.10.1040.10 202 313 3.7E-34 T 19-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APA12_RS06425 512b9830c03aa00b47d14b772b211cad 323 PANTHER PTHR21708 22 315 1.4E-47 T 19-04-2016 APA12_RS13325 3b226aff7f22ed17e8e30b697356b06b 306 PANTHER PTHR10657:SF11 43 282 7.8E-42 T 19-04-2016 APA12_RS13325 3b226aff7f22ed17e8e30b697356b06b 306 Gene3D G3DSA:3.10.50.40 152 268 5.4E-42 T 19-04-2016 APA12_RS13325 3b226aff7f22ed17e8e30b697356b06b 306 SUPERFAMILY SSF54534 146 245 9.51E-30 T 19-04-2016 APA12_RS13325 3b226aff7f22ed17e8e30b697356b06b 306 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 182 204 - T 19-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site APA12_RS13325 3b226aff7f22ed17e8e30b697356b06b 306 Pfam PF13616 PPIC-type PPIASE domain 150 246 4.7E-25 T 19-04-2016 APA12_RS13325 3b226aff7f22ed17e8e30b697356b06b 306 SUPERFAMILY SSF109998 45 183 2.16E-20 T 19-04-2016 IPR027304 Trigger factor/SurA domain APA12_RS13325 3b226aff7f22ed17e8e30b697356b06b 306 PANTHER PTHR10657 43 282 7.8E-42 T 19-04-2016 APA12_RS09395 e052d14145596ad50956049468aeccbe 447 SUPERFAMILY SSF55821 18 215 9.61E-83 T 19-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APA12_RS09395 e052d14145596ad50956049468aeccbe 447 PIRSF PIRSF001259 15 442 6.2E-146 T 19-04-2016 APA12_RS09395 e052d14145596ad50956049468aeccbe 447 SUPERFAMILY SSF142695 242 411 3.01E-53 T 19-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 APA12_RS09395 e052d14145596ad50956049468aeccbe 447 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 243 433 6.2E-65 T 19-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 APA12_RS09395 e052d14145596ad50956049468aeccbe 447 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 14 218 40.536 T 19-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APA12_RS09395 e052d14145596ad50956049468aeccbe 447 Gene3D G3DSA:3.90.870.10 17 217 2.0E-93 T 19-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APA12_RS09395 e052d14145596ad50956049468aeccbe 447 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 18 212 4.3E-76 T 19-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APA12_RS09395 e052d14145596ad50956049468aeccbe 447 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 21 212 1.8E-83 T 19-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APA12_RS09395 e052d14145596ad50956049468aeccbe 447 Pfam PF00925 GTP cyclohydrolase II 243 408 1.4E-60 T 19-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 APA12_RS09395 e052d14145596ad50956049468aeccbe 447 PANTHER PTHR21327 236 434 1.1E-202 T 19-04-2016 APA12_RS09395 e052d14145596ad50956049468aeccbe 447 PANTHER PTHR21327 21 217 1.1E-202 T 19-04-2016 APA12_RS09395 e052d14145596ad50956049468aeccbe 447 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 237 435 37.716 T 19-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 APA12_RS01560 b16c47f313fc213a552d20afaabf06d3 384 PANTHER PTHR21535:SF37 14 103 3.5E-58 T 19-04-2016 APA12_RS01560 b16c47f313fc213a552d20afaabf06d3 384 PANTHER PTHR21535:SF37 260 383 3.5E-58 T 19-04-2016 APA12_RS01560 b16c47f313fc213a552d20afaabf06d3 384 PANTHER PTHR21535:SF37 137 198 3.5E-58 T 19-04-2016 APA12_RS01560 b16c47f313fc213a552d20afaabf06d3 384 Gene3D G3DSA:1.20.58.340 304 380 5.5E-27 T 19-04-2016 APA12_RS01560 b16c47f313fc213a552d20afaabf06d3 384 SUPERFAMILY SSF143865 8 108 1.44E-27 T 19-04-2016 APA12_RS01560 b16c47f313fc213a552d20afaabf06d3 384 SUPERFAMILY SSF143865 278 317 1.44E-27 T 19-04-2016 APA12_RS01560 b16c47f313fc213a552d20afaabf06d3 384 SUPERFAMILY SSF143865 143 237 1.44E-27 T 19-04-2016 APA12_RS01560 b16c47f313fc213a552d20afaabf06d3 384 SUPERFAMILY SSF144083 315 378 1.23E-20 T 19-04-2016 APA12_RS01560 b16c47f313fc213a552d20afaabf06d3 384 PANTHER PTHR21535 14 103 3.5E-58 T 19-04-2016 APA12_RS01560 b16c47f313fc213a552d20afaabf06d3 384 PANTHER PTHR21535 260 383 3.5E-58 T 19-04-2016 APA12_RS01560 b16c47f313fc213a552d20afaabf06d3 384 PANTHER PTHR21535 137 198 3.5E-58 T 19-04-2016 APA12_RS01560 b16c47f313fc213a552d20afaabf06d3 384 Gene3D G3DSA:1.20.58.340 150 205 2.6E-5 T 19-04-2016 APA12_RS01560 b16c47f313fc213a552d20afaabf06d3 384 Pfam PF01544 CorA-like Mg2+ transporter protein 276 376 7.2E-31 T 19-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 APA12_RS01560 b16c47f313fc213a552d20afaabf06d3 384 Pfam PF01544 CorA-like Mg2+ transporter protein 14 204 6.9E-12 T 19-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 APA12_RS07495 9745eeb5501dce062c99327fa960a067 306 PIRSF PIRSF018296 4 306 1.7E-71 T 19-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 APA12_RS07495 9745eeb5501dce062c99327fa960a067 306 Gene3D G3DSA:3.90.1670.10 23 305 4.0E-65 T 19-04-2016 IPR024064 FdhE-like APA12_RS07495 9745eeb5501dce062c99327fa960a067 306 PANTHER PTHR37689:SF1 2 306 9.8E-50 T 19-04-2016 APA12_RS07495 9745eeb5501dce062c99327fa960a067 306 TIGRFAM TIGR01562 FdhE: formate dehydrogenase accessory protein FdhE 10 305 2.0E-58 T 19-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 APA12_RS07495 9745eeb5501dce062c99327fa960a067 306 PANTHER PTHR37689 2 306 9.8E-50 T 19-04-2016 APA12_RS07495 9745eeb5501dce062c99327fa960a067 306 Pfam PF04216 Protein involved in formate dehydrogenase formation 19 304 1.8E-82 T 19-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 APA12_RS07495 9745eeb5501dce062c99327fa960a067 306 SUPERFAMILY SSF144020 22 305 2.35E-55 T 19-04-2016 IPR024064 FdhE-like APA12_RS00075 1a6f8983c5801a35670606a02ab855fc 186 PANTHER PTHR11178 1 185 3.7E-92 T 19-04-2016 APA12_RS00075 1a6f8983c5801a35670606a02ab855fc 186 SUPERFAMILY SSF117916 106 185 1.09E-27 T 19-04-2016 APA12_RS00075 1a6f8983c5801a35670606a02ab855fc 186 PANTHER PTHR11178:SF1 1 185 3.7E-92 T 19-04-2016 IPR017065 NFU1 iron-sulfur cluster scaffold homologue GO:0016226 APA12_RS00075 1a6f8983c5801a35670606a02ab855fc 186 SUPERFAMILY SSF110836 1 93 1.15E-27 T 19-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal APA12_RS00075 1a6f8983c5801a35670606a02ab855fc 186 Gene3D G3DSA:3.30.1370.70 1 92 3.2E-30 T 19-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal APA12_RS00075 1a6f8983c5801a35670606a02ab855fc 186 Pfam PF08712 Scaffold protein Nfu/NifU N terminal 3 90 1.4E-29 T 19-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal APA12_RS00075 1a6f8983c5801a35670606a02ab855fc 186 Pfam PF01106 NifU-like domain 117 183 2.1E-28 T 19-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 APA12_RS00075 1a6f8983c5801a35670606a02ab855fc 186 PIRSF PIRSF036773 1 186 7.0E-72 T 19-04-2016 APA12_RS00075 1a6f8983c5801a35670606a02ab855fc 186 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 121 185 4.0E-29 T 19-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 APA12_RS00075 1a6f8983c5801a35670606a02ab855fc 186 SMART SM00932 3 91 1.0E-43 T 19-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal APA12_RS12530 914e34a53bcf0d9bc41efeae21bd271a 133 PANTHER PTHR10374 3 126 9.7E-31 T 19-04-2016 APA12_RS12530 914e34a53bcf0d9bc41efeae21bd271a 133 Gene3D G3DSA:3.10.180.10 3 127 9.0E-30 T 19-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APA12_RS12530 914e34a53bcf0d9bc41efeae21bd271a 133 PANTHER PTHR10374:SF8 3 126 9.7E-31 T 19-04-2016 APA12_RS12530 914e34a53bcf0d9bc41efeae21bd271a 133 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 123 9.5E-11 T 19-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APA12_RS12530 914e34a53bcf0d9bc41efeae21bd271a 133 SUPERFAMILY SSF54593 3 127 8.59E-28 T 19-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APA12_RS01315 c9b146b0094014b6a527181bae2fd2ac 190 Gene3D G3DSA:3.20.20.70 3 186 1.8E-22 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS01315 c9b146b0094014b6a527181bae2fd2ac 190 Pfam PF02581 Thiamine monophosphate synthase/TENI 4 175 2.0E-19 T 19-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APA12_RS01315 c9b146b0094014b6a527181bae2fd2ac 190 SUPERFAMILY SSF51391 3 186 9.68E-25 T 19-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APA12_RS02195 e182a5d5274752bc7afcc817dccab624 361 Gene3D G3DSA:1.10.10.10 300 354 1.5E-9 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS02195 e182a5d5274752bc7afcc817dccab624 361 SMART SM00421 297 354 3.6E-5 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APA12_RS02195 e182a5d5274752bc7afcc817dccab624 361 Pfam PF00196 Bacterial regulatory proteins, luxR family 300 352 1.0E-7 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APA12_RS02195 e182a5d5274752bc7afcc817dccab624 361 SUPERFAMILY SSF46894 298 358 2.31E-10 T 19-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APA12_RS05825 bb682495295f49eec759ff675e56d261 144 PANTHER PTHR33797 1 144 5.7E-57 T 19-04-2016 APA12_RS05825 bb682495295f49eec759ff675e56d261 144 Pfam PF02566 OsmC-like protein 45 136 3.4E-19 T 19-04-2016 IPR003718 OsmC/Ohr family APA12_RS05825 bb682495295f49eec759ff675e56d261 144 Gene3D G3DSA:3.30.300.20 4 142 8.0E-52 T 19-04-2016 IPR015946 K homology domain-like, alpha/beta APA12_RS05825 bb682495295f49eec759ff675e56d261 144 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 5 140 5.7E-60 T 19-04-2016 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 APA12_RS05825 bb682495295f49eec759ff675e56d261 144 PANTHER PTHR33797:SF1 1 144 5.7E-57 T 19-04-2016 APA12_RS05825 bb682495295f49eec759ff675e56d261 144 SUPERFAMILY SSF82784 1 139 4.32E-37 T 19-04-2016 IPR003718 OsmC/Ohr family APA12_RS07470 dfc7541bbc889a644c0bc7edc244400a 203 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 75 2.0E-7 T 19-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APA12_RS07470 dfc7541bbc889a644c0bc7edc244400a 203 PANTHER PTHR11260:SF154 1 197 2.0E-38 T 19-04-2016 APA12_RS07470 dfc7541bbc889a644c0bc7edc244400a 203 SUPERFAMILY SSF52833 2 77 6.08E-14 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS07470 dfc7541bbc889a644c0bc7edc244400a 203 PANTHER PTHR11260 1 197 2.0E-38 T 19-04-2016 APA12_RS07470 dfc7541bbc889a644c0bc7edc244400a 203 Gene3D G3DSA:1.20.1050.10 91 190 1.0E-21 T 19-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APA12_RS07470 dfc7541bbc889a644c0bc7edc244400a 203 Pfam PF14497 Glutathione S-transferase, C-terminal domain 104 198 7.8E-6 T 19-04-2016 IPR004046 Glutathione S-transferase, C-terminal APA12_RS07470 dfc7541bbc889a644c0bc7edc244400a 203 SUPERFAMILY SSF47616 88 201 3.13E-16 T 19-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APA12_RS07470 dfc7541bbc889a644c0bc7edc244400a 203 Gene3D G3DSA:3.40.30.10 2 90 2.1E-21 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS04860 afaa3c581ddd774d202620dac0b6ab37 521 PANTHER PTHR30203 2 512 1.4E-98 T 19-04-2016 APA12_RS04860 afaa3c581ddd774d202620dac0b6ab37 521 Gene3D G3DSA:1.20.1600.10 68 496 5.3E-96 T 19-04-2016 APA12_RS04860 afaa3c581ddd774d202620dac0b6ab37 521 PANTHER PTHR30203:SF7 2 512 1.4E-98 T 19-04-2016 APA12_RS04860 afaa3c581ddd774d202620dac0b6ab37 521 SUPERFAMILY SSF56954 73 496 5.89E-99 T 19-04-2016 APA12_RS04860 afaa3c581ddd774d202620dac0b6ab37 521 SUPERFAMILY SSF56954 8 47 5.89E-99 T 19-04-2016 APA12_RS04860 afaa3c581ddd774d202620dac0b6ab37 521 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 24 493 9.0E-115 T 19-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 APA12_RS04860 afaa3c581ddd774d202620dac0b6ab37 521 Pfam PF02321 Outer membrane efflux protein 310 490 4.3E-19 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APA12_RS04860 afaa3c581ddd774d202620dac0b6ab37 521 Pfam PF02321 Outer membrane efflux protein 82 284 3.4E-26 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APA12_RS08190 072e0f05a324b3ca8da6d905665bb2ed 136 SUPERFAMILY SSF81301 39 113 2.58E-11 T 19-04-2016 APA12_RS08190 072e0f05a324b3ca8da6d905665bb2ed 136 Gene3D G3DSA:3.30.460.10 39 134 1.2E-13 T 19-04-2016 APA12_RS08190 072e0f05a324b3ca8da6d905665bb2ed 136 Pfam PF01909 Nucleotidyltransferase domain 48 86 1.5E-8 T 19-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 APA12_RS05270 7a4978a2de89415775ba8278fded1460 306 PANTHER PTHR18895:SF3 10 297 3.9E-49 T 19-04-2016 APA12_RS05270 7a4978a2de89415775ba8278fded1460 306 Gene3D G3DSA:3.40.50.150 127 292 3.2E-36 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS05270 7a4978a2de89415775ba8278fded1460 306 SUPERFAMILY SSF53335 96 296 6.07E-38 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS05270 7a4978a2de89415775ba8278fded1460 306 PANTHER PTHR18895 10 297 3.9E-49 T 19-04-2016 APA12_RS05270 7a4978a2de89415775ba8278fded1460 306 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 51 297 5.7E-57 T 19-04-2016 APA12_RS05270 7a4978a2de89415775ba8278fded1460 306 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 12 297 26.613 T 19-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 APA12_RS05335 1064a50705b7789609b341b66655f79e 316 Gene3D G3DSA:1.20.1640.10 101 304 4.2E-30 T 19-04-2016 APA12_RS05335 1064a50705b7789609b341b66655f79e 316 Pfam PF07549 SecD/SecF GG Motif 38 64 9.3E-7 T 19-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site APA12_RS05335 1064a50705b7789609b341b66655f79e 316 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 16 300 26.079 T 19-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 APA12_RS05335 1064a50705b7789609b341b66655f79e 316 PANTHER PTHR30081 7 296 7.6E-62 T 19-04-2016 APA12_RS05335 1064a50705b7789609b341b66655f79e 316 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 123 286 2.3E-50 T 19-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APA12_RS05335 1064a50705b7789609b341b66655f79e 316 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 44 289 9.8E-76 T 19-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 APA12_RS05335 1064a50705b7789609b341b66655f79e 316 SUPERFAMILY SSF82866 84 300 2.09E-39 T 19-04-2016 APA12_RS05335 1064a50705b7789609b341b66655f79e 316 Pfam PF02355 Protein export membrane protein 114 298 6.6E-63 T 19-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial APA12_RS05335 1064a50705b7789609b341b66655f79e 316 PRINTS PR01755 Bacterial translocase SecF protein signature 43 58 3.4E-28 T 19-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APA12_RS05335 1064a50705b7789609b341b66655f79e 316 PRINTS PR01755 Bacterial translocase SecF protein signature 237 252 3.4E-28 T 19-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APA12_RS05335 1064a50705b7789609b341b66655f79e 316 PRINTS PR01755 Bacterial translocase SecF protein signature 157 171 3.4E-28 T 19-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APA12_RS05335 1064a50705b7789609b341b66655f79e 316 PRINTS PR01755 Bacterial translocase SecF protein signature 205 223 3.4E-28 T 19-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APA12_RS07305 d78964efb5286caa303ab1401bb4f9f4 213 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 1 212 38.402 T 19-04-2016 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67 APA12_RS07305 d78964efb5286caa303ab1401bb4f9f4 213 PANTHER PTHR10259 1 189 1.6E-70 T 19-04-2016 APA12_RS07305 d78964efb5286caa303ab1401bb4f9f4 213 PANTHER PTHR10259:SF16 1 189 1.6E-70 T 19-04-2016 APA12_RS07305 d78964efb5286caa303ab1401bb4f9f4 213 SUPERFAMILY SSF53335 1 197 2.92E-48 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS07305 d78964efb5286caa303ab1401bb4f9f4 213 Gene3D G3DSA:3.40.50.150 16 203 1.9E-52 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS07305 d78964efb5286caa303ab1401bb4f9f4 213 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 4 211 2.1E-79 T 19-04-2016 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 APA12_RS07305 d78964efb5286caa303ab1401bb4f9f4 213 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 1 193 2.3E-64 T 19-04-2016 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67 APA12_RS07305 d78964efb5286caa303ab1401bb4f9f4 213 PIRSF PIRSF023956 1 213 1.0E-80 T 19-04-2016 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67 APA12_RS05070 ecfd6bb083ee3d86632346d739540a8c 239 Pfam PF07729 FCD domain 99 218 1.9E-14 T 19-04-2016 IPR011711 GntR, C-terminal APA12_RS05070 ecfd6bb083ee3d86632346d739540a8c 239 Gene3D G3DSA:1.10.10.10 11 87 1.2E-14 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS05070 ecfd6bb083ee3d86632346d739540a8c 239 SMART SM00345 29 87 6.4E-8 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APA12_RS05070 ecfd6bb083ee3d86632346d739540a8c 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 28 87 1.9E-11 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APA12_RS05070 ecfd6bb083ee3d86632346d739540a8c 239 SMART SM00895 97 222 4.5E-8 T 19-04-2016 IPR011711 GntR, C-terminal APA12_RS05070 ecfd6bb083ee3d86632346d739540a8c 239 Gene3D G3DSA:1.20.120.530 95 233 9.3E-16 T 19-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APA12_RS05070 ecfd6bb083ee3d86632346d739540a8c 239 SUPERFAMILY SSF48008 96 229 3.92E-16 T 19-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APA12_RS05070 ecfd6bb083ee3d86632346d739540a8c 239 SUPERFAMILY SSF46785 24 91 1.9E-10 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS03935 7c48e79c6a65389f85f52307c69b487e 165 PANTHER PTHR11995 29 152 1.5E-44 T 19-04-2016 APA12_RS03935 7c48e79c6a65389f85f52307c69b487e 165 SUPERFAMILY SSF56770 26 152 1.83E-43 T 19-04-2016 APA12_RS03935 7c48e79c6a65389f85f52307c69b487e 165 Gene3D G3DSA:3.40.50.700 30 151 2.7E-24 T 19-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 APA12_RS03935 7c48e79c6a65389f85f52307c69b487e 165 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 38 148 4.9E-23 T 19-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 APA12_RS03935 7c48e79c6a65389f85f52307c69b487e 165 PANTHER PTHR11995:SF3 29 152 1.5E-44 T 19-04-2016 APA12_RS05185 809a1b29291762feae917e3c2648ad72 158 Gene3D G3DSA:3.10.20.30 1 73 7.2E-31 T 19-04-2016 IPR012675 Beta-grasp domain APA12_RS05185 809a1b29291762feae917e3c2648ad72 158 Gene3D G3DSA:1.10.150.120 74 154 1.3E-28 T 19-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 APA12_RS05185 809a1b29291762feae917e3c2648ad72 158 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 53 8.7E-9 T 19-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APA12_RS05185 809a1b29291762feae917e3c2648ad72 158 SUPERFAMILY SSF54292 2 77 2.75E-27 T 19-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APA12_RS05185 809a1b29291762feae917e3c2648ad72 158 SUPERFAMILY SSF47741 72 152 2.75E-30 T 19-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 APA12_RS05185 809a1b29291762feae917e3c2648ad72 158 Pfam PF01799 [2Fe-2S] binding domain 72 144 5.0E-24 T 19-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 APA12_RS05185 809a1b29291762feae917e3c2648ad72 158 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 19-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 APA12_RS05185 809a1b29291762feae917e3c2648ad72 158 PANTHER PTHR11908 1 133 1.2E-32 T 19-04-2016 APA12_RS05185 809a1b29291762feae917e3c2648ad72 158 PANTHER PTHR11908:SF66 1 133 1.2E-32 T 19-04-2016 APA12_RS05190 be92364a1f04c71513ba2bad4ea4715c 442 PIRSF PIRSF000018 13 442 4.6E-168 T 19-04-2016 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 APA12_RS05190 be92364a1f04c71513ba2bad4ea4715c 442 Pfam PF00034 Cytochrome c 46 148 4.4E-5 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS05190 be92364a1f04c71513ba2bad4ea4715c 442 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 331 409 9.4E-8 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS05190 be92364a1f04c71513ba2bad4ea4715c 442 SUPERFAMILY SSF46626 332 414 1.92E-14 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS05190 be92364a1f04c71513ba2bad4ea4715c 442 Gene3D G3DSA:1.10.760.10 190 296 2.2E-9 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS05190 be92364a1f04c71513ba2bad4ea4715c 442 Gene3D G3DSA:1.10.760.10 43 147 2.5E-13 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS05190 be92364a1f04c71513ba2bad4ea4715c 442 SUPERFAMILY SSF46626 191 297 7.22E-14 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS05190 be92364a1f04c71513ba2bad4ea4715c 442 SUPERFAMILY SSF46626 26 170 2.83E-22 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS05190 be92364a1f04c71513ba2bad4ea4715c 442 PANTHER PTHR35008:SF2 21 436 2.9E-117 T 19-04-2016 APA12_RS05190 be92364a1f04c71513ba2bad4ea4715c 442 Gene3D G3DSA:1.10.760.10 312 411 1.6E-12 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS05190 be92364a1f04c71513ba2bad4ea4715c 442 PANTHER PTHR35008 21 436 2.9E-117 T 19-04-2016 APA12_RS07895 ace14d6c7b1f060ab445f803bdc9e66a 356 SMART SM00829 9 345 5.4E-5 T 19-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APA12_RS07895 ace14d6c7b1f060ab445f803bdc9e66a 356 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 147 5.7E-26 T 19-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APA12_RS07895 ace14d6c7b1f060ab445f803bdc9e66a 356 Gene3D G3DSA:3.40.50.720 182 295 5.8E-23 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS07895 ace14d6c7b1f060ab445f803bdc9e66a 356 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 19-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 APA12_RS07895 ace14d6c7b1f060ab445f803bdc9e66a 356 PANTHER PTHR11695:SF582 16 356 5.5E-165 T 19-04-2016 APA12_RS07895 ace14d6c7b1f060ab445f803bdc9e66a 356 Gene3D G3DSA:3.90.180.10 3 181 3.8E-59 T 19-04-2016 IPR011032 GroES-like APA12_RS07895 ace14d6c7b1f060ab445f803bdc9e66a 356 PANTHER PTHR11695 16 356 5.5E-165 T 19-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APA12_RS07895 ace14d6c7b1f060ab445f803bdc9e66a 356 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 182 210 - T 19-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 APA12_RS07895 ace14d6c7b1f060ab445f803bdc9e66a 356 SUPERFAMILY SSF51735 152 315 4.05E-42 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS07895 ace14d6c7b1f060ab445f803bdc9e66a 356 Pfam PF00107 Zinc-binding dehydrogenase 189 310 9.1E-23 T 19-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APA12_RS07895 ace14d6c7b1f060ab445f803bdc9e66a 356 SUPERFAMILY SSF50129 12 174 4.56E-47 T 19-04-2016 IPR011032 GroES-like APA12_RS00990 c496e639afc4c34bdf4d93d61b3150a0 292 PANTHER PTHR31480:SF5 16 265 1.2E-57 T 19-04-2016 APA12_RS00990 c496e639afc4c34bdf4d93d61b3150a0 292 Gene3D G3DSA:1.10.600.10 13 273 5.6E-63 T 19-04-2016 IPR008949 Isoprenoid synthase domain APA12_RS00990 c496e639afc4c34bdf4d93d61b3150a0 292 TIGRFAM TIGR03465 HpnD: squalene synthase HpnD 22 282 1.3E-86 T 19-04-2016 IPR017828 Squalene/phytoene synthase HpnD GO:0016117|GO:0016767 APA12_RS00990 c496e639afc4c34bdf4d93d61b3150a0 292 PANTHER PTHR31480 16 265 1.2E-57 T 19-04-2016 APA12_RS00990 c496e639afc4c34bdf4d93d61b3150a0 292 SUPERFAMILY SSF48576 14 290 3.45E-60 T 19-04-2016 IPR008949 Isoprenoid synthase domain APA12_RS00990 c496e639afc4c34bdf4d93d61b3150a0 292 Pfam PF00494 Squalene/phytoene synthase 23 265 3.8E-60 T 19-04-2016 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 APA12_RS00990 c496e639afc4c34bdf4d93d61b3150a0 292 ProSitePatterns PS01044 Squalene and phytoene synthases signature 1. 137 152 - T 19-04-2016 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 APA12_RS00990 c496e639afc4c34bdf4d93d61b3150a0 292 ProSitePatterns PS01045 Squalene and phytoene synthases signature 2. 167 192 - T 19-04-2016 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 APA12_RS06820 967df7d1896a84557efb1506f08793e5 249 Pfam PF01618 MotA/TolQ/ExbB proton channel family 103 205 7.9E-34 T 19-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 APA12_RS06820 967df7d1896a84557efb1506f08793e5 249 PANTHER PTHR30572:SF11 2 246 4.8E-46 T 19-04-2016 APA12_RS06820 967df7d1896a84557efb1506f08793e5 249 PANTHER PTHR30572 2 246 4.8E-46 T 19-04-2016 APA12_RS06820 967df7d1896a84557efb1506f08793e5 249 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 10 219 7.0E-95 T 19-04-2016 IPR014164 TonB-system energizer ExbB type-1 GO:0006810|GO:0016020 APA12_RS13440 b9be7bbbe436d717a201f7763df4703c 258 Gene3D G3DSA:3.20.20.70 5 251 3.2E-102 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS13440 b9be7bbbe436d717a201f7763df4703c 258 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 250 47.664 T 19-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 APA12_RS13440 b9be7bbbe436d717a201f7763df4703c 258 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 250 7.1E-105 T 19-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 APA12_RS13440 b9be7bbbe436d717a201f7763df4703c 258 PANTHER PTHR21235:SF2 1 253 1.4E-119 T 19-04-2016 APA12_RS13440 b9be7bbbe436d717a201f7763df4703c 258 SUPERFAMILY SSF51366 1 250 1.18E-81 T 19-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APA12_RS13440 b9be7bbbe436d717a201f7763df4703c 258 PANTHER PTHR21235 1 253 1.4E-119 T 19-04-2016 APA12_RS13440 b9be7bbbe436d717a201f7763df4703c 258 Pfam PF00977 Histidine biosynthesis protein 5 234 1.8E-87 T 19-04-2016 IPR006062 Histidine biosynthesis GO:0000105 APA12_RS05155 657bc0cb5bc01c91435f8c9ebaf31d58 616 PRINTS PR00344 Bacterial sensor protein C-terminal signature 565 583 4.4E-16 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS05155 657bc0cb5bc01c91435f8c9ebaf31d58 616 PRINTS PR00344 Bacterial sensor protein C-terminal signature 534 548 4.4E-16 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS05155 657bc0cb5bc01c91435f8c9ebaf31d58 616 PRINTS PR00344 Bacterial sensor protein C-terminal signature 590 603 4.4E-16 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS05155 657bc0cb5bc01c91435f8c9ebaf31d58 616 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 562 4.4E-16 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS05155 657bc0cb5bc01c91435f8c9ebaf31d58 616 Gene3D G3DSA:3.40.50.2300 189 316 8.6E-9 T 19-04-2016 APA12_RS05155 657bc0cb5bc01c91435f8c9ebaf31d58 616 SUPERFAMILY SSF52172 189 307 2.42E-8 T 19-04-2016 IPR011006 CheY-like superfamily APA12_RS05155 657bc0cb5bc01c91435f8c9ebaf31d58 616 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 482 604 9.7E-17 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS05155 657bc0cb5bc01c91435f8c9ebaf31d58 616 Gene3D G3DSA:3.40.50.2300 18 139 5.2E-13 T 19-04-2016 APA12_RS05155 657bc0cb5bc01c91435f8c9ebaf31d58 616 SUPERFAMILY SSF55874 422 605 2.1E-34 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS05155 657bc0cb5bc01c91435f8c9ebaf31d58 616 PANTHER PTHR24423 400 509 3.3E-54 T 19-04-2016 APA12_RS05155 657bc0cb5bc01c91435f8c9ebaf31d58 616 PANTHER PTHR24423 338 382 3.3E-54 T 19-04-2016 APA12_RS05155 657bc0cb5bc01c91435f8c9ebaf31d58 616 PANTHER PTHR24423 221 227 3.3E-54 T 19-04-2016 APA12_RS05155 657bc0cb5bc01c91435f8c9ebaf31d58 616 PANTHER PTHR24423 526 609 3.3E-54 T 19-04-2016 APA12_RS05155 657bc0cb5bc01c91435f8c9ebaf31d58 616 Pfam PF00512 His Kinase A (phospho-acceptor) domain 354 436 4.6E-10 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS05155 657bc0cb5bc01c91435f8c9ebaf31d58 616 SUPERFAMILY SSF47384 349 437 4.51E-7 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS05155 657bc0cb5bc01c91435f8c9ebaf31d58 616 Pfam PF00072 Response regulator receiver domain 30 116 7.9E-6 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS05155 657bc0cb5bc01c91435f8c9ebaf31d58 616 Gene3D G3DSA:3.30.565.10 437 604 1.6E-34 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS05155 657bc0cb5bc01c91435f8c9ebaf31d58 616 SMART SM00387 476 606 1.6E-24 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS05155 657bc0cb5bc01c91435f8c9ebaf31d58 616 SUPERFAMILY SSF52172 16 138 7.4E-14 T 19-04-2016 IPR011006 CheY-like superfamily APA12_RS05155 657bc0cb5bc01c91435f8c9ebaf31d58 616 PANTHER PTHR24423:SF497 400 509 3.3E-54 T 19-04-2016 APA12_RS05155 657bc0cb5bc01c91435f8c9ebaf31d58 616 PANTHER PTHR24423:SF497 338 382 3.3E-54 T 19-04-2016 APA12_RS05155 657bc0cb5bc01c91435f8c9ebaf31d58 616 PANTHER PTHR24423:SF497 221 227 3.3E-54 T 19-04-2016 APA12_RS05155 657bc0cb5bc01c91435f8c9ebaf31d58 616 PANTHER PTHR24423:SF497 526 609 3.3E-54 T 19-04-2016 APA12_RS05155 657bc0cb5bc01c91435f8c9ebaf31d58 616 SMART SM00388 354 436 3.9E-4 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS12515 b695e5ce45f5fbb5e1051e26002049f9 309 SMART SM00382 102 253 1.3E-12 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS12515 b695e5ce45f5fbb5e1051e26002049f9 309 PANTHER PTHR11564 1 308 1.5E-122 T 19-04-2016 APA12_RS12515 b695e5ce45f5fbb5e1051e26002049f9 309 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 32 302 1.1E-100 T 19-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 APA12_RS12515 b695e5ce45f5fbb5e1051e26002049f9 309 Pfam PF00448 SRP54-type protein, GTPase domain 103 303 1.7E-71 T 19-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APA12_RS12515 b695e5ce45f5fbb5e1051e26002049f9 309 Gene3D G3DSA:1.20.120.140 34 114 2.5E-25 T 19-04-2016 APA12_RS12515 b695e5ce45f5fbb5e1051e26002049f9 309 SUPERFAMILY SSF52540 101 295 3.92E-51 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS12515 b695e5ce45f5fbb5e1051e26002049f9 309 SMART SM00963 9 88 3.3E-19 T 19-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APA12_RS12515 b695e5ce45f5fbb5e1051e26002049f9 309 Pfam PF02881 SRP54-type protein, helical bundle domain 20 83 6.4E-11 T 19-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APA12_RS12515 b695e5ce45f5fbb5e1051e26002049f9 309 SMART SM00962 103 304 3.7E-112 T 19-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APA12_RS12515 b695e5ce45f5fbb5e1051e26002049f9 309 PANTHER PTHR11564:SF16 1 308 1.5E-122 T 19-04-2016 APA12_RS12515 b695e5ce45f5fbb5e1051e26002049f9 309 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 32 304 59.747 T 19-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 APA12_RS12515 b695e5ce45f5fbb5e1051e26002049f9 309 SUPERFAMILY SSF47364 4 81 4.71E-20 T 19-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APA12_RS12515 b695e5ce45f5fbb5e1051e26002049f9 309 Gene3D G3DSA:3.40.50.300 115 304 1.1E-77 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS10445 5f4b690fa173356dce2cbabf739d1830 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 2.7E-5 T 19-04-2016 APA12_RS10445 5f4b690fa173356dce2cbabf739d1830 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 2.7E-5 T 19-04-2016 APA12_RS10445 5f4b690fa173356dce2cbabf739d1830 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 2.7E-5 T 19-04-2016 APA12_RS10445 5f4b690fa173356dce2cbabf739d1830 430 Gene3D G3DSA:3.50.50.60 2 117 1.5E-19 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS10445 5f4b690fa173356dce2cbabf739d1830 430 SUPERFAMILY SSF51905 2 340 4.98E-29 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS10445 5f4b690fa173356dce2cbabf739d1830 430 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 333 3.0E-51 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS10445 5f4b690fa173356dce2cbabf739d1830 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 114 132 2.0E-12 T 19-04-2016 APA12_RS10445 5f4b690fa173356dce2cbabf739d1830 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 2.0E-12 T 19-04-2016 APA12_RS10445 5f4b690fa173356dce2cbabf739d1830 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 2.0E-12 T 19-04-2016 APA12_RS10445 5f4b690fa173356dce2cbabf739d1830 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.0E-12 T 19-04-2016 APA12_RS10445 5f4b690fa173356dce2cbabf739d1830 430 PANTHER PTHR22912 7 188 1.0E-20 T 19-04-2016 APA12_RS10445 5f4b690fa173356dce2cbabf739d1830 430 PANTHER PTHR22912 206 355 1.0E-20 T 19-04-2016 APA12_RS10445 5f4b690fa173356dce2cbabf739d1830 430 Gene3D G3DSA:3.50.50.60 118 340 1.9E-27 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS11365 9ae407c3865f6e4d8b4042d0f4cbcb69 484 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 19-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 APA12_RS11365 9ae407c3865f6e4d8b4042d0f4cbcb69 484 Gene3D G3DSA:3.40.605.10 7 267 1.1E-88 T 19-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APA12_RS11365 9ae407c3865f6e4d8b4042d0f4cbcb69 484 Pfam PF00171 Aldehyde dehydrogenase family 16 473 1.1E-146 T 19-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APA12_RS11365 9ae407c3865f6e4d8b4042d0f4cbcb69 484 PANTHER PTHR11699 6 473 3.2E-190 T 19-04-2016 APA12_RS11365 9ae407c3865f6e4d8b4042d0f4cbcb69 484 SUPERFAMILY SSF53720 6 475 3.14E-154 T 19-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APA12_RS11365 9ae407c3865f6e4d8b4042d0f4cbcb69 484 Gene3D G3DSA:3.40.309.10 268 451 1.9E-60 T 19-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APA12_RS04395 b361253c9d54d915e199fb31051ec656 288 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 21 103 2.9E-27 T 19-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 APA12_RS04395 b361253c9d54d915e199fb31051ec656 288 SUPERFAMILY SSF51735 117 284 1.08E-38 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS04395 b361253c9d54d915e199fb31051ec656 288 Gene3D G3DSA:3.40.50.720 122 285 1.8E-45 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS04395 b361253c9d54d915e199fb31051ec656 288 PANTHER PTHR21089 12 277 1.1E-87 T 19-04-2016 APA12_RS04395 b361253c9d54d915e199fb31051ec656 288 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 16 285 32.789 T 19-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 APA12_RS04395 b361253c9d54d915e199fb31051ec656 288 SUPERFAMILY SSF53223 11 116 3.28E-33 T 19-04-2016 APA12_RS04395 b361253c9d54d915e199fb31051ec656 288 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 134 205 4.0E-8 T 19-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase APA12_RS04395 b361253c9d54d915e199fb31051ec656 288 Gene3D G3DSA:3.40.192.10 12 121 1.6E-40 T 19-04-2016 APA12_RS04395 b361253c9d54d915e199fb31051ec656 288 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 17 283 1.8E-74 T 19-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 APA12_RS05005 02fa513aede74e5f53ced002992e1e51 663 Pfam PF04546 Sigma-70, non-essential region 168 396 3.6E-44 T 19-04-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS05005 02fa513aede74e5f53ced002992e1e51 663 PANTHER PTHR30603 375 661 2.3E-226 T 19-04-2016 APA12_RS05005 02fa513aede74e5f53ced002992e1e51 663 PANTHER PTHR30603 28 180 2.3E-226 T 19-04-2016 APA12_RS05005 02fa513aede74e5f53ced002992e1e51 663 PANTHER PTHR30603:SF0 375 661 2.3E-226 T 19-04-2016 APA12_RS05005 02fa513aede74e5f53ced002992e1e51 663 PANTHER PTHR30603:SF0 28 180 2.3E-226 T 19-04-2016 APA12_RS05005 02fa513aede74e5f53ced002992e1e51 663 Gene3D G3DSA:1.10.10.10 501 552 2.5E-25 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS05005 02fa513aede74e5f53ced002992e1e51 663 Pfam PF04539 Sigma-70 region 3 507 580 1.8E-28 T 19-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS05005 02fa513aede74e5f53ced002992e1e51 663 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 424 649 1.3E-38 T 19-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS05005 02fa513aede74e5f53ced002992e1e51 663 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 621 647 - T 19-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS05005 02fa513aede74e5f53ced002992e1e51 663 Pfam PF00140 Sigma-70 factor, region 1.2 126 158 2.7E-13 T 19-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS05005 02fa513aede74e5f53ced002992e1e51 663 Gene3D G3DSA:1.10.601.10 34 141 1.4E-5 T 19-04-2016 APA12_RS05005 02fa513aede74e5f53ced002992e1e51 663 Gene3D G3DSA:1.10.601.10 142 497 7.0E-120 T 19-04-2016 APA12_RS05005 02fa513aede74e5f53ced002992e1e51 663 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 424 660 3.3E-120 T 19-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 APA12_RS05005 02fa513aede74e5f53ced002992e1e51 663 PRINTS PR00046 Major sigma-70 factor signature 452 465 3.7E-31 T 19-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS05005 02fa513aede74e5f53ced002992e1e51 663 PRINTS PR00046 Major sigma-70 factor signature 600 612 3.7E-31 T 19-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS05005 02fa513aede74e5f53ced002992e1e51 663 PRINTS PR00046 Major sigma-70 factor signature 621 636 3.7E-31 T 19-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS05005 02fa513aede74e5f53ced002992e1e51 663 PRINTS PR00046 Major sigma-70 factor signature 636 647 3.7E-31 T 19-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS05005 02fa513aede74e5f53ced002992e1e51 663 PRINTS PR00046 Major sigma-70 factor signature 476 484 3.7E-31 T 19-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS05005 02fa513aede74e5f53ced002992e1e51 663 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 452 465 - T 19-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS05005 02fa513aede74e5f53ced002992e1e51 663 SUPERFAMILY SSF88659 558 660 3.14E-26 T 19-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS05005 02fa513aede74e5f53ced002992e1e51 663 Gene3D G3DSA:1.10.10.10 590 661 5.3E-33 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS05005 02fa513aede74e5f53ced002992e1e51 663 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 23 661 43.468 T 19-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 APA12_RS05005 02fa513aede74e5f53ced002992e1e51 663 SUPERFAMILY SSF88659 501 574 7.85E-21 T 19-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS05005 02fa513aede74e5f53ced002992e1e51 663 Pfam PF03979 Sigma-70 factor, region 1.1 23 102 6.3E-24 T 19-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 APA12_RS05005 02fa513aede74e5f53ced002992e1e51 663 SUPERFAMILY SSF88946 143 495 6.91E-93 T 19-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS05005 02fa513aede74e5f53ced002992e1e51 663 Pfam PF04545 Sigma-70, region 4 596 649 2.8E-19 T 19-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS05005 02fa513aede74e5f53ced002992e1e51 663 Pfam PF04542 Sigma-70 region 2 428 497 1.9E-21 T 19-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS13125 e6334d064a5becbcdd61567d06b2a2f1 352 Gene3D G3DSA:3.90.25.10 191 336 4.5E-49 T 19-04-2016 APA12_RS13125 e6334d064a5becbcdd61567d06b2a2f1 352 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 9.1E-86 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS13125 e6334d064a5becbcdd61567d06b2a2f1 352 Gene3D G3DSA:3.40.50.720 1 190 2.9E-59 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS13125 e6334d064a5becbcdd61567d06b2a2f1 352 PANTHER PTHR10366 2 350 1.1E-149 T 19-04-2016 APA12_RS13125 e6334d064a5becbcdd61567d06b2a2f1 352 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 337 2.0E-135 T 19-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 APA12_RS13125 e6334d064a5becbcdd61567d06b2a2f1 352 PANTHER PTHR10366:SF41 2 350 1.1E-149 T 19-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 APA12_RS13125 e6334d064a5becbcdd61567d06b2a2f1 352 SUPERFAMILY SSF51735 1 339 2.9E-88 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS02930 b67b2d71a3c78b6286020de6353c01d6 288 SUPERFAMILY SSF52467 166 287 5.35E-49 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APA12_RS02930 b67b2d71a3c78b6286020de6353c01d6 288 SMART SM00893 4 166 6.0E-17 T 19-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 APA12_RS02930 b67b2d71a3c78b6286020de6353c01d6 288 SUPERFAMILY SSF52402 8 160 1.26E-35 T 19-04-2016 APA12_RS02930 b67b2d71a3c78b6286020de6353c01d6 288 PIRSF PIRSF000089 2 288 2.9E-101 T 19-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 APA12_RS02930 b67b2d71a3c78b6286020de6353c01d6 288 Gene3D G3DSA:3.40.50.1220 164 288 1.7E-61 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APA12_RS02930 b67b2d71a3c78b6286020de6353c01d6 288 PANTHER PTHR10909:SF299 82 287 2.1E-100 T 19-04-2016 APA12_RS02930 b67b2d71a3c78b6286020de6353c01d6 288 PANTHER PTHR10909 82 287 2.1E-100 T 19-04-2016 APA12_RS02930 b67b2d71a3c78b6286020de6353c01d6 288 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 232 258 - T 19-04-2016 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site APA12_RS02930 b67b2d71a3c78b6286020de6353c01d6 288 Gene3D G3DSA:3.40.50.620 9 160 1.2E-42 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS02930 b67b2d71a3c78b6286020de6353c01d6 288 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 169 251 3.5E-36 T 19-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal APA12_RS02930 b67b2d71a3c78b6286020de6353c01d6 288 Pfam PF01012 Electron transfer flavoprotein domain 8 143 1.3E-27 T 19-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 APA12_RS08240 3998837a5d07c53f2dd88edc987e2e1d 438 SUPERFAMILY SSF55681 9 238 3.19E-89 T 19-04-2016 APA12_RS08240 3998837a5d07c53f2dd88edc987e2e1d 438 SUPERFAMILY SSF55681 280 351 3.19E-89 T 19-04-2016 APA12_RS08240 3998837a5d07c53f2dd88edc987e2e1d 438 Pfam PF03129 Anticodon binding domain 349 435 8.1E-15 T 19-04-2016 IPR004154 Anticodon-binding APA12_RS08240 3998837a5d07c53f2dd88edc987e2e1d 438 SUPERFAMILY SSF52954 336 436 7.2E-24 T 19-04-2016 IPR004154 Anticodon-binding APA12_RS08240 3998837a5d07c53f2dd88edc987e2e1d 438 PANTHER PTHR11451:SF3 253 435 1.0E-126 T 19-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APA12_RS08240 3998837a5d07c53f2dd88edc987e2e1d 438 PANTHER PTHR11451:SF3 4 216 1.0E-126 T 19-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APA12_RS08240 3998837a5d07c53f2dd88edc987e2e1d 438 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 223 3.1E-96 T 19-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APA12_RS08240 3998837a5d07c53f2dd88edc987e2e1d 438 Gene3D G3DSA:3.30.930.10 7 204 2.1E-93 T 19-04-2016 APA12_RS08240 3998837a5d07c53f2dd88edc987e2e1d 438 Gene3D G3DSA:3.30.930.10 265 341 2.1E-93 T 19-04-2016 APA12_RS08240 3998837a5d07c53f2dd88edc987e2e1d 438 Hamap MF_01570 Proline--tRNA ligase [proS]. 1 437 61.042 T 19-04-2016 IPR023716 Proline-tRNA ligase, class IIa, type 2 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APA12_RS08240 3998837a5d07c53f2dd88edc987e2e1d 438 PANTHER PTHR11451 253 435 1.0E-126 T 19-04-2016 APA12_RS08240 3998837a5d07c53f2dd88edc987e2e1d 438 PANTHER PTHR11451 4 216 1.0E-126 T 19-04-2016 APA12_RS08240 3998837a5d07c53f2dd88edc987e2e1d 438 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 330 5.0E-32 T 19-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS08240 3998837a5d07c53f2dd88edc987e2e1d 438 Gene3D G3DSA:3.40.50.800 343 434 6.7E-20 T 19-04-2016 IPR004154 Anticodon-binding APA12_RS08240 3998837a5d07c53f2dd88edc987e2e1d 438 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 3.9E-15 T 19-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APA12_RS08240 3998837a5d07c53f2dd88edc987e2e1d 438 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 3.9E-15 T 19-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APA12_RS08240 3998837a5d07c53f2dd88edc987e2e1d 438 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 3.9E-15 T 19-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APA12_RS08240 3998837a5d07c53f2dd88edc987e2e1d 438 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 3.9E-15 T 19-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APA12_RS03590 f2af8671d8e7c0de05ac0055913696de 321 Pfam PF01728 FtsJ-like methyltransferase 152 229 1.0E-6 T 19-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 APA12_RS03590 f2af8671d8e7c0de05ac0055913696de 321 SUPERFAMILY SSF53335 151 247 4.18E-13 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS03590 f2af8671d8e7c0de05ac0055913696de 321 PANTHER PTHR37524 129 304 9.2E-39 T 19-04-2016 APA12_RS03590 f2af8671d8e7c0de05ac0055913696de 321 Gene3D G3DSA:3.40.50.150 151 240 3.3E-12 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS12705 8cfa89b8a19c5d4855f09896d04630c3 201 Gene3D G3DSA:3.30.300.70 18 96 1.4E-25 T 19-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal APA12_RS12705 8cfa89b8a19c5d4855f09896d04630c3 201 SUPERFAMILY SSF75420 16 100 3.27E-20 T 19-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal APA12_RS12705 8cfa89b8a19c5d4855f09896d04630c3 201 Gene3D G3DSA:2.30.30.180 105 166 2.8E-9 T 19-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal APA12_RS12705 8cfa89b8a19c5d4855f09896d04630c3 201 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 22 169 21.887 T 19-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 APA12_RS12705 8cfa89b8a19c5d4855f09896d04630c3 201 Pfam PF02576 Putative ribosome maturation factor RimP 27 165 1.3E-37 T 19-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 APA12_RS12705 8cfa89b8a19c5d4855f09896d04630c3 201 PANTHER PTHR33867:SF1 16 179 4.7E-37 T 19-04-2016 APA12_RS12705 8cfa89b8a19c5d4855f09896d04630c3 201 PANTHER PTHR33867 16 179 4.7E-37 T 19-04-2016 APA12_RS12705 8cfa89b8a19c5d4855f09896d04630c3 201 SUPERFAMILY SSF74942 101 169 4.32E-14 T 19-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal APA12_RS12420 54f04cbf82441151b9669e67c9a55aae 590 SMART SM00671 356 391 60.0 T 19-04-2016 IPR006597 Sel1-like repeat APA12_RS12420 54f04cbf82441151b9669e67c9a55aae 590 SMART SM00671 392 426 0.9 T 19-04-2016 IPR006597 Sel1-like repeat APA12_RS12420 54f04cbf82441151b9669e67c9a55aae 590 SMART SM00671 427 462 1.2E-6 T 19-04-2016 IPR006597 Sel1-like repeat APA12_RS12420 54f04cbf82441151b9669e67c9a55aae 590 SMART SM00671 284 319 1.3E-6 T 19-04-2016 IPR006597 Sel1-like repeat APA12_RS12420 54f04cbf82441151b9669e67c9a55aae 590 SMART SM00671 248 283 0.052 T 19-04-2016 IPR006597 Sel1-like repeat APA12_RS12420 54f04cbf82441151b9669e67c9a55aae 590 SMART SM00671 463 498 3.8E-6 T 19-04-2016 IPR006597 Sel1-like repeat APA12_RS12420 54f04cbf82441151b9669e67c9a55aae 590 SMART SM00671 140 175 0.0062 T 19-04-2016 IPR006597 Sel1-like repeat APA12_RS12420 54f04cbf82441151b9669e67c9a55aae 590 SMART SM00671 499 534 4.7E-5 T 19-04-2016 IPR006597 Sel1-like repeat APA12_RS12420 54f04cbf82441151b9669e67c9a55aae 590 SMART SM00671 48 83 0.0025 T 19-04-2016 IPR006597 Sel1-like repeat APA12_RS12420 54f04cbf82441151b9669e67c9a55aae 590 SMART SM00671 84 139 70.0 T 19-04-2016 IPR006597 Sel1-like repeat APA12_RS12420 54f04cbf82441151b9669e67c9a55aae 590 SMART SM00671 535 570 2.9E-4 T 19-04-2016 IPR006597 Sel1-like repeat APA12_RS12420 54f04cbf82441151b9669e67c9a55aae 590 SMART SM00671 320 355 3.5E-8 T 19-04-2016 IPR006597 Sel1-like repeat APA12_RS12420 54f04cbf82441151b9669e67c9a55aae 590 SMART SM00671 212 247 1.5E-4 T 19-04-2016 IPR006597 Sel1-like repeat APA12_RS12420 54f04cbf82441151b9669e67c9a55aae 590 PANTHER PTHR11102 121 175 7.2E-73 T 19-04-2016 APA12_RS12420 54f04cbf82441151b9669e67c9a55aae 590 Gene3D G3DSA:1.25.40.10 377 577 7.5E-49 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS12420 54f04cbf82441151b9669e67c9a55aae 590 Gene3D G3DSA:1.25.40.10 121 368 1.2E-55 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS12420 54f04cbf82441151b9669e67c9a55aae 590 PANTHER PTHR11102:SF88 212 555 7.2E-73 T 19-04-2016 APA12_RS12420 54f04cbf82441151b9669e67c9a55aae 590 SUPERFAMILY SSF81901 31 245 1.31E-31 T 19-04-2016 APA12_RS12420 54f04cbf82441151b9669e67c9a55aae 590 Pfam PF08238 Sel1 repeat 250 283 6.4E-4 T 19-04-2016 IPR006597 Sel1-like repeat APA12_RS12420 54f04cbf82441151b9669e67c9a55aae 590 Pfam PF08238 Sel1 repeat 326 355 5.8E-7 T 19-04-2016 IPR006597 Sel1-like repeat APA12_RS12420 54f04cbf82441151b9669e67c9a55aae 590 Pfam PF08238 Sel1 repeat 86 109 150.0 T 19-04-2016 IPR006597 Sel1-like repeat APA12_RS12420 54f04cbf82441151b9669e67c9a55aae 590 Pfam PF08238 Sel1 repeat 284 319 3.7E-5 T 19-04-2016 IPR006597 Sel1-like repeat APA12_RS12420 54f04cbf82441151b9669e67c9a55aae 590 Pfam PF08238 Sel1 repeat 429 461 8.0E-8 T 19-04-2016 IPR006597 Sel1-like repeat APA12_RS12420 54f04cbf82441151b9669e67c9a55aae 590 Pfam PF08238 Sel1 repeat 464 498 2.3E-5 T 19-04-2016 IPR006597 Sel1-like repeat APA12_RS12420 54f04cbf82441151b9669e67c9a55aae 590 Pfam PF08238 Sel1 repeat 394 424 0.0022 T 19-04-2016 IPR006597 Sel1-like repeat APA12_RS12420 54f04cbf82441151b9669e67c9a55aae 590 Pfam PF08238 Sel1 repeat 141 174 3.8E-5 T 19-04-2016 IPR006597 Sel1-like repeat APA12_RS12420 54f04cbf82441151b9669e67c9a55aae 590 Pfam PF08238 Sel1 repeat 121 138 1.0 T 19-04-2016 IPR006597 Sel1-like repeat APA12_RS12420 54f04cbf82441151b9669e67c9a55aae 590 Pfam PF08238 Sel1 repeat 537 569 0.0031 T 19-04-2016 IPR006597 Sel1-like repeat APA12_RS12420 54f04cbf82441151b9669e67c9a55aae 590 Pfam PF08238 Sel1 repeat 49 82 0.01 T 19-04-2016 IPR006597 Sel1-like repeat APA12_RS12420 54f04cbf82441151b9669e67c9a55aae 590 Pfam PF08238 Sel1 repeat 500 534 3.3E-5 T 19-04-2016 IPR006597 Sel1-like repeat APA12_RS12420 54f04cbf82441151b9669e67c9a55aae 590 Pfam PF08238 Sel1 repeat 214 245 6.4E-4 T 19-04-2016 IPR006597 Sel1-like repeat APA12_RS12420 54f04cbf82441151b9669e67c9a55aae 590 SUPERFAMILY SSF81901 378 580 1.31E-47 T 19-04-2016 APA12_RS12420 54f04cbf82441151b9669e67c9a55aae 590 Gene3D G3DSA:1.25.40.10 16 117 4.7E-12 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS12420 54f04cbf82441151b9669e67c9a55aae 590 PANTHER PTHR11102:SF88 121 175 7.2E-73 T 19-04-2016 APA12_RS12420 54f04cbf82441151b9669e67c9a55aae 590 SUPERFAMILY SSF81901 237 424 8.46E-42 T 19-04-2016 APA12_RS12420 54f04cbf82441151b9669e67c9a55aae 590 PANTHER PTHR11102 212 555 7.2E-73 T 19-04-2016 APA12_RS03330 a8d454526f3ce8d8d7d61fe26d22bebb 136 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 1 136 30.418 T 19-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 APA12_RS03330 a8d454526f3ce8d8d7d61fe26d22bebb 136 SUPERFAMILY SSF54637 2 134 1.21E-45 T 19-04-2016 IPR029069 HotDog domain APA12_RS03330 a8d454526f3ce8d8d7d61fe26d22bebb 136 Gene3D G3DSA:3.10.129.10 2 134 3.8E-52 T 19-04-2016 IPR029069 HotDog domain APA12_RS03330 a8d454526f3ce8d8d7d61fe26d22bebb 136 Pfam PF07977 FabA-like domain 4 128 9.9E-36 T 19-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 APA12_RS03330 a8d454526f3ce8d8d7d61fe26d22bebb 136 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 1 134 4.7E-54 T 19-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 APA12_RS03330 a8d454526f3ce8d8d7d61fe26d22bebb 136 PANTHER PTHR30272 1 134 1.2E-57 T 19-04-2016 APA12_RS15650 a602521880ddb70d44e0c2a3cc66ef51 138 Gene3D G3DSA:3.40.640.10 1 63 1.3E-22 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APA12_RS15650 a602521880ddb70d44e0c2a3cc66ef51 138 SUPERFAMILY SSF53383 1 134 1.55E-30 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APA12_RS15650 a602521880ddb70d44e0c2a3cc66ef51 138 Pfam PF00155 Aminotransferase class I and II 5 136 3.7E-21 T 19-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APA12_RS15650 a602521880ddb70d44e0c2a3cc66ef51 138 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 28 37 - T 19-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 APA12_RS15650 a602521880ddb70d44e0c2a3cc66ef51 138 PANTHER PTHR13693 1 138 4.2E-58 T 19-04-2016 APA12_RS15650 a602521880ddb70d44e0c2a3cc66ef51 138 Gene3D G3DSA:3.90.1150.10 64 133 4.9E-12 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APA12_RS15650 a602521880ddb70d44e0c2a3cc66ef51 138 PANTHER PTHR13693:SF57 1 138 4.2E-58 T 19-04-2016 APA12_RS12805 70f68c78666c17ce0bb4d13de03b34d0 119 SUPERFAMILY SSF49503 20 115 4.22E-14 T 19-04-2016 IPR008972 Cupredoxin APA12_RS12805 70f68c78666c17ce0bb4d13de03b34d0 119 Pfam PF13473 Cupredoxin-like domain 13 115 6.2E-30 T 19-04-2016 IPR028096 EfeO-type cupredoxin-like domain APA12_RS12805 70f68c78666c17ce0bb4d13de03b34d0 119 Gene3D G3DSA:2.60.40.420 19 114 5.9E-10 T 19-04-2016 IPR008972 Cupredoxin APA12_RS04490 3bcb4c3ee1652eb767643dcec952d28a 339 PANTHER PTHR11767 78 336 3.8E-50 T 19-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 APA12_RS04490 3bcb4c3ee1652eb767643dcec952d28a 339 SUPERFAMILY SSF81324 76 186 3.66E-23 T 19-04-2016 APA12_RS04490 3bcb4c3ee1652eb767643dcec952d28a 339 SUPERFAMILY SSF81296 161 338 1.17E-51 T 19-04-2016 IPR014756 Immunoglobulin E-set APA12_RS04490 3bcb4c3ee1652eb767643dcec952d28a 339 Gene3D G3DSA:2.60.40.1400 170 338 7.0E-44 T 19-04-2016 IPR013518 Potassium channel, inwardly rectifying, Kir, cytoplasmic APA12_RS04490 3bcb4c3ee1652eb767643dcec952d28a 339 Pfam PF01007 Inward rectifier potassium channel 78 338 4.3E-34 T 19-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 APA12_RS04490 3bcb4c3ee1652eb767643dcec952d28a 339 PANTHER PTHR11767:SF58 78 336 3.8E-50 T 19-04-2016 APA12_RS04490 3bcb4c3ee1652eb767643dcec952d28a 339 PRINTS PR01320 Inward rectifier K+ channel superfamily signature 89 115 2.3E-8 T 19-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 APA12_RS04490 3bcb4c3ee1652eb767643dcec952d28a 339 PRINTS PR01320 Inward rectifier K+ channel superfamily signature 280 300 2.3E-8 T 19-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 APA12_RS04490 3bcb4c3ee1652eb767643dcec952d28a 339 PRINTS PR01320 Inward rectifier K+ channel superfamily signature 301 318 2.3E-8 T 19-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 APA12_RS04490 3bcb4c3ee1652eb767643dcec952d28a 339 PRINTS PR01320 Inward rectifier K+ channel superfamily signature 249 267 2.3E-8 T 19-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 APA12_RS04490 3bcb4c3ee1652eb767643dcec952d28a 339 PRINTS PR01320 Inward rectifier K+ channel superfamily signature 326 339 2.3E-8 T 19-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 APA12_RS04490 3bcb4c3ee1652eb767643dcec952d28a 339 Gene3D G3DSA:1.10.287.70 89 169 5.2E-19 T 19-04-2016 APA12_RS06540 f378455b2eb28129a2e1a52e5cc75cef 300 PANTHER PTHR30126 3 292 5.7E-68 T 19-04-2016 APA12_RS06540 f378455b2eb28129a2e1a52e5cc75cef 300 PANTHER PTHR30126:SF34 3 292 5.7E-68 T 19-04-2016 APA12_RS06540 f378455b2eb28129a2e1a52e5cc75cef 300 Gene3D G3DSA:3.40.190.10 186 263 8.9E-10 T 19-04-2016 APA12_RS06540 f378455b2eb28129a2e1a52e5cc75cef 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 5.3E-15 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS06540 f378455b2eb28129a2e1a52e5cc75cef 300 Gene3D G3DSA:1.10.10.10 7 88 3.5E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS06540 f378455b2eb28129a2e1a52e5cc75cef 300 SUPERFAMILY SSF53850 96 296 2.17E-27 T 19-04-2016 APA12_RS06540 f378455b2eb28129a2e1a52e5cc75cef 300 Gene3D G3DSA:3.40.190.10 90 185 4.3E-14 T 19-04-2016 APA12_RS06540 f378455b2eb28129a2e1a52e5cc75cef 300 Pfam PF03466 LysR substrate binding domain 90 290 7.4E-30 T 19-04-2016 IPR005119 LysR, substrate-binding APA12_RS06540 f378455b2eb28129a2e1a52e5cc75cef 300 SUPERFAMILY SSF46785 6 87 5.31E-16 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS08580 6bcfb0641190f8b20b9f5f685a8a8906 417 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 235 400 4.4E-41 T 19-04-2016 IPR005273 Uracil-DNA glycosylase, family 4 domain APA12_RS08580 6bcfb0641190f8b20b9f5f685a8a8906 417 SUPERFAMILY SSF52141 223 404 1.34E-49 T 19-04-2016 IPR005122 Uracil-DNA glycosylase-like APA12_RS08580 6bcfb0641190f8b20b9f5f685a8a8906 417 Pfam PF03167 Uracil DNA glycosylase superfamily 249 401 1.7E-34 T 19-04-2016 IPR005122 Uracil-DNA glycosylase-like APA12_RS08580 6bcfb0641190f8b20b9f5f685a8a8906 417 Gene3D G3DSA:3.40.470.10 224 415 1.0E-58 T 19-04-2016 IPR005122 Uracil-DNA glycosylase-like APA12_RS08580 6bcfb0641190f8b20b9f5f685a8a8906 417 PANTHER PTHR33693:SF3 204 411 3.0E-90 T 19-04-2016 APA12_RS08580 6bcfb0641190f8b20b9f5f685a8a8906 417 SMART SM00986 249 409 1.5E-37 T 19-04-2016 IPR005122 Uracil-DNA glycosylase-like APA12_RS08580 6bcfb0641190f8b20b9f5f685a8a8906 417 PANTHER PTHR33693 204 411 3.0E-90 T 19-04-2016 APA12_RS08580 6bcfb0641190f8b20b9f5f685a8a8906 417 TIGRFAM TIGR03914 UDG_fam_dom: uracil-DNA glycosylase family domain 217 410 5.7E-87 T 19-04-2016 IPR005273 Uracil-DNA glycosylase, family 4 domain APA12_RS08580 6bcfb0641190f8b20b9f5f685a8a8906 417 SMART SM00987 249 409 1.5E-37 T 19-04-2016 APA12_RS12910 cf4a2771c00d108dade375793d376263 364 Gene3D G3DSA:1.10.530.10 49 173 8.5E-30 T 19-04-2016 APA12_RS12910 cf4a2771c00d108dade375793d376263 364 Pfam PF05036 Sporulation related domain 283 363 8.2E-6 T 19-04-2016 IPR007730 Sporulation-related domain GO:0042834 APA12_RS12910 cf4a2771c00d108dade375793d376263 364 SUPERFAMILY SSF53955 41 172 2.81E-28 T 19-04-2016 IPR023346 Lysozyme-like domain APA12_RS12910 cf4a2771c00d108dade375793d376263 364 Pfam PF01464 Transglycosylase SLT domain 53 161 1.7E-18 T 19-04-2016 IPR008258 Transglycosylase SLT domain 1 APA12_RS12910 cf4a2771c00d108dade375793d376263 364 PANTHER PTHR21666 35 151 5.6E-17 T 19-04-2016 APA12_RS03795 705ff722d34d3df9bee5373703ce0812 897 Pfam PF13368 Topoisomerase C-terminal repeat 784 834 8.8E-20 T 19-04-2016 IPR025589 Topoisomerase C-terminal repeat APA12_RS03795 705ff722d34d3df9bee5373703ce0812 897 Pfam PF13368 Topoisomerase C-terminal repeat 662 721 1.4E-13 T 19-04-2016 IPR025589 Topoisomerase C-terminal repeat APA12_RS03795 705ff722d34d3df9bee5373703ce0812 897 Pfam PF13368 Topoisomerase C-terminal repeat 726 775 2.5E-17 T 19-04-2016 IPR025589 Topoisomerase C-terminal repeat APA12_RS03795 705ff722d34d3df9bee5373703ce0812 897 SUPERFAMILY SSF57783 604 641 8.33E-9 T 19-04-2016 APA12_RS03795 705ff722d34d3df9bee5373703ce0812 897 SMART SM00437 249 522 1.2E-113 T 19-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 APA12_RS03795 705ff722d34d3df9bee5373703ce0812 897 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 286 308 - T 19-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 APA12_RS03795 705ff722d34d3df9bee5373703ce0812 897 PANTHER PTHR11390 1 686 0.0 T 19-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APA12_RS03795 705ff722d34d3df9bee5373703ce0812 897 SMART SM00436 107 195 1.1E-42 T 19-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 APA12_RS03795 705ff722d34d3df9bee5373703ce0812 897 Hamap MF_00952 DNA topoisomerase 1 [topA]. 2 738 51.666 T 19-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 APA12_RS03795 705ff722d34d3df9bee5373703ce0812 897 PANTHER PTHR11390:SF27 1 686 0.0 T 19-04-2016 APA12_RS03795 705ff722d34d3df9bee5373703ce0812 897 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 299 308 4.4E-34 T 19-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APA12_RS03795 705ff722d34d3df9bee5373703ce0812 897 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 377 393 4.4E-34 T 19-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APA12_RS03795 705ff722d34d3df9bee5373703ce0812 897 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 165 183 4.4E-34 T 19-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APA12_RS03795 705ff722d34d3df9bee5373703ce0812 897 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 485 499 4.4E-34 T 19-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APA12_RS03795 705ff722d34d3df9bee5373703ce0812 897 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 76 89 4.4E-34 T 19-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APA12_RS03795 705ff722d34d3df9bee5373703ce0812 897 Pfam PF01751 Toprim domain 4 116 2.9E-24 T 19-04-2016 IPR006171 Toprim domain APA12_RS03795 705ff722d34d3df9bee5373703ce0812 897 Gene3D G3DSA:3.40.50.140 2 135 3.7E-42 T 19-04-2016 IPR006171 Toprim domain APA12_RS03795 705ff722d34d3df9bee5373703ce0812 897 Gene3D G3DSA:2.70.20.10 324 461 1.2E-35 T 19-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 APA12_RS03795 705ff722d34d3df9bee5373703ce0812 897 Gene3D G3DSA:2.70.20.10 189 321 2.6E-29 T 19-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 APA12_RS03795 705ff722d34d3df9bee5373703ce0812 897 Pfam PF01131 DNA topoisomerase 131 559 1.0E-120 T 19-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 APA12_RS03795 705ff722d34d3df9bee5373703ce0812 897 SUPERFAMILY SSF56712 604 612 1.15E-182 T 19-04-2016 IPR023405 DNA topoisomerase, type IA, core domain APA12_RS03795 705ff722d34d3df9bee5373703ce0812 897 SUPERFAMILY SSF56712 2 573 1.15E-182 T 19-04-2016 IPR023405 DNA topoisomerase, type IA, core domain APA12_RS03795 705ff722d34d3df9bee5373703ce0812 897 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 605 639 1.9E-14 T 19-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 APA12_RS03795 705ff722d34d3df9bee5373703ce0812 897 Gene3D G3DSA:3.30.65.10 606 640 4.6E-10 T 19-04-2016 APA12_RS03795 705ff722d34d3df9bee5373703ce0812 897 Gene3D G3DSA:1.10.460.10 462 574 3.9E-54 T 19-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 APA12_RS03795 705ff722d34d3df9bee5373703ce0812 897 Gene3D G3DSA:1.10.460.10 136 188 3.9E-54 T 19-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 APA12_RS03795 705ff722d34d3df9bee5373703ce0812 897 SMART SM00493 2 102 6.1E-24 T 19-04-2016 IPR006171 Toprim domain APA12_RS03795 705ff722d34d3df9bee5373703ce0812 897 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 639 2.4E-234 T 19-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 APA12_RS02340 ec0780266b0a16bab5b3296728e5b495 730 Gene3D G3DSA:3.30.365.10 60 183 8.6E-32 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APA12_RS02340 ec0780266b0a16bab5b3296728e5b495 730 Gene3D G3DSA:3.90.1170.50 184 293 1.2E-18 T 19-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APA12_RS02340 ec0780266b0a16bab5b3296728e5b495 730 PANTHER PTHR11908 49 716 8.4E-156 T 19-04-2016 APA12_RS02340 ec0780266b0a16bab5b3296728e5b495 730 SUPERFAMILY SSF56003 35 248 1.81E-36 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APA12_RS02340 ec0780266b0a16bab5b3296728e5b495 730 SMART SM01008 216 296 3.9E-14 T 19-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APA12_RS02340 ec0780266b0a16bab5b3296728e5b495 730 Gene3D G3DSA:3.30.365.10 553 720 1.1E-37 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APA12_RS02340 ec0780266b0a16bab5b3296728e5b495 730 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 593 674 1.2E-14 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APA12_RS02340 ec0780266b0a16bab5b3296728e5b495 730 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 36 205 1.5E-14 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APA12_RS02340 ec0780266b0a16bab5b3296728e5b495 730 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 324 553 3.8E-33 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APA12_RS02340 ec0780266b0a16bab5b3296728e5b495 730 Gene3D G3DSA:3.30.365.10 392 552 3.6E-32 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APA12_RS02340 ec0780266b0a16bab5b3296728e5b495 730 SUPERFAMILY SSF56003 325 721 3.01E-102 T 19-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APA12_RS02340 ec0780266b0a16bab5b3296728e5b495 730 PANTHER PTHR11908:SF2 49 716 8.4E-156 T 19-04-2016 APA12_RS02340 ec0780266b0a16bab5b3296728e5b495 730 PIRSF PIRSF036389 5 727 1.9E-230 T 19-04-2016 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related APA12_RS13165 c4a1fed74a814da2e3ff42a86973acec 223 SUPERFAMILY SSF52833 7 81 1.05E-12 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS13165 c4a1fed74a814da2e3ff42a86973acec 223 Gene3D G3DSA:3.40.30.10 4 95 5.8E-13 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS13165 c4a1fed74a814da2e3ff42a86973acec 223 Gene3D G3DSA:1.20.1050.10 96 210 1.1E-32 T 19-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APA12_RS13165 c4a1fed74a814da2e3ff42a86973acec 223 PANTHER PTHR11260:SF144 1 202 6.8E-42 T 19-04-2016 APA12_RS13165 c4a1fed74a814da2e3ff42a86973acec 223 PANTHER PTHR11260 1 202 6.8E-42 T 19-04-2016 APA12_RS13165 c4a1fed74a814da2e3ff42a86973acec 223 SUPERFAMILY SSF47616 83 206 1.08E-14 T 19-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APA12_RS13165 c4a1fed74a814da2e3ff42a86973acec 223 Pfam PF13409 Glutathione S-transferase, N-terminal domain 14 77 1.6E-9 T 19-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APA12_RS06275 00347eaa4f10d61d4954037c5506dfab 479 PANTHER PTHR30026:SF3 37 465 1.0E-75 T 19-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 APA12_RS06275 00347eaa4f10d61d4954037c5506dfab 479 Pfam PF02321 Outer membrane efflux protein 38 235 4.2E-32 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APA12_RS06275 00347eaa4f10d61d4954037c5506dfab 479 Pfam PF02321 Outer membrane efflux protein 259 439 4.6E-23 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APA12_RS06275 00347eaa4f10d61d4954037c5506dfab 479 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 36 453 1.6E-85 T 19-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 APA12_RS06275 00347eaa4f10d61d4954037c5506dfab 479 SUPERFAMILY SSF56954 2 441 2.35E-78 T 19-04-2016 APA12_RS06275 00347eaa4f10d61d4954037c5506dfab 479 Gene3D G3DSA:1.20.1600.10 33 443 1.4E-71 T 19-04-2016 APA12_RS06275 00347eaa4f10d61d4954037c5506dfab 479 PANTHER PTHR30026 37 465 1.0E-75 T 19-04-2016 APA12_RS09600 640337e079928a825017e9c65281c308 335 Gene3D G3DSA:1.10.150.170 127 228 3.4E-34 T 19-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APA12_RS09600 640337e079928a825017e9c65281c308 335 Pfam PF01795 MraW methylase family 15 324 6.1E-92 T 19-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APA12_RS09600 640337e079928a825017e9c65281c308 335 SUPERFAMILY SSF53335 16 127 1.97E-45 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS09600 640337e079928a825017e9c65281c308 335 SUPERFAMILY SSF53335 226 324 1.97E-45 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS09600 640337e079928a825017e9c65281c308 335 Gene3D G3DSA:3.40.50.150 16 124 1.0E-48 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS09600 640337e079928a825017e9c65281c308 335 Gene3D G3DSA:3.40.50.150 229 324 1.0E-48 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS09600 640337e079928a825017e9c65281c308 335 PIRSF PIRSF004486 10 326 9.1E-99 T 19-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APA12_RS09600 640337e079928a825017e9c65281c308 335 PANTHER PTHR11265 16 327 8.6E-131 T 19-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APA12_RS09600 640337e079928a825017e9c65281c308 335 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 14 324 2.0E-85 T 19-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APA12_RS09600 640337e079928a825017e9c65281c308 335 PANTHER PTHR11265:SF0 16 327 8.6E-131 T 19-04-2016 APA12_RS09600 640337e079928a825017e9c65281c308 335 SUPERFAMILY SSF81799 128 226 6.02E-34 T 19-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APA12_RS09600 640337e079928a825017e9c65281c308 335 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 16 325 35.931 T 19-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APA12_RS07150 7f6d830b7d76ff508786d37a72c8b9d4 387 Gene3D G3DSA:3.20.20.30 10 259 9.4E-104 T 19-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APA12_RS07150 7f6d830b7d76ff508786d37a72c8b9d4 387 Gene3D G3DSA:3.20.20.30 293 356 9.4E-104 T 19-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APA12_RS07150 7f6d830b7d76ff508786d37a72c8b9d4 387 PANTHER PTHR30011 9 385 5.9E-189 T 19-04-2016 APA12_RS07150 7f6d830b7d76ff508786d37a72c8b9d4 387 PANTHER PTHR30011:SF1 9 385 5.9E-189 T 19-04-2016 APA12_RS07150 7f6d830b7d76ff508786d37a72c8b9d4 387 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 10 387 70.838 T 19-04-2016 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 APA12_RS07150 7f6d830b7d76ff508786d37a72c8b9d4 387 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 10 355 1.8E-187 T 19-04-2016 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 APA12_RS07150 7f6d830b7d76ff508786d37a72c8b9d4 387 SUPERFAMILY SSF51679 10 356 5.5E-97 T 19-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APA12_RS07150 7f6d830b7d76ff508786d37a72c8b9d4 387 Pfam PF00296 Luciferase-like monooxygenase 11 331 1.9E-88 T 19-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APA12_RS03060 0bf868b9e74e5ee86541434f38802c7b 552 PANTHER PTHR10617:SF52 79 401 2.1E-152 T 19-04-2016 APA12_RS03060 0bf868b9e74e5ee86541434f38802c7b 552 PANTHER PTHR10617:SF52 481 542 2.1E-152 T 19-04-2016 APA12_RS03060 0bf868b9e74e5ee86541434f38802c7b 552 SUPERFAMILY SSF51905 490 539 5.83E-37 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS03060 0bf868b9e74e5ee86541434f38802c7b 552 SUPERFAMILY SSF51905 109 297 5.83E-37 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS03060 0bf868b9e74e5ee86541434f38802c7b 552 PIRSF PIRSF038984 1 545 3.3E-229 T 19-04-2016 IPR028348 FAD dependent protein APA12_RS03060 0bf868b9e74e5ee86541434f38802c7b 552 Gene3D G3DSA:3.50.50.60 109 299 6.1E-34 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS03060 0bf868b9e74e5ee86541434f38802c7b 552 Gene3D G3DSA:3.50.50.60 474 544 6.1E-34 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS03060 0bf868b9e74e5ee86541434f38802c7b 552 PANTHER PTHR10617 79 401 2.1E-152 T 19-04-2016 APA12_RS03060 0bf868b9e74e5ee86541434f38802c7b 552 PANTHER PTHR10617 481 542 2.1E-152 T 19-04-2016 APA12_RS03060 0bf868b9e74e5ee86541434f38802c7b 552 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 109 279 4.1E-7 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS09050 81b6fccc36da2721de9a91963253f4dc 546 Hamap MF_00600 60 kDa chaperonin [groL]. 2 544 42.62 T 19-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APA12_RS09050 81b6fccc36da2721de9a91963253f4dc 546 SUPERFAMILY SSF52029 184 376 9.72E-87 T 19-04-2016 IPR027409 GroEL-like apical domain APA12_RS09050 81b6fccc36da2721de9a91963253f4dc 546 PRINTS PR00298 60kDa chaperonin signature 27 53 7.4E-75 T 19-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APA12_RS09050 81b6fccc36da2721de9a91963253f4dc 546 PRINTS PR00298 60kDa chaperonin signature 350 375 7.4E-75 T 19-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APA12_RS09050 81b6fccc36da2721de9a91963253f4dc 546 PRINTS PR00298 60kDa chaperonin signature 398 419 7.4E-75 T 19-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APA12_RS09050 81b6fccc36da2721de9a91963253f4dc 546 PRINTS PR00298 60kDa chaperonin signature 268 291 7.4E-75 T 19-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APA12_RS09050 81b6fccc36da2721de9a91963253f4dc 546 PRINTS PR00298 60kDa chaperonin signature 83 110 7.4E-75 T 19-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APA12_RS09050 81b6fccc36da2721de9a91963253f4dc 546 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 528 6.2E-268 T 19-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APA12_RS09050 81b6fccc36da2721de9a91963253f4dc 546 SUPERFAMILY SSF48592 406 522 2.91E-79 T 19-04-2016 APA12_RS09050 81b6fccc36da2721de9a91963253f4dc 546 SUPERFAMILY SSF48592 7 134 2.91E-79 T 19-04-2016 APA12_RS09050 81b6fccc36da2721de9a91963253f4dc 546 SUPERFAMILY SSF54849 138 204 7.33E-23 T 19-04-2016 APA12_RS09050 81b6fccc36da2721de9a91963253f4dc 546 Gene3D G3DSA:3.50.7.10 189 367 5.4E-104 T 19-04-2016 IPR027409 GroEL-like apical domain APA12_RS09050 81b6fccc36da2721de9a91963253f4dc 546 PANTHER PTHR11353 2 546 1.1E-269 T 19-04-2016 APA12_RS09050 81b6fccc36da2721de9a91963253f4dc 546 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 19-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 APA12_RS09050 81b6fccc36da2721de9a91963253f4dc 546 Gene3D G3DSA:1.10.560.10 3 188 8.3E-50 T 19-04-2016 IPR027413 GroEL-like equatorial domain APA12_RS09050 81b6fccc36da2721de9a91963253f4dc 546 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 525 6.0E-99 T 19-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 APA12_RS09050 81b6fccc36da2721de9a91963253f4dc 546 Gene3D G3DSA:1.10.560.10 368 519 2.8E-43 T 19-04-2016 IPR027413 GroEL-like equatorial domain APA12_RS04040 4a6f8b2cc7d74589a11d5c5376e8c50f 285 ProSitePatterns PS00093 N-4 cytosine-specific DNA methylases signature. 53 58 - T 19-04-2016 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site GO:0003677|GO:0015667|GO:0090124 KEGG: 00860+2.1.1.11|MetaCyc: PWY-5531|MetaCyc: PWY-7159 APA12_RS04040 4a6f8b2cc7d74589a11d5c5376e8c50f 285 Gene3D G3DSA:3.40.50.150 24 281 8.6E-57 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS04040 4a6f8b2cc7d74589a11d5c5376e8c50f 285 PANTHER PTHR13370:SF4 29 281 8.8E-44 T 19-04-2016 APA12_RS04040 4a6f8b2cc7d74589a11d5c5376e8c50f 285 PANTHER PTHR13370 29 281 8.8E-44 T 19-04-2016 APA12_RS04040 4a6f8b2cc7d74589a11d5c5376e8c50f 285 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 83 103 1.2E-27 T 19-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APA12_RS04040 4a6f8b2cc7d74589a11d5c5376e8c50f 285 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 218 235 1.2E-27 T 19-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APA12_RS04040 4a6f8b2cc7d74589a11d5c5376e8c50f 285 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 260 280 1.2E-27 T 19-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APA12_RS04040 4a6f8b2cc7d74589a11d5c5376e8c50f 285 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 48 62 1.2E-27 T 19-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APA12_RS04040 4a6f8b2cc7d74589a11d5c5376e8c50f 285 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 237 255 1.2E-27 T 19-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APA12_RS04040 4a6f8b2cc7d74589a11d5c5376e8c50f 285 Pfam PF01555 DNA methylase 49 275 4.2E-43 T 19-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 APA12_RS04040 4a6f8b2cc7d74589a11d5c5376e8c50f 285 SUPERFAMILY SSF53335 25 280 7.48E-58 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS13245 754535483bf2022245aa6c87fe0b4486 452 SUPERFAMILY SSF53738 262 368 5.49E-33 T 19-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS13245 754535483bf2022245aa6c87fe0b4486 452 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 262 373 1.6E-33 T 19-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS13245 754535483bf2022245aa6c87fe0b4486 452 Gene3D G3DSA:3.30.310.50 368 446 3.2E-14 T 19-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS13245 754535483bf2022245aa6c87fe0b4486 452 PANTHER PTHR22573 4 447 7.2E-161 T 19-04-2016 APA12_RS13245 754535483bf2022245aa6c87fe0b4486 452 Gene3D G3DSA:3.40.120.10 5 141 2.5E-45 T 19-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS13245 754535483bf2022245aa6c87fe0b4486 452 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 98 107 - T 19-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS13245 754535483bf2022245aa6c87fe0b4486 452 SUPERFAMILY SSF55957 363 448 1.03E-18 T 19-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS13245 754535483bf2022245aa6c87fe0b4486 452 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 161 258 2.2E-19 T 19-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS13245 754535483bf2022245aa6c87fe0b4486 452 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 6 138 1.4E-42 T 19-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS13245 754535483bf2022245aa6c87fe0b4486 452 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 178 197 3.9E-12 T 19-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS13245 754535483bf2022245aa6c87fe0b4486 452 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 238 253 3.9E-12 T 19-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS13245 754535483bf2022245aa6c87fe0b4486 452 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 97 111 3.9E-12 T 19-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS13245 754535483bf2022245aa6c87fe0b4486 452 PANTHER PTHR22573:SF15 4 447 7.2E-161 T 19-04-2016 APA12_RS13245 754535483bf2022245aa6c87fe0b4486 452 SUPERFAMILY SSF53738 160 260 8.63E-29 T 19-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS13245 754535483bf2022245aa6c87fe0b4486 452 SUPERFAMILY SSF53738 6 185 1.69E-45 T 19-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS13245 754535483bf2022245aa6c87fe0b4486 452 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 8 446 7.3E-186 T 19-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS13245 754535483bf2022245aa6c87fe0b4486 452 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 380 445 6.7E-13 T 19-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS13245 754535483bf2022245aa6c87fe0b4486 452 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 4 448 46.524 T 19-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS13245 754535483bf2022245aa6c87fe0b4486 452 Gene3D G3DSA:3.40.120.10 255 367 1.0E-37 T 19-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS13245 754535483bf2022245aa6c87fe0b4486 452 Gene3D G3DSA:3.40.120.10 180 253 3.4E-27 T 19-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS08965 09292184ab3777facda9d86911e42bd7 416 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 23 415 2.7E-117 T 19-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 APA12_RS08965 09292184ab3777facda9d86911e42bd7 416 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 319 332 - T 19-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 APA12_RS08965 09292184ab3777facda9d86911e42bd7 416 SUPERFAMILY SSF51905 292 409 4.4E-59 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS08965 09292184ab3777facda9d86911e42bd7 416 SUPERFAMILY SSF51905 21 196 4.4E-59 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS08965 09292184ab3777facda9d86911e42bd7 416 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 23 45 3.9E-20 T 19-04-2016 APA12_RS08965 09292184ab3777facda9d86911e42bd7 416 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 320 336 3.9E-20 T 19-04-2016 APA12_RS08965 09292184ab3777facda9d86911e42bd7 416 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 305 320 3.9E-20 T 19-04-2016 APA12_RS08965 09292184ab3777facda9d86911e42bd7 416 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 175 190 3.9E-20 T 19-04-2016 APA12_RS08965 09292184ab3777facda9d86911e42bd7 416 Pfam PF01494 FAD binding domain 21 371 7.8E-31 T 19-04-2016 IPR002938 FAD-binding domain GO:0071949 APA12_RS08965 09292184ab3777facda9d86911e42bd7 416 PANTHER PTHR13789 22 416 1.7E-104 T 19-04-2016 APA12_RS08965 09292184ab3777facda9d86911e42bd7 416 PANTHER PTHR13789:SF5 22 416 1.7E-104 T 19-04-2016 APA12_RS08965 09292184ab3777facda9d86911e42bd7 416 Gene3D G3DSA:3.50.50.60 293 381 1.2E-45 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS08965 09292184ab3777facda9d86911e42bd7 416 Gene3D G3DSA:3.50.50.60 21 201 1.2E-45 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS06515 3fc6c6388f966d4248f2b35cbc2f98b2 486 PANTHER PTHR11119 4 440 7.5E-107 T 19-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APA12_RS06515 3fc6c6388f966d4248f2b35cbc2f98b2 486 Pfam PF00860 Permease family 23 408 3.9E-102 T 19-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APA12_RS06515 3fc6c6388f966d4248f2b35cbc2f98b2 486 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 355 375 - T 19-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 APA12_RS06515 3fc6c6388f966d4248f2b35cbc2f98b2 486 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 19 438 1.2E-110 T 19-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 APA12_RS06515 3fc6c6388f966d4248f2b35cbc2f98b2 486 TIGRFAM TIGR03173 pbuX: xanthine permease 26 440 4.5E-153 T 19-04-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 APA12_RS13115 82e2701d515027ab9f8a76d4050f5fb3 231 PANTHER PTHR23029 28 229 9.6E-36 T 19-04-2016 APA12_RS13115 82e2701d515027ab9f8a76d4050f5fb3 231 PANTHER PTHR23029:SF28 28 229 9.6E-36 T 19-04-2016 APA12_RS13115 82e2701d515027ab9f8a76d4050f5fb3 231 Gene3D G3DSA:3.40.50.1240 29 227 3.1E-39 T 19-04-2016 IPR029033 Histidine phosphatase superfamily APA12_RS13115 82e2701d515027ab9f8a76d4050f5fb3 231 SMART SM00855 30 188 9.5E-12 T 19-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APA12_RS13115 82e2701d515027ab9f8a76d4050f5fb3 231 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 31 227 1.5E-43 T 19-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APA12_RS13115 82e2701d515027ab9f8a76d4050f5fb3 231 SUPERFAMILY SSF53254 28 227 2.16E-41 T 19-04-2016 IPR029033 Histidine phosphatase superfamily APA12_RS12590 9d697a547ee0ac86169434efd3c2071d 327 SUPERFAMILY SSF161098 43 313 2.09E-26 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS12590 9d697a547ee0ac86169434efd3c2071d 327 Gene3D G3DSA:1.10.3720.10 83 320 4.8E-30 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS12590 9d697a547ee0ac86169434efd3c2071d 327 PANTHER PTHR30425 22 326 2.5E-108 T 19-04-2016 APA12_RS12590 9d697a547ee0ac86169434efd3c2071d 327 PANTHER PTHR30425:SF1 22 326 2.5E-108 T 19-04-2016 APA12_RS12590 9d697a547ee0ac86169434efd3c2071d 327 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 318 5.6E-12 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS12590 9d697a547ee0ac86169434efd3c2071d 327 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 26 320 3.0E-79 T 19-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 APA12_RS11420 488315300aba700fcdd778825a5fd12f 453 Hamap MF_00027 Cobyrinate a,c-diamide synthase [cbiA]. 4 444 38.899 T 19-04-2016 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 APA12_RS11420 488315300aba700fcdd778825a5fd12f 453 PANTHER PTHR21343:SF6 255 438 4.6E-120 T 19-04-2016 APA12_RS11420 488315300aba700fcdd778825a5fd12f 453 PANTHER PTHR21343:SF6 7 238 4.6E-120 T 19-04-2016 APA12_RS11420 488315300aba700fcdd778825a5fd12f 453 PANTHER PTHR21343 255 438 4.6E-120 T 19-04-2016 APA12_RS11420 488315300aba700fcdd778825a5fd12f 453 PANTHER PTHR21343 7 238 4.6E-120 T 19-04-2016 APA12_RS11420 488315300aba700fcdd778825a5fd12f 453 Gene3D G3DSA:3.40.50.300 5 199 3.6E-21 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS11420 488315300aba700fcdd778825a5fd12f 453 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 252 441 4.2E-30 T 19-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 APA12_RS11420 488315300aba700fcdd778825a5fd12f 453 SUPERFAMILY SSF52540 5 200 1.29E-38 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS11420 488315300aba700fcdd778825a5fd12f 453 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 7 442 1.2E-90 T 19-04-2016 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 APA12_RS11420 488315300aba700fcdd778825a5fd12f 453 Gene3D G3DSA:3.40.50.880 252 438 2.9E-19 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like APA12_RS11420 488315300aba700fcdd778825a5fd12f 453 SUPERFAMILY SSF52317 250 439 3.48E-24 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like APA12_RS11420 488315300aba700fcdd778825a5fd12f 453 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 7 168 1.8E-20 T 19-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain APA12_RS05820 e300b4ea54334fa4f8e6b1f4c0877436 356 SUPERFAMILY SSF103263 4 353 4.97E-145 T 19-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APA12_RS05820 e300b4ea54334fa4f8e6b1f4c0877436 356 PANTHER PTHR21085 2 354 1.4E-198 T 19-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APA12_RS05820 e300b4ea54334fa4f8e6b1f4c0877436 356 ProSitePatterns PS00789 Chorismate synthase signature 3. 323 339 - T 19-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APA12_RS05820 e300b4ea54334fa4f8e6b1f4c0877436 356 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 19-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APA12_RS05820 e300b4ea54334fa4f8e6b1f4c0877436 356 Pfam PF01264 Chorismate synthase 10 349 5.3E-139 T 19-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APA12_RS05820 e300b4ea54334fa4f8e6b1f4c0877436 356 TIGRFAM TIGR00033 aroC: chorismate synthase 10 354 6.3E-137 T 19-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APA12_RS05820 e300b4ea54334fa4f8e6b1f4c0877436 356 Gene3D G3DSA:3.60.150.10 9 354 3.6E-158 T 19-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APA12_RS05820 e300b4ea54334fa4f8e6b1f4c0877436 356 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 19-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APA12_RS05820 e300b4ea54334fa4f8e6b1f4c0877436 356 Hamap MF_00300 Chorismate synthase [aroC]. 10 356 36.566 T 19-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APA12_RS05820 e300b4ea54334fa4f8e6b1f4c0877436 356 PIRSF PIRSF001456 3 355 5.4E-140 T 19-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APA12_RS08715 9feca79aab6a68c2c557de3582b51615 718 Pfam PF13502 AsmA-like C-terminal region 462 641 1.0E-6 T 19-04-2016 IPR032712 AsmA-like, C-terminal APA12_RS08715 9feca79aab6a68c2c557de3582b51615 718 Pfam PF05170 AsmA family 9 170 1.1E-17 T 19-04-2016 IPR007844 AsmA APA12_RS08715 9feca79aab6a68c2c557de3582b51615 718 PANTHER PTHR30441 1 172 8.7E-25 T 19-04-2016 APA12_RS12610 6f93be7b1848b7f005c3bb38e0b28fd8 342 Pfam PF13515 Fusaric acid resistance protein-like 29 151 3.4E-15 T 19-04-2016 APA12_RS12610 6f93be7b1848b7f005c3bb38e0b28fd8 342 PANTHER PTHR30509 10 255 3.7E-15 T 19-04-2016 APA12_RS04530 afe576cfd60805379e7642a77d6aafa0 661 PANTHER PTHR30009:SF0 1 418 7.8E-248 T 19-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APA12_RS04530 afe576cfd60805379e7642a77d6aafa0 661 PANTHER PTHR30009:SF0 471 659 7.8E-248 T 19-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APA12_RS04530 afe576cfd60805379e7642a77d6aafa0 661 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 641 3.7E-109 T 19-04-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal APA12_RS04530 afe576cfd60805379e7642a77d6aafa0 661 PANTHER PTHR30009 1 418 7.8E-248 T 19-04-2016 APA12_RS04530 afe576cfd60805379e7642a77d6aafa0 661 PANTHER PTHR30009 471 659 7.8E-248 T 19-04-2016 APA12_RS04530 afe576cfd60805379e7642a77d6aafa0 661 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 54 644 9.0E-183 T 19-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APA12_RS04530 afe576cfd60805379e7642a77d6aafa0 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 1.1E-56 T 19-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APA12_RS04530 afe576cfd60805379e7642a77d6aafa0 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 1.1E-56 T 19-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APA12_RS04530 afe576cfd60805379e7642a77d6aafa0 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 1.1E-56 T 19-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APA12_RS04530 afe576cfd60805379e7642a77d6aafa0 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 1.1E-56 T 19-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APA12_RS04530 afe576cfd60805379e7642a77d6aafa0 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 114 137 1.1E-56 T 19-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APA12_RS04530 afe576cfd60805379e7642a77d6aafa0 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 5 29 1.1E-56 T 19-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APA12_RS04530 afe576cfd60805379e7642a77d6aafa0 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 634 647 1.1E-56 T 19-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APA12_RS04530 afe576cfd60805379e7642a77d6aafa0 661 Pfam PF01578 Cytochrome C assembly protein 90 297 2.2E-46 T 19-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 APA12_RS04530 afe576cfd60805379e7642a77d6aafa0 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 2.8E-86 T 19-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APA12_RS04530 afe576cfd60805379e7642a77d6aafa0 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 2.8E-86 T 19-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APA12_RS04530 afe576cfd60805379e7642a77d6aafa0 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 2.8E-86 T 19-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APA12_RS04530 afe576cfd60805379e7642a77d6aafa0 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 2.8E-86 T 19-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APA12_RS04530 afe576cfd60805379e7642a77d6aafa0 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 81 107 2.8E-86 T 19-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APA12_RS04530 afe576cfd60805379e7642a77d6aafa0 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 2.8E-86 T 19-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APA12_RS04530 afe576cfd60805379e7642a77d6aafa0 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 133 150 2.8E-86 T 19-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APA12_RS04530 afe576cfd60805379e7642a77d6aafa0 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 2.8E-86 T 19-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APA12_RS07440 c11c7c9c4b0aa9236ce3ebd0871b93c0 336 PIRSF PIRSF000164 1 308 6.8E-27 T 19-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 APA12_RS07440 c11c7c9c4b0aa9236ce3ebd0871b93c0 336 SUPERFAMILY SSF51395 3 306 2.9E-47 T 19-04-2016 APA12_RS07440 c11c7c9c4b0aa9236ce3ebd0871b93c0 336 PANTHER PTHR11938 103 334 2.5E-44 T 19-04-2016 APA12_RS07440 c11c7c9c4b0aa9236ce3ebd0871b93c0 336 PANTHER PTHR11938:SF103 103 334 2.5E-44 T 19-04-2016 APA12_RS07440 c11c7c9c4b0aa9236ce3ebd0871b93c0 336 Gene3D G3DSA:3.20.20.70 5 295 1.1E-44 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS07440 c11c7c9c4b0aa9236ce3ebd0871b93c0 336 Pfam PF01180 Dihydroorotate dehydrogenase 91 291 7.9E-7 T 19-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 APA12_RS07625 4b0cb956a2d988d9cfab44f7c4c42554 553 Gene3D G3DSA:3.90.76.10 75 176 1.1E-16 T 19-04-2016 APA12_RS07625 4b0cb956a2d988d9cfab44f7c4c42554 553 Gene3D G3DSA:3.40.190.10 177 306 2.8E-27 T 19-04-2016 APA12_RS07625 4b0cb956a2d988d9cfab44f7c4c42554 553 PANTHER PTHR30290 27 550 8.2E-79 T 19-04-2016 APA12_RS07625 4b0cb956a2d988d9cfab44f7c4c42554 553 PIRSF PIRSF002741 4 546 1.7E-50 T 19-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 APA12_RS07625 4b0cb956a2d988d9cfab44f7c4c42554 553 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 76 465 3.1E-60 T 19-04-2016 IPR000914 Solute-binding protein family 5 domain APA12_RS07625 4b0cb956a2d988d9cfab44f7c4c42554 553 SUPERFAMILY SSF53850 24 548 3.44E-94 T 19-04-2016 APA12_RS07625 4b0cb956a2d988d9cfab44f7c4c42554 553 Gene3D G3DSA:3.10.105.10 307 523 2.1E-39 T 19-04-2016 APA12_RS10465 e6d91fc8f1de6d543175da04ab61370f 190 PANTHER PTHR30543:SF6 4 190 1.3E-58 T 19-04-2016 APA12_RS10465 e6d91fc8f1de6d543175da04ab61370f 190 SUPERFAMILY SSF52218 10 181 1.55E-44 T 19-04-2016 IPR029039 Flavoprotein-like domain APA12_RS10465 e6d91fc8f1de6d543175da04ab61370f 190 Gene3D G3DSA:3.40.50.360 6 187 2.4E-47 T 19-04-2016 IPR029039 Flavoprotein-like domain APA12_RS10465 e6d91fc8f1de6d543175da04ab61370f 190 Pfam PF03358 NADPH-dependent FMN reductase 11 155 1.3E-34 T 19-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 APA12_RS10465 e6d91fc8f1de6d543175da04ab61370f 190 PANTHER PTHR30543 4 190 1.3E-58 T 19-04-2016 APA12_RS05020 c68d6c80e70beba44ff2913ffbaa5a04 91 Gene3D G3DSA:4.10.640.10 11 90 3.5E-31 T 19-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS05020 c68d6c80e70beba44ff2913ffbaa5a04 91 ProSitePatterns PS00057 Ribosomal protein S18 signature. 39 62 - T 19-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS05020 c68d6c80e70beba44ff2913ffbaa5a04 91 TIGRFAM TIGR00165 S18: ribosomal protein bS18 22 90 4.1E-30 T 19-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS05020 c68d6c80e70beba44ff2913ffbaa5a04 91 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 39 89 1.0E-21 T 19-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS05020 c68d6c80e70beba44ff2913ffbaa5a04 91 PANTHER PTHR13479 9 89 1.2E-27 T 19-04-2016 APA12_RS05020 c68d6c80e70beba44ff2913ffbaa5a04 91 SUPERFAMILY SSF46911 17 90 1.01E-27 T 19-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS05020 c68d6c80e70beba44ff2913ffbaa5a04 91 Pfam PF01084 Ribosomal protein S18 37 86 1.0E-25 T 19-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS05020 c68d6c80e70beba44ff2913ffbaa5a04 91 PRINTS PR00974 Ribosomal protein S18 family signature 78 88 1.3E-18 T 19-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS05020 c68d6c80e70beba44ff2913ffbaa5a04 91 PRINTS PR00974 Ribosomal protein S18 family signature 64 78 1.3E-18 T 19-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS05020 c68d6c80e70beba44ff2913ffbaa5a04 91 PRINTS PR00974 Ribosomal protein S18 family signature 46 56 1.3E-18 T 19-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS05020 c68d6c80e70beba44ff2913ffbaa5a04 91 PRINTS PR00974 Ribosomal protein S18 family signature 56 63 1.3E-18 T 19-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS05020 c68d6c80e70beba44ff2913ffbaa5a04 91 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 20 91 21.931 T 19-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS01770 065feefe566e6219394cfa39fd839e81 278 Pfam PF04488 Glycosyltransferase sugar-binding region containing DXD motif 70 151 2.4E-9 T 19-04-2016 IPR007577 Glycosyltransferase, DXD sugar-binding motif APA12_RS01770 065feefe566e6219394cfa39fd839e81 278 PANTHER PTHR32385 54 226 9.9E-21 T 19-04-2016 APA12_RS01770 065feefe566e6219394cfa39fd839e81 278 SUPERFAMILY SSF53448 52 227 8.06E-20 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS01280 e6219dc6f25edcfb08ad0815e165a7fa 139 PRINTS PR00502 NUDIX hydrolase family signature 51 66 3.2E-6 T 19-04-2016 IPR020476 NUDIX hydrolase APA12_RS01280 e6219dc6f25edcfb08ad0815e165a7fa 139 PRINTS PR00502 NUDIX hydrolase family signature 37 51 3.2E-6 T 19-04-2016 IPR020476 NUDIX hydrolase APA12_RS01280 e6219dc6f25edcfb08ad0815e165a7fa 139 Gene3D G3DSA:3.90.79.10 8 128 4.0E-34 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APA12_RS01280 e6219dc6f25edcfb08ad0815e165a7fa 139 ProSitePatterns PS00893 Nudix box signature. 42 63 - T 19-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APA12_RS01280 e6219dc6f25edcfb08ad0815e165a7fa 139 Pfam PF00293 NUDIX domain 10 124 1.5E-22 T 19-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APA12_RS01280 e6219dc6f25edcfb08ad0815e165a7fa 139 SUPERFAMILY SSF55811 7 129 3.38E-33 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APA12_RS01280 e6219dc6f25edcfb08ad0815e165a7fa 139 PANTHER PTHR22769 8 134 7.4E-25 T 19-04-2016 APA12_RS06900 5a274eec933dccf89941a4abf4ed99e0 248 SUPERFAMILY SSF52540 19 216 2.13E-60 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS06900 5a274eec933dccf89941a4abf4ed99e0 248 PANTHER PTHR24220 20 225 2.4E-83 T 19-04-2016 APA12_RS06900 5a274eec933dccf89941a4abf4ed99e0 248 Pfam PF00005 ABC transporter 35 163 2.9E-28 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS06900 5a274eec933dccf89941a4abf4ed99e0 248 Gene3D G3DSA:3.40.50.300 17 216 5.7E-62 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS06900 5a274eec933dccf89941a4abf4ed99e0 248 PANTHER PTHR24220:SF365 20 225 2.4E-83 T 19-04-2016 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB GO:0005215|GO:0005524|GO:0005886|GO:0006810 APA12_RS06900 5a274eec933dccf89941a4abf4ed99e0 248 SMART SM00382 44 212 6.2E-14 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS06900 5a274eec933dccf89941a4abf4ed99e0 248 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APA12_RS07550 00c4e6fb257bcd1d8ae0c0d8487b929d 662 SUPERFAMILY SSF52518 337 522 1.31E-57 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS07550 00c4e6fb257bcd1d8ae0c0d8487b929d 662 ProSitePatterns PS00801 Transketolase signature 1. 44 63 - T 19-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APA12_RS07550 00c4e6fb257bcd1d8ae0c0d8487b929d 662 PANTHER PTHR11624:SF20 259 662 7.2E-297 T 19-04-2016 APA12_RS07550 00c4e6fb257bcd1d8ae0c0d8487b929d 662 PANTHER PTHR11624:SF20 32 235 7.2E-297 T 19-04-2016 APA12_RS07550 00c4e6fb257bcd1d8ae0c0d8487b929d 662 Gene3D G3DSA:3.40.50.970 354 515 2.1E-34 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS07550 00c4e6fb257bcd1d8ae0c0d8487b929d 662 PANTHER PTHR11624 259 662 7.2E-297 T 19-04-2016 IPR033247 Transketolase family APA12_RS07550 00c4e6fb257bcd1d8ae0c0d8487b929d 662 PANTHER PTHR11624 32 235 7.2E-297 T 19-04-2016 IPR033247 Transketolase family APA12_RS07550 00c4e6fb257bcd1d8ae0c0d8487b929d 662 Gene3D G3DSA:3.40.50.970 32 218 7.0E-73 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS07550 00c4e6fb257bcd1d8ae0c0d8487b929d 662 Gene3D G3DSA:3.40.50.970 260 353 7.0E-73 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS07550 00c4e6fb257bcd1d8ae0c0d8487b929d 662 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 19 301 3.0E-114 T 19-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APA12_RS07550 00c4e6fb257bcd1d8ae0c0d8487b929d 662 Pfam PF02780 Transketolase, C-terminal domain 533 645 7.1E-22 T 19-04-2016 IPR033248 Transketolase, C-terminal domain APA12_RS07550 00c4e6fb257bcd1d8ae0c0d8487b929d 662 Pfam PF02779 Transketolase, pyrimidine binding domain 339 498 1.9E-37 T 19-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APA12_RS07550 00c4e6fb257bcd1d8ae0c0d8487b929d 662 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 18 654 44.184 T 19-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APA12_RS07550 00c4e6fb257bcd1d8ae0c0d8487b929d 662 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 22 645 2.2E-233 T 19-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APA12_RS07550 00c4e6fb257bcd1d8ae0c0d8487b929d 662 Gene3D G3DSA:3.40.50.920 516 652 2.9E-28 T 19-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APA12_RS07550 00c4e6fb257bcd1d8ae0c0d8487b929d 662 SUPERFAMILY SSF52518 8 216 1.47E-76 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS07550 00c4e6fb257bcd1d8ae0c0d8487b929d 662 SUPERFAMILY SSF52518 261 400 1.47E-76 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS07550 00c4e6fb257bcd1d8ae0c0d8487b929d 662 ProSitePatterns PS00802 Transketolase signature 2. 444 460 - T 19-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APA12_RS07550 00c4e6fb257bcd1d8ae0c0d8487b929d 662 SMART SM00861 338 503 3.7E-65 T 19-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APA12_RS07550 00c4e6fb257bcd1d8ae0c0d8487b929d 662 SUPERFAMILY SSF52922 510 653 2.88E-27 T 19-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APA12_RS02005 b73608f6955edf0e02838c0c2598c7e4 432 SUPERFAMILY SSF54631 201 334 8.96E-24 T 19-04-2016 APA12_RS02005 b73608f6955edf0e02838c0c2598c7e4 432 PANTHER PTHR22777:SF8 1 432 8.1E-139 T 19-04-2016 APA12_RS02005 b73608f6955edf0e02838c0c2598c7e4 432 SMART SM01091 348 428 6.2E-24 T 19-04-2016 IPR005170 Transporter-associated domain APA12_RS02005 b73608f6955edf0e02838c0c2598c7e4 432 Pfam PF03471 Transporter associated domain 352 427 3.8E-20 T 19-04-2016 IPR005170 Transporter-associated domain APA12_RS02005 b73608f6955edf0e02838c0c2598c7e4 432 Pfam PF01595 Domain of unknown function DUF21 6 198 3.0E-44 T 19-04-2016 IPR002550 Domain of unknown function DUF21 APA12_RS02005 b73608f6955edf0e02838c0c2598c7e4 432 Gene3D G3DSA:3.30.465.10 327 426 1.2E-23 T 19-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APA12_RS02005 b73608f6955edf0e02838c0c2598c7e4 432 PANTHER PTHR22777 1 432 8.1E-139 T 19-04-2016 APA12_RS02005 b73608f6955edf0e02838c0c2598c7e4 432 SUPERFAMILY SSF56176 350 428 2.34E-18 T 19-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APA12_RS02005 b73608f6955edf0e02838c0c2598c7e4 432 Pfam PF00571 CBS domain 283 332 2.7E-5 T 19-04-2016 IPR000644 CBS domain APA12_RS02005 b73608f6955edf0e02838c0c2598c7e4 432 Gene3D G3DSA:3.10.580.10 199 326 9.3E-16 T 19-04-2016 APA12_RS08565 921f1d020b28052f7640ab3264f71637 293 Gene3D G3DSA:3.40.190.10 91 176 2.1E-24 T 19-04-2016 APA12_RS08565 921f1d020b28052f7640ab3264f71637 293 Gene3D G3DSA:3.40.190.10 177 256 3.6E-13 T 19-04-2016 APA12_RS08565 921f1d020b28052f7640ab3264f71637 293 SUPERFAMILY SSF53850 89 290 2.71E-40 T 19-04-2016 APA12_RS08565 921f1d020b28052f7640ab3264f71637 293 SUPERFAMILY SSF46785 2 111 2.88E-25 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS08565 921f1d020b28052f7640ab3264f71637 293 Gene3D G3DSA:1.10.10.10 2 86 5.2E-27 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS08565 921f1d020b28052f7640ab3264f71637 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.8E-22 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS08565 921f1d020b28052f7640ab3264f71637 293 Pfam PF03466 LysR substrate binding domain 88 290 1.4E-37 T 19-04-2016 IPR005119 LysR, substrate-binding APA12_RS08565 921f1d020b28052f7640ab3264f71637 293 PANTHER PTHR30537 1 290 9.9E-79 T 19-04-2016 APA12_RS08565 921f1d020b28052f7640ab3264f71637 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.3E-7 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS08565 921f1d020b28052f7640ab3264f71637 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.3E-7 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS08565 921f1d020b28052f7640ab3264f71637 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.3E-7 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS06200 7bdd1892d91e99dd3095119aeabe25cc 277 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 21 276 9.2E-123 T 19-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 APA12_RS06200 7bdd1892d91e99dd3095119aeabe25cc 277 Gene3D G3DSA:3.20.20.70 19 276 7.5E-115 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS06200 7bdd1892d91e99dd3095119aeabe25cc 277 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 16 277 51.677 T 19-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 APA12_RS06200 7bdd1892d91e99dd3095119aeabe25cc 277 Pfam PF00793 DAHP synthetase I family 14 275 8.3E-73 T 19-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 APA12_RS06200 7bdd1892d91e99dd3095119aeabe25cc 277 PANTHER PTHR21057 16 277 3.0E-160 T 19-04-2016 APA12_RS06200 7bdd1892d91e99dd3095119aeabe25cc 277 SUPERFAMILY SSF51569 9 276 7.6E-109 T 19-04-2016 APA12_RS06200 7bdd1892d91e99dd3095119aeabe25cc 277 PANTHER PTHR21057:SF2 16 277 3.0E-160 T 19-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 APA12_RS07705 67bcdf245b5f9cf5a730797b5abfa030 205 Gene3D G3DSA:3.40.50.150 33 202 1.8E-49 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS07705 67bcdf245b5f9cf5a730797b5abfa030 205 SUPERFAMILY SSF53335 31 202 1.13E-38 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS07705 67bcdf245b5f9cf5a730797b5abfa030 205 PANTHER PTHR10509 37 201 4.7E-46 T 19-04-2016 APA12_RS07705 67bcdf245b5f9cf5a730797b5abfa030 205 PANTHER PTHR10509:SF10 37 201 4.7E-46 T 19-04-2016 APA12_RS07705 67bcdf245b5f9cf5a730797b5abfa030 205 Pfam PF01596 O-methyltransferase 40 169 2.4E-16 T 19-04-2016 IPR002935 O-methyltransferase, family 3 GO:0008171 APA12_RS03770 8e1b192e959772b348ec97b70f77658a 328 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 27 312 4.5E-69 T 19-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APA12_RS03770 8e1b192e959772b348ec97b70f77658a 328 Gene3D G3DSA:3.40.50.1100 155 326 1.6E-70 T 19-04-2016 APA12_RS03770 8e1b192e959772b348ec97b70f77658a 328 TIGRFAM TIGR01139 cysK: cysteine synthase A 26 325 2.8E-121 T 19-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 APA12_RS03770 8e1b192e959772b348ec97b70f77658a 328 PANTHER PTHR10314 13 325 2.8E-147 T 19-04-2016 APA12_RS03770 8e1b192e959772b348ec97b70f77658a 328 TIGRFAM TIGR01136 cysKM: cysteine synthase 25 325 2.9E-117 T 19-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 APA12_RS03770 8e1b192e959772b348ec97b70f77658a 328 PANTHER PTHR10314:SF110 13 325 2.8E-147 T 19-04-2016 APA12_RS03770 8e1b192e959772b348ec97b70f77658a 328 SUPERFAMILY SSF53686 20 325 1.57E-95 T 19-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APA12_RS03770 8e1b192e959772b348ec97b70f77658a 328 Gene3D G3DSA:3.40.50.1100 57 154 3.1E-37 T 19-04-2016 APA12_RS03450 049da7f4c7e872490f01164255392ca2 337 SUPERFAMILY SSF54631 273 335 1.62E-8 T 19-04-2016 APA12_RS03450 049da7f4c7e872490f01164255392ca2 337 PANTHER PTHR38418:SF1 19 230 1.1E-38 T 19-04-2016 APA12_RS03450 049da7f4c7e872490f01164255392ca2 337 Pfam PF01380 SIS domain 58 186 3.6E-27 T 19-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APA12_RS03450 049da7f4c7e872490f01164255392ca2 337 SUPERFAMILY SSF53697 24 282 1.18E-59 T 19-04-2016 APA12_RS03450 049da7f4c7e872490f01164255392ca2 337 PIRSF PIRSF004692 3 337 1.4E-120 T 19-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 APA12_RS03450 049da7f4c7e872490f01164255392ca2 337 PANTHER PTHR38418 19 230 1.1E-38 T 19-04-2016 APA12_RS03450 049da7f4c7e872490f01164255392ca2 337 Gene3D G3DSA:3.10.580.10 212 334 7.6E-34 T 19-04-2016 APA12_RS03450 049da7f4c7e872490f01164255392ca2 337 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 59 327 8.3E-89 T 19-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 APA12_RS03450 049da7f4c7e872490f01164255392ca2 337 Pfam PF00571 CBS domain 214 271 2.2E-7 T 19-04-2016 IPR000644 CBS domain APA12_RS03450 049da7f4c7e872490f01164255392ca2 337 Pfam PF00571 CBS domain 279 334 2.5E-10 T 19-04-2016 IPR000644 CBS domain APA12_RS03450 049da7f4c7e872490f01164255392ca2 337 SMART SM00116 223 271 1.6 T 19-04-2016 IPR000644 CBS domain APA12_RS03450 049da7f4c7e872490f01164255392ca2 337 SMART SM00116 286 336 2.6 T 19-04-2016 IPR000644 CBS domain APA12_RS03450 049da7f4c7e872490f01164255392ca2 337 Gene3D G3DSA:3.40.50.10490 46 211 5.4E-44 T 19-04-2016 APA12_RS00500 cde73e82a37a03b6e36f59368d275a08 138 SUPERFAMILY SSF46785 28 116 4.6E-18 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS00500 cde73e82a37a03b6e36f59368d275a08 138 Pfam PF01047 MarR family 31 89 1.2E-8 T 19-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APA12_RS00500 cde73e82a37a03b6e36f59368d275a08 138 SMART SM00347 23 124 4.8E-7 T 19-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APA12_RS00500 cde73e82a37a03b6e36f59368d275a08 138 Gene3D G3DSA:1.10.10.10 27 126 7.9E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS05985 f318ac642ee831340d07b4093a7779f3 168 PANTHER PTHR30308:SF2 6 166 5.2E-66 T 19-04-2016 APA12_RS05985 f318ac642ee831340d07b4093a7779f3 168 Hamap MF_00023 SsrA-binding protein [smpB]. 1 166 60.959 T 19-04-2016 IPR000037 SsrA-binding protein GO:0003723 APA12_RS05985 f318ac642ee831340d07b4093a7779f3 168 PANTHER PTHR30308 6 166 5.2E-66 T 19-04-2016 APA12_RS05985 f318ac642ee831340d07b4093a7779f3 168 Gene3D G3DSA:2.40.280.10 18 138 5.0E-41 T 19-04-2016 IPR023620 Small protein B APA12_RS05985 f318ac642ee831340d07b4093a7779f3 168 SUPERFAMILY SSF74982 16 143 3.66E-42 T 19-04-2016 IPR023620 Small protein B APA12_RS05985 f318ac642ee831340d07b4093a7779f3 168 Pfam PF01668 SmpB protein 18 80 4.7E-25 T 19-04-2016 IPR000037 SsrA-binding protein GO:0003723 APA12_RS05985 f318ac642ee831340d07b4093a7779f3 168 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 20 143 3.0E-51 T 19-04-2016 IPR000037 SsrA-binding protein GO:0003723 APA12_RS05985 f318ac642ee831340d07b4093a7779f3 168 TIGRFAM TIGR00086 smpB: SsrA-binding protein 19 160 2.6E-48 T 19-04-2016 IPR000037 SsrA-binding protein GO:0003723 APA12_RS05985 f318ac642ee831340d07b4093a7779f3 168 ProSitePatterns PS01317 SsrA-binding protein. 37 49 - T 19-04-2016 IPR020081 SsrA-binding protein, conserved site APA12_RS11550 0e29a0511a814d02784d8904c43df460 353 Pfam PF13362 Toprim domain 253 345 3.9E-19 T 19-04-2016 IPR006171 Toprim domain APA12_RS11550 0e29a0511a814d02784d8904c43df460 353 Gene3D G3DSA:3.40.1360.10 247 345 5.7E-5 T 19-04-2016 APA12_RS03960 932e8c3b39735e4d5cda50c69c8c5716 375 Gene3D G3DSA:3.30.1330.60 266 374 8.0E-27 T 19-04-2016 IPR006665 OmpA-like domain APA12_RS03960 932e8c3b39735e4d5cda50c69c8c5716 375 Gene3D G3DSA:2.40.160.20 12 258 1.1E-15 T 19-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APA12_RS03960 932e8c3b39735e4d5cda50c69c8c5716 375 Pfam PF00691 OmpA family 267 368 1.1E-15 T 19-04-2016 IPR006665 OmpA-like domain APA12_RS03960 932e8c3b39735e4d5cda50c69c8c5716 375 PANTHER PTHR30128:SF16 221 375 5.7E-21 T 19-04-2016 APA12_RS03960 932e8c3b39735e4d5cda50c69c8c5716 375 PANTHER PTHR30128 221 375 5.7E-21 T 19-04-2016 APA12_RS03960 932e8c3b39735e4d5cda50c69c8c5716 375 SUPERFAMILY SSF103088 241 374 2.09E-27 T 19-04-2016 IPR006665 OmpA-like domain APA12_RS03960 932e8c3b39735e4d5cda50c69c8c5716 375 SUPERFAMILY SSF56925 25 240 8.89E-14 T 19-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APA12_RS07555 76a39993c94076c561f1fbff1833f36d 245 Pfam PF01728 FtsJ-like methyltransferase 60 243 5.2E-23 T 19-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 APA12_RS07555 76a39993c94076c561f1fbff1833f36d 245 PIRSF PIRSF005578 1 245 1.3E-98 T 19-04-2016 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 APA12_RS07555 76a39993c94076c561f1fbff1833f36d 245 Pfam PF01479 S4 domain 4 47 4.8E-5 T 19-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APA12_RS07555 76a39993c94076c561f1fbff1833f36d 245 Gene3D G3DSA:3.10.290.10 4 90 8.1E-17 T 19-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APA12_RS07555 76a39993c94076c561f1fbff1833f36d 245 SUPERFAMILY SSF53335 56 243 2.91E-25 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS07555 76a39993c94076c561f1fbff1833f36d 245 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 5 237 3.9E-69 T 19-04-2016 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 APA12_RS07555 76a39993c94076c561f1fbff1833f36d 245 PANTHER PTHR32319:SF0 1 245 9.3E-120 T 19-04-2016 APA12_RS07555 76a39993c94076c561f1fbff1833f36d 245 Gene3D G3DSA:3.40.50.150 91 176 6.9E-7 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS07555 76a39993c94076c561f1fbff1833f36d 245 PANTHER PTHR32319 1 245 9.3E-120 T 19-04-2016 APA12_RS07555 76a39993c94076c561f1fbff1833f36d 245 SMART SM00363 4 66 4.3E-5 T 19-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APA12_RS07555 76a39993c94076c561f1fbff1833f36d 245 SUPERFAMILY SSF55174 4 68 1.19E-8 T 19-04-2016 APA12_RS02310 c40642ece090407061b2dd12fb25eb6f 196 Gene3D G3DSA:3.40.30.10 15 176 4.1E-8 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS02310 c40642ece090407061b2dd12fb25eb6f 196 SUPERFAMILY SSF52833 46 176 2.42E-11 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS03190 3346f85732a303025e8293382359cf50 481 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 271 286 - T 19-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APA12_RS03190 3346f85732a303025e8293382359cf50 481 SUPERFAMILY SSF55931 116 480 1.57E-133 T 19-04-2016 APA12_RS03190 3346f85732a303025e8293382359cf50 481 PANTHER PTHR20852 174 481 2.0E-255 T 19-04-2016 APA12_RS03190 3346f85732a303025e8293382359cf50 481 PANTHER PTHR20852 11 151 2.0E-255 T 19-04-2016 APA12_RS03190 3346f85732a303025e8293382359cf50 481 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 28 108 3.2E-27 T 19-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APA12_RS03190 3346f85732a303025e8293382359cf50 481 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 18 480 2.1E-199 T 19-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APA12_RS03190 3346f85732a303025e8293382359cf50 481 Gene3D G3DSA:3.30.590.10 119 468 5.9E-131 T 19-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 APA12_RS03190 3346f85732a303025e8293382359cf50 481 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 398 410 - T 19-04-2016 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APA12_RS03190 3346f85732a303025e8293382359cf50 481 SUPERFAMILY SSF54368 17 114 2.22E-33 T 19-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APA12_RS03190 3346f85732a303025e8293382359cf50 481 Pfam PF00120 Glutamine synthetase, catalytic domain 116 478 2.4E-136 T 19-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APA12_RS03190 3346f85732a303025e8293382359cf50 481 Gene3D G3DSA:3.10.20.70 17 118 5.2E-36 T 19-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APA12_RS03190 3346f85732a303025e8293382359cf50 481 PANTHER PTHR20852:SF15 174 481 2.0E-255 T 19-04-2016 APA12_RS03190 3346f85732a303025e8293382359cf50 481 PANTHER PTHR20852:SF15 11 151 2.0E-255 T 19-04-2016 APA12_RS03190 3346f85732a303025e8293382359cf50 481 ProSitePatterns PS00180 Glutamine synthetase signature 1. 63 81 - T 19-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APA12_RS03190 3346f85732a303025e8293382359cf50 481 SMART SM01230 115 391 1.3E-141 T 19-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APA12_RS06280 a74a13845b32136dffd7f9fb323ef64a 225 Gene3D G3DSA:3.40.50.150 6 216 1.9E-26 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS06280 a74a13845b32136dffd7f9fb323ef64a 225 SUPERFAMILY SSF53335 7 194 1.25E-28 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS06280 a74a13845b32136dffd7f9fb323ef64a 225 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 22 175 9.6E-16 T 19-04-2016 APA12_RS12080 aff2d8a94a0326791f5ee0afbe0f4b61 374 Gene3D G3DSA:3.50.50.60 5 178 7.3E-41 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS12080 aff2d8a94a0326791f5ee0afbe0f4b61 374 Gene3D G3DSA:3.50.50.60 270 352 7.3E-41 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS12080 aff2d8a94a0326791f5ee0afbe0f4b61 374 PANTHER PTHR13789 5 361 2.8E-79 T 19-04-2016 APA12_RS12080 aff2d8a94a0326791f5ee0afbe0f4b61 374 SUPERFAMILY SSF51905 270 366 5.36E-58 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS12080 aff2d8a94a0326791f5ee0afbe0f4b61 374 SUPERFAMILY SSF51905 6 172 5.36E-58 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS12080 aff2d8a94a0326791f5ee0afbe0f4b61 374 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 298 314 1.2E-17 T 19-04-2016 APA12_RS12080 aff2d8a94a0326791f5ee0afbe0f4b61 374 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 333 349 1.2E-17 T 19-04-2016 APA12_RS12080 aff2d8a94a0326791f5ee0afbe0f4b61 374 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 1.2E-17 T 19-04-2016 APA12_RS12080 aff2d8a94a0326791f5ee0afbe0f4b61 374 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 283 298 1.2E-17 T 19-04-2016 APA12_RS12080 aff2d8a94a0326791f5ee0afbe0f4b61 374 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 1.2E-17 T 19-04-2016 APA12_RS12080 aff2d8a94a0326791f5ee0afbe0f4b61 374 PANTHER PTHR13789:SF186 5 361 2.8E-79 T 19-04-2016 APA12_RS12080 aff2d8a94a0326791f5ee0afbe0f4b61 374 SUPERFAMILY SSF54373 176 272 5.89E-5 T 19-04-2016 APA12_RS12080 aff2d8a94a0326791f5ee0afbe0f4b61 374 Pfam PF01494 FAD binding domain 7 344 3.2E-20 T 19-04-2016 IPR002938 FAD-binding domain GO:0071949 APA12_RS03310 394f060df929cb7d70713366e82c78a8 368 PANTHER PTHR22939 132 360 5.8E-65 T 19-04-2016 APA12_RS03310 394f060df929cb7d70713366e82c78a8 368 Gene3D G3DSA:2.30.42.10 102 202 1.2E-20 T 19-04-2016 IPR001478 PDZ domain GO:0005515 APA12_RS03310 394f060df929cb7d70713366e82c78a8 368 PANTHER PTHR22939 90 97 5.8E-65 T 19-04-2016 APA12_RS03310 394f060df929cb7d70713366e82c78a8 368 SUPERFAMILY SSF50156 95 202 1.58E-16 T 19-04-2016 IPR001478 PDZ domain GO:0005515 APA12_RS03310 394f060df929cb7d70713366e82c78a8 368 Pfam PF02163 Peptidase family M50 11 344 2.5E-76 T 19-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 APA12_RS03310 394f060df929cb7d70713366e82c78a8 368 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 131 356 4.0E-49 T 19-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 APA12_RS03310 394f060df929cb7d70713366e82c78a8 368 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 5 192 4.8E-45 T 19-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 APA12_RS03310 394f060df929cb7d70713366e82c78a8 368 PANTHER PTHR22939:SF78 132 360 5.8E-65 T 19-04-2016 APA12_RS03310 394f060df929cb7d70713366e82c78a8 368 Pfam PF13180 PDZ domain 138 200 5.9E-8 T 19-04-2016 IPR001478 PDZ domain GO:0005515 APA12_RS03310 394f060df929cb7d70713366e82c78a8 368 PANTHER PTHR22939:SF78 90 97 5.8E-65 T 19-04-2016 APA12_RS03310 394f060df929cb7d70713366e82c78a8 368 SMART SM00228 122 192 3.5E-4 T 19-04-2016 IPR001478 PDZ domain GO:0005515 APA12_RS03395 a9d386332580436385c0bc1c7b681062 262 Gene3D G3DSA:3.30.70.660 119 254 5.6E-51 T 19-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 APA12_RS03395 a9d386332580436385c0bc1c7b681062 262 SUPERFAMILY SSF55120 9 259 1.22E-79 T 19-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APA12_RS03395 a9d386332580436385c0bc1c7b681062 262 PIRSF PIRSF001430 9 261 5.0E-69 T 19-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 APA12_RS03395 a9d386332580436385c0bc1c7b681062 262 Gene3D G3DSA:3.30.70.580 9 117 2.4E-26 T 19-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 APA12_RS03395 a9d386332580436385c0bc1c7b681062 262 PANTHER PTHR11142 8 261 5.2E-90 T 19-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 APA12_RS03395 a9d386332580436385c0bc1c7b681062 262 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 12 251 2.5E-52 T 19-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 APA12_RS03395 a9d386332580436385c0bc1c7b681062 262 Pfam PF01416 tRNA pseudouridine synthase 155 257 2.0E-30 T 19-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APA12_RS03395 a9d386332580436385c0bc1c7b681062 262 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 10 256 32.325 T 19-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 APA12_RS03675 71333c6850b3ee0a7db5d7d1c17403a4 328 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 13 318 72.513 T 19-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APA12_RS03675 71333c6850b3ee0a7db5d7d1c17403a4 328 Gene3D G3DSA:3.40.50.1370 12 155 1.3E-53 T 19-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APA12_RS03675 71333c6850b3ee0a7db5d7d1c17403a4 328 SUPERFAMILY SSF53671 12 320 7.99E-100 T 19-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APA12_RS03675 71333c6850b3ee0a7db5d7d1c17403a4 328 Gene3D G3DSA:3.40.50.1370 156 304 8.5E-59 T 19-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APA12_RS03675 71333c6850b3ee0a7db5d7d1c17403a4 328 PANTHER PTHR11405:SF1 13 318 3.0E-133 T 19-04-2016 APA12_RS03675 71333c6850b3ee0a7db5d7d1c17403a4 328 PRINTS PR00102 Ornithine carbamoyltransferase signature 61 75 2.0E-27 T 19-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APA12_RS03675 71333c6850b3ee0a7db5d7d1c17403a4 328 PRINTS PR00102 Ornithine carbamoyltransferase signature 134 148 2.0E-27 T 19-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APA12_RS03675 71333c6850b3ee0a7db5d7d1c17403a4 328 PRINTS PR00102 Ornithine carbamoyltransferase signature 233 243 2.0E-27 T 19-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APA12_RS03675 71333c6850b3ee0a7db5d7d1c17403a4 328 PRINTS PR00102 Ornithine carbamoyltransferase signature 296 307 2.0E-27 T 19-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APA12_RS03675 71333c6850b3ee0a7db5d7d1c17403a4 328 PRINTS PR00102 Ornithine carbamoyltransferase signature 94 107 2.0E-27 T 19-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APA12_RS03675 71333c6850b3ee0a7db5d7d1c17403a4 328 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 14 317 6.3E-109 T 19-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APA12_RS03675 71333c6850b3ee0a7db5d7d1c17403a4 328 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 145 156 8.7E-26 T 19-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APA12_RS03675 71333c6850b3ee0a7db5d7d1c17403a4 328 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 282 305 8.7E-26 T 19-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APA12_RS03675 71333c6850b3ee0a7db5d7d1c17403a4 328 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 279 8.7E-26 T 19-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APA12_RS03675 71333c6850b3ee0a7db5d7d1c17403a4 328 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 63 82 8.7E-26 T 19-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APA12_RS03675 71333c6850b3ee0a7db5d7d1c17403a4 328 PANTHER PTHR11405 13 318 3.0E-133 T 19-04-2016 APA12_RS03675 71333c6850b3ee0a7db5d7d1c17403a4 328 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 14 158 7.9E-48 T 19-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 APA12_RS03675 71333c6850b3ee0a7db5d7d1c17403a4 328 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 165 315 3.5E-49 T 19-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 APA12_RS00440 f5bcc8efa3991e1905f8383e6df8b589 742 SUPERFAMILY SSF50998 51 635 2.22E-159 T 19-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APA12_RS00440 f5bcc8efa3991e1905f8383e6df8b589 742 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 280 301 - T 19-04-2016 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 APA12_RS00440 f5bcc8efa3991e1905f8383e6df8b589 742 Gene3D G3DSA:2.140.10.10 21 619 9.4E-142 T 19-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain APA12_RS00440 f5bcc8efa3991e1905f8383e6df8b589 742 PANTHER PTHR32303 257 384 4.7E-72 T 19-04-2016 APA12_RS00440 f5bcc8efa3991e1905f8383e6df8b589 742 PANTHER PTHR32303 52 240 4.7E-72 T 19-04-2016 APA12_RS00440 f5bcc8efa3991e1905f8383e6df8b589 742 PANTHER PTHR32303 416 590 4.7E-72 T 19-04-2016 APA12_RS00440 f5bcc8efa3991e1905f8383e6df8b589 742 PANTHER PTHR32303:SF2 257 384 4.7E-72 T 19-04-2016 APA12_RS00440 f5bcc8efa3991e1905f8383e6df8b589 742 PANTHER PTHR32303:SF2 52 240 4.7E-72 T 19-04-2016 APA12_RS00440 f5bcc8efa3991e1905f8383e6df8b589 742 PANTHER PTHR32303:SF2 416 590 4.7E-72 T 19-04-2016 APA12_RS00440 f5bcc8efa3991e1905f8383e6df8b589 742 Pfam PF13360 PQQ-like domain 83 246 1.1E-12 T 19-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat APA12_RS00440 f5bcc8efa3991e1905f8383e6df8b589 742 Pfam PF13360 PQQ-like domain 507 576 2.8E-4 T 19-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat APA12_RS00440 f5bcc8efa3991e1905f8383e6df8b589 742 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 639 711 4.7E-9 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS00440 f5bcc8efa3991e1905f8383e6df8b589 742 SMART SM00564 149 181 3.3E-5 T 19-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APA12_RS00440 f5bcc8efa3991e1905f8383e6df8b589 742 SMART SM00564 356 389 610.0 T 19-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APA12_RS00440 f5bcc8efa3991e1905f8383e6df8b589 742 SMART SM00564 524 555 49.0 T 19-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APA12_RS00440 f5bcc8efa3991e1905f8383e6df8b589 742 SMART SM00564 99 130 1.3E-5 T 19-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APA12_RS00440 f5bcc8efa3991e1905f8383e6df8b589 742 SMART SM00564 200 238 3.5E-4 T 19-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APA12_RS00440 f5bcc8efa3991e1905f8383e6df8b589 742 TIGRFAM TIGR03075 PQQ_enz_alc_DH: PQQ-dependent dehydrogenase, methanol/ethanol family 40 583 4.5E-197 T 19-04-2016 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family GO:0005509|GO:0016020|GO:0016614|GO:0055114 APA12_RS00440 f5bcc8efa3991e1905f8383e6df8b589 742 ProSitePatterns PS00363 Bacterial quinoprotein dehydrogenases signature 1. 54 82 - T 19-04-2016 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 APA12_RS00440 f5bcc8efa3991e1905f8383e6df8b589 742 Gene3D G3DSA:1.10.760.10 626 718 3.2E-16 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS00440 f5bcc8efa3991e1905f8383e6df8b589 742 SUPERFAMILY SSF46626 625 718 7.16E-16 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS04425 885f2ef303fdd5bcd13e32b46bcd1812 225 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 138 160 - T 19-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APA12_RS04425 885f2ef303fdd5bcd13e32b46bcd1812 225 Pfam PF00834 Ribulose-phosphate 3 epimerase family 9 205 1.8E-80 T 19-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APA12_RS04425 885f2ef303fdd5bcd13e32b46bcd1812 225 Gene3D G3DSA:3.20.20.70 7 218 7.8E-91 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS04425 885f2ef303fdd5bcd13e32b46bcd1812 225 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 36 50 - T 19-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APA12_RS04425 885f2ef303fdd5bcd13e32b46bcd1812 225 PIRSF PIRSF001461 4 225 7.3E-92 T 19-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APA12_RS04425 885f2ef303fdd5bcd13e32b46bcd1812 225 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 8 218 1.2E-88 T 19-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APA12_RS04425 885f2ef303fdd5bcd13e32b46bcd1812 225 SUPERFAMILY SSF51366 6 218 7.85E-76 T 19-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APA12_RS04425 885f2ef303fdd5bcd13e32b46bcd1812 225 PANTHER PTHR11749 5 223 6.8E-120 T 19-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APA12_RS10435 85a6ed6476384d78f0d592e252f26b9f 294 SUPERFAMILY SSF55811 14 132 8.11E-5 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APA12_RS10435 85a6ed6476384d78f0d592e252f26b9f 294 PIRSF PIRSF019423 1 292 5.8E-96 T 19-04-2016 IPR011213 Nicotinic acid mononucleotide biosynthesis protein APA12_RS10435 85a6ed6476384d78f0d592e252f26b9f 294 Gene3D G3DSA:3.90.79.10 29 111 3.9E-9 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APA12_RS10435 85a6ed6476384d78f0d592e252f26b9f 294 Gene3D G3DSA:3.90.79.10 181 215 3.9E-9 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APA12_RS10435 85a6ed6476384d78f0d592e252f26b9f 294 SUPERFAMILY SSF46785 212 278 5.44E-19 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS10435 85a6ed6476384d78f0d592e252f26b9f 294 Gene3D G3DSA:1.10.10.10 216 278 5.0E-28 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS12570 f7ee008f0263a62bdc549169b42262d9 281 SUPERFAMILY SSF51735 7 278 2.64E-32 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS12570 f7ee008f0263a62bdc549169b42262d9 281 Gene3D G3DSA:3.40.50.720 5 214 5.8E-23 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS12570 f7ee008f0263a62bdc549169b42262d9 281 PANTHER PTHR12126 112 277 5.0E-16 T 19-04-2016 APA12_RS12570 f7ee008f0263a62bdc549169b42262d9 281 PANTHER PTHR12126:SF1 112 277 5.0E-16 T 19-04-2016 APA12_RS12570 f7ee008f0263a62bdc549169b42262d9 281 Pfam PF13460 NAD(P)H-binding 9 76 2.2E-7 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS04010 2ac0718ea85ffab85386180a66bc7b4d 368 PANTHER PTHR11735:SF6 14 365 2.4E-129 T 19-04-2016 APA12_RS04010 2ac0718ea85ffab85386180a66bc7b4d 368 ProSitePatterns PS01016 Glycoprotease family signature. 106 126 - T 19-04-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APA12_RS04010 2ac0718ea85ffab85386180a66bc7b4d 368 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 167 188 1.7E-42 T 19-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APA12_RS04010 2ac0718ea85ffab85386180a66bc7b4d 368 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 86 106 1.7E-42 T 19-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APA12_RS04010 2ac0718ea85ffab85386180a66bc7b4d 368 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 107 126 1.7E-42 T 19-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APA12_RS04010 2ac0718ea85ffab85386180a66bc7b4d 368 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 15 28 1.7E-42 T 19-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APA12_RS04010 2ac0718ea85ffab85386180a66bc7b4d 368 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 144 156 1.7E-42 T 19-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APA12_RS04010 2ac0718ea85ffab85386180a66bc7b4d 368 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 280 289 1.7E-42 T 19-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APA12_RS04010 2ac0718ea85ffab85386180a66bc7b4d 368 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 14 330 1.3E-114 T 19-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APA12_RS04010 2ac0718ea85ffab85386180a66bc7b4d 368 SUPERFAMILY SSF53067 14 131 6.47E-27 T 19-04-2016 APA12_RS04010 2ac0718ea85ffab85386180a66bc7b4d 368 SUPERFAMILY SSF53067 111 325 3.21E-36 T 19-04-2016 APA12_RS04010 2ac0718ea85ffab85386180a66bc7b4d 368 Gene3D G3DSA:3.30.420.40 14 172 2.9E-39 T 19-04-2016 APA12_RS04010 2ac0718ea85ffab85386180a66bc7b4d 368 Pfam PF00814 Glycoprotease family 34 324 7.2E-93 T 19-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APA12_RS04010 2ac0718ea85ffab85386180a66bc7b4d 368 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 15 323 2.9E-90 T 19-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APA12_RS04010 2ac0718ea85ffab85386180a66bc7b4d 368 PANTHER PTHR11735 14 365 2.4E-129 T 19-04-2016 APA12_RS04010 2ac0718ea85ffab85386180a66bc7b4d 368 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 14 354 56.258 T 19-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APA12_RS07695 599154d0723293fcd980797766b79d69 502 PRINTS PR01036 Tetracycline resistance protein TetB signature 24 48 2.1E-10 T 19-04-2016 APA12_RS07695 599154d0723293fcd980797766b79d69 502 PRINTS PR01036 Tetracycline resistance protein TetB signature 209 227 2.1E-10 T 19-04-2016 APA12_RS07695 599154d0723293fcd980797766b79d69 502 PRINTS PR01036 Tetracycline resistance protein TetB signature 114 134 2.1E-10 T 19-04-2016 APA12_RS07695 599154d0723293fcd980797766b79d69 502 PRINTS PR01036 Tetracycline resistance protein TetB signature 409 428 2.1E-10 T 19-04-2016 APA12_RS07695 599154d0723293fcd980797766b79d69 502 PRINTS PR01036 Tetracycline resistance protein TetB signature 144 168 2.1E-10 T 19-04-2016 APA12_RS07695 599154d0723293fcd980797766b79d69 502 SUPERFAMILY SSF103473 255 428 2.35E-63 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS07695 599154d0723293fcd980797766b79d69 502 SUPERFAMILY SSF103473 11 201 2.35E-63 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS07695 599154d0723293fcd980797766b79d69 502 SUPERFAMILY SSF103473 477 495 2.35E-63 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS07695 599154d0723293fcd980797766b79d69 502 PANTHER PTHR23501:SF73 1 500 2.5E-143 T 19-04-2016 APA12_RS07695 599154d0723293fcd980797766b79d69 502 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 19 495 1.8E-75 T 19-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 APA12_RS07695 599154d0723293fcd980797766b79d69 502 Gene3D G3DSA:1.20.1250.20 274 429 5.0E-16 T 19-04-2016 APA12_RS07695 599154d0723293fcd980797766b79d69 502 Gene3D G3DSA:1.20.1250.20 23 202 1.8E-33 T 19-04-2016 APA12_RS07695 599154d0723293fcd980797766b79d69 502 Gene3D G3DSA:1.20.1250.20 478 496 5.0E-16 T 19-04-2016 APA12_RS07695 599154d0723293fcd980797766b79d69 502 PANTHER PTHR23501 1 500 2.5E-143 T 19-04-2016 APA12_RS07695 599154d0723293fcd980797766b79d69 502 Pfam PF07690 Major Facilitator Superfamily 26 418 2.2E-52 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APA12_RS12690 9371632c7b307980b0ab0f00e92f1691 889 SUPERFAMILY SSF50447 561 645 2.15E-25 T 19-04-2016 IPR009000 Translation protein, beta-barrel domain APA12_RS12690 9371632c7b307980b0ab0f00e92f1691 889 SUPERFAMILY SSF52156 675 798 5.36E-33 T 19-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 APA12_RS12690 9371632c7b307980b0ab0f00e92f1691 889 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 11 54 1.8E-11 T 19-04-2016 IPR013575 Initiation factor 2 associated domain, bacterial APA12_RS12690 9371632c7b307980b0ab0f00e92f1691 889 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 307 885 1.7E-245 T 19-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 APA12_RS12690 9371632c7b307980b0ab0f00e92f1691 889 PANTHER PTHR23115:SF184 744 880 5.3E-204 T 19-04-2016 APA12_RS12690 9371632c7b307980b0ab0f00e92f1691 889 PANTHER PTHR23115:SF184 373 719 5.3E-204 T 19-04-2016 APA12_RS12690 9371632c7b307980b0ab0f00e92f1691 889 Pfam PF11987 Translation-initiation factor 2 677 781 1.0E-34 T 19-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 APA12_RS12690 9371632c7b307980b0ab0f00e92f1691 889 SUPERFAMILY SSF50447 793 886 6.86E-33 T 19-04-2016 IPR009000 Translation protein, beta-barrel domain APA12_RS12690 9371632c7b307980b0ab0f00e92f1691 889 Pfam PF00009 Elongation factor Tu GTP binding domain 393 549 1.3E-31 T 19-04-2016 APA12_RS12690 9371632c7b307980b0ab0f00e92f1691 889 PANTHER PTHR23115 744 880 5.3E-204 T 19-04-2016 APA12_RS12690 9371632c7b307980b0ab0f00e92f1691 889 PANTHER PTHR23115 373 719 5.3E-204 T 19-04-2016 APA12_RS12690 9371632c7b307980b0ab0f00e92f1691 889 SUPERFAMILY SSF52540 385 561 5.57E-50 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS12690 9371632c7b307980b0ab0f00e92f1691 889 Gene3D G3DSA:3.40.50.300 387 548 9.8E-45 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS12690 9371632c7b307980b0ab0f00e92f1691 889 ProSitePatterns PS01176 Initiation factor 2 signature. 842 864 - T 19-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 APA12_RS12690 9371632c7b307980b0ab0f00e92f1691 889 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 11 889 17.108 T 19-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 APA12_RS12690 9371632c7b307980b0ab0f00e92f1691 889 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 391 543 1.7E-30 T 19-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APA12_RS12690 9371632c7b307980b0ab0f00e92f1691 889 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 312 362 1.1E-16 T 19-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal APA12_RS12690 9371632c7b307980b0ab0f00e92f1691 889 Gene3D G3DSA:2.40.30.10 560 653 7.5E-24 T 19-04-2016 APA12_RS12690 9371632c7b307980b0ab0f00e92f1691 889 Gene3D G3DSA:2.40.30.10 793 885 7.9E-37 T 19-04-2016 APA12_RS12690 9371632c7b307980b0ab0f00e92f1691 889 Gene3D G3DSA:3.40.50.10050 692 770 7.5E-24 T 19-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 APA12_RS00180 1c1b6945f9c18367a2260baa28b7ca31 297 PANTHER PTHR12715:SF4 9 282 2.8E-50 T 19-04-2016 APA12_RS00180 1c1b6945f9c18367a2260baa28b7ca31 297 Pfam PF00892 EamA-like transporter family 150 281 1.4E-16 T 19-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APA12_RS00180 1c1b6945f9c18367a2260baa28b7ca31 297 Pfam PF00892 EamA-like transporter family 9 138 4.1E-23 T 19-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APA12_RS00180 1c1b6945f9c18367a2260baa28b7ca31 297 PANTHER PTHR12715 9 282 2.8E-50 T 19-04-2016 APA12_RS00180 1c1b6945f9c18367a2260baa28b7ca31 297 SUPERFAMILY SSF103481 184 287 6.54E-12 T 19-04-2016 APA12_RS00180 1c1b6945f9c18367a2260baa28b7ca31 297 SUPERFAMILY SSF103481 43 141 6.28E-17 T 19-04-2016 APA12_RS02070 c8b168ee5f2b14a67eb6edc8b02efa71 310 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 125 140 - T 19-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 APA12_RS02070 c8b168ee5f2b14a67eb6edc8b02efa71 310 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 1 310 6.1E-115 T 19-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 APA12_RS02070 c8b168ee5f2b14a67eb6edc8b02efa71 310 Gene3D G3DSA:3.40.50.2020 1 155 3.6E-76 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like APA12_RS02070 c8b168ee5f2b14a67eb6edc8b02efa71 310 Gene3D G3DSA:3.40.50.2020 156 283 2.0E-46 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like APA12_RS02070 c8b168ee5f2b14a67eb6edc8b02efa71 310 PANTHER PTHR10210 1 310 1.6E-169 T 19-04-2016 APA12_RS02070 c8b168ee5f2b14a67eb6edc8b02efa71 310 Pfam PF00156 Phosphoribosyl transferase domain 151 274 1.1E-22 T 19-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APA12_RS02070 c8b168ee5f2b14a67eb6edc8b02efa71 310 SMART SM01400 1 117 3.0E-79 T 19-04-2016 APA12_RS02070 c8b168ee5f2b14a67eb6edc8b02efa71 310 PANTHER PTHR10210:SF41 1 310 1.6E-169 T 19-04-2016 APA12_RS02070 c8b168ee5f2b14a67eb6edc8b02efa71 310 SUPERFAMILY SSF53271 66 297 2.73E-58 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like APA12_RS02070 c8b168ee5f2b14a67eb6edc8b02efa71 310 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 1 310 47.055 T 19-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 APA12_RS02070 c8b168ee5f2b14a67eb6edc8b02efa71 310 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 1 117 5.1E-50 T 19-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 APA12_RS06340 7a52df1a07910178a516bacf9f5dea87 272 Gene3D G3DSA:1.20.1080.10 6 257 5.5E-73 T 19-04-2016 IPR023271 Aquaporin-like APA12_RS06340 7a52df1a07910178a516bacf9f5dea87 272 SUPERFAMILY SSF81338 9 257 2.88E-61 T 19-04-2016 IPR023271 Aquaporin-like APA12_RS06340 7a52df1a07910178a516bacf9f5dea87 272 PRINTS PR00783 Major intrinsic protein family signature 89 108 2.3E-41 T 19-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APA12_RS06340 7a52df1a07910178a516bacf9f5dea87 272 PRINTS PR00783 Major intrinsic protein family signature 187 209 2.3E-41 T 19-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APA12_RS06340 7a52df1a07910178a516bacf9f5dea87 272 PRINTS PR00783 Major intrinsic protein family signature 52 76 2.3E-41 T 19-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APA12_RS06340 7a52df1a07910178a516bacf9f5dea87 272 PRINTS PR00783 Major intrinsic protein family signature 235 255 2.3E-41 T 19-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APA12_RS06340 7a52df1a07910178a516bacf9f5dea87 272 PRINTS PR00783 Major intrinsic protein family signature 153 171 2.3E-41 T 19-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APA12_RS06340 7a52df1a07910178a516bacf9f5dea87 272 PRINTS PR00783 Major intrinsic protein family signature 10 29 2.3E-41 T 19-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APA12_RS06340 7a52df1a07910178a516bacf9f5dea87 272 ProSitePatterns PS00221 MIP family signature. 70 78 - T 19-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 APA12_RS06340 7a52df1a07910178a516bacf9f5dea87 272 PANTHER PTHR19139 6 256 6.5E-77 T 19-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APA12_RS06340 7a52df1a07910178a516bacf9f5dea87 272 TIGRFAM TIGR00861 MIP: MIP family channel proteins 14 252 2.9E-58 T 19-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APA12_RS06340 7a52df1a07910178a516bacf9f5dea87 272 PANTHER PTHR19139:SF100 6 256 6.5E-77 T 19-04-2016 APA12_RS06340 7a52df1a07910178a516bacf9f5dea87 272 Pfam PF00230 Major intrinsic protein 7 252 1.5E-48 T 19-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APA12_RS05655 94642c8ab528e730852197d6dbb61fb0 291 Pfam PF08241 Methyltransferase domain 52 136 6.0E-14 T 19-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 APA12_RS05655 94642c8ab528e730852197d6dbb61fb0 291 PANTHER PTHR13090 6 283 1.4E-69 T 19-04-2016 APA12_RS05655 94642c8ab528e730852197d6dbb61fb0 291 SUPERFAMILY SSF53335 30 206 5.79E-26 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS05655 94642c8ab528e730852197d6dbb61fb0 291 Gene3D G3DSA:3.40.50.150 34 230 3.2E-24 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS00950 1e8692fc3e0027a647cff63af99fd334 164 SUPERFAMILY SSF46785 6 149 1.69E-33 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS00950 1e8692fc3e0027a647cff63af99fd334 164 ProSitePatterns PS01117 MarR-type HTH domain signature. 74 108 - T 19-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site APA12_RS00950 1e8692fc3e0027a647cff63af99fd334 164 PANTHER PTHR33164:SF16 6 159 5.1E-27 T 19-04-2016 APA12_RS00950 1e8692fc3e0027a647cff63af99fd334 164 Pfam PF12802 MarR family 40 99 7.4E-11 T 19-04-2016 APA12_RS00950 1e8692fc3e0027a647cff63af99fd334 164 PANTHER PTHR33164 6 159 5.1E-27 T 19-04-2016 APA12_RS00950 1e8692fc3e0027a647cff63af99fd334 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 59 75 2.6E-16 T 19-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APA12_RS00950 1e8692fc3e0027a647cff63af99fd334 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 76 91 2.6E-16 T 19-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APA12_RS00950 1e8692fc3e0027a647cff63af99fd334 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 95 111 2.6E-16 T 19-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APA12_RS00950 1e8692fc3e0027a647cff63af99fd334 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 125 145 2.6E-16 T 19-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APA12_RS00950 1e8692fc3e0027a647cff63af99fd334 164 SMART SM00347 34 135 2.4E-24 T 19-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APA12_RS00950 1e8692fc3e0027a647cff63af99fd334 164 Gene3D G3DSA:1.10.10.10 11 149 1.7E-36 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS00240 f597437a0095b037331e388e17d4e1c9 715 Pfam PF13632 Glycosyl transferase family group 2 234 428 1.4E-13 T 19-04-2016 IPR001173 Glycosyltransferase 2-like APA12_RS00240 f597437a0095b037331e388e17d4e1c9 715 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 1 638 45.34 T 19-04-2016 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 UniPathway: UPA00637 APA12_RS00240 f597437a0095b037331e388e17d4e1c9 715 PANTHER PTHR10587 37 309 1.6E-103 T 19-04-2016 APA12_RS00240 f597437a0095b037331e388e17d4e1c9 715 PANTHER PTHR10587 359 623 1.6E-103 T 19-04-2016 APA12_RS00240 f597437a0095b037331e388e17d4e1c9 715 PANTHER PTHR10587:SF63 37 309 1.6E-103 T 19-04-2016 APA12_RS00240 f597437a0095b037331e388e17d4e1c9 715 PANTHER PTHR10587:SF63 359 623 1.6E-103 T 19-04-2016 APA12_RS00240 f597437a0095b037331e388e17d4e1c9 715 SUPERFAMILY SSF53448 136 421 1.91E-23 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS05350 b918556791def984bbeeba7490a3bbd4 326 Gene3D G3DSA:3.40.50.720 2 138 5.2E-37 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS05350 b918556791def984bbeeba7490a3bbd4 326 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 121 5.6E-31 T 19-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 APA12_RS05350 b918556791def984bbeeba7490a3bbd4 326 Gene3D G3DSA:3.30.360.10 139 308 6.2E-24 T 19-04-2016 APA12_RS05350 b918556791def984bbeeba7490a3bbd4 326 SUPERFAMILY SSF55347 146 248 3.27E-14 T 19-04-2016 APA12_RS05350 b918556791def984bbeeba7490a3bbd4 326 PANTHER PTHR22604:SF14 1 319 2.3E-68 T 19-04-2016 APA12_RS05350 b918556791def984bbeeba7490a3bbd4 326 SUPERFAMILY SSF51735 3 159 7.58E-40 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS05350 b918556791def984bbeeba7490a3bbd4 326 PANTHER PTHR22604 1 319 2.3E-68 T 19-04-2016 APA12_RS01590 85123ee1b610d7b04f641aca944463fd 394 PANTHER PTHR11476:SF5 25 332 4.9E-42 T 19-04-2016 APA12_RS01590 85123ee1b610d7b04f641aca944463fd 394 SUPERFAMILY SSF55681 24 310 2.49E-41 T 19-04-2016 APA12_RS01590 85123ee1b610d7b04f641aca944463fd 394 Gene3D G3DSA:3.30.930.10 43 326 2.6E-45 T 19-04-2016 APA12_RS01590 85123ee1b610d7b04f641aca944463fd 394 PANTHER PTHR11476 25 332 4.9E-42 T 19-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 APA12_RS01590 85123ee1b610d7b04f641aca944463fd 394 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 34 375 23.008 T 19-04-2016 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 UniPathway: UPA00031 APA12_RS01590 85123ee1b610d7b04f641aca944463fd 394 Pfam PF13393 Histidyl-tRNA synthetase 27 327 4.2E-86 T 19-04-2016 APA12_RS11785 338046db4f1c115c46897f034b081433 333 Gene3D G3DSA:3.90.180.10 1 151 4.7E-45 T 19-04-2016 IPR011032 GroES-like APA12_RS11785 338046db4f1c115c46897f034b081433 333 PANTHER PTHR11695:SF610 15 330 2.1E-130 T 19-04-2016 APA12_RS11785 338046db4f1c115c46897f034b081433 333 PANTHER PTHR11695 15 330 2.1E-130 T 19-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APA12_RS11785 338046db4f1c115c46897f034b081433 333 SMART SM00829 10 326 6.8E-37 T 19-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APA12_RS11785 338046db4f1c115c46897f034b081433 333 Pfam PF00107 Zinc-binding dehydrogenase 154 272 1.5E-25 T 19-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APA12_RS11785 338046db4f1c115c46897f034b081433 333 SUPERFAMILY SSF51735 115 291 2.33E-42 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS11785 338046db4f1c115c46897f034b081433 333 Gene3D G3DSA:3.40.50.720 152 265 1.9E-25 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS11785 338046db4f1c115c46897f034b081433 333 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 1 328 2.8E-137 T 19-04-2016 IPR014189 Quinone oxidoreductase PIG3 KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- APA12_RS11785 338046db4f1c115c46897f034b081433 333 SUPERFAMILY SSF50129 1 136 6.7E-35 T 19-04-2016 IPR011032 GroES-like APA12_RS13235 e55010e79ede4717a517c0c1ba484e4b 166 PANTHER PTHR33540 6 160 4.1E-35 T 19-04-2016 APA12_RS13235 e55010e79ede4717a517c0c1ba484e4b 166 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 18 137 1.8E-32 T 19-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 APA12_RS13235 e55010e79ede4717a517c0c1ba484e4b 166 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 17 148 9.2E-28 T 19-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 APA12_RS13235 e55010e79ede4717a517c0c1ba484e4b 166 Gene3D G3DSA:3.40.50.300 13 156 3.2E-42 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS13235 e55010e79ede4717a517c0c1ba484e4b 166 SUPERFAMILY SSF52540 33 149 2.31E-15 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS01900 c3c0dc7ccebcee807b00513408192965 292 SMART SM00450 147 274 4.1E-17 T 19-04-2016 IPR001763 Rhodanese-like domain APA12_RS01900 c3c0dc7ccebcee807b00513408192965 292 SMART SM00450 6 124 4.8E-11 T 19-04-2016 IPR001763 Rhodanese-like domain APA12_RS01900 c3c0dc7ccebcee807b00513408192965 292 SUPERFAMILY SSF52821 4 174 1.96E-30 T 19-04-2016 IPR001763 Rhodanese-like domain APA12_RS01900 c3c0dc7ccebcee807b00513408192965 292 PANTHER PTHR11364 1 280 2.4E-61 T 19-04-2016 APA12_RS01900 c3c0dc7ccebcee807b00513408192965 292 Pfam PF00581 Rhodanese-like domain 7 120 8.8E-21 T 19-04-2016 IPR001763 Rhodanese-like domain APA12_RS01900 c3c0dc7ccebcee807b00513408192965 292 Pfam PF00581 Rhodanese-like domain 152 270 4.4E-16 T 19-04-2016 IPR001763 Rhodanese-like domain APA12_RS01900 c3c0dc7ccebcee807b00513408192965 292 Gene3D G3DSA:3.40.250.10 145 279 2.7E-28 T 19-04-2016 IPR001763 Rhodanese-like domain APA12_RS01900 c3c0dc7ccebcee807b00513408192965 292 Gene3D G3DSA:3.40.250.10 2 138 2.2E-30 T 19-04-2016 IPR001763 Rhodanese-like domain APA12_RS01900 c3c0dc7ccebcee807b00513408192965 292 SUPERFAMILY SSF52821 150 282 3.14E-29 T 19-04-2016 IPR001763 Rhodanese-like domain APA12_RS01900 c3c0dc7ccebcee807b00513408192965 292 PANTHER PTHR11364:SF0 1 280 2.4E-61 T 19-04-2016 APA12_RS08795 f57de66df9ed196af8fccbdf2e5c34ed 139 PANTHER PTHR21256 8 116 2.3E-59 T 19-04-2016 APA12_RS08795 f57de66df9ed196af8fccbdf2e5c34ed 139 SUPERFAMILY SSF141734 14 126 2.22E-48 T 19-04-2016 APA12_RS08795 f57de66df9ed196af8fccbdf2e5c34ed 139 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 14 117 32.033 T 19-04-2016 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 APA12_RS08795 f57de66df9ed196af8fccbdf2e5c34ed 139 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 40 113 4.5E-35 T 19-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 APA12_RS08795 f57de66df9ed196af8fccbdf2e5c34ed 139 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 63 113 3.0E-20 T 19-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 APA12_RS00560 b000f6db4011894abb9a62a6a85b337b 675 Gene3D G3DSA:3.40.50.1820 415 668 2.9E-63 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS00560 b000f6db4011894abb9a62a6a85b337b 675 SUPERFAMILY SSF53474 416 669 4.38E-64 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS00560 b000f6db4011894abb9a62a6a85b337b 675 SUPERFAMILY SSF69322 119 369 2.22E-9 T 19-04-2016 APA12_RS00560 b000f6db4011894abb9a62a6a85b337b 675 PANTHER PTHR11731 38 671 7.4E-143 T 19-04-2016 APA12_RS00560 b000f6db4011894abb9a62a6a85b337b 675 PANTHER PTHR11731:SF75 38 671 7.4E-143 T 19-04-2016 APA12_RS00560 b000f6db4011894abb9a62a6a85b337b 675 Gene3D G3DSA:2.120.10.30 131 324 3.2E-9 T 19-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APA12_RS00560 b000f6db4011894abb9a62a6a85b337b 675 Pfam PF07676 WD40-like Beta Propeller Repeat 204 218 0.28 T 19-04-2016 IPR011659 WD40-like Beta Propeller APA12_RS00560 b000f6db4011894abb9a62a6a85b337b 675 Pfam PF00326 Prolyl oligopeptidase family 464 670 2.4E-48 T 19-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 APA12_RS13170 e7931dae0282d87215e47d1df0e8a05d 360 PANTHER PTHR11933:SF10 1 354 6.3E-136 T 19-04-2016 APA12_RS13170 e7931dae0282d87215e47d1df0e8a05d 360 Gene3D G3DSA:3.40.50.620 1 208 1.9E-72 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS13170 e7931dae0282d87215e47d1df0e8a05d 360 SUPERFAMILY SSF52402 1 242 1.87E-44 T 19-04-2016 APA12_RS13170 e7931dae0282d87215e47d1df0e8a05d 360 Pfam PF03054 tRNA methyl transferase 1 351 1.1E-97 T 19-04-2016 APA12_RS13170 e7931dae0282d87215e47d1df0e8a05d 360 PANTHER PTHR11933 1 354 6.3E-136 T 19-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 APA12_RS13170 e7931dae0282d87215e47d1df0e8a05d 360 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 1 352 36.322 T 19-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 APA12_RS13170 e7931dae0282d87215e47d1df0e8a05d 360 Gene3D G3DSA:2.40.30.10 278 355 7.2E-19 T 19-04-2016 APA12_RS13170 e7931dae0282d87215e47d1df0e8a05d 360 Gene3D G3DSA:2.30.30.280 216 274 1.5E-10 T 19-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 APA12_RS13170 e7931dae0282d87215e47d1df0e8a05d 360 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1 351 9.3E-84 T 19-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 APA12_RS07135 a56084a5679af7b7068827865a488d37 179 PANTHER PTHR30466 16 175 6.9E-53 T 19-04-2016 APA12_RS07135 a56084a5679af7b7068827865a488d37 179 Gene3D G3DSA:2.30.110.10 23 176 2.6E-52 T 19-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APA12_RS07135 a56084a5679af7b7068827865a488d37 179 SMART SM00903 27 175 3.3E-54 T 19-04-2016 IPR002563 Flavin reductase like domain GO:0010181 APA12_RS07135 a56084a5679af7b7068827865a488d37 179 PANTHER PTHR30466:SF2 16 175 6.9E-53 T 19-04-2016 APA12_RS07135 a56084a5679af7b7068827865a488d37 179 SUPERFAMILY SSF50475 19 174 1.52E-46 T 19-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APA12_RS07135 a56084a5679af7b7068827865a488d37 179 Pfam PF01613 Flavin reductase like domain 27 175 2.8E-37 T 19-04-2016 IPR002563 Flavin reductase like domain GO:0010181 APA12_RS06210 adc3d8a86cdffd7d608c03ec68c5963f 372 ProSitePatterns PS00617 RecF protein signature 1. 121 141 - T 19-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 APA12_RS06210 adc3d8a86cdffd7d608c03ec68c5963f 372 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 5 348 4.4E-50 T 19-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 APA12_RS06210 adc3d8a86cdffd7d608c03ec68c5963f 372 PANTHER PTHR32182 3 347 2.7E-30 T 19-04-2016 APA12_RS06210 adc3d8a86cdffd7d608c03ec68c5963f 372 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 372 75.076 T 19-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 APA12_RS06210 adc3d8a86cdffd7d608c03ec68c5963f 372 Gene3D G3DSA:3.40.50.300 238 347 6.0E-38 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS06210 adc3d8a86cdffd7d608c03ec68c5963f 372 Gene3D G3DSA:3.40.50.300 3 171 6.0E-38 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS06210 adc3d8a86cdffd7d608c03ec68c5963f 372 SUPERFAMILY SSF52540 3 348 7.21E-37 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS06210 adc3d8a86cdffd7d608c03ec68c5963f 372 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 27 338 3.5E-12 T 19-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APA12_RS06210 adc3d8a86cdffd7d608c03ec68c5963f 372 PANTHER PTHR32182:SF0 3 347 2.7E-30 T 19-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 APA12_RS07335 6049206c495e7967d281727082c4bc8c 414 SUPERFAMILY SSF53790 13 212 4.06E-37 T 19-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 APA12_RS07335 6049206c495e7967d281727082c4bc8c 414 PANTHER PTHR14741:SF34 232 375 4.0E-44 T 19-04-2016 APA12_RS07335 6049206c495e7967d281727082c4bc8c 414 PIRSF PIRSF036428 10 412 8.3E-131 T 19-04-2016 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase GO:0008276|GO:0009236 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|KEGG: 00860+2.1.1.132|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00148 APA12_RS07335 6049206c495e7967d281727082c4bc8c 414 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 249 359 2.3E-5 T 19-04-2016 APA12_RS07335 6049206c495e7967d281727082c4bc8c 414 Gene3D G3DSA:3.40.50.150 239 381 3.3E-21 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS07335 6049206c495e7967d281727082c4bc8c 414 Gene3D G3DSA:3.40.1010.10 12 117 1.3E-23 T 19-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 APA12_RS07335 6049206c495e7967d281727082c4bc8c 414 Gene3D G3DSA:3.30.950.10 118 217 5.7E-19 T 19-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 APA12_RS07335 6049206c495e7967d281727082c4bc8c 414 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 241 361 3.0E-34 T 19-04-2016 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.196|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 APA12_RS07335 6049206c495e7967d281727082c4bc8c 414 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 16 200 1.1E-41 T 19-04-2016 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 APA12_RS07335 6049206c495e7967d281727082c4bc8c 414 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 14 193 1.1E-14 T 19-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 APA12_RS07335 6049206c495e7967d281727082c4bc8c 414 PANTHER PTHR14741 232 375 4.0E-44 T 19-04-2016 APA12_RS07335 6049206c495e7967d281727082c4bc8c 414 SUPERFAMILY SSF53335 225 408 2.57E-30 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS11270 8870ef02aa052bafdb6b036327890277 475 PANTHER PTHR11699:SF109 1 473 9.9E-239 T 19-04-2016 IPR015657 Aminobutyraldehyde dehydrogenase KEGG: 00330+1.2.1.19|KEGG: 00410+1.2.1.19|MetaCyc: PWY-2|MetaCyc: PWY-3|UniPathway: UPA00188 APA12_RS11270 8870ef02aa052bafdb6b036327890277 475 Gene3D G3DSA:3.40.309.10 259 437 9.2E-52 T 19-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APA12_RS11270 8870ef02aa052bafdb6b036327890277 475 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 19-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 APA12_RS11270 8870ef02aa052bafdb6b036327890277 475 Pfam PF00171 Aldehyde dehydrogenase family 13 469 2.7E-146 T 19-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APA12_RS11270 8870ef02aa052bafdb6b036327890277 475 Gene3D G3DSA:3.40.605.10 3 258 2.9E-91 T 19-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APA12_RS11270 8870ef02aa052bafdb6b036327890277 475 PANTHER PTHR11699 1 473 9.9E-239 T 19-04-2016 APA12_RS11270 8870ef02aa052bafdb6b036327890277 475 SUPERFAMILY SSF53720 2 473 1.96E-142 T 19-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APA12_RS00265 b9bc6e6a9288f00b8488aae305a6832f 107 PANTHER PTHR33449 1 107 2.3E-40 T 19-04-2016 APA12_RS00265 b9bc6e6a9288f00b8488aae305a6832f 107 PANTHER PTHR33449:SF1 1 107 2.3E-40 T 19-04-2016 APA12_RS00265 b9bc6e6a9288f00b8488aae305a6832f 107 Pfam PF02575 YbaB/EbfC DNA-binding family 8 98 3.1E-32 T 19-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APA12_RS00265 b9bc6e6a9288f00b8488aae305a6832f 107 SUPERFAMILY SSF82607 8 101 4.97E-31 T 19-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APA12_RS00265 b9bc6e6a9288f00b8488aae305a6832f 107 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 2 96 21.598 T 19-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APA12_RS00265 b9bc6e6a9288f00b8488aae305a6832f 107 Gene3D G3DSA:3.30.1310.10 1 107 5.8E-41 T 19-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APA12_RS00265 b9bc6e6a9288f00b8488aae305a6832f 107 PIRSF PIRSF004555 1 107 1.9E-36 T 19-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APA12_RS00265 b9bc6e6a9288f00b8488aae305a6832f 107 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 103 6.5E-27 T 19-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APA12_RS05845 3b1ddc8c8e4d9f13ab922fccbb7dea14 216 TIGRFAM TIGR04508 queE_Cx14CxxC: 7-carboxy-7-deazaguanine synthase 3 216 1.8E-107 T 19-04-2016 IPR030977 7-carboxy-7-deazaguanine synthase, Cx14CxxC-type GO:0008616|GO:0046872 KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 APA12_RS05845 3b1ddc8c8e4d9f13ab922fccbb7dea14 216 Gene3D G3DSA:3.80.30.10 93 134 8.4E-8 T 19-04-2016 APA12_RS05845 3b1ddc8c8e4d9f13ab922fccbb7dea14 216 PANTHER PTHR11228:SF6 1 160 6.1E-23 T 19-04-2016 APA12_RS05845 3b1ddc8c8e4d9f13ab922fccbb7dea14 216 SUPERFAMILY SSF102114 46 145 3.73E-7 T 19-04-2016 APA12_RS05845 3b1ddc8c8e4d9f13ab922fccbb7dea14 216 PANTHER PTHR11228 1 160 6.1E-23 T 19-04-2016 APA12_RS05845 3b1ddc8c8e4d9f13ab922fccbb7dea14 216 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 216 30.198 T 19-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 APA12_RS13610 e9d747627c517ea060c99baf83a4ea88 466 TIGRFAM TIGR01613 primase_Cterm: phage/plasmid primase, P4 family, C-terminal domain 126 424 1.4E-86 T 19-04-2016 IPR006500 DNA primase, phage/plasmid APA12_RS13610 e9d747627c517ea060c99baf83a4ea88 466 SMART SM00885 36 176 2.2E-36 T 19-04-2016 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal APA12_RS13610 e9d747627c517ea060c99baf83a4ea88 466 Gene3D G3DSA:3.40.50.300 166 354 3.5E-8 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS13610 e9d747627c517ea060c99baf83a4ea88 466 Pfam PF08706 D5 N terminal like 36 174 3.2E-26 T 19-04-2016 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal APA12_RS13610 e9d747627c517ea060c99baf83a4ea88 466 SUPERFAMILY SSF52540 162 337 1.19E-6 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS13610 e9d747627c517ea060c99baf83a4ea88 466 PANTHER PTHR35372:SF2 30 417 2.2E-110 T 19-04-2016 APA12_RS13610 e9d747627c517ea060c99baf83a4ea88 466 PANTHER PTHR35372 30 417 2.2E-110 T 19-04-2016 APA12_RS10830 14904ec6f1de46cb0aa859a8d3f49ee3 410 PANTHER PTHR11751:SF302 13 393 1.3E-207 T 19-04-2016 APA12_RS10830 14904ec6f1de46cb0aa859a8d3f49ee3 410 Gene3D G3DSA:3.90.1150.10 259 390 9.8E-42 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APA12_RS10830 14904ec6f1de46cb0aa859a8d3f49ee3 410 Gene3D G3DSA:3.40.640.10 45 258 1.4E-60 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APA12_RS10830 14904ec6f1de46cb0aa859a8d3f49ee3 410 SUPERFAMILY SSF53383 3 389 3.71E-108 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APA12_RS10830 14904ec6f1de46cb0aa859a8d3f49ee3 410 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 19-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 APA12_RS10830 14904ec6f1de46cb0aa859a8d3f49ee3 410 PANTHER PTHR11751 13 393 1.3E-207 T 19-04-2016 APA12_RS10830 14904ec6f1de46cb0aa859a8d3f49ee3 410 Pfam PF00155 Aminotransferase class I and II 32 385 2.5E-57 T 19-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APA12_RS09645 f48a1f8ad834a64e16a3f5a169ed2ba2 477 Pfam PF02875 Mur ligase family, glutamate ligase domain 319 402 6.4E-19 T 19-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APA12_RS09645 f48a1f8ad834a64e16a3f5a169ed2ba2 477 SUPERFAMILY SSF51984 10 95 2.62E-27 T 19-04-2016 APA12_RS09645 f48a1f8ad834a64e16a3f5a169ed2ba2 477 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 8 466 40.559 T 19-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APA12_RS09645 f48a1f8ad834a64e16a3f5a169ed2ba2 477 PANTHER PTHR23135 3 454 4.6E-194 T 19-04-2016 APA12_RS09645 f48a1f8ad834a64e16a3f5a169ed2ba2 477 Gene3D G3DSA:3.90.190.20 321 464 1.7E-50 T 19-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APA12_RS09645 f48a1f8ad834a64e16a3f5a169ed2ba2 477 Pfam PF01225 Mur ligase family, catalytic domain 10 108 2.4E-30 T 19-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APA12_RS09645 f48a1f8ad834a64e16a3f5a169ed2ba2 477 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 11 459 7.7E-158 T 19-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APA12_RS09645 f48a1f8ad834a64e16a3f5a169ed2ba2 477 SUPERFAMILY SSF53244 318 463 8.93E-44 T 19-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APA12_RS09645 f48a1f8ad834a64e16a3f5a169ed2ba2 477 SUPERFAMILY SSF53623 94 317 4.32E-67 T 19-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APA12_RS09645 f48a1f8ad834a64e16a3f5a169ed2ba2 477 Gene3D G3DSA:3.40.50.720 10 96 1.5E-35 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS09645 f48a1f8ad834a64e16a3f5a169ed2ba2 477 Pfam PF08245 Mur ligase middle domain 113 299 4.8E-27 T 19-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APA12_RS09645 f48a1f8ad834a64e16a3f5a169ed2ba2 477 Gene3D G3DSA:3.40.1190.10 97 320 1.0E-79 T 19-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APA12_RS09645 f48a1f8ad834a64e16a3f5a169ed2ba2 477 PANTHER PTHR23135:SF5 3 454 4.6E-194 T 19-04-2016 APA12_RS11405 0d27f093b7f9ea816449f2a9c1289fc1 506 PANTHER PTHR21343:SF1 1 500 1.5E-188 T 19-04-2016 APA12_RS11405 0d27f093b7f9ea816449f2a9c1289fc1 506 SUPERFAMILY SSF52540 1 232 9.65E-50 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS11405 0d27f093b7f9ea816449f2a9c1289fc1 506 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 503 178.915 T 19-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 APA12_RS11405 0d27f093b7f9ea816449f2a9c1289fc1 506 SUPERFAMILY SSF52317 259 448 7.92E-40 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like APA12_RS11405 0d27f093b7f9ea816449f2a9c1289fc1 506 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 258 441 6.0E-56 T 19-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 APA12_RS11405 0d27f093b7f9ea816449f2a9c1289fc1 506 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 1 215 6.8E-27 T 19-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain APA12_RS11405 0d27f093b7f9ea816449f2a9c1289fc1 506 Gene3D G3DSA:3.40.50.880 258 446 6.0E-29 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like APA12_RS11405 0d27f093b7f9ea816449f2a9c1289fc1 506 PANTHER PTHR21343 1 500 1.5E-188 T 19-04-2016 APA12_RS11405 0d27f093b7f9ea816449f2a9c1289fc1 506 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 1 495 1.6E-130 T 19-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 APA12_RS11405 0d27f093b7f9ea816449f2a9c1289fc1 506 Gene3D G3DSA:3.40.50.300 1 227 7.0E-44 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS01950 a8627ffdbd209a8429827126b6f09888 420 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 417 5.4E-174 T 19-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APA12_RS01950 a8627ffdbd209a8429827126b6f09888 420 PANTHER PTHR21090 1 420 4.4E-188 T 19-04-2016 APA12_RS01950 a8627ffdbd209a8429827126b6f09888 420 Gene3D G3DSA:3.65.10.10 21 223 1.3E-67 T 19-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APA12_RS01950 a8627ffdbd209a8429827126b6f09888 420 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 408 6.6E-101 T 19-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APA12_RS01950 a8627ffdbd209a8429827126b6f09888 420 Gene3D G3DSA:3.65.10.10 224 418 1.9E-58 T 19-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APA12_RS01950 a8627ffdbd209a8429827126b6f09888 420 PANTHER PTHR21090:SF19 1 420 4.4E-188 T 19-04-2016 APA12_RS01950 a8627ffdbd209a8429827126b6f09888 420 SUPERFAMILY SSF55205 1 419 1.14E-138 T 19-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 APA12_RS01950 a8627ffdbd209a8429827126b6f09888 420 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 418 45.906 T 19-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APA12_RS08230 f5019dd0ad62faaa8308fce25bb05f6d 240 PANTHER PTHR24220 8 225 6.2E-90 T 19-04-2016 APA12_RS08230 f5019dd0ad62faaa8308fce25bb05f6d 240 SMART SM00382 36 224 1.5E-13 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS08230 f5019dd0ad62faaa8308fce25bb05f6d 240 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APA12_RS08230 f5019dd0ad62faaa8308fce25bb05f6d 240 Pfam PF00005 ABC transporter 27 175 1.4E-29 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS08230 f5019dd0ad62faaa8308fce25bb05f6d 240 SUPERFAMILY SSF52540 6 229 6.46E-64 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS08230 f5019dd0ad62faaa8308fce25bb05f6d 240 Gene3D G3DSA:3.40.50.300 6 226 7.2E-64 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS08230 f5019dd0ad62faaa8308fce25bb05f6d 240 PANTHER PTHR24220:SF111 8 225 6.2E-90 T 19-04-2016 APA12_RS07890 64df8cc376a99a66dc555517f735a1c9 837 Pfam PF07715 TonB-dependent Receptor Plug Domain 87 207 2.4E-21 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS07890 64df8cc376a99a66dc555517f735a1c9 837 PANTHER PTHR30069:SF4 65 837 9.0E-131 T 19-04-2016 APA12_RS07890 64df8cc376a99a66dc555517f735a1c9 837 SUPERFAMILY SSF56935 73 610 9.16E-90 T 19-04-2016 APA12_RS07890 64df8cc376a99a66dc555517f735a1c9 837 SUPERFAMILY SSF56935 638 817 9.16E-90 T 19-04-2016 APA12_RS07890 64df8cc376a99a66dc555517f735a1c9 837 Pfam PF00593 TonB dependent receptor 512 809 1.1E-25 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS07890 64df8cc376a99a66dc555517f735a1c9 837 PANTHER PTHR30069 65 837 9.0E-131 T 19-04-2016 APA12_RS07890 64df8cc376a99a66dc555517f735a1c9 837 Gene3D G3DSA:2.40.170.20 210 837 2.8E-74 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS07890 64df8cc376a99a66dc555517f735a1c9 837 Gene3D G3DSA:2.170.130.10 87 209 3.7E-33 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS08780 d95d164f11bf1ba688a4e0d516719ad1 353 Pfam PF00534 Glycosyl transferases group 1 176 328 3.3E-34 T 19-04-2016 IPR001296 Glycosyl transferase, family 1 APA12_RS08780 d95d164f11bf1ba688a4e0d516719ad1 353 PANTHER PTHR12526 112 334 7.4E-43 T 19-04-2016 APA12_RS08780 d95d164f11bf1ba688a4e0d516719ad1 353 Gene3D G3DSA:3.40.50.2000 177 328 2.7E-29 T 19-04-2016 APA12_RS08780 d95d164f11bf1ba688a4e0d516719ad1 353 SUPERFAMILY SSF53756 15 348 2.62E-60 T 19-04-2016 APA12_RS10980 4b5cd6e0a014fe0cd89f77c09ca476f5 447 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 18 128 2.2E-37 T 19-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II APA12_RS10980 4b5cd6e0a014fe0cd89f77c09ca476f5 447 Gene3D G3DSA:3.50.50.60 397 439 4.0E-7 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS10980 4b5cd6e0a014fe0cd89f77c09ca476f5 447 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 141 432 2.8E-34 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS10980 4b5cd6e0a014fe0cd89f77c09ca476f5 447 SUPERFAMILY SSF51971 138 380 1.35E-54 T 19-04-2016 APA12_RS10980 4b5cd6e0a014fe0cd89f77c09ca476f5 447 PANTHER PTHR11938 1 443 3.1E-88 T 19-04-2016 APA12_RS10980 4b5cd6e0a014fe0cd89f77c09ca476f5 447 PANTHER PTHR11938:SF108 1 443 3.1E-88 T 19-04-2016 APA12_RS10980 4b5cd6e0a014fe0cd89f77c09ca476f5 447 Gene3D G3DSA:3.40.50.720 143 235 3.2E-22 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS10980 4b5cd6e0a014fe0cd89f77c09ca476f5 447 Gene3D G3DSA:3.50.50.60 236 380 2.9E-35 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS10980 4b5cd6e0a014fe0cd89f77c09ca476f5 447 SUPERFAMILY SSF46548 7 149 1.36E-31 T 19-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APA12_RS10980 4b5cd6e0a014fe0cd89f77c09ca476f5 447 Gene3D G3DSA:1.10.1060.10 8 142 5.1E-36 T 19-04-2016 APA12_RS10980 4b5cd6e0a014fe0cd89f77c09ca476f5 447 PRINTS PR00419 Adrenodoxin reductase family signature 275 289 5.0E-19 T 19-04-2016 APA12_RS10980 4b5cd6e0a014fe0cd89f77c09ca476f5 447 PRINTS PR00419 Adrenodoxin reductase family signature 141 163 5.0E-19 T 19-04-2016 APA12_RS10980 4b5cd6e0a014fe0cd89f77c09ca476f5 447 PRINTS PR00419 Adrenodoxin reductase family signature 164 177 5.0E-19 T 19-04-2016 APA12_RS10980 4b5cd6e0a014fe0cd89f77c09ca476f5 447 PRINTS PR00419 Adrenodoxin reductase family signature 207 217 5.0E-19 T 19-04-2016 APA12_RS08735 46aad2ee1be4c99327ee05a73a9f350d 305 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 23 302 4.0E-98 T 19-04-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 UniPathway: UPA00232 APA12_RS08735 46aad2ee1be4c99327ee05a73a9f350d 305 PANTHER PTHR11048 15 301 1.2E-101 T 19-04-2016 APA12_RS08735 46aad2ee1be4c99327ee05a73a9f350d 305 PANTHER PTHR11048:SF28 15 301 1.2E-101 T 19-04-2016 APA12_RS08735 46aad2ee1be4c99327ee05a73a9f350d 305 Pfam PF01040 UbiA prenyltransferase family 42 284 1.9E-53 T 19-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 APA12_RS08735 46aad2ee1be4c99327ee05a73a9f350d 305 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 18 303 25.735 T 19-04-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 UniPathway: UPA00232 APA12_RS08735 46aad2ee1be4c99327ee05a73a9f350d 305 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 82 104 - T 19-04-2016 IPR030470 UbiA prenyltransferase conserved site APA12_RS06510 e424d5d1939eed82c9e1e28acd510945 493 Gene3D G3DSA:1.10.150.120 86 167 4.2E-35 T 19-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 APA12_RS06510 e424d5d1939eed82c9e1e28acd510945 493 TIGRFAM TIGR02963 xanthine_xdhA: xanthine dehydrogenase, small subunit 5 473 4.7E-192 T 19-04-2016 IPR014307 Xanthine dehydrogenase, small subunit GO:0004854|GO:0004855|GO:0050660|GO:0055114 KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 APA12_RS06510 e424d5d1939eed82c9e1e28acd510945 493 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 22 59 1.5E-4 T 19-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APA12_RS06510 e424d5d1939eed82c9e1e28acd510945 493 Gene3D G3DSA:3.30.465.10 250 362 1.1E-32 T 19-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APA12_RS06510 e424d5d1939eed82c9e1e28acd510945 493 SUPERFAMILY SSF47741 96 165 3.14E-31 T 19-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 APA12_RS06510 e424d5d1939eed82c9e1e28acd510945 493 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 42 50 - T 19-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 APA12_RS06510 e424d5d1939eed82c9e1e28acd510945 493 SMART SM01092 371 473 2.7E-32 T 19-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal APA12_RS06510 e424d5d1939eed82c9e1e28acd510945 493 Gene3D G3DSA:3.10.20.30 3 85 1.2E-25 T 19-04-2016 IPR012675 Beta-grasp domain APA12_RS06510 e424d5d1939eed82c9e1e28acd510945 493 Gene3D G3DSA:3.30.43.10 202 247 2.9E-20 T 19-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 APA12_RS06510 e424d5d1939eed82c9e1e28acd510945 493 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 371 472 1.2E-31 T 19-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal APA12_RS06510 e424d5d1939eed82c9e1e28acd510945 493 SUPERFAMILY SSF54292 4 88 1.57E-18 T 19-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APA12_RS06510 e424d5d1939eed82c9e1e28acd510945 493 Pfam PF01799 [2Fe-2S] binding domain 84 157 2.8E-29 T 19-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 APA12_RS06510 e424d5d1939eed82c9e1e28acd510945 493 PANTHER PTHR11908 1 476 4.5E-127 T 19-04-2016 APA12_RS06510 e424d5d1939eed82c9e1e28acd510945 493 SUPERFAMILY SSF55447 369 475 3.53E-31 T 19-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal APA12_RS06510 e424d5d1939eed82c9e1e28acd510945 493 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 201 363 2.6E-43 T 19-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 APA12_RS06510 e424d5d1939eed82c9e1e28acd510945 493 PIRSF PIRSF036557 2 483 8.5E-181 T 19-04-2016 IPR012175 Xanthine dehydrogenase, small subunit, bacteria APA12_RS06510 e424d5d1939eed82c9e1e28acd510945 493 Gene3D G3DSA:3.30.390.50 372 473 4.8E-35 T 19-04-2016 APA12_RS06510 e424d5d1939eed82c9e1e28acd510945 493 SUPERFAMILY SSF56176 184 362 4.2E-46 T 19-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APA12_RS06510 e424d5d1939eed82c9e1e28acd510945 493 PANTHER PTHR11908:SF66 1 476 4.5E-127 T 19-04-2016 APA12_RS04640 1b044f3507eef064f32bffe8ba16404c 1057 SUPERFAMILY SSF82693 269 325 6.1E-15 T 19-04-2016 APA12_RS04640 1b044f3507eef064f32bffe8ba16404c 1057 SUPERFAMILY SSF82693 137 183 6.1E-15 T 19-04-2016 APA12_RS04640 1b044f3507eef064f32bffe8ba16404c 1057 SUPERFAMILY SSF82714 186 265 1.18E-12 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APA12_RS04640 1b044f3507eef064f32bffe8ba16404c 1057 Gene3D G3DSA:1.10.3850.10 831 1043 5.7E-43 T 19-04-2016 APA12_RS04640 1b044f3507eef064f32bffe8ba16404c 1057 Gene3D G3DSA:1.10.3850.10 278 491 1.3E-53 T 19-04-2016 APA12_RS04640 1b044f3507eef064f32bffe8ba16404c 1057 Gene3D G3DSA:3.30.2090.10 186 266 1.8E-11 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APA12_RS04640 1b044f3507eef064f32bffe8ba16404c 1057 SUPERFAMILY SSF82693 41 136 2.35E-17 T 19-04-2016 APA12_RS04640 1b044f3507eef064f32bffe8ba16404c 1057 PANTHER PTHR32063 1 1054 0.0 T 19-04-2016 APA12_RS04640 1b044f3507eef064f32bffe8ba16404c 1057 SUPERFAMILY SSF82866 291 490 2.09E-41 T 19-04-2016 APA12_RS04640 1b044f3507eef064f32bffe8ba16404c 1057 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 2.3E-36 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS04640 1b044f3507eef064f32bffe8ba16404c 1057 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 2.3E-36 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS04640 1b044f3507eef064f32bffe8ba16404c 1057 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 2.3E-36 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS04640 1b044f3507eef064f32bffe8ba16404c 1057 PRINTS PR00702 Acriflavin resistance protein family signature 358 379 2.3E-36 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS04640 1b044f3507eef064f32bffe8ba16404c 1057 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 2.3E-36 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS04640 1b044f3507eef064f32bffe8ba16404c 1057 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 2.3E-36 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS04640 1b044f3507eef064f32bffe8ba16404c 1057 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 2.3E-36 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS04640 1b044f3507eef064f32bffe8ba16404c 1057 Pfam PF00873 AcrB/AcrD/AcrF family 6 1042 2.7E-193 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS04640 1b044f3507eef064f32bffe8ba16404c 1057 PANTHER PTHR32063:SF8 1 1054 0.0 T 19-04-2016 APA12_RS04640 1b044f3507eef064f32bffe8ba16404c 1057 SUPERFAMILY SSF82866 826 1046 1.7E-41 T 19-04-2016 APA12_RS04640 1b044f3507eef064f32bffe8ba16404c 1057 Gene3D G3DSA:3.30.70.1430 41 142 4.6E-18 T 19-04-2016 APA12_RS03150 4e8ca84bc6001abf438d14dbc8c7b3c1 418 Pfam PF01266 FAD dependent oxidoreductase 3 399 7.0E-67 T 19-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 APA12_RS03150 4e8ca84bc6001abf438d14dbc8c7b3c1 418 SUPERFAMILY SSF51905 108 271 3.63E-54 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS03150 4e8ca84bc6001abf438d14dbc8c7b3c1 418 SUPERFAMILY SSF51905 2 54 3.63E-54 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS03150 4e8ca84bc6001abf438d14dbc8c7b3c1 418 SUPERFAMILY SSF51905 360 417 3.63E-54 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS03150 4e8ca84bc6001abf438d14dbc8c7b3c1 418 Gene3D G3DSA:3.30.9.10 271 317 6.8E-13 T 19-04-2016 APA12_RS03150 4e8ca84bc6001abf438d14dbc8c7b3c1 418 Gene3D G3DSA:3.30.9.10 135 191 6.8E-13 T 19-04-2016 APA12_RS03150 4e8ca84bc6001abf438d14dbc8c7b3c1 418 PANTHER PTHR13847 108 418 5.8E-190 T 19-04-2016 APA12_RS03150 4e8ca84bc6001abf438d14dbc8c7b3c1 418 SUPERFAMILY SSF54373 271 360 5.49E-14 T 19-04-2016 APA12_RS03150 4e8ca84bc6001abf438d14dbc8c7b3c1 418 PANTHER PTHR13847 1 63 5.8E-190 T 19-04-2016 APA12_RS03150 4e8ca84bc6001abf438d14dbc8c7b3c1 418 PANTHER PTHR13847:SF148 1 63 5.8E-190 T 19-04-2016 APA12_RS03150 4e8ca84bc6001abf438d14dbc8c7b3c1 418 PANTHER PTHR13847:SF148 108 418 5.8E-190 T 19-04-2016 APA12_RS03150 4e8ca84bc6001abf438d14dbc8c7b3c1 418 Gene3D G3DSA:3.50.50.60 109 131 2.4E-49 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS03150 4e8ca84bc6001abf438d14dbc8c7b3c1 418 Gene3D G3DSA:3.50.50.60 192 270 2.4E-49 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS03150 4e8ca84bc6001abf438d14dbc8c7b3c1 418 Gene3D G3DSA:3.50.50.60 2 58 2.4E-49 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS03150 4e8ca84bc6001abf438d14dbc8c7b3c1 418 Gene3D G3DSA:3.50.50.60 360 417 2.4E-49 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS08035 e7bf0e5ac83582f2e48c7c07572e2089 234 PANTHER PTHR31851 17 231 5.8E-60 T 19-04-2016 APA12_RS08035 e7bf0e5ac83582f2e48c7c07572e2089 234 Pfam PF01988 VIT family 21 228 1.0E-52 T 19-04-2016 IPR008217 Ccc1 family APA12_RS04035 335f10be5192bb9befb3971c64f43e11 226 Pfam PF04280 Tim44-like domain 80 222 3.7E-31 T 19-04-2016 IPR007379 Tim44-like domain APA12_RS04035 335f10be5192bb9befb3971c64f43e11 226 SUPERFAMILY SSF54427 21 222 1.18E-32 T 19-04-2016 IPR032710 NTF2-like domain APA12_RS04035 335f10be5192bb9befb3971c64f43e11 226 SMART SM00978 76 225 3.9E-31 T 19-04-2016 IPR007379 Tim44-like domain APA12_RS07960 cf05bc34d46adbf7141edc02d0dd1b74 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 1.9E-28 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS07960 cf05bc34d46adbf7141edc02d0dd1b74 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 1.9E-28 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS07960 cf05bc34d46adbf7141edc02d0dd1b74 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 1.9E-28 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS07960 cf05bc34d46adbf7141edc02d0dd1b74 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 199 219 1.9E-28 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS07960 cf05bc34d46adbf7141edc02d0dd1b74 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 1.9E-28 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS07960 cf05bc34d46adbf7141edc02d0dd1b74 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.9E-28 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS07960 cf05bc34d46adbf7141edc02d0dd1b74 237 Gene3D G3DSA:3.40.50.720 2 237 1.1E-59 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS07960 cf05bc34d46adbf7141edc02d0dd1b74 237 PANTHER PTHR24322:SF343 146 177 5.5E-49 T 19-04-2016 APA12_RS07960 cf05bc34d46adbf7141edc02d0dd1b74 237 PANTHER PTHR24322:SF343 11 129 5.5E-49 T 19-04-2016 APA12_RS07960 cf05bc34d46adbf7141edc02d0dd1b74 237 PANTHER PTHR24322 146 177 5.5E-49 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS07960 cf05bc34d46adbf7141edc02d0dd1b74 237 PANTHER PTHR24322 11 129 5.5E-49 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS07960 cf05bc34d46adbf7141edc02d0dd1b74 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 1.1E-6 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS07960 cf05bc34d46adbf7141edc02d0dd1b74 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 1.1E-6 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS07960 cf05bc34d46adbf7141edc02d0dd1b74 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 1.1E-6 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS07960 cf05bc34d46adbf7141edc02d0dd1b74 237 SUPERFAMILY SSF51735 6 236 5.72E-60 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS07960 cf05bc34d46adbf7141edc02d0dd1b74 237 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 236 4.2E-49 T 19-04-2016 APA12_RS11130 7e27ae524aa45b5c26ed8bd2182955c6 475 Gene3D G3DSA:3.30.43.10 7 106 1.0E-26 T 19-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 APA12_RS11130 7e27ae524aa45b5c26ed8bd2182955c6 475 PANTHER PTHR11748:SF35 12 468 1.2E-191 T 19-04-2016 APA12_RS11130 7e27ae524aa45b5c26ed8bd2182955c6 475 SUPERFAMILY SSF56176 13 226 1.36E-66 T 19-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APA12_RS11130 7e27ae524aa45b5c26ed8bd2182955c6 475 Gene3D G3DSA:3.30.465.10 108 226 1.6E-44 T 19-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APA12_RS11130 7e27ae524aa45b5c26ed8bd2182955c6 475 Pfam PF02913 FAD linked oxidases, C-terminal domain 226 466 8.3E-60 T 19-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 APA12_RS11130 7e27ae524aa45b5c26ed8bd2182955c6 475 PANTHER PTHR11748 12 468 1.2E-191 T 19-04-2016 APA12_RS11130 7e27ae524aa45b5c26ed8bd2182955c6 475 SUPERFAMILY SSF55103 230 469 1.49E-66 T 19-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 APA12_RS11130 7e27ae524aa45b5c26ed8bd2182955c6 475 Gene3D G3DSA:1.10.45.10 427 466 7.0E-13 T 19-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 APA12_RS11130 7e27ae524aa45b5c26ed8bd2182955c6 475 Pfam PF01565 FAD binding domain 52 189 1.8E-36 T 19-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 APA12_RS14785 906e196af157446cb8083cbf10848fc5 113 Gene3D G3DSA:1.20.272.10 1 113 1.3E-26 T 19-04-2016 APA12_RS14785 906e196af157446cb8083cbf10848fc5 113 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 1 113 7.1E-36 T 19-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 APA12_RS14785 906e196af157446cb8083cbf10848fc5 113 SUPERFAMILY SSF48019 2 113 4.42E-25 T 19-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 APA12_RS08540 b082b9a909a303da71561c4bcb1bdae3 331 Gene3D G3DSA:3.40.50.20 5 146 1.3E-49 T 19-04-2016 IPR016185 Pre-ATP-grasp domain APA12_RS08540 b082b9a909a303da71561c4bcb1bdae3 331 Gene3D G3DSA:3.30.1490.20 153 206 5.0E-27 T 19-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APA12_RS08540 b082b9a909a303da71561c4bcb1bdae3 331 PANTHER PTHR21621:SF4 1 329 6.3E-111 T 19-04-2016 APA12_RS08540 b082b9a909a303da71561c4bcb1bdae3 331 TIGRFAM TIGR01380 glut_syn: glutathione synthase 5 327 2.5E-119 T 19-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 APA12_RS08540 b082b9a909a303da71561c4bcb1bdae3 331 SUPERFAMILY SSF52440 5 137 2.79E-37 T 19-04-2016 IPR016185 Pre-ATP-grasp domain APA12_RS08540 b082b9a909a303da71561c4bcb1bdae3 331 Gene3D G3DSA:3.30.470.20 207 315 5.9E-45 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APA12_RS08540 b082b9a909a303da71561c4bcb1bdae3 331 SUPERFAMILY SSF56059 140 327 6.68E-57 T 19-04-2016 APA12_RS08540 b082b9a909a303da71561c4bcb1bdae3 331 PANTHER PTHR21621 1 329 6.3E-111 T 19-04-2016 APA12_RS08540 b082b9a909a303da71561c4bcb1bdae3 331 Hamap MF_00162 Glutathione synthetase [gshB]. 1 331 149.574 T 19-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 APA12_RS08540 b082b9a909a303da71561c4bcb1bdae3 331 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 140 311 1.7E-69 T 19-04-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 APA12_RS08540 b082b9a909a303da71561c4bcb1bdae3 331 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 5 136 7.5E-42 T 19-04-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 APA12_RS11775 61d2793ae487b11816d9c279b9cb1884 340 PANTHER PTHR30535 12 334 1.3E-48 T 19-04-2016 APA12_RS11775 61d2793ae487b11816d9c279b9cb1884 340 Gene3D G3DSA:3.40.50.1980 160 313 9.2E-27 T 19-04-2016 APA12_RS11775 61d2793ae487b11816d9c279b9cb1884 340 PANTHER PTHR30535:SF13 12 334 1.3E-48 T 19-04-2016 APA12_RS11775 61d2793ae487b11816d9c279b9cb1884 340 SUPERFAMILY SSF53807 32 338 5.1E-49 T 19-04-2016 APA12_RS11775 61d2793ae487b11816d9c279b9cb1884 340 Pfam PF01497 Periplasmic binding protein 57 254 3.9E-11 T 19-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 APA12_RS05980 12227cb5e68879198a5776de7d86661c 201 Pfam PF00313 'Cold-shock' DNA-binding domain 137 199 2.3E-23 T 19-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APA12_RS05980 12227cb5e68879198a5776de7d86661c 201 Pfam PF00313 'Cold-shock' DNA-binding domain 38 100 9.0E-13 T 19-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APA12_RS05980 12227cb5e68879198a5776de7d86661c 201 SUPERFAMILY SSF50249 133 199 1.31E-20 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS05980 12227cb5e68879198a5776de7d86661c 201 ProSitePatterns PS00352 'Cold-shock' domain signature. 149 168 - T 19-04-2016 IPR019844 Cold-shock conserved site APA12_RS05980 12227cb5e68879198a5776de7d86661c 201 Gene3D G3DSA:2.40.50.140 39 99 1.6E-17 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS05980 12227cb5e68879198a5776de7d86661c 201 Gene3D G3DSA:2.40.50.140 137 199 9.6E-26 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS05980 12227cb5e68879198a5776de7d86661c 201 SMART SM00357 137 201 2.4E-23 T 19-04-2016 IPR011129 Cold shock protein GO:0003676 APA12_RS05980 12227cb5e68879198a5776de7d86661c 201 SMART SM00357 37 101 8.7E-12 T 19-04-2016 IPR011129 Cold shock protein GO:0003676 APA12_RS05980 12227cb5e68879198a5776de7d86661c 201 PRINTS PR00050 Cold shock protein signature 174 192 2.4E-13 T 19-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APA12_RS05980 12227cb5e68879198a5776de7d86661c 201 PRINTS PR00050 Cold shock protein signature 138 153 2.4E-13 T 19-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APA12_RS05980 12227cb5e68879198a5776de7d86661c 201 PRINTS PR00050 Cold shock protein signature 159 168 2.4E-13 T 19-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APA12_RS05980 12227cb5e68879198a5776de7d86661c 201 PANTHER PTHR11544 40 200 1.8E-26 T 19-04-2016 APA12_RS05980 12227cb5e68879198a5776de7d86661c 201 SUPERFAMILY SSF50249 38 100 5.77E-15 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS05980 12227cb5e68879198a5776de7d86661c 201 PANTHER PTHR11544:SF43 40 200 1.8E-26 T 19-04-2016 APA12_RS05685 974fd614327eee24b60069abe0731e2a 246 Pfam PF13489 Methyltransferase domain 47 218 1.4E-19 T 19-04-2016 APA12_RS05685 974fd614327eee24b60069abe0731e2a 246 SUPERFAMILY SSF53335 18 245 1.67E-39 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS05685 974fd614327eee24b60069abe0731e2a 246 PANTHER PTHR10108:SF902 10 241 6.9E-62 T 19-04-2016 APA12_RS05685 974fd614327eee24b60069abe0731e2a 246 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 14 246 34.059 T 19-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 APA12_RS05685 974fd614327eee24b60069abe0731e2a 246 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 16 240 4.7E-65 T 19-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 APA12_RS05685 974fd614327eee24b60069abe0731e2a 246 PANTHER PTHR10108 10 241 6.9E-62 T 19-04-2016 APA12_RS05685 974fd614327eee24b60069abe0731e2a 246 Gene3D G3DSA:3.40.50.150 27 223 2.2E-41 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS08260 869f0589c52463a3b34175c59424aac7 480 PANTHER PTHR22773 1 475 3.7E-163 T 19-04-2016 APA12_RS08260 869f0589c52463a3b34175c59424aac7 480 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 470 17.849 T 19-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 APA12_RS08260 869f0589c52463a3b34175c59424aac7 480 PANTHER PTHR22773:SF41 1 475 3.7E-163 T 19-04-2016 APA12_RS08260 869f0589c52463a3b34175c59424aac7 480 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 9 437 9.0E-139 T 19-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 APA12_RS08260 869f0589c52463a3b34175c59424aac7 480 Pfam PF00361 Proton-conducting membrane transporter 124 416 1.3E-78 T 19-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 APA12_RS01130 6d62d2df9226a4f02061e5c3fc1c4eea 249 SUPERFAMILY SSF51730 6 235 1.96E-30 T 19-04-2016 IPR029041 FAD-linked oxidoreductase-like APA12_RS01130 6d62d2df9226a4f02061e5c3fc1c4eea 249 Gene3D G3DSA:3.20.20.220 6 210 2.9E-20 T 19-04-2016 IPR029041 FAD-linked oxidoreductase-like APA12_RS01130 6d62d2df9226a4f02061e5c3fc1c4eea 249 Pfam PF02219 Methylenetetrahydrofolate reductase 74 208 1.7E-4 T 19-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 APA12_RS07045 1bd1d39473b43b713526493f44273796 267 PANTHER PTHR31527:SF0 1 263 1.0E-35 T 19-04-2016 APA12_RS07045 1bd1d39473b43b713526493f44273796 267 TIGRFAM TIGR03425 urea_degr_2: urea carboxylase-associated protein 2 43 266 1.1E-81 T 19-04-2016 IPR017792 Urea carboxylase-associated protein 2 APA12_RS07045 1bd1d39473b43b713526493f44273796 267 PANTHER PTHR31527 1 263 1.0E-35 T 19-04-2016 APA12_RS07045 1bd1d39473b43b713526493f44273796 267 Pfam PF09347 Domain of unknown function (DUF1989) 47 211 4.5E-49 T 19-04-2016 IPR018959 Domain of unknown function DUF1989 APA12_RS01875 807776590e37fdc2519fb2062f82704d 364 Pfam PF06071 Protein of unknown function (DUF933) 280 363 2.6E-37 T 19-04-2016 IPR013029 Domain of unknown function DUF933 APA12_RS01875 807776590e37fdc2519fb2062f82704d 364 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 364 1.3E-150 T 19-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 APA12_RS01875 807776590e37fdc2519fb2062f82704d 364 Pfam PF01926 50S ribosome-binding GTPase 5 116 8.5E-24 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 APA12_RS01875 807776590e37fdc2519fb2062f82704d 364 PIRSF PIRSF006641 1 364 1.7E-154 T 19-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 APA12_RS01875 807776590e37fdc2519fb2062f82704d 364 Gene3D G3DSA:1.10.150.300 132 200 3.7E-23 T 19-04-2016 IPR023192 TGS-like domain APA12_RS01875 807776590e37fdc2519fb2062f82704d 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 3.0E-35 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 APA12_RS01875 807776590e37fdc2519fb2062f82704d 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 3.0E-35 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 APA12_RS01875 807776590e37fdc2519fb2062f82704d 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 71 86 3.0E-35 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 APA12_RS01875 807776590e37fdc2519fb2062f82704d 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 88 106 3.0E-35 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 APA12_RS01875 807776590e37fdc2519fb2062f82704d 364 PANTHER PTHR23305 1 364 2.6E-200 T 19-04-2016 APA12_RS01875 807776590e37fdc2519fb2062f82704d 364 SUPERFAMILY SSF81271 280 361 9.81E-34 T 19-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 APA12_RS01875 807776590e37fdc2519fb2062f82704d 364 Gene3D G3DSA:3.10.20.30 269 364 2.6E-46 T 19-04-2016 IPR012675 Beta-grasp domain APA12_RS01875 807776590e37fdc2519fb2062f82704d 364 Gene3D G3DSA:3.40.50.300 201 268 4.1E-45 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS01875 807776590e37fdc2519fb2062f82704d 364 Gene3D G3DSA:3.40.50.300 4 131 4.1E-45 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS01875 807776590e37fdc2519fb2062f82704d 364 SUPERFAMILY SSF52540 3 302 2.99E-80 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS01875 807776590e37fdc2519fb2062f82704d 364 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 364 43.638 T 19-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 APA12_RS01890 a7d6816b91072e70d8ebe7131df658cf 153 Pfam PF02410 Ribosomal silencing factor during starvation 44 138 1.1E-26 T 19-04-2016 APA12_RS01890 a7d6816b91072e70d8ebe7131df658cf 153 Gene3D G3DSA:3.30.460.10 39 140 8.1E-35 T 19-04-2016 APA12_RS01890 a7d6816b91072e70d8ebe7131df658cf 153 SUPERFAMILY SSF81301 40 140 1.36E-33 T 19-04-2016 APA12_RS01890 a7d6816b91072e70d8ebe7131df658cf 153 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 42 138 1.5E-32 T 19-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS APA12_RS01890 a7d6816b91072e70d8ebe7131df658cf 153 PANTHER PTHR21043 41 139 2.7E-35 T 19-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS APA12_RS01890 a7d6816b91072e70d8ebe7131df658cf 153 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 37 139 23.909 T 19-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS APA12_RS03140 c151dcc147c4899f9e0be511a91530d4 605 PRINTS PR00315 GTP-binding elongation factor signature 121 130 1.4E-15 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APA12_RS03140 c151dcc147c4899f9e0be511a91530d4 605 PRINTS PR00315 GTP-binding elongation factor signature 85 96 1.4E-15 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APA12_RS03140 c151dcc147c4899f9e0be511a91530d4 605 PRINTS PR00315 GTP-binding elongation factor signature 5 18 1.4E-15 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APA12_RS03140 c151dcc147c4899f9e0be511a91530d4 605 PRINTS PR00315 GTP-binding elongation factor signature 49 57 1.4E-15 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APA12_RS03140 c151dcc147c4899f9e0be511a91530d4 605 PRINTS PR00315 GTP-binding elongation factor signature 69 79 1.4E-15 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APA12_RS03140 c151dcc147c4899f9e0be511a91530d4 605 Pfam PF00009 Elongation factor Tu GTP binding domain 2 193 5.2E-55 T 19-04-2016 APA12_RS03140 c151dcc147c4899f9e0be511a91530d4 605 Gene3D G3DSA:2.40.30.10 203 301 1.2E-22 T 19-04-2016 APA12_RS03140 c151dcc147c4899f9e0be511a91530d4 605 SUPERFAMILY SSF50447 150 298 1.08E-27 T 19-04-2016 IPR009000 Translation protein, beta-barrel domain APA12_RS03140 c151dcc147c4899f9e0be511a91530d4 605 Pfam PF00679 Elongation factor G C-terminus 398 480 2.4E-21 T 19-04-2016 IPR000640 Translation elongation factor EFG, V domain APA12_RS03140 c151dcc147c4899f9e0be511a91530d4 605 Gene3D G3DSA:2.40.50.250 483 577 6.8E-42 T 19-04-2016 APA12_RS03140 c151dcc147c4899f9e0be511a91530d4 605 SUPERFAMILY SSF54980 399 513 1.49E-27 T 19-04-2016 IPR009022 Elongation factor G, III-V domain APA12_RS03140 c151dcc147c4899f9e0be511a91530d4 605 Gene3D G3DSA:3.30.70.240 401 481 2.6E-29 T 19-04-2016 IPR000640 Translation elongation factor EFG, V domain APA12_RS03140 c151dcc147c4899f9e0be511a91530d4 605 PANTHER PTHR23115 2 593 1.0E-269 T 19-04-2016 APA12_RS03140 c151dcc147c4899f9e0be511a91530d4 605 PANTHER PTHR23115:SF14 2 593 1.0E-269 T 19-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 APA12_RS03140 c151dcc147c4899f9e0be511a91530d4 605 Gene3D G3DSA:3.40.50.300 2 202 2.1E-63 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS03140 c151dcc147c4899f9e0be511a91530d4 605 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 3 599 2.7E-282 T 19-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 APA12_RS03140 c151dcc147c4899f9e0be511a91530d4 605 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 19-04-2016 IPR031157 Tr-type G domain, conserved site APA12_RS03140 c151dcc147c4899f9e0be511a91530d4 605 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 2 148 1.0E-24 T 19-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APA12_RS03140 c151dcc147c4899f9e0be511a91530d4 605 Gene3D G3DSA:3.30.70.870 302 400 5.6E-32 T 19-04-2016 APA12_RS03140 c151dcc147c4899f9e0be511a91530d4 605 Pfam PF03144 Elongation factor Tu domain 2 217 287 3.8E-10 T 19-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APA12_RS03140 c151dcc147c4899f9e0be511a91530d4 605 SUPERFAMILY SSF52540 2 205 3.16E-55 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS03140 c151dcc147c4899f9e0be511a91530d4 605 SUPERFAMILY SSF54980 302 386 2.34E-12 T 19-04-2016 IPR009022 Elongation factor G, III-V domain APA12_RS08235 7085f1b67f45d0cb3d23d5bbbb0a7f27 415 Pfam PF02687 FtsX-like permease family 275 408 5.2E-17 T 19-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APA12_RS08235 7085f1b67f45d0cb3d23d5bbbb0a7f27 415 Pfam PF12704 MacB-like periplasmic core domain 29 242 5.0E-16 T 19-04-2016 IPR025857 MacB-like periplasmic core domain APA12_RS08235 7085f1b67f45d0cb3d23d5bbbb0a7f27 415 PANTHER PTHR30489:SF8 1 415 1.8E-73 T 19-04-2016 APA12_RS08235 7085f1b67f45d0cb3d23d5bbbb0a7f27 415 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 415 1.2E-140 T 19-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 APA12_RS08235 7085f1b67f45d0cb3d23d5bbbb0a7f27 415 PANTHER PTHR30489 1 415 1.8E-73 T 19-04-2016 APA12_RS08845 6fecc1e7bed09454c74e6f26a15b776c 94 Gene3D G3DSA:2.30.30.100 6 77 9.3E-32 T 19-04-2016 APA12_RS08845 6fecc1e7bed09454c74e6f26a15b776c 94 PANTHER PTHR34772 3 86 1.5E-29 T 19-04-2016 APA12_RS08845 6fecc1e7bed09454c74e6f26a15b776c 94 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 2 67 26.189 T 19-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 APA12_RS08845 6fecc1e7bed09454c74e6f26a15b776c 94 PANTHER PTHR34772:SF1 3 86 1.5E-29 T 19-04-2016 APA12_RS08845 6fecc1e7bed09454c74e6f26a15b776c 94 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 8 67 9.5E-29 T 19-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 APA12_RS08845 6fecc1e7bed09454c74e6f26a15b776c 94 SUPERFAMILY SSF50182 8 70 2.81E-22 T 19-04-2016 IPR010920 LSM domain APA12_RS08170 66eacb5ed511a5543b52b605a7b2ee86 458 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 19 446 36.766 T 19-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 APA12_RS08170 66eacb5ed511a5543b52b605a7b2ee86 458 Gene3D G3DSA:2.160.10.10 256 327 2.8E-17 T 19-04-2016 APA12_RS08170 66eacb5ed511a5543b52b605a7b2ee86 458 SUPERFAMILY SSF53448 21 263 4.59E-57 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS08170 66eacb5ed511a5543b52b605a7b2ee86 458 Pfam PF12804 MobA-like NTP transferase domain 22 135 1.3E-21 T 19-04-2016 IPR025877 MobA-like NTP transferase APA12_RS08170 66eacb5ed511a5543b52b605a7b2ee86 458 PANTHER PTHR22572:SF115 21 443 1.8E-159 T 19-04-2016 APA12_RS08170 66eacb5ed511a5543b52b605a7b2ee86 458 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 22 444 2.9E-146 T 19-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 APA12_RS08170 66eacb5ed511a5543b52b605a7b2ee86 458 Gene3D G3DSA:2.160.10.10 328 440 4.7E-30 T 19-04-2016 APA12_RS08170 66eacb5ed511a5543b52b605a7b2ee86 458 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 397 425 - T 19-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APA12_RS08170 66eacb5ed511a5543b52b605a7b2ee86 458 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 389 423 2.3E-10 T 19-04-2016 IPR001451 Hexapeptide repeat APA12_RS08170 66eacb5ed511a5543b52b605a7b2ee86 458 Gene3D G3DSA:3.90.550.10 16 255 1.0E-60 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS08170 66eacb5ed511a5543b52b605a7b2ee86 458 PANTHER PTHR22572 21 443 1.8E-159 T 19-04-2016 APA12_RS08170 66eacb5ed511a5543b52b605a7b2ee86 458 SUPERFAMILY SSF51161 255 440 4.81E-50 T 19-04-2016 IPR011004 Trimeric LpxA-like APA12_RS08170 66eacb5ed511a5543b52b605a7b2ee86 458 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 312 345 1.4E-4 T 19-04-2016 IPR001451 Hexapeptide repeat APA12_RS08170 66eacb5ed511a5543b52b605a7b2ee86 458 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 276 310 7.9E-5 T 19-04-2016 IPR001451 Hexapeptide repeat APA12_RS08425 2fb3be1a18941c8b6138b23bca139304 496 PANTHER PTHR30508 3 496 0.0 T 19-04-2016 APA12_RS08425 2fb3be1a18941c8b6138b23bca139304 496 PANTHER PTHR30508:SF1 3 496 0.0 T 19-04-2016 APA12_RS08425 2fb3be1a18941c8b6138b23bca139304 496 Pfam PF01458 Uncharacterized protein family (UPF0051) 234 467 1.0E-67 T 19-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 APA12_RS08425 2fb3be1a18941c8b6138b23bca139304 496 SUPERFAMILY SSF101960 39 493 2.09E-137 T 19-04-2016 APA12_RS08425 2fb3be1a18941c8b6138b23bca139304 496 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 18 487 5.7E-191 T 19-04-2016 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 APA12_RS04750 c213273c176b26b08e0d7447b36d2b10 89 PRINTS PR00973 Ribosomal protein S17 family signature 54 64 5.4E-11 T 19-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04750 c213273c176b26b08e0d7447b36d2b10 89 PRINTS PR00973 Ribosomal protein S17 family signature 22 45 5.4E-11 T 19-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04750 c213273c176b26b08e0d7447b36d2b10 89 PRINTS PR00973 Ribosomal protein S17 family signature 64 71 5.4E-11 T 19-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04750 c213273c176b26b08e0d7447b36d2b10 89 Pfam PF00366 Ribosomal protein S17 8 74 3.7E-33 T 19-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04750 c213273c176b26b08e0d7447b36d2b10 89 SUPERFAMILY SSF50249 2 75 1.33E-32 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS04750 c213273c176b26b08e0d7447b36d2b10 89 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 1 79 24.177 T 19-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04750 c213273c176b26b08e0d7447b36d2b10 89 PANTHER PTHR10744 1 74 1.9E-36 T 19-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04750 c213273c176b26b08e0d7447b36d2b10 89 Gene3D G3DSA:2.40.50.140 1 75 2.1E-34 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS04750 c213273c176b26b08e0d7447b36d2b10 89 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 74 1.0E-32 T 19-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04750 c213273c176b26b08e0d7447b36d2b10 89 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 3 73 8.0E-36 T 19-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS00100 76997e6beddb3dbd3b4c0d9a0617de5b 484 Pfam PF02601 Exonuclease VII, large subunit 133 465 7.9E-90 T 19-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 APA12_RS00100 76997e6beddb3dbd3b4c0d9a0617de5b 484 PANTHER PTHR30008 393 483 6.8E-136 T 19-04-2016 APA12_RS00100 76997e6beddb3dbd3b4c0d9a0617de5b 484 PANTHER PTHR30008 9 373 6.8E-136 T 19-04-2016 APA12_RS00100 76997e6beddb3dbd3b4c0d9a0617de5b 484 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 18 466 1.1E-125 T 19-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 APA12_RS00100 76997e6beddb3dbd3b4c0d9a0617de5b 484 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 14 471 26.374 T 19-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 APA12_RS00100 76997e6beddb3dbd3b4c0d9a0617de5b 484 Pfam PF13742 OB-fold nucleic acid binding domain 17 110 1.6E-26 T 19-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 APA12_RS00100 76997e6beddb3dbd3b4c0d9a0617de5b 484 PANTHER PTHR30008:SF0 393 483 6.8E-136 T 19-04-2016 APA12_RS00100 76997e6beddb3dbd3b4c0d9a0617de5b 484 PANTHER PTHR30008:SF0 9 373 6.8E-136 T 19-04-2016 APA12_RS06075 1608766d0e6f6ecdb8f4f156c17bf54d 233 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 1 230 9.3E-91 T 19-04-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APA12_RS06075 1608766d0e6f6ecdb8f4f156c17bf54d 233 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 229 42.615 T 19-04-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APA12_RS06075 1608766d0e6f6ecdb8f4f156c17bf54d 233 PIRSF PIRSF001586 1 233 1.1E-83 T 19-04-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APA12_RS06075 1608766d0e6f6ecdb8f4f156c17bf54d 233 PANTHER PTHR10099 1 233 3.3E-104 T 19-04-2016 APA12_RS06075 1608766d0e6f6ecdb8f4f156c17bf54d 233 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 2 213 3.9E-46 T 19-04-2016 APA12_RS06075 1608766d0e6f6ecdb8f4f156c17bf54d 233 Gene3D G3DSA:3.40.50.880 1 231 4.3E-35 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like APA12_RS06075 1608766d0e6f6ecdb8f4f156c17bf54d 233 SUPERFAMILY SSF52317 1 230 1.24E-75 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like APA12_RS06075 1608766d0e6f6ecdb8f4f156c17bf54d 233 SMART SM01211 1 231 4.1E-130 T 19-04-2016 APA12_RS03810 4c1acd6c501598c3adc5dd89dfe46ad0 441 SUPERFAMILY SSF53098 138 378 1.06E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS03810 4c1acd6c501598c3adc5dd89dfe46ad0 441 Pfam PF13701 Transposase DDE domain group 1 2 438 5.4E-163 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS07195 4c1acd6c501598c3adc5dd89dfe46ad0 441 SUPERFAMILY SSF53098 138 378 1.06E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS07195 4c1acd6c501598c3adc5dd89dfe46ad0 441 Pfam PF13701 Transposase DDE domain group 1 2 438 5.4E-163 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS11875 4c1acd6c501598c3adc5dd89dfe46ad0 441 SUPERFAMILY SSF53098 138 378 1.06E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS11875 4c1acd6c501598c3adc5dd89dfe46ad0 441 Pfam PF13701 Transposase DDE domain group 1 2 438 5.4E-163 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS09210 4c1acd6c501598c3adc5dd89dfe46ad0 441 SUPERFAMILY SSF53098 138 378 1.06E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS09210 4c1acd6c501598c3adc5dd89dfe46ad0 441 Pfam PF13701 Transposase DDE domain group 1 2 438 5.4E-163 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS09130 4c1acd6c501598c3adc5dd89dfe46ad0 441 SUPERFAMILY SSF53098 138 378 1.06E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS09130 4c1acd6c501598c3adc5dd89dfe46ad0 441 Pfam PF13701 Transposase DDE domain group 1 2 438 5.4E-163 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS01350 4c1acd6c501598c3adc5dd89dfe46ad0 441 SUPERFAMILY SSF53098 138 378 1.06E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS01350 4c1acd6c501598c3adc5dd89dfe46ad0 441 Pfam PF13701 Transposase DDE domain group 1 2 438 5.4E-163 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS01715 4c1acd6c501598c3adc5dd89dfe46ad0 441 SUPERFAMILY SSF53098 138 378 1.06E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS01715 4c1acd6c501598c3adc5dd89dfe46ad0 441 Pfam PF13701 Transposase DDE domain group 1 2 438 5.4E-163 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS06955 4c1acd6c501598c3adc5dd89dfe46ad0 441 SUPERFAMILY SSF53098 138 378 1.06E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS06955 4c1acd6c501598c3adc5dd89dfe46ad0 441 Pfam PF13701 Transposase DDE domain group 1 2 438 5.4E-163 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS07210 4c1acd6c501598c3adc5dd89dfe46ad0 441 SUPERFAMILY SSF53098 138 378 1.06E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS07210 4c1acd6c501598c3adc5dd89dfe46ad0 441 Pfam PF13701 Transposase DDE domain group 1 2 438 5.4E-163 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS07940 4c1acd6c501598c3adc5dd89dfe46ad0 441 SUPERFAMILY SSF53098 138 378 1.06E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS07940 4c1acd6c501598c3adc5dd89dfe46ad0 441 Pfam PF13701 Transposase DDE domain group 1 2 438 5.4E-163 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS04130 4c1acd6c501598c3adc5dd89dfe46ad0 441 SUPERFAMILY SSF53098 138 378 1.06E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS04130 4c1acd6c501598c3adc5dd89dfe46ad0 441 Pfam PF13701 Transposase DDE domain group 1 2 438 5.4E-163 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS10405 3559336a2c0dfbff49e81d046d7ce2fb 358 Pfam PF10005 zinc-ribbon domain 4 99 2.1E-23 T 19-04-2016 IPR011201 Zinc-ribbon domain, bacteria APA12_RS10405 3559336a2c0dfbff49e81d046d7ce2fb 358 Pfam PF15887 Putative zinc-binding metallo-peptidase 103 349 2.6E-107 T 19-04-2016 IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase APA12_RS10405 3559336a2c0dfbff49e81d046d7ce2fb 358 PIRSF PIRSF012641 1 358 7.6E-141 T 19-04-2016 IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase APA12_RS00195 79536146cd50a0ef2eb1d81e8155179f 643 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 56 238 4.5E-30 T 19-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APA12_RS00195 79536146cd50a0ef2eb1d81e8155179f 643 Gene3D G3DSA:3.40.50.920 494 617 1.4E-35 T 19-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APA12_RS00195 79536146cd50a0ef2eb1d81e8155179f 643 Gene3D G3DSA:3.40.50.970 40 238 7.0E-35 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS00195 79536146cd50a0ef2eb1d81e8155179f 643 PANTHER PTHR11624:SF1 302 629 5.5E-107 T 19-04-2016 APA12_RS00195 79536146cd50a0ef2eb1d81e8155179f 643 PANTHER PTHR11624:SF1 55 280 5.5E-107 T 19-04-2016 APA12_RS00195 79536146cd50a0ef2eb1d81e8155179f 643 SUPERFAMILY SSF52518 38 246 3.3E-35 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS00195 79536146cd50a0ef2eb1d81e8155179f 643 SMART SM00861 320 481 2.4E-22 T 19-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APA12_RS00195 79536146cd50a0ef2eb1d81e8155179f 643 PANTHER PTHR11624 302 629 5.5E-107 T 19-04-2016 IPR033247 Transketolase family APA12_RS00195 79536146cd50a0ef2eb1d81e8155179f 643 PANTHER PTHR11624 55 280 5.5E-107 T 19-04-2016 IPR033247 Transketolase family APA12_RS00195 79536146cd50a0ef2eb1d81e8155179f 643 Pfam PF02779 Transketolase, pyrimidine binding domain 362 475 4.3E-21 T 19-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APA12_RS00195 79536146cd50a0ef2eb1d81e8155179f 643 SUPERFAMILY SSF52922 492 618 1.57E-36 T 19-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APA12_RS00195 79536146cd50a0ef2eb1d81e8155179f 643 SUPERFAMILY SSF52518 315 476 2.54E-33 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS00195 79536146cd50a0ef2eb1d81e8155179f 643 Gene3D G3DSA:3.40.50.970 295 475 6.9E-39 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS05250 97f2a045d08d8ad9520e9517c1edb341 515 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 7 508 47.999 T 19-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 APA12_RS05250 97f2a045d08d8ad9520e9517c1edb341 515 SUPERFAMILY SSF54980 375 446 2.12E-14 T 19-04-2016 IPR009022 Elongation factor G, III-V domain APA12_RS05250 97f2a045d08d8ad9520e9517c1edb341 515 PRINTS PR00315 GTP-binding elongation factor signature 88 98 1.1E-11 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APA12_RS05250 97f2a045d08d8ad9520e9517c1edb341 515 PRINTS PR00315 GTP-binding elongation factor signature 18 31 1.1E-11 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APA12_RS05250 97f2a045d08d8ad9520e9517c1edb341 515 PRINTS PR00315 GTP-binding elongation factor signature 104 115 1.1E-11 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APA12_RS05250 97f2a045d08d8ad9520e9517c1edb341 515 PRINTS PR00315 GTP-binding elongation factor signature 68 76 1.1E-11 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APA12_RS05250 97f2a045d08d8ad9520e9517c1edb341 515 PRINTS PR00315 GTP-binding elongation factor signature 140 149 1.1E-11 T 19-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APA12_RS05250 97f2a045d08d8ad9520e9517c1edb341 515 Pfam PF16658 Class II release factor RF3, C-terminal domain 369 495 4.6E-43 T 19-04-2016 IPR032090 Peptide chain release factor 3, C-terminal APA12_RS05250 97f2a045d08d8ad9520e9517c1edb341 515 Pfam PF03144 Elongation factor Tu domain 2 296 362 5.6E-8 T 19-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APA12_RS05250 97f2a045d08d8ad9520e9517c1edb341 515 SUPERFAMILY SSF50447 244 375 9.34E-28 T 19-04-2016 IPR009000 Translation protein, beta-barrel domain APA12_RS05250 97f2a045d08d8ad9520e9517c1edb341 515 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 19 151 1.9E-22 T 19-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APA12_RS05250 97f2a045d08d8ad9520e9517c1edb341 515 SUPERFAMILY SSF52540 12 259 4.23E-80 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05250 97f2a045d08d8ad9520e9517c1edb341 515 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 61 76 - T 19-04-2016 IPR031157 Tr-type G domain, conserved site APA12_RS05250 97f2a045d08d8ad9520e9517c1edb341 515 PANTHER PTHR23115:SF69 233 448 8.6E-209 T 19-04-2016 APA12_RS05250 97f2a045d08d8ad9520e9517c1edb341 515 PANTHER PTHR23115:SF69 1 187 8.6E-209 T 19-04-2016 APA12_RS05250 97f2a045d08d8ad9520e9517c1edb341 515 PANTHER PTHR23115 233 448 8.6E-209 T 19-04-2016 APA12_RS05250 97f2a045d08d8ad9520e9517c1edb341 515 PANTHER PTHR23115 1 187 8.6E-209 T 19-04-2016 APA12_RS05250 97f2a045d08d8ad9520e9517c1edb341 515 Gene3D G3DSA:3.30.70.870 377 444 8.7E-12 T 19-04-2016 APA12_RS05250 97f2a045d08d8ad9520e9517c1edb341 515 Gene3D G3DSA:2.40.30.10 276 376 2.7E-23 T 19-04-2016 APA12_RS05250 97f2a045d08d8ad9520e9517c1edb341 515 Gene3D G3DSA:3.40.50.300 11 196 7.9E-56 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05250 97f2a045d08d8ad9520e9517c1edb341 515 Gene3D G3DSA:3.40.50.300 201 264 1.1E-4 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05250 97f2a045d08d8ad9520e9517c1edb341 515 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 126 149 2.8E-10 T 19-04-2016 APA12_RS05250 97f2a045d08d8ad9520e9517c1edb341 515 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 233 255 2.8E-10 T 19-04-2016 APA12_RS05250 97f2a045d08d8ad9520e9517c1edb341 515 Pfam PF00009 Elongation factor Tu GTP binding domain 16 257 2.6E-48 T 19-04-2016 APA12_RS09750 05aae295545363f6e6cf2ec465da8021 434 Gene3D G3DSA:3.40.50.1000 257 313 4.7E-4 T 19-04-2016 IPR023214 HAD-like domain APA12_RS09750 05aae295545363f6e6cf2ec465da8021 434 Gene3D G3DSA:3.40.50.1000 78 95 4.7E-4 T 19-04-2016 IPR023214 HAD-like domain APA12_RS09750 05aae295545363f6e6cf2ec465da8021 434 SUPERFAMILY SSF56784 256 343 1.65E-8 T 19-04-2016 IPR023214 HAD-like domain APA12_RS01670 d4e28b4aa475a98ad5eb1d789ed59ce8 306 PANTHER PTHR32338 1 304 6.0E-112 T 19-04-2016 APA12_RS01670 d4e28b4aa475a98ad5eb1d789ed59ce8 306 PANTHER PTHR32338:SF9 1 304 6.0E-112 T 19-04-2016 APA12_RS01670 d4e28b4aa475a98ad5eb1d789ed59ce8 306 SMART SM00859 6 109 3.2E-14 T 19-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 APA12_RS01670 d4e28b4aa475a98ad5eb1d789ed59ce8 306 SUPERFAMILY SSF51735 7 138 1.45E-26 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS01670 d4e28b4aa475a98ad5eb1d789ed59ce8 306 TIGRFAM TIGR01851 argC_other: N-acetyl-gamma-glutamyl-phosphate reductase 4 303 8.5E-114 T 19-04-2016 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APA12_RS01670 d4e28b4aa475a98ad5eb1d789ed59ce8 306 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 115 131 - T 19-04-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APA12_RS01670 d4e28b4aa475a98ad5eb1d789ed59ce8 306 SUPERFAMILY SSF55347 120 284 2.88E-39 T 19-04-2016 APA12_RS01670 d4e28b4aa475a98ad5eb1d789ed59ce8 306 Hamap MF_01110 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 3 303 49.226 T 19-04-2016 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APA12_RS01670 d4e28b4aa475a98ad5eb1d789ed59ce8 306 Gene3D G3DSA:3.40.50.720 42 128 2.1E-16 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS01670 d4e28b4aa475a98ad5eb1d789ed59ce8 306 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 41 105 2.1E-8 T 19-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 APA12_RS01670 d4e28b4aa475a98ad5eb1d789ed59ce8 306 Gene3D G3DSA:3.30.360.10 129 284 1.5E-42 T 19-04-2016 APA12_RS10510 961ff53562cdb0133f622de5ca41e402 303 PANTHER PTHR22911 2 292 4.2E-44 T 19-04-2016 APA12_RS10510 961ff53562cdb0133f622de5ca41e402 303 Pfam PF00892 EamA-like transporter family 153 280 4.8E-8 T 19-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APA12_RS10510 961ff53562cdb0133f622de5ca41e402 303 Pfam PF00892 EamA-like transporter family 7 137 8.7E-11 T 19-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APA12_RS10510 961ff53562cdb0133f622de5ca41e402 303 SUPERFAMILY SSF103481 187 288 6.41E-12 T 19-04-2016 APA12_RS10510 961ff53562cdb0133f622de5ca41e402 303 SUPERFAMILY SSF103481 41 140 3.92E-14 T 19-04-2016 APA12_RS12550 50c94a8498acebe98fa66735503d275e 530 SUPERFAMILY SSF53474 88 518 8.11E-62 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS12550 50c94a8498acebe98fa66735503d275e 530 Gene3D G3DSA:3.40.50.1820 79 494 1.5E-49 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS12550 50c94a8498acebe98fa66735503d275e 530 ProSitePatterns PS00131 Serine carboxypeptidases, serine active site. 235 242 - T 19-04-2016 IPR018202 Serine carboxypeptidase, serine active site APA12_RS12550 50c94a8498acebe98fa66735503d275e 530 Pfam PF00450 Serine carboxypeptidase 93 491 7.4E-20 T 19-04-2016 IPR001563 Peptidase S10, serine carboxypeptidase GO:0004185|GO:0006508 APA12_RS05950 c484ca7c11c36dc7ea78533a11a5d4f4 419 SUPERFAMILY SSF53335 237 260 1.84E-29 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS05950 c484ca7c11c36dc7ea78533a11a5d4f4 419 SUPERFAMILY SSF53335 58 189 1.84E-29 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS05950 c484ca7c11c36dc7ea78533a11a5d4f4 419 Gene3D G3DSA:3.40.50.150 242 313 5.3E-28 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS05950 c484ca7c11c36dc7ea78533a11a5d4f4 419 Gene3D G3DSA:3.40.50.150 59 198 5.3E-28 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS05950 c484ca7c11c36dc7ea78533a11a5d4f4 419 PANTHER PTHR10108 207 259 2.5E-17 T 19-04-2016 APA12_RS05950 c484ca7c11c36dc7ea78533a11a5d4f4 419 PANTHER PTHR10108 60 177 2.5E-17 T 19-04-2016 APA12_RS05950 c484ca7c11c36dc7ea78533a11a5d4f4 419 Pfam PF13847 Methyltransferase domain 64 165 5.7E-18 T 19-04-2016 IPR025714 Methyltransferase domain APA12_RS10740 1be78a4f46de3d45fd5b42a0990ddc46 240 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 20 98 5.9E-20 T 19-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 APA12_RS10740 1be78a4f46de3d45fd5b42a0990ddc46 240 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 19 235 14.334 T 19-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 APA12_RS10740 1be78a4f46de3d45fd5b42a0990ddc46 240 PANTHER PTHR33162 19 103 2.5E-15 T 19-04-2016 APA12_RS10740 1be78a4f46de3d45fd5b42a0990ddc46 240 PANTHER PTHR33162:SF1 19 103 2.5E-15 T 19-04-2016 APA12_RS10740 1be78a4f46de3d45fd5b42a0990ddc46 240 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 58 76 1.5E-11 T 19-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 APA12_RS10740 1be78a4f46de3d45fd5b42a0990ddc46 240 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 19 39 1.5E-11 T 19-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 APA12_RS10740 1be78a4f46de3d45fd5b42a0990ddc46 240 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 39 58 1.5E-11 T 19-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 APA12_RS14155 ebbb9981144e6ab10c19684904512eff 551 Gene3D G3DSA:3.40.50.300 449 550 9.5E-16 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS14155 ebbb9981144e6ab10c19684904512eff 551 Gene3D G3DSA:3.40.50.300 278 402 5.7E-8 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS14155 ebbb9981144e6ab10c19684904512eff 551 SMART SM00490 456 545 4.5E-18 T 19-04-2016 IPR001650 Helicase, C-terminal APA12_RS14155 ebbb9981144e6ab10c19684904512eff 551 PANTHER PTHR12131 277 545 8.1E-119 T 19-04-2016 APA12_RS14155 ebbb9981144e6ab10c19684904512eff 551 SUPERFAMILY SSF52540 281 550 1.61E-31 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS14155 ebbb9981144e6ab10c19684904512eff 551 Pfam PF00271 Helicase conserved C-terminal domain 444 545 3.0E-12 T 19-04-2016 IPR001650 Helicase, C-terminal APA12_RS01805 ac001ff562abe18eed2500d14995f06f 520 PANTHER PTHR16943:SF19 1 493 8.9E-123 T 19-04-2016 APA12_RS01805 ac001ff562abe18eed2500d14995f06f 520 SUPERFAMILY SSF103378 18 478 4.58E-120 T 19-04-2016 IPR005656 MmgE/PrpD GO:0016829 APA12_RS01805 ac001ff562abe18eed2500d14995f06f 520 Pfam PF03972 MmgE/PrpD family 19 473 5.4E-126 T 19-04-2016 IPR005656 MmgE/PrpD GO:0016829 APA12_RS01805 ac001ff562abe18eed2500d14995f06f 520 PANTHER PTHR16943 1 493 8.9E-123 T 19-04-2016 IPR005656 MmgE/PrpD GO:0016829 APA12_RS01805 ac001ff562abe18eed2500d14995f06f 520 Gene3D G3DSA:3.30.1330.120 284 427 2.9E-45 T 19-04-2016 APA12_RS10565 7f79bd136ea5970aa6cc57e324890658 281 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 19-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APA12_RS10565 7f79bd136ea5970aa6cc57e324890658 281 SUPERFAMILY SSF51735 4 208 4.38E-50 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS10565 7f79bd136ea5970aa6cc57e324890658 281 Pfam PF00106 short chain dehydrogenase 4 186 8.2E-41 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS10565 7f79bd136ea5970aa6cc57e324890658 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 1.9E-22 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS10565 7f79bd136ea5970aa6cc57e324890658 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 1.9E-22 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS10565 7f79bd136ea5970aa6cc57e324890658 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 1.9E-22 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS10565 7f79bd136ea5970aa6cc57e324890658 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 1.9E-22 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS10565 7f79bd136ea5970aa6cc57e324890658 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.9E-22 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS10565 7f79bd136ea5970aa6cc57e324890658 281 PANTHER PTHR24322 145 177 1.3E-42 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS10565 7f79bd136ea5970aa6cc57e324890658 281 PANTHER PTHR24322 7 129 1.3E-42 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS10565 7f79bd136ea5970aa6cc57e324890658 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 2.4E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS10565 7f79bd136ea5970aa6cc57e324890658 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 2.4E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS10565 7f79bd136ea5970aa6cc57e324890658 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 2.4E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS10565 7f79bd136ea5970aa6cc57e324890658 281 Gene3D G3DSA:3.40.50.720 4 201 2.4E-53 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS00050 e1d80675571a41fbd361fa46f4e01404 319 Pfam PF00085 Thioredoxin 30 133 2.7E-20 T 19-04-2016 IPR013766 Thioredoxin domain GO:0045454 APA12_RS00050 e1d80675571a41fbd361fa46f4e01404 319 Gene3D G3DSA:3.40.30.10 20 137 8.0E-27 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS00050 e1d80675571a41fbd361fa46f4e01404 319 SUPERFAMILY SSF52833 21 139 8.96E-29 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS00050 e1d80675571a41fbd361fa46f4e01404 319 Pfam PF14559 Tetratricopeptide repeat 157 223 8.4E-10 T 19-04-2016 APA12_RS00050 e1d80675571a41fbd361fa46f4e01404 319 PANTHER PTHR10438:SF282 30 138 2.7E-29 T 19-04-2016 APA12_RS00050 e1d80675571a41fbd361fa46f4e01404 319 PANTHER PTHR10438:SF282 260 281 2.7E-29 T 19-04-2016 APA12_RS00050 e1d80675571a41fbd361fa46f4e01404 319 SUPERFAMILY SSF48452 230 305 7.59E-9 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS00050 e1d80675571a41fbd361fa46f4e01404 319 SUPERFAMILY SSF48452 153 203 7.59E-9 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS00050 e1d80675571a41fbd361fa46f4e01404 319 Pfam PF14561 Tetratricopeptide repeat 231 318 1.2E-30 T 19-04-2016 APA12_RS00050 e1d80675571a41fbd361fa46f4e01404 319 ProSitePatterns PS00194 Thioredoxin family active site. 48 66 - T 19-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 APA12_RS00050 e1d80675571a41fbd361fa46f4e01404 319 Gene3D G3DSA:1.25.40.10 147 228 4.0E-8 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS00050 e1d80675571a41fbd361fa46f4e01404 319 Gene3D G3DSA:1.25.40.10 233 318 1.4E-30 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS00050 e1d80675571a41fbd361fa46f4e01404 319 PANTHER PTHR10438 30 138 2.7E-29 T 19-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APA12_RS00050 e1d80675571a41fbd361fa46f4e01404 319 PANTHER PTHR10438 260 281 2.7E-29 T 19-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APA12_RS10760 8c39c9921b6b7a0d25164aaac3117df7 599 PANTHER PTHR11956:SF6 334 598 1.8E-180 T 19-04-2016 APA12_RS10760 8c39c9921b6b7a0d25164aaac3117df7 599 PANTHER PTHR11956:SF6 5 318 1.8E-180 T 19-04-2016 APA12_RS10760 8c39c9921b6b7a0d25164aaac3117df7 599 Gene3D G3DSA:1.10.730.10 473 598 7.5E-37 T 19-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS10760 8c39c9921b6b7a0d25164aaac3117df7 599 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 11 93 3.1E-19 T 19-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APA12_RS10760 8c39c9921b6b7a0d25164aaac3117df7 599 Pfam PF00750 tRNA synthetases class I (R) 103 178 6.2E-10 T 19-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APA12_RS10760 8c39c9921b6b7a0d25164aaac3117df7 599 SMART SM00836 467 598 8.8E-54 T 19-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 APA12_RS10760 8c39c9921b6b7a0d25164aaac3117df7 599 Gene3D G3DSA:3.30.1360.70 10 112 7.0E-25 T 19-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APA12_RS10760 8c39c9921b6b7a0d25164aaac3117df7 599 SUPERFAMILY SSF55190 7 113 2.22E-20 T 19-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APA12_RS10760 8c39c9921b6b7a0d25164aaac3117df7 599 SMART SM01016 7 93 1.5E-29 T 19-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APA12_RS10760 8c39c9921b6b7a0d25164aaac3117df7 599 Hamap MF_00123 Arginine--tRNA ligase [argS]. 7 598 24.147 T 19-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APA12_RS10760 8c39c9921b6b7a0d25164aaac3117df7 599 Pfam PF05746 DALR anticodon binding domain 467 598 9.3E-32 T 19-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 APA12_RS10760 8c39c9921b6b7a0d25164aaac3117df7 599 SUPERFAMILY SSF47323 461 598 5.75E-33 T 19-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS10760 8c39c9921b6b7a0d25164aaac3117df7 599 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 132 141 - T 19-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS10760 8c39c9921b6b7a0d25164aaac3117df7 599 SUPERFAMILY SSF52374 118 478 1.31E-78 T 19-04-2016 APA12_RS10760 8c39c9921b6b7a0d25164aaac3117df7 599 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 371 450 1.2E-5 T 19-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS10760 8c39c9921b6b7a0d25164aaac3117df7 599 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 26 598 2.5E-113 T 19-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APA12_RS10760 8c39c9921b6b7a0d25164aaac3117df7 599 PRINTS PR01038 Arginyl-tRNA synthetase signature 137 153 5.7E-23 T 19-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APA12_RS10760 8c39c9921b6b7a0d25164aaac3117df7 599 PRINTS PR01038 Arginyl-tRNA synthetase signature 161 174 5.7E-23 T 19-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APA12_RS10760 8c39c9921b6b7a0d25164aaac3117df7 599 PRINTS PR01038 Arginyl-tRNA synthetase signature 122 137 5.7E-23 T 19-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APA12_RS10760 8c39c9921b6b7a0d25164aaac3117df7 599 PRINTS PR01038 Arginyl-tRNA synthetase signature 336 357 5.7E-23 T 19-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APA12_RS10760 8c39c9921b6b7a0d25164aaac3117df7 599 PANTHER PTHR11956 334 598 1.8E-180 T 19-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APA12_RS10760 8c39c9921b6b7a0d25164aaac3117df7 599 PANTHER PTHR11956 5 318 1.8E-180 T 19-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APA12_RS10760 8c39c9921b6b7a0d25164aaac3117df7 599 Gene3D G3DSA:3.40.50.620 116 472 1.1E-91 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS04340 9cf374610197dabae6effd5273cfca9d 272 PIRSF PIRSF000388 2 269 1.7E-96 T 19-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 APA12_RS04340 9cf374610197dabae6effd5273cfca9d 272 SUPERFAMILY SSF51621 18 263 3.18E-93 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APA12_RS04340 9cf374610197dabae6effd5273cfca9d 272 PANTHER PTHR20881 21 270 2.5E-118 T 19-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 APA12_RS04340 9cf374610197dabae6effd5273cfca9d 272 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 20 262 5.9E-85 T 19-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 APA12_RS04340 9cf374610197dabae6effd5273cfca9d 272 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 10 266 38.183 T 19-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 APA12_RS04340 9cf374610197dabae6effd5273cfca9d 272 Gene3D G3DSA:3.20.20.60 13 265 4.7E-102 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APA12_RS04340 9cf374610197dabae6effd5273cfca9d 272 Pfam PF02548 Ketopantoate hydroxymethyltransferase 18 261 3.1E-100 T 19-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 APA12_RS03965 785d941e901306a7558c26c2c1a67bea 596 Gene3D G3DSA:3.40.50.1970 229 398 6.4E-64 T 19-04-2016 APA12_RS03965 785d941e901306a7558c26c2c1a67bea 596 SUPERFAMILY SSF52540 56 220 1.41E-28 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS03965 785d941e901306a7558c26c2c1a67bea 596 Pfam PF01761 3-dehydroquinate synthase 294 558 1.6E-95 T 19-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 APA12_RS03965 785d941e901306a7558c26c2c1a67bea 596 Pfam PF01202 Shikimate kinase 65 220 3.0E-44 T 19-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 APA12_RS03965 785d941e901306a7558c26c2c1a67bea 596 ProSitePatterns PS01128 Shikimate kinase signature. 112 137 - T 19-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 APA12_RS03965 785d941e901306a7558c26c2c1a67bea 596 PRINTS PR01100 Shikimate kinase family signature 83 96 1.5E-18 T 19-04-2016 APA12_RS03965 785d941e901306a7558c26c2c1a67bea 596 PRINTS PR01100 Shikimate kinase family signature 111 119 1.5E-18 T 19-04-2016 APA12_RS03965 785d941e901306a7558c26c2c1a67bea 596 PRINTS PR01100 Shikimate kinase family signature 150 167 1.5E-18 T 19-04-2016 APA12_RS03965 785d941e901306a7558c26c2c1a67bea 596 PRINTS PR01100 Shikimate kinase family signature 59 74 1.5E-18 T 19-04-2016 APA12_RS03965 785d941e901306a7558c26c2c1a67bea 596 PRINTS PR01100 Shikimate kinase family signature 129 138 1.5E-18 T 19-04-2016 APA12_RS03965 785d941e901306a7558c26c2c1a67bea 596 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 227 591 40.363 T 19-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 APA12_RS03965 785d941e901306a7558c26c2c1a67bea 596 Gene3D G3DSA:1.20.1090.10 399 590 1.4E-61 T 19-04-2016 APA12_RS03965 785d941e901306a7558c26c2c1a67bea 596 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 238 588 6.9E-110 T 19-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 APA12_RS03965 785d941e901306a7558c26c2c1a67bea 596 SUPERFAMILY SSF56796 229 590 1.18E-108 T 19-04-2016 APA12_RS03965 785d941e901306a7558c26c2c1a67bea 596 PANTHER PTHR21090 219 592 1.4E-152 T 19-04-2016 APA12_RS03965 785d941e901306a7558c26c2c1a67bea 596 Gene3D G3DSA:3.40.50.300 57 221 4.0E-49 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS03965 785d941e901306a7558c26c2c1a67bea 596 Hamap MF_00109 Shikimate kinase [aroK]. 56 221 27.807 T 19-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 APA12_RS09665 0c680553de618f5ae40b02a1b2097732 478 Gene3D G3DSA:3.90.640.10 285 349 1.3E-20 T 19-04-2016 APA12_RS09665 0c680553de618f5ae40b02a1b2097732 478 PIRSF PIRSF003101 51 478 6.6E-134 T 19-04-2016 IPR020823 Cell division protein FtsA GO:0007049 APA12_RS09665 0c680553de618f5ae40b02a1b2097732 478 Gene3D G3DSA:3.30.420.40 50 141 6.0E-14 T 19-04-2016 APA12_RS09665 0c680553de618f5ae40b02a1b2097732 478 Gene3D G3DSA:3.30.420.40 218 259 6.0E-14 T 19-04-2016 APA12_RS09665 0c680553de618f5ae40b02a1b2097732 478 PANTHER PTHR32432:SF4 48 407 1.7E-97 T 19-04-2016 APA12_RS09665 0c680553de618f5ae40b02a1b2097732 478 PANTHER PTHR32432 48 407 1.7E-97 T 19-04-2016 APA12_RS09665 0c680553de618f5ae40b02a1b2097732 478 Gene3D G3DSA:3.30.1490.110 151 217 3.2E-11 T 19-04-2016 APA12_RS09665 0c680553de618f5ae40b02a1b2097732 478 SMART SM00842 60 246 2.4E-75 T 19-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 APA12_RS09665 0c680553de618f5ae40b02a1b2097732 478 Hamap MF_02033 Cell division protein FtsA [ftsA]. 56 478 24.684 T 19-04-2016 IPR020823 Cell division protein FtsA GO:0007049 APA12_RS09665 0c680553de618f5ae40b02a1b2097732 478 Gene3D G3DSA:3.30.420.40 350 402 9.5E-23 T 19-04-2016 APA12_RS09665 0c680553de618f5ae40b02a1b2097732 478 Gene3D G3DSA:3.30.420.40 260 284 9.5E-23 T 19-04-2016 APA12_RS09665 0c680553de618f5ae40b02a1b2097732 478 Pfam PF14450 Cell division protein FtsA 258 440 3.7E-21 T 19-04-2016 APA12_RS09665 0c680553de618f5ae40b02a1b2097732 478 Pfam PF14450 Cell division protein FtsA 61 235 1.3E-9 T 19-04-2016 APA12_RS09665 0c680553de618f5ae40b02a1b2097732 478 SUPERFAMILY SSF53067 250 412 2.16E-35 T 19-04-2016 APA12_RS09665 0c680553de618f5ae40b02a1b2097732 478 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 61 443 2.5E-91 T 19-04-2016 IPR020823 Cell division protein FtsA GO:0007049 APA12_RS09665 0c680553de618f5ae40b02a1b2097732 478 SUPERFAMILY SSF53067 59 247 5.18E-43 T 19-04-2016 APA12_RS09665 0c680553de618f5ae40b02a1b2097732 478 Pfam PF02491 SHS2 domain inserted in FTSA 137 211 1.2E-17 T 19-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 APA12_RS04440 2d3491a5a37a86dbd96467d590d13632 360 Gene3D G3DSA:3.90.650.10 178 342 1.9E-62 T 19-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APA12_RS04440 2d3491a5a37a86dbd96467d590d13632 360 SUPERFAMILY SSF56042 177 340 2.39E-56 T 19-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APA12_RS04440 2d3491a5a37a86dbd96467d590d13632 360 PANTHER PTHR10520 12 338 2.8E-197 T 19-04-2016 APA12_RS04440 2d3491a5a37a86dbd96467d590d13632 360 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 12 349 43.32 T 19-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APA12_RS04440 2d3491a5a37a86dbd96467d590d13632 360 SUPERFAMILY SSF55326 12 175 3.29E-48 T 19-04-2016 APA12_RS04440 2d3491a5a37a86dbd96467d590d13632 360 Pfam PF00586 AIR synthase related protein, N-terminal domain 66 162 3.6E-15 T 19-04-2016 IPR016188 PurM-like, N-terminal domain APA12_RS04440 2d3491a5a37a86dbd96467d590d13632 360 Gene3D G3DSA:3.30.1330.10 27 175 6.5E-60 T 19-04-2016 IPR016188 PurM-like, N-terminal domain APA12_RS04440 2d3491a5a37a86dbd96467d590d13632 360 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 12 339 9.3E-128 T 19-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APA12_RS04440 2d3491a5a37a86dbd96467d590d13632 360 Pfam PF02769 AIR synthase related protein, C-terminal domain 182 342 3.0E-35 T 19-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APA12_RS08305 86226857e6642a73cc96ff91a22182f8 426 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 79 90 - T 19-04-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 APA12_RS08305 86226857e6642a73cc96ff91a22182f8 426 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 44 426 1.7E-174 T 19-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 APA12_RS08305 86226857e6642a73cc96ff91a22182f8 426 PANTHER PTHR11993 13 421 1.5E-240 T 19-04-2016 APA12_RS08305 86226857e6642a73cc96ff91a22182f8 426 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 31 426 48.432 T 19-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 APA12_RS08305 86226857e6642a73cc96ff91a22182f8 426 SUPERFAMILY SSF56762 52 426 7.46E-134 T 19-04-2016 IPR029014 NiFe hydrogenase-like APA12_RS08305 86226857e6642a73cc96ff91a22182f8 426 Gene3D G3DSA:1.10.645.10 41 411 6.3E-64 T 19-04-2016 IPR029014 NiFe hydrogenase-like APA12_RS08305 86226857e6642a73cc96ff91a22182f8 426 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 156 426 5.1E-121 T 19-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 APA12_RS08305 86226857e6642a73cc96ff91a22182f8 426 PANTHER PTHR11993:SF10 13 421 1.5E-240 T 19-04-2016 APA12_RS00145 2d2d048a7e2bcdebd17ed4973d4dc137 340 SUPERFAMILY SSF55347 128 318 1.77E-74 T 19-04-2016 APA12_RS00145 2d2d048a7e2bcdebd17ed4973d4dc137 340 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 2 331 35.93 T 19-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APA12_RS00145 2d2d048a7e2bcdebd17ed4973d4dc137 340 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 4 332 1.5E-139 T 19-04-2016 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APA12_RS00145 2d2d048a7e2bcdebd17ed4973d4dc137 340 PIRSF PIRSF000148 2 336 1.0E-129 T 19-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APA12_RS00145 2d2d048a7e2bcdebd17ed4973d4dc137 340 Gene3D G3DSA:3.40.50.720 2 141 7.8E-65 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS00145 2d2d048a7e2bcdebd17ed4973d4dc137 340 SUPERFAMILY SSF51735 3 156 7.82E-54 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS00145 2d2d048a7e2bcdebd17ed4973d4dc137 340 PANTHER PTHR10174 66 331 3.3E-77 T 19-04-2016 APA12_RS00145 2d2d048a7e2bcdebd17ed4973d4dc137 340 Gene3D G3DSA:3.30.360.10 142 313 9.3E-79 T 19-04-2016 APA12_RS00145 2d2d048a7e2bcdebd17ed4973d4dc137 340 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 138 317 6.0E-56 T 19-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APA12_RS00145 2d2d048a7e2bcdebd17ed4973d4dc137 340 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 118 2.0E-32 T 19-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 APA12_RS00145 2d2d048a7e2bcdebd17ed4973d4dc137 340 SMART SM00859 4 119 1.6E-48 T 19-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 APA12_RS03420 41e83c71e671be1125a80c4565c313c3 206 PANTHER PTHR33231 1 202 1.9E-30 T 19-04-2016 APA12_RS03420 41e83c71e671be1125a80c4565c313c3 206 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 100 9.2E-17 T 19-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APA12_RS03420 41e83c71e671be1125a80c4565c313c3 206 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 148 199 1.4E-15 T 19-04-2016 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal APA12_RS03420 41e83c71e671be1125a80c4565c313c3 206 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 94 1.5E-17 T 19-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APA12_RS03420 41e83c71e671be1125a80c4565c313c3 206 Gene3D G3DSA:3.30.160.100 1 97 1.2E-20 T 19-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APA12_RS03420 41e83c71e671be1125a80c4565c313c3 206 SUPERFAMILY SSF69754 1 100 1.14E-21 T 19-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APA12_RS09400 505dd09510bacab025d430a8cedaf41d 200 Gene3D G3DSA:2.40.30.20 103 196 5.4E-25 T 19-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APA12_RS09400 505dd09510bacab025d430a8cedaf41d 200 Gene3D G3DSA:2.40.30.20 5 102 8.5E-25 T 19-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APA12_RS09400 505dd09510bacab025d430a8cedaf41d 200 SUPERFAMILY SSF63380 1 86 2.38E-19 T 19-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APA12_RS09400 505dd09510bacab025d430a8cedaf41d 200 Pfam PF00677 Lumazine binding domain 98 187 4.4E-19 T 19-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APA12_RS09400 505dd09510bacab025d430a8cedaf41d 200 Pfam PF00677 Lumazine binding domain 3 85 7.4E-19 T 19-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APA12_RS09400 505dd09510bacab025d430a8cedaf41d 200 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 196 7.1E-54 T 19-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APA12_RS09400 505dd09510bacab025d430a8cedaf41d 200 PANTHER PTHR21098 1 194 3.4E-80 T 19-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APA12_RS09400 505dd09510bacab025d430a8cedaf41d 200 PIRSF PIRSF000498 1 200 1.3E-63 T 19-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APA12_RS09400 505dd09510bacab025d430a8cedaf41d 200 SUPERFAMILY SSF63380 91 197 7.65E-27 T 19-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APA12_RS03800 ac671cd500ccfe0e6512048c4961ebcb 214 Pfam PF02481 DNA recombination-mediator protein A 3 71 2.4E-20 T 19-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 APA12_RS03800 ac671cd500ccfe0e6512048c4961ebcb 214 PANTHER PTHR32039:SF8 128 203 3.2E-28 T 19-04-2016 APA12_RS03800 ac671cd500ccfe0e6512048c4961ebcb 214 SUPERFAMILY SSF102405 2 81 6.41E-13 T 19-04-2016 APA12_RS03800 ac671cd500ccfe0e6512048c4961ebcb 214 PANTHER PTHR32039 128 203 3.2E-28 T 19-04-2016 APA12_RS03800 ac671cd500ccfe0e6512048c4961ebcb 214 PANTHER PTHR32039 2 112 3.2E-28 T 19-04-2016 APA12_RS03800 ac671cd500ccfe0e6512048c4961ebcb 214 PANTHER PTHR32039:SF8 2 112 3.2E-28 T 19-04-2016 APA12_RS07175 47d7466df3ad2c3dde918f26e4337b36 147 SUPERFAMILY SSF56935 1 147 1.33E-21 T 19-04-2016 APA12_RS07175 47d7466df3ad2c3dde918f26e4337b36 147 PANTHER PTHR32552:SF17 1 147 5.5E-22 T 19-04-2016 APA12_RS07175 47d7466df3ad2c3dde918f26e4337b36 147 PANTHER PTHR32552 1 147 5.5E-22 T 19-04-2016 APA12_RS07175 47d7466df3ad2c3dde918f26e4337b36 147 Pfam PF00593 TonB dependent receptor 1 146 1.1E-10 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS07175 47d7466df3ad2c3dde918f26e4337b36 147 Gene3D G3DSA:2.40.170.20 1 147 1.0E-29 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS11675 e1627c130358f24fb0cd741fecffab5f 261 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 21 254 7.0E-68 T 19-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase APA12_RS11675 e1627c130358f24fb0cd741fecffab5f 261 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 27 240 9.8E-51 T 19-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase APA12_RS11675 e1627c130358f24fb0cd741fecffab5f 261 PANTHER PTHR30616 11 258 7.2E-75 T 19-04-2016 APA12_RS11675 e1627c130358f24fb0cd741fecffab5f 261 Gene3D G3DSA:3.60.140.10 9 255 2.2E-82 T 19-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase APA12_RS11675 e1627c130358f24fb0cd741fecffab5f 261 SUPERFAMILY SSF64438 5 255 5.13E-77 T 19-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic APA12_RS07775 5f1bbd3322a82a7375e90b0c7918ce5d 537 PANTHER PTHR30365 386 530 3.1E-213 T 19-04-2016 APA12_RS07775 5f1bbd3322a82a7375e90b0c7918ce5d 537 PANTHER PTHR30365:SF0 1 315 3.1E-213 T 19-04-2016 APA12_RS07775 5f1bbd3322a82a7375e90b0c7918ce5d 537 PANTHER PTHR30365:SF0 386 530 3.1E-213 T 19-04-2016 APA12_RS07775 5f1bbd3322a82a7375e90b0c7918ce5d 537 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 11 511 8.3E-164 T 19-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 APA12_RS07775 5f1bbd3322a82a7375e90b0c7918ce5d 537 PANTHER PTHR30365 1 315 3.1E-213 T 19-04-2016 APA12_RS00435 8829251c10932ba5cf9b96c7ee6b787a 472 Gene3D G3DSA:1.10.760.10 173 295 1.1E-9 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS00435 8829251c10932ba5cf9b96c7ee6b787a 472 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 322 404 1.8E-9 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS00435 8829251c10932ba5cf9b96c7ee6b787a 472 PIRSF PIRSF000018 1 444 1.8E-169 T 19-04-2016 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 APA12_RS00435 8829251c10932ba5cf9b96c7ee6b787a 472 SUPERFAMILY SSF46626 322 417 1.45E-23 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS00435 8829251c10932ba5cf9b96c7ee6b787a 472 Gene3D G3DSA:1.10.760.10 31 133 2.9E-14 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS00435 8829251c10932ba5cf9b96c7ee6b787a 472 Pfam PF00034 Cytochrome c 37 133 9.8E-5 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS00435 8829251c10932ba5cf9b96c7ee6b787a 472 PANTHER PTHR35008:SF3 30 427 1.9E-175 T 19-04-2016 APA12_RS00435 8829251c10932ba5cf9b96c7ee6b787a 472 SUPERFAMILY SSF46626 24 156 1.87E-21 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS00435 8829251c10932ba5cf9b96c7ee6b787a 472 SUPERFAMILY SSF46626 179 293 4.34E-19 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS00435 8829251c10932ba5cf9b96c7ee6b787a 472 Gene3D G3DSA:1.10.760.10 322 425 1.4E-23 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS00435 8829251c10932ba5cf9b96c7ee6b787a 472 PANTHER PTHR35008 30 427 1.9E-175 T 19-04-2016 APA12_RS07035 f8f4814ae3bd30ea118ec52d14a1a885 304 PANTHER PTHR24220 31 253 3.0E-90 T 19-04-2016 APA12_RS07035 f8f4814ae3bd30ea118ec52d14a1a885 304 SMART SM00382 58 239 2.6E-19 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS07035 f8f4814ae3bd30ea118ec52d14a1a885 304 Gene3D G3DSA:3.40.50.300 27 242 3.6E-69 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS07035 f8f4814ae3bd30ea118ec52d14a1a885 304 SUPERFAMILY SSF52540 30 256 2.46E-73 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS07035 f8f4814ae3bd30ea118ec52d14a1a885 304 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APA12_RS07035 f8f4814ae3bd30ea118ec52d14a1a885 304 Pfam PF00005 ABC transporter 49 188 4.0E-30 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS07035 f8f4814ae3bd30ea118ec52d14a1a885 304 PANTHER PTHR24220:SF10 31 253 3.0E-90 T 19-04-2016 APA12_RS05525 f47386241a671befd1e2d813e61ba59f 399 Pfam PF03453 MoeA N-terminal region (domain I and II) 4 161 1.5E-32 T 19-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 APA12_RS05525 f47386241a671befd1e2d813e61ba59f 399 Gene3D G3DSA:2.40.340.10 326 395 6.1E-7 T 19-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 APA12_RS05525 f47386241a671befd1e2d813e61ba59f 399 Pfam PF00994 Probable molybdopterin binding domain 174 310 1.7E-21 T 19-04-2016 IPR001453 MoaB/Mog domain APA12_RS05525 f47386241a671befd1e2d813e61ba59f 399 Gene3D G3DSA:3.40.980.10 156 317 5.0E-51 T 19-04-2016 IPR001453 MoaB/Mog domain APA12_RS05525 f47386241a671befd1e2d813e61ba59f 399 Pfam PF03454 MoeA C-terminal region (domain IV) 326 396 7.8E-7 T 19-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 APA12_RS05525 f47386241a671befd1e2d813e61ba59f 399 SMART SM00852 174 311 7.6E-39 T 19-04-2016 IPR001453 MoaB/Mog domain APA12_RS05525 f47386241a671befd1e2d813e61ba59f 399 Gene3D G3DSA:2.170.190.11 44 124 1.0E-27 T 19-04-2016 APA12_RS05525 f47386241a671befd1e2d813e61ba59f 399 SUPERFAMILY SSF63882 1 169 8.9E-49 T 19-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 APA12_RS05525 f47386241a671befd1e2d813e61ba59f 399 SUPERFAMILY SSF53218 171 315 4.19E-38 T 19-04-2016 IPR001453 MoaB/Mog domain APA12_RS05525 f47386241a671befd1e2d813e61ba59f 399 PANTHER PTHR10192 1 379 4.4E-116 T 19-04-2016 APA12_RS05525 f47386241a671befd1e2d813e61ba59f 399 SUPERFAMILY SSF63867 323 398 4.97E-10 T 19-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 APA12_RS05525 f47386241a671befd1e2d813e61ba59f 399 Gene3D G3DSA:3.90.105.10 125 155 2.3E-14 T 19-04-2016 APA12_RS00410 a85f4f3d8252d5f54aab45fee59ac046 747 SUPERFAMILY SSF52172 623 742 1.42E-22 T 19-04-2016 IPR011006 CheY-like superfamily APA12_RS00410 a85f4f3d8252d5f54aab45fee59ac046 747 PRINTS PR00344 Bacterial sensor protein C-terminal signature 582 595 1.2E-11 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS00410 a85f4f3d8252d5f54aab45fee59ac046 747 PRINTS PR00344 Bacterial sensor protein C-terminal signature 527 541 1.2E-11 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS00410 a85f4f3d8252d5f54aab45fee59ac046 747 PRINTS PR00344 Bacterial sensor protein C-terminal signature 545 555 1.2E-11 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS00410 a85f4f3d8252d5f54aab45fee59ac046 747 PRINTS PR00344 Bacterial sensor protein C-terminal signature 558 576 1.2E-11 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS00410 a85f4f3d8252d5f54aab45fee59ac046 747 Gene3D G3DSA:1.10.287.130 345 406 2.7E-8 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS00410 a85f4f3d8252d5f54aab45fee59ac046 747 SMART SM00448 623 737 4.9E-14 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS00410 a85f4f3d8252d5f54aab45fee59ac046 747 SUPERFAMILY SSF55785 204 333 1.13E-5 T 19-04-2016 IPR000014 PAS domain APA12_RS00410 a85f4f3d8252d5f54aab45fee59ac046 747 PANTHER PTHR24423 519 744 4.3E-100 T 19-04-2016 APA12_RS00410 a85f4f3d8252d5f54aab45fee59ac046 747 PANTHER PTHR24423 317 493 4.3E-100 T 19-04-2016 APA12_RS00410 a85f4f3d8252d5f54aab45fee59ac046 747 Pfam PF00072 Response regulator receiver domain 625 737 8.6E-15 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS00410 a85f4f3d8252d5f54aab45fee59ac046 747 SUPERFAMILY SSF55874 408 491 2.76E-29 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS00410 a85f4f3d8252d5f54aab45fee59ac046 747 SUPERFAMILY SSF55874 522 596 2.76E-29 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS00410 a85f4f3d8252d5f54aab45fee59ac046 747 Pfam PF00512 His Kinase A (phospho-acceptor) domain 350 417 9.1E-10 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS00410 a85f4f3d8252d5f54aab45fee59ac046 747 SUPERFAMILY SSF47384 345 416 3.34E-11 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS00410 a85f4f3d8252d5f54aab45fee59ac046 747 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 461 596 2.7E-15 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS00410 a85f4f3d8252d5f54aab45fee59ac046 747 Gene3D G3DSA:3.30.450.20 204 333 2.2E-4 T 19-04-2016 APA12_RS00410 a85f4f3d8252d5f54aab45fee59ac046 747 SMART SM00387 460 598 8.3E-28 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS00410 a85f4f3d8252d5f54aab45fee59ac046 747 Pfam PF12860 PAS fold 220 339 3.0E-7 T 19-04-2016 APA12_RS00410 a85f4f3d8252d5f54aab45fee59ac046 747 SMART SM00388 350 418 6.2E-11 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS00410 a85f4f3d8252d5f54aab45fee59ac046 747 PANTHER PTHR24423:SF544 519 744 4.3E-100 T 19-04-2016 APA12_RS00410 a85f4f3d8252d5f54aab45fee59ac046 747 PANTHER PTHR24423:SF544 317 493 4.3E-100 T 19-04-2016 APA12_RS00410 a85f4f3d8252d5f54aab45fee59ac046 747 Gene3D G3DSA:3.40.50.2300 621 744 1.3E-26 T 19-04-2016 APA12_RS00410 a85f4f3d8252d5f54aab45fee59ac046 747 Gene3D G3DSA:3.30.565.10 407 597 1.5E-28 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS01200 a85666fe0d8372faa9e642548b19f51c 327 PRINTS PR00069 Aldo-keto reductase signature 109 127 3.4E-14 T 19-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APA12_RS01200 a85666fe0d8372faa9e642548b19f51c 327 PRINTS PR00069 Aldo-keto reductase signature 140 157 3.4E-14 T 19-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APA12_RS01200 a85666fe0d8372faa9e642548b19f51c 327 PRINTS PR00069 Aldo-keto reductase signature 45 69 3.4E-14 T 19-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APA12_RS01200 a85666fe0d8372faa9e642548b19f51c 327 SUPERFAMILY SSF51430 11 314 6.02E-99 T 19-04-2016 IPR023210 NADP-dependent oxidoreductase domain APA12_RS01200 a85666fe0d8372faa9e642548b19f51c 327 PANTHER PTHR11732 16 309 2.7E-123 T 19-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APA12_RS01200 a85666fe0d8372faa9e642548b19f51c 327 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 140 157 - T 19-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 APA12_RS01200 a85666fe0d8372faa9e642548b19f51c 327 Pfam PF00248 Aldo/keto reductase family 17 308 7.8E-76 T 19-04-2016 IPR023210 NADP-dependent oxidoreductase domain APA12_RS01200 a85666fe0d8372faa9e642548b19f51c 327 Gene3D G3DSA:3.20.20.100 16 310 5.2E-102 T 19-04-2016 IPR023210 NADP-dependent oxidoreductase domain APA12_RS11880 60e729a83418fa20d4bdf8d9fb8e08dc 142 Pfam PF13683 Integrase core domain 47 112 2.4E-19 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APA12_RS11880 60e729a83418fa20d4bdf8d9fb8e08dc 142 SUPERFAMILY SSF53098 1 118 5.31E-36 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS11880 60e729a83418fa20d4bdf8d9fb8e08dc 142 Gene3D G3DSA:3.30.420.10 3 112 4.1E-22 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS11880 60e729a83418fa20d4bdf8d9fb8e08dc 142 PANTHER PTHR32552 28 114 4.3E-12 T 19-04-2016 APA12_RS00465 6f043a0b4f1381fe753f50a76ecb485a 663 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 504 1.1E-136 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APA12_RS00465 6f043a0b4f1381fe753f50a76ecb485a 663 SUPERFAMILY SSF81442 43 561 1.57E-174 T 19-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APA12_RS00465 6f043a0b4f1381fe753f50a76ecb485a 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 2.2E-91 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APA12_RS00465 6f043a0b4f1381fe753f50a76ecb485a 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 2.2E-91 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APA12_RS00465 6f043a0b4f1381fe753f50a76ecb485a 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 2.2E-91 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APA12_RS00465 6f043a0b4f1381fe753f50a76ecb485a 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 2.2E-91 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APA12_RS00465 6f043a0b4f1381fe753f50a76ecb485a 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 2.2E-91 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APA12_RS00465 6f043a0b4f1381fe753f50a76ecb485a 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 2.2E-91 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APA12_RS00465 6f043a0b4f1381fe753f50a76ecb485a 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 2.2E-91 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APA12_RS00465 6f043a0b4f1381fe753f50a76ecb485a 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 2.2E-91 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APA12_RS00465 6f043a0b4f1381fe753f50a76ecb485a 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 2.2E-91 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APA12_RS00465 6f043a0b4f1381fe753f50a76ecb485a 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 2.2E-91 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APA12_RS00465 6f043a0b4f1381fe753f50a76ecb485a 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 2.2E-91 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APA12_RS00465 6f043a0b4f1381fe753f50a76ecb485a 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 2.2E-91 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APA12_RS00465 6f043a0b4f1381fe753f50a76ecb485a 663 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 19-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APA12_RS00465 6f043a0b4f1381fe753f50a76ecb485a 663 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 650 0.0 T 19-04-2016 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 APA12_RS00465 6f043a0b4f1381fe753f50a76ecb485a 663 PANTHER PTHR10422 33 617 0.0 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APA12_RS00465 6f043a0b4f1381fe753f50a76ecb485a 663 PANTHER PTHR10422:SF26 33 617 0.0 T 19-04-2016 APA12_RS00465 6f043a0b4f1381fe753f50a76ecb485a 663 Gene3D G3DSA:1.20.210.10 40 592 6.3E-183 T 19-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APA12_RS06160 0729ffedfd43e1fb9d91ab249960505d 288 PANTHER PTHR22854 1 285 4.2E-102 T 19-04-2016 APA12_RS06160 0729ffedfd43e1fb9d91ab249960505d 288 Gene3D G3DSA:3.20.20.70 26 286 8.3E-99 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS06160 0729ffedfd43e1fb9d91ab249960505d 288 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 26 286 34.631 T 19-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 APA12_RS06160 0729ffedfd43e1fb9d91ab249960505d 288 PANTHER PTHR22854:SF2 1 285 4.2E-102 T 19-04-2016 APA12_RS06160 0729ffedfd43e1fb9d91ab249960505d 288 SUPERFAMILY SSF51366 36 286 8.71E-85 T 19-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APA12_RS06160 0729ffedfd43e1fb9d91ab249960505d 288 Pfam PF00218 Indole-3-glycerol phosphate synthase 28 284 2.8E-91 T 19-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 APA12_RS06160 0729ffedfd43e1fb9d91ab249960505d 288 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 80 98 - T 19-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 APA12_RS09960 5b4af2f26a50c2aec379896467247844 140 Pfam PF00334 Nucleoside diphosphate kinase 4 138 2.2E-53 T 19-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APA12_RS09960 5b4af2f26a50c2aec379896467247844 140 SMART SM00562 3 140 8.7E-83 T 19-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APA12_RS09960 5b4af2f26a50c2aec379896467247844 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 1.03E-35 T 19-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APA12_RS09960 5b4af2f26a50c2aec379896467247844 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 1.03E-35 T 19-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APA12_RS09960 5b4af2f26a50c2aec379896467247844 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 1.03E-35 T 19-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APA12_RS09960 5b4af2f26a50c2aec379896467247844 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 1.03E-35 T 19-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APA12_RS09960 5b4af2f26a50c2aec379896467247844 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 1.03E-35 T 19-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APA12_RS09960 5b4af2f26a50c2aec379896467247844 140 SUPERFAMILY SSF54919 1 139 8.25E-56 T 19-04-2016 APA12_RS09960 5b4af2f26a50c2aec379896467247844 140 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 33.356 T 19-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APA12_RS09960 5b4af2f26a50c2aec379896467247844 140 PANTHER PTHR11349 1 140 5.0E-67 T 19-04-2016 APA12_RS09960 5b4af2f26a50c2aec379896467247844 140 Gene3D G3DSA:3.30.70.141 1 138 2.8E-57 T 19-04-2016 APA12_RS00115 278ac933bbb7cb85de0c8e0af9c46de1 391 PANTHER PTHR21152 9 385 3.3E-151 T 19-04-2016 APA12_RS00115 278ac933bbb7cb85de0c8e0af9c46de1 391 TIGRFAM TIGR01365 serC_2: phosphoserine aminotransferase 15 387 1.2E-172 T 19-04-2016 IPR006271 Phosphoserine aminotransferase, Methanosarcina-type GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 APA12_RS00115 278ac933bbb7cb85de0c8e0af9c46de1 391 SUPERFAMILY SSF53383 16 385 1.48E-64 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APA12_RS00115 278ac933bbb7cb85de0c8e0af9c46de1 391 PANTHER PTHR21152:SF23 9 385 3.3E-151 T 19-04-2016 APA12_RS00115 278ac933bbb7cb85de0c8e0af9c46de1 391 PIRSF PIRSF000525 11 388 1.0E-45 T 19-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 APA12_RS00115 278ac933bbb7cb85de0c8e0af9c46de1 391 Gene3D G3DSA:3.40.640.10 27 270 7.6E-42 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APA12_RS00115 278ac933bbb7cb85de0c8e0af9c46de1 391 Pfam PF00266 Aminotransferase class-V 98 321 8.5E-5 T 19-04-2016 IPR000192 Aminotransferase class V domain APA12_RS06765 9dc75c5ebd89169e7c140bf2b5fb65e4 364 Pfam PF07690 Major Facilitator Superfamily 52 317 2.5E-29 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APA12_RS06765 9dc75c5ebd89169e7c140bf2b5fb65e4 364 SUPERFAMILY SSF103473 50 360 4.05E-58 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS06765 9dc75c5ebd89169e7c140bf2b5fb65e4 364 PANTHER PTHR23508:SF18 51 363 6.2E-128 T 19-04-2016 APA12_RS06765 9dc75c5ebd89169e7c140bf2b5fb65e4 364 Gene3D G3DSA:1.20.1250.20 176 359 3.5E-22 T 19-04-2016 APA12_RS06765 9dc75c5ebd89169e7c140bf2b5fb65e4 364 PANTHER PTHR23508 51 363 6.2E-128 T 19-04-2016 APA12_RS06765 9dc75c5ebd89169e7c140bf2b5fb65e4 364 Gene3D G3DSA:1.20.1250.20 49 160 2.6E-19 T 19-04-2016 APA12_RS06765 9dc75c5ebd89169e7c140bf2b5fb65e4 364 ProSitePatterns PS00216 Sugar transport proteins signature 1. 232 249 - T 19-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APA12_RS06765 9dc75c5ebd89169e7c140bf2b5fb65e4 364 ProSitePatterns PS00217 Sugar transport proteins signature 2. 68 93 - T 19-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APA12_RS07530 d703e0d11bce32ef1cf8d8ea195c314b 297 ProSitePatterns PS01125 ROK family signature. 132 159 - T 19-04-2016 IPR000600 ROK family APA12_RS07530 d703e0d11bce32ef1cf8d8ea195c314b 297 PANTHER PTHR18964 7 296 1.3E-81 T 19-04-2016 APA12_RS07530 d703e0d11bce32ef1cf8d8ea195c314b 297 SUPERFAMILY SSF53067 4 296 8.4E-63 T 19-04-2016 APA12_RS07530 d703e0d11bce32ef1cf8d8ea195c314b 297 Gene3D G3DSA:3.30.420.40 136 275 3.8E-44 T 19-04-2016 APA12_RS07530 d703e0d11bce32ef1cf8d8ea195c314b 297 Pfam PF00480 ROK family 6 296 9.3E-78 T 19-04-2016 IPR000600 ROK family APA12_RS07530 d703e0d11bce32ef1cf8d8ea195c314b 297 Gene3D G3DSA:3.30.420.40 3 135 5.9E-39 T 19-04-2016 APA12_RS07530 d703e0d11bce32ef1cf8d8ea195c314b 297 PANTHER PTHR18964:SF134 7 296 1.3E-81 T 19-04-2016 APA12_RS13295 3bf0b289ade189869806b73bfdecab40 137 SUPERFAMILY SSF54637 2 132 8.72E-37 T 19-04-2016 IPR029069 HotDog domain APA12_RS13295 3bf0b289ade189869806b73bfdecab40 137 PANTHER PTHR31793 2 133 2.2E-37 T 19-04-2016 APA12_RS13295 3bf0b289ade189869806b73bfdecab40 137 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 8 122 1.5E-28 T 19-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 APA12_RS13295 3bf0b289ade189869806b73bfdecab40 137 Gene3D G3DSA:3.10.129.10 3 133 1.2E-40 T 19-04-2016 IPR029069 HotDog domain APA12_RS13295 3bf0b289ade189869806b73bfdecab40 137 Pfam PF13279 Thioesterase-like superfamily 13 124 1.6E-15 T 19-04-2016 APA12_RS13295 3bf0b289ade189869806b73bfdecab40 137 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 9 26 - T 19-04-2016 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 APA12_RS13295 3bf0b289ade189869806b73bfdecab40 137 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 4 127 6.0E-43 T 19-04-2016 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- APA12_RS13295 3bf0b289ade189869806b73bfdecab40 137 PIRSF PIRSF003230 1 136 4.5E-42 T 19-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 APA12_RS13295 3bf0b289ade189869806b73bfdecab40 137 PANTHER PTHR31793:SF9 2 133 2.2E-37 T 19-04-2016 APA12_RS12085 b19922a393e09f005dd5bcdb35a854bc 150 SMART SM00347 35 135 2.0E-8 T 19-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APA12_RS12085 b19922a393e09f005dd5bcdb35a854bc 150 PANTHER PTHR33164:SF8 8 145 3.5E-22 T 19-04-2016 APA12_RS12085 b19922a393e09f005dd5bcdb35a854bc 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 125 145 4.7E-5 T 19-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APA12_RS12085 b19922a393e09f005dd5bcdb35a854bc 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 95 111 4.7E-5 T 19-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APA12_RS12085 b19922a393e09f005dd5bcdb35a854bc 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 59 75 4.7E-5 T 19-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APA12_RS12085 b19922a393e09f005dd5bcdb35a854bc 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 76 91 4.7E-5 T 19-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APA12_RS12085 b19922a393e09f005dd5bcdb35a854bc 150 Pfam PF01047 MarR family 42 99 7.2E-7 T 19-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APA12_RS12085 b19922a393e09f005dd5bcdb35a854bc 150 Gene3D G3DSA:1.10.10.10 6 146 4.9E-29 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS12085 b19922a393e09f005dd5bcdb35a854bc 150 SUPERFAMILY SSF46785 11 147 4.07E-26 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS12085 b19922a393e09f005dd5bcdb35a854bc 150 PANTHER PTHR33164 8 145 3.5E-22 T 19-04-2016 APA12_RS10065 ccf12c03e67c70aa32c134aae85a67fd 482 Gene3D G3DSA:3.50.50.60 240 401 1.5E-47 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS10065 ccf12c03e67c70aa32c134aae85a67fd 482 SUPERFAMILY SSF46548 3 157 8.89E-35 T 19-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APA12_RS10065 ccf12c03e67c70aa32c134aae85a67fd 482 Gene3D G3DSA:1.10.1060.10 7 150 5.7E-41 T 19-04-2016 APA12_RS10065 ccf12c03e67c70aa32c134aae85a67fd 482 SUPERFAMILY SSF51971 147 402 1.29E-65 T 19-04-2016 APA12_RS10065 ccf12c03e67c70aa32c134aae85a67fd 482 PRINTS PR00419 Adrenodoxin reductase family signature 327 340 1.6E-29 T 19-04-2016 APA12_RS10065 ccf12c03e67c70aa32c134aae85a67fd 482 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 1.6E-29 T 19-04-2016 APA12_RS10065 ccf12c03e67c70aa32c134aae85a67fd 482 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 1.6E-29 T 19-04-2016 APA12_RS10065 ccf12c03e67c70aa32c134aae85a67fd 482 PRINTS PR00419 Adrenodoxin reductase family signature 293 307 1.6E-29 T 19-04-2016 APA12_RS10065 ccf12c03e67c70aa32c134aae85a67fd 482 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 24 134 3.2E-35 T 19-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II APA12_RS10065 ccf12c03e67c70aa32c134aae85a67fd 482 Gene3D G3DSA:3.40.50.720 151 239 3.4E-34 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS10065 ccf12c03e67c70aa32c134aae85a67fd 482 Gene3D G3DSA:3.40.50.720 402 478 3.4E-34 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS10065 ccf12c03e67c70aa32c134aae85a67fd 482 PANTHER PTHR11938:SF93 20 471 2.2E-138 T 19-04-2016 APA12_RS10065 ccf12c03e67c70aa32c134aae85a67fd 482 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 7 470 2.1E-162 T 19-04-2016 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 APA12_RS10065 ccf12c03e67c70aa32c134aae85a67fd 482 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 148 458 6.6E-29 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS10065 ccf12c03e67c70aa32c134aae85a67fd 482 PANTHER PTHR11938 20 471 2.2E-138 T 19-04-2016 APA12_RS04830 55119e69174521be26cd748fe3da026c 141 Pfam PF01196 Ribosomal protein L17 20 116 1.7E-38 T 19-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04830 55119e69174521be26cd748fe3da026c 141 TIGRFAM TIGR00059 L17: ribosomal protein bL17 8 117 2.4E-47 T 19-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04830 55119e69174521be26cd748fe3da026c 141 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 27.092 T 19-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04830 55119e69174521be26cd748fe3da026c 141 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 19-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04830 55119e69174521be26cd748fe3da026c 141 SUPERFAMILY SSF64263 1 119 1.31E-51 T 19-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04830 55119e69174521be26cd748fe3da026c 141 PANTHER PTHR14413 1 129 3.6E-69 T 19-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04830 55119e69174521be26cd748fe3da026c 141 Gene3D G3DSA:3.90.1030.10 1 117 9.5E-53 T 19-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04830 55119e69174521be26cd748fe3da026c 141 PANTHER PTHR14413:SF5 1 129 3.6E-69 T 19-04-2016 APA12_RS03275 ecfb1ed2e1b7452252b6f9ac30b28b59 238 SUPERFAMILY SSF54768 127 236 5.34E-23 T 19-04-2016 APA12_RS03275 ecfb1ed2e1b7452252b6f9ac30b28b59 238 Gene3D G3DSA:3.30.160.20 170 237 1.1E-20 T 19-04-2016 IPR014720 Double-stranded RNA-binding domain APA12_RS03275 ecfb1ed2e1b7452252b6f9ac30b28b59 238 PANTHER PTHR11207 8 237 9.4E-62 T 19-04-2016 APA12_RS03275 ecfb1ed2e1b7452252b6f9ac30b28b59 238 Hamap MF_00104 Ribonuclease 3 [rnc]. 12 233 25.871 T 19-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 APA12_RS03275 ecfb1ed2e1b7452252b6f9ac30b28b59 238 SMART SM00535 24 166 5.8E-37 T 19-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APA12_RS03275 ecfb1ed2e1b7452252b6f9ac30b28b59 238 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 13 236 1.8E-60 T 19-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 APA12_RS03275 ecfb1ed2e1b7452252b6f9ac30b28b59 238 Pfam PF00035 Double-stranded RNA binding motif 171 236 7.2E-12 T 19-04-2016 IPR014720 Double-stranded RNA-binding domain APA12_RS03275 ecfb1ed2e1b7452252b6f9ac30b28b59 238 Pfam PF14622 Ribonuclease-III-like 22 157 1.5E-28 T 19-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APA12_RS03275 ecfb1ed2e1b7452252b6f9ac30b28b59 238 Gene3D G3DSA:1.10.1520.10 9 162 8.3E-40 T 19-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APA12_RS03275 ecfb1ed2e1b7452252b6f9ac30b28b59 238 SMART SM00358 171 237 1.7E-20 T 19-04-2016 IPR014720 Double-stranded RNA-binding domain APA12_RS03275 ecfb1ed2e1b7452252b6f9ac30b28b59 238 SUPERFAMILY SSF69065 8 173 1.12E-39 T 19-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APA12_RS07535 1436548a9a205dff0ab959f5c3f261bf 83 Pfam PF01206 Sulfurtransferase TusA 5 72 1.0E-21 T 19-04-2016 IPR001455 TusA-like domain APA12_RS07535 1436548a9a205dff0ab959f5c3f261bf 83 PANTHER PTHR33279 5 72 2.3E-16 T 19-04-2016 APA12_RS07535 1436548a9a205dff0ab959f5c3f261bf 83 Gene3D G3DSA:3.30.110.40 4 72 1.2E-24 T 19-04-2016 IPR001455 TusA-like domain APA12_RS07535 1436548a9a205dff0ab959f5c3f261bf 83 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 6 30 - T 19-04-2016 IPR001455 TusA-like domain APA12_RS07535 1436548a9a205dff0ab959f5c3f261bf 83 SUPERFAMILY SSF64307 5 72 5.36E-22 T 19-04-2016 IPR001455 TusA-like domain APA12_RS13590 b7e50bff9e23671afacc56b86762dac8 272 Pfam PF09979 Uncharacterized protein conserved in bacteria (DUF2213) 14 177 1.3E-45 T 19-04-2016 IPR016913 Uncharacterised conserved protein UCP029215 APA12_RS10985 c9345ca444340c1369764fd3b4944d37 536 Pfam PF03050 Transposase IS66 family 183 479 1.0E-94 T 19-04-2016 IPR004291 Transposase, IS66 APA12_RS10985 c9345ca444340c1369764fd3b4944d37 536 Pfam PF13007 Transposase C of IS166 homeodomain 43 119 1.9E-11 T 19-04-2016 IPR024463 Transposase TnpC, homeodomain APA12_RS10985 c9345ca444340c1369764fd3b4944d37 536 PANTHER PTHR33678 21 522 9.8E-109 T 19-04-2016 APA12_RS10985 c9345ca444340c1369764fd3b4944d37 536 PANTHER PTHR33678:SF1 21 522 9.8E-109 T 19-04-2016 APA12_RS10985 c9345ca444340c1369764fd3b4944d37 536 Pfam PF13005 zinc-finger binding domain of transposase IS66 126 168 1.8E-14 T 19-04-2016 IPR024474 Zinc-finger binding domain of transposase IS66 APA12_RS10985 c9345ca444340c1369764fd3b4944d37 536 Pfam PF13817 IS66 C-terminal element 486 523 6.9E-16 T 19-04-2016 APA12_RS09070 c9345ca444340c1369764fd3b4944d37 536 Pfam PF03050 Transposase IS66 family 183 479 1.0E-94 T 19-04-2016 IPR004291 Transposase, IS66 APA12_RS09070 c9345ca444340c1369764fd3b4944d37 536 Pfam PF13007 Transposase C of IS166 homeodomain 43 119 1.9E-11 T 19-04-2016 IPR024463 Transposase TnpC, homeodomain APA12_RS09070 c9345ca444340c1369764fd3b4944d37 536 PANTHER PTHR33678 21 522 9.8E-109 T 19-04-2016 APA12_RS09070 c9345ca444340c1369764fd3b4944d37 536 PANTHER PTHR33678:SF1 21 522 9.8E-109 T 19-04-2016 APA12_RS09070 c9345ca444340c1369764fd3b4944d37 536 Pfam PF13005 zinc-finger binding domain of transposase IS66 126 168 1.8E-14 T 19-04-2016 IPR024474 Zinc-finger binding domain of transposase IS66 APA12_RS09070 c9345ca444340c1369764fd3b4944d37 536 Pfam PF13817 IS66 C-terminal element 486 523 6.9E-16 T 19-04-2016 APA12_RS00890 c9345ca444340c1369764fd3b4944d37 536 Pfam PF03050 Transposase IS66 family 183 479 1.0E-94 T 19-04-2016 IPR004291 Transposase, IS66 APA12_RS00890 c9345ca444340c1369764fd3b4944d37 536 Pfam PF13007 Transposase C of IS166 homeodomain 43 119 1.9E-11 T 19-04-2016 IPR024463 Transposase TnpC, homeodomain APA12_RS00890 c9345ca444340c1369764fd3b4944d37 536 PANTHER PTHR33678 21 522 9.8E-109 T 19-04-2016 APA12_RS00890 c9345ca444340c1369764fd3b4944d37 536 PANTHER PTHR33678:SF1 21 522 9.8E-109 T 19-04-2016 APA12_RS00890 c9345ca444340c1369764fd3b4944d37 536 Pfam PF13005 zinc-finger binding domain of transposase IS66 126 168 1.8E-14 T 19-04-2016 IPR024474 Zinc-finger binding domain of transposase IS66 APA12_RS00890 c9345ca444340c1369764fd3b4944d37 536 Pfam PF13817 IS66 C-terminal element 486 523 6.9E-16 T 19-04-2016 APA12_RS09220 c9345ca444340c1369764fd3b4944d37 536 Pfam PF03050 Transposase IS66 family 183 479 1.0E-94 T 19-04-2016 IPR004291 Transposase, IS66 APA12_RS09220 c9345ca444340c1369764fd3b4944d37 536 Pfam PF13007 Transposase C of IS166 homeodomain 43 119 1.9E-11 T 19-04-2016 IPR024463 Transposase TnpC, homeodomain APA12_RS09220 c9345ca444340c1369764fd3b4944d37 536 PANTHER PTHR33678 21 522 9.8E-109 T 19-04-2016 APA12_RS09220 c9345ca444340c1369764fd3b4944d37 536 PANTHER PTHR33678:SF1 21 522 9.8E-109 T 19-04-2016 APA12_RS09220 c9345ca444340c1369764fd3b4944d37 536 Pfam PF13005 zinc-finger binding domain of transposase IS66 126 168 1.8E-14 T 19-04-2016 IPR024474 Zinc-finger binding domain of transposase IS66 APA12_RS09220 c9345ca444340c1369764fd3b4944d37 536 Pfam PF13817 IS66 C-terminal element 486 523 6.9E-16 T 19-04-2016 APA12_RS04245 c9345ca444340c1369764fd3b4944d37 536 Pfam PF03050 Transposase IS66 family 183 479 1.0E-94 T 19-04-2016 IPR004291 Transposase, IS66 APA12_RS04245 c9345ca444340c1369764fd3b4944d37 536 Pfam PF13007 Transposase C of IS166 homeodomain 43 119 1.9E-11 T 19-04-2016 IPR024463 Transposase TnpC, homeodomain APA12_RS04245 c9345ca444340c1369764fd3b4944d37 536 PANTHER PTHR33678 21 522 9.8E-109 T 19-04-2016 APA12_RS04245 c9345ca444340c1369764fd3b4944d37 536 PANTHER PTHR33678:SF1 21 522 9.8E-109 T 19-04-2016 APA12_RS04245 c9345ca444340c1369764fd3b4944d37 536 Pfam PF13005 zinc-finger binding domain of transposase IS66 126 168 1.8E-14 T 19-04-2016 IPR024474 Zinc-finger binding domain of transposase IS66 APA12_RS04245 c9345ca444340c1369764fd3b4944d37 536 Pfam PF13817 IS66 C-terminal element 486 523 6.9E-16 T 19-04-2016 APA12_RS03785 e422d59652b0cf9ff5ea38a90c5a437c 570 PANTHER PTHR32060 146 555 4.5E-70 T 19-04-2016 APA12_RS03785 e422d59652b0cf9ff5ea38a90c5a437c 570 SMART SM00245 291 480 3.4E-31 T 19-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 APA12_RS03785 e422d59652b0cf9ff5ea38a90c5a437c 570 SMART SM00228 218 289 9.2E-6 T 19-04-2016 IPR001478 PDZ domain GO:0005515 APA12_RS03785 e422d59652b0cf9ff5ea38a90c5a437c 570 Pfam PF03572 Peptidase family S41 316 477 1.8E-36 T 19-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 APA12_RS03785 e422d59652b0cf9ff5ea38a90c5a437c 570 Gene3D G3DSA:3.90.226.10 299 489 1.0E-44 T 19-04-2016 IPR029045 ClpP/crotonase-like domain APA12_RS03785 e422d59652b0cf9ff5ea38a90c5a437c 570 SUPERFAMILY SSF50156 192 308 1.6E-13 T 19-04-2016 IPR001478 PDZ domain GO:0005515 APA12_RS03785 e422d59652b0cf9ff5ea38a90c5a437c 570 Gene3D G3DSA:2.30.42.10 220 298 2.8E-15 T 19-04-2016 IPR001478 PDZ domain GO:0005515 APA12_RS03785 e422d59652b0cf9ff5ea38a90c5a437c 570 SUPERFAMILY SSF52096 175 236 1.08E-51 T 19-04-2016 IPR029045 ClpP/crotonase-like domain APA12_RS03785 e422d59652b0cf9ff5ea38a90c5a437c 570 SUPERFAMILY SSF52096 309 485 1.08E-51 T 19-04-2016 IPR029045 ClpP/crotonase-like domain APA12_RS01255 0d1b0696ddff41443043b225cdba38ef 359 Pfam PF11798 IMS family HHH motif 170 200 1.9E-5 T 19-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APA12_RS01255 0d1b0696ddff41443043b225cdba38ef 359 SUPERFAMILY SSF56672 5 237 1.78E-93 T 19-04-2016 APA12_RS01255 0d1b0696ddff41443043b225cdba38ef 359 Gene3D G3DSA:1.10.150.20 169 238 3.8E-22 T 19-04-2016 APA12_RS01255 0d1b0696ddff41443043b225cdba38ef 359 Gene3D G3DSA:3.30.70.270 69 167 1.1E-36 T 19-04-2016 APA12_RS01255 0d1b0696ddff41443043b225cdba38ef 359 Hamap MF_01113 DNA polymerase IV [dinB]. 5 357 38.958 T 19-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APA12_RS01255 0d1b0696ddff41443043b225cdba38ef 359 Gene3D G3DSA:3.30.1490.100 244 350 4.1E-31 T 19-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APA12_RS01255 0d1b0696ddff41443043b225cdba38ef 359 PANTHER PTHR11076 6 351 3.6E-150 T 19-04-2016 APA12_RS01255 0d1b0696ddff41443043b225cdba38ef 359 Pfam PF00817 impB/mucB/samB family 11 157 2.0E-51 T 19-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APA12_RS01255 0d1b0696ddff41443043b225cdba38ef 359 Pfam PF11799 impB/mucB/samB family C-terminal domain 238 349 1.3E-19 T 19-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APA12_RS01255 0d1b0696ddff41443043b225cdba38ef 359 SUPERFAMILY SSF100879 241 341 7.06E-28 T 19-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APA12_RS03980 a2977fd99fc06bd8b1b41664edf2b1b0 318 PANTHER PTHR22855 4 314 3.2E-112 T 19-04-2016 APA12_RS03980 a2977fd99fc06bd8b1b41664edf2b1b0 318 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 4 315 46.9 T 19-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APA12_RS03980 a2977fd99fc06bd8b1b41664edf2b1b0 318 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 314 3.5E-130 T 19-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APA12_RS03980 a2977fd99fc06bd8b1b41664edf2b1b0 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 112 130 3.0E-38 T 19-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APA12_RS03980 a2977fd99fc06bd8b1b41664edf2b1b0 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 133 149 3.0E-38 T 19-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APA12_RS03980 a2977fd99fc06bd8b1b41664edf2b1b0 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 196 205 3.0E-38 T 19-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APA12_RS03980 a2977fd99fc06bd8b1b41664edf2b1b0 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 168 181 3.0E-38 T 19-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APA12_RS03980 a2977fd99fc06bd8b1b41664edf2b1b0 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 87 98 3.0E-38 T 19-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APA12_RS03980 a2977fd99fc06bd8b1b41664edf2b1b0 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 152 165 3.0E-38 T 19-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APA12_RS03980 a2977fd99fc06bd8b1b41664edf2b1b0 318 Gene3D G3DSA:3.90.226.10 55 270 3.9E-43 T 19-04-2016 IPR029045 ClpP/crotonase-like domain APA12_RS03980 a2977fd99fc06bd8b1b41664edf2b1b0 318 PANTHER PTHR22855:SF42 4 314 3.2E-112 T 19-04-2016 APA12_RS03980 a2977fd99fc06bd8b1b41664edf2b1b0 318 SUPERFAMILY SSF52096 5 314 3.1E-94 T 19-04-2016 IPR029045 ClpP/crotonase-like domain APA12_RS03980 a2977fd99fc06bd8b1b41664edf2b1b0 318 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 4 146 1.4E-61 T 19-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APA12_RS06010 10ebbcd997ae99f1373f0bb242143d84 268 SUPERFAMILY SSF56655 15 265 2.62E-63 T 19-04-2016 APA12_RS06010 10ebbcd997ae99f1373f0bb242143d84 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 45 65 4.9E-16 T 19-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APA12_RS06010 10ebbcd997ae99f1373f0bb242143d84 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 87 103 4.9E-16 T 19-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APA12_RS06010 10ebbcd997ae99f1373f0bb242143d84 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 213 237 4.9E-16 T 19-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APA12_RS06010 10ebbcd997ae99f1373f0bb242143d84 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 67 83 4.9E-16 T 19-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APA12_RS06010 10ebbcd997ae99f1373f0bb242143d84 268 Gene3D G3DSA:3.30.540.10 14 159 6.0E-38 T 19-04-2016 APA12_RS06010 10ebbcd997ae99f1373f0bb242143d84 268 PANTHER PTHR20854 4 268 3.4E-93 T 19-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APA12_RS06010 10ebbcd997ae99f1373f0bb242143d84 268 Gene3D G3DSA:3.40.190.80 181 265 3.9E-18 T 19-04-2016 APA12_RS06010 10ebbcd997ae99f1373f0bb242143d84 268 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 87 100 - T 19-04-2016 IPR020583 Inositol monophosphatase, metal-binding site APA12_RS06010 10ebbcd997ae99f1373f0bb242143d84 268 Pfam PF00459 Inositol monophosphatase family 14 265 3.9E-44 T 19-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APA12_RS06010 10ebbcd997ae99f1373f0bb242143d84 268 PANTHER PTHR20854:SF38 4 268 3.4E-93 T 19-04-2016 APA12_RS01080 dc5e9517fa0b6fae3deaa694500c87a9 208 Gene3D G3DSA:1.10.10.640 169 204 6.4E-17 T 19-04-2016 IPR023094 Toluene tolerance protein, alpha-helical APA12_RS01080 dc5e9517fa0b6fae3deaa694500c87a9 208 Gene3D G3DSA:1.10.10.640 72 112 6.4E-17 T 19-04-2016 IPR023094 Toluene tolerance protein, alpha-helical APA12_RS01080 dc5e9517fa0b6fae3deaa694500c87a9 208 PANTHER PTHR36573 6 208 2.4E-15 T 19-04-2016 APA12_RS01080 dc5e9517fa0b6fae3deaa694500c87a9 208 Pfam PF05494 MlaC protein 46 197 6.4E-33 T 19-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC APA12_RS05830 b7ff1f591cda640f0fd60e5835714916 499 PANTHER PTHR13847 12 409 3.6E-201 T 19-04-2016 APA12_RS05830 b7ff1f591cda640f0fd60e5835714916 499 PANTHER PTHR13847:SF214 12 409 3.6E-201 T 19-04-2016 APA12_RS05830 b7ff1f591cda640f0fd60e5835714916 499 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 11 496 1.6E-241 T 19-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 APA12_RS05830 b7ff1f591cda640f0fd60e5835714916 499 SUPERFAMILY SSF51905 10 135 2.36E-24 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS05830 b7ff1f591cda640f0fd60e5835714916 499 SUPERFAMILY SSF51905 168 335 2.36E-24 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS05830 b7ff1f591cda640f0fd60e5835714916 499 Gene3D G3DSA:3.50.50.60 153 340 9.1E-19 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS05830 b7ff1f591cda640f0fd60e5835714916 499 Gene3D G3DSA:3.50.50.60 11 78 9.1E-19 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS05830 b7ff1f591cda640f0fd60e5835714916 499 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 12 494 6.9E-230 T 19-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 APA12_RS05830 b7ff1f591cda640f0fd60e5835714916 499 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 8 496 53.435 T 19-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 APA12_RS03995 513c5d94cfde5593c5112ddbaee67784 695 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 30 313 1.4E-14 T 19-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD APA12_RS03995 513c5d94cfde5593c5112ddbaee67784 695 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 583 657 1.6E-7 T 19-04-2016 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal APA12_RS03995 513c5d94cfde5593c5112ddbaee67784 695 PANTHER PTHR34697:SF2 14 652 6.6E-82 T 19-04-2016 APA12_RS03995 513c5d94cfde5593c5112ddbaee67784 695 PANTHER PTHR34697 14 652 6.6E-82 T 19-04-2016 APA12_RS13450 dd7961ab814d9387c3ae4c376a484fdc 124 SUPERFAMILY SSF54197 9 120 1.31E-30 T 19-04-2016 IPR011146 HIT-like domain GO:0003824 APA12_RS13450 dd7961ab814d9387c3ae4c376a484fdc 124 PRINTS PR00332 Histidine triad family signature 104 114 8.3E-19 T 19-04-2016 IPR001310 Histidine triad (HIT) protein APA12_RS13450 dd7961ab814d9387c3ae4c376a484fdc 124 PRINTS PR00332 Histidine triad family signature 35 53 8.3E-19 T 19-04-2016 IPR001310 Histidine triad (HIT) protein APA12_RS13450 dd7961ab814d9387c3ae4c376a484fdc 124 PRINTS PR00332 Histidine triad family signature 14 30 8.3E-19 T 19-04-2016 IPR001310 Histidine triad (HIT) protein APA12_RS13450 dd7961ab814d9387c3ae4c376a484fdc 124 Pfam PF01230 HIT domain 20 117 5.4E-24 T 19-04-2016 IPR001310 Histidine triad (HIT) protein APA12_RS13450 dd7961ab814d9387c3ae4c376a484fdc 124 PANTHER PTHR23089:SF2 11 119 1.1E-35 T 19-04-2016 APA12_RS13450 dd7961ab814d9387c3ae4c376a484fdc 124 Gene3D G3DSA:3.30.428.10 7 118 1.7E-29 T 19-04-2016 IPR011146 HIT-like domain GO:0003824 APA12_RS13450 dd7961ab814d9387c3ae4c376a484fdc 124 ProSitePatterns PS00892 HIT domain signature. 97 115 - T 19-04-2016 IPR019808 Histidine triad, conserved site APA12_RS13450 dd7961ab814d9387c3ae4c376a484fdc 124 PANTHER PTHR23089 11 119 1.1E-35 T 19-04-2016 IPR001310 Histidine triad (HIT) protein APA12_RS04635 4a04bbcb1ca1346039af647795b3b4db 448 SUPERFAMILY SSF55874 274 439 7.2E-37 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS04635 4a04bbcb1ca1346039af647795b3b4db 448 SMART SM00388 216 283 1.4E-7 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS04635 4a04bbcb1ca1346039af647795b3b4db 448 SUPERFAMILY SSF47384 199 283 1.18E-12 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS04635 4a04bbcb1ca1346039af647795b3b4db 448 SMART SM00304 162 215 2.1E-7 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APA12_RS04635 4a04bbcb1ca1346039af647795b3b4db 448 Pfam PF00512 His Kinase A (phospho-acceptor) domain 222 282 1.1E-6 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS04635 4a04bbcb1ca1346039af647795b3b4db 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 380 1.5E-7 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS04635 4a04bbcb1ca1346039af647795b3b4db 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 417 1.5E-7 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS04635 4a04bbcb1ca1346039af647795b3b4db 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 437 1.5E-7 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS04635 4a04bbcb1ca1346039af647795b3b4db 448 Gene3D G3DSA:1.10.287.130 206 278 2.2E-10 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS04635 4a04bbcb1ca1346039af647795b3b4db 448 PANTHER PTHR24423 98 122 4.4E-60 T 19-04-2016 APA12_RS04635 4a04bbcb1ca1346039af647795b3b4db 448 PANTHER PTHR24423 156 437 4.4E-60 T 19-04-2016 APA12_RS04635 4a04bbcb1ca1346039af647795b3b4db 448 SUPERFAMILY SSF158472 166 214 4.71E-7 T 19-04-2016 APA12_RS04635 4a04bbcb1ca1346039af647795b3b4db 448 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 329 438 2.0E-18 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS04635 4a04bbcb1ca1346039af647795b3b4db 448 Pfam PF00672 HAMP domain 143 212 6.3E-11 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APA12_RS04635 4a04bbcb1ca1346039af647795b3b4db 448 SMART SM00387 329 440 7.6E-32 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS04635 4a04bbcb1ca1346039af647795b3b4db 448 Gene3D G3DSA:3.30.565.10 291 439 4.6E-35 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS04865 e3d3efa8b340c27ec1e913e275dde045 1102 SUPERFAMILY SSF82693 40 133 3.14E-18 T 19-04-2016 APA12_RS04865 e3d3efa8b340c27ec1e913e275dde045 1102 Gene3D G3DSA:1.10.3850.10 864 1079 2.6E-47 T 19-04-2016 APA12_RS04865 e3d3efa8b340c27ec1e913e275dde045 1102 Pfam PF00873 AcrB/AcrD/AcrF family 3 784 1.6E-211 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS04865 e3d3efa8b340c27ec1e913e275dde045 1102 Pfam PF00873 AcrB/AcrD/AcrF family 837 1078 3.5E-77 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS04865 e3d3efa8b340c27ec1e913e275dde045 1102 SUPERFAMILY SSF82693 564 660 4.19E-12 T 19-04-2016 APA12_RS04865 e3d3efa8b340c27ec1e913e275dde045 1102 Gene3D G3DSA:3.30.70.1430 567 661 2.7E-9 T 19-04-2016 APA12_RS04865 e3d3efa8b340c27ec1e913e275dde045 1102 Gene3D G3DSA:1.20.1640.10 285 493 2.2E-52 T 19-04-2016 APA12_RS04865 e3d3efa8b340c27ec1e913e275dde045 1102 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 5.7E-68 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS04865 e3d3efa8b340c27ec1e913e275dde045 1102 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 5.7E-68 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS04865 e3d3efa8b340c27ec1e913e275dde045 1102 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 5.7E-68 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS04865 e3d3efa8b340c27ec1e913e275dde045 1102 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 5.7E-68 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS04865 e3d3efa8b340c27ec1e913e275dde045 1102 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 5.7E-68 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS04865 e3d3efa8b340c27ec1e913e275dde045 1102 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 5.7E-68 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS04865 e3d3efa8b340c27ec1e913e275dde045 1102 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 5.7E-68 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS04865 e3d3efa8b340c27ec1e913e275dde045 1102 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 5.7E-68 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS04865 e3d3efa8b340c27ec1e913e275dde045 1102 PRINTS PR00702 Acriflavin resistance protein family signature 615 629 5.7E-68 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS04865 e3d3efa8b340c27ec1e913e275dde045 1102 Gene3D G3DSA:3.30.2090.10 713 784 2.7E-8 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APA12_RS04865 e3d3efa8b340c27ec1e913e275dde045 1102 Gene3D G3DSA:3.30.2090.10 183 265 3.0E-14 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APA12_RS04865 e3d3efa8b340c27ec1e913e275dde045 1102 SUPERFAMILY SSF82714 183 266 3.01E-15 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APA12_RS04865 e3d3efa8b340c27ec1e913e275dde045 1102 SUPERFAMILY SSF82693 137 182 3.66E-21 T 19-04-2016 APA12_RS04865 e3d3efa8b340c27ec1e913e275dde045 1102 SUPERFAMILY SSF82693 268 324 3.66E-21 T 19-04-2016 APA12_RS04865 e3d3efa8b340c27ec1e913e275dde045 1102 SUPERFAMILY SSF82866 863 1082 3.79E-40 T 19-04-2016 APA12_RS04865 e3d3efa8b340c27ec1e913e275dde045 1102 Gene3D G3DSA:3.30.70.1430 40 142 3.7E-23 T 19-04-2016 APA12_RS04865 e3d3efa8b340c27ec1e913e275dde045 1102 SUPERFAMILY SSF82714 713 784 1.12E-8 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APA12_RS04865 e3d3efa8b340c27ec1e913e275dde045 1102 PANTHER PTHR32063 1 784 0.0 T 19-04-2016 APA12_RS04865 e3d3efa8b340c27ec1e913e275dde045 1102 PANTHER PTHR32063 845 1091 0.0 T 19-04-2016 APA12_RS04865 e3d3efa8b340c27ec1e913e275dde045 1102 PANTHER PTHR32063:SF34 1 784 0.0 T 19-04-2016 APA12_RS04865 e3d3efa8b340c27ec1e913e275dde045 1102 PANTHER PTHR32063:SF34 845 1091 0.0 T 19-04-2016 APA12_RS04865 e3d3efa8b340c27ec1e913e275dde045 1102 SUPERFAMILY SSF82866 292 489 2.35E-44 T 19-04-2016 APA12_RS06615 68d5686745ac6dd437527ff94d8b5509 720 TIGRFAM TIGR01787 squalene_cyclas: squalene/oxidosqualene cyclases 61 665 2.2E-154 T 19-04-2016 IPR018333 Squalene cyclase GO:0016866 APA12_RS06615 68d5686745ac6dd437527ff94d8b5509 720 TIGRFAM TIGR01507 hopene_cyclase: squalene-hopene cyclase 58 665 8.5E-188 T 19-04-2016 IPR006400 Squalene hopene cyclase GO:0016866|GO:0019746 KEGG: 00030+4.2.1.12|KEGG: 00909+4.2.1.129+5.4.99.17|MetaCyc: PWY-6098|MetaCyc: PWY-7072|UniPathway: UPA00337 APA12_RS06615 68d5686745ac6dd437527ff94d8b5509 720 Gene3D G3DSA:1.50.10.20 355 715 2.0E-109 T 19-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid APA12_RS06615 68d5686745ac6dd437527ff94d8b5509 720 Pfam PF13243 Squalene-hopene cyclase C-terminal domain 366 665 1.5E-119 T 19-04-2016 IPR032696 Squalene cyclase, C-terminal APA12_RS06615 68d5686745ac6dd437527ff94d8b5509 720 Gene3D G3DSA:1.50.10.20 84 354 1.5E-55 T 19-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid APA12_RS06615 68d5686745ac6dd437527ff94d8b5509 720 PANTHER PTHR11764:SF12 67 664 1.6E-223 T 19-04-2016 APA12_RS06615 68d5686745ac6dd437527ff94d8b5509 720 PANTHER PTHR11764:SF12 691 720 1.6E-223 T 19-04-2016 APA12_RS06615 68d5686745ac6dd437527ff94d8b5509 720 Pfam PF13249 Squalene-hopene cyclase N-terminal domain 63 354 2.7E-96 T 19-04-2016 IPR032697 Squalene cyclase, N-terminal APA12_RS06615 68d5686745ac6dd437527ff94d8b5509 720 SUPERFAMILY SSF48239 357 664 2.2E-97 T 19-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid APA12_RS06615 68d5686745ac6dd437527ff94d8b5509 720 SUPERFAMILY SSF48239 86 356 5.02E-67 T 19-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid APA12_RS06615 68d5686745ac6dd437527ff94d8b5509 720 SUPERFAMILY SSF48239 691 715 2.2E-97 T 19-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid APA12_RS06615 68d5686745ac6dd437527ff94d8b5509 720 PANTHER PTHR11764 67 664 1.6E-223 T 19-04-2016 APA12_RS06615 68d5686745ac6dd437527ff94d8b5509 720 PANTHER PTHR11764 691 720 1.6E-223 T 19-04-2016 APA12_RS01550 3eee65e45361e12fcc13ad4038ce29e2 432 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 432 239.058 T 19-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 APA12_RS01550 3eee65e45361e12fcc13ad4038ce29e2 432 Gene3D G3DSA:2.40.50.140 49 117 1.7E-33 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS01550 3eee65e45361e12fcc13ad4038ce29e2 432 Gene3D G3DSA:1.10.720.10 1 46 3.6E-21 T 19-04-2016 APA12_RS01550 3eee65e45361e12fcc13ad4038ce29e2 432 SMART SM00382 184 369 4.4E-7 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS01550 3eee65e45361e12fcc13ad4038ce29e2 432 PANTHER PTHR15184:SF34 19 146 4.2E-185 T 19-04-2016 APA12_RS01550 3eee65e45361e12fcc13ad4038ce29e2 432 PANTHER PTHR15184:SF34 174 432 4.2E-185 T 19-04-2016 APA12_RS01550 3eee65e45361e12fcc13ad4038ce29e2 432 SMART SM00357 52 118 1.4E-13 T 19-04-2016 IPR011129 Cold shock protein GO:0003676 APA12_RS01550 3eee65e45361e12fcc13ad4038ce29e2 432 SUPERFAMILY SSF50249 49 125 5.65E-28 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS01550 3eee65e45361e12fcc13ad4038ce29e2 432 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 5.5E-30 T 19-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 APA12_RS01550 3eee65e45361e12fcc13ad4038ce29e2 432 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 174 377 7.3E-23 T 19-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APA12_RS01550 3eee65e45361e12fcc13ad4038ce29e2 432 Gene3D G3DSA:3.40.50.300 134 431 1.5E-107 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS01550 3eee65e45361e12fcc13ad4038ce29e2 432 SUPERFAMILY SSF52540 91 385 2.86E-66 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS01550 3eee65e45361e12fcc13ad4038ce29e2 432 Pfam PF07498 Rho termination factor, N-terminal domain 5 46 1.5E-16 T 19-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 APA12_RS01550 3eee65e45361e12fcc13ad4038ce29e2 432 SMART SM00959 5 47 3.4E-17 T 19-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 APA12_RS01550 3eee65e45361e12fcc13ad4038ce29e2 432 SUPERFAMILY SSF68912 1 46 7.06E-12 T 19-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 APA12_RS01550 3eee65e45361e12fcc13ad4038ce29e2 432 PANTHER PTHR15184 19 146 4.2E-185 T 19-04-2016 APA12_RS01550 3eee65e45361e12fcc13ad4038ce29e2 432 PANTHER PTHR15184 174 432 4.2E-185 T 19-04-2016 APA12_RS01550 3eee65e45361e12fcc13ad4038ce29e2 432 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 431 9.8E-207 T 19-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 APA12_RS02945 6b3619f1bd98f957f4d788c6f385f143 423 Gene3D G3DSA:1.20.1250.20 238 420 1.1E-5 T 19-04-2016 APA12_RS02945 6b3619f1bd98f957f4d788c6f385f143 423 Pfam PF07690 Major Facilitator Superfamily 25 371 9.9E-15 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APA12_RS02945 6b3619f1bd98f957f4d788c6f385f143 423 SUPERFAMILY SSF103473 20 418 6.15E-34 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS02945 6b3619f1bd98f957f4d788c6f385f143 423 PANTHER PTHR23514 24 178 7.1E-72 T 19-04-2016 APA12_RS02945 6b3619f1bd98f957f4d788c6f385f143 423 PANTHER PTHR23514 195 423 7.1E-72 T 19-04-2016 APA12_RS02945 6b3619f1bd98f957f4d788c6f385f143 423 PANTHER PTHR23514:SF7 24 178 7.1E-72 T 19-04-2016 APA12_RS02945 6b3619f1bd98f957f4d788c6f385f143 423 PANTHER PTHR23514:SF7 195 423 7.1E-72 T 19-04-2016 APA12_RS02945 6b3619f1bd98f957f4d788c6f385f143 423 Gene3D G3DSA:1.20.1250.20 24 224 2.4E-16 T 19-04-2016 APA12_RS02945 6b3619f1bd98f957f4d788c6f385f143 423 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 100 413 1.2E-63 T 19-04-2016 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0009276|GO:0015757|GO:0015758|GO:0016021 APA12_RS10930 cb1b8f30c360d9c58fdd551c17b01e6f 264 PANTHER PTHR37165:SF1 14 264 4.1E-39 T 19-04-2016 APA12_RS10930 cb1b8f30c360d9c58fdd551c17b01e6f 264 PANTHER PTHR37165 14 264 4.1E-39 T 19-04-2016 APA12_RS10930 cb1b8f30c360d9c58fdd551c17b01e6f 264 Pfam PF04454 Encapsulating protein for peroxidase 1 251 7.8E-95 T 19-04-2016 IPR007544 Encapsulating protein for peroxidase GO:0008233|GO:0042742 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APA12_RS10930 cb1b8f30c360d9c58fdd551c17b01e6f 264 PIRSF PIRSF019254 1 264 4.5E-95 T 19-04-2016 IPR007544 Encapsulating protein for peroxidase GO:0008233|GO:0042742 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APA12_RS08175 1c86d62e9457fc00f46cd91058f87537 607 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 607 8.9E-227 T 19-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 APA12_RS08175 1c86d62e9457fc00f46cd91058f87537 607 Gene3D G3DSA:3.60.20.10 2 233 1.3E-71 T 19-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APA12_RS08175 1c86d62e9457fc00f46cd91058f87537 607 Pfam PF13522 Glutamine amidotransferase domain 65 191 7.4E-19 T 19-04-2016 APA12_RS08175 1c86d62e9457fc00f46cd91058f87537 607 SUPERFAMILY SSF56235 2 233 6.78E-71 T 19-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APA12_RS08175 1c86d62e9457fc00f46cd91058f87537 607 Pfam PF01380 SIS domain 287 414 4.5E-27 T 19-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APA12_RS08175 1c86d62e9457fc00f46cd91058f87537 607 Pfam PF01380 SIS domain 461 589 6.1E-22 T 19-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APA12_RS08175 1c86d62e9457fc00f46cd91058f87537 607 PANTHER PTHR10937 1 607 1.0E-280 T 19-04-2016 APA12_RS08175 1c86d62e9457fc00f46cd91058f87537 607 PANTHER PTHR10937:SF0 1 607 1.0E-280 T 19-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 APA12_RS08175 1c86d62e9457fc00f46cd91058f87537 607 Gene3D G3DSA:3.40.50.10490 440 607 1.2E-63 T 19-04-2016 APA12_RS08175 1c86d62e9457fc00f46cd91058f87537 607 Gene3D G3DSA:3.40.50.10490 242 439 7.8E-59 T 19-04-2016 APA12_RS08175 1c86d62e9457fc00f46cd91058f87537 607 SUPERFAMILY SSF53697 245 607 8.53E-98 T 19-04-2016 APA12_RS08175 1c86d62e9457fc00f46cd91058f87537 607 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 607 37.254 T 19-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 APA12_RS00875 6dc57181ebb7978c0f3bf492e5c49477 352 Pfam PF00069 Protein kinase domain 17 247 2.3E-38 T 19-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 APA12_RS00875 6dc57181ebb7978c0f3bf492e5c49477 352 SMART SM00220 17 255 2.0E-36 T 19-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 APA12_RS00875 6dc57181ebb7978c0f3bf492e5c49477 352 Gene3D G3DSA:1.10.510.10 112 250 4.9E-36 T 19-04-2016 APA12_RS00875 6dc57181ebb7978c0f3bf492e5c49477 352 SUPERFAMILY SSF56112 17 249 1.89E-59 T 19-04-2016 IPR011009 Protein kinase-like domain APA12_RS00875 6dc57181ebb7978c0f3bf492e5c49477 352 PANTHER PTHR24362:SF160 17 252 1.4E-52 T 19-04-2016 APA12_RS00875 6dc57181ebb7978c0f3bf492e5c49477 352 Gene3D G3DSA:3.30.200.20 17 111 1.6E-22 T 19-04-2016 APA12_RS00875 6dc57181ebb7978c0f3bf492e5c49477 352 PANTHER PTHR24362 17 252 1.4E-52 T 19-04-2016 APA12_RS00660 bd3cebdaabf6307e6082e97dfd4ff3c8 279 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 9 270 1.4E-102 T 19-04-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 APA12_RS00660 bd3cebdaabf6307e6082e97dfd4ff3c8 279 PANTHER PTHR30406 5 276 1.5E-113 T 19-04-2016 APA12_RS00660 bd3cebdaabf6307e6082e97dfd4ff3c8 279 Gene3D G3DSA:1.10.3720.10 17 268 5.6E-48 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS00660 bd3cebdaabf6307e6082e97dfd4ff3c8 279 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 12 259 1.1E-83 T 19-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 APA12_RS00660 bd3cebdaabf6307e6082e97dfd4ff3c8 279 PANTHER PTHR30406:SF6 5 276 1.5E-113 T 19-04-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 APA12_RS00660 bd3cebdaabf6307e6082e97dfd4ff3c8 279 SUPERFAMILY SSF161098 14 260 7.76E-53 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS00660 bd3cebdaabf6307e6082e97dfd4ff3c8 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 260 1.9E-24 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS13470 e6fafc774d0c207a11cca6800c6648d2 183 Pfam PF06146 Phosphate-starvation-inducible E 82 151 1.5E-16 T 19-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like APA12_RS13475 0ff39c7ba1795d20a88690b74fbc7e7b 232 Pfam PF00043 Glutathione S-transferase, C-terminal domain 146 208 1.1E-7 T 19-04-2016 IPR004046 Glutathione S-transferase, C-terminal APA12_RS13475 0ff39c7ba1795d20a88690b74fbc7e7b 232 SUPERFAMILY SSF47616 82 216 8.21E-20 T 19-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APA12_RS13475 0ff39c7ba1795d20a88690b74fbc7e7b 232 PANTHER PTHR11260 1 221 3.3E-99 T 19-04-2016 APA12_RS13475 0ff39c7ba1795d20a88690b74fbc7e7b 232 Gene3D G3DSA:3.40.30.10 2 91 3.6E-19 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS13475 0ff39c7ba1795d20a88690b74fbc7e7b 232 PANTHER PTHR11260:SF282 1 221 3.3E-99 T 19-04-2016 APA12_RS13475 0ff39c7ba1795d20a88690b74fbc7e7b 232 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 75 5.2E-12 T 19-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APA12_RS13475 0ff39c7ba1795d20a88690b74fbc7e7b 232 SUPERFAMILY SSF52833 1 86 5.95E-18 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS13475 0ff39c7ba1795d20a88690b74fbc7e7b 232 Gene3D G3DSA:1.20.1050.10 92 214 8.4E-22 T 19-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APA12_RS03470 c092b74b3c8c84d66c418fe54b4b8dd6 291 SUPERFAMILY SSF51735 18 274 9.18E-46 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS03470 c092b74b3c8c84d66c418fe54b4b8dd6 291 PANTHER PTHR24322:SF57 180 212 2.5E-21 T 19-04-2016 APA12_RS03470 c092b74b3c8c84d66c418fe54b4b8dd6 291 PANTHER PTHR24322:SF57 27 164 2.5E-21 T 19-04-2016 APA12_RS03470 c092b74b3c8c84d66c418fe54b4b8dd6 291 Gene3D G3DSA:3.40.50.720 11 228 2.5E-40 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS03470 c092b74b3c8c84d66c418fe54b4b8dd6 291 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 167 195 - T 19-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APA12_RS03470 c092b74b3c8c84d66c418fe54b4b8dd6 291 Pfam PF00106 short chain dehydrogenase 24 220 3.5E-33 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS03470 c092b74b3c8c84d66c418fe54b4b8dd6 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 170 7.6E-15 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS03470 c092b74b3c8c84d66c418fe54b4b8dd6 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 94 105 7.6E-15 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS03470 c092b74b3c8c84d66c418fe54b4b8dd6 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 218 7.6E-15 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS03470 c092b74b3c8c84d66c418fe54b4b8dd6 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 199 7.6E-15 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS03470 c092b74b3c8c84d66c418fe54b4b8dd6 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 24 41 7.6E-15 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS03470 c092b74b3c8c84d66c418fe54b4b8dd6 291 PANTHER PTHR24322 180 212 2.5E-21 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS03470 c092b74b3c8c84d66c418fe54b4b8dd6 291 PANTHER PTHR24322 27 164 2.5E-21 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS03040 1694755c86c72c7777d96b9d507a8e52 334 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 19 194 1.9E-60 T 19-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain APA12_RS03040 1694755c86c72c7777d96b9d507a8e52 334 SUPERFAMILY SSF52540 17 233 1.54E-44 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS03040 1694755c86c72c7777d96b9d507a8e52 334 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 238 332 3.9E-24 T 19-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal APA12_RS03040 1694755c86c72c7777d96b9d507a8e52 334 PANTHER PTHR13748 15 334 4.5E-145 T 19-04-2016 APA12_RS03040 1694755c86c72c7777d96b9d507a8e52 334 Gene3D G3DSA:3.30.1220.10 227 333 2.5E-39 T 19-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal APA12_RS03040 1694755c86c72c7777d96b9d507a8e52 334 SUPERFAMILY SSF90002 238 332 5.23E-27 T 19-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal APA12_RS03040 1694755c86c72c7777d96b9d507a8e52 334 SMART SM00833 238 332 1.5E-20 T 19-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal APA12_RS03040 1694755c86c72c7777d96b9d507a8e52 334 Gene3D G3DSA:3.40.50.300 17 214 1.7E-81 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS03040 1694755c86c72c7777d96b9d507a8e52 334 PANTHER PTHR13748:SF43 15 334 4.5E-145 T 19-04-2016 APA12_RS06135 1d859ad8503a68695b3d37d81e4508d9 472 PANTHER PTHR22912 3 120 2.6E-193 T 19-04-2016 APA12_RS06135 1d859ad8503a68695b3d37d81e4508d9 472 PANTHER PTHR22912 140 465 2.6E-193 T 19-04-2016 APA12_RS06135 1d859ad8503a68695b3d37d81e4508d9 472 Gene3D G3DSA:3.30.390.30 340 469 3.6E-47 T 19-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APA12_RS06135 1d859ad8503a68695b3d37d81e4508d9 472 SUPERFAMILY SSF51905 2 342 2.19E-63 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS06135 1d859ad8503a68695b3d37d81e4508d9 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 436 456 2.4E-64 T 19-04-2016 APA12_RS06135 1d859ad8503a68695b3d37d81e4508d9 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 414 429 2.4E-64 T 19-04-2016 APA12_RS06135 1d859ad8503a68695b3d37d81e4508d9 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 183 208 2.4E-64 T 19-04-2016 APA12_RS06135 1d859ad8503a68695b3d37d81e4508d9 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 2.4E-64 T 19-04-2016 APA12_RS06135 1d859ad8503a68695b3d37d81e4508d9 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 285 2.4E-64 T 19-04-2016 APA12_RS06135 1d859ad8503a68695b3d37d81e4508d9 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.4E-64 T 19-04-2016 APA12_RS06135 1d859ad8503a68695b3d37d81e4508d9 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 349 370 2.4E-64 T 19-04-2016 APA12_RS06135 1d859ad8503a68695b3d37d81e4508d9 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 154 2.4E-64 T 19-04-2016 APA12_RS06135 1d859ad8503a68695b3d37d81e4508d9 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 313 320 2.4E-64 T 19-04-2016 APA12_RS06135 1d859ad8503a68695b3d37d81e4508d9 472 Gene3D G3DSA:3.50.50.60 149 339 3.0E-49 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS06135 1d859ad8503a68695b3d37d81e4508d9 472 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 353 461 4.7E-37 T 19-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APA12_RS06135 1d859ad8503a68695b3d37d81e4508d9 472 PIRSF PIRSF000350 1 466 9.3E-82 T 19-04-2016 APA12_RS06135 1d859ad8503a68695b3d37d81e4508d9 472 PANTHER PTHR22912:SF125 3 120 2.6E-193 T 19-04-2016 APA12_RS06135 1d859ad8503a68695b3d37d81e4508d9 472 PANTHER PTHR22912:SF125 140 465 2.6E-193 T 19-04-2016 APA12_RS06135 1d859ad8503a68695b3d37d81e4508d9 472 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 19-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 APA12_RS06135 1d859ad8503a68695b3d37d81e4508d9 472 Gene3D G3DSA:3.50.50.60 3 148 1.1E-40 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS06135 1d859ad8503a68695b3d37d81e4508d9 472 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 6 471 5.8E-165 T 19-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 APA12_RS06135 1d859ad8503a68695b3d37d81e4508d9 472 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 333 2.8E-62 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS06135 1d859ad8503a68695b3d37d81e4508d9 472 SUPERFAMILY SSF55424 352 471 1.89E-39 T 19-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 APA12_RS06135 1d859ad8503a68695b3d37d81e4508d9 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.0E-34 T 19-04-2016 APA12_RS06135 1d859ad8503a68695b3d37d81e4508d9 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 286 1.0E-34 T 19-04-2016 APA12_RS06135 1d859ad8503a68695b3d37d81e4508d9 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 298 320 1.0E-34 T 19-04-2016 APA12_RS06135 1d859ad8503a68695b3d37d81e4508d9 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 142 160 1.0E-34 T 19-04-2016 APA12_RS06135 1d859ad8503a68695b3d37d81e4508d9 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 183 201 1.0E-34 T 19-04-2016 APA12_RS11060 1449e24fe64fdd016b4a1e6b4763dafa 240 PANTHER PTHR30456 3 240 5.5E-124 T 19-04-2016 APA12_RS11060 1449e24fe64fdd016b4a1e6b4763dafa 240 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 233 3.7E-98 T 19-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 APA12_RS11060 1449e24fe64fdd016b4a1e6b4763dafa 240 PANTHER PTHR30456:SF0 3 240 5.5E-124 T 19-04-2016 APA12_RS11060 1449e24fe64fdd016b4a1e6b4763dafa 240 SUPERFAMILY SSF63892 5 236 1.96E-94 T 19-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 APA12_RS11060 1449e24fe64fdd016b4a1e6b4763dafa 240 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 239 119.835 T 19-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 APA12_RS11060 1449e24fe64fdd016b4a1e6b4763dafa 240 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 235 6.0E-87 T 19-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 APA12_RS11060 1449e24fe64fdd016b4a1e6b4763dafa 240 Gene3D G3DSA:3.20.20.70 4 236 2.8E-102 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS01480 e1d9d75d1bd6a7628dd5ad88ef2d7ca8 245 Pfam PF02390 Putative methyltransferase 69 235 7.7E-30 T 19-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 APA12_RS01480 e1d9d75d1bd6a7628dd5ad88ef2d7ca8 245 PANTHER PTHR23417 53 245 2.4E-28 T 19-04-2016 APA12_RS01480 e1d9d75d1bd6a7628dd5ad88ef2d7ca8 245 PANTHER PTHR23417:SF14 53 245 2.4E-28 T 19-04-2016 APA12_RS01480 e1d9d75d1bd6a7628dd5ad88ef2d7ca8 245 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 27 245 25.233 T 19-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 APA12_RS01480 e1d9d75d1bd6a7628dd5ad88ef2d7ca8 245 SUPERFAMILY SSF53335 52 243 3.45E-19 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS03155 0aaab6bb284ff365e3152eaad66b26ef 338 Hamap MF_01685 Ferredoxin--NADP reductase. 7 334 40.229 T 19-04-2016 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101|MetaCyc: PWY-7230 APA12_RS03155 0aaab6bb284ff365e3152eaad66b26ef 338 PANTHER PTHR22912 1 312 9.2E-84 T 19-04-2016 APA12_RS03155 0aaab6bb284ff365e3152eaad66b26ef 338 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 153 177 6.3E-26 T 19-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APA12_RS03155 0aaab6bb284ff365e3152eaad66b26ef 338 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 113 121 6.3E-26 T 19-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APA12_RS03155 0aaab6bb284ff365e3152eaad66b26ef 338 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 66 76 6.3E-26 T 19-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APA12_RS03155 0aaab6bb284ff365e3152eaad66b26ef 338 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 281 299 6.3E-26 T 19-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APA12_RS03155 0aaab6bb284ff365e3152eaad66b26ef 338 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 9 31 6.3E-26 T 19-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APA12_RS03155 0aaab6bb284ff365e3152eaad66b26ef 338 PANTHER PTHR22912:SF158 1 312 9.2E-84 T 19-04-2016 APA12_RS03155 0aaab6bb284ff365e3152eaad66b26ef 338 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 3.2E-21 T 19-04-2016 APA12_RS03155 0aaab6bb284ff365e3152eaad66b26ef 338 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 271 293 3.2E-21 T 19-04-2016 APA12_RS03155 0aaab6bb284ff365e3152eaad66b26ef 338 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 157 175 3.2E-21 T 19-04-2016 APA12_RS03155 0aaab6bb284ff365e3152eaad66b26ef 338 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 112 130 3.2E-21 T 19-04-2016 APA12_RS03155 0aaab6bb284ff365e3152eaad66b26ef 338 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 298 8.7E-28 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS03155 0aaab6bb284ff365e3152eaad66b26ef 338 Gene3D G3DSA:3.50.50.60 129 247 1.7E-19 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS03155 0aaab6bb284ff365e3152eaad66b26ef 338 Gene3D G3DSA:3.50.50.60 252 321 2.0E-45 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS03155 0aaab6bb284ff365e3152eaad66b26ef 338 Gene3D G3DSA:3.50.50.60 7 127 2.0E-45 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS03155 0aaab6bb284ff365e3152eaad66b26ef 338 SUPERFAMILY SSF51905 8 316 2.33E-42 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS13505 78d9095b986bf7d0f9eb0a06862b19ba 443 SUPERFAMILY SSF116878 128 227 8.89E-43 T 19-04-2016 APA12_RS13505 78d9095b986bf7d0f9eb0a06862b19ba 443 SUPERFAMILY SSF116878 372 443 8.89E-43 T 19-04-2016 APA12_RS13505 78d9095b986bf7d0f9eb0a06862b19ba 443 Pfam PF01926 50S ribosome-binding GTPase 226 314 1.2E-18 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 APA12_RS13505 78d9095b986bf7d0f9eb0a06862b19ba 443 Gene3D G3DSA:3.30.1360.120 6 128 7.6E-41 T 19-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 APA12_RS13505 78d9095b986bf7d0f9eb0a06862b19ba 443 Gene3D G3DSA:3.40.50.300 200 253 1.7E-7 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS13505 78d9095b986bf7d0f9eb0a06862b19ba 443 Gene3D G3DSA:1.20.120.430 377 443 1.8E-47 T 19-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 APA12_RS13505 78d9095b986bf7d0f9eb0a06862b19ba 443 Gene3D G3DSA:1.20.120.430 254 278 1.8E-47 T 19-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 APA12_RS13505 78d9095b986bf7d0f9eb0a06862b19ba 443 Gene3D G3DSA:1.20.120.430 129 189 1.8E-47 T 19-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 APA12_RS13505 78d9095b986bf7d0f9eb0a06862b19ba 443 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 19 443 3.3E-82 T 19-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 APA12_RS13505 78d9095b986bf7d0f9eb0a06862b19ba 443 SUPERFAMILY SSF52540 195 362 1.43E-37 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS13505 78d9095b986bf7d0f9eb0a06862b19ba 443 SUPERFAMILY SSF52540 80 159 1.43E-37 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS13505 78d9095b986bf7d0f9eb0a06862b19ba 443 PANTHER PTHR11649 13 443 3.3E-152 T 19-04-2016 APA12_RS13505 78d9095b986bf7d0f9eb0a06862b19ba 443 Pfam PF12631 MnmE helical domain 130 440 3.3E-51 T 19-04-2016 IPR025867 MnmE, helical domain APA12_RS13505 78d9095b986bf7d0f9eb0a06862b19ba 443 PANTHER PTHR11649:SF56 13 443 3.3E-152 T 19-04-2016 APA12_RS13505 78d9095b986bf7d0f9eb0a06862b19ba 443 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 227 315 1.4E-14 T 19-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APA12_RS13505 78d9095b986bf7d0f9eb0a06862b19ba 443 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 10 443 29.663 T 19-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 APA12_RS13505 78d9095b986bf7d0f9eb0a06862b19ba 443 Pfam PF10396 GTP-binding protein TrmE N-terminus 11 127 2.4E-36 T 19-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal APA12_RS01415 e0751f12802b09a5594c575f20cdc297 781 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 747 0.0 T 19-04-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 APA12_RS01415 e0751f12802b09a5594c575f20cdc297 781 PANTHER PTHR11638 162 776 0.0 T 19-04-2016 APA12_RS01415 e0751f12802b09a5594c575f20cdc297 781 PANTHER PTHR11638 1 138 0.0 T 19-04-2016 APA12_RS01415 e0751f12802b09a5594c575f20cdc297 781 PANTHER PTHR11638:SF111 162 776 0.0 T 19-04-2016 APA12_RS01415 e0751f12802b09a5594c575f20cdc297 781 PANTHER PTHR11638:SF111 1 138 0.0 T 19-04-2016 APA12_RS01415 e0751f12802b09a5594c575f20cdc297 781 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 315 327 - T 19-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 APA12_RS01415 e0751f12802b09a5594c575f20cdc297 781 SUPERFAMILY SSF81923 1 141 7.06E-56 T 19-04-2016 IPR004176 Clp, N-terminal GO:0019538 APA12_RS01415 e0751f12802b09a5594c575f20cdc297 781 Gene3D G3DSA:3.40.50.300 183 363 2.7E-43 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS01415 e0751f12802b09a5594c575f20cdc297 781 Gene3D G3DSA:1.10.1780.10 1 141 4.0E-37 T 19-04-2016 IPR004176 Clp, N-terminal GO:0019538 APA12_RS01415 e0751f12802b09a5594c575f20cdc297 781 SMART SM00382 500 663 5.9E-11 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS01415 e0751f12802b09a5594c575f20cdc297 781 SMART SM00382 219 365 4.0E-8 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS01415 e0751f12802b09a5594c575f20cdc297 781 Gene3D G3DSA:1.10.8.60 365 447 2.1E-29 T 19-04-2016 APA12_RS01415 e0751f12802b09a5594c575f20cdc297 781 SMART SM01086 666 755 2.0E-36 T 19-04-2016 IPR019489 Clp ATPase, C-terminal APA12_RS01415 e0751f12802b09a5594c575f20cdc297 781 Gene3D G3DSA:3.40.50.300 455 677 1.1E-54 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS01415 e0751f12802b09a5594c575f20cdc297 781 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 16 60 2.2E-10 T 19-04-2016 IPR004176 Clp, N-terminal GO:0019538 APA12_RS01415 e0751f12802b09a5594c575f20cdc297 781 SUPERFAMILY SSF52540 450 740 3.61E-76 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS01415 e0751f12802b09a5594c575f20cdc297 781 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 224 355 7.0E-12 T 19-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APA12_RS01415 e0751f12802b09a5594c575f20cdc297 781 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 531 549 - T 19-04-2016 IPR028299 ClpA/B, conserved site 2 APA12_RS01415 e0751f12802b09a5594c575f20cdc297 781 Gene3D G3DSA:1.10.8.60 678 764 1.0E-30 T 19-04-2016 APA12_RS01415 e0751f12802b09a5594c575f20cdc297 781 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 608 622 2.7E-36 T 19-04-2016 IPR001270 ClpA/B family GO:0005524 APA12_RS01415 e0751f12802b09a5594c575f20cdc297 781 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 504 522 2.7E-36 T 19-04-2016 IPR001270 ClpA/B family GO:0005524 APA12_RS01415 e0751f12802b09a5594c575f20cdc297 781 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 546 564 2.7E-36 T 19-04-2016 IPR001270 ClpA/B family GO:0005524 APA12_RS01415 e0751f12802b09a5594c575f20cdc297 781 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 575 593 2.7E-36 T 19-04-2016 IPR001270 ClpA/B family GO:0005524 APA12_RS01415 e0751f12802b09a5594c575f20cdc297 781 Pfam PF07724 AAA domain (Cdc48 subfamily) 499 660 3.3E-46 T 19-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APA12_RS01415 e0751f12802b09a5594c575f20cdc297 781 SUPERFAMILY SSF52540 180 434 5.82E-67 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS01415 e0751f12802b09a5594c575f20cdc297 781 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 666 746 1.7E-23 T 19-04-2016 IPR019489 Clp ATPase, C-terminal APA12_RS06795 c1c2594a37a2d998a9699f8338b7211c 153 PANTHER PTHR30411 3 153 2.8E-53 T 19-04-2016 APA12_RS06795 c1c2594a37a2d998a9699f8338b7211c 153 Gene3D G3DSA:3.90.960.10 1 152 1.7E-46 T 19-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APA12_RS06795 c1c2594a37a2d998a9699f8338b7211c 153 Pfam PF04073 Aminoacyl-tRNA editing domain 25 141 6.5E-29 T 19-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APA12_RS06795 c1c2594a37a2d998a9699f8338b7211c 153 PANTHER PTHR30411:SF6 3 153 2.8E-53 T 19-04-2016 APA12_RS06795 c1c2594a37a2d998a9699f8338b7211c 153 SUPERFAMILY SSF55826 4 150 3.27E-39 T 19-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APA12_RS03635 26be137b4f984c8489773eb1312c9f62 494 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 174 480 5.0E-118 T 19-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 APA12_RS03635 26be137b4f984c8489773eb1312c9f62 494 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 23 133 1.8E-18 T 19-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 APA12_RS03635 26be137b4f984c8489773eb1312c9f62 494 PANTHER PTHR11963 23 486 7.7E-182 T 19-04-2016 APA12_RS03635 26be137b4f984c8489773eb1312c9f62 494 PRINTS PR00481 Cytosol aminopeptidase signature 272 293 5.8E-51 T 19-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APA12_RS03635 26be137b4f984c8489773eb1312c9f62 494 PRINTS PR00481 Cytosol aminopeptidase signature 331 351 5.8E-51 T 19-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APA12_RS03635 26be137b4f984c8489773eb1312c9f62 494 PRINTS PR00481 Cytosol aminopeptidase signature 309 330 5.8E-51 T 19-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APA12_RS03635 26be137b4f984c8489773eb1312c9f62 494 PRINTS PR00481 Cytosol aminopeptidase signature 250 267 5.8E-51 T 19-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APA12_RS03635 26be137b4f984c8489773eb1312c9f62 494 PRINTS PR00481 Cytosol aminopeptidase signature 360 375 5.8E-51 T 19-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APA12_RS03635 26be137b4f984c8489773eb1312c9f62 494 SUPERFAMILY SSF53187 169 486 5.02E-118 T 19-04-2016 APA12_RS03635 26be137b4f984c8489773eb1312c9f62 494 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 335 342 - T 19-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 APA12_RS03635 26be137b4f984c8489773eb1312c9f62 494 PANTHER PTHR11963:SF13 23 486 7.7E-182 T 19-04-2016 APA12_RS03635 26be137b4f984c8489773eb1312c9f62 494 Gene3D G3DSA:3.40.630.10 159 487 4.8E-132 T 19-04-2016 APA12_RS03635 26be137b4f984c8489773eb1312c9f62 494 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 2 489 35.064 T 19-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 APA12_RS03635 26be137b4f984c8489773eb1312c9f62 494 Gene3D G3DSA:3.40.220.10 3 148 1.2E-26 T 19-04-2016 APA12_RS03635 26be137b4f984c8489773eb1312c9f62 494 SUPERFAMILY SSF52949 4 172 6.47E-21 T 19-04-2016 APA12_RS09405 1cea210bd8d1aa025df61b36b4e2a00f 339 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 8 105 1.2E-14 T 19-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 APA12_RS09405 1cea210bd8d1aa025df61b36b4e2a00f 339 Gene3D G3DSA:3.40.430.10 121 295 1.1E-19 T 19-04-2016 IPR024072 Dihydrofolate reductase-like domain APA12_RS09405 1cea210bd8d1aa025df61b36b4e2a00f 339 SUPERFAMILY SSF53927 10 132 4.18E-28 T 19-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 APA12_RS09405 1cea210bd8d1aa025df61b36b4e2a00f 339 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 10 295 2.9E-54 T 19-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 APA12_RS09405 1cea210bd8d1aa025df61b36b4e2a00f 339 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 94 - T 19-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 APA12_RS09405 1cea210bd8d1aa025df61b36b4e2a00f 339 PANTHER PTHR11079:SF10 3 234 3.3E-25 T 19-04-2016 APA12_RS09405 1cea210bd8d1aa025df61b36b4e2a00f 339 Pfam PF01872 RibD C-terminal domain 172 294 1.2E-7 T 19-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 APA12_RS09405 1cea210bd8d1aa025df61b36b4e2a00f 339 Gene3D G3DSA:3.40.140.10 10 116 2.5E-14 T 19-04-2016 APA12_RS09405 1cea210bd8d1aa025df61b36b4e2a00f 339 PANTHER PTHR11079 3 234 3.3E-25 T 19-04-2016 APA12_RS09405 1cea210bd8d1aa025df61b36b4e2a00f 339 SUPERFAMILY SSF53597 157 297 2.63E-17 T 19-04-2016 IPR024072 Dihydrofolate reductase-like domain APA12_RS11790 148a1b538a99a6187e7c87cfb1a8901a 232 PIRSF PIRSF004848 7 232 9.3E-61 T 19-04-2016 IPR011078 Uncharacterised protein family UPF0001 APA12_RS11790 148a1b538a99a6187e7c87cfb1a8901a 232 SUPERFAMILY SSF51419 12 226 1.02E-68 T 19-04-2016 IPR029066 PLP-binding barrel APA12_RS11790 148a1b538a99a6187e7c87cfb1a8901a 232 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 15 228 9.9E-47 T 19-04-2016 IPR011078 Uncharacterised protein family UPF0001 APA12_RS11790 148a1b538a99a6187e7c87cfb1a8901a 232 Gene3D G3DSA:3.20.20.10 9 230 1.3E-77 T 19-04-2016 IPR029066 PLP-binding barrel APA12_RS11790 148a1b538a99a6187e7c87cfb1a8901a 232 PANTHER PTHR10146 12 231 6.0E-80 T 19-04-2016 IPR011078 Uncharacterised protein family UPF0001 APA12_RS11790 148a1b538a99a6187e7c87cfb1a8901a 232 Pfam PF01168 Alanine racemase, N-terminal domain 16 229 9.0E-26 T 19-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APA12_RS01970 7ce5f1fd361be0e3898dacb72f529bf4 295 Pfam PF04794 YdjC-like protein 5 268 4.6E-55 T 19-04-2016 IPR006879 Chitooligosaccharide deacetylase ChbG-like APA12_RS01970 7ce5f1fd361be0e3898dacb72f529bf4 295 SUPERFAMILY SSF88713 1 280 5.56E-67 T 19-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 APA12_RS01970 7ce5f1fd361be0e3898dacb72f529bf4 295 Gene3D G3DSA:3.20.20.370 1 281 4.1E-70 T 19-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 APA12_RS01970 7ce5f1fd361be0e3898dacb72f529bf4 295 TIGRFAM TIGR03473 HpnK: hopanoid biosynthesis associated protein HpnK 1 280 4.0E-113 T 19-04-2016 IPR017836 Hopanoid biosynthesis associated protein HpnK APA12_RS01970 7ce5f1fd361be0e3898dacb72f529bf4 295 PANTHER PTHR31609 1 293 2.8E-42 T 19-04-2016 APA12_RS00530 332ded97085b1080e8dd316f2c95f595 454 Gene3D G3DSA:3.20.20.140 79 415 6.0E-96 T 19-04-2016 APA12_RS00530 332ded97085b1080e8dd316f2c95f595 454 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 30 433 5.9E-91 T 19-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 APA12_RS00530 332ded97085b1080e8dd316f2c95f595 454 ProSitePatterns PS00483 Dihydroorotase signature 2. 311 322 - T 19-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 APA12_RS00530 332ded97085b1080e8dd316f2c95f595 454 SUPERFAMILY SSF51556 65 376 1.61E-89 T 19-04-2016 IPR032466 Metal-dependent hydrolase APA12_RS00530 332ded97085b1080e8dd316f2c95f595 454 Gene3D G3DSA:2.30.40.10 16 78 2.7E-19 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APA12_RS00530 332ded97085b1080e8dd316f2c95f595 454 Pfam PF01979 Amidohydrolase family 61 429 3.6E-26 T 19-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APA12_RS00530 332ded97085b1080e8dd316f2c95f595 454 PANTHER PTHR11647:SF1 16 443 2.3E-127 T 19-04-2016 APA12_RS00530 332ded97085b1080e8dd316f2c95f595 454 SUPERFAMILY SSF51338 375 437 9.37E-32 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APA12_RS00530 332ded97085b1080e8dd316f2c95f595 454 SUPERFAMILY SSF51338 15 64 9.37E-32 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APA12_RS00530 332ded97085b1080e8dd316f2c95f595 454 PANTHER PTHR11647 16 443 2.3E-127 T 19-04-2016 APA12_RS06095 d2252054517adf129bda20d3a91eb796 449 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 2 441 3.7E-148 T 19-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 APA12_RS06095 d2252054517adf129bda20d3a91eb796 449 SUPERFAMILY SSF48557 3 441 5.03E-124 T 19-04-2016 IPR008948 L-Aspartase-like GO:0003824 APA12_RS06095 d2252054517adf129bda20d3a91eb796 449 SMART SM00998 357 442 1.0E-30 T 19-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 APA12_RS06095 d2252054517adf129bda20d3a91eb796 449 Pfam PF00206 Lyase 7 292 4.3E-53 T 19-04-2016 IPR022761 Fumarate lyase, N-terminal APA12_RS06095 d2252054517adf129bda20d3a91eb796 449 PRINTS PR00145 Argininosuccinate lyase family signature 136 156 5.2E-5 T 19-04-2016 APA12_RS06095 d2252054517adf129bda20d3a91eb796 449 PRINTS PR00145 Argininosuccinate lyase family signature 269 285 5.2E-5 T 19-04-2016 APA12_RS06095 d2252054517adf129bda20d3a91eb796 449 PRINTS PR00145 Argininosuccinate lyase family signature 224 248 5.2E-5 T 19-04-2016 APA12_RS06095 d2252054517adf129bda20d3a91eb796 449 PANTHER PTHR11444:SF2 4 435 2.4E-140 T 19-04-2016 APA12_RS06095 d2252054517adf129bda20d3a91eb796 449 Gene3D G3DSA:1.20.200.10 99 364 5.1E-83 T 19-04-2016 APA12_RS06095 d2252054517adf129bda20d3a91eb796 449 ProSitePatterns PS00163 Fumarate lyases signature. 269 278 - T 19-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 APA12_RS06095 d2252054517adf129bda20d3a91eb796 449 Pfam PF10397 Adenylosuccinate lyase C-terminus 358 440 5.4E-22 T 19-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 APA12_RS06095 d2252054517adf129bda20d3a91eb796 449 Gene3D G3DSA:1.10.275.10 3 98 2.4E-31 T 19-04-2016 IPR024083 Fumarase/histidase, N-terminal APA12_RS06095 d2252054517adf129bda20d3a91eb796 449 PANTHER PTHR11444 4 435 2.4E-140 T 19-04-2016 IPR000362 Fumarate lyase family APA12_RS06095 d2252054517adf129bda20d3a91eb796 449 PRINTS PR00149 Fumarate lyase superfamily signature 224 251 4.7E-23 T 19-04-2016 IPR000362 Fumarate lyase family APA12_RS06095 d2252054517adf129bda20d3a91eb796 449 PRINTS PR00149 Fumarate lyase superfamily signature 269 285 4.7E-23 T 19-04-2016 IPR000362 Fumarate lyase family APA12_RS06095 d2252054517adf129bda20d3a91eb796 449 PRINTS PR00149 Fumarate lyase superfamily signature 141 159 4.7E-23 T 19-04-2016 IPR000362 Fumarate lyase family APA12_RS06095 d2252054517adf129bda20d3a91eb796 449 PRINTS PR00149 Fumarate lyase superfamily signature 96 114 4.7E-23 T 19-04-2016 IPR000362 Fumarate lyase family APA12_RS06095 d2252054517adf129bda20d3a91eb796 449 Gene3D G3DSA:1.10.40.30 365 442 2.2E-25 T 19-04-2016 APA12_RS05200 af93b6425c9ccca390ca75beecbb0324 66 Pfam PF01632 Ribosomal protein L35 2 60 6.6E-18 T 19-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS05200 af93b6425c9ccca390ca75beecbb0324 66 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 15.154 T 19-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APA12_RS05200 af93b6425c9ccca390ca75beecbb0324 66 PRINTS PR00064 Ribosomal protein L35 signature 21 35 3.9E-10 T 19-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APA12_RS05200 af93b6425c9ccca390ca75beecbb0324 66 PRINTS PR00064 Ribosomal protein L35 signature 3 20 3.9E-10 T 19-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APA12_RS05200 af93b6425c9ccca390ca75beecbb0324 66 PRINTS PR00064 Ribosomal protein L35 signature 36 54 3.9E-10 T 19-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APA12_RS05200 af93b6425c9ccca390ca75beecbb0324 66 PANTHER PTHR33343 1 66 8.1E-14 T 19-04-2016 APA12_RS05200 af93b6425c9ccca390ca75beecbb0324 66 SUPERFAMILY SSF143034 2 64 2.62E-19 T 19-04-2016 APA12_RS05200 af93b6425c9ccca390ca75beecbb0324 66 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 19-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS05200 af93b6425c9ccca390ca75beecbb0324 66 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 62 7.8E-19 T 19-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APA12_RS08710 3c939f23e4ca573c0b3f2f39dac4b2c1 255 Gene3D G3DSA:1.10.3580.10 82 247 1.8E-44 T 19-04-2016 IPR023335 Orthogonal Bundle domain in ATP12 APA12_RS08710 3c939f23e4ca573c0b3f2f39dac4b2c1 255 Pfam PF07542 ATP12 chaperone protein 19 141 6.2E-30 T 19-04-2016 IPR011419 ATP12, ATPase F1F0-assembly protein GO:0043461 APA12_RS08710 3c939f23e4ca573c0b3f2f39dac4b2c1 255 SUPERFAMILY SSF160909 15 247 8.63E-65 T 19-04-2016 APA12_RS08710 3c939f23e4ca573c0b3f2f39dac4b2c1 255 Gene3D G3DSA:3.30.2180.10 12 69 4.0E-19 T 19-04-2016 APA12_RS08710 3c939f23e4ca573c0b3f2f39dac4b2c1 255 PANTHER PTHR21013 12 225 7.1E-48 T 19-04-2016 IPR011419 ATP12, ATPase F1F0-assembly protein GO:0043461 APA12_RS01395 4263d4bd38ea5ddc241198122239ec14 606 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 472 487 5.8E-68 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APA12_RS01395 4263d4bd38ea5ddc241198122239ec14 606 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 431 449 5.8E-68 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APA12_RS01395 4263d4bd38ea5ddc241198122239ec14 606 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 88 113 5.8E-68 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APA12_RS01395 4263d4bd38ea5ddc241198122239ec14 606 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 180 199 5.8E-68 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APA12_RS01395 4263d4bd38ea5ddc241198122239ec14 606 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 279 295 5.8E-68 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APA12_RS01395 4263d4bd38ea5ddc241198122239ec14 606 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 407 425 5.8E-68 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APA12_RS01395 4263d4bd38ea5ddc241198122239ec14 606 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 309 328 5.8E-68 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APA12_RS01395 4263d4bd38ea5ddc241198122239ec14 606 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 162 180 5.8E-68 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APA12_RS01395 4263d4bd38ea5ddc241198122239ec14 606 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 496 513 5.8E-68 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APA12_RS01395 4263d4bd38ea5ddc241198122239ec14 606 PANTHER PTHR11686 45 605 2.3E-194 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APA12_RS01395 4263d4bd38ea5ddc241198122239ec14 606 SUPERFAMILY SSF56235 59 603 5.02E-171 T 19-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APA12_RS01395 4263d4bd38ea5ddc241198122239ec14 606 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 66 562 7.0E-152 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APA12_RS01395 4263d4bd38ea5ddc241198122239ec14 606 Pfam PF01019 Gamma-glutamyltranspeptidase 81 569 3.0E-168 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APA12_RS01395 4263d4bd38ea5ddc241198122239ec14 606 PANTHER PTHR11686:SF9 45 605 2.3E-194 T 19-04-2016 APA12_RS04155 82601f87ea15e76f5ca9fcac9c06b2d1 188 SMART SM00857 2 141 5.9E-56 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APA12_RS04155 82601f87ea15e76f5ca9fcac9c06b2d1 188 PANTHER PTHR30461 2 183 3.1E-61 T 19-04-2016 APA12_RS04155 82601f87ea15e76f5ca9fcac9c06b2d1 188 SUPERFAMILY SSF53041 1 141 8.24E-42 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APA12_RS04155 82601f87ea15e76f5ca9fcac9c06b2d1 188 Pfam PF00239 Resolvase, N terminal domain 3 141 1.3E-42 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APA12_RS04155 82601f87ea15e76f5ca9fcac9c06b2d1 188 Gene3D G3DSA:3.40.50.1390 1 124 3.6E-40 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APA12_RS04155 82601f87ea15e76f5ca9fcac9c06b2d1 188 Pfam PF02796 Helix-turn-helix domain of resolvase 143 182 2.0E-8 T 19-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 APA12_RS04155 82601f87ea15e76f5ca9fcac9c06b2d1 188 Gene3D G3DSA:1.10.10.60 141 183 3.5E-13 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS04155 82601f87ea15e76f5ca9fcac9c06b2d1 188 PANTHER PTHR30461:SF9 2 183 3.1E-61 T 19-04-2016 APA12_RS04155 82601f87ea15e76f5ca9fcac9c06b2d1 188 SUPERFAMILY SSF46689 143 184 6.0E-5 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS08535 76a86fc177151960b6638ba3160aadc3 231 SUPERFAMILY SSF53335 30 205 3.38E-34 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS08535 76a86fc177151960b6638ba3160aadc3 231 Pfam PF08241 Methyltransferase domain 69 165 4.4E-22 T 19-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 APA12_RS08535 76a86fc177151960b6638ba3160aadc3 231 PANTHER PTHR10108 34 166 2.0E-29 T 19-04-2016 APA12_RS08535 76a86fc177151960b6638ba3160aadc3 231 Gene3D G3DSA:3.40.50.150 29 169 5.5E-33 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS05905 8995d134ab3b94ec1158fb704a6f2c27 275 SUPERFAMILY SSF56655 20 270 9.95E-66 T 19-04-2016 APA12_RS05905 8995d134ab3b94ec1158fb704a6f2c27 275 PANTHER PTHR20854:SF4 13 271 6.1E-63 T 19-04-2016 APA12_RS05905 8995d134ab3b94ec1158fb704a6f2c27 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 221 245 5.8E-28 T 19-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APA12_RS05905 8995d134ab3b94ec1158fb704a6f2c27 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 145 168 5.8E-28 T 19-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APA12_RS05905 8995d134ab3b94ec1158fb704a6f2c27 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 77 93 5.8E-28 T 19-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APA12_RS05905 8995d134ab3b94ec1158fb704a6f2c27 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 55 75 5.8E-28 T 19-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APA12_RS05905 8995d134ab3b94ec1158fb704a6f2c27 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 190 211 5.8E-28 T 19-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APA12_RS05905 8995d134ab3b94ec1158fb704a6f2c27 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 96 112 5.8E-28 T 19-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APA12_RS05905 8995d134ab3b94ec1158fb704a6f2c27 275 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 96 109 - T 19-04-2016 IPR020583 Inositol monophosphatase, metal-binding site APA12_RS05905 8995d134ab3b94ec1158fb704a6f2c27 275 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 224 238 - T 19-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 APA12_RS05905 8995d134ab3b94ec1158fb704a6f2c27 275 Gene3D G3DSA:3.40.190.80 167 270 1.5E-20 T 19-04-2016 APA12_RS05905 8995d134ab3b94ec1158fb704a6f2c27 275 PANTHER PTHR20854 13 271 6.1E-63 T 19-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APA12_RS05905 8995d134ab3b94ec1158fb704a6f2c27 275 Gene3D G3DSA:3.30.540.10 18 166 7.0E-44 T 19-04-2016 APA12_RS05905 8995d134ab3b94ec1158fb704a6f2c27 275 Pfam PF00459 Inositol monophosphatase family 22 268 1.4E-50 T 19-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APA12_RS09935 d77019bd9cd6f035bd19cbeeb426bbe9 187 SMART SM00507 80 133 7.6E-10 T 19-04-2016 IPR003615 HNH nuclease APA12_RS09935 d77019bd9cd6f035bd19cbeeb426bbe9 187 PANTHER PTHR33877 9 187 1.3E-60 T 19-04-2016 APA12_RS09935 d77019bd9cd6f035bd19cbeeb426bbe9 187 Pfam PF14279 HNH endonuclease 93 141 2.8E-15 T 19-04-2016 IPR029471 HNH endonuclease 5 APA12_RS09935 d77019bd9cd6f035bd19cbeeb426bbe9 187 PANTHER PTHR33877:SF2 9 187 1.3E-60 T 19-04-2016 APA12_RS04950 e9a2e812d53c0f3555379b7a627cf896 170 PANTHER PTHR11839:SF13 6 165 7.8E-32 T 19-04-2016 APA12_RS04950 e9a2e812d53c0f3555379b7a627cf896 170 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 5 167 33.595 T 19-04-2016 IPR022927 RNA pyrophosphohydrolase RppH APA12_RS04950 e9a2e812d53c0f3555379b7a627cf896 170 Gene3D G3DSA:3.90.79.10 9 163 4.1E-27 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APA12_RS04950 e9a2e812d53c0f3555379b7a627cf896 170 Pfam PF00293 NUDIX domain 11 158 2.5E-23 T 19-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APA12_RS04950 e9a2e812d53c0f3555379b7a627cf896 170 SUPERFAMILY SSF55811 9 164 3.52E-28 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APA12_RS04950 e9a2e812d53c0f3555379b7a627cf896 170 PANTHER PTHR11839 6 165 7.8E-32 T 19-04-2016 APA12_RS04950 e9a2e812d53c0f3555379b7a627cf896 170 ProSitePatterns PS00893 Nudix box signature. 51 72 - T 19-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APA12_RS04235 2f71727f412e18735da350a9c1001fbb 119 Gene3D G3DSA:1.10.10.10 10 57 6.0E-11 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS04235 2f71727f412e18735da350a9c1001fbb 119 SUPERFAMILY SSF48295 8 57 4.03E-12 T 19-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 APA12_RS04235 2f71727f412e18735da350a9c1001fbb 119 Pfam PF01527 Transposase 10 76 2.5E-17 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 APA12_RS00900 2f71727f412e18735da350a9c1001fbb 119 Gene3D G3DSA:1.10.10.10 10 57 6.0E-11 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS00900 2f71727f412e18735da350a9c1001fbb 119 SUPERFAMILY SSF48295 8 57 4.03E-12 T 19-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 APA12_RS00900 2f71727f412e18735da350a9c1001fbb 119 Pfam PF01527 Transposase 10 76 2.5E-17 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 APA12_RS09230 2f71727f412e18735da350a9c1001fbb 119 Gene3D G3DSA:1.10.10.10 10 57 6.0E-11 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS09230 2f71727f412e18735da350a9c1001fbb 119 SUPERFAMILY SSF48295 8 57 4.03E-12 T 19-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 APA12_RS09230 2f71727f412e18735da350a9c1001fbb 119 Pfam PF01527 Transposase 10 76 2.5E-17 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 APA12_RS10995 2f71727f412e18735da350a9c1001fbb 119 Gene3D G3DSA:1.10.10.10 10 57 6.0E-11 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS10995 2f71727f412e18735da350a9c1001fbb 119 SUPERFAMILY SSF48295 8 57 4.03E-12 T 19-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 APA12_RS10995 2f71727f412e18735da350a9c1001fbb 119 Pfam PF01527 Transposase 10 76 2.5E-17 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 APA12_RS09060 2f71727f412e18735da350a9c1001fbb 119 Gene3D G3DSA:1.10.10.10 10 57 6.0E-11 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS09060 2f71727f412e18735da350a9c1001fbb 119 SUPERFAMILY SSF48295 8 57 4.03E-12 T 19-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 APA12_RS09060 2f71727f412e18735da350a9c1001fbb 119 Pfam PF01527 Transposase 10 76 2.5E-17 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 APA12_RS08875 d69d59437229c9495825a5bffdf20390 384 PANTHER PTHR32125:SF4 2 237 8.2E-56 T 19-04-2016 APA12_RS08875 d69d59437229c9495825a5bffdf20390 384 SUPERFAMILY SSF69765 227 382 6.15E-63 T 19-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 APA12_RS08875 d69d59437229c9495825a5bffdf20390 384 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 221 1.3E-58 T 19-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 APA12_RS08875 d69d59437229c9495825a5bffdf20390 384 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 228 383 33.678 T 19-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 APA12_RS08875 d69d59437229c9495825a5bffdf20390 384 Pfam PF02542 YgbB family 229 381 7.1E-60 T 19-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 APA12_RS08875 d69d59437229c9495825a5bffdf20390 384 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 102 109 - T 19-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 APA12_RS08875 d69d59437229c9495825a5bffdf20390 384 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 229 381 2.0E-64 T 19-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 APA12_RS08875 d69d59437229c9495825a5bffdf20390 384 SUPERFAMILY SSF53448 3 222 1.24E-49 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS08875 d69d59437229c9495825a5bffdf20390 384 Hamap MF_01520 Bifunctional enzyme IspD/IspF [ispDF]. 1 384 42.396 T 19-04-2016 IPR026596 Bifunctional enzyme IspD/IspF KEGG: 00900+4.6.1.12+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056|UniPathway: UPA00056 APA12_RS08875 d69d59437229c9495825a5bffdf20390 384 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 3 219 2.8E-54 T 19-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 APA12_RS08875 d69d59437229c9495825a5bffdf20390 384 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 2 230 27.759 T 19-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 APA12_RS08875 d69d59437229c9495825a5bffdf20390 384 Gene3D G3DSA:3.30.1330.50 228 381 1.1E-66 T 19-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 APA12_RS08875 d69d59437229c9495825a5bffdf20390 384 PANTHER PTHR32125 2 237 8.2E-56 T 19-04-2016 APA12_RS08875 d69d59437229c9495825a5bffdf20390 384 Gene3D G3DSA:3.90.550.10 1 222 3.6E-59 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS08875 d69d59437229c9495825a5bffdf20390 384 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 262 277 - T 19-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 APA12_RS03600 7d52d5a0963fa255dbaea3bb28bfa07b 188 Gene3D G3DSA:1.20.1200.10 17 187 2.0E-57 T 19-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 APA12_RS03600 7d52d5a0963fa255dbaea3bb28bfa07b 188 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 14 184 1.0E-40 T 19-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 APA12_RS03600 7d52d5a0963fa255dbaea3bb28bfa07b 188 Pfam PF01923 Cobalamin adenosyltransferase 8 173 1.1E-52 T 19-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 APA12_RS03600 7d52d5a0963fa255dbaea3bb28bfa07b 188 PANTHER PTHR12213 1 185 1.8E-59 T 19-04-2016 APA12_RS03600 7d52d5a0963fa255dbaea3bb28bfa07b 188 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 10 184 1.1E-51 T 19-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 APA12_RS03600 7d52d5a0963fa255dbaea3bb28bfa07b 188 SUPERFAMILY SSF89028 7 185 2.35E-53 T 19-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 APA12_RS04185 e187b6a164a2abda6b5db7c0102a1685 110 Pfam PF05534 HicB family 56 105 7.2E-18 T 19-04-2016 IPR008651 Uncharacterised protein family HicB APA12_RS04185 e187b6a164a2abda6b5db7c0102a1685 110 SUPERFAMILY SSF47598 69 107 1.33E-7 T 19-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 APA12_RS04185 e187b6a164a2abda6b5db7c0102a1685 110 Gene3D G3DSA:1.10.1220.10 73 106 4.3E-4 T 19-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 APA12_RS04185 e187b6a164a2abda6b5db7c0102a1685 110 SUPERFAMILY SSF143100 1 76 1.02E-5 T 19-04-2016 APA12_RS11720 b3176f30f9f1b31f856235759c0a30fd 356 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 9 350 2.7E-89 T 19-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 APA12_RS11720 b3176f30f9f1b31f856235759c0a30fd 356 Gene3D G3DSA:3.40.640.10 38 252 1.8E-61 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APA12_RS11720 b3176f30f9f1b31f856235759c0a30fd 356 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 207 216 - T 19-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 APA12_RS11720 b3176f30f9f1b31f856235759c0a30fd 356 SUPERFAMILY SSF53383 5 351 3.98E-76 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APA12_RS11720 b3176f30f9f1b31f856235759c0a30fd 356 PANTHER PTHR11751 3 350 7.5E-110 T 19-04-2016 APA12_RS11720 b3176f30f9f1b31f856235759c0a30fd 356 Pfam PF00155 Aminotransferase class I and II 24 347 1.2E-61 T 19-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APA12_RS11720 b3176f30f9f1b31f856235759c0a30fd 356 Gene3D G3DSA:3.90.1150.10 253 351 4.6E-24 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APA12_RS11720 b3176f30f9f1b31f856235759c0a30fd 356 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 351 56.091 T 19-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 APA12_RS11720 b3176f30f9f1b31f856235759c0a30fd 356 PANTHER PTHR11751:SF398 3 350 7.5E-110 T 19-04-2016 APA12_RS02115 f72de566339db83996959186819b01f4 307 Gene3D G3DSA:3.40.190.10 92 172 1.4E-22 T 19-04-2016 APA12_RS02115 f72de566339db83996959186819b01f4 307 Gene3D G3DSA:1.10.10.10 3 86 3.3E-24 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS02115 f72de566339db83996959186819b01f4 307 Pfam PF03466 LysR substrate binding domain 89 293 1.0E-41 T 19-04-2016 IPR005119 LysR, substrate-binding APA12_RS02115 f72de566339db83996959186819b01f4 307 PANTHER PTHR30537:SF11 1 306 1.1E-131 T 19-04-2016 APA12_RS02115 f72de566339db83996959186819b01f4 307 Gene3D G3DSA:3.40.190.10 173 263 7.4E-24 T 19-04-2016 APA12_RS02115 f72de566339db83996959186819b01f4 307 SUPERFAMILY SSF46785 4 86 8.09E-21 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS02115 f72de566339db83996959186819b01f4 307 PANTHER PTHR30537 1 306 1.1E-131 T 19-04-2016 APA12_RS02115 f72de566339db83996959186819b01f4 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 5.8E-18 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS02115 f72de566339db83996959186819b01f4 307 SUPERFAMILY SSF53850 90 299 8.32E-46 T 19-04-2016 APA12_RS11175 e33e12398644ac604d166c6cb6231981 319 SUPERFAMILY SSF52343 99 230 2.36E-23 T 19-04-2016 APA12_RS11175 e33e12398644ac604d166c6cb6231981 319 Gene3D G3DSA:2.40.30.10 11 101 6.1E-26 T 19-04-2016 APA12_RS11175 e33e12398644ac604d166c6cb6231981 319 Gene3D G3DSA:3.40.50.80 104 220 2.9E-22 T 19-04-2016 APA12_RS11175 e33e12398644ac604d166c6cb6231981 319 PANTHER PTHR22924:SF20 24 277 2.3E-62 T 19-04-2016 APA12_RS11175 e33e12398644ac604d166c6cb6231981 319 SUPERFAMILY SSF54292 216 317 4.59E-24 T 19-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APA12_RS11175 e33e12398644ac604d166c6cb6231981 319 Gene3D G3DSA:3.10.20.30 221 317 2.2E-26 T 19-04-2016 IPR012675 Beta-grasp domain APA12_RS11175 e33e12398644ac604d166c6cb6231981 319 Pfam PF00175 Oxidoreductase NAD-binding domain 114 207 1.9E-5 T 19-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 APA12_RS11175 e33e12398644ac604d166c6cb6231981 319 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 243 307 6.1E-12 T 19-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APA12_RS11175 e33e12398644ac604d166c6cb6231981 319 PRINTS PR00409 Phthalate dioxygenase reductase family signature 77 91 4.2E-43 T 19-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 APA12_RS11175 e33e12398644ac604d166c6cb6231981 319 PRINTS PR00409 Phthalate dioxygenase reductase family signature 113 132 4.2E-43 T 19-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 APA12_RS11175 e33e12398644ac604d166c6cb6231981 319 PRINTS PR00409 Phthalate dioxygenase reductase family signature 53 67 4.2E-43 T 19-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 APA12_RS11175 e33e12398644ac604d166c6cb6231981 319 PRINTS PR00409 Phthalate dioxygenase reductase family signature 41 53 4.2E-43 T 19-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 APA12_RS11175 e33e12398644ac604d166c6cb6231981 319 PRINTS PR00409 Phthalate dioxygenase reductase family signature 31 41 4.2E-43 T 19-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 APA12_RS11175 e33e12398644ac604d166c6cb6231981 319 PRINTS PR00409 Phthalate dioxygenase reductase family signature 193 201 4.2E-43 T 19-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 APA12_RS11175 e33e12398644ac604d166c6cb6231981 319 PRINTS PR00409 Phthalate dioxygenase reductase family signature 138 147 4.2E-43 T 19-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 APA12_RS11175 e33e12398644ac604d166c6cb6231981 319 PRINTS PR00409 Phthalate dioxygenase reductase family signature 91 105 4.2E-43 T 19-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 APA12_RS11175 e33e12398644ac604d166c6cb6231981 319 PANTHER PTHR22924 24 277 2.3E-62 T 19-04-2016 APA12_RS11175 e33e12398644ac604d166c6cb6231981 319 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 270 278 - T 19-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 APA12_RS11175 e33e12398644ac604d166c6cb6231981 319 SUPERFAMILY SSF63380 10 101 1.34E-20 T 19-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APA12_RS09335 248a7cf2777ff3bea4ae14de5c3798b4 488 Pfam PF04966 Carbohydrate-selective porin, OprB family 109 486 2.4E-79 T 19-04-2016 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 APA12_RS09335 248a7cf2777ff3bea4ae14de5c3798b4 488 PANTHER PTHR37944 71 488 3.2E-42 T 19-04-2016 APA12_RS12395 608728a830ae3b4eb74852a03a44456b 318 PANTHER PTHR36698:SF2 3 249 7.4E-20 T 19-04-2016 APA12_RS12395 608728a830ae3b4eb74852a03a44456b 318 Gene3D G3DSA:1.10.10.10 205 274 5.0E-4 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS12395 608728a830ae3b4eb74852a03a44456b 318 Pfam PF02470 MlaD protein 47 137 7.8E-14 T 19-04-2016 IPR003399 Mce/MlaD APA12_RS12395 608728a830ae3b4eb74852a03a44456b 318 PANTHER PTHR36698 3 249 7.4E-20 T 19-04-2016 APA12_RS04365 0e42f7edf9d6509b621e86a67fdf7fc4 328 PANTHER PTHR10366:SF39 3 326 8.5E-98 T 19-04-2016 APA12_RS04365 0e42f7edf9d6509b621e86a67fdf7fc4 328 Gene3D G3DSA:3.90.25.10 171 327 2.0E-40 T 19-04-2016 APA12_RS04365 0e42f7edf9d6509b621e86a67fdf7fc4 328 Gene3D G3DSA:3.40.50.720 1 170 2.8E-46 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS04365 0e42f7edf9d6509b621e86a67fdf7fc4 328 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 4 325 3.5E-116 T 19-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 APA12_RS04365 0e42f7edf9d6509b621e86a67fdf7fc4 328 SUPERFAMILY SSF51735 1 326 9.86E-90 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS04365 0e42f7edf9d6509b621e86a67fdf7fc4 328 PANTHER PTHR10366 3 326 8.5E-98 T 19-04-2016 APA12_RS04365 0e42f7edf9d6509b621e86a67fdf7fc4 328 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 251 2.5E-55 T 19-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 APA12_RS07190 1c48226a3cd418a98544f1b426076485 103 SUPERFAMILY SSF116734 2 87 9.32E-15 T 19-04-2016 APA12_RS07190 1c48226a3cd418a98544f1b426076485 103 Pfam PF01420 Type I restriction modification DNA specificity domain 3 81 1.9E-5 T 19-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 APA12_RS06020 3905bda5116f2d5d75151be0d84c41d0 497 SUPERFAMILY SSF54211 10 169 8.34E-27 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APA12_RS06020 3905bda5116f2d5d75151be0d84c41d0 497 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 140 1.3E-38 T 19-04-2016 APA12_RS06020 3905bda5116f2d5d75151be0d84c41d0 497 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 8 491 9.4E-151 T 19-04-2016 IPR004482 Mg chelatase-related protein APA12_RS06020 3905bda5116f2d5d75151be0d84c41d0 497 Gene3D G3DSA:3.40.50.300 189 386 5.9E-48 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS06020 3905bda5116f2d5d75151be0d84c41d0 497 PANTHER PTHR32039 1 493 2.9E-200 T 19-04-2016 APA12_RS06020 3905bda5116f2d5d75151be0d84c41d0 497 PANTHER PTHR32039:SF7 1 493 2.9E-200 T 19-04-2016 IPR004482 Mg chelatase-related protein APA12_RS06020 3905bda5116f2d5d75151be0d84c41d0 497 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 390 2.0E-89 T 19-04-2016 IPR000523 Magnesium chelatase ChlI domain APA12_RS06020 3905bda5116f2d5d75151be0d84c41d0 497 SUPERFAMILY SSF52540 190 492 3.28E-43 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS06020 3905bda5116f2d5d75151be0d84c41d0 497 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 341 353 6.2E-6 T 19-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 APA12_RS06020 3905bda5116f2d5d75151be0d84c41d0 497 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 289 303 6.2E-6 T 19-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 APA12_RS06020 3905bda5116f2d5d75151be0d84c41d0 497 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 6.2E-6 T 19-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 APA12_RS06020 3905bda5116f2d5d75151be0d84c41d0 497 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 330 6.2E-6 T 19-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 APA12_RS06020 3905bda5116f2d5d75151be0d84c41d0 497 Gene3D G3DSA:3.30.230.10 8 166 2.0E-23 T 19-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APA12_RS06020 3905bda5116f2d5d75151be0d84c41d0 497 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 402 491 2.9E-21 T 19-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain APA12_RS06020 3905bda5116f2d5d75151be0d84c41d0 497 SMART SM00382 210 392 7.8E-8 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS08920 f4d085cf78da989828cad96973941496 160 PANTHER PTHR39563 3 155 2.3E-55 T 19-04-2016 APA12_RS08920 f4d085cf78da989828cad96973941496 160 SUPERFAMILY SSF53271 7 148 1.42E-27 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like APA12_RS08920 f4d085cf78da989828cad96973941496 160 Gene3D G3DSA:3.40.50.2020 7 150 6.5E-38 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like APA12_RS08920 f4d085cf78da989828cad96973941496 160 Pfam PF00156 Phosphoribosyl transferase domain 32 145 5.2E-12 T 19-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APA12_RS00385 0a57760f714ab1a4bd2634f538f72689 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 70 93 6.2E-60 T 19-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APA12_RS00385 0a57760f714ab1a4bd2634f538f72689 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 305 331 6.2E-60 T 19-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APA12_RS00385 0a57760f714ab1a4bd2634f538f72689 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 133 152 6.2E-60 T 19-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APA12_RS00385 0a57760f714ab1a4bd2634f538f72689 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 50 68 6.2E-60 T 19-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APA12_RS00385 0a57760f714ab1a4bd2634f538f72689 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 188 208 6.2E-60 T 19-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APA12_RS00385 0a57760f714ab1a4bd2634f538f72689 348 PANTHER PTHR19375 9 331 8.4E-165 T 19-04-2016 APA12_RS00385 0a57760f714ab1a4bd2634f538f72689 348 SUPERFAMILY SSF53067 10 149 3.89E-40 T 19-04-2016 APA12_RS00385 0a57760f714ab1a4bd2634f538f72689 348 Pfam PF06723 MreB/Mbl protein 11 340 1.9E-149 T 19-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APA12_RS00385 0a57760f714ab1a4bd2634f538f72689 348 SUPERFAMILY SSF53067 150 334 1.67E-46 T 19-04-2016 APA12_RS00385 0a57760f714ab1a4bd2634f538f72689 348 Gene3D G3DSA:3.30.420.40 9 160 6.6E-48 T 19-04-2016 APA12_RS00385 0a57760f714ab1a4bd2634f538f72689 348 PANTHER PTHR19375:SF117 9 331 8.4E-165 T 19-04-2016 APA12_RS00385 0a57760f714ab1a4bd2634f538f72689 348 Gene3D G3DSA:3.30.420.40 268 321 7.2E-32 T 19-04-2016 APA12_RS00385 0a57760f714ab1a4bd2634f538f72689 348 Gene3D G3DSA:3.30.420.40 161 187 7.2E-32 T 19-04-2016 APA12_RS00385 0a57760f714ab1a4bd2634f538f72689 348 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 10 341 9.1E-154 T 19-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APA12_RS00385 0a57760f714ab1a4bd2634f538f72689 348 Gene3D G3DSA:3.90.640.10 188 264 1.2E-25 T 19-04-2016 APA12_RS06235 b2025a051dbf619480cedee2cb107452 260 Gene3D G3DSA:3.40.50.150 35 259 1.5E-50 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS06235 b2025a051dbf619480cedee2cb107452 260 PANTHER PTHR10108:SF864 18 259 1.6E-111 T 19-04-2016 APA12_RS06235 b2025a051dbf619480cedee2cb107452 260 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 36 258 1.8E-78 T 19-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 APA12_RS06235 b2025a051dbf619480cedee2cb107452 260 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 167 181 - T 19-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 APA12_RS06235 b2025a051dbf619480cedee2cb107452 260 Pfam PF01209 ubiE/COQ5 methyltransferase family 30 258 3.8E-86 T 19-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 APA12_RS06235 b2025a051dbf619480cedee2cb107452 260 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 27 259 37.501 T 19-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 APA12_RS06235 b2025a051dbf619480cedee2cb107452 260 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 47 62 - T 19-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 APA12_RS06235 b2025a051dbf619480cedee2cb107452 260 SUPERFAMILY SSF53335 28 256 1.18E-42 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS06235 b2025a051dbf619480cedee2cb107452 260 PANTHER PTHR10108 18 259 1.6E-111 T 19-04-2016 APA12_RS14010 7b1643d75ce0f28f5221705fca813c37 125 PANTHER PTHR26402 35 118 1.5E-17 T 19-04-2016 APA12_RS14010 7b1643d75ce0f28f5221705fca813c37 125 Pfam PF00072 Response regulator receiver domain 37 118 2.0E-14 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS14010 7b1643d75ce0f28f5221705fca813c37 125 Gene3D G3DSA:3.40.50.2300 33 120 9.1E-23 T 19-04-2016 APA12_RS14010 7b1643d75ce0f28f5221705fca813c37 125 SMART SM00448 35 125 0.0069 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS14010 7b1643d75ce0f28f5221705fca813c37 125 SUPERFAMILY SSF52172 35 121 5.69E-20 T 19-04-2016 IPR011006 CheY-like superfamily APA12_RS02190 3a0b3a19212dd848edd6bf04c2445b30 601 SUPERFAMILY SSF51294 254 391 7.59E-11 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS02190 3a0b3a19212dd848edd6bf04c2445b30 601 Pfam PF13403 Hint domain 253 394 4.2E-43 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS02190 3a0b3a19212dd848edd6bf04c2445b30 601 Gene3D G3DSA:2.170.16.10 252 399 8.7E-7 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS01100 d30b3da36413757b34d2bb6fcd1bd161 362 Gene3D G3DSA:3.30.70.20 201 268 8.6E-7 T 19-04-2016 APA12_RS01100 d30b3da36413757b34d2bb6fcd1bd161 362 PANTHER PTHR30002 6 355 3.6E-137 T 19-04-2016 APA12_RS01100 d30b3da36413757b34d2bb6fcd1bd161 362 Pfam PF13484 4Fe-4S double cluster binding domain 202 265 4.9E-18 T 19-04-2016 APA12_RS01100 d30b3da36413757b34d2bb6fcd1bd161 362 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 18 355 1.9E-136 T 19-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 APA12_RS01100 d30b3da36413757b34d2bb6fcd1bd161 362 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 202 213 - T 19-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APA12_RS01100 d30b3da36413757b34d2bb6fcd1bd161 362 Pfam PF08331 Domain of unknown function (DUF1730) 67 149 2.1E-22 T 19-04-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 APA12_RS01100 d30b3da36413757b34d2bb6fcd1bd161 362 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 11 324 44.394 T 19-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 APA12_RS01100 d30b3da36413757b34d2bb6fcd1bd161 362 SUPERFAMILY SSF46548 148 265 3.71E-17 T 19-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APA12_RS01100 d30b3da36413757b34d2bb6fcd1bd161 362 PANTHER PTHR30002:SF4 6 355 3.6E-137 T 19-04-2016 APA12_RS08860 ff3747f7fe09f6eabaeb29c453e4f6a2 480 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 19-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 APA12_RS08860 ff3747f7fe09f6eabaeb29c453e4f6a2 480 SUPERFAMILY SSF46689 421 473 3.76E-19 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS08860 ff3747f7fe09f6eabaeb29c453e4f6a2 480 SUPERFAMILY SSF46689 351 394 3.76E-19 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS08860 ff3747f7fe09f6eabaeb29c453e4f6a2 480 SMART SM00382 162 302 2.9E-10 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS08860 ff3747f7fe09f6eabaeb29c453e4f6a2 480 SUPERFAMILY SSF52540 142 379 1.66E-67 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS08860 ff3747f7fe09f6eabaeb29c453e4f6a2 480 Gene3D G3DSA:3.40.50.300 141 311 1.3E-60 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS08860 ff3747f7fe09f6eabaeb29c453e4f6a2 480 Pfam PF02954 Bacterial regulatory protein, Fis family 431 469 3.4E-13 T 19-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APA12_RS08860 ff3747f7fe09f6eabaeb29c453e4f6a2 480 Gene3D G3DSA:1.10.10.60 404 473 1.0E-19 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS08860 ff3747f7fe09f6eabaeb29c453e4f6a2 480 SUPERFAMILY SSF52172 5 186 2.99E-41 T 19-04-2016 IPR011006 CheY-like superfamily APA12_RS08860 ff3747f7fe09f6eabaeb29c453e4f6a2 480 Gene3D G3DSA:3.40.50.2300 6 132 4.5E-34 T 19-04-2016 APA12_RS08860 ff3747f7fe09f6eabaeb29c453e4f6a2 480 Pfam PF00158 Sigma-54 interaction domain 142 305 1.7E-60 T 19-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 APA12_RS08860 ff3747f7fe09f6eabaeb29c453e4f6a2 480 SMART SM00448 5 116 1.1E-33 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS08860 ff3747f7fe09f6eabaeb29c453e4f6a2 480 Pfam PF00072 Response regulator receiver domain 7 116 1.6E-27 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS08860 ff3747f7fe09f6eabaeb29c453e4f6a2 480 PANTHER PTHR32071 7 473 1.2E-183 T 19-04-2016 APA12_RS08860 ff3747f7fe09f6eabaeb29c453e4f6a2 480 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 7 471 2.6E-193 T 19-04-2016 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 APA12_RS08860 ff3747f7fe09f6eabaeb29c453e4f6a2 480 Gene3D G3DSA:1.10.8.60 312 386 2.0E-22 T 19-04-2016 APA12_RS08860 ff3747f7fe09f6eabaeb29c453e4f6a2 480 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 351 360 - T 19-04-2016 IPR025944 Sigma-54 interaction domain, conserved site APA12_RS08860 ff3747f7fe09f6eabaeb29c453e4f6a2 480 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 454 474 2.7E-10 T 19-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APA12_RS08860 ff3747f7fe09f6eabaeb29c453e4f6a2 480 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 437 454 2.7E-10 T 19-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APA12_RS04030 e3032e4dcd994aaf1cc445e944291be8 172 SUPERFAMILY SSF53254 2 160 4.71E-29 T 19-04-2016 IPR029033 Histidine phosphatase superfamily APA12_RS04030 e3032e4dcd994aaf1cc445e944291be8 172 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 2 158 3.3E-24 T 19-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APA12_RS04030 e3032e4dcd994aaf1cc445e944291be8 172 Gene3D G3DSA:3.40.50.1240 2 159 5.1E-26 T 19-04-2016 IPR029033 Histidine phosphatase superfamily APA12_RS04030 e3032e4dcd994aaf1cc445e944291be8 172 PANTHER PTHR23029 2 150 1.6E-28 T 19-04-2016 APA12_RS04030 e3032e4dcd994aaf1cc445e944291be8 172 PANTHER PTHR23029:SF1 2 150 1.6E-28 T 19-04-2016 APA12_RS06635 807381408dfeb3d6b40c6120d0fdbbdf 410 Pfam PF06965 Na+/H+ antiporter 1 14 389 7.3E-121 T 19-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 APA12_RS06635 807381408dfeb3d6b40c6120d0fdbbdf 410 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 12 396 19.817 T 19-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 APA12_RS06635 807381408dfeb3d6b40c6120d0fdbbdf 410 PANTHER PTHR30341:SF0 1 403 1.9E-114 T 19-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 APA12_RS06635 807381408dfeb3d6b40c6120d0fdbbdf 410 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 15 389 5.3E-101 T 19-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 APA12_RS06635 807381408dfeb3d6b40c6120d0fdbbdf 410 Gene3D G3DSA:1.20.1530.10 11 391 2.4E-124 T 19-04-2016 IPR023171 Na/H antiporter domain APA12_RS06635 807381408dfeb3d6b40c6120d0fdbbdf 410 PANTHER PTHR30341 1 403 1.9E-114 T 19-04-2016 APA12_RS00390 ab369a705e1b2b4862ab737f20f518c6 529 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 20 513 2.5E-201 T 19-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APA12_RS00390 ab369a705e1b2b4862ab737f20f518c6 529 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 28 44 - T 19-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APA12_RS00390 ab369a705e1b2b4862ab737f20f518c6 529 Pfam PF00682 HMGL-like 21 289 3.9E-90 T 19-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 APA12_RS00390 ab369a705e1b2b4862ab737f20f518c6 529 SUPERFAMILY SSF51569 15 308 8.79E-95 T 19-04-2016 APA12_RS00390 ab369a705e1b2b4862ab737f20f518c6 529 Pfam PF08502 LeuA allosteric (dimerisation) domain 388 516 6.9E-32 T 19-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APA12_RS00390 ab369a705e1b2b4862ab737f20f518c6 529 PANTHER PTHR10277 18 524 1.2E-231 T 19-04-2016 APA12_RS00390 ab369a705e1b2b4862ab737f20f518c6 529 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 18 525 40.37 T 19-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APA12_RS00390 ab369a705e1b2b4862ab737f20f518c6 529 SMART SM00917 387 516 3.7E-39 T 19-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APA12_RS00390 ab369a705e1b2b4862ab737f20f518c6 529 Gene3D G3DSA:3.20.20.70 14 364 4.4E-142 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS00390 ab369a705e1b2b4862ab737f20f518c6 529 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 216 229 - T 19-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APA12_RS00390 ab369a705e1b2b4862ab737f20f518c6 529 PANTHER PTHR10277:SF9 18 524 1.2E-231 T 19-04-2016 APA12_RS00390 ab369a705e1b2b4862ab737f20f518c6 529 SUPERFAMILY SSF110921 419 515 3.53E-24 T 19-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APA12_RS09300 e348fea9526ea34b938dc026f1f1a649 487 SUPERFAMILY SSF51182 202 486 2.78E-79 T 19-04-2016 IPR011051 RmlC-like cupin domain APA12_RS09300 e348fea9526ea34b938dc026f1f1a649 487 Pfam PF01050 Mannose-6-phosphate isomerase 332 482 4.0E-70 T 19-04-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 APA12_RS09300 e348fea9526ea34b938dc026f1f1a649 487 SUPERFAMILY SSF53448 19 299 1.52E-68 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS09300 e348fea9526ea34b938dc026f1f1a649 487 Gene3D G3DSA:3.90.550.10 18 288 4.8E-92 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS09300 e348fea9526ea34b938dc026f1f1a649 487 PANTHER PTHR12526 373 486 5.2E-106 T 19-04-2016 APA12_RS09300 e348fea9526ea34b938dc026f1f1a649 487 PANTHER PTHR12526 169 306 5.2E-106 T 19-04-2016 APA12_RS09300 e348fea9526ea34b938dc026f1f1a649 487 PANTHER PTHR12526:SF357 373 486 5.2E-106 T 19-04-2016 APA12_RS09300 e348fea9526ea34b938dc026f1f1a649 487 PANTHER PTHR12526:SF357 169 306 5.2E-106 T 19-04-2016 APA12_RS09300 e348fea9526ea34b938dc026f1f1a649 487 Pfam PF00483 Nucleotidyl transferase 21 303 2.2E-64 T 19-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 APA12_RS09300 e348fea9526ea34b938dc026f1f1a649 487 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 20 485 1.6E-209 T 19-04-2016 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 APA12_RS09300 e348fea9526ea34b938dc026f1f1a649 487 Gene3D G3DSA:2.60.120.10 375 486 2.7E-42 T 19-04-2016 IPR014710 RmlC-like jelly roll fold APA12_RS05105 cc8ddf8656b81d35a290f95bd780eeb3 462 PANTHER PTHR30483 59 273 5.8E-13 T 19-04-2016 APA12_RS05105 cc8ddf8656b81d35a290f95bd780eeb3 462 Gene3D G3DSA:3.40.50.2300 58 166 2.3E-32 T 19-04-2016 APA12_RS05105 cc8ddf8656b81d35a290f95bd780eeb3 462 Gene3D G3DSA:3.40.50.2300 355 436 2.3E-32 T 19-04-2016 APA12_RS05105 cc8ddf8656b81d35a290f95bd780eeb3 462 SUPERFAMILY SSF53822 304 445 5.5E-52 T 19-04-2016 IPR028082 Periplasmic binding protein-like I APA12_RS05105 cc8ddf8656b81d35a290f95bd780eeb3 462 SUPERFAMILY SSF53822 58 235 5.5E-52 T 19-04-2016 IPR028082 Periplasmic binding protein-like I APA12_RS05105 cc8ddf8656b81d35a290f95bd780eeb3 462 Pfam PF13458 Periplasmic binding protein 59 444 4.9E-20 T 19-04-2016 IPR028081 Leucine-binding protein domain APA12_RS06800 d69441472ad21f13d6690c2db6a18ab5 460 PANTHER PTHR23501 76 458 1.0E-91 T 19-04-2016 APA12_RS06800 d69441472ad21f13d6690c2db6a18ab5 460 Pfam PF07690 Major Facilitator Superfamily 79 322 5.2E-27 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APA12_RS06800 d69441472ad21f13d6690c2db6a18ab5 460 Gene3D G3DSA:1.20.1250.20 277 446 2.7E-13 T 19-04-2016 APA12_RS06800 d69441472ad21f13d6690c2db6a18ab5 460 Gene3D G3DSA:1.20.1250.20 75 253 5.9E-28 T 19-04-2016 APA12_RS06800 d69441472ad21f13d6690c2db6a18ab5 460 SUPERFAMILY SSF103473 74 454 1.23E-53 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS06800 d69441472ad21f13d6690c2db6a18ab5 460 PANTHER PTHR23501:SF80 76 458 1.0E-91 T 19-04-2016 APA12_RS06800 d69441472ad21f13d6690c2db6a18ab5 460 ProSitePatterns PS00216 Sugar transport proteins signature 1. 128 144 - T 19-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APA12_RS03615 9d19261fe33937418a8801e004db3fda 478 Gene3D G3DSA:1.10.45.10 435 474 1.2E-11 T 19-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 APA12_RS03615 9d19261fe33937418a8801e004db3fda 478 Pfam PF01565 FAD binding domain 47 186 3.3E-36 T 19-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 APA12_RS03615 9d19261fe33937418a8801e004db3fda 478 SUPERFAMILY SSF56176 9 224 4.91E-69 T 19-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APA12_RS03615 9d19261fe33937418a8801e004db3fda 478 Pfam PF02913 FAD linked oxidases, C-terminal domain 224 474 8.1E-55 T 19-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 APA12_RS03615 9d19261fe33937418a8801e004db3fda 478 PANTHER PTHR11748:SF76 1 476 7.4E-181 T 19-04-2016 APA12_RS03615 9d19261fe33937418a8801e004db3fda 478 SUPERFAMILY SSF55103 227 476 1.49E-58 T 19-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 APA12_RS03615 9d19261fe33937418a8801e004db3fda 478 Gene3D G3DSA:3.30.465.10 103 224 4.3E-35 T 19-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APA12_RS03615 9d19261fe33937418a8801e004db3fda 478 Gene3D G3DSA:3.30.43.10 6 101 8.2E-23 T 19-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 APA12_RS03615 9d19261fe33937418a8801e004db3fda 478 PANTHER PTHR11748 1 476 7.4E-181 T 19-04-2016 APA12_RS05915 313a72022e1f5e1cd82f2e464fbbcdb3 318 PANTHER PTHR30518 61 315 3.2E-61 T 19-04-2016 APA12_RS05915 313a72022e1f5e1cd82f2e464fbbcdb3 318 Gene3D G3DSA:3.30.160.60 284 315 7.4E-16 T 19-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 APA12_RS05915 313a72022e1f5e1cd82f2e464fbbcdb3 318 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 135 311 1.6E-56 T 19-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like APA12_RS05915 313a72022e1f5e1cd82f2e464fbbcdb3 318 PANTHER PTHR30518:SF2 61 315 3.2E-61 T 19-04-2016 APA12_RS05915 313a72022e1f5e1cd82f2e464fbbcdb3 318 Pfam PF02618 YceG-like family 34 310 1.6E-71 T 19-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like APA12_RS09275 47538e09444e43deaa93a0a74b72e135 756 Gene3D G3DSA:3.40.50.300 482 662 5.6E-26 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS09275 47538e09444e43deaa93a0a74b72e135 756 TIGRFAM TIGR00595 priA: primosomal protein N' 248 753 1.3E-191 T 19-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 APA12_RS09275 47538e09444e43deaa93a0a74b72e135 756 SMART SM00487 220 424 8.8E-20 T 19-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APA12_RS09275 47538e09444e43deaa93a0a74b72e135 756 Gene3D G3DSA:3.40.50.300 221 408 7.1E-39 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS09275 47538e09444e43deaa93a0a74b72e135 756 PANTHER PTHR30580 17 756 4.8E-215 T 19-04-2016 APA12_RS09275 47538e09444e43deaa93a0a74b72e135 756 SMART SM00490 522 619 0.009 T 19-04-2016 IPR001650 Helicase, C-terminal APA12_RS09275 47538e09444e43deaa93a0a74b72e135 756 Hamap MF_00983 Probable primosomal protein N' [priA]. 29 755 23.336 T 19-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 APA12_RS09275 47538e09444e43deaa93a0a74b72e135 756 SUPERFAMILY SSF52540 534 647 4.56E-26 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS09275 47538e09444e43deaa93a0a74b72e135 756 SUPERFAMILY SSF52540 247 295 4.56E-26 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS09275 47538e09444e43deaa93a0a74b72e135 756 Pfam PF00270 DEAD/DEAH box helicase 247 391 3.2E-13 T 19-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APA12_RS09275 47538e09444e43deaa93a0a74b72e135 756 SUPERFAMILY SSF52540 221 407 5.08E-40 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS07050 4a4158b1386054278997491abb0d8330 214 TIGRFAM TIGR03424 urea_degr_1: urea carboxylase-associated protein 1 13 208 1.8E-98 T 19-04-2016 IPR017791 Urea carboxylase-associated protein 1 APA12_RS07050 4a4158b1386054278997491abb0d8330 214 PANTHER PTHR31527 12 211 2.2E-60 T 19-04-2016 APA12_RS07050 4a4158b1386054278997491abb0d8330 214 Pfam PF09347 Domain of unknown function (DUF1989) 18 183 2.5E-64 T 19-04-2016 IPR018959 Domain of unknown function DUF1989 APA12_RS07050 4a4158b1386054278997491abb0d8330 214 PANTHER PTHR31527:SF0 12 211 2.2E-60 T 19-04-2016 APA12_RS06625 fdaa41ce4112b2d9055057968b464721 193 SUPERFAMILY SSF46689 10 82 2.41E-11 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS06625 fdaa41ce4112b2d9055057968b464721 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 66 2.3E-6 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APA12_RS06625 fdaa41ce4112b2d9055057968b464721 193 Gene3D G3DSA:1.10.357.10 68 171 1.5E-19 T 19-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APA12_RS06625 fdaa41ce4112b2d9055057968b464721 193 Gene3D G3DSA:1.10.10.60 6 67 7.5E-12 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS06625 fdaa41ce4112b2d9055057968b464721 193 PANTHER PTHR30055 2 176 3.6E-26 T 19-04-2016 APA12_RS06625 fdaa41ce4112b2d9055057968b464721 193 SUPERFAMILY SSF48498 87 174 1.78E-16 T 19-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APA12_RS06625 fdaa41ce4112b2d9055057968b464721 193 PANTHER PTHR30055:SF23 2 176 3.6E-26 T 19-04-2016 APA12_RS06625 fdaa41ce4112b2d9055057968b464721 193 Pfam PF13305 WHG domain 88 168 5.3E-17 T 19-04-2016 IPR025996 WHG domain APA12_RS11905 c877293c0f86a3f6b0cb97f63d18c8b1 568 Gene3D G3DSA:2.30.40.10 68 144 1.0E-15 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APA12_RS11905 c877293c0f86a3f6b0cb97f63d18c8b1 568 Pfam PF01979 Amidohydrolase family 126 450 2.9E-77 T 19-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APA12_RS11905 c877293c0f86a3f6b0cb97f63d18c8b1 568 PANTHER PTHR22642 321 501 3.2E-256 T 19-04-2016 APA12_RS11905 c877293c0f86a3f6b0cb97f63d18c8b1 568 PANTHER PTHR22642 24 297 3.2E-256 T 19-04-2016 APA12_RS11905 c877293c0f86a3f6b0cb97f63d18c8b1 568 SUPERFAMILY SSF51556 481 568 1.86E-197 T 19-04-2016 IPR032466 Metal-dependent hydrolase APA12_RS11905 c877293c0f86a3f6b0cb97f63d18c8b1 568 SUPERFAMILY SSF51556 130 432 1.86E-197 T 19-04-2016 IPR032466 Metal-dependent hydrolase APA12_RS11905 c877293c0f86a3f6b0cb97f63d18c8b1 568 PANTHER PTHR22642:SF7 321 501 3.2E-256 T 19-04-2016 APA12_RS11905 c877293c0f86a3f6b0cb97f63d18c8b1 568 PANTHER PTHR22642:SF7 24 297 3.2E-256 T 19-04-2016 APA12_RS11905 c877293c0f86a3f6b0cb97f63d18c8b1 568 SUPERFAMILY SSF51338 410 477 2.94E-6 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APA12_RS11905 c877293c0f86a3f6b0cb97f63d18c8b1 568 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 401 416 9.9E-34 T 19-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APA12_RS11905 c877293c0f86a3f6b0cb97f63d18c8b1 568 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 296 313 9.9E-34 T 19-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APA12_RS11905 c877293c0f86a3f6b0cb97f63d18c8b1 568 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 335 351 9.9E-34 T 19-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APA12_RS11905 c877293c0f86a3f6b0cb97f63d18c8b1 568 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 427 440 9.9E-34 T 19-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APA12_RS11905 c877293c0f86a3f6b0cb97f63d18c8b1 568 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 4 568 3.4E-296 T 19-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APA12_RS11905 c877293c0f86a3f6b0cb97f63d18c8b1 568 Pfam PF00449 Urease alpha-subunit, N-terminal domain 3 120 5.5E-55 T 19-04-2016 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APA12_RS11905 c877293c0f86a3f6b0cb97f63d18c8b1 568 ProSitePatterns PS00145 Urease active site. 318 334 - T 19-04-2016 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APA12_RS11905 c877293c0f86a3f6b0cb97f63d18c8b1 568 SUPERFAMILY SSF51338 2 178 1.03E-60 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APA12_RS11905 c877293c0f86a3f6b0cb97f63d18c8b1 568 ProSitePatterns PS01120 Urease nickel ligands signature. 128 141 - T 19-04-2016 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APA12_RS11905 c877293c0f86a3f6b0cb97f63d18c8b1 568 Hamap MF_01953 Urease subunit alpha [ureC]. 2 568 56.403 T 19-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APA12_RS11905 c877293c0f86a3f6b0cb97f63d18c8b1 568 Gene3D G3DSA:3.20.20.140 488 566 2.1E-209 T 19-04-2016 APA12_RS11905 c877293c0f86a3f6b0cb97f63d18c8b1 568 Gene3D G3DSA:3.20.20.140 145 429 2.1E-209 T 19-04-2016 APA12_RS05790 e4f6177317adfa1ca8e60db8d6bb27a1 512 PANTHER PTHR11946 3 506 3.6E-237 T 19-04-2016 APA12_RS05790 e4f6177317adfa1ca8e60db8d6bb27a1 512 Pfam PF09334 tRNA synthetases class I (M) 5 363 2.5E-111 T 19-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS05790 e4f6177317adfa1ca8e60db8d6bb27a1 512 SUPERFAMILY SSF52374 3 348 2.68E-113 T 19-04-2016 APA12_RS05790 e4f6177317adfa1ca8e60db8d6bb27a1 512 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 5 483 4.5E-156 T 19-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APA12_RS05790 e4f6177317adfa1ca8e60db8d6bb27a1 512 Gene3D G3DSA:1.10.730.10 340 505 4.6E-50 T 19-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS05790 e4f6177317adfa1ca8e60db8d6bb27a1 512 Gene3D G3DSA:2.170.220.10 117 227 2.3E-45 T 19-04-2016 APA12_RS05790 e4f6177317adfa1ca8e60db8d6bb27a1 512 PANTHER PTHR11946:SF1 3 506 3.6E-237 T 19-04-2016 APA12_RS05790 e4f6177317adfa1ca8e60db8d6bb27a1 512 Gene3D G3DSA:3.40.50.620 3 113 2.5E-78 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS05790 e4f6177317adfa1ca8e60db8d6bb27a1 512 Gene3D G3DSA:3.40.50.620 228 337 2.5E-78 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS05790 e4f6177317adfa1ca8e60db8d6bb27a1 512 PRINTS PR01041 Methionyl-tRNA synthetase signature 226 237 1.2E-35 T 19-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APA12_RS05790 e4f6177317adfa1ca8e60db8d6bb27a1 512 PRINTS PR01041 Methionyl-tRNA synthetase signature 87 98 1.2E-35 T 19-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APA12_RS05790 e4f6177317adfa1ca8e60db8d6bb27a1 512 PRINTS PR01041 Methionyl-tRNA synthetase signature 350 361 1.2E-35 T 19-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APA12_RS05790 e4f6177317adfa1ca8e60db8d6bb27a1 512 PRINTS PR01041 Methionyl-tRNA synthetase signature 258 273 1.2E-35 T 19-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APA12_RS05790 e4f6177317adfa1ca8e60db8d6bb27a1 512 PRINTS PR01041 Methionyl-tRNA synthetase signature 39 53 1.2E-35 T 19-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APA12_RS05790 e4f6177317adfa1ca8e60db8d6bb27a1 512 PRINTS PR01041 Methionyl-tRNA synthetase signature 7 20 1.2E-35 T 19-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APA12_RS05790 e4f6177317adfa1ca8e60db8d6bb27a1 512 SUPERFAMILY SSF47323 351 505 1.27E-37 T 19-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS05790 e4f6177317adfa1ca8e60db8d6bb27a1 512 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 507 46.671 T 19-04-2016 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 APA12_RS07675 15b2b1713a2fc1c224c9af8f630a5e8a 813 SUPERFAMILY SSF56935 60 813 1.1E-78 T 19-04-2016 APA12_RS07675 15b2b1713a2fc1c224c9af8f630a5e8a 813 Pfam PF00593 TonB dependent receptor 532 774 1.1E-23 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS07675 15b2b1713a2fc1c224c9af8f630a5e8a 813 Gene3D G3DSA:2.170.130.10 89 200 2.0E-12 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS07675 15b2b1713a2fc1c224c9af8f630a5e8a 813 Gene3D G3DSA:2.40.170.20 201 813 6.9E-67 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS07675 15b2b1713a2fc1c224c9af8f630a5e8a 813 Pfam PF07715 TonB-dependent Receptor Plug Domain 88 187 9.4E-12 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS05075 18a4ead0a8dc9526b07c39a1264c505f 108 Pfam PF03776 Septum formation topological specificity factor MinE 13 82 6.9E-22 T 19-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 APA12_RS05075 18a4ead0a8dc9526b07c39a1264c505f 108 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 82 4.0E-20 T 19-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 APA12_RS05075 18a4ead0a8dc9526b07c39a1264c505f 108 PANTHER PTHR33404 1 82 5.4E-15 T 19-04-2016 APA12_RS05075 18a4ead0a8dc9526b07c39a1264c505f 108 Gene3D G3DSA:3.30.1070.10 34 85 5.2E-15 T 19-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 APA12_RS05075 18a4ead0a8dc9526b07c39a1264c505f 108 SUPERFAMILY SSF55229 35 82 6.67E-12 T 19-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 APA12_RS05075 18a4ead0a8dc9526b07c39a1264c505f 108 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 87 16.065 T 19-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 APA12_RS14415 a376506c0c0e88ea0343ad4fb42ef3d4 257 Gene3D G3DSA:2.40.170.20 7 250 7.6E-27 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS14415 a376506c0c0e88ea0343ad4fb42ef3d4 257 SUPERFAMILY SSF56935 3 252 5.49E-18 T 19-04-2016 APA12_RS04220 a532932a7dd7f82f05fb89bdaf877da1 469 Pfam PF13175 AAA ATPase domain 27 445 2.7E-19 T 19-04-2016 APA12_RS04220 a532932a7dd7f82f05fb89bdaf877da1 469 Gene3D G3DSA:3.40.1140.10 378 458 1.6E-17 T 19-04-2016 APA12_RS04220 a532932a7dd7f82f05fb89bdaf877da1 469 Gene3D G3DSA:3.40.1140.10 19 105 1.6E-17 T 19-04-2016 APA12_RS04220 a532932a7dd7f82f05fb89bdaf877da1 469 SUPERFAMILY SSF52540 219 455 4.5E-20 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS04220 a532932a7dd7f82f05fb89bdaf877da1 469 SUPERFAMILY SSF52540 26 85 4.5E-20 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS04220 a532932a7dd7f82f05fb89bdaf877da1 469 Gene3D G3DSA:3.40.50.300 229 300 2.9E-5 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS11825 26304dca88c59b870fb6cdca1ca4eae7 246 PANTHER PTHR24220 8 246 4.4E-126 T 19-04-2016 APA12_RS11825 26304dca88c59b870fb6cdca1ca4eae7 246 Gene3D G3DSA:3.40.50.300 4 243 6.1E-59 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS11825 26304dca88c59b870fb6cdca1ca4eae7 246 PANTHER PTHR24220:SF366 8 246 4.4E-126 T 19-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD APA12_RS11825 26304dca88c59b870fb6cdca1ca4eae7 246 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 224 245 1.0E-7 T 19-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal APA12_RS11825 26304dca88c59b870fb6cdca1ca4eae7 246 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 6 246 1.9E-113 T 19-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD APA12_RS11825 26304dca88c59b870fb6cdca1ca4eae7 246 Pfam PF00005 ABC transporter 23 176 1.5E-29 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS11825 26304dca88c59b870fb6cdca1ca4eae7 246 SUPERFAMILY SSF52540 6 244 2.77E-56 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS12190 afa0095edbbbb768ccfafd30ccc145ac 107 Pfam PF01527 Transposase 5 86 1.5E-9 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 APA12_RS12190 afa0095edbbbb768ccfafd30ccc145ac 107 PANTHER PTHR33215 1 106 9.3E-16 T 19-04-2016 APA12_RS12190 afa0095edbbbb768ccfafd30ccc145ac 107 SUPERFAMILY SSF46689 4 98 3.05E-17 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS12190 afa0095edbbbb768ccfafd30ccc145ac 107 Gene3D G3DSA:1.10.10.60 10 95 1.2E-15 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS07010 2ba9acb91e66c35f0cc208d01570316f 385 PANTHER PTHR11496 4 384 1.4E-132 T 19-04-2016 APA12_RS07010 2ba9acb91e66c35f0cc208d01570316f 385 Gene3D G3DSA:3.40.50.1970 3 182 8.6E-55 T 19-04-2016 APA12_RS07010 2ba9acb91e66c35f0cc208d01570316f 385 Pfam PF00465 Iron-containing alcohol dehydrogenase 7 376 1.1E-113 T 19-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 APA12_RS07010 2ba9acb91e66c35f0cc208d01570316f 385 Gene3D G3DSA:1.20.1090.10 183 384 3.3E-61 T 19-04-2016 APA12_RS07010 2ba9acb91e66c35f0cc208d01570316f 385 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 171 199 - T 19-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 APA12_RS07010 2ba9acb91e66c35f0cc208d01570316f 385 PANTHER PTHR11496:SF77 4 384 1.4E-132 T 19-04-2016 APA12_RS07010 2ba9acb91e66c35f0cc208d01570316f 385 SUPERFAMILY SSF56796 4 384 8.24E-118 T 19-04-2016 APA12_RS08370 69ea8cb64ad028fab55ee3a0d0df4454 491 Gene3D G3DSA:3.40.50.10260 10 229 7.4E-58 T 19-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 APA12_RS08370 69ea8cb64ad028fab55ee3a0d0df4454 491 Pfam PF03853 YjeF-related protein N-terminus 32 182 2.5E-33 T 19-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 APA12_RS08370 69ea8cb64ad028fab55ee3a0d0df4454 491 SUPERFAMILY SSF64153 10 237 3.66E-57 T 19-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 APA12_RS08370 69ea8cb64ad028fab55ee3a0d0df4454 491 Gene3D G3DSA:3.40.1190.20 230 451 1.6E-60 T 19-04-2016 IPR029056 Ribokinase-like APA12_RS08370 69ea8cb64ad028fab55ee3a0d0df4454 491 PANTHER PTHR12592:SF0 1 477 4.1E-88 T 19-04-2016 APA12_RS08370 69ea8cb64ad028fab55ee3a0d0df4454 491 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 216 487 15.503 T 19-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 APA12_RS08370 69ea8cb64ad028fab55ee3a0d0df4454 491 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 12 204 1.2E-39 T 19-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 APA12_RS08370 69ea8cb64ad028fab55ee3a0d0df4454 491 SUPERFAMILY SSF53613 221 451 9.35E-48 T 19-04-2016 IPR029056 Ribokinase-like APA12_RS08370 69ea8cb64ad028fab55ee3a0d0df4454 491 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 225 450 5.4E-45 T 19-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 APA12_RS08370 69ea8cb64ad028fab55ee3a0d0df4454 491 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 413 423 - T 19-04-2016 IPR017953 Carbohydrate kinase, predicted, conserved site APA12_RS08370 69ea8cb64ad028fab55ee3a0d0df4454 491 PANTHER PTHR12592 1 477 4.1E-88 T 19-04-2016 APA12_RS08370 69ea8cb64ad028fab55ee3a0d0df4454 491 PIRSF PIRSF017184 9 459 8.8E-98 T 19-04-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 APA12_RS08370 69ea8cb64ad028fab55ee3a0d0df4454 491 Pfam PF01256 Carbohydrate kinase 241 451 3.4E-43 T 19-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 APA12_RS08370 69ea8cb64ad028fab55ee3a0d0df4454 491 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 11 203 22.727 T 19-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 APA12_RS05575 cdebadcafbfd222ba178ac5ebd9520c2 109 SUPERFAMILY SSF109910 23 100 1.7E-19 T 19-04-2016 IPR005631 Flavinator of succinate dehydrogenase APA12_RS05575 cdebadcafbfd222ba178ac5ebd9520c2 109 PANTHER PTHR12469 20 99 2.7E-16 T 19-04-2016 APA12_RS05575 cdebadcafbfd222ba178ac5ebd9520c2 109 Pfam PF03937 Flavinator of succinate dehydrogenase 28 99 4.1E-22 T 19-04-2016 IPR005631 Flavinator of succinate dehydrogenase APA12_RS05575 cdebadcafbfd222ba178ac5ebd9520c2 109 Gene3D G3DSA:1.10.150.250 23 102 5.7E-24 T 19-04-2016 IPR005631 Flavinator of succinate dehydrogenase APA12_RS05575 cdebadcafbfd222ba178ac5ebd9520c2 109 PANTHER PTHR12469:SF3 20 99 2.7E-16 T 19-04-2016 APA12_RS05220 332fda0a8207f84c91ef6f6bbc64378f 335 PANTHER PTHR30570:SF0 23 335 1.2E-118 T 19-04-2016 APA12_RS05220 332fda0a8207f84c91ef6f6bbc64378f 335 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 29 331 1.1E-112 T 19-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 APA12_RS05220 332fda0a8207f84c91ef6f6bbc64378f 335 Gene3D G3DSA:3.40.190.10 28 170 1.3E-50 T 19-04-2016 APA12_RS05220 332fda0a8207f84c91ef6f6bbc64378f 335 Pfam PF12849 PBP superfamily domain 24 305 2.6E-56 T 19-04-2016 IPR024370 PBP domain APA12_RS05220 332fda0a8207f84c91ef6f6bbc64378f 335 PANTHER PTHR30570 23 335 1.2E-118 T 19-04-2016 APA12_RS05220 332fda0a8207f84c91ef6f6bbc64378f 335 SUPERFAMILY SSF53850 28 334 6.21E-91 T 19-04-2016 APA12_RS05220 332fda0a8207f84c91ef6f6bbc64378f 335 PIRSF PIRSF002756 5 335 1.7E-106 T 19-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 APA12_RS05220 332fda0a8207f84c91ef6f6bbc64378f 335 Gene3D G3DSA:3.40.190.10 181 328 3.1E-25 T 19-04-2016 APA12_RS06405 bb10905ad22b2743e9b778054d1ee0a6 683 PANTHER PTHR23403 90 621 2.2E-185 T 19-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APA12_RS06405 bb10905ad22b2743e9b778054d1ee0a6 683 ProSitePatterns PS00928 Trehalase signature 2. 498 507 - T 19-04-2016 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APA12_RS06405 bb10905ad22b2743e9b778054d1ee0a6 683 SUPERFAMILY SSF48208 92 594 6.21E-136 T 19-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APA12_RS06405 bb10905ad22b2743e9b778054d1ee0a6 683 ProSitePatterns PS00927 Trehalase signature 1. 202 215 - T 19-04-2016 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APA12_RS06405 bb10905ad22b2743e9b778054d1ee0a6 683 PRINTS PR00744 Glycosyl hydrolase family 37 signature 352 369 6.8E-36 T 19-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APA12_RS06405 bb10905ad22b2743e9b778054d1ee0a6 683 PRINTS PR00744 Glycosyl hydrolase family 37 signature 244 262 6.8E-36 T 19-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APA12_RS06405 bb10905ad22b2743e9b778054d1ee0a6 683 PRINTS PR00744 Glycosyl hydrolase family 37 signature 572 585 6.8E-36 T 19-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APA12_RS06405 bb10905ad22b2743e9b778054d1ee0a6 683 PRINTS PR00744 Glycosyl hydrolase family 37 signature 319 336 6.8E-36 T 19-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APA12_RS06405 bb10905ad22b2743e9b778054d1ee0a6 683 PRINTS PR00744 Glycosyl hydrolase family 37 signature 491 507 6.8E-36 T 19-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APA12_RS06405 bb10905ad22b2743e9b778054d1ee0a6 683 PRINTS PR00744 Glycosyl hydrolase family 37 signature 427 443 6.8E-36 T 19-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APA12_RS06405 bb10905ad22b2743e9b778054d1ee0a6 683 PRINTS PR00744 Glycosyl hydrolase family 37 signature 384 401 6.8E-36 T 19-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APA12_RS06405 bb10905ad22b2743e9b778054d1ee0a6 683 Pfam PF01204 Trehalase 108 588 7.3E-132 T 19-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APA12_RS06405 bb10905ad22b2743e9b778054d1ee0a6 683 PANTHER PTHR23403:SF13 90 621 2.2E-185 T 19-04-2016 APA12_RS01545 edfa0ea68a31ccf1da20ef0c5a42a93d 97 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 22 46 - T 19-04-2016 IPR001455 TusA-like domain APA12_RS01545 edfa0ea68a31ccf1da20ef0c5a42a93d 97 Gene3D G3DSA:3.30.110.40 14 91 3.8E-14 T 19-04-2016 IPR001455 TusA-like domain APA12_RS01545 edfa0ea68a31ccf1da20ef0c5a42a93d 97 Pfam PF01206 Sulfurtransferase TusA 21 90 1.9E-13 T 19-04-2016 IPR001455 TusA-like domain APA12_RS01545 edfa0ea68a31ccf1da20ef0c5a42a93d 97 SUPERFAMILY SSF64307 12 90 6.15E-15 T 19-04-2016 IPR001455 TusA-like domain APA12_RS07570 b0d893a60a7850f1cca9cbb874209c4f 413 Pfam PF00764 Arginosuccinate synthase 14 401 1.4E-152 T 19-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APA12_RS07570 b0d893a60a7850f1cca9cbb874209c4f 413 TIGRFAM TIGR00032 argG: argininosuccinate synthase 12 401 2.2E-141 T 19-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APA12_RS07570 b0d893a60a7850f1cca9cbb874209c4f 413 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 124 135 - T 19-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APA12_RS07570 b0d893a60a7850f1cca9cbb874209c4f 413 SUPERFAMILY SSF52402 11 174 5.73E-48 T 19-04-2016 APA12_RS07570 b0d893a60a7850f1cca9cbb874209c4f 413 Gene3D G3DSA:3.40.50.620 11 178 5.6E-66 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS07570 b0d893a60a7850f1cca9cbb874209c4f 413 PANTHER PTHR11587 4 413 5.4E-230 T 19-04-2016 APA12_RS07570 b0d893a60a7850f1cca9cbb874209c4f 413 SUPERFAMILY SSF69864 183 406 1.7E-89 T 19-04-2016 APA12_RS07570 b0d893a60a7850f1cca9cbb874209c4f 413 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 16 24 - T 19-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APA12_RS07570 b0d893a60a7850f1cca9cbb874209c4f 413 Hamap MF_00005 Argininosuccinate synthase [argG]. 10 408 51.893 T 19-04-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APA12_RS07570 b0d893a60a7850f1cca9cbb874209c4f 413 Gene3D G3DSA:3.90.1260.10 184 408 9.1E-96 T 19-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APA12_RS07570 b0d893a60a7850f1cca9cbb874209c4f 413 PANTHER PTHR11587:SF2 4 413 5.4E-230 T 19-04-2016 APA12_RS00430 deebfb6cfebaa555e8afc4f159b632ff 193 SMART SM00986 29 184 2.8E-22 T 19-04-2016 IPR005122 Uracil-DNA glycosylase-like APA12_RS00430 deebfb6cfebaa555e8afc4f159b632ff 193 SMART SM00987 29 184 2.8E-22 T 19-04-2016 APA12_RS00430 deebfb6cfebaa555e8afc4f159b632ff 193 PANTHER PTHR42160 1 193 3.1E-65 T 19-04-2016 APA12_RS00430 deebfb6cfebaa555e8afc4f159b632ff 193 Gene3D G3DSA:3.40.470.10 5 191 1.1E-36 T 19-04-2016 IPR005122 Uracil-DNA glycosylase-like APA12_RS00430 deebfb6cfebaa555e8afc4f159b632ff 193 Pfam PF03167 Uracil DNA glycosylase superfamily 32 183 2.3E-22 T 19-04-2016 IPR005122 Uracil-DNA glycosylase-like APA12_RS00430 deebfb6cfebaa555e8afc4f159b632ff 193 SUPERFAMILY SSF52141 5 190 5.23E-48 T 19-04-2016 IPR005122 Uracil-DNA glycosylase-like APA12_RS00430 deebfb6cfebaa555e8afc4f159b632ff 193 PANTHER PTHR42160:SF1 1 193 3.1E-65 T 19-04-2016 APA12_RS00725 2c484660fa21d995e70912f88b84bc27 68 PANTHER PTHR11544 1 56 2.1E-21 T 19-04-2016 APA12_RS00725 2c484660fa21d995e70912f88b84bc27 68 PRINTS PR00050 Cold shock protein signature 25 34 1.9E-13 T 19-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APA12_RS00725 2c484660fa21d995e70912f88b84bc27 68 PRINTS PR00050 Cold shock protein signature 40 58 1.9E-13 T 19-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APA12_RS00725 2c484660fa21d995e70912f88b84bc27 68 PRINTS PR00050 Cold shock protein signature 4 19 1.9E-13 T 19-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APA12_RS00725 2c484660fa21d995e70912f88b84bc27 68 Gene3D G3DSA:2.40.50.140 1 66 5.5E-28 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS00725 2c484660fa21d995e70912f88b84bc27 68 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 3.2E-23 T 19-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APA12_RS00725 2c484660fa21d995e70912f88b84bc27 68 PIRSF PIRSF002599 1 68 6.1E-21 T 19-04-2016 IPR012156 Cold shock, CspA GO:0003676 APA12_RS00725 2c484660fa21d995e70912f88b84bc27 68 SMART SM00357 3 68 1.3E-22 T 19-04-2016 IPR011129 Cold shock protein GO:0003676 APA12_RS00725 2c484660fa21d995e70912f88b84bc27 68 SUPERFAMILY SSF50249 1 67 4.76E-23 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS03790 36cfbfaff6fa82da1f6bffec8de05d55 676 SMART SM00955 260 545 8.2E-102 T 19-04-2016 APA12_RS03790 36cfbfaff6fa82da1f6bffec8de05d55 676 ProSitePatterns PS01175 Ribonuclease II family signature. 512 536 - T 19-04-2016 IPR022966 Ribonuclease II/R, conserved site APA12_RS03790 36cfbfaff6fa82da1f6bffec8de05d55 676 Pfam PF00773 RNB domain 502 541 2.6E-13 T 19-04-2016 APA12_RS03790 36cfbfaff6fa82da1f6bffec8de05d55 676 Pfam PF00773 RNB domain 260 498 1.1E-62 T 19-04-2016 APA12_RS03790 36cfbfaff6fa82da1f6bffec8de05d55 676 PANTHER PTHR23355 203 615 7.1E-97 T 19-04-2016 APA12_RS03790 36cfbfaff6fa82da1f6bffec8de05d55 676 SUPERFAMILY SSF50249 197 589 1.14E-102 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS03400 ef78f8c3dc54fa2da19d4faba6da0aea 312 SUPERFAMILY SSF50486 201 304 9.89E-30 T 19-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 APA12_RS03400 ef78f8c3dc54fa2da19d4faba6da0aea 312 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 296 1.0E-86 T 19-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APA12_RS03400 ef78f8c3dc54fa2da19d4faba6da0aea 312 Gene3D G3DSA:3.40.50.170 1 201 2.7E-69 T 19-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APA12_RS03400 ef78f8c3dc54fa2da19d4faba6da0aea 312 Gene3D G3DSA:3.10.25.10 204 305 2.8E-32 T 19-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APA12_RS03400 ef78f8c3dc54fa2da19d4faba6da0aea 312 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 299 36.005 T 19-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APA12_RS03400 ef78f8c3dc54fa2da19d4faba6da0aea 312 SUPERFAMILY SSF53328 1 202 6.41E-61 T 19-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APA12_RS03400 ef78f8c3dc54fa2da19d4faba6da0aea 312 Pfam PF02911 Formyl transferase, C-terminal domain 201 296 2.9E-25 T 19-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APA12_RS03400 ef78f8c3dc54fa2da19d4faba6da0aea 312 Pfam PF00551 Formyl transferase 1 179 1.6E-42 T 19-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APA12_RS03400 ef78f8c3dc54fa2da19d4faba6da0aea 312 PANTHER PTHR11138 1 295 1.0E-105 T 19-04-2016 APA12_RS03400 ef78f8c3dc54fa2da19d4faba6da0aea 312 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 133 156 - T 19-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APA12_RS11950 6976747593f29119fee01b10d19bb75c 161 Gene3D G3DSA:1.20.1260.10 2 153 4.7E-60 T 19-04-2016 IPR012347 Ferritin-related APA12_RS11950 6976747593f29119fee01b10d19bb75c 161 TIGRFAM TIGR00754 bfr: bacterioferritin 1 151 1.5E-63 T 19-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APA12_RS11950 6976747593f29119fee01b10d19bb75c 161 PRINTS PR00601 Bacterioferritin signature 128 149 2.6E-60 T 19-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APA12_RS11950 6976747593f29119fee01b10d19bb75c 161 PRINTS PR00601 Bacterioferritin signature 107 127 2.6E-60 T 19-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APA12_RS11950 6976747593f29119fee01b10d19bb75c 161 PRINTS PR00601 Bacterioferritin signature 65 85 2.6E-60 T 19-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APA12_RS11950 6976747593f29119fee01b10d19bb75c 161 PRINTS PR00601 Bacterioferritin signature 3 22 2.6E-60 T 19-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APA12_RS11950 6976747593f29119fee01b10d19bb75c 161 PRINTS PR00601 Bacterioferritin signature 23 43 2.6E-60 T 19-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APA12_RS11950 6976747593f29119fee01b10d19bb75c 161 PRINTS PR00601 Bacterioferritin signature 44 64 2.6E-60 T 19-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APA12_RS11950 6976747593f29119fee01b10d19bb75c 161 PRINTS PR00601 Bacterioferritin signature 86 106 2.6E-60 T 19-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APA12_RS11950 6976747593f29119fee01b10d19bb75c 161 SUPERFAMILY SSF47240 1 152 1.2E-49 T 19-04-2016 IPR009078 Ferritin-like superfamily APA12_RS11950 6976747593f29119fee01b10d19bb75c 161 Pfam PF00210 Ferritin-like domain 8 144 8.5E-39 T 19-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 APA12_RS11950 6976747593f29119fee01b10d19bb75c 161 PANTHER PTHR30295 6 151 2.9E-42 T 19-04-2016 APA12_RS11950 6976747593f29119fee01b10d19bb75c 161 PIRSF PIRSF002560 1 157 4.0E-65 T 19-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APA12_RS13455 2988dcc11f69f15387e825523a283b96 198 SUPERFAMILY SSF55469 1 181 9.42E-34 T 19-04-2016 IPR000415 Nitroreductase-like GO:0016491 APA12_RS13455 2988dcc11f69f15387e825523a283b96 198 Pfam PF00881 Nitroreductase family 8 163 9.0E-19 T 19-04-2016 IPR029479 Nitroreductase APA12_RS13455 2988dcc11f69f15387e825523a283b96 198 PANTHER PTHR23026:SF107 1 190 5.3E-40 T 19-04-2016 APA12_RS13455 2988dcc11f69f15387e825523a283b96 198 Gene3D G3DSA:3.40.109.10 4 183 1.4E-35 T 19-04-2016 IPR000415 Nitroreductase-like GO:0016491 APA12_RS13455 2988dcc11f69f15387e825523a283b96 198 PANTHER PTHR23026 1 190 5.3E-40 T 19-04-2016 APA12_RS13455 2988dcc11f69f15387e825523a283b96 198 PIRSF PIRSF000232 1 187 6.7E-58 T 19-04-2016 IPR026021 Putative NAD(P)H nitroreductase YdjA-like KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- APA12_RS07380 f45d7ccb8bab9bed82112249c99032f5 311 Pfam PF02954 Bacterial regulatory protein, Fis family 271 306 6.2E-13 T 19-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APA12_RS07380 f45d7ccb8bab9bed82112249c99032f5 311 SUPERFAMILY SSF55781 58 200 7.29E-9 T 19-04-2016 IPR029016 GAF domain-like APA12_RS07380 f45d7ccb8bab9bed82112249c99032f5 311 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 274 291 8.3E-11 T 19-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APA12_RS07380 f45d7ccb8bab9bed82112249c99032f5 311 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 291 311 8.3E-11 T 19-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APA12_RS07380 f45d7ccb8bab9bed82112249c99032f5 311 Gene3D G3DSA:1.10.10.60 263 311 2.7E-15 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS07380 f45d7ccb8bab9bed82112249c99032f5 311 SUPERFAMILY SSF46689 259 310 1.27E-12 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS07380 f45d7ccb8bab9bed82112249c99032f5 311 Gene3D G3DSA:3.30.450.40 151 200 1.6E-5 T 19-04-2016 IPR029016 GAF domain-like APA12_RS07380 f45d7ccb8bab9bed82112249c99032f5 311 PANTHER PTHR32071 265 311 2.3E-13 T 19-04-2016 APA12_RS07155 01ebe4054229515004f045b74d4ed371 476 SUPERFAMILY SSF51679 6 439 2.09E-112 T 19-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APA12_RS07155 01ebe4054229515004f045b74d4ed371 476 Gene3D G3DSA:3.20.20.30 5 318 1.9E-121 T 19-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APA12_RS07155 01ebe4054229515004f045b74d4ed371 476 Gene3D G3DSA:3.20.20.30 351 438 1.9E-121 T 19-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APA12_RS07155 01ebe4054229515004f045b74d4ed371 476 PIRSF PIRSF000337 6 448 1.6E-127 T 19-04-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 APA12_RS07155 01ebe4054229515004f045b74d4ed371 476 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 11 435 2.1E-144 T 19-04-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 APA12_RS07155 01ebe4054229515004f045b74d4ed371 476 PANTHER PTHR30011 2 455 7.7E-178 T 19-04-2016 APA12_RS07155 01ebe4054229515004f045b74d4ed371 476 Pfam PF00296 Luciferase-like monooxygenase 23 385 1.4E-57 T 19-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APA12_RS07155 01ebe4054229515004f045b74d4ed371 476 PANTHER PTHR30011:SF16 2 455 7.7E-178 T 19-04-2016 APA12_RS03030 51487ae2d2083d352468da5e41d3971b 427 Gene3D G3DSA:3.50.50.60 2 121 3.0E-18 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS03030 51487ae2d2083d352468da5e41d3971b 427 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 330 6.5E-59 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS03030 51487ae2d2083d352468da5e41d3971b 427 SUPERFAMILY SSF51905 1 338 4.17E-35 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS03030 51487ae2d2083d352468da5e41d3971b 427 Gene3D G3DSA:3.50.50.60 122 337 1.1E-33 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS03030 51487ae2d2083d352468da5e41d3971b 427 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 114 132 1.7E-14 T 19-04-2016 APA12_RS03030 51487ae2d2083d352468da5e41d3971b 427 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 1.7E-14 T 19-04-2016 APA12_RS03030 51487ae2d2083d352468da5e41d3971b 427 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 1.7E-14 T 19-04-2016 APA12_RS03030 51487ae2d2083d352468da5e41d3971b 427 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.7E-14 T 19-04-2016 APA12_RS03030 51487ae2d2083d352468da5e41d3971b 427 PANTHER PTHR22912 1 337 5.4E-25 T 19-04-2016 APA12_RS08955 2bdd5705756ccf9929ebd80c2170b427 112 SMART SM00938 4 105 8.4E-60 T 19-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APA12_RS08955 2bdd5705756ccf9929ebd80c2170b427 112 Gene3D G3DSA:3.30.70.120 1 112 3.7E-48 T 19-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal APA12_RS08955 2bdd5705756ccf9929ebd80c2170b427 112 PRINTS PR00340 P-II protein signature 23 41 1.9E-41 T 19-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APA12_RS08955 2bdd5705756ccf9929ebd80c2170b427 112 PRINTS PR00340 P-II protein signature 52 75 1.9E-41 T 19-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APA12_RS08955 2bdd5705756ccf9929ebd80c2170b427 112 PRINTS PR00340 P-II protein signature 2 17 1.9E-41 T 19-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APA12_RS08955 2bdd5705756ccf9929ebd80c2170b427 112 PRINTS PR00340 P-II protein signature 83 103 1.9E-41 T 19-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APA12_RS08955 2bdd5705756ccf9929ebd80c2170b427 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 19-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 APA12_RS08955 2bdd5705756ccf9929ebd80c2170b427 112 PIRSF PIRSF039144 1 112 9.4E-54 T 19-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APA12_RS08955 2bdd5705756ccf9929ebd80c2170b427 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 19-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 APA12_RS08955 2bdd5705756ccf9929ebd80c2170b427 112 SUPERFAMILY SSF54913 1 112 7.31E-43 T 19-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta APA12_RS08955 2bdd5705756ccf9929ebd80c2170b427 112 PANTHER PTHR30115 1 112 7.3E-64 T 19-04-2016 APA12_RS08955 2bdd5705756ccf9929ebd80c2170b427 112 PANTHER PTHR30115:SF12 1 112 7.3E-64 T 19-04-2016 APA12_RS08955 2bdd5705756ccf9929ebd80c2170b427 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 5.5E-41 T 19-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APA12_RS02685 c1fc114095badae492f55689d6c32c3f 461 SUPERFAMILY SSF53098 155 398 3.03E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS02685 c1fc114095badae492f55689d6c32c3f 461 Pfam PF13701 Transposase DDE domain group 1 13 458 2.7E-165 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS00675 c1fc114095badae492f55689d6c32c3f 461 SUPERFAMILY SSF53098 155 398 3.03E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS00675 c1fc114095badae492f55689d6c32c3f 461 Pfam PF13701 Transposase DDE domain group 1 13 458 2.7E-165 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS02185 c1fc114095badae492f55689d6c32c3f 461 SUPERFAMILY SSF53098 155 398 3.03E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS02185 c1fc114095badae492f55689d6c32c3f 461 Pfam PF13701 Transposase DDE domain group 1 13 458 2.7E-165 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS07855 c1fc114095badae492f55689d6c32c3f 461 SUPERFAMILY SSF53098 155 398 3.03E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS07855 c1fc114095badae492f55689d6c32c3f 461 Pfam PF13701 Transposase DDE domain group 1 13 458 2.7E-165 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS12030 c1fc114095badae492f55689d6c32c3f 461 SUPERFAMILY SSF53098 155 398 3.03E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS12030 c1fc114095badae492f55689d6c32c3f 461 Pfam PF13701 Transposase DDE domain group 1 13 458 2.7E-165 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS11540 d80f0a8852d591de4ed51ad615d15fb2 189 Gene3D G3DSA:3.40.50.1390 1 124 4.0E-40 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APA12_RS11540 d80f0a8852d591de4ed51ad615d15fb2 189 Pfam PF02796 Helix-turn-helix domain of resolvase 143 185 5.7E-9 T 19-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 APA12_RS11540 d80f0a8852d591de4ed51ad615d15fb2 189 SUPERFAMILY SSF53041 1 141 1.7E-42 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APA12_RS11540 d80f0a8852d591de4ed51ad615d15fb2 189 PANTHER PTHR30461:SF9 3 181 1.2E-58 T 19-04-2016 APA12_RS11540 d80f0a8852d591de4ed51ad615d15fb2 189 Pfam PF00239 Resolvase, N terminal domain 3 141 4.1E-43 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APA12_RS11540 d80f0a8852d591de4ed51ad615d15fb2 189 SUPERFAMILY SSF46689 143 184 3.99E-6 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS11540 d80f0a8852d591de4ed51ad615d15fb2 189 PANTHER PTHR30461 3 181 1.2E-58 T 19-04-2016 APA12_RS11540 d80f0a8852d591de4ed51ad615d15fb2 189 SMART SM00857 2 141 6.7E-56 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APA12_RS11540 d80f0a8852d591de4ed51ad615d15fb2 189 Gene3D G3DSA:1.10.10.60 141 185 1.3E-14 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS08410 507822058b201d61c6893e8ef54803d3 415 Gene3D G3DSA:3.90.1150.10 294 407 1.1E-28 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APA12_RS08410 507822058b201d61c6893e8ef54803d3 415 Pfam PF00266 Aminotransferase class-V 34 403 1.3E-142 T 19-04-2016 IPR000192 Aminotransferase class V domain APA12_RS08410 507822058b201d61c6893e8ef54803d3 415 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 16 414 4.2E-168 T 19-04-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 APA12_RS08410 507822058b201d61c6893e8ef54803d3 415 Gene3D G3DSA:3.40.640.10 45 293 1.0E-82 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APA12_RS08410 507822058b201d61c6893e8ef54803d3 415 PANTHER PTHR11601 17 414 1.6E-177 T 19-04-2016 APA12_RS08410 507822058b201d61c6893e8ef54803d3 415 PANTHER PTHR11601:SF17 17 414 1.6E-177 T 19-04-2016 APA12_RS08410 507822058b201d61c6893e8ef54803d3 415 SUPERFAMILY SSF53383 13 411 1.38E-120 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APA12_RS09670 4549a6c3e2a12dec0121e3d51a6796d7 504 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 18 179 8.1E-42 T 19-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APA12_RS09670 4549a6c3e2a12dec0121e3d51a6796d7 504 SMART SM00864 18 210 5.0E-105 T 19-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APA12_RS09670 4549a6c3e2a12dec0121e3d51a6796d7 504 Gene3D G3DSA:3.30.1330.20 220 324 6.8E-46 T 19-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain APA12_RS09670 4549a6c3e2a12dec0121e3d51a6796d7 504 ProSitePatterns PS01135 FtsZ protein signature 2. 102 123 - T 19-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 APA12_RS09670 4549a6c3e2a12dec0121e3d51a6796d7 504 Gene3D G3DSA:3.40.50.1440 18 219 4.0E-90 T 19-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APA12_RS09670 4549a6c3e2a12dec0121e3d51a6796d7 504 Pfam PF12327 FtsZ family, C-terminal domain 227 322 3.4E-35 T 19-04-2016 IPR024757 Cell division protein FtsZ, C-terminal APA12_RS09670 4549a6c3e2a12dec0121e3d51a6796d7 504 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 14 350 36.265 T 19-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 APA12_RS09670 4549a6c3e2a12dec0121e3d51a6796d7 504 PANTHER PTHR30314:SF3 17 380 2.2E-169 T 19-04-2016 APA12_RS09670 4549a6c3e2a12dec0121e3d51a6796d7 504 ProSitePatterns PS01134 FtsZ protein signature 1. 49 83 - T 19-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 APA12_RS09670 4549a6c3e2a12dec0121e3d51a6796d7 504 SUPERFAMILY SSF55307 210 323 1.05E-40 T 19-04-2016 IPR008280 Tubulin/FtsZ, C-terminal APA12_RS09670 4549a6c3e2a12dec0121e3d51a6796d7 504 SUPERFAMILY SSF52490 17 213 8.24E-67 T 19-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APA12_RS09670 4549a6c3e2a12dec0121e3d51a6796d7 504 PANTHER PTHR30314 17 380 2.2E-169 T 19-04-2016 APA12_RS09670 4549a6c3e2a12dec0121e3d51a6796d7 504 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 16 328 8.9E-121 T 19-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 APA12_RS09670 4549a6c3e2a12dec0121e3d51a6796d7 504 PRINTS PR00423 Cell division protein FtsZ signature 103 123 4.0E-46 T 19-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APA12_RS09670 4549a6c3e2a12dec0121e3d51a6796d7 504 PRINTS PR00423 Cell division protein FtsZ signature 131 152 4.0E-46 T 19-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APA12_RS09670 4549a6c3e2a12dec0121e3d51a6796d7 504 PRINTS PR00423 Cell division protein FtsZ signature 194 216 4.0E-46 T 19-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APA12_RS09670 4549a6c3e2a12dec0121e3d51a6796d7 504 PRINTS PR00423 Cell division protein FtsZ signature 217 238 4.0E-46 T 19-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APA12_RS09670 4549a6c3e2a12dec0121e3d51a6796d7 504 SMART SM00865 212 330 5.3E-51 T 19-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain APA12_RS12750 67fcb1ff9b470ba265ed1c6a55cfa074 222 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 8 218 3.4E-62 T 19-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria APA12_RS12750 67fcb1ff9b470ba265ed1c6a55cfa074 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 8.97E-52 T 19-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 APA12_RS12750 67fcb1ff9b470ba265ed1c6a55cfa074 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 8.97E-52 T 19-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 APA12_RS12750 67fcb1ff9b470ba265ed1c6a55cfa074 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 158 177 8.97E-52 T 19-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 APA12_RS12750 67fcb1ff9b470ba265ed1c6a55cfa074 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 8.97E-52 T 19-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 APA12_RS12750 67fcb1ff9b470ba265ed1c6a55cfa074 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 8.97E-52 T 19-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 APA12_RS12750 67fcb1ff9b470ba265ed1c6a55cfa074 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 8.97E-52 T 19-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 APA12_RS12750 67fcb1ff9b470ba265ed1c6a55cfa074 222 PANTHER PTHR30070:SF1 2 222 3.3E-52 T 19-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 APA12_RS12750 67fcb1ff9b470ba265ed1c6a55cfa074 222 Pfam PF03379 CcmB protein 5 218 1.0E-63 T 19-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 APA12_RS12750 67fcb1ff9b470ba265ed1c6a55cfa074 222 PANTHER PTHR30070 2 222 3.3E-52 T 19-04-2016 APA12_RS12750 67fcb1ff9b470ba265ed1c6a55cfa074 222 PIRSF PIRSF002764 1 222 3.9E-73 T 19-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria APA12_RS06470 51312313036e5a9351257bb899d9cd7b 779 Pfam PF07715 TonB-dependent Receptor Plug Domain 102 206 2.0E-12 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS06470 51312313036e5a9351257bb899d9cd7b 779 SUPERFAMILY SSF56935 80 769 3.66E-72 T 19-04-2016 APA12_RS06470 51312313036e5a9351257bb899d9cd7b 779 Gene3D G3DSA:2.170.130.10 101 206 2.2E-12 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS06470 51312313036e5a9351257bb899d9cd7b 779 Gene3D G3DSA:2.40.170.20 207 766 1.0E-56 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS04910 c04f11f50a4a67e31f2158abc9534806 931 Pfam PF07584 Aerotolerance regulator N-terminal 1 75 4.4E-17 T 19-04-2016 IPR024163 Aerotolerance regulator, N-terminal APA12_RS04910 c04f11f50a4a67e31f2158abc9534806 931 Gene3D G3DSA:3.40.50.880 368 509 1.3E-4 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like APA12_RS04910 c04f11f50a4a67e31f2158abc9534806 931 TIGRFAM TIGR02226 two_anch: N-terminal double-transmembrane domain 1 80 2.7E-18 T 19-04-2016 IPR011933 Double transmembrane domain APA12_RS04910 c04f11f50a4a67e31f2158abc9534806 931 Pfam PF13709 Domain of unknown function (DUF4159) 696 909 1.7E-52 T 19-04-2016 IPR025297 Domain of unknown function DUF4159 APA12_RS04910 c04f11f50a4a67e31f2158abc9534806 931 SUPERFAMILY SSF52317 356 524 2.52E-9 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like APA12_RS07000 531001b5416415b665eb08f80ee09750 504 Gene3D G3DSA:3.20.20.140 20 188 3.1E-42 T 19-04-2016 APA12_RS07000 531001b5416415b665eb08f80ee09750 504 Gene3D G3DSA:3.20.20.140 342 399 3.1E-42 T 19-04-2016 APA12_RS07000 531001b5416415b665eb08f80ee09750 504 SUPERFAMILY SSF51556 305 413 2.45E-15 T 19-04-2016 IPR032466 Metal-dependent hydrolase APA12_RS07000 531001b5416415b665eb08f80ee09750 504 SUPERFAMILY SSF51556 21 168 2.45E-15 T 19-04-2016 IPR032466 Metal-dependent hydrolase APA12_RS07000 531001b5416415b665eb08f80ee09750 504 SUPERFAMILY SSF51338 415 479 4.94E-7 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APA12_RS07000 531001b5416415b665eb08f80ee09750 504 Pfam PF01979 Amidohydrolase family 396 473 1.3E-5 T 19-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APA12_RS07000 531001b5416415b665eb08f80ee09750 504 Gene3D G3DSA:2.30.40.10 400 493 1.9E-15 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APA12_RS05215 8fb61d70496bd6d5e8798d5d5a2c2a77 819 Gene3D G3DSA:3.30.56.10 157 184 6.4E-23 T 19-04-2016 APA12_RS05215 8fb61d70496bd6d5e8798d5d5a2c2a77 819 Gene3D G3DSA:3.30.56.10 1 38 6.4E-23 T 19-04-2016 APA12_RS05215 8fb61d70496bd6d5e8798d5d5a2c2a77 819 Pfam PF03484 tRNA synthetase B5 domain 406 497 6.6E-11 T 19-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 APA12_RS05215 8fb61d70496bd6d5e8798d5d5a2c2a77 819 Gene3D G3DSA:3.30.930.10 517 713 4.7E-45 T 19-04-2016 APA12_RS05215 8fb61d70496bd6d5e8798d5d5a2c2a77 819 Pfam PF03147 Ferredoxin-fold anticodon binding domain 726 819 4.3E-24 T 19-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 APA12_RS05215 8fb61d70496bd6d5e8798d5d5a2c2a77 819 SUPERFAMILY SSF56037 203 397 6.54E-67 T 19-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 APA12_RS05215 8fb61d70496bd6d5e8798d5d5a2c2a77 819 Gene3D G3DSA:2.40.50.140 41 156 2.8E-38 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS05215 8fb61d70496bd6d5e8798d5d5a2c2a77 819 SMART SM00873 214 386 6.5E-83 T 19-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 APA12_RS05215 8fb61d70496bd6d5e8798d5d5a2c2a77 819 SUPERFAMILY SSF50249 36 192 2.09E-41 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS05215 8fb61d70496bd6d5e8798d5d5a2c2a77 819 Gene3D G3DSA:3.30.56.20 402 502 5.8E-21 T 19-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 APA12_RS05215 8fb61d70496bd6d5e8798d5d5a2c2a77 819 Gene3D G3DSA:3.30.70.380 728 819 1.3E-26 T 19-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 APA12_RS05215 8fb61d70496bd6d5e8798d5d5a2c2a77 819 Pfam PF01588 Putative tRNA binding domain 47 147 8.5E-20 T 19-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 APA12_RS05215 8fb61d70496bd6d5e8798d5d5a2c2a77 819 SMART SM00896 726 819 1.1E-39 T 19-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 APA12_RS05215 8fb61d70496bd6d5e8798d5d5a2c2a77 819 SUPERFAMILY SSF54991 724 819 3.4E-26 T 19-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 APA12_RS05215 8fb61d70496bd6d5e8798d5d5a2c2a77 819 PANTHER PTHR10947:SF0 483 819 8.2E-220 T 19-04-2016 APA12_RS05215 8fb61d70496bd6d5e8798d5d5a2c2a77 819 PANTHER PTHR10947:SF0 2 455 8.2E-220 T 19-04-2016 APA12_RS05215 8fb61d70496bd6d5e8798d5d5a2c2a77 819 PANTHER PTHR10947 483 819 8.2E-220 T 19-04-2016 APA12_RS05215 8fb61d70496bd6d5e8798d5d5a2c2a77 819 PANTHER PTHR10947 2 455 8.2E-220 T 19-04-2016 APA12_RS05215 8fb61d70496bd6d5e8798d5d5a2c2a77 819 SUPERFAMILY SSF55681 494 710 4.97E-35 T 19-04-2016 APA12_RS05215 8fb61d70496bd6d5e8798d5d5a2c2a77 819 Pfam PF03483 B3/4 domain 214 386 1.0E-60 T 19-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 APA12_RS05215 8fb61d70496bd6d5e8798d5d5a2c2a77 819 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 813 37.974 T 19-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 APA12_RS05215 8fb61d70496bd6d5e8798d5d5a2c2a77 819 SUPERFAMILY SSF46955 405 457 3.75E-6 T 19-04-2016 IPR009061 Putative DNA-binding domain APA12_RS05215 8fb61d70496bd6d5e8798d5d5a2c2a77 819 Gene3D G3DSA:3.50.40.10 201 393 1.2E-76 T 19-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 APA12_RS05215 8fb61d70496bd6d5e8798d5d5a2c2a77 819 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 457 5.4E-136 T 19-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 APA12_RS05215 8fb61d70496bd6d5e8798d5d5a2c2a77 819 SMART SM00874 402 498 1.4E-15 T 19-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 APA12_RS12155 bc884bd361e71af9433eb7fa92cbb01c 288 SUPERFAMILY SSF53041 3 145 1.44E-27 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APA12_RS12155 bc884bd361e71af9433eb7fa92cbb01c 288 Pfam PF00239 Resolvase, N terminal domain 4 145 6.0E-27 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APA12_RS12155 bc884bd361e71af9433eb7fa92cbb01c 288 PANTHER PTHR30461 3 280 3.6E-64 T 19-04-2016 APA12_RS12155 bc884bd361e71af9433eb7fa92cbb01c 288 PANTHER PTHR30461:SF5 3 280 3.6E-64 T 19-04-2016 APA12_RS12155 bc884bd361e71af9433eb7fa92cbb01c 288 Pfam PF07508 Recombinase 176 279 7.1E-19 T 19-04-2016 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 APA12_RS12155 bc884bd361e71af9433eb7fa92cbb01c 288 SMART SM00857 4 146 1.1E-39 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APA12_RS12155 bc884bd361e71af9433eb7fa92cbb01c 288 Gene3D G3DSA:3.40.50.1390 3 111 4.5E-22 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APA12_RS01180 3b4736d4f610d4aafebec771594f3dca 448 PANTHER PTHR10788 3 448 4.1E-173 T 19-04-2016 APA12_RS01180 3b4736d4f610d4aafebec771594f3dca 448 SUPERFAMILY SSF53756 2 445 2.89E-142 T 19-04-2016 APA12_RS01180 3b4736d4f610d4aafebec771594f3dca 448 Pfam PF00982 Glycosyltransferase family 20 18 443 3.0E-126 T 19-04-2016 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 APA12_RS01180 3b4736d4f610d4aafebec771594f3dca 448 Gene3D G3DSA:3.40.50.2000 226 424 4.7E-73 T 19-04-2016 APA12_RS01180 3b4736d4f610d4aafebec771594f3dca 448 Gene3D G3DSA:3.40.50.2000 2 225 4.7E-64 T 19-04-2016 APA12_RS01180 3b4736d4f610d4aafebec771594f3dca 448 PANTHER PTHR10788:SF6 3 448 4.1E-173 T 19-04-2016 APA12_RS05440 d3a51d064e321811a9d8aaca0225792d 350 PANTHER PTHR30473 1 350 9.6E-150 T 19-04-2016 APA12_RS05440 d3a51d064e321811a9d8aaca0225792d 350 PANTHER PTHR30473:SF1 1 350 9.6E-150 T 19-04-2016 APA12_RS05440 d3a51d064e321811a9d8aaca0225792d 350 Pfam PF02562 PhoH-like protein 124 327 4.2E-91 T 19-04-2016 IPR003714 PhoH-like protein GO:0005524 APA12_RS05440 d3a51d064e321811a9d8aaca0225792d 350 Gene3D G3DSA:3.40.50.300 123 326 9.4E-86 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05440 d3a51d064e321811a9d8aaca0225792d 350 SUPERFAMILY SSF52540 123 299 1.9E-38 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05095 e787133bc7efded5798e5e2759b6ca42 404 Gene3D G3DSA:2.40.30.10 194 273 1.7E-29 T 19-04-2016 APA12_RS05095 e787133bc7efded5798e5e2759b6ca42 404 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 12 395 6.2E-117 T 19-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like APA12_RS05095 e787133bc7efded5798e5e2759b6ca42 404 SUPERFAMILY SSF160996 195 344 1.31E-36 T 19-04-2016 APA12_RS05095 e787133bc7efded5798e5e2759b6ca42 404 Gene3D G3DSA:3.50.50.60 11 192 8.0E-51 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS05095 e787133bc7efded5798e5e2759b6ca42 404 Gene3D G3DSA:3.50.50.60 343 400 8.0E-51 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS05095 e787133bc7efded5798e5e2759b6ca42 404 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 351 373 2.3E-5 T 19-04-2016 APA12_RS05095 e787133bc7efded5798e5e2759b6ca42 404 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 2.3E-5 T 19-04-2016 APA12_RS05095 e787133bc7efded5798e5e2759b6ca42 404 Pfam PF03486 HI0933-like protein 11 396 3.4E-133 T 19-04-2016 APA12_RS05095 e787133bc7efded5798e5e2759b6ca42 404 PANTHER PTHR10617 10 291 5.3E-104 T 19-04-2016 APA12_RS05095 e787133bc7efded5798e5e2759b6ca42 404 PANTHER PTHR10617 334 401 5.3E-104 T 19-04-2016 APA12_RS05095 e787133bc7efded5798e5e2759b6ca42 404 SUPERFAMILY SSF51905 11 194 8.35E-56 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS05095 e787133bc7efded5798e5e2759b6ca42 404 SUPERFAMILY SSF51905 341 400 8.35E-56 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS05095 e787133bc7efded5798e5e2759b6ca42 404 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 161 170 2.2E-8 T 19-04-2016 APA12_RS05095 e787133bc7efded5798e5e2759b6ca42 404 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 366 373 2.2E-8 T 19-04-2016 APA12_RS05095 e787133bc7efded5798e5e2759b6ca42 404 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 2.2E-8 T 19-04-2016 APA12_RS05095 e787133bc7efded5798e5e2759b6ca42 404 PANTHER PTHR10617:SF103 10 291 5.3E-104 T 19-04-2016 APA12_RS05095 e787133bc7efded5798e5e2759b6ca42 404 PANTHER PTHR10617:SF103 334 401 5.3E-104 T 19-04-2016 APA12_RS05095 e787133bc7efded5798e5e2759b6ca42 404 Gene3D G3DSA:1.10.8.260 274 323 5.0E-7 T 19-04-2016 IPR023166 HI0933 insert-like domain APA12_RS01425 6c1e5e24fbe9c650bced66bc1e1c80b3 305 Gene3D G3DSA:3.40.50.300 9 292 1.3E-90 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS01425 6c1e5e24fbe9c650bced66bc1e1c80b3 305 SUPERFAMILY SSF52540 69 272 2.3E-17 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS01425 6c1e5e24fbe9c650bced66bc1e1c80b3 305 TIGRFAM TIGR03709 PPK2_rel_1: polyphosphate:nucleotide phosphotransferase, PPK2 family 12 283 3.7E-104 T 19-04-2016 IPR022300 Polyphosphate:nucleotide phosphotransferase, PPK2 GO:0006797|GO:0016776 APA12_RS01425 6c1e5e24fbe9c650bced66bc1e1c80b3 305 PIRSF PIRSF028756 10 302 1.0E-75 T 19-04-2016 IPR016898 Polyphosphate kinase 2 APA12_RS01425 6c1e5e24fbe9c650bced66bc1e1c80b3 305 PANTHER PTHR34383 32 304 4.7E-111 T 19-04-2016 APA12_RS01425 6c1e5e24fbe9c650bced66bc1e1c80b3 305 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 40 270 1.5E-65 T 19-04-2016 IPR022488 Polyphosphate kinase-2-related APA12_RS07390 071bfb7a242320cee59738aef4f8e52d 818 Pfam PF01011 PQQ enzyme repeat 449 473 8.6E-5 T 19-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat APA12_RS07390 071bfb7a242320cee59738aef4f8e52d 818 Pfam PF01011 PQQ enzyme repeat 233 260 1.4E-4 T 19-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat APA12_RS07390 071bfb7a242320cee59738aef4f8e52d 818 Pfam PF01011 PQQ enzyme repeat 739 776 3.6E-6 T 19-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat APA12_RS07390 071bfb7a242320cee59738aef4f8e52d 818 Gene3D G3DSA:2.140.10.10 578 814 1.2E-138 T 19-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain APA12_RS07390 071bfb7a242320cee59738aef4f8e52d 818 Gene3D G3DSA:2.140.10.10 161 542 1.2E-138 T 19-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain APA12_RS07390 071bfb7a242320cee59738aef4f8e52d 818 SMART SM00564 658 705 550.0 T 19-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APA12_RS07390 071bfb7a242320cee59738aef4f8e52d 818 SMART SM00564 344 385 5.1 T 19-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APA12_RS07390 071bfb7a242320cee59738aef4f8e52d 818 SMART SM00564 413 463 240.0 T 19-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APA12_RS07390 071bfb7a242320cee59738aef4f8e52d 818 SMART SM00564 733 766 0.26 T 19-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APA12_RS07390 071bfb7a242320cee59738aef4f8e52d 818 SMART SM00564 228 259 1.9E-4 T 19-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APA12_RS07390 071bfb7a242320cee59738aef4f8e52d 818 SUPERFAMILY SSF50998 661 809 2.09E-138 T 19-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APA12_RS07390 071bfb7a242320cee59738aef4f8e52d 818 SUPERFAMILY SSF50998 163 529 2.09E-138 T 19-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APA12_RS07390 071bfb7a242320cee59738aef4f8e52d 818 SUPERFAMILY SSF50998 567 633 2.09E-138 T 19-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APA12_RS07390 071bfb7a242320cee59738aef4f8e52d 818 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 12 810 4.9E-284 T 19-04-2016 IPR017511 PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related GO:0016021|GO:0016614|GO:0048038|GO:0055114 APA12_RS07390 071bfb7a242320cee59738aef4f8e52d 818 PANTHER PTHR32303 731 809 5.0E-163 T 19-04-2016 APA12_RS07390 071bfb7a242320cee59738aef4f8e52d 818 PANTHER PTHR32303 129 513 5.0E-163 T 19-04-2016 APA12_RS07390 071bfb7a242320cee59738aef4f8e52d 818 PANTHER PTHR32303 587 715 5.0E-163 T 19-04-2016 APA12_RS07390 071bfb7a242320cee59738aef4f8e52d 818 PANTHER PTHR32303:SF4 731 809 5.0E-163 T 19-04-2016 APA12_RS07390 071bfb7a242320cee59738aef4f8e52d 818 PANTHER PTHR32303:SF4 129 513 5.0E-163 T 19-04-2016 APA12_RS07390 071bfb7a242320cee59738aef4f8e52d 818 PANTHER PTHR32303:SF4 587 715 5.0E-163 T 19-04-2016 APA12_RS13260 ee230830f93f55e0724cc231424e5ac7 435 PANTHER PTHR11807:SF2 46 229 7.1E-47 T 19-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APA12_RS13260 ee230830f93f55e0724cc231424e5ac7 435 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 47 220 1.6E-42 T 19-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APA12_RS13260 ee230830f93f55e0724cc231424e5ac7 435 Gene3D G3DSA:3.40.50.620 46 208 5.4E-12 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS13260 ee230830f93f55e0724cc231424e5ac7 435 Pfam PF01171 PP-loop family 47 220 3.9E-42 T 19-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal APA12_RS13260 ee230830f93f55e0724cc231424e5ac7 435 SUPERFAMILY SSF52402 43 221 9.54E-44 T 19-04-2016 APA12_RS13260 ee230830f93f55e0724cc231424e5ac7 435 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 34 322 17.159 T 19-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APA12_RS13260 ee230830f93f55e0724cc231424e5ac7 435 PANTHER PTHR11807 46 229 7.1E-47 T 19-04-2016 APA12_RS00460 0ddda6f7a6bcdb624eae95e5aec1a1c2 308 Gene3D G3DSA:1.10.287.90 27 111 1.8E-32 T 19-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 APA12_RS00460 0ddda6f7a6bcdb624eae95e5aec1a1c2 308 SUPERFAMILY SSF81464 27 116 9.32E-22 T 19-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 APA12_RS00460 0ddda6f7a6bcdb624eae95e5aec1a1c2 308 Gene3D G3DSA:2.60.40.420 121 279 3.5E-42 T 19-04-2016 IPR008972 Cupredoxin APA12_RS00460 0ddda6f7a6bcdb624eae95e5aec1a1c2 308 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 15 239 2.3E-105 T 19-04-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 APA12_RS00460 0ddda6f7a6bcdb624eae95e5aec1a1c2 308 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 149 220 5.2E-7 T 19-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 APA12_RS00460 0ddda6f7a6bcdb624eae95e5aec1a1c2 308 Pfam PF06481 COX Aromatic Rich Motif 239 284 3.6E-18 T 19-04-2016 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 APA12_RS00460 0ddda6f7a6bcdb624eae95e5aec1a1c2 308 PRINTS PR01166 Cytochrome c oxidase subunit II signature 146 167 2.3E-5 T 19-04-2016 APA12_RS00460 0ddda6f7a6bcdb624eae95e5aec1a1c2 308 PRINTS PR01166 Cytochrome c oxidase subunit II signature 190 207 2.3E-5 T 19-04-2016 APA12_RS00460 0ddda6f7a6bcdb624eae95e5aec1a1c2 308 PRINTS PR01166 Cytochrome c oxidase subunit II signature 85 105 2.3E-5 T 19-04-2016 APA12_RS00460 0ddda6f7a6bcdb624eae95e5aec1a1c2 308 PRINTS PR01166 Cytochrome c oxidase subunit II signature 170 190 2.3E-5 T 19-04-2016 APA12_RS00460 0ddda6f7a6bcdb624eae95e5aec1a1c2 308 PIRSF PIRSF000292 1 308 5.8E-130 T 19-04-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 APA12_RS00460 0ddda6f7a6bcdb624eae95e5aec1a1c2 308 PANTHER PTHR22888:SF13 15 267 1.4E-128 T 19-04-2016 APA12_RS00460 0ddda6f7a6bcdb624eae95e5aec1a1c2 308 PANTHER PTHR22888 15 267 1.4E-128 T 19-04-2016 APA12_RS00460 0ddda6f7a6bcdb624eae95e5aec1a1c2 308 SUPERFAMILY SSF49503 122 280 4.32E-51 T 19-04-2016 IPR008972 Cupredoxin APA12_RS10955 ef43207e17cee9b2adee4e31edcddb7b 129 PANTHER PTHR38460:SF1 2 129 1.1E-31 T 19-04-2016 APA12_RS10955 ef43207e17cee9b2adee4e31edcddb7b 129 Gene3D G3DSA:3.30.429.10 5 125 5.9E-31 T 19-04-2016 APA12_RS10955 ef43207e17cee9b2adee4e31edcddb7b 129 Pfam PF14552 Tautomerase enzyme 38 118 1.3E-29 T 19-04-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 APA12_RS10955 ef43207e17cee9b2adee4e31edcddb7b 129 SUPERFAMILY SSF55331 2 128 2.22E-36 T 19-04-2016 IPR014347 Tautomerase/MIF superfamily APA12_RS10955 ef43207e17cee9b2adee4e31edcddb7b 129 PANTHER PTHR38460 2 129 1.1E-31 T 19-04-2016 APA12_RS11120 bd0379bdc124782a44d55590d1039bc4 327 SUPERFAMILY SSF52540 3 229 2.22E-77 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS11120 bd0379bdc124782a44d55590d1039bc4 327 Gene3D G3DSA:3.40.50.300 2 231 1.3E-82 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS11120 bd0379bdc124782a44d55590d1039bc4 327 PANTHER PTHR24220:SF455 5 226 1.3E-115 T 19-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 APA12_RS11120 bd0379bdc124782a44d55590d1039bc4 327 SMART SM00382 28 222 5.7E-16 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS11120 bd0379bdc124782a44d55590d1039bc4 327 PANTHER PTHR24220 5 226 1.3E-115 T 19-04-2016 APA12_RS11120 bd0379bdc124782a44d55590d1039bc4 327 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APA12_RS11120 bd0379bdc124782a44d55590d1039bc4 327 Pfam PF00005 ABC transporter 19 167 5.4E-35 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS08245 8fe636cc0e24791bd7acf213bb9cd3f8 547 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 362 390 - T 19-04-2016 IPR001587 Ribonuclease J, conserved site APA12_RS08245 8fe636cc0e24791bd7acf213bb9cd3f8 547 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 352 406 8.9E-12 T 19-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain APA12_RS08245 8fe636cc0e24791bd7acf213bb9cd3f8 547 SUPERFAMILY SSF56281 10 419 1.13E-87 T 19-04-2016 IPR001279 Metallo-beta-lactamase APA12_RS08245 8fe636cc0e24791bd7acf213bb9cd3f8 547 PANTHER PTHR11203 1 547 1.7E-161 T 19-04-2016 APA12_RS08245 8fe636cc0e24791bd7acf213bb9cd3f8 547 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 9 541 1.2E-120 T 19-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 APA12_RS08245 8fe636cc0e24791bd7acf213bb9cd3f8 547 Gene3D G3DSA:3.60.15.10 5 254 1.6E-71 T 19-04-2016 IPR001279 Metallo-beta-lactamase APA12_RS08245 8fe636cc0e24791bd7acf213bb9cd3f8 547 PANTHER PTHR11203:SF22 1 547 1.7E-161 T 19-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 APA12_RS08245 8fe636cc0e24791bd7acf213bb9cd3f8 547 SMART SM00849 20 221 4.9E-20 T 19-04-2016 IPR001279 Metallo-beta-lactamase APA12_RS08245 8fe636cc0e24791bd7acf213bb9cd3f8 547 Pfam PF12706 Beta-lactamase superfamily domain 31 168 3.8E-14 T 19-04-2016 IPR001279 Metallo-beta-lactamase APA12_RS01465 da2dd17af1a5d3c953d411a49fe6fca7 380 SUPERFAMILY SSF49493 189 259 2.22E-18 T 19-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 APA12_RS01465 da2dd17af1a5d3c953d411a49fe6fca7 380 SUPERFAMILY SSF49493 116 140 2.22E-18 T 19-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 APA12_RS01465 da2dd17af1a5d3c953d411a49fe6fca7 380 Gene3D G3DSA:1.10.287.110 2 108 4.0E-36 T 19-04-2016 IPR001623 DnaJ domain APA12_RS01465 da2dd17af1a5d3c953d411a49fe6fca7 380 SUPERFAMILY SSF46565 3 105 4.45E-36 T 19-04-2016 IPR001623 DnaJ domain APA12_RS01465 da2dd17af1a5d3c953d411a49fe6fca7 380 PANTHER PTHR24078:SF231 1 380 1.9E-145 T 19-04-2016 APA12_RS01465 da2dd17af1a5d3c953d411a49fe6fca7 380 Gene3D G3DSA:2.10.230.10 143 213 5.2E-21 T 19-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 APA12_RS01465 da2dd17af1a5d3c953d411a49fe6fca7 380 PRINTS PR00625 DnaJ domain signature 43 63 1.2E-30 T 19-04-2016 IPR001623 DnaJ domain APA12_RS01465 da2dd17af1a5d3c953d411a49fe6fca7 380 PRINTS PR00625 DnaJ domain signature 8 26 1.2E-30 T 19-04-2016 IPR001623 DnaJ domain APA12_RS01465 da2dd17af1a5d3c953d411a49fe6fca7 380 PRINTS PR00625 DnaJ domain signature 26 41 1.2E-30 T 19-04-2016 IPR001623 DnaJ domain APA12_RS01465 da2dd17af1a5d3c953d411a49fe6fca7 380 PRINTS PR00625 DnaJ domain signature 63 82 1.2E-30 T 19-04-2016 IPR001623 DnaJ domain APA12_RS01465 da2dd17af1a5d3c953d411a49fe6fca7 380 Gene3D G3DSA:2.60.260.20 259 338 4.6E-22 T 19-04-2016 APA12_RS01465 da2dd17af1a5d3c953d411a49fe6fca7 380 SUPERFAMILY SSF49493 262 348 6.93E-23 T 19-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 APA12_RS01465 da2dd17af1a5d3c953d411a49fe6fca7 380 Pfam PF00684 DnaJ central domain 149 210 3.1E-13 T 19-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 APA12_RS01465 da2dd17af1a5d3c953d411a49fe6fca7 380 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 6 354 1.6E-132 T 19-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 APA12_RS01465 da2dd17af1a5d3c953d411a49fe6fca7 380 SMART SM00271 5 63 2.6E-31 T 19-04-2016 IPR001623 DnaJ domain APA12_RS01465 da2dd17af1a5d3c953d411a49fe6fca7 380 PANTHER PTHR24078 1 380 1.9E-145 T 19-04-2016 APA12_RS01465 da2dd17af1a5d3c953d411a49fe6fca7 380 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 3 375 40.733 T 19-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 APA12_RS01465 da2dd17af1a5d3c953d411a49fe6fca7 380 Pfam PF01556 DnaJ C terminal domain 122 337 6.3E-41 T 19-04-2016 IPR002939 Chaperone DnaJ, C-terminal APA12_RS01465 da2dd17af1a5d3c953d411a49fe6fca7 380 ProSitePatterns PS00636 Nt-dnaJ domain signature. 48 67 - T 19-04-2016 IPR018253 DnaJ domain, conserved site APA12_RS01465 da2dd17af1a5d3c953d411a49fe6fca7 380 Pfam PF00226 DnaJ domain 6 68 5.2E-27 T 19-04-2016 IPR001623 DnaJ domain APA12_RS01465 da2dd17af1a5d3c953d411a49fe6fca7 380 Gene3D G3DSA:2.60.260.20 214 256 5.6E-22 T 19-04-2016 APA12_RS01465 da2dd17af1a5d3c953d411a49fe6fca7 380 Gene3D G3DSA:2.60.260.20 112 142 5.6E-22 T 19-04-2016 APA12_RS01465 da2dd17af1a5d3c953d411a49fe6fca7 380 SUPERFAMILY SSF57938 136 214 4.32E-19 T 19-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 APA12_RS10835 54b6f5c336b149078f3a96456e5634bb 437 SUPERFAMILY SSF51735 9 147 8.14E-31 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS10835 54b6f5c336b149078f3a96456e5634bb 437 Gene3D G3DSA:3.30.70.260 356 427 1.4E-9 T 19-04-2016 APA12_RS10835 54b6f5c336b149078f3a96456e5634bb 437 PANTHER PTHR21499 10 373 2.0E-118 T 19-04-2016 APA12_RS10835 54b6f5c336b149078f3a96456e5634bb 437 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 16 136 1.3E-16 T 19-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 APA12_RS10835 54b6f5c336b149078f3a96456e5634bb 437 SUPERFAMILY SSF55021 354 427 3.44E-12 T 19-04-2016 APA12_RS10835 54b6f5c336b149078f3a96456e5634bb 437 Pfam PF00742 Homoserine dehydrogenase 144 322 1.2E-59 T 19-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 APA12_RS10835 54b6f5c336b149078f3a96456e5634bb 437 SUPERFAMILY SSF55347 144 309 2.48E-50 T 19-04-2016 APA12_RS10835 54b6f5c336b149078f3a96456e5634bb 437 Pfam PF01842 ACT domain 356 422 1.6E-10 T 19-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 APA12_RS10835 54b6f5c336b149078f3a96456e5634bb 437 PANTHER PTHR21499:SF2 10 373 2.0E-118 T 19-04-2016 APA12_RS10835 54b6f5c336b149078f3a96456e5634bb 437 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 190 212 - T 19-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 APA12_RS10835 54b6f5c336b149078f3a96456e5634bb 437 Gene3D G3DSA:3.40.50.720 8 155 6.6E-47 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS10835 54b6f5c336b149078f3a96456e5634bb 437 PIRSF PIRSF000098 7 437 2.8E-152 T 19-04-2016 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 APA12_RS10835 54b6f5c336b149078f3a96456e5634bb 437 Gene3D G3DSA:3.30.360.10 156 305 3.9E-53 T 19-04-2016 APA12_RS07445 d132d967a301dde9cc6c599043e714af 1195 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 435 618 1.1E-25 T 19-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 APA12_RS07445 d132d967a301dde9cc6c599043e714af 1195 Gene3D G3DSA:3.40.50.920 264 424 8.8E-61 T 19-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APA12_RS07445 d132d967a301dde9cc6c599043e714af 1195 SUPERFAMILY SSF54862 674 846 8.69E-22 T 19-04-2016 APA12_RS07445 d132d967a301dde9cc6c599043e714af 1195 SUPERFAMILY SSF52518 802 1184 6.58E-118 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS07445 d132d967a301dde9cc6c599043e714af 1195 Gene3D G3DSA:3.40.50.970 805 1181 1.9E-127 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS07445 d132d967a301dde9cc6c599043e714af 1195 PANTHER PTHR32154 7 1189 0.0 T 19-04-2016 APA12_RS07445 d132d967a301dde9cc6c599043e714af 1195 SUPERFAMILY SSF53323 426 676 1.7E-73 T 19-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 APA12_RS07445 d132d967a301dde9cc6c599043e714af 1195 Pfam PF10371 Domain of unknown function 636 687 1.1E-20 T 19-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 APA12_RS07445 d132d967a301dde9cc6c599043e714af 1195 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 9 1180 0.0 T 19-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 APA12_RS07445 d132d967a301dde9cc6c599043e714af 1195 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 273 355 1.8E-12 T 19-04-2016 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II APA12_RS07445 d132d967a301dde9cc6c599043e714af 1195 Gene3D G3DSA:3.40.920.10 426 629 4.4E-73 T 19-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 APA12_RS07445 d132d967a301dde9cc6c599043e714af 1195 Gene3D G3DSA:3.30.70.20 680 791 7.6E-21 T 19-04-2016 APA12_RS07445 d132d967a301dde9cc6c599043e714af 1195 SUPERFAMILY SSF52518 9 262 1.65E-68 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS07445 d132d967a301dde9cc6c599043e714af 1195 Gene3D G3DSA:3.40.50.970 8 262 3.4E-101 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS07445 d132d967a301dde9cc6c599043e714af 1195 SUPERFAMILY SSF52922 264 424 2.83E-44 T 19-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APA12_RS07445 d132d967a301dde9cc6c599043e714af 1195 PIRSF PIRSF000159 4 1187 0.0 T 19-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 APA12_RS07445 d132d967a301dde9cc6c599043e714af 1195 Gene3D G3DSA:4.10.780.10 637 677 1.2E-13 T 19-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 APA12_RS07445 d132d967a301dde9cc6c599043e714af 1195 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 22 251 2.9E-74 T 19-04-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 APA12_RS07445 d132d967a301dde9cc6c599043e714af 1195 Pfam PF12838 4Fe-4S dicluster domain 697 766 3.1E-9 T 19-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APA12_RS07445 d132d967a301dde9cc6c599043e714af 1195 PANTHER PTHR32154:SF0 7 1189 0.0 T 19-04-2016 APA12_RS07445 d132d967a301dde9cc6c599043e714af 1195 SMART SM00890 631 688 5.9E-24 T 19-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 APA12_RS07445 d132d967a301dde9cc6c599043e714af 1195 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 969 1080 4.4E-8 T 19-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 APA12_RS07445 d132d967a301dde9cc6c599043e714af 1195 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 698 709 - T 19-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APA12_RS07445 d132d967a301dde9cc6c599043e714af 1195 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 754 765 - T 19-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APA12_RS00920 bcfae0df22fbd9f5d82f6a992b227aa9 151 Pfam PF03692 Putative zinc- or iron-chelating domain 23 91 2.1E-7 T 19-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein APA12_RS00920 bcfae0df22fbd9f5d82f6a992b227aa9 151 PIRSF PIRSF006173 1 144 2.6E-62 T 19-04-2016 IPR008228 Uncharacterised conserved protein UCP006173 APA12_RS00920 bcfae0df22fbd9f5d82f6a992b227aa9 151 PANTHER PTHR37421 1 147 4.1E-58 T 19-04-2016 APA12_RS00920 bcfae0df22fbd9f5d82f6a992b227aa9 151 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 1 144 37.615 T 19-04-2016 IPR008228 Uncharacterised conserved protein UCP006173 APA12_RS00920 bcfae0df22fbd9f5d82f6a992b227aa9 151 PANTHER PTHR37421:SF1 1 147 4.1E-58 T 19-04-2016 APA12_RS05670 66db4fcf6d7d257998d5fdab8aea76aa 163 PIRSF PIRSF032131 1 163 4.6E-41 T 19-04-2016 IPR009562 Protein of unknown function DUF1178 APA12_RS05670 66db4fcf6d7d257998d5fdab8aea76aa 163 Pfam PF06676 Protein of unknown function (DUF1178) 1 159 5.3E-50 T 19-04-2016 IPR009562 Protein of unknown function DUF1178 APA12_RS03125 010f6304eff06dae96fbce3c83879615 404 Gene3D G3DSA:2.120.10.30 238 402 8.6E-58 T 19-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APA12_RS03125 010f6304eff06dae96fbce3c83879615 404 Gene3D G3DSA:2.120.10.30 85 202 8.6E-58 T 19-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APA12_RS03125 010f6304eff06dae96fbce3c83879615 404 PANTHER PTHR10907 248 401 8.9E-87 T 19-04-2016 APA12_RS03125 010f6304eff06dae96fbce3c83879615 404 PANTHER PTHR10907 1 226 8.9E-87 T 19-04-2016 APA12_RS03125 010f6304eff06dae96fbce3c83879615 404 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 96 386 7.2E-41 T 19-04-2016 IPR013658 SMP-30/Gluconolactonase/LRE-like region APA12_RS03125 010f6304eff06dae96fbce3c83879615 404 SUPERFAMILY SSF63829 237 401 5.23E-56 T 19-04-2016 APA12_RS03125 010f6304eff06dae96fbce3c83879615 404 SUPERFAMILY SSF63829 59 201 5.23E-56 T 19-04-2016 APA12_RS03125 010f6304eff06dae96fbce3c83879615 404 PANTHER PTHR10907:SF47 248 401 8.9E-87 T 19-04-2016 APA12_RS03125 010f6304eff06dae96fbce3c83879615 404 PANTHER PTHR10907:SF47 1 226 8.9E-87 T 19-04-2016 APA12_RS03865 8ad65493cdbaa5ed0f816478d54f4e26 413 SUPERFAMILY SSF52777 183 412 1.02E-85 T 19-04-2016 APA12_RS03865 8ad65493cdbaa5ed0f816478d54f4e26 413 PANTHER PTHR23151 3 413 1.1E-212 T 19-04-2016 APA12_RS03865 8ad65493cdbaa5ed0f816478d54f4e26 413 SUPERFAMILY SSF51230 1 95 1.81E-25 T 19-04-2016 IPR011053 Single hybrid motif APA12_RS03865 8ad65493cdbaa5ed0f816478d54f4e26 413 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 183 410 3.5E-76 T 19-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 APA12_RS03865 8ad65493cdbaa5ed0f816478d54f4e26 413 Pfam PF00364 Biotin-requiring enzyme 4 76 3.4E-19 T 19-04-2016 IPR000089 Biotin/lipoyl attachment APA12_RS03865 8ad65493cdbaa5ed0f816478d54f4e26 413 Pfam PF02817 e3 binding domain 126 159 2.2E-11 T 19-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APA12_RS03865 8ad65493cdbaa5ed0f816478d54f4e26 413 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 413 1.3E-164 T 19-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 APA12_RS03865 8ad65493cdbaa5ed0f816478d54f4e26 413 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 19-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site APA12_RS03865 8ad65493cdbaa5ed0f816478d54f4e26 413 Gene3D G3DSA:4.10.320.10 126 170 6.0E-15 T 19-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APA12_RS03865 8ad65493cdbaa5ed0f816478d54f4e26 413 Gene3D G3DSA:3.30.559.10 174 410 4.8E-88 T 19-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain APA12_RS03865 8ad65493cdbaa5ed0f816478d54f4e26 413 Gene3D G3DSA:2.40.50.100 1 95 1.2E-26 T 19-04-2016 APA12_RS03865 8ad65493cdbaa5ed0f816478d54f4e26 413 SUPERFAMILY SSF47005 125 163 1.31E-9 T 19-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APA12_RS03865 8ad65493cdbaa5ed0f816478d54f4e26 413 PANTHER PTHR23151:SF47 3 413 1.1E-212 T 19-04-2016 APA12_RS01610 60a38c1dfb2246b0509863ed5942c758 340 Gene3D G3DSA:3.40.190.10 29 171 4.2E-51 T 19-04-2016 APA12_RS01610 60a38c1dfb2246b0509863ed5942c758 340 SUPERFAMILY SSF53850 30 338 5.43E-90 T 19-04-2016 APA12_RS01610 60a38c1dfb2246b0509863ed5942c758 340 PANTHER PTHR30570 23 340 3.6E-112 T 19-04-2016 APA12_RS01610 60a38c1dfb2246b0509863ed5942c758 340 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 30 338 6.9E-112 T 19-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 APA12_RS01610 60a38c1dfb2246b0509863ed5942c758 340 Gene3D G3DSA:3.40.190.10 183 337 1.2E-22 T 19-04-2016 APA12_RS01610 60a38c1dfb2246b0509863ed5942c758 340 Pfam PF12849 PBP superfamily domain 28 305 3.5E-54 T 19-04-2016 IPR024370 PBP domain APA12_RS01610 60a38c1dfb2246b0509863ed5942c758 340 PIRSF PIRSF002756 2 340 7.8E-111 T 19-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 APA12_RS01610 60a38c1dfb2246b0509863ed5942c758 340 PANTHER PTHR30570:SF0 23 340 3.6E-112 T 19-04-2016 APA12_RS09460 4cbe0c6a23988879822fa803d97da24b 1302 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 631 666 1.1E-4 T 19-04-2016 IPR030930 Adhesin of bacterial autotransporter system APA12_RS09460 4cbe0c6a23988879822fa803d97da24b 1302 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 757 792 2.0E-7 T 19-04-2016 IPR030930 Adhesin of bacterial autotransporter system APA12_RS09460 4cbe0c6a23988879822fa803d97da24b 1302 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 738 774 6.9E-7 T 19-04-2016 IPR030930 Adhesin of bacterial autotransporter system APA12_RS09460 4cbe0c6a23988879822fa803d97da24b 1302 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 562 598 1.5E-7 T 19-04-2016 IPR030930 Adhesin of bacterial autotransporter system APA12_RS09460 4cbe0c6a23988879822fa803d97da24b 1302 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 776 812 6.7E-6 T 19-04-2016 IPR030930 Adhesin of bacterial autotransporter system APA12_RS09460 4cbe0c6a23988879822fa803d97da24b 1302 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 545 579 7.8E-8 T 19-04-2016 IPR030930 Adhesin of bacterial autotransporter system APA12_RS09460 4cbe0c6a23988879822fa803d97da24b 1302 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 366 399 8.2E-8 T 19-04-2016 IPR030930 Adhesin of bacterial autotransporter system APA12_RS09460 4cbe0c6a23988879822fa803d97da24b 1302 Pfam PF13403 Hint domain 954 1093 1.2E-42 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS09460 4cbe0c6a23988879822fa803d97da24b 1302 SUPERFAMILY SSF51294 955 1090 4.45E-10 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS09460 4cbe0c6a23988879822fa803d97da24b 1302 Gene3D G3DSA:2.170.16.10 954 1095 8.2E-6 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS09780 01f97a847691ca5a2f3db9549910b103 172 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 9 165 3.2E-44 T 19-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APA12_RS09780 01f97a847691ca5a2f3db9549910b103 172 Pfam PF13710 ACT domain 18 80 3.7E-9 T 19-04-2016 APA12_RS09780 01f97a847691ca5a2f3db9549910b103 172 Pfam PF10369 Small subunit of acetolactate synthase 92 165 4.8E-24 T 19-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APA12_RS09780 01f97a847691ca5a2f3db9549910b103 172 SUPERFAMILY SSF55021 87 169 6.98E-24 T 19-04-2016 APA12_RS09780 01f97a847691ca5a2f3db9549910b103 172 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 11 83 3.0E-21 T 19-04-2016 APA12_RS09780 01f97a847691ca5a2f3db9549910b103 172 SUPERFAMILY SSF55021 10 83 5.15E-14 T 19-04-2016 APA12_RS09780 01f97a847691ca5a2f3db9549910b103 172 Gene3D G3DSA:3.30.70.1150 92 170 1.1E-26 T 19-04-2016 APA12_RS09780 01f97a847691ca5a2f3db9549910b103 172 PANTHER PTHR30239 10 165 1.0E-54 T 19-04-2016 APA12_RS09780 01f97a847691ca5a2f3db9549910b103 172 Gene3D G3DSA:3.30.70.260 10 85 1.3E-25 T 19-04-2016 APA12_RS03545 a14a3302bdcc2778ae3d1bda5635e261 456 Pfam PF00324 Amino acid permease 20 439 4.7E-83 T 19-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 APA12_RS03545 a14a3302bdcc2778ae3d1bda5635e261 456 PANTHER PTHR11785 13 454 8.4E-135 T 19-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APA12_RS03545 a14a3302bdcc2778ae3d1bda5635e261 456 PIRSF PIRSF006060 4 455 5.2E-52 T 19-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APA12_RS03545 a14a3302bdcc2778ae3d1bda5635e261 456 ProSitePatterns PS00218 Amino acid permeases signature. 45 75 - T 19-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 APA12_RS03545 a14a3302bdcc2778ae3d1bda5635e261 456 PANTHER PTHR11785:SF24 13 454 8.4E-135 T 19-04-2016 APA12_RS10945 08dca289ed5d1c683a2b415b79787fef 812 Pfam PF13360 PQQ-like domain 227 517 1.7E-10 T 19-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat APA12_RS10945 08dca289ed5d1c683a2b415b79787fef 812 Pfam PF13360 PQQ-like domain 683 774 3.1E-6 T 19-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat APA12_RS10945 08dca289ed5d1c683a2b415b79787fef 812 SMART SM00564 728 761 0.0015 T 19-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APA12_RS10945 08dca289ed5d1c683a2b415b79787fef 812 SMART SM00564 667 700 200.0 T 19-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APA12_RS10945 08dca289ed5d1c683a2b415b79787fef 812 SMART SM00564 490 523 670.0 T 19-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APA12_RS10945 08dca289ed5d1c683a2b415b79787fef 812 SMART SM00564 226 258 4.4 T 19-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APA12_RS10945 08dca289ed5d1c683a2b415b79787fef 812 SMART SM00564 350 390 78.0 T 19-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APA12_RS10945 08dca289ed5d1c683a2b415b79787fef 812 SMART SM00564 419 468 48.0 T 19-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APA12_RS10945 08dca289ed5d1c683a2b415b79787fef 812 PANTHER PTHR32303:SF4 141 518 3.0E-133 T 19-04-2016 APA12_RS10945 08dca289ed5d1c683a2b415b79787fef 812 PANTHER PTHR32303:SF4 589 807 3.0E-133 T 19-04-2016 APA12_RS10945 08dca289ed5d1c683a2b415b79787fef 812 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 21 806 3.0E-272 T 19-04-2016 IPR017511 PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related GO:0016021|GO:0016614|GO:0048038|GO:0055114 APA12_RS10945 08dca289ed5d1c683a2b415b79787fef 812 PANTHER PTHR32303 141 518 3.0E-133 T 19-04-2016 APA12_RS10945 08dca289ed5d1c683a2b415b79787fef 812 PANTHER PTHR32303 589 807 3.0E-133 T 19-04-2016 APA12_RS10945 08dca289ed5d1c683a2b415b79787fef 812 SUPERFAMILY SSF50998 570 793 2.88E-129 T 19-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APA12_RS10945 08dca289ed5d1c683a2b415b79787fef 812 SUPERFAMILY SSF50998 174 532 2.88E-129 T 19-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APA12_RS10945 08dca289ed5d1c683a2b415b79787fef 812 Gene3D G3DSA:2.140.10.10 174 545 1.7E-136 T 19-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain APA12_RS10945 08dca289ed5d1c683a2b415b79787fef 812 Gene3D G3DSA:2.140.10.10 581 809 1.7E-136 T 19-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain APA12_RS07630 fbbfa875118b3a5d929203fd8207bb26 339 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 17 54 8.2E-9 T 19-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APA12_RS07630 fbbfa875118b3a5d929203fd8207bb26 339 Gene3D G3DSA:1.10.3720.10 111 330 2.9E-23 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS07630 fbbfa875118b3a5d929203fd8207bb26 339 PANTHER PTHR30465 10 335 1.3E-73 T 19-04-2016 APA12_RS07630 fbbfa875118b3a5d929203fd8207bb26 339 PANTHER PTHR30465:SF2 10 335 1.3E-73 T 19-04-2016 APA12_RS07630 fbbfa875118b3a5d929203fd8207bb26 339 SUPERFAMILY SSF161098 115 316 3.53E-22 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS07630 fbbfa875118b3a5d929203fd8207bb26 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 140 330 1.7E-20 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS15325 fc584a583dc662389c5fb06d11c6a50e 111 Gene3D G3DSA:2.40.170.20 1 110 3.9E-15 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS15325 fc584a583dc662389c5fb06d11c6a50e 111 Pfam PF00593 TonB dependent receptor 1 103 6.7E-7 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS15325 fc584a583dc662389c5fb06d11c6a50e 111 SUPERFAMILY SSF56935 1 110 9.16E-11 T 19-04-2016 APA12_RS12615 51ff7d367628f18bf7354f81bba66a7e 510 PRINTS PR00834 HtrA/DegQ protease family signature 246 263 7.6E-53 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APA12_RS12615 51ff7d367628f18bf7354f81bba66a7e 510 PRINTS PR00834 HtrA/DegQ protease family signature 332 344 7.6E-53 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APA12_RS12615 51ff7d367628f18bf7354f81bba66a7e 510 PRINTS PR00834 HtrA/DegQ protease family signature 190 214 7.6E-53 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APA12_RS12615 51ff7d367628f18bf7354f81bba66a7e 510 PRINTS PR00834 HtrA/DegQ protease family signature 128 140 7.6E-53 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APA12_RS12615 51ff7d367628f18bf7354f81bba66a7e 510 PRINTS PR00834 HtrA/DegQ protease family signature 149 169 7.6E-53 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APA12_RS12615 51ff7d367628f18bf7354f81bba66a7e 510 PRINTS PR00834 HtrA/DegQ protease family signature 224 241 7.6E-53 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APA12_RS12615 51ff7d367628f18bf7354f81bba66a7e 510 SUPERFAMILY SSF50156 412 499 7.62E-13 T 19-04-2016 IPR001478 PDZ domain GO:0005515 APA12_RS12615 51ff7d367628f18bf7354f81bba66a7e 510 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 48 491 4.0E-151 T 19-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 APA12_RS12615 51ff7d367628f18bf7354f81bba66a7e 510 Pfam PF13180 PDZ domain 431 485 3.2E-9 T 19-04-2016 IPR001478 PDZ domain GO:0005515 APA12_RS12615 51ff7d367628f18bf7354f81bba66a7e 510 Pfam PF13180 PDZ domain 292 381 1.5E-11 T 19-04-2016 IPR001478 PDZ domain GO:0005515 APA12_RS12615 51ff7d367628f18bf7354f81bba66a7e 510 Gene3D G3DSA:2.40.10.10 46 181 1.3E-36 T 19-04-2016 APA12_RS12615 51ff7d367628f18bf7354f81bba66a7e 510 PANTHER PTHR22939:SF79 26 69 3.7E-118 T 19-04-2016 APA12_RS12615 51ff7d367628f18bf7354f81bba66a7e 510 PANTHER PTHR22939:SF79 101 395 3.7E-118 T 19-04-2016 APA12_RS12615 51ff7d367628f18bf7354f81bba66a7e 510 Pfam PF13365 Trypsin-like peptidase domain 119 253 9.0E-35 T 19-04-2016 APA12_RS12615 51ff7d367628f18bf7354f81bba66a7e 510 PANTHER PTHR22939 26 69 3.7E-118 T 19-04-2016 APA12_RS12615 51ff7d367628f18bf7354f81bba66a7e 510 PANTHER PTHR22939 101 395 3.7E-118 T 19-04-2016 APA12_RS12615 51ff7d367628f18bf7354f81bba66a7e 510 SUPERFAMILY SSF50494 108 289 2.06E-68 T 19-04-2016 IPR009003 Peptidase S1, PA clan APA12_RS12615 51ff7d367628f18bf7354f81bba66a7e 510 SUPERFAMILY SSF50494 46 70 2.06E-68 T 19-04-2016 IPR009003 Peptidase S1, PA clan APA12_RS12615 51ff7d367628f18bf7354f81bba66a7e 510 Gene3D G3DSA:2.40.10.10 182 293 2.2E-48 T 19-04-2016 APA12_RS12615 51ff7d367628f18bf7354f81bba66a7e 510 Gene3D G3DSA:2.30.42.10 294 388 9.2E-25 T 19-04-2016 IPR001478 PDZ domain GO:0005515 APA12_RS12615 51ff7d367628f18bf7354f81bba66a7e 510 Gene3D G3DSA:2.30.42.10 411 488 3.6E-15 T 19-04-2016 IPR001478 PDZ domain GO:0005515 APA12_RS12615 51ff7d367628f18bf7354f81bba66a7e 510 SMART SM00228 292 373 2.0E-10 T 19-04-2016 IPR001478 PDZ domain GO:0005515 APA12_RS12615 51ff7d367628f18bf7354f81bba66a7e 510 SMART SM00228 409 494 3.8E-7 T 19-04-2016 IPR001478 PDZ domain GO:0005515 APA12_RS12615 51ff7d367628f18bf7354f81bba66a7e 510 SUPERFAMILY SSF50156 250 374 8.68E-24 T 19-04-2016 IPR001478 PDZ domain GO:0005515 APA12_RS12860 73ca62d8c4e9383115151fddb66087e1 95 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 5 95 1.3E-21 T 19-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 APA12_RS12860 73ca62d8c4e9383115151fddb66087e1 95 SUPERFAMILY SSF141000 3 93 1.57E-25 T 19-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 APA12_RS12860 73ca62d8c4e9383115151fddb66087e1 95 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 21.263 T 19-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 APA12_RS12860 73ca62d8c4e9383115151fddb66087e1 95 PANTHER PTHR15004 1 95 3.9E-22 T 19-04-2016 APA12_RS12860 73ca62d8c4e9383115151fddb66087e1 95 PANTHER PTHR15004:SF0 1 95 3.9E-22 T 19-04-2016 APA12_RS12860 73ca62d8c4e9383115151fddb66087e1 95 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 19 90 1.1E-17 T 19-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 APA12_RS00550 63c1c950cbdecf515952b0d3587f1649 316 Pfam PF00106 short chain dehydrogenase 19 221 1.6E-25 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS00550 63c1c950cbdecf515952b0d3587f1649 316 PANTHER PTHR24320 8 313 5.8E-97 T 19-04-2016 APA12_RS00550 63c1c950cbdecf515952b0d3587f1649 316 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 157 1.6E-5 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS00550 63c1c950cbdecf515952b0d3587f1649 316 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 96 107 1.6E-5 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS00550 63c1c950cbdecf515952b0d3587f1649 316 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 181 200 1.6E-5 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS00550 63c1c950cbdecf515952b0d3587f1649 316 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 200 5.0E-15 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS00550 63c1c950cbdecf515952b0d3587f1649 316 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 20 37 5.0E-15 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS00550 63c1c950cbdecf515952b0d3587f1649 316 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 96 107 5.0E-15 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS00550 63c1c950cbdecf515952b0d3587f1649 316 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 221 5.0E-15 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS00550 63c1c950cbdecf515952b0d3587f1649 316 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 159 5.0E-15 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS00550 63c1c950cbdecf515952b0d3587f1649 316 Gene3D G3DSA:3.40.50.720 8 265 1.8E-52 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS00550 63c1c950cbdecf515952b0d3587f1649 316 PANTHER PTHR24320:SF45 8 313 5.8E-97 T 19-04-2016 APA12_RS00550 63c1c950cbdecf515952b0d3587f1649 316 SUPERFAMILY SSF51735 12 249 1.2E-46 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS00405 d6d77438edcbc7058d83d0cfae633c5a 420 PANTHER PTHR23502:SF19 21 412 6.5E-100 T 19-04-2016 APA12_RS00405 d6d77438edcbc7058d83d0cfae633c5a 420 Gene3D G3DSA:1.20.1250.20 224 415 1.6E-6 T 19-04-2016 APA12_RS00405 d6d77438edcbc7058d83d0cfae633c5a 420 Gene3D G3DSA:1.20.1250.20 22 202 6.0E-30 T 19-04-2016 APA12_RS00405 d6d77438edcbc7058d83d0cfae633c5a 420 SUPERFAMILY SSF103473 16 410 1.15E-57 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS00405 d6d77438edcbc7058d83d0cfae633c5a 420 ProSitePatterns PS00216 Sugar transport proteins signature 1. 77 93 - T 19-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APA12_RS00405 d6d77438edcbc7058d83d0cfae633c5a 420 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 25 409 5.0E-89 T 19-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 APA12_RS00405 d6d77438edcbc7058d83d0cfae633c5a 420 Pfam PF07690 Major Facilitator Superfamily 29 380 8.7E-40 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APA12_RS00405 d6d77438edcbc7058d83d0cfae633c5a 420 PANTHER PTHR23502 21 412 6.5E-100 T 19-04-2016 APA12_RS03955 4fc07de5f2526cb80008c24c42d8764f 167 Pfam PF04138 GtrA-like protein 20 138 2.0E-19 T 19-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 APA12_RS08755 040866ae16de61b4ce772eabffd9f7a4 472 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 206 370 3.4E-25 T 19-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APA12_RS08755 040866ae16de61b4ce772eabffd9f7a4 472 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 133 7.3E-18 T 19-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APA12_RS08755 040866ae16de61b4ce772eabffd9f7a4 472 PIRSF PIRSF006485 11 471 3.3E-161 T 19-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 APA12_RS08755 040866ae16de61b4ce772eabffd9f7a4 472 SUPERFAMILY SSF52540 14 188 2.25E-42 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS08755 040866ae16de61b4ce772eabffd9f7a4 472 Pfam PF01926 50S ribosome-binding GTPase 15 130 8.7E-27 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 APA12_RS08755 040866ae16de61b4ce772eabffd9f7a4 472 Pfam PF01926 50S ribosome-binding GTPase 207 325 4.0E-23 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 APA12_RS08755 040866ae16de61b4ce772eabffd9f7a4 472 PANTHER PTHR11649 11 459 5.2E-164 T 19-04-2016 APA12_RS08755 040866ae16de61b4ce772eabffd9f7a4 472 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 13 463 6.4E-163 T 19-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 APA12_RS08755 040866ae16de61b4ce772eabffd9f7a4 472 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 383 463 4.3E-33 T 19-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like APA12_RS08755 040866ae16de61b4ce772eabffd9f7a4 472 PANTHER PTHR11649:SF68 11 459 5.2E-164 T 19-04-2016 APA12_RS08755 040866ae16de61b4ce772eabffd9f7a4 472 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 208 228 2.9E-6 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 APA12_RS08755 040866ae16de61b4ce772eabffd9f7a4 472 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 257 272 2.9E-6 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 APA12_RS08755 040866ae16de61b4ce772eabffd9f7a4 472 Hamap MF_00195 GTPase Der [der]. 12 466 36.729 T 19-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 APA12_RS08755 040866ae16de61b4ce772eabffd9f7a4 472 Gene3D G3DSA:3.30.300.20 390 464 7.4E-32 T 19-04-2016 IPR015946 K homology domain-like, alpha/beta APA12_RS08755 040866ae16de61b4ce772eabffd9f7a4 472 Gene3D G3DSA:3.40.50.300 12 185 3.3E-41 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS08755 040866ae16de61b4ce772eabffd9f7a4 472 Gene3D G3DSA:3.40.50.300 206 389 1.8E-48 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS08755 040866ae16de61b4ce772eabffd9f7a4 472 SUPERFAMILY SSF52540 148 470 1.44E-61 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS08755 040866ae16de61b4ce772eabffd9f7a4 472 SMART SM00382 204 344 0.074 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS08755 040866ae16de61b4ce772eabffd9f7a4 472 SMART SM00382 11 152 9.6 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS10590 2c5762e4b36f3ac0f734a96195682662 706 Gene3D G3DSA:2.60.40.10 12 163 1.2E-50 T 19-04-2016 IPR013783 Immunoglobulin-like fold APA12_RS10590 2c5762e4b36f3ac0f734a96195682662 706 SUPERFAMILY SSF81296 12 148 1.76E-42 T 19-04-2016 IPR014756 Immunoglobulin E-set APA12_RS10590 2c5762e4b36f3ac0f734a96195682662 706 PANTHER PTHR10357 603 703 5.0E-286 T 19-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APA12_RS10590 2c5762e4b36f3ac0f734a96195682662 706 PANTHER PTHR10357 8 585 5.0E-286 T 19-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APA12_RS10590 2c5762e4b36f3ac0f734a96195682662 706 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 16 104 5.7E-17 T 19-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 APA12_RS10590 2c5762e4b36f3ac0f734a96195682662 706 Gene3D G3DSA:2.60.40.1180 595 702 9.6E-23 T 19-04-2016 IPR013780 Glycosyl hydrolase, all-beta APA12_RS10590 2c5762e4b36f3ac0f734a96195682662 706 SUPERFAMILY SSF51445 506 582 8.45E-131 T 19-04-2016 IPR017853 Glycoside hydrolase superfamily APA12_RS10590 2c5762e4b36f3ac0f734a96195682662 706 SUPERFAMILY SSF51445 151 477 8.45E-131 T 19-04-2016 IPR017853 Glycoside hydrolase superfamily APA12_RS10590 2c5762e4b36f3ac0f734a96195682662 706 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 12 702 1.0E-300 T 19-04-2016 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 UniPathway: UPA00165 APA12_RS10590 2c5762e4b36f3ac0f734a96195682662 706 Gene3D G3DSA:3.20.20.80 164 582 1.6E-116 T 19-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APA12_RS10590 2c5762e4b36f3ac0f734a96195682662 706 SMART SM00642 167 574 9.2E-9 T 19-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APA12_RS10590 2c5762e4b36f3ac0f734a96195682662 706 PANTHER PTHR10357:SF74 603 703 5.0E-286 T 19-04-2016 APA12_RS10590 2c5762e4b36f3ac0f734a96195682662 706 PANTHER PTHR10357:SF74 8 585 5.0E-286 T 19-04-2016 APA12_RS10590 2c5762e4b36f3ac0f734a96195682662 706 SUPERFAMILY SSF51011 595 702 4.82E-19 T 19-04-2016 APA12_RS10590 2c5762e4b36f3ac0f734a96195682662 706 Pfam PF00128 Alpha amylase, catalytic domain 196 358 5.8E-12 T 19-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APA12_RS08285 c6534b593cae5305da846c0cafb3f4b3 342 PANTHER PTHR11432 12 337 2.2E-177 T 19-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 APA12_RS08285 c6534b593cae5305da846c0cafb3f4b3 342 Pfam PF00146 NADH dehydrogenase 20 325 5.9E-130 T 19-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 APA12_RS08285 c6534b593cae5305da846c0cafb3f4b3 342 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 12 332 25.424 T 19-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 APA12_RS08285 c6534b593cae5305da846c0cafb3f4b3 342 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 213 226 - T 19-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 APA12_RS08285 c6534b593cae5305da846c0cafb3f4b3 342 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 58 73 - T 19-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 APA12_RS08285 c6534b593cae5305da846c0cafb3f4b3 342 PANTHER PTHR11432:SF3 12 337 2.2E-177 T 19-04-2016 APA12_RS00270 824433327f6e8020dad0ae0e9269d6ce 198 PANTHER PTHR30446 1 197 2.6E-80 T 19-04-2016 APA12_RS00270 824433327f6e8020dad0ae0e9269d6ce 198 SUPERFAMILY SSF111304 4 197 1.83E-62 T 19-04-2016 IPR023627 Recombination protein RecR APA12_RS00270 824433327f6e8020dad0ae0e9269d6ce 198 Hamap MF_00017 Recombination protein RecR [recR]. 1 198 86.991 T 19-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 APA12_RS00270 824433327f6e8020dad0ae0e9269d6ce 198 SMART SM00493 79 164 0.0012 T 19-04-2016 IPR006171 Toprim domain APA12_RS00270 824433327f6e8020dad0ae0e9269d6ce 198 TIGRFAM TIGR00615 recR: recombination protein RecR 4 196 3.6E-58 T 19-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 APA12_RS00270 824433327f6e8020dad0ae0e9269d6ce 198 Pfam PF13662 Toprim domain 80 171 1.6E-20 T 19-04-2016 IPR006171 Toprim domain APA12_RS00270 824433327f6e8020dad0ae0e9269d6ce 198 ProSitePatterns PS01300 RecR protein signature. 56 77 - T 19-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 APA12_RS00270 824433327f6e8020dad0ae0e9269d6ce 198 PANTHER PTHR30446:SF0 1 197 2.6E-80 T 19-04-2016 APA12_RS00270 824433327f6e8020dad0ae0e9269d6ce 198 Pfam PF02132 RecR protein 40 77 5.9E-13 T 19-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger APA12_RS11840 0f3a7c463583b69036eee2a5430d9ae5 446 SUPERFAMILY SSF53822 43 418 1.2E-88 T 19-04-2016 IPR028082 Periplasmic binding protein-like I APA12_RS11840 0f3a7c463583b69036eee2a5430d9ae5 446 PANTHER PTHR30483 18 427 2.4E-200 T 19-04-2016 APA12_RS11840 0f3a7c463583b69036eee2a5430d9ae5 446 Pfam PF13433 Periplasmic binding protein domain 44 414 5.5E-170 T 19-04-2016 APA12_RS11840 0f3a7c463583b69036eee2a5430d9ae5 446 PANTHER PTHR30483:SF8 18 427 2.4E-200 T 19-04-2016 APA12_RS11840 0f3a7c463583b69036eee2a5430d9ae5 446 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 44 411 3.4E-170 T 19-04-2016 IPR017777 ABC transporter, urea, substrate-binding, UrtA APA12_RS11840 0f3a7c463583b69036eee2a5430d9ae5 446 Gene3D G3DSA:3.40.50.2300 159 352 1.4E-72 T 19-04-2016 APA12_RS05495 667705bf41ec2c0f69921917fdb04227 156 Pfam PF02391 MoaE protein 14 117 9.6E-27 T 19-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 APA12_RS05495 667705bf41ec2c0f69921917fdb04227 156 PANTHER PTHR23404 25 152 8.0E-24 T 19-04-2016 APA12_RS05495 667705bf41ec2c0f69921917fdb04227 156 Gene3D G3DSA:3.90.1170.40 3 148 7.3E-43 T 19-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 APA12_RS05495 667705bf41ec2c0f69921917fdb04227 156 PANTHER PTHR23404:SF2 25 152 8.0E-24 T 19-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 APA12_RS05495 667705bf41ec2c0f69921917fdb04227 156 SUPERFAMILY SSF54690 7 148 2.35E-40 T 19-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 APA12_RS06305 40be3e8a627a83cb29936be66e086d08 295 Gene3D G3DSA:3.40.50.720 41 285 2.4E-43 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS06305 40be3e8a627a83cb29936be66e086d08 295 PANTHER PTHR24322:SF57 45 174 1.3E-23 T 19-04-2016 APA12_RS06305 40be3e8a627a83cb29936be66e086d08 295 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 41 226 0.0072 T 19-04-2016 APA12_RS06305 40be3e8a627a83cb29936be66e086d08 295 Pfam PF00106 short chain dehydrogenase 42 231 1.5E-33 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS06305 40be3e8a627a83cb29936be66e086d08 295 PANTHER PTHR24322:SF57 190 222 1.3E-23 T 19-04-2016 APA12_RS06305 40be3e8a627a83cb29936be66e086d08 295 SUPERFAMILY SSF51735 40 287 2.49E-48 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS06305 40be3e8a627a83cb29936be66e086d08 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 115 126 2.8E-16 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS06305 40be3e8a627a83cb29936be66e086d08 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 180 2.8E-16 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS06305 40be3e8a627a83cb29936be66e086d08 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 228 2.8E-16 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS06305 40be3e8a627a83cb29936be66e086d08 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 190 209 2.8E-16 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS06305 40be3e8a627a83cb29936be66e086d08 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 42 59 2.8E-16 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS06305 40be3e8a627a83cb29936be66e086d08 295 PANTHER PTHR24322 45 174 1.3E-23 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS06305 40be3e8a627a83cb29936be66e086d08 295 PANTHER PTHR24322 190 222 1.3E-23 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS02790 04cd78376f421bffbc41b5bd38215cb1 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 8.8E-19 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS02790 04cd78376f421bffbc41b5bd38215cb1 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 8.8E-19 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS02790 04cd78376f421bffbc41b5bd38215cb1 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 8.8E-19 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS02790 04cd78376f421bffbc41b5bd38215cb1 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 8.8E-19 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS02790 04cd78376f421bffbc41b5bd38215cb1 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 8.8E-19 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS02790 04cd78376f421bffbc41b5bd38215cb1 258 Gene3D G3DSA:3.40.50.720 9 231 1.4E-62 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS02790 04cd78376f421bffbc41b5bd38215cb1 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 19-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APA12_RS02790 04cd78376f421bffbc41b5bd38215cb1 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.6E-7 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS02790 04cd78376f421bffbc41b5bd38215cb1 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 2.6E-7 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS02790 04cd78376f421bffbc41b5bd38215cb1 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.6E-7 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS02790 04cd78376f421bffbc41b5bd38215cb1 258 Pfam PF00106 short chain dehydrogenase 9 189 1.5E-51 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS02790 04cd78376f421bffbc41b5bd38215cb1 258 PANTHER PTHR24322 13 139 2.0E-63 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS02790 04cd78376f421bffbc41b5bd38215cb1 258 PANTHER PTHR24322 155 187 2.0E-63 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS02790 04cd78376f421bffbc41b5bd38215cb1 258 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 191 0.0038 T 19-04-2016 APA12_RS02790 04cd78376f421bffbc41b5bd38215cb1 258 PANTHER PTHR24322:SF392 13 139 2.0E-63 T 19-04-2016 APA12_RS02790 04cd78376f421bffbc41b5bd38215cb1 258 PANTHER PTHR24322:SF392 155 187 2.0E-63 T 19-04-2016 APA12_RS02790 04cd78376f421bffbc41b5bd38215cb1 258 SUPERFAMILY SSF51735 3 235 6.01E-62 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS09920 c196fcceaf65586e85e05723246568e9 401 PANTHER PTHR11751:SF306 15 398 9.2E-152 T 19-04-2016 APA12_RS09920 c196fcceaf65586e85e05723246568e9 401 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 237 250 - T 19-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 APA12_RS09920 c196fcceaf65586e85e05723246568e9 401 SUPERFAMILY SSF53383 5 399 4.89E-118 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APA12_RS09920 c196fcceaf65586e85e05723246568e9 401 Gene3D G3DSA:3.40.640.10 46 277 4.2E-79 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APA12_RS09920 c196fcceaf65586e85e05723246568e9 401 PANTHER PTHR11751 15 398 9.2E-152 T 19-04-2016 APA12_RS09920 c196fcceaf65586e85e05723246568e9 401 Gene3D G3DSA:3.90.1150.10 278 400 1.3E-41 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APA12_RS09920 c196fcceaf65586e85e05723246568e9 401 Pfam PF00155 Aminotransferase class I and II 33 393 4.2E-80 T 19-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APA12_RS03805 b788350f72373ce7452b248cf61b8bf4 190 PANTHER PTHR33627:SF1 5 190 7.4E-29 T 19-04-2016 APA12_RS03805 b788350f72373ce7452b248cf61b8bf4 190 Pfam PF13546 DDE superfamily endonuclease 73 190 5.3E-33 T 19-04-2016 APA12_RS03805 b788350f72373ce7452b248cf61b8bf4 190 PANTHER PTHR33627 5 190 7.4E-29 T 19-04-2016 APA12_RS00645 773de2920aa6ed7b5bb612cf71ea5e73 493 PIRSF PIRSF006060 2 472 3.7E-56 T 19-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APA12_RS00645 773de2920aa6ed7b5bb612cf71ea5e73 493 PANTHER PTHR11785:SF25 17 458 1.0E-228 T 19-04-2016 APA12_RS00645 773de2920aa6ed7b5bb612cf71ea5e73 493 PANTHER PTHR11785 17 458 1.0E-228 T 19-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APA12_RS00645 773de2920aa6ed7b5bb612cf71ea5e73 493 Pfam PF00324 Amino acid permease 28 460 2.6E-108 T 19-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 APA12_RS00705 ee781fc7d18f229a821b2b4273639e2e 450 PIRSF PIRSF006060 1 447 1.3E-67 T 19-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APA12_RS00705 ee781fc7d18f229a821b2b4273639e2e 450 TIGRFAM TIGR00908 2A0305: ethanolamine permease 7 442 1.2E-178 T 19-04-2016 IPR004757 Ethanolamine permease APA12_RS00705 ee781fc7d18f229a821b2b4273639e2e 450 Pfam PF13520 Amino acid permease 12 419 9.8E-37 T 19-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APA12_RS00705 ee781fc7d18f229a821b2b4273639e2e 450 PANTHER PTHR11785 8 449 2.3E-132 T 19-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APA12_RS00705 ee781fc7d18f229a821b2b4273639e2e 450 PANTHER PTHR11785:SF337 8 449 2.3E-132 T 19-04-2016 APA12_RS06240 186f8df2483215b44d1c667e88e0e02e 409 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 7 400 1.2E-120 T 19-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 APA12_RS06240 186f8df2483215b44d1c667e88e0e02e 409 Gene3D G3DSA:3.40.50.10300 189 406 1.6E-80 T 19-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 APA12_RS06240 186f8df2483215b44d1c667e88e0e02e 409 PANTHER PTHR14359 4 409 5.0E-166 T 19-04-2016 APA12_RS06240 186f8df2483215b44d1c667e88e0e02e 409 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 192 378 8.4E-66 T 19-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 APA12_RS06240 186f8df2483215b44d1c667e88e0e02e 409 PANTHER PTHR14359:SF20 4 409 5.0E-166 T 19-04-2016 APA12_RS06240 186f8df2483215b44d1c667e88e0e02e 409 SUPERFAMILY SSF52507 7 182 1.18E-59 T 19-04-2016 IPR003382 Flavoprotein GO:0003824 APA12_RS06240 186f8df2483215b44d1c667e88e0e02e 409 Pfam PF02441 Flavoprotein 9 136 1.7E-32 T 19-04-2016 IPR003382 Flavoprotein GO:0003824 APA12_RS06240 186f8df2483215b44d1c667e88e0e02e 409 Gene3D G3DSA:3.40.50.1950 8 187 3.9E-64 T 19-04-2016 IPR003382 Flavoprotein GO:0003824 APA12_RS06240 186f8df2483215b44d1c667e88e0e02e 409 SUPERFAMILY SSF102645 190 407 3.92E-70 T 19-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 APA12_RS09995 7af91bc0dda4a656e5c565908596b54c 643 PANTHER PTHR11451 1 633 0.0 T 19-04-2016 APA12_RS09995 7af91bc0dda4a656e5c565908596b54c 643 Gene3D G3DSA:3.40.50.800 533 633 1.9E-29 T 19-04-2016 IPR004154 Anticodon-binding APA12_RS09995 7af91bc0dda4a656e5c565908596b54c 643 SMART SM00863 169 219 2.5E-23 T 19-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 APA12_RS09995 7af91bc0dda4a656e5c565908596b54c 643 Gene3D G3DSA:3.30.980.10 66 129 3.1E-38 T 19-04-2016 APA12_RS09995 7af91bc0dda4a656e5c565908596b54c 643 Gene3D G3DSA:3.30.980.10 187 223 3.1E-38 T 19-04-2016 APA12_RS09995 7af91bc0dda4a656e5c565908596b54c 643 Pfam PF03129 Anticodon binding domain 543 632 1.3E-18 T 19-04-2016 IPR004154 Anticodon-binding APA12_RS09995 7af91bc0dda4a656e5c565908596b54c 643 Gene3D G3DSA:3.30.54.20 132 186 4.2E-25 T 19-04-2016 APA12_RS09995 7af91bc0dda4a656e5c565908596b54c 643 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 633 3.9E-211 T 19-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APA12_RS09995 7af91bc0dda4a656e5c565908596b54c 643 Pfam PF02824 TGS domain 4 61 7.2E-5 T 19-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 APA12_RS09995 7af91bc0dda4a656e5c565908596b54c 643 SUPERFAMILY SSF55681 243 528 1.31E-100 T 19-04-2016 APA12_RS09995 7af91bc0dda4a656e5c565908596b54c 643 PANTHER PTHR11451:SF31 1 633 0.0 T 19-04-2016 APA12_RS09995 7af91bc0dda4a656e5c565908596b54c 643 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 636 33.392 T 19-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APA12_RS09995 7af91bc0dda4a656e5c565908596b54c 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 364 387 1.0E-53 T 19-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APA12_RS09995 7af91bc0dda4a656e5c565908596b54c 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 536 548 1.0E-53 T 19-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APA12_RS09995 7af91bc0dda4a656e5c565908596b54c 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 509 522 1.0E-53 T 19-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APA12_RS09995 7af91bc0dda4a656e5c565908596b54c 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 466 494 1.0E-53 T 19-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APA12_RS09995 7af91bc0dda4a656e5c565908596b54c 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 331 359 1.0E-53 T 19-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APA12_RS09995 7af91bc0dda4a656e5c565908596b54c 643 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 169 219 9.1E-12 T 19-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 APA12_RS09995 7af91bc0dda4a656e5c565908596b54c 643 SUPERFAMILY SSF55186 63 241 2.62E-61 T 19-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 APA12_RS09995 7af91bc0dda4a656e5c565908596b54c 643 SUPERFAMILY SSF52954 532 633 7.1E-29 T 19-04-2016 IPR004154 Anticodon-binding APA12_RS09995 7af91bc0dda4a656e5c565908596b54c 643 SUPERFAMILY SSF81271 3 61 1.11E-12 T 19-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 APA12_RS09995 7af91bc0dda4a656e5c565908596b54c 643 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 321 531 7.3E-43 T 19-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS09995 7af91bc0dda4a656e5c565908596b54c 643 Gene3D G3DSA:3.30.930.10 242 532 7.9E-117 T 19-04-2016 APA12_RS09995 7af91bc0dda4a656e5c565908596b54c 643 Gene3D G3DSA:3.10.20.30 1 64 1.6E-18 T 19-04-2016 IPR012675 Beta-grasp domain APA12_RS04980 428b3d1f935671c7f99c8f188742995b 157 Gene3D G3DSA:3.10.50.30 76 156 1.8E-31 T 19-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 APA12_RS04980 428b3d1f935671c7f99c8f188742995b 157 SUPERFAMILY SSF46557 3 78 6.15E-27 T 19-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 APA12_RS04980 428b3d1f935671c7f99c8f188742995b 157 Gene3D G3DSA:1.10.287.180 2 75 1.6E-32 T 19-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 APA12_RS04980 428b3d1f935671c7f99c8f188742995b 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 19-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 APA12_RS04980 428b3d1f935671c7f99c8f188742995b 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 33.258 T 19-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 APA12_RS04980 428b3d1f935671c7f99c8f188742995b 157 SUPERFAMILY SSF54534 82 155 1.57E-23 T 19-04-2016 APA12_RS04980 428b3d1f935671c7f99c8f188742995b 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 19-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 APA12_RS04980 428b3d1f935671c7f99c8f188742995b 157 PANTHER PTHR30437 2 156 1.6E-62 T 19-04-2016 APA12_RS04980 428b3d1f935671c7f99c8f188742995b 157 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 5.2E-30 T 19-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 APA12_RS04980 428b3d1f935671c7f99c8f188742995b 157 PIRSF PIRSF006092 1 157 1.6E-52 T 19-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 APA12_RS04980 428b3d1f935671c7f99c8f188742995b 157 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 3.5E-60 T 19-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 APA12_RS04980 428b3d1f935671c7f99c8f188742995b 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 155 1.0E-29 T 19-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 APA12_RS09610 58e7c1ef6c2de37de4101aa4502c8fdb 672 Pfam PF00905 Penicillin binding protein transpeptidase domain 254 579 1.3E-47 T 19-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 APA12_RS09610 58e7c1ef6c2de37de4101aa4502c8fdb 672 PANTHER PTHR30627 470 632 2.8E-111 T 19-04-2016 APA12_RS09610 58e7c1ef6c2de37de4101aa4502c8fdb 672 PANTHER PTHR30627 92 449 2.8E-111 T 19-04-2016 APA12_RS09610 58e7c1ef6c2de37de4101aa4502c8fdb 672 Gene3D G3DSA:3.40.710.10 228 598 8.7E-75 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APA12_RS09610 58e7c1ef6c2de37de4101aa4502c8fdb 672 SUPERFAMILY SSF56519 92 220 1.31E-33 T 19-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 APA12_RS09610 58e7c1ef6c2de37de4101aa4502c8fdb 672 PANTHER PTHR30627:SF1 470 632 2.8E-111 T 19-04-2016 APA12_RS09610 58e7c1ef6c2de37de4101aa4502c8fdb 672 PANTHER PTHR30627:SF1 92 449 2.8E-111 T 19-04-2016 APA12_RS09610 58e7c1ef6c2de37de4101aa4502c8fdb 672 Pfam PF03717 Penicillin-binding Protein dimerisation domain 93 217 2.4E-14 T 19-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 APA12_RS09610 58e7c1ef6c2de37de4101aa4502c8fdb 672 SUPERFAMILY SSF56601 228 449 4.05E-77 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APA12_RS09610 58e7c1ef6c2de37de4101aa4502c8fdb 672 SUPERFAMILY SSF56601 491 603 4.05E-77 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APA12_RS09610 58e7c1ef6c2de37de4101aa4502c8fdb 672 Gene3D G3DSA:3.90.1310.10 160 218 2.3E-12 T 19-04-2016 APA12_RS00870 847d109f6f33c1eddb8fcd3247ce53aa 353 Pfam PF13672 Protein phosphatase 2C 41 229 3.5E-7 T 19-04-2016 APA12_RS00870 847d109f6f33c1eddb8fcd3247ce53aa 353 SUPERFAMILY SSF81606 30 262 1.18E-35 T 19-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 APA12_RS00870 847d109f6f33c1eddb8fcd3247ce53aa 353 PANTHER PTHR13832 32 263 5.5E-19 T 19-04-2016 IPR015655 Protein phosphatase 2C family GO:0004722|GO:0006470 KEGG: 04660+3.1.3.16 APA12_RS00870 847d109f6f33c1eddb8fcd3247ce53aa 353 Gene3D G3DSA:3.60.40.10 29 262 9.9E-36 T 19-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 APA12_RS00870 847d109f6f33c1eddb8fcd3247ce53aa 353 SMART SM00332 20 261 5.1E-5 T 19-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 APA12_RS00870 847d109f6f33c1eddb8fcd3247ce53aa 353 PANTHER PTHR13832:SF278 32 263 5.5E-19 T 19-04-2016 APA12_RS00870 847d109f6f33c1eddb8fcd3247ce53aa 353 SMART SM00331 35 263 4.5E-5 T 19-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 APA12_RS13210 58e8526a3ee3dc34e18bd055aa657d9b 445 SUPERFAMILY SSF53244 302 437 6.41E-21 T 19-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APA12_RS13210 58e8526a3ee3dc34e18bd055aa657d9b 445 PIRSF PIRSF001563 13 440 2.6E-104 T 19-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 APA12_RS13210 58e8526a3ee3dc34e18bd055aa657d9b 445 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 149 164 - T 19-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 APA12_RS13210 58e8526a3ee3dc34e18bd055aa657d9b 445 Pfam PF08245 Mur ligase middle domain 59 280 5.6E-9 T 19-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APA12_RS13210 58e8526a3ee3dc34e18bd055aa657d9b 445 TIGRFAM TIGR01499 folC: bifunctional protein FolC 36 437 1.7E-107 T 19-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 APA12_RS13210 58e8526a3ee3dc34e18bd055aa657d9b 445 Gene3D G3DSA:3.40.1190.10 19 303 6.9E-94 T 19-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APA12_RS13210 58e8526a3ee3dc34e18bd055aa657d9b 445 Gene3D G3DSA:3.90.190.20 305 438 1.9E-22 T 19-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APA12_RS13210 58e8526a3ee3dc34e18bd055aa657d9b 445 PANTHER PTHR11136 21 438 4.3E-112 T 19-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 APA12_RS13210 58e8526a3ee3dc34e18bd055aa657d9b 445 SUPERFAMILY SSF53623 20 299 5.04E-84 T 19-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APA12_RS09595 4c98370279753dad0e988a5a7213bc43 161 PANTHER PTHR34701 4 158 5.6E-21 T 19-04-2016 APA12_RS09595 4c98370279753dad0e988a5a7213bc43 161 Pfam PF02381 MraZ protein, putative antitoxin-like 4 75 1.0E-6 T 19-04-2016 IPR020603 MraZ domain APA12_RS09595 4c98370279753dad0e988a5a7213bc43 161 Pfam PF02381 MraZ protein, putative antitoxin-like 83 138 3.0E-7 T 19-04-2016 IPR020603 MraZ domain APA12_RS09595 4c98370279753dad0e988a5a7213bc43 161 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 161 32.429 T 19-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 APA12_RS09595 4c98370279753dad0e988a5a7213bc43 161 SUPERFAMILY SSF89447 3 143 3.56E-33 T 19-04-2016 APA12_RS09595 4c98370279753dad0e988a5a7213bc43 161 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 4 127 2.0E-9 T 19-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 APA12_RS08610 85cba6314c8ecffccdf3d9406b0ece48 326 PANTHER PTHR34069:SF2 6 326 1.5E-125 T 19-04-2016 APA12_RS08610 85cba6314c8ecffccdf3d9406b0ece48 326 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 237 325 1.3E-37 T 19-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 APA12_RS08610 85cba6314c8ecffccdf3d9406b0ece48 326 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 11 325 1.9E-129 T 19-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 APA12_RS08610 85cba6314c8ecffccdf3d9406b0ece48 326 SUPERFAMILY SSF53901 12 325 4.93E-71 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APA12_RS08610 85cba6314c8ecffccdf3d9406b0ece48 326 PANTHER PTHR34069 6 326 1.5E-125 T 19-04-2016 APA12_RS08610 85cba6314c8ecffccdf3d9406b0ece48 326 Gene3D G3DSA:3.40.47.10 168 325 6.5E-56 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APA12_RS08610 85cba6314c8ecffccdf3d9406b0ece48 326 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 113 193 3.7E-35 T 19-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 APA12_RS08610 85cba6314c8ecffccdf3d9406b0ece48 326 Gene3D G3DSA:3.40.47.10 5 167 2.2E-65 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APA12_RS08610 85cba6314c8ecffccdf3d9406b0ece48 326 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 8 326 70.102 T 19-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 APA12_RS12775 49e6f9438f01950e8c6a86afc20ab0ef 150 Pfam PF01220 Dehydroquinase class II 6 141 2.3E-58 T 19-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APA12_RS12775 49e6f9438f01950e8c6a86afc20ab0ef 150 PANTHER PTHR21272 1 150 8.2E-86 T 19-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APA12_RS12775 49e6f9438f01950e8c6a86afc20ab0ef 150 Gene3D G3DSA:3.40.50.9100 6 146 5.2E-66 T 19-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APA12_RS12775 49e6f9438f01950e8c6a86afc20ab0ef 150 PIRSF PIRSF001399 3 148 1.7E-64 T 19-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APA12_RS12775 49e6f9438f01950e8c6a86afc20ab0ef 150 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 143 3.8E-60 T 19-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APA12_RS12775 49e6f9438f01950e8c6a86afc20ab0ef 150 SUPERFAMILY SSF52304 6 146 7.33E-62 T 19-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APA12_RS12775 49e6f9438f01950e8c6a86afc20ab0ef 150 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 150 68.77 T 19-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APA12_RS12775 49e6f9438f01950e8c6a86afc20ab0ef 150 ProSitePatterns PS01029 Dehydroquinase class II signature. 9 26 - T 19-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APA12_RS12775 49e6f9438f01950e8c6a86afc20ab0ef 150 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 6 141 3.0E-54 T 19-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APA12_RS11150 7cefa624758872474c6ec7ada4d93e46 163 SUPERFAMILY SSF46785 24 162 3.7E-28 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS11150 7cefa624758872474c6ec7ada4d93e46 163 Pfam PF01047 MarR family 58 112 2.5E-8 T 19-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APA12_RS11150 7cefa624758872474c6ec7ada4d93e46 163 SMART SM00347 48 148 3.4E-13 T 19-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APA12_RS11150 7cefa624758872474c6ec7ada4d93e46 163 Gene3D G3DSA:1.10.10.10 18 162 5.6E-30 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS11150 7cefa624758872474c6ec7ada4d93e46 163 PANTHER PTHR33164 1 162 2.0E-21 T 19-04-2016 APA12_RS05025 a6f3590b4b87102a681515227ff72518 201 Pfam PF03948 Ribosomal protein L9, C-terminal domain 66 148 7.8E-23 T 19-04-2016 IPR020069 Ribosomal protein L9, C-terminal APA12_RS05025 a6f3590b4b87102a681515227ff72518 201 Pfam PF01281 Ribosomal protein L9, N-terminal domain 5 50 2.0E-20 T 19-04-2016 IPR020070 Ribosomal protein L9, N-terminal APA12_RS05025 a6f3590b4b87102a681515227ff72518 201 SUPERFAMILY SSF55658 5 60 2.09E-17 T 19-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal APA12_RS05025 a6f3590b4b87102a681515227ff72518 201 TIGRFAM TIGR00158 L9: ribosomal protein bL9 5 148 1.5E-39 T 19-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS05025 a6f3590b4b87102a681515227ff72518 201 Gene3D G3DSA:3.40.5.10 5 55 2.3E-23 T 19-04-2016 IPR020070 Ribosomal protein L9, N-terminal APA12_RS05025 a6f3590b4b87102a681515227ff72518 201 Gene3D G3DSA:3.10.430.100 64 149 3.9E-25 T 19-04-2016 IPR020069 Ribosomal protein L9, C-terminal APA12_RS05025 a6f3590b4b87102a681515227ff72518 201 PANTHER PTHR21368 5 166 2.3E-51 T 19-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS05025 a6f3590b4b87102a681515227ff72518 201 ProSitePatterns PS00651 Ribosomal protein L9 signature. 16 43 - T 19-04-2016 IPR020070 Ribosomal protein L9, N-terminal APA12_RS05025 a6f3590b4b87102a681515227ff72518 201 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 4 150 24.668 T 19-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS05025 a6f3590b4b87102a681515227ff72518 201 SUPERFAMILY SSF55653 60 150 2.88E-25 T 19-04-2016 IPR020069 Ribosomal protein L9, C-terminal APA12_RS00630 dab3c53cbe551a52b24c4b93b61c7e05 332 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 278 291 - T 19-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APA12_RS00630 dab3c53cbe551a52b24c4b93b61c7e05 332 PANTHER PTHR10584 7 330 1.9E-93 T 19-04-2016 APA12_RS00630 dab3c53cbe551a52b24c4b93b61c7e05 332 Gene3D G3DSA:3.40.1190.20 7 322 7.1E-72 T 19-04-2016 IPR029056 Ribokinase-like APA12_RS00630 dab3c53cbe551a52b24c4b93b61c7e05 332 PANTHER PTHR10584:SF153 7 330 1.9E-93 T 19-04-2016 APA12_RS00630 dab3c53cbe551a52b24c4b93b61c7e05 332 Pfam PF00294 pfkB family carbohydrate kinase 62 322 5.3E-47 T 19-04-2016 IPR011611 Carbohydrate kinase PfkB APA12_RS00630 dab3c53cbe551a52b24c4b93b61c7e05 332 SUPERFAMILY SSF53613 7 322 1.33E-76 T 19-04-2016 IPR029056 Ribokinase-like APA12_RS06225 9386d4414bf4f977e2a2e123528c4fae 89 SUPERFAMILY SSF46992 3 86 3.4E-31 T 19-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS06225 9386d4414bf4f977e2a2e123528c4fae 89 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 18.229 T 19-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS06225 9386d4414bf4f977e2a2e123528c4fae 89 Gene3D G3DSA:1.20.58.110 1 86 5.6E-33 T 19-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS06225 9386d4414bf4f977e2a2e123528c4fae 89 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 3.9E-28 T 19-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS06225 9386d4414bf4f977e2a2e123528c4fae 89 Pfam PF01649 Ribosomal protein S20 2 84 3.4E-29 T 19-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS06225 9386d4414bf4f977e2a2e123528c4fae 89 PANTHER PTHR33398 1 87 5.9E-33 T 19-04-2016 APA12_RS06225 9386d4414bf4f977e2a2e123528c4fae 89 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 22 89 7.0E-21 T 19-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS09575 9036fd20d6816ae9f833ce5241549e6e 90 Pfam PF10073 Uncharacterized protein conserved in bacteria (DUF2312) 18 89 3.5E-33 T 19-04-2016 IPR018753 Azospirillum phage Cd, Gp10 APA12_RS09575 9036fd20d6816ae9f833ce5241549e6e 90 Hamap MF_00797 UPF0335 protein . 13 90 20.824 T 19-04-2016 IPR018753 Azospirillum phage Cd, Gp10 APA12_RS11450 b540a2766cbc4268e7d5fd24ab0dbbcf 734 PANTHER PTHR30509:SF1 344 683 4.9E-64 T 19-04-2016 APA12_RS11450 b540a2766cbc4268e7d5fd24ab0dbbcf 734 PANTHER PTHR30509 25 275 4.9E-64 T 19-04-2016 APA12_RS11450 b540a2766cbc4268e7d5fd24ab0dbbcf 734 PANTHER PTHR30509 344 683 4.9E-64 T 19-04-2016 APA12_RS11450 b540a2766cbc4268e7d5fd24ab0dbbcf 734 Pfam PF04632 Fusaric acid resistance protein family 23 700 8.1E-145 T 19-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 APA12_RS11450 b540a2766cbc4268e7d5fd24ab0dbbcf 734 PANTHER PTHR30509:SF1 25 275 4.9E-64 T 19-04-2016 APA12_RS03655 1cdb0f28a4baa2a462bfab55d2ba5222 855 Pfam PF08482 ATP-dependent helicase C-terminal 713 843 3.2E-42 T 19-04-2016 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal APA12_RS03655 1cdb0f28a4baa2a462bfab55d2ba5222 855 SMART SM00847 410 541 1.3E-13 T 19-04-2016 IPR007502 Helicase-associated domain GO:0004386 APA12_RS03655 1cdb0f28a4baa2a462bfab55d2ba5222 855 Pfam PF04408 Helicase associated domain (HA2) 411 519 6.1E-17 T 19-04-2016 IPR007502 Helicase-associated domain GO:0004386 APA12_RS03655 1cdb0f28a4baa2a462bfab55d2ba5222 855 SMART SM00490 248 347 1.2E-18 T 19-04-2016 IPR001650 Helicase, C-terminal APA12_RS03655 1cdb0f28a4baa2a462bfab55d2ba5222 855 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 139 148 - T 19-04-2016 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site GO:0003676|GO:0005524|GO:0008026 APA12_RS03655 1cdb0f28a4baa2a462bfab55d2ba5222 855 PANTHER PTHR18934 15 450 2.6E-136 T 19-04-2016 APA12_RS03655 1cdb0f28a4baa2a462bfab55d2ba5222 855 Gene3D G3DSA:3.40.50.300 17 181 1.4E-42 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS03655 1cdb0f28a4baa2a462bfab55d2ba5222 855 Pfam PF00271 Helicase conserved C-terminal domain 231 345 7.4E-13 T 19-04-2016 IPR001650 Helicase, C-terminal APA12_RS03655 1cdb0f28a4baa2a462bfab55d2ba5222 855 SUPERFAMILY SSF52540 41 358 3.54E-49 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS03655 1cdb0f28a4baa2a462bfab55d2ba5222 855 PIRSF PIRSF005496 12 855 3.4E-261 T 19-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type APA12_RS03655 1cdb0f28a4baa2a462bfab55d2ba5222 855 Gene3D G3DSA:3.40.50.300 231 363 8.4E-16 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS03655 1cdb0f28a4baa2a462bfab55d2ba5222 855 SMART SM00487 15 206 1.5E-16 T 19-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APA12_RS03655 1cdb0f28a4baa2a462bfab55d2ba5222 855 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 17 854 2.3E-246 T 19-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type APA12_RS04500 f6ec900a586764773bd56b048c5faea0 723 Pfam PF04632 Fusaric acid resistance protein family 39 711 5.5E-159 T 19-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 APA12_RS04500 f6ec900a586764773bd56b048c5faea0 723 PANTHER PTHR30509 28 274 3.6E-79 T 19-04-2016 APA12_RS04500 f6ec900a586764773bd56b048c5faea0 723 PANTHER PTHR30509 353 690 3.6E-79 T 19-04-2016 APA12_RS04500 f6ec900a586764773bd56b048c5faea0 723 PANTHER PTHR30509:SF1 28 274 3.6E-79 T 19-04-2016 APA12_RS04500 f6ec900a586764773bd56b048c5faea0 723 PANTHER PTHR30509:SF1 353 690 3.6E-79 T 19-04-2016 APA12_RS00140 164115c0bb01a4172a0dbce06905b75a 383 PANTHER PTHR10160 2 378 4.0E-135 T 19-04-2016 APA12_RS00140 164115c0bb01a4172a0dbce06905b75a 383 PANTHER PTHR10160:SF19 2 378 4.0E-135 T 19-04-2016 APA12_RS00140 164115c0bb01a4172a0dbce06905b75a 383 SUPERFAMILY SSF51735 141 318 1.03E-32 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS00140 164115c0bb01a4172a0dbce06905b75a 383 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 7 141 1.8E-37 T 19-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal APA12_RS00140 164115c0bb01a4172a0dbce06905b75a 383 SMART SM01002 150 312 3.3E-61 T 19-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain APA12_RS00140 164115c0bb01a4172a0dbce06905b75a 383 Gene3D G3DSA:3.40.50.1770 4 191 1.2E-51 T 19-04-2016 APA12_RS00140 164115c0bb01a4172a0dbce06905b75a 383 SMART SM01003 6 141 4.7E-48 T 19-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal APA12_RS00140 164115c0bb01a4172a0dbce06905b75a 383 Gene3D G3DSA:3.40.50.1770 192 366 5.1E-34 T 19-04-2016 APA12_RS00140 164115c0bb01a4172a0dbce06905b75a 383 SUPERFAMILY SSF52283 4 172 6.97E-39 T 19-04-2016 APA12_RS00140 164115c0bb01a4172a0dbce06905b75a 383 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 145 367 1.5E-59 T 19-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain APA12_RS12845 d24b39038a93e633c64a8bbb9bcd72ac 428 Gene3D G3DSA:3.90.1150.10 2 59 1.3E-32 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APA12_RS12845 d24b39038a93e633c64a8bbb9bcd72ac 428 Gene3D G3DSA:3.90.1150.10 318 423 1.3E-32 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APA12_RS12845 d24b39038a93e633c64a8bbb9bcd72ac 428 PANTHER PTHR11986 1 428 1.0E-174 T 19-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APA12_RS12845 d24b39038a93e633c64a8bbb9bcd72ac 428 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 272 - T 19-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APA12_RS12845 d24b39038a93e633c64a8bbb9bcd72ac 428 Gene3D G3DSA:3.40.640.10 60 317 1.6E-81 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APA12_RS12845 d24b39038a93e633c64a8bbb9bcd72ac 428 SUPERFAMILY SSF53383 20 422 7.26E-122 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APA12_RS12845 d24b39038a93e633c64a8bbb9bcd72ac 428 PANTHER PTHR11986:SF70 1 428 1.0E-174 T 19-04-2016 APA12_RS12845 d24b39038a93e633c64a8bbb9bcd72ac 428 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 10 422 2.2E-166 T 19-04-2016 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 APA12_RS12845 d24b39038a93e633c64a8bbb9bcd72ac 428 Pfam PF00202 Aminotransferase class-III 23 422 1.6E-117 T 19-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APA12_RS01270 fbb50ecf9582b9c06781aac85e70f022 357 SUPERFAMILY SSF51395 10 356 1.16E-101 T 19-04-2016 APA12_RS01270 fbb50ecf9582b9c06781aac85e70f022 357 Gene3D G3DSA:3.20.20.70 3 356 3.3E-128 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS01270 fbb50ecf9582b9c06781aac85e70f022 357 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 12 356 9.5E-107 T 19-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APA12_RS01270 fbb50ecf9582b9c06781aac85e70f022 357 Pfam PF01180 Dihydroorotate dehydrogenase 45 341 1.7E-82 T 19-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 APA12_RS01270 fbb50ecf9582b9c06781aac85e70f022 357 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 19-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 APA12_RS01270 fbb50ecf9582b9c06781aac85e70f022 357 PANTHER PTHR11938 162 357 1.2E-90 T 19-04-2016 APA12_RS01270 fbb50ecf9582b9c06781aac85e70f022 357 PANTHER PTHR11938 10 141 1.2E-90 T 19-04-2016 APA12_RS03555 cc4a187c12e69ea4661f3c4626bde035 1211 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 70 181 2.2E-41 T 19-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 APA12_RS03555 cc4a187c12e69ea4661f3c4626bde035 1211 Pfam PF01619 Proline dehydrogenase 191 488 1.8E-95 T 19-04-2016 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|UniPathway: UPA00261 APA12_RS03555 cc4a187c12e69ea4661f3c4626bde035 1211 SUPERFAMILY SSF81935 15 183 2.22E-56 T 19-04-2016 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 APA12_RS03555 cc4a187c12e69ea4661f3c4626bde035 1211 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 823 834 - T 19-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 APA12_RS03555 cc4a187c12e69ea4661f3c4626bde035 1211 SUPERFAMILY SSF53720 570 1019 1.96E-120 T 19-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APA12_RS03555 cc4a187c12e69ea4661f3c4626bde035 1211 Gene3D G3DSA:3.20.20.220 184 531 9.1E-109 T 19-04-2016 IPR029041 FAD-linked oxidoreductase-like APA12_RS03555 cc4a187c12e69ea4661f3c4626bde035 1211 Gene3D G3DSA:1.20.5.550 14 64 2.2E-14 T 19-04-2016 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 APA12_RS03555 cc4a187c12e69ea4661f3c4626bde035 1211 SUPERFAMILY SSF51730 184 532 3.53E-115 T 19-04-2016 IPR029041 FAD-linked oxidoreductase-like APA12_RS03555 cc4a187c12e69ea4661f3c4626bde035 1211 PANTHER PTHR11699:SF18 542 1020 1.1E-155 T 19-04-2016 APA12_RS03555 cc4a187c12e69ea4661f3c4626bde035 1211 Gene3D G3DSA:3.40.309.10 811 998 2.1E-43 T 19-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APA12_RS03555 cc4a187c12e69ea4661f3c4626bde035 1211 Pfam PF00171 Aldehyde dehydrogenase family 575 1013 4.2E-114 T 19-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APA12_RS03555 cc4a187c12e69ea4661f3c4626bde035 1211 Gene3D G3DSA:1.10.2060.10 65 182 1.9E-46 T 19-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 APA12_RS03555 cc4a187c12e69ea4661f3c4626bde035 1211 Gene3D G3DSA:3.40.605.10 571 810 5.0E-67 T 19-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APA12_RS03555 cc4a187c12e69ea4661f3c4626bde035 1211 PANTHER PTHR11699 542 1020 1.1E-155 T 19-04-2016 APA12_RS03555 cc4a187c12e69ea4661f3c4626bde035 1211 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 525 1019 3.9E-207 T 19-04-2016 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 APA12_RS03555 cc4a187c12e69ea4661f3c4626bde035 1211 PIRSF PIRSF000197 2 1211 0.0 T 19-04-2016 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 APA12_RS07995 880d409d815a1b8115e6f22a64cff27b 180 Gene3D G3DSA:2.160.10.10 4 176 2.0E-56 T 19-04-2016 APA12_RS07995 880d409d815a1b8115e6f22a64cff27b 180 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 19-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APA12_RS07995 880d409d815a1b8115e6f22a64cff27b 180 SMART SM01266 8 54 6.1E-11 T 19-04-2016 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 APA12_RS07995 880d409d815a1b8115e6f22a64cff27b 180 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 125 159 4.5E-11 T 19-04-2016 IPR001451 Hexapeptide repeat APA12_RS07995 880d409d815a1b8115e6f22a64cff27b 180 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 73 104 0.19 T 19-04-2016 IPR001451 Hexapeptide repeat APA12_RS07995 880d409d815a1b8115e6f22a64cff27b 180 Pfam PF12464 Maltose acetyltransferase 10 42 1.7E-8 T 19-04-2016 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 APA12_RS07995 880d409d815a1b8115e6f22a64cff27b 180 PANTHER PTHR23416 1 176 2.9E-75 T 19-04-2016 APA12_RS07995 880d409d815a1b8115e6f22a64cff27b 180 SUPERFAMILY SSF51161 7 176 1.01E-50 T 19-04-2016 IPR011004 Trimeric LpxA-like APA12_RS07995 880d409d815a1b8115e6f22a64cff27b 180 PANTHER PTHR23416:SF58 1 176 2.9E-75 T 19-04-2016 APA12_RS12595 da019827eb9323e3c16225992f47b3a6 622 Pfam PF00920 Dehydratase family 34 609 3.2E-213 T 19-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APA12_RS12595 da019827eb9323e3c16225992f47b3a6 622 PANTHER PTHR21000:SF11 409 616 0.0 T 19-04-2016 APA12_RS12595 da019827eb9323e3c16225992f47b3a6 622 PANTHER PTHR21000:SF11 1 371 0.0 T 19-04-2016 APA12_RS12595 da019827eb9323e3c16225992f47b3a6 622 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 612 44.679 T 19-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APA12_RS12595 da019827eb9323e3c16225992f47b3a6 622 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 19-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APA12_RS12595 da019827eb9323e3c16225992f47b3a6 622 SUPERFAMILY SSF52016 424 615 3.22E-59 T 19-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APA12_RS12595 da019827eb9323e3c16225992f47b3a6 622 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 512 523 - T 19-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APA12_RS12595 da019827eb9323e3c16225992f47b3a6 622 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 612 1.3E-241 T 19-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APA12_RS12595 da019827eb9323e3c16225992f47b3a6 622 SUPERFAMILY SSF143975 3 368 7.32E-131 T 19-04-2016 APA12_RS12595 da019827eb9323e3c16225992f47b3a6 622 SUPERFAMILY SSF143975 395 423 7.32E-131 T 19-04-2016 APA12_RS12595 da019827eb9323e3c16225992f47b3a6 622 PANTHER PTHR21000 409 616 0.0 T 19-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APA12_RS12595 da019827eb9323e3c16225992f47b3a6 622 PANTHER PTHR21000 1 371 0.0 T 19-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APA12_RS05040 3e85b09b836387c282dde1fdfe10971a 454 Pfam PF09312 SurA N-terminal domain 53 161 2.4E-9 T 19-04-2016 IPR015391 SurA N-terminal APA12_RS05040 3e85b09b836387c282dde1fdfe10971a 454 SUPERFAMILY SSF109998 54 213 3.3E-25 T 19-04-2016 IPR027304 Trigger factor/SurA domain APA12_RS05040 3e85b09b836387c282dde1fdfe10971a 454 PANTHER PTHR10657 51 297 2.4E-22 T 19-04-2016 APA12_RS05040 3e85b09b836387c282dde1fdfe10971a 454 SUPERFAMILY SSF54534 196 297 1.24E-18 T 19-04-2016 APA12_RS05040 3e85b09b836387c282dde1fdfe10971a 454 Gene3D G3DSA:3.10.50.40 307 427 1.4E-7 T 19-04-2016 APA12_RS05040 3e85b09b836387c282dde1fdfe10971a 454 Gene3D G3DSA:3.10.50.40 193 297 3.4E-20 T 19-04-2016 APA12_RS05040 3e85b09b836387c282dde1fdfe10971a 454 Pfam PF00639 PPIC-type PPIASE domain 203 294 8.6E-11 T 19-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 APA12_RS05040 3e85b09b836387c282dde1fdfe10971a 454 PANTHER PTHR10657:SF11 51 297 2.4E-22 T 19-04-2016 APA12_RS08725 64b168467602e2f6eccfd09928fe7b1b 453 PANTHER PTHR13779 37 453 3.7E-182 T 19-04-2016 APA12_RS08725 64b168467602e2f6eccfd09928fe7b1b 453 SUPERFAMILY SSF52540 35 244 9.81E-42 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS08725 64b168467602e2f6eccfd09928fe7b1b 453 Gene3D G3DSA:3.40.50.300 36 176 8.6E-30 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS08725 64b168467602e2f6eccfd09928fe7b1b 453 PANTHER PTHR13779:SF7 37 453 3.7E-182 T 19-04-2016 APA12_RS08725 64b168467602e2f6eccfd09928fe7b1b 453 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 76 184 2.4E-14 T 19-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APA12_RS08725 64b168467602e2f6eccfd09928fe7b1b 453 Gene3D G3DSA:1.10.8.60 177 252 1.7E-6 T 19-04-2016 APA12_RS08725 64b168467602e2f6eccfd09928fe7b1b 453 Pfam PF16193 AAA C-terminal domain 207 280 2.9E-19 T 19-04-2016 IPR032423 AAA ATPase, C-terminal domain APA12_RS08725 64b168467602e2f6eccfd09928fe7b1b 453 SMART SM00382 72 188 8.2E-13 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS08725 64b168467602e2f6eccfd09928fe7b1b 453 Gene3D G3DSA:1.10.3710.10 361 452 7.4E-32 T 19-04-2016 APA12_RS08725 64b168467602e2f6eccfd09928fe7b1b 453 SUPERFAMILY SSF48019 266 450 3.74E-76 T 19-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 APA12_RS08725 64b168467602e2f6eccfd09928fe7b1b 453 Gene3D G3DSA:1.20.272.10 262 360 4.2E-45 T 19-04-2016 APA12_RS08725 64b168467602e2f6eccfd09928fe7b1b 453 Pfam PF12002 MgsA AAA+ ATPase C terminal 281 446 5.3E-71 T 19-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal APA12_RS04495 ae30ca95f716bbd56f656617748d9533 734 Pfam PF04632 Fusaric acid resistance protein family 36 716 3.8E-138 T 19-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 APA12_RS04495 ae30ca95f716bbd56f656617748d9533 734 PANTHER PTHR30509 27 273 8.1E-67 T 19-04-2016 APA12_RS04495 ae30ca95f716bbd56f656617748d9533 734 PANTHER PTHR30509 352 693 8.1E-67 T 19-04-2016 APA12_RS04495 ae30ca95f716bbd56f656617748d9533 734 PANTHER PTHR30509:SF1 27 273 8.1E-67 T 19-04-2016 APA12_RS04495 ae30ca95f716bbd56f656617748d9533 734 PANTHER PTHR30509:SF1 352 693 8.1E-67 T 19-04-2016 APA12_RS03325 d4c52d5b2e8bd3a9ba51208805a36495 361 PANTHER PTHR22572 124 319 7.0E-52 T 19-04-2016 APA12_RS03325 d4c52d5b2e8bd3a9ba51208805a36495 361 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 27 349 33.547 T 19-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 APA12_RS03325 d4c52d5b2e8bd3a9ba51208805a36495 361 PANTHER PTHR22572:SF117 124 319 7.0E-52 T 19-04-2016 APA12_RS03325 d4c52d5b2e8bd3a9ba51208805a36495 361 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 246 281 4.0E-5 T 19-04-2016 IPR001451 Hexapeptide repeat APA12_RS03325 d4c52d5b2e8bd3a9ba51208805a36495 361 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 153 186 8.5E-8 T 19-04-2016 IPR001451 Hexapeptide repeat APA12_RS03325 d4c52d5b2e8bd3a9ba51208805a36495 361 SUPERFAMILY SSF51161 56 340 8.85E-73 T 19-04-2016 IPR011004 Trimeric LpxA-like APA12_RS03325 d4c52d5b2e8bd3a9ba51208805a36495 361 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 50 114 2.6E-20 T 19-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 APA12_RS03325 d4c52d5b2e8bd3a9ba51208805a36495 361 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 49 349 4.2E-101 T 19-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 APA12_RS03325 d4c52d5b2e8bd3a9ba51208805a36495 361 Gene3D G3DSA:2.160.10.10 124 173 1.0E-14 T 19-04-2016 APA12_RS03325 d4c52d5b2e8bd3a9ba51208805a36495 361 Gene3D G3DSA:2.160.10.10 174 333 2.2E-37 T 19-04-2016 APA12_RS06090 923e9213aa5b6935fb07917d92332e31 255 Pfam PF01259 SAICAR synthetase 6 235 1.7E-60 T 19-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 APA12_RS06090 923e9213aa5b6935fb07917d92332e31 255 PANTHER PTHR11609 3 238 8.1E-119 T 19-04-2016 APA12_RS06090 923e9213aa5b6935fb07917d92332e31 255 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 19-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 APA12_RS06090 923e9213aa5b6935fb07917d92332e31 255 SUPERFAMILY SSF56104 4 236 5.23E-78 T 19-04-2016 APA12_RS06090 923e9213aa5b6935fb07917d92332e31 255 PANTHER PTHR11609:SF2 3 238 8.1E-119 T 19-04-2016 APA12_RS06090 923e9213aa5b6935fb07917d92332e31 255 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 4 237 3.3E-68 T 19-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 APA12_RS06090 923e9213aa5b6935fb07917d92332e31 255 Gene3D G3DSA:3.30.470.20 94 223 9.6E-51 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APA12_RS06090 923e9213aa5b6935fb07917d92332e31 255 Gene3D G3DSA:3.30.200.20 6 93 2.1E-36 T 19-04-2016 APA12_RS06090 923e9213aa5b6935fb07917d92332e31 255 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 238 32.514 T 19-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 APA12_RS06090 923e9213aa5b6935fb07917d92332e31 255 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 19-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 APA12_RS11280 55f57f2d81b6fe1a645dca24cc1c13d3 247 PANTHER PTHR11785:SF416 49 227 1.2E-21 T 19-04-2016 APA12_RS11280 55f57f2d81b6fe1a645dca24cc1c13d3 247 Pfam PF13520 Amino acid permease 7 209 4.5E-19 T 19-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APA12_RS11280 55f57f2d81b6fe1a645dca24cc1c13d3 247 PANTHER PTHR11785 49 227 1.2E-21 T 19-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APA12_RS11895 0ed131bf53b590afbb612d1fc65d7222 232 PIRSF PIRSF009467 14 232 2.9E-59 T 19-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 APA12_RS11895 0ed131bf53b590afbb612d1fc65d7222 232 PANTHER PTHR33620 4 232 2.0E-33 T 19-04-2016 APA12_RS11895 0ed131bf53b590afbb612d1fc65d7222 232 Hamap MF_01385 Urease accessory protein UreF [ureF]. 16 232 27.581 T 19-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 APA12_RS11895 0ed131bf53b590afbb612d1fc65d7222 232 Pfam PF01730 UreF 48 189 6.3E-26 T 19-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 APA12_RS01430 66c9ac67ba28aad61f69168d86a9b61e 202 SUPERFAMILY SSF143456 18 202 2.35E-49 T 19-04-2016 APA12_RS01430 66c9ac67ba28aad61f69168d86a9b61e 202 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 18 202 28.898 T 19-04-2016 IPR003774 Protein of unknown function UPF0301 APA12_RS01430 66c9ac67ba28aad61f69168d86a9b61e 202 PANTHER PTHR30327:SF1 19 202 8.6E-44 T 19-04-2016 APA12_RS01430 66c9ac67ba28aad61f69168d86a9b61e 202 Pfam PF02622 Uncharacterized ACR, COG1678 29 187 2.6E-40 T 19-04-2016 IPR003774 Protein of unknown function UPF0301 APA12_RS01430 66c9ac67ba28aad61f69168d86a9b61e 202 Gene3D G3DSA:3.40.1740.10 145 192 5.7E-27 T 19-04-2016 APA12_RS01430 66c9ac67ba28aad61f69168d86a9b61e 202 Gene3D G3DSA:3.40.1740.10 15 58 5.7E-27 T 19-04-2016 APA12_RS01430 66c9ac67ba28aad61f69168d86a9b61e 202 PANTHER PTHR30327 19 202 8.6E-44 T 19-04-2016 APA12_RS01430 66c9ac67ba28aad61f69168d86a9b61e 202 Gene3D G3DSA:3.30.70.1300 65 144 3.0E-19 T 19-04-2016 APA12_RS07160 9d5d4489567bec38d57bbc6c83babc5d 426 PANTHER PTHR10909:SF334 14 313 6.3E-79 T 19-04-2016 APA12_RS07160 9d5d4489567bec38d57bbc6c83babc5d 426 PANTHER PTHR10909:SF334 331 416 6.3E-79 T 19-04-2016 APA12_RS07160 9d5d4489567bec38d57bbc6c83babc5d 426 Gene3D G3DSA:1.20.140.10 218 402 2.1E-43 T 19-04-2016 APA12_RS07160 9d5d4489567bec38d57bbc6c83babc5d 426 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 127 216 7.8E-9 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 APA12_RS07160 9d5d4489567bec38d57bbc6c83babc5d 426 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 248 382 2.1E-11 T 19-04-2016 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain APA12_RS07160 9d5d4489567bec38d57bbc6c83babc5d 426 Gene3D G3DSA:2.40.110.10 149 217 3.3E-19 T 19-04-2016 APA12_RS07160 9d5d4489567bec38d57bbc6c83babc5d 426 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 20 121 8.7E-6 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 APA12_RS07160 9d5d4489567bec38d57bbc6c83babc5d 426 Gene3D G3DSA:1.10.540.10 4 116 8.8E-19 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 APA12_RS07160 9d5d4489567bec38d57bbc6c83babc5d 426 SUPERFAMILY SSF56645 10 225 6.02E-42 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 APA12_RS07160 9d5d4489567bec38d57bbc6c83babc5d 426 PANTHER PTHR10909 14 313 6.3E-79 T 19-04-2016 APA12_RS07160 9d5d4489567bec38d57bbc6c83babc5d 426 PANTHER PTHR10909 331 416 6.3E-79 T 19-04-2016 APA12_RS07160 9d5d4489567bec38d57bbc6c83babc5d 426 SUPERFAMILY SSF47203 239 389 1.54E-12 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APA12_RS04605 e4e5366326a84e1913bbf3307d9aace8 162 PIRSF PIRSF000239 2 159 6.8E-21 T 19-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 APA12_RS04605 e4e5366326a84e1913bbf3307d9aace8 162 PANTHER PTHR10681 7 158 3.3E-51 T 19-04-2016 APA12_RS04605 e4e5366326a84e1913bbf3307d9aace8 162 Gene3D G3DSA:3.40.30.10 3 158 2.4E-54 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS04605 e4e5366326a84e1913bbf3307d9aace8 162 SUPERFAMILY SSF52833 6 158 3.11E-52 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS04605 e4e5366326a84e1913bbf3307d9aace8 162 Pfam PF00578 AhpC/TSA family 9 137 2.3E-39 T 19-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 APA12_RS07690 f7683670e8510fbbe471ce9debbff383 549 PANTHER PTHR33938 109 545 5.1E-84 T 19-04-2016 IPR011118 Tannase/feruloyl esterase MetaCyc: PWY-6784 APA12_RS07690 f7683670e8510fbbe471ce9debbff383 549 PANTHER PTHR33938:SF4 109 545 5.1E-84 T 19-04-2016 APA12_RS07690 f7683670e8510fbbe471ce9debbff383 549 Pfam PF07519 Tannase and feruloyl esterase 110 542 2.2E-93 T 19-04-2016 IPR011118 Tannase/feruloyl esterase MetaCyc: PWY-6784 APA12_RS07690 f7683670e8510fbbe471ce9debbff383 549 SUPERFAMILY SSF53474 121 270 3.57E-15 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS07690 f7683670e8510fbbe471ce9debbff383 549 SUPERFAMILY SSF53474 391 493 3.57E-15 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS07690 f7683670e8510fbbe471ce9debbff383 549 Gene3D G3DSA:3.40.50.1820 159 257 6.1E-12 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS07690 f7683670e8510fbbe471ce9debbff383 549 Gene3D G3DSA:3.40.50.1820 416 475 6.1E-12 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS05750 f3abefd77f75d21eded4821b1d547002 508 PANTHER PTHR11785 1 146 6.8E-128 T 19-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APA12_RS05750 f3abefd77f75d21eded4821b1d547002 508 PANTHER PTHR11785 168 505 6.8E-128 T 19-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APA12_RS05750 f3abefd77f75d21eded4821b1d547002 508 PANTHER PTHR11785:SF342 1 146 6.8E-128 T 19-04-2016 APA12_RS05750 f3abefd77f75d21eded4821b1d547002 508 PANTHER PTHR11785:SF342 168 505 6.8E-128 T 19-04-2016 APA12_RS05750 f3abefd77f75d21eded4821b1d547002 508 PIRSF PIRSF006060 10 508 2.8E-89 T 19-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APA12_RS05750 f3abefd77f75d21eded4821b1d547002 508 Pfam PF13520 Amino acid permease 29 456 5.4E-56 T 19-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APA12_RS07590 f6963aa6a5093beb95b65f00c1ec08a3 243 Pfam PF06912 Protein of unknown function (DUF1275) 19 228 2.8E-37 T 19-04-2016 IPR010699 Protein of unknown function DUF1275 APA12_RS07590 f6963aa6a5093beb95b65f00c1ec08a3 243 PANTHER PTHR37314:SF1 4 243 1.1E-21 T 19-04-2016 APA12_RS07590 f6963aa6a5093beb95b65f00c1ec08a3 243 PANTHER PTHR37314 4 243 1.1E-21 T 19-04-2016 APA12_RS06450 e6a3bdde4e5336eb9e924d974a17fb52 263 Pfam PF00005 ABC transporter 23 164 4.5E-33 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS06450 e6a3bdde4e5336eb9e924d974a17fb52 263 Gene3D G3DSA:3.40.50.300 4 221 1.6E-62 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS06450 e6a3bdde4e5336eb9e924d974a17fb52 263 SUPERFAMILY SSF52540 6 230 1.0E-61 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS06450 e6a3bdde4e5336eb9e924d974a17fb52 263 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APA12_RS06450 e6a3bdde4e5336eb9e924d974a17fb52 263 PANTHER PTHR24220:SF10 7 234 2.3E-80 T 19-04-2016 APA12_RS06450 e6a3bdde4e5336eb9e924d974a17fb52 263 PANTHER PTHR24220 7 234 2.3E-80 T 19-04-2016 APA12_RS06450 e6a3bdde4e5336eb9e924d974a17fb52 263 SMART SM00382 31 224 2.7E-14 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS11795 277548ffc507b2409801e88bfd0c73f6 660 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 41 660 32.321 T 19-04-2016 IPR023051 Potassium uptake protein, low affinity, Kup APA12_RS11795 277548ffc507b2409801e88bfd0c73f6 660 PANTHER PTHR30540 53 593 3.7E-222 T 19-04-2016 APA12_RS11795 277548ffc507b2409801e88bfd0c73f6 660 PANTHER PTHR30540:SF7 53 593 3.7E-222 T 19-04-2016 APA12_RS11795 277548ffc507b2409801e88bfd0c73f6 660 Pfam PF02705 K+ potassium transporter 50 582 2.1E-204 T 19-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 APA12_RS05895 2cde2814a439a0e702678f914aa94724 331 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 5 330 33.484 T 19-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 APA12_RS05895 2cde2814a439a0e702678f914aa94724 331 SUPERFAMILY SSF52540 56 192 1.12E-9 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05895 2cde2814a439a0e702678f914aa94724 331 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 21 323 1.3E-67 T 19-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 APA12_RS05895 2cde2814a439a0e702678f914aa94724 331 PANTHER PTHR30160 32 297 2.0E-60 T 19-04-2016 APA12_RS05895 2cde2814a439a0e702678f914aa94724 331 Gene3D G3DSA:3.40.50.300 57 149 3.4E-4 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05895 2cde2814a439a0e702678f914aa94724 331 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 20 321 4.8E-85 T 19-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 APA12_RS05895 2cde2814a439a0e702678f914aa94724 331 PANTHER PTHR30160:SF13 32 297 2.0E-60 T 19-04-2016 APA12_RS09465 8fefcc4700365a451e22a6aac37c274f 225 PANTHER PTHR30629 3 179 1.0E-21 T 19-04-2016 APA12_RS09465 8fefcc4700365a451e22a6aac37c274f 225 Gene3D G3DSA:1.10.150.130 100 192 8.1E-11 T 19-04-2016 IPR023109 Integrase/recombinase, N-terminal APA12_RS09465 8fefcc4700365a451e22a6aac37c274f 225 SUPERFAMILY SSF56349 100 203 2.59E-14 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APA12_RS09465 8fefcc4700365a451e22a6aac37c274f 225 Pfam PF13356 Domain of unknown function (DUF4102) 9 89 2.0E-10 T 19-04-2016 IPR025166 Domain of unknown function DUF4102 APA12_RS10105 f61ee21649d316111a7a4d443e559c2b 72 Gene3D G3DSA:2.40.50.140 1 72 1.7E-39 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS10105 f61ee21649d316111a7a4d443e559c2b 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 5.7E-35 T 19-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 APA12_RS10105 f61ee21649d316111a7a4d443e559c2b 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.489 T 19-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 APA12_RS10105 f61ee21649d316111a7a4d443e559c2b 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 4.1E-27 T 19-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 APA12_RS10105 f61ee21649d316111a7a4d443e559c2b 72 SMART SM00316 4 72 0.002 T 19-04-2016 IPR022967 RNA-binding domain, S1 APA12_RS10105 f61ee21649d316111a7a4d443e559c2b 72 PANTHER PTHR33370 1 72 8.3E-44 T 19-04-2016 APA12_RS10105 f61ee21649d316111a7a4d443e559c2b 72 SUPERFAMILY SSF50249 1 71 1.39E-27 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS10775 93d7e59e77b73effea89839093f25a76 261 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 246 1.2E-20 T 19-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APA12_RS10775 93d7e59e77b73effea89839093f25a76 261 SUPERFAMILY SSF56219 1 254 1.57E-66 T 19-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APA12_RS10775 93d7e59e77b73effea89839093f25a76 261 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 19-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 APA12_RS10775 93d7e59e77b73effea89839093f25a76 261 Gene3D G3DSA:3.60.10.10 1 254 1.4E-71 T 19-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APA12_RS10775 93d7e59e77b73effea89839093f25a76 261 PANTHER PTHR22748:SF9 1 259 9.0E-91 T 19-04-2016 APA12_RS10775 93d7e59e77b73effea89839093f25a76 261 PANTHER PTHR22748 1 259 9.0E-91 T 19-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 APA12_RS10775 93d7e59e77b73effea89839093f25a76 261 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 254 1.0E-59 T 19-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 APA12_RS10775 93d7e59e77b73effea89839093f25a76 261 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 253 1.7E-59 T 19-04-2016 APA12_RS07640 57595d5e395830df942bc21398b3f397 347 PANTHER PTHR24220 12 325 4.9E-136 T 19-04-2016 APA12_RS07640 57595d5e395830df942bc21398b3f397 347 Gene3D G3DSA:3.40.50.300 9 262 1.5E-69 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS07640 57595d5e395830df942bc21398b3f397 347 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 305 1.9E-17 T 19-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APA12_RS07640 57595d5e395830df942bc21398b3f397 347 SUPERFAMILY SSF52540 10 259 6.46E-61 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS07640 57595d5e395830df942bc21398b3f397 347 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 239 324 1.2E-21 T 19-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APA12_RS07640 57595d5e395830df942bc21398b3f397 347 PANTHER PTHR24220:SF535 12 325 4.9E-136 T 19-04-2016 APA12_RS07640 57595d5e395830df942bc21398b3f397 347 SMART SM00382 39 246 2.6E-13 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS07640 57595d5e395830df942bc21398b3f397 347 Pfam PF00005 ABC transporter 31 188 7.7E-24 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS07355 764775250670c5296db2fce862d02667 209 PANTHER PTHR32439:SF1 1 204 1.7E-67 T 19-04-2016 APA12_RS07355 764775250670c5296db2fce862d02667 209 SUPERFAMILY SSF63965 4 206 9.16E-72 T 19-04-2016 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 APA12_RS07355 764775250670c5296db2fce862d02667 209 PANTHER PTHR32439 1 204 1.7E-67 T 19-04-2016 APA12_RS07355 764775250670c5296db2fce862d02667 209 Gene3D G3DSA:3.40.50.10230 3 205 2.4E-80 T 19-04-2016 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 APA12_RS07355 764775250670c5296db2fce862d02667 209 Pfam PF02570 Precorrin-8X methylmutase 13 205 4.0E-73 T 19-04-2016 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 APA12_RS10745 11dac87e8a5496b0185a745a6e3ff034 288 Gene3D G3DSA:1.10.10.10 114 190 1.6E-30 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS10745 11dac87e8a5496b0185a745a6e3ff034 288 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 35 201 9.4E-30 T 19-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 APA12_RS10745 11dac87e8a5496b0185a745a6e3ff034 288 PANTHER PTHR34298:SF2 1 202 8.7E-46 T 19-04-2016 APA12_RS10745 11dac87e8a5496b0185a745a6e3ff034 288 PANTHER PTHR34298 1 202 8.7E-46 T 19-04-2016 APA12_RS10745 11dac87e8a5496b0185a745a6e3ff034 288 SUPERFAMILY SSF46785 29 113 5.85E-12 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS10745 11dac87e8a5496b0185a745a6e3ff034 288 SUPERFAMILY SSF46785 115 190 6.35E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS10745 11dac87e8a5496b0185a745a6e3ff034 288 Pfam PF04079 Segregation and condensation complex subunit ScpB 35 198 1.6E-45 T 19-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 APA12_RS10745 11dac87e8a5496b0185a745a6e3ff034 288 Gene3D G3DSA:1.10.10.10 27 113 1.5E-18 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS04875 3b68b02d8ee1b1bec9f9c1a65323b22d 411 Gene3D G3DSA:2.40.50.100 203 234 8.9E-20 T 19-04-2016 APA12_RS04875 3b68b02d8ee1b1bec9f9c1a65323b22d 411 Gene3D G3DSA:2.40.50.100 95 128 8.9E-20 T 19-04-2016 APA12_RS04875 3b68b02d8ee1b1bec9f9c1a65323b22d 411 PANTHER PTHR30469 69 408 2.0E-132 T 19-04-2016 APA12_RS04875 3b68b02d8ee1b1bec9f9c1a65323b22d 411 PANTHER PTHR30469:SF12 69 408 2.0E-132 T 19-04-2016 IPR022824 Multidrug resistance protein MdtA APA12_RS04875 3b68b02d8ee1b1bec9f9c1a65323b22d 411 SUPERFAMILY SSF111369 87 321 2.22E-53 T 19-04-2016 APA12_RS04875 3b68b02d8ee1b1bec9f9c1a65323b22d 411 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 96 317 7.3E-16 T 19-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APA12_RS04875 3b68b02d8ee1b1bec9f9c1a65323b22d 411 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 70 398 1.1E-76 T 19-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APA12_RS00415 57ba1f160ff351cbfd46350f64d39683 177 Gene3D G3DSA:3.40.50.2020 8 177 1.3E-61 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like APA12_RS00415 57ba1f160ff351cbfd46350f64d39683 177 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 9 175 34.1 T 19-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 APA12_RS00415 57ba1f160ff351cbfd46350f64d39683 177 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 9 174 1.0E-58 T 19-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 APA12_RS00415 57ba1f160ff351cbfd46350f64d39683 177 Pfam PF00156 Phosphoribosyl transferase domain 46 169 7.4E-18 T 19-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APA12_RS00415 57ba1f160ff351cbfd46350f64d39683 177 SUPERFAMILY SSF53271 4 172 2.1E-49 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like APA12_RS00415 57ba1f160ff351cbfd46350f64d39683 177 PANTHER PTHR32315 9 177 1.7E-77 T 19-04-2016 APA12_RS07320 cad89be16f4fb179785deffc4fda7e7a 357 SUPERFAMILY SSF111342 3 284 2.09E-81 T 19-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 APA12_RS07320 cad89be16f4fb179785deffc4fda7e7a 357 Pfam PF01888 CbiD 8 266 7.3E-88 T 19-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 APA12_RS07320 cad89be16f4fb179785deffc4fda7e7a 357 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 8 357 26.989 T 19-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 APA12_RS07320 cad89be16f4fb179785deffc4fda7e7a 357 PIRSF PIRSF026782 4 357 2.7E-118 T 19-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 APA12_RS07320 cad89be16f4fb179785deffc4fda7e7a 357 PANTHER PTHR35863:SF1 1 356 3.8E-95 T 19-04-2016 APA12_RS07320 cad89be16f4fb179785deffc4fda7e7a 357 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 15 314 3.2E-53 T 19-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 APA12_RS07320 cad89be16f4fb179785deffc4fda7e7a 357 Gene3D G3DSA:3.30.2110.10 10 181 7.9E-56 T 19-04-2016 APA12_RS07320 cad89be16f4fb179785deffc4fda7e7a 357 PANTHER PTHR35863 1 356 3.8E-95 T 19-04-2016 APA12_RS12015 394c69a62a24a4cfb3f62b54b9934ad9 358 PANTHER PTHR30386 13 341 9.6E-93 T 19-04-2016 APA12_RS12015 394c69a62a24a4cfb3f62b54b9934ad9 358 Pfam PF00529 HlyD membrane-fusion protein of T1SS 15 340 1.5E-6 T 19-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APA12_RS12015 394c69a62a24a4cfb3f62b54b9934ad9 358 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 48 289 2.7E-16 T 19-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APA12_RS12015 394c69a62a24a4cfb3f62b54b9934ad9 358 SUPERFAMILY SSF111369 159 270 6.54E-11 T 19-04-2016 APA12_RS12015 394c69a62a24a4cfb3f62b54b9934ad9 358 PANTHER PTHR30386:SF7 13 341 9.6E-93 T 19-04-2016 APA12_RS12015 394c69a62a24a4cfb3f62b54b9934ad9 358 Gene3D G3DSA:2.40.50.100 48 79 1.3E-16 T 19-04-2016 APA12_RS12015 394c69a62a24a4cfb3f62b54b9934ad9 358 Gene3D G3DSA:2.40.50.100 210 243 1.3E-16 T 19-04-2016 APA12_RS12015 394c69a62a24a4cfb3f62b54b9934ad9 358 SUPERFAMILY SSF111369 47 134 1.16E-8 T 19-04-2016 APA12_RS04465 36e1e2a4f8c47a8160d464eface90cf4 299 PANTHER PTHR30188 16 267 3.5E-17 T 19-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 APA12_RS04465 36e1e2a4f8c47a8160d464eface90cf4 299 Pfam PF02405 Permease MlaE 86 296 1.2E-33 T 19-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 APA12_RS02020 09dde62c418c89cd97b7629efc81a546 620 Pfam PF13432 Tetratricopeptide repeat 450 513 0.0024 T 19-04-2016 APA12_RS02020 09dde62c418c89cd97b7629efc81a546 620 SMART SM00028 513 546 31.0 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APA12_RS02020 09dde62c418c89cd97b7629efc81a546 620 SMART SM00028 547 580 3.8 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APA12_RS02020 09dde62c418c89cd97b7629efc81a546 620 SMART SM00028 478 512 290.0 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APA12_RS02020 09dde62c418c89cd97b7629efc81a546 620 SMART SM00028 444 477 0.23 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APA12_RS02020 09dde62c418c89cd97b7629efc81a546 620 SMART SM00028 406 439 0.089 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APA12_RS02020 09dde62c418c89cd97b7629efc81a546 620 SUPERFAMILY SSF48452 311 436 1.14E-12 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS02020 09dde62c418c89cd97b7629efc81a546 620 PANTHER PTHR23083 296 574 9.6E-39 T 19-04-2016 APA12_RS02020 09dde62c418c89cd97b7629efc81a546 620 PANTHER PTHR23083 59 93 9.6E-39 T 19-04-2016 APA12_RS02020 09dde62c418c89cd97b7629efc81a546 620 PANTHER PTHR23083 128 253 9.6E-39 T 19-04-2016 APA12_RS02020 09dde62c418c89cd97b7629efc81a546 620 SUPERFAMILY SSF48452 126 297 3.04E-7 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS02020 09dde62c418c89cd97b7629efc81a546 620 Pfam PF13414 TPR repeat 524 561 2.4E-9 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS02020 09dde62c418c89cd97b7629efc81a546 620 Gene3D G3DSA:1.25.40.10 126 251 1.2E-7 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS02020 09dde62c418c89cd97b7629efc81a546 620 PANTHER PTHR23083:SF195 296 574 9.6E-39 T 19-04-2016 APA12_RS02020 09dde62c418c89cd97b7629efc81a546 620 PANTHER PTHR23083:SF195 59 93 9.6E-39 T 19-04-2016 APA12_RS02020 09dde62c418c89cd97b7629efc81a546 620 PANTHER PTHR23083:SF195 128 253 9.6E-39 T 19-04-2016 APA12_RS02020 09dde62c418c89cd97b7629efc81a546 620 Gene3D G3DSA:1.25.40.10 323 578 2.7E-44 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS02020 09dde62c418c89cd97b7629efc81a546 620 SUPERFAMILY SSF48452 403 578 1.77E-32 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS02020 09dde62c418c89cd97b7629efc81a546 620 Pfam PF09976 Tetratricopeptide repeat-like domain 338 440 1.3E-6 T 19-04-2016 IPR018704 Tetratricopeptide repeat-like domain APA12_RS09295 81861482c6fd40e6277748e16ded5ef6 330 TIGRFAM TIGR00586 mutt: mutator mutT protein 199 326 9.0E-31 T 19-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 APA12_RS09295 81861482c6fd40e6277748e16ded5ef6 330 SUPERFAMILY SSF55811 195 326 2.44E-39 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APA12_RS09295 81861482c6fd40e6277748e16ded5ef6 330 PANTHER PTHR13256 16 180 1.9E-36 T 19-04-2016 APA12_RS09295 81861482c6fd40e6277748e16ded5ef6 330 Gene3D G3DSA:3.40.630.30 5 181 4.3E-46 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase APA12_RS09295 81861482c6fd40e6277748e16ded5ef6 330 PRINTS PR00502 NUDIX hydrolase family signature 245 260 6.0E-9 T 19-04-2016 IPR020476 NUDIX hydrolase APA12_RS09295 81861482c6fd40e6277748e16ded5ef6 330 PRINTS PR00502 NUDIX hydrolase family signature 231 245 6.0E-9 T 19-04-2016 IPR020476 NUDIX hydrolase APA12_RS09295 81861482c6fd40e6277748e16ded5ef6 330 SUPERFAMILY SSF55729 7 177 1.28E-41 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase APA12_RS09295 81861482c6fd40e6277748e16ded5ef6 330 Pfam PF13302 Acetyltransferase (GNAT) domain 16 155 1.5E-31 T 19-04-2016 IPR000182 GNAT domain GO:0008080 APA12_RS09295 81861482c6fd40e6277748e16ded5ef6 330 Gene3D G3DSA:3.90.79.10 204 328 1.6E-36 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APA12_RS09295 81861482c6fd40e6277748e16ded5ef6 330 Pfam PF00293 NUDIX domain 205 325 2.7E-20 T 19-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APA12_RS09295 81861482c6fd40e6277748e16ded5ef6 330 ProSitePatterns PS00893 Nudix box signature. 236 257 - T 19-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APA12_RS04375 c61c5cf879d599cdcb1781800e485ab7 447 SUPERFAMILY SSF50621 278 440 9.21E-49 T 19-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 APA12_RS04375 c61c5cf879d599cdcb1781800e485ab7 447 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 249 264 - T 19-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 APA12_RS04375 c61c5cf879d599cdcb1781800e485ab7 447 Gene3D G3DSA:2.40.37.10 289 441 2.9E-42 T 19-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 APA12_RS04375 c61c5cf879d599cdcb1781800e485ab7 447 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 308 415 3.4E-15 T 19-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 APA12_RS04375 c61c5cf879d599cdcb1781800e485ab7 447 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 213 226 8.4E-19 T 19-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APA12_RS04375 c61c5cf879d599cdcb1781800e485ab7 447 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 100 112 8.4E-19 T 19-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APA12_RS04375 c61c5cf879d599cdcb1781800e485ab7 447 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 80 98 8.4E-19 T 19-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APA12_RS04375 c61c5cf879d599cdcb1781800e485ab7 447 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 293 312 8.4E-19 T 19-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APA12_RS04375 c61c5cf879d599cdcb1781800e485ab7 447 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 395 408 8.4E-19 T 19-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APA12_RS04375 c61c5cf879d599cdcb1781800e485ab7 447 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 80 98 - T 19-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 APA12_RS04375 c61c5cf879d599cdcb1781800e485ab7 447 SUPERFAMILY SSF51419 47 305 5.23E-71 T 19-04-2016 IPR029066 PLP-binding barrel APA12_RS04375 c61c5cf879d599cdcb1781800e485ab7 447 PANTHER PTHR11482:SF5 32 445 1.3E-146 T 19-04-2016 APA12_RS04375 c61c5cf879d599cdcb1781800e485ab7 447 PRINTS PR01181 Diaminopimelate decarboxylase signature 98 115 5.2E-26 T 19-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APA12_RS04375 c61c5cf879d599cdcb1781800e485ab7 447 PRINTS PR01181 Diaminopimelate decarboxylase signature 405 427 5.2E-26 T 19-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APA12_RS04375 c61c5cf879d599cdcb1781800e485ab7 447 PRINTS PR01181 Diaminopimelate decarboxylase signature 322 340 5.2E-26 T 19-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APA12_RS04375 c61c5cf879d599cdcb1781800e485ab7 447 PRINTS PR01181 Diaminopimelate decarboxylase signature 187 196 5.2E-26 T 19-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APA12_RS04375 c61c5cf879d599cdcb1781800e485ab7 447 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 31 437 1.3E-131 T 19-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APA12_RS04375 c61c5cf879d599cdcb1781800e485ab7 447 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 36 438 38.476 T 19-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APA12_RS04375 c61c5cf879d599cdcb1781800e485ab7 447 PANTHER PTHR11482 32 445 1.3E-146 T 19-04-2016 APA12_RS04375 c61c5cf879d599cdcb1781800e485ab7 447 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 62 300 3.4E-51 T 19-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 APA12_RS04375 c61c5cf879d599cdcb1781800e485ab7 447 Gene3D G3DSA:3.20.20.10 57 288 1.4E-76 T 19-04-2016 IPR029066 PLP-binding barrel APA12_RS06455 503c169900aa59658a45ec01c5293c77 255 SUPERFAMILY SSF161098 52 236 3.14E-27 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS06455 503c169900aa59658a45ec01c5293c77 255 PANTHER PTHR30151:SF9 1 249 8.4E-60 T 19-04-2016 APA12_RS06455 503c169900aa59658a45ec01c5293c77 255 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 72 247 3.1E-23 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS06455 503c169900aa59658a45ec01c5293c77 255 PANTHER PTHR30151 1 249 8.4E-60 T 19-04-2016 APA12_RS06455 503c169900aa59658a45ec01c5293c77 255 Gene3D G3DSA:1.10.3720.10 7 237 3.7E-22 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS08685 4a7241c19e98419846de2f3ce47b7ffb 250 PANTHER PTHR32125:SF1 7 228 8.6E-93 T 19-04-2016 APA12_RS08685 4a7241c19e98419846de2f3ce47b7ffb 250 PANTHER PTHR32125 7 228 8.6E-93 T 19-04-2016 APA12_RS08685 4a7241c19e98419846de2f3ce47b7ffb 250 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 250 102.572 T 19-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APA12_RS08685 4a7241c19e98419846de2f3ce47b7ffb 250 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 25 221 2.8E-51 T 19-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APA12_RS08685 4a7241c19e98419846de2f3ce47b7ffb 250 SUPERFAMILY SSF75217 2 233 2.62E-90 T 19-04-2016 IPR029028 Alpha/beta knot methyltransferases APA12_RS08685 4a7241c19e98419846de2f3ce47b7ffb 250 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 5 233 6.7E-77 T 19-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APA12_RS08685 4a7241c19e98419846de2f3ce47b7ffb 250 Gene3D G3DSA:1.10.1270.20 163 238 1.7E-32 T 19-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APA12_RS08685 4a7241c19e98419846de2f3ce47b7ffb 250 Gene3D G3DSA:3.40.1280.10 3 160 9.0E-60 T 19-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APA12_RS08685 4a7241c19e98419846de2f3ce47b7ffb 250 PIRSF PIRSF000386 3 246 3.2E-89 T 19-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APA12_RS00490 4160df00bf6a9493b7551fde7a48b1fd 862 SMART SM00490 193 282 1.7E-12 T 19-04-2016 IPR001650 Helicase, C-terminal APA12_RS00490 4160df00bf6a9493b7551fde7a48b1fd 862 SUPERFAMILY SSF52540 25 130 1.36E-7 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS00490 4160df00bf6a9493b7551fde7a48b1fd 862 PANTHER PTHR12131 27 305 2.0E-103 T 19-04-2016 APA12_RS00490 4160df00bf6a9493b7551fde7a48b1fd 862 PANTHER PTHR12131:SF4 27 305 2.0E-103 T 19-04-2016 APA12_RS00490 4160df00bf6a9493b7551fde7a48b1fd 862 Pfam PF00271 Helicase conserved C-terminal domain 180 281 5.9E-8 T 19-04-2016 IPR001650 Helicase, C-terminal APA12_RS00490 4160df00bf6a9493b7551fde7a48b1fd 862 Gene3D G3DSA:3.40.50.300 181 286 6.7E-14 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS00490 4160df00bf6a9493b7551fde7a48b1fd 862 SUPERFAMILY SSF52540 150 404 1.21E-36 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS04600 982149bc81b37d6e56385443f4444235 1004 SUPERFAMILY SSF81593 855 1000 2.12E-22 T 19-04-2016 APA12_RS04600 982149bc81b37d6e56385443f4444235 1004 Gene3D G3DSA:3.30.460.10 663 839 1.1E-38 T 19-04-2016 APA12_RS04600 982149bc81b37d6e56385443f4444235 1004 Gene3D G3DSA:3.30.460.10 124 295 1.9E-48 T 19-04-2016 APA12_RS04600 982149bc81b37d6e56385443f4444235 1004 SUPERFAMILY SSF81593 297 467 6.75E-35 T 19-04-2016 APA12_RS04600 982149bc81b37d6e56385443f4444235 1004 Pfam PF08335 GlnD PII-uridylyltransferase 877 998 3.6E-11 T 19-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 APA12_RS04600 982149bc81b37d6e56385443f4444235 1004 Pfam PF08335 GlnD PII-uridylyltransferase 340 464 8.7E-35 T 19-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 APA12_RS04600 982149bc81b37d6e56385443f4444235 1004 SUPERFAMILY SSF81301 30 296 8.88E-63 T 19-04-2016 APA12_RS04600 982149bc81b37d6e56385443f4444235 1004 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 581 832 9.7E-48 T 19-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 APA12_RS04600 982149bc81b37d6e56385443f4444235 1004 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 46 287 5.7E-56 T 19-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 APA12_RS04600 982149bc81b37d6e56385443f4444235 1004 SUPERFAMILY SSF81301 553 836 3.47E-56 T 19-04-2016 APA12_RS04600 982149bc81b37d6e56385443f4444235 1004 PANTHER PTHR30621 340 1004 3.9E-188 T 19-04-2016 APA12_RS04600 982149bc81b37d6e56385443f4444235 1004 PANTHER PTHR30621 3 319 3.9E-188 T 19-04-2016 APA12_RS06550 5cc9d4948507633a51e70f43712c2cb0 530 Pfam PF01019 Gamma-glutamyltranspeptidase 25 525 1.3E-118 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APA12_RS06550 5cc9d4948507633a51e70f43712c2cb0 530 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 125 144 1.9E-23 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APA12_RS06550 5cc9d4948507633a51e70f43712c2cb0 530 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 32 57 1.9E-23 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APA12_RS06550 5cc9d4948507633a51e70f43712c2cb0 530 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 368 386 1.9E-23 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APA12_RS06550 5cc9d4948507633a51e70f43712c2cb0 530 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 399 414 1.9E-23 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APA12_RS06550 5cc9d4948507633a51e70f43712c2cb0 530 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 344 362 1.9E-23 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APA12_RS06550 5cc9d4948507633a51e70f43712c2cb0 530 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 252 271 1.9E-23 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APA12_RS06550 5cc9d4948507633a51e70f43712c2cb0 530 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 223 239 1.9E-23 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APA12_RS06550 5cc9d4948507633a51e70f43712c2cb0 530 PANTHER PTHR11686:SF8 9 530 2.1E-144 T 19-04-2016 APA12_RS06550 5cc9d4948507633a51e70f43712c2cb0 530 PANTHER PTHR11686 9 530 2.1E-144 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APA12_RS06550 5cc9d4948507633a51e70f43712c2cb0 530 SUPERFAMILY SSF56235 4 530 4.63E-144 T 19-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APA12_RS08835 be5ed8483b5a0d9a8b20c3fcf740ee82 210 Pfam PF00293 NUDIX domain 72 179 4.4E-10 T 19-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APA12_RS08835 be5ed8483b5a0d9a8b20c3fcf740ee82 210 SUPERFAMILY SSF55811 23 196 1.06E-22 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APA12_RS08835 be5ed8483b5a0d9a8b20c3fcf740ee82 210 Gene3D G3DSA:3.90.79.10 56 196 1.4E-20 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APA12_RS08835 be5ed8483b5a0d9a8b20c3fcf740ee82 210 PANTHER PTHR22769 12 204 2.1E-35 T 19-04-2016 APA12_RS08835 be5ed8483b5a0d9a8b20c3fcf740ee82 210 PANTHER PTHR22769:SF32 12 204 2.1E-35 T 19-04-2016 APA12_RS08835 be5ed8483b5a0d9a8b20c3fcf740ee82 210 Pfam PF12535 Hydrolase of X-linked nucleoside diphosphate N terminal 6 59 1.6E-26 T 19-04-2016 APA12_RS09030 003e3a90e3c3781c6fa816f76bd8e341 985 PANTHER PTHR11472 222 586 1.1E-62 T 19-04-2016 APA12_RS09030 003e3a90e3c3781c6fa816f76bd8e341 985 PANTHER PTHR11472 654 945 1.1E-62 T 19-04-2016 APA12_RS09030 003e3a90e3c3781c6fa816f76bd8e341 985 PANTHER PTHR11472:SF37 222 586 1.1E-62 T 19-04-2016 APA12_RS09030 003e3a90e3c3781c6fa816f76bd8e341 985 PANTHER PTHR11472:SF37 654 945 1.1E-62 T 19-04-2016 APA12_RS09030 003e3a90e3c3781c6fa816f76bd8e341 985 Gene3D G3DSA:3.40.50.300 822 943 3.7E-5 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS09030 003e3a90e3c3781c6fa816f76bd8e341 985 Gene3D G3DSA:3.40.50.300 250 322 6.8E-11 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS09030 003e3a90e3c3781c6fa816f76bd8e341 985 Gene3D G3DSA:3.40.50.300 400 457 6.8E-11 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS09030 003e3a90e3c3781c6fa816f76bd8e341 985 SUPERFAMILY SSF52540 775 942 4.99E-14 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS09030 003e3a90e3c3781c6fa816f76bd8e341 985 SUPERFAMILY SSF52540 721 735 4.99E-14 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS09030 003e3a90e3c3781c6fa816f76bd8e341 985 SUPERFAMILY SSF52540 391 472 4.99E-14 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS09030 003e3a90e3c3781c6fa816f76bd8e341 985 SUPERFAMILY SSF52540 249 297 4.99E-14 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS09030 003e3a90e3c3781c6fa816f76bd8e341 985 SMART SM00491 818 948 1.0E-8 T 19-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 APA12_RS09030 003e3a90e3c3781c6fa816f76bd8e341 985 Pfam PF13307 Helicase C-terminal domain 806 948 3.3E-18 T 19-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 APA12_RS05605 5774d53a0ac682eea2283140f0e93590 638 TIGRFAM TIGR01651 CobT: cobaltochelatase, CobT subunit 26 629 1.4E-231 T 19-04-2016 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 APA12_RS05605 5774d53a0ac682eea2283140f0e93590 638 Pfam PF06213 Cobalamin biosynthesis protein CobT 22 298 4.7E-72 T 19-04-2016 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 APA12_RS05605 5774d53a0ac682eea2283140f0e93590 638 Pfam PF11775 Cobalamin biosynthesis protein CobT VWA domain 411 628 2.7E-101 T 19-04-2016 IPR025861 Cobalamin biosynthesis protein CobT VWA domain KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 APA12_RS05605 5774d53a0ac682eea2283140f0e93590 638 SMART SM00327 422 624 1.0E-9 T 19-04-2016 IPR002035 von Willebrand factor, type A APA12_RS05605 5774d53a0ac682eea2283140f0e93590 638 Gene3D G3DSA:3.40.50.410 425 600 1.4E-6 T 19-04-2016 IPR002035 von Willebrand factor, type A APA12_RS05605 5774d53a0ac682eea2283140f0e93590 638 SUPERFAMILY SSF53300 425 620 1.95E-16 T 19-04-2016 IPR002035 von Willebrand factor, type A APA12_RS05605 5774d53a0ac682eea2283140f0e93590 638 PIRSF PIRSF031715 15 637 1.0E-242 T 19-04-2016 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 APA12_RS06640 213563ee7bf4a980467c0302b52345ea 456 PANTHER PTHR11699:SF205 1 455 1.5E-231 T 19-04-2016 APA12_RS06640 213563ee7bf4a980467c0302b52345ea 456 SUPERFAMILY SSF53720 3 455 7.46E-144 T 19-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APA12_RS06640 213563ee7bf4a980467c0302b52345ea 456 Gene3D G3DSA:3.40.309.10 244 428 1.3E-71 T 19-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APA12_RS06640 213563ee7bf4a980467c0302b52345ea 456 Gene3D G3DSA:3.40.605.10 3 243 1.3E-66 T 19-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APA12_RS06640 213563ee7bf4a980467c0302b52345ea 456 PANTHER PTHR11699 1 455 1.5E-231 T 19-04-2016 APA12_RS06640 213563ee7bf4a980467c0302b52345ea 456 Pfam PF00171 Aldehyde dehydrogenase family 4 452 6.5E-139 T 19-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APA12_RS06640 213563ee7bf4a980467c0302b52345ea 456 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 257 268 - T 19-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 APA12_RS00190 2b60b39346377045674fcf27a811c5c8 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 114 127 5.4E-35 T 19-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APA12_RS00190 2b60b39346377045674fcf27a811c5c8 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 233 250 5.4E-35 T 19-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APA12_RS00190 2b60b39346377045674fcf27a811c5c8 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 177 193 5.4E-35 T 19-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APA12_RS00190 2b60b39346377045674fcf27a811c5c8 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 150 168 5.4E-35 T 19-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APA12_RS00190 2b60b39346377045674fcf27a811c5c8 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 275 290 5.4E-35 T 19-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APA12_RS00190 2b60b39346377045674fcf27a811c5c8 340 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 161 320 1.5E-58 T 19-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 APA12_RS00190 2b60b39346377045674fcf27a811c5c8 340 PIRSF PIRSF000149 1 339 1.7E-120 T 19-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APA12_RS00190 2b60b39346377045674fcf27a811c5c8 340 Gene3D G3DSA:3.30.360.10 165 322 1.3E-66 T 19-04-2016 APA12_RS00190 2b60b39346377045674fcf27a811c5c8 340 SUPERFAMILY SSF51735 3 172 1.45E-51 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS00190 2b60b39346377045674fcf27a811c5c8 340 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 331 1.6E-120 T 19-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 APA12_RS00190 2b60b39346377045674fcf27a811c5c8 340 PANTHER PTHR10836 1 336 1.6E-169 T 19-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APA12_RS00190 2b60b39346377045674fcf27a811c5c8 340 Gene3D G3DSA:3.40.50.720 3 164 1.7E-65 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS00190 2b60b39346377045674fcf27a811c5c8 340 SUPERFAMILY SSF55347 156 321 6.55E-64 T 19-04-2016 APA12_RS00190 2b60b39346377045674fcf27a811c5c8 340 PANTHER PTHR10836:SF50 1 336 1.6E-169 T 19-04-2016 APA12_RS00190 2b60b39346377045674fcf27a811c5c8 340 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 156 1.5E-47 T 19-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 APA12_RS00190 2b60b39346377045674fcf27a811c5c8 340 SMART SM00846 3 156 3.6E-79 T 19-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 APA12_RS00190 2b60b39346377045674fcf27a811c5c8 340 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 154 161 - T 19-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 APA12_RS11290 2f4e3b105866bab8be56ce653ab8b8e3 227 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 176 9.3E-13 T 19-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 APA12_RS11290 2f4e3b105866bab8be56ce653ab8b8e3 227 SUPERFAMILY SSF51197 3 176 1.92E-6 T 19-04-2016 APA12_RS11290 2f4e3b105866bab8be56ce653ab8b8e3 227 PANTHER PTHR41536 2 227 5.2E-104 T 19-04-2016 APA12_RS11290 2f4e3b105866bab8be56ce653ab8b8e3 227 PANTHER PTHR41536:SF1 2 227 5.2E-104 T 19-04-2016 APA12_RS11290 2f4e3b105866bab8be56ce653ab8b8e3 227 SMART SM00702 1 177 2.2E-21 T 19-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 APA12_RS11290 2f4e3b105866bab8be56ce653ab8b8e3 227 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 227 43.011 T 19-04-2016 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 APA12_RS13735 a7bdfbfaadef5bcaf43a2034ecc5a8b9 87 PANTHER PTHR21152:SF23 4 86 5.1E-23 T 19-04-2016 APA12_RS13735 a7bdfbfaadef5bcaf43a2034ecc5a8b9 87 Gene3D G3DSA:3.40.640.10 3 87 5.5E-11 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APA12_RS13735 a7bdfbfaadef5bcaf43a2034ecc5a8b9 87 SUPERFAMILY SSF53383 3 87 6.11E-13 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APA12_RS13735 a7bdfbfaadef5bcaf43a2034ecc5a8b9 87 PANTHER PTHR21152 4 86 5.1E-23 T 19-04-2016 APA12_RS04345 d53f49eeb328235d9bc96785b1119412 363 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 339 2.1E-61 T 19-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 APA12_RS04345 d53f49eeb328235d9bc96785b1119412 363 PANTHER PTHR22893 1 340 9.6E-132 T 19-04-2016 APA12_RS04345 d53f49eeb328235d9bc96785b1119412 363 SUPERFAMILY SSF51395 1 347 9.95E-106 T 19-04-2016 APA12_RS04345 d53f49eeb328235d9bc96785b1119412 363 Gene3D G3DSA:3.20.20.70 1 343 9.3E-114 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS04345 d53f49eeb328235d9bc96785b1119412 363 PANTHER PTHR22893:SF7 1 340 9.6E-132 T 19-04-2016 APA12_RS11010 bf79406a50b244b458c48a61073a17a0 466 Gene3D G3DSA:3.20.20.140 68 376 7.0E-122 T 19-04-2016 APA12_RS11010 bf79406a50b244b458c48a61073a17a0 466 PANTHER PTHR11647 2 455 8.0E-264 T 19-04-2016 APA12_RS11010 bf79406a50b244b458c48a61073a17a0 466 PANTHER PTHR11647:SF69 2 455 8.0E-264 T 19-04-2016 APA12_RS11010 bf79406a50b244b458c48a61073a17a0 466 Pfam PF01979 Amidohydrolase family 50 437 8.0E-32 T 19-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APA12_RS11010 bf79406a50b244b458c48a61073a17a0 466 SUPERFAMILY SSF51338 3 66 7.92E-11 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APA12_RS11010 bf79406a50b244b458c48a61073a17a0 466 Gene3D G3DSA:2.30.40.10 2 67 2.6E-28 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APA12_RS11010 bf79406a50b244b458c48a61073a17a0 466 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 4 455 1.0E-180 T 19-04-2016 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: REACT_18266 APA12_RS11010 bf79406a50b244b458c48a61073a17a0 466 SUPERFAMILY SSF51338 347 457 1.99E-39 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APA12_RS11010 bf79406a50b244b458c48a61073a17a0 466 Gene3D G3DSA:2.30.40.10 377 460 3.0E-16 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APA12_RS11010 bf79406a50b244b458c48a61073a17a0 466 SUPERFAMILY SSF51556 54 383 5.71E-110 T 19-04-2016 IPR032466 Metal-dependent hydrolase APA12_RS04825 89397adf01ca09ac71f0871b75ae286a 339 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 63 158 1.3E-21 T 19-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APA12_RS04825 89397adf01ca09ac71f0871b75ae286a 339 Gene3D G3DSA:2.170.120.12 71 177 5.5E-44 T 19-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APA12_RS04825 89397adf01ca09ac71f0871b75ae286a 339 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 259 330 1.0E-33 T 19-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APA12_RS04825 89397adf01ca09ac71f0871b75ae286a 339 Gene3D G3DSA:3.30.1360.10 23 70 1.7E-8 T 19-04-2016 APA12_RS04825 89397adf01ca09ac71f0871b75ae286a 339 PANTHER PTHR32108:SF0 6 332 2.0E-137 T 19-04-2016 APA12_RS04825 89397adf01ca09ac71f0871b75ae286a 339 SUPERFAMILY SSF55257 153 237 5.1E-30 T 19-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APA12_RS04825 89397adf01ca09ac71f0871b75ae286a 339 SUPERFAMILY SSF55257 33 61 5.1E-30 T 19-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APA12_RS04825 89397adf01ca09ac71f0871b75ae286a 339 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 253 310 7.0E-25 T 19-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APA12_RS04825 89397adf01ca09ac71f0871b75ae286a 339 Gene3D G3DSA:1.10.150.20 248 330 9.8E-37 T 19-04-2016 APA12_RS04825 89397adf01ca09ac71f0871b75ae286a 339 SUPERFAMILY SSF47789 253 328 7.32E-27 T 19-04-2016 APA12_RS04825 89397adf01ca09ac71f0871b75ae286a 339 PANTHER PTHR32108 6 332 2.0E-137 T 19-04-2016 APA12_RS04825 89397adf01ca09ac71f0871b75ae286a 339 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 7 319 36.285 T 19-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APA12_RS04825 89397adf01ca09ac71f0871b75ae286a 339 SUPERFAMILY SSF56553 57 178 1.06E-42 T 19-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APA12_RS04825 89397adf01ca09ac71f0871b75ae286a 339 SMART SM00662 27 234 1.8E-95 T 19-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APA12_RS04825 89397adf01ca09ac71f0871b75ae286a 339 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 33 228 3.5E-24 T 19-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APA12_RS04825 89397adf01ca09ac71f0871b75ae286a 339 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 28 319 4.3E-117 T 19-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APA12_RS06915 baeb52834620bf4c378ae02b266eb853 290 Gene3D G3DSA:3.60.130.10 6 283 6.1E-96 T 19-04-2016 APA12_RS06915 baeb52834620bf4c378ae02b266eb853 290 SUPERFAMILY SSF51197 8 280 9.16E-93 T 19-04-2016 APA12_RS06915 baeb52834620bf4c378ae02b266eb853 290 PANTHER PTHR30468 4 280 9.1E-94 T 19-04-2016 APA12_RS06915 baeb52834620bf4c378ae02b266eb853 290 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 8 273 1.2E-65 T 19-04-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 APA12_RS06915 baeb52834620bf4c378ae02b266eb853 290 PANTHER PTHR30468:SF2 4 280 9.1E-94 T 19-04-2016 APA12_RS08475 ff9678df1a475c43a01f9678c685f6b5 996 Gene3D G3DSA:1.10.3210.10 527 714 4.3E-27 T 19-04-2016 IPR006674 HD domain APA12_RS08475 ff9678df1a475c43a01f9678c685f6b5 996 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 55 994 247.968 T 19-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 APA12_RS08475 ff9678df1a475c43a01f9678c685f6b5 996 SUPERFAMILY SSF81593 243 377 6.28E-11 T 19-04-2016 APA12_RS08475 ff9678df1a475c43a01f9678c685f6b5 996 SUPERFAMILY SSF55021 906 980 4.23E-12 T 19-04-2016 APA12_RS08475 ff9678df1a475c43a01f9678c685f6b5 996 Pfam PF01842 ACT domain 909 975 2.0E-6 T 19-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 APA12_RS08475 ff9678df1a475c43a01f9678c685f6b5 996 Pfam PF01966 HD domain 557 669 8.7E-10 T 19-04-2016 IPR006674 HD domain APA12_RS08475 ff9678df1a475c43a01f9678c685f6b5 996 PANTHER PTHR13734:SF45 522 748 1.9E-74 T 19-04-2016 APA12_RS08475 ff9678df1a475c43a01f9678c685f6b5 996 PANTHER PTHR13734:SF45 164 486 1.9E-74 T 19-04-2016 APA12_RS08475 ff9678df1a475c43a01f9678c685f6b5 996 Gene3D G3DSA:3.30.460.10 131 221 7.5E-8 T 19-04-2016 APA12_RS08475 ff9678df1a475c43a01f9678c685f6b5 996 Pfam PF01909 Nucleotidyltransferase domain 130 191 2.1E-4 T 19-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 APA12_RS08475 ff9678df1a475c43a01f9678c685f6b5 996 SUPERFAMILY SSF81301 40 225 9.81E-27 T 19-04-2016 APA12_RS08475 ff9678df1a475c43a01f9678c685f6b5 996 SUPERFAMILY SSF109604 521 646 8.79E-14 T 19-04-2016 APA12_RS08475 ff9678df1a475c43a01f9678c685f6b5 996 Pfam PF08335 GlnD PII-uridylyltransferase 237 379 3.5E-34 T 19-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 APA12_RS08475 ff9678df1a475c43a01f9678c685f6b5 996 SMART SM00471 551 698 0.0033 T 19-04-2016 IPR003607 HD/PDEase domain APA12_RS08475 ff9678df1a475c43a01f9678c685f6b5 996 PANTHER PTHR13734 522 748 1.9E-74 T 19-04-2016 APA12_RS08475 ff9678df1a475c43a01f9678c685f6b5 996 PANTHER PTHR13734 164 486 1.9E-74 T 19-04-2016 APA12_RS08475 ff9678df1a475c43a01f9678c685f6b5 996 SUPERFAMILY SSF55021 793 861 2.92E-10 T 19-04-2016 APA12_RS08475 ff9678df1a475c43a01f9678c685f6b5 996 PIRSF PIRSF006288 51 987 0.0 T 19-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 APA12_RS08475 ff9678df1a475c43a01f9678c685f6b5 996 Gene3D G3DSA:3.30.70.260 797 856 5.0E-7 T 19-04-2016 APA12_RS08475 ff9678df1a475c43a01f9678c685f6b5 996 Gene3D G3DSA:3.30.70.260 906 976 2.8E-14 T 19-04-2016 APA12_RS00535 880c628c95cc0171b9aeed25b1db2d37 465 PANTHER PTHR22912:SF106 138 457 4.7E-193 T 19-04-2016 APA12_RS00535 880c628c95cc0171b9aeed25b1db2d37 465 PANTHER PTHR22912:SF106 1 119 4.7E-193 T 19-04-2016 APA12_RS00535 880c628c95cc0171b9aeed25b1db2d37 465 PANTHER PTHR22912 138 457 4.7E-193 T 19-04-2016 APA12_RS00535 880c628c95cc0171b9aeed25b1db2d37 465 PANTHER PTHR22912 1 119 4.7E-193 T 19-04-2016 APA12_RS00535 880c628c95cc0171b9aeed25b1db2d37 465 SUPERFAMILY SSF51905 1 61 1.44E-55 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS00535 880c628c95cc0171b9aeed25b1db2d37 465 SUPERFAMILY SSF51905 88 334 1.44E-55 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS00535 880c628c95cc0171b9aeed25b1db2d37 465 Gene3D G3DSA:3.50.50.60 2 147 2.8E-44 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS00535 880c628c95cc0171b9aeed25b1db2d37 465 PIRSF PIRSF000350 1 455 1.2E-85 T 19-04-2016 APA12_RS00535 880c628c95cc0171b9aeed25b1db2d37 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 140 158 1.8E-31 T 19-04-2016 APA12_RS00535 880c628c95cc0171b9aeed25b1db2d37 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.8E-31 T 19-04-2016 APA12_RS00535 880c628c95cc0171b9aeed25b1db2d37 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 277 1.8E-31 T 19-04-2016 APA12_RS00535 880c628c95cc0171b9aeed25b1db2d37 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 1.8E-31 T 19-04-2016 APA12_RS00535 880c628c95cc0171b9aeed25b1db2d37 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 1.8E-31 T 19-04-2016 APA12_RS00535 880c628c95cc0171b9aeed25b1db2d37 465 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 453 1.1E-31 T 19-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APA12_RS00535 880c628c95cc0171b9aeed25b1db2d37 465 Gene3D G3DSA:3.30.390.30 347 460 5.8E-39 T 19-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APA12_RS00535 880c628c95cc0171b9aeed25b1db2d37 465 Gene3D G3DSA:3.50.50.60 148 334 6.6E-54 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS00535 880c628c95cc0171b9aeed25b1db2d37 465 SUPERFAMILY SSF55424 343 457 2.92E-31 T 19-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 APA12_RS00535 880c628c95cc0171b9aeed25b1db2d37 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 152 2.1E-65 T 19-04-2016 APA12_RS00535 880c628c95cc0171b9aeed25b1db2d37 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 2.1E-65 T 19-04-2016 APA12_RS00535 880c628c95cc0171b9aeed25b1db2d37 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 2.1E-65 T 19-04-2016 APA12_RS00535 880c628c95cc0171b9aeed25b1db2d37 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 406 421 2.1E-65 T 19-04-2016 APA12_RS00535 880c628c95cc0171b9aeed25b1db2d37 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 2.1E-65 T 19-04-2016 APA12_RS00535 880c628c95cc0171b9aeed25b1db2d37 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 2.1E-65 T 19-04-2016 APA12_RS00535 880c628c95cc0171b9aeed25b1db2d37 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 276 2.1E-65 T 19-04-2016 APA12_RS00535 880c628c95cc0171b9aeed25b1db2d37 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 2.1E-65 T 19-04-2016 APA12_RS00535 880c628c95cc0171b9aeed25b1db2d37 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 428 448 2.1E-65 T 19-04-2016 APA12_RS00535 880c628c95cc0171b9aeed25b1db2d37 465 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 325 7.7E-67 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS00535 880c628c95cc0171b9aeed25b1db2d37 465 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 19-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 APA12_RS02545 9a5dbe357c877196b244ed8c7ed89a94 283 SUPERFAMILY SSF47413 3 66 1.45E-10 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APA12_RS02545 9a5dbe357c877196b244ed8c7ed89a94 283 SMART SM00530 9 65 3.5E-9 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APA12_RS02545 9a5dbe357c877196b244ed8c7ed89a94 283 SUPERFAMILY SSF51306 189 282 1.29E-11 T 19-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C APA12_RS02545 9a5dbe357c877196b244ed8c7ed89a94 283 Pfam PF01381 Helix-turn-helix 12 65 1.8E-10 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APA12_RS02545 9a5dbe357c877196b244ed8c7ed89a94 283 Gene3D G3DSA:2.10.109.10 175 281 1.0E-9 T 19-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain APA12_RS02545 9a5dbe357c877196b244ed8c7ed89a94 283 Gene3D G3DSA:1.10.260.40 7 67 2.8E-13 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APA12_RS05755 3299bee9172e75e4d5f61263092bad42 354 Pfam PF02222 ATP-grasp domain 95 160 6.3E-6 T 19-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 APA12_RS05755 3299bee9172e75e4d5f61263092bad42 354 SUPERFAMILY SSF56059 231 288 4.27E-12 T 19-04-2016 APA12_RS05755 3299bee9172e75e4d5f61263092bad42 354 SUPERFAMILY SSF56059 96 185 4.27E-12 T 19-04-2016 APA12_RS05755 3299bee9172e75e4d5f61263092bad42 354 Gene3D G3DSA:3.30.1490.20 76 132 3.1E-8 T 19-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APA12_RS13895 8cba34c69e6ec54a0fa3c7be35d014eb 207 Gene3D G3DSA:3.65.10.10 35 203 7.4E-46 T 19-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APA12_RS13895 8cba34c69e6ec54a0fa3c7be35d014eb 207 PANTHER PTHR21090 16 204 1.2E-69 T 19-04-2016 APA12_RS13895 8cba34c69e6ec54a0fa3c7be35d014eb 207 ProSitePatterns PS00104 EPSP synthase signature 1. 102 116 - T 19-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 APA12_RS13895 8cba34c69e6ec54a0fa3c7be35d014eb 207 SUPERFAMILY SSF55205 21 203 4.91E-52 T 19-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 APA12_RS13895 8cba34c69e6ec54a0fa3c7be35d014eb 207 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 21 204 2.4E-50 T 19-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APA12_RS13895 8cba34c69e6ec54a0fa3c7be35d014eb 207 PANTHER PTHR21090:SF5 16 204 1.2E-69 T 19-04-2016 APA12_RS03985 6c0313876e03c66ffe1b5504e54f552c 251 Pfam PF00994 Probable molybdopterin binding domain 7 164 4.8E-29 T 19-04-2016 IPR001453 MoaB/Mog domain APA12_RS03985 6c0313876e03c66ffe1b5504e54f552c 251 SMART SM00852 6 166 9.0E-28 T 19-04-2016 IPR001453 MoaB/Mog domain APA12_RS03985 6c0313876e03c66ffe1b5504e54f552c 251 SUPERFAMILY SSF53218 5 197 1.14E-36 T 19-04-2016 IPR001453 MoaB/Mog domain APA12_RS03985 6c0313876e03c66ffe1b5504e54f552c 251 Gene3D G3DSA:3.40.980.10 4 202 2.1E-32 T 19-04-2016 IPR001453 MoaB/Mog domain APA12_RS03985 6c0313876e03c66ffe1b5504e54f552c 251 PANTHER PTHR23293:SF5 1 165 1.1E-47 T 19-04-2016 APA12_RS03985 6c0313876e03c66ffe1b5504e54f552c 251 PANTHER PTHR23293 1 165 1.1E-47 T 19-04-2016 APA12_RS13435 d57deb4d2505f94b95a0265296a54f4a 441 Gene3D G3DSA:3.20.20.70 202 440 8.9E-86 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS13435 d57deb4d2505f94b95a0265296a54f4a 441 Pfam PF00583 Acetyltransferase (GNAT) family 66 146 1.1E-11 T 19-04-2016 IPR000182 GNAT domain GO:0008080 APA12_RS13435 d57deb4d2505f94b95a0265296a54f4a 441 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 201 439 35.829 T 19-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 APA12_RS13435 d57deb4d2505f94b95a0265296a54f4a 441 SUPERFAMILY SSF55729 12 170 1.11E-25 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase APA12_RS13435 d57deb4d2505f94b95a0265296a54f4a 441 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 202 435 4.7E-80 T 19-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 APA12_RS13435 d57deb4d2505f94b95a0265296a54f4a 441 PANTHER PTHR21235:SF15 126 439 4.4E-105 T 19-04-2016 APA12_RS13435 d57deb4d2505f94b95a0265296a54f4a 441 SUPERFAMILY SSF51366 202 439 6.83E-75 T 19-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APA12_RS13435 d57deb4d2505f94b95a0265296a54f4a 441 Pfam PF00977 Histidine biosynthesis protein 202 432 9.5E-79 T 19-04-2016 IPR006062 Histidine biosynthesis GO:0000105 APA12_RS13435 d57deb4d2505f94b95a0265296a54f4a 441 Gene3D G3DSA:3.40.630.30 12 173 8.1E-25 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase APA12_RS13435 d57deb4d2505f94b95a0265296a54f4a 441 PANTHER PTHR21235 126 439 4.4E-105 T 19-04-2016 APA12_RS05035 42665f1afdfdb4f024f9ea44fa1198fd 276 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 49 77 - T 19-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 APA12_RS05035 42665f1afdfdb4f024f9ea44fa1198fd 276 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 18 268 7.7E-70 T 19-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 APA12_RS05035 42665f1afdfdb4f024f9ea44fa1198fd 276 SMART SM00650 33 205 7.9E-57 T 19-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 APA12_RS05035 42665f1afdfdb4f024f9ea44fa1198fd 276 PANTHER PTHR11727 4 269 1.0E-90 T 19-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm APA12_RS05035 42665f1afdfdb4f024f9ea44fa1198fd 276 Gene3D G3DSA:3.40.50.150 5 205 2.5E-65 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS05035 42665f1afdfdb4f024f9ea44fa1198fd 276 Gene3D G3DSA:1.10.8.100 210 269 4.3E-20 T 19-04-2016 IPR023165 rRNA adenine dimethylase-like APA12_RS05035 42665f1afdfdb4f024f9ea44fa1198fd 276 SUPERFAMILY SSF53335 13 270 5.02E-68 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS05035 42665f1afdfdb4f024f9ea44fa1198fd 276 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 17 271 48.887 T 19-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 APA12_RS05035 42665f1afdfdb4f024f9ea44fa1198fd 276 Pfam PF00398 Ribosomal RNA adenine dimethylase 18 263 2.1E-42 T 19-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm APA12_RS04555 06bbc6641011b6bb5302c4d160f86849 111 Pfam PF04273 Putative phosphatase (DUF442) 3 110 1.6E-35 T 19-04-2016 IPR005939 Beta-lactamase hydrolase-like GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- APA12_RS04555 06bbc6641011b6bb5302c4d160f86849 111 Gene3D G3DSA:3.90.190.10 1 109 6.6E-38 T 19-04-2016 IPR029021 Protein-tyrosine phosphatase-like APA12_RS04555 06bbc6641011b6bb5302c4d160f86849 111 TIGRFAM TIGR01244 TIGR01244: TIGR01244 family protein 5 108 1.4E-29 T 19-04-2016 IPR005939 Beta-lactamase hydrolase-like GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- APA12_RS04555 06bbc6641011b6bb5302c4d160f86849 111 SUPERFAMILY SSF52799 4 102 3.59E-7 T 19-04-2016 IPR029021 Protein-tyrosine phosphatase-like APA12_RS01210 ae188e37e4f031de53af84bed87828da 748 Pfam PF00271 Helicase conserved C-terminal domain 477 584 1.7E-19 T 19-04-2016 IPR001650 Helicase, C-terminal APA12_RS01210 ae188e37e4f031de53af84bed87828da 748 SMART SM00490 499 585 9.2E-20 T 19-04-2016 IPR001650 Helicase, C-terminal APA12_RS01210 ae188e37e4f031de53af84bed87828da 748 PANTHER PTHR24029 38 721 0.0 T 19-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 APA12_RS01210 ae188e37e4f031de53af84bed87828da 748 Gene3D G3DSA:3.40.50.300 458 618 3.6E-39 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS01210 ae188e37e4f031de53af84bed87828da 748 SUPERFAMILY SSF52540 72 121 8.11E-36 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS01210 ae188e37e4f031de53af84bed87828da 748 SUPERFAMILY SSF52540 498 618 8.11E-36 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS01210 ae188e37e4f031de53af84bed87828da 748 Gene3D G3DSA:3.40.50.300 295 377 1.4E-15 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS01210 ae188e37e4f031de53af84bed87828da 748 Gene3D G3DSA:3.40.50.300 427 448 1.4E-15 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS01210 ae188e37e4f031de53af84bed87828da 748 Gene3D G3DSA:3.40.50.300 46 197 3.4E-40 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS01210 ae188e37e4f031de53af84bed87828da 748 Pfam PF12344 Ultra-violet resistance protein B 591 632 1.4E-20 T 19-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain APA12_RS01210 ae188e37e4f031de53af84bed87828da 748 SMART SM00487 48 464 1.8E-30 T 19-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APA12_RS01210 ae188e37e4f031de53af84bed87828da 748 Pfam PF02151 UvrB/uvrC motif 667 698 3.5E-7 T 19-04-2016 IPR001943 UVR domain GO:0005515 APA12_RS01210 ae188e37e4f031de53af84bed87828da 748 Gene3D G3DSA:4.10.860.10 654 701 1.7E-15 T 19-04-2016 IPR001943 UVR domain GO:0005515 APA12_RS01210 ae188e37e4f031de53af84bed87828da 748 SUPERFAMILY SSF52540 43 452 9.19E-133 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS01210 ae188e37e4f031de53af84bed87828da 748 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 45 696 0.0 T 19-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 APA12_RS01210 ae188e37e4f031de53af84bed87828da 748 Gene3D G3DSA:3.30.2060.10 198 277 1.1E-13 T 19-04-2016 APA12_RS01210 ae188e37e4f031de53af84bed87828da 748 SUPERFAMILY SSF46600 655 701 6.41E-11 T 19-04-2016 IPR001943 UVR domain GO:0005515 APA12_RS01210 ae188e37e4f031de53af84bed87828da 748 Hamap MF_00204 UvrABC system protein B [uvrB]. 42 699 41.539 T 19-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 APA12_RS01210 ae188e37e4f031de53af84bed87828da 748 Pfam PF04851 Type III restriction enzyme, res subunit 52 178 4.8E-11 T 19-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 APA12_RS06890 c5b124668be47e9e4bcd659de3415b0d 121 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 113 3.0E-14 T 19-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS06890 c5b124668be47e9e4bcd659de3415b0d 121 SUPERFAMILY SSF88659 61 117 5.42E-10 T 19-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS06890 c5b124668be47e9e4bcd659de3415b0d 121 Pfam PF08281 Sigma-70, region 4 74 108 1.5E-7 T 19-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS06890 c5b124668be47e9e4bcd659de3415b0d 121 Gene3D G3DSA:1.10.10.10 68 109 8.5E-9 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS00310 140f40e294cad27465aa8b3b122d1d12 400 Pfam PF03022 Major royal jelly protein 118 334 4.2E-23 T 19-04-2016 IPR017996 Major royal jelly protein/Protein yellow APA12_RS00310 140f40e294cad27465aa8b3b122d1d12 400 Gene3D G3DSA:2.120.10.30 41 392 1.0E-98 T 19-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APA12_RS00310 140f40e294cad27465aa8b3b122d1d12 400 SUPERFAMILY SSF63829 56 217 4.71E-21 T 19-04-2016 APA12_RS00310 140f40e294cad27465aa8b3b122d1d12 400 SUPERFAMILY SSF63829 248 364 4.71E-21 T 19-04-2016 APA12_RS00310 140f40e294cad27465aa8b3b122d1d12 400 PANTHER PTHR10009 89 387 1.6E-32 T 19-04-2016 IPR017996 Major royal jelly protein/Protein yellow APA12_RS12415 fba1030624f88d0191862cd3bce57232 1028 Pfam PF13641 Glycosyltransferase like family 2 371 594 5.5E-14 T 19-04-2016 APA12_RS12415 fba1030624f88d0191862cd3bce57232 1028 SUPERFAMILY SSF53448 370 591 3.09E-31 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS12415 fba1030624f88d0191862cd3bce57232 1028 SUPERFAMILY SSF48452 34 128 3.04E-5 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS12415 fba1030624f88d0191862cd3bce57232 1028 SUPERFAMILY SSF53756 655 1008 2.95E-23 T 19-04-2016 APA12_RS12415 fba1030624f88d0191862cd3bce57232 1028 Pfam PF00534 Glycosyl transferases group 1 878 1012 2.1E-9 T 19-04-2016 IPR001296 Glycosyl transferase, family 1 APA12_RS12415 fba1030624f88d0191862cd3bce57232 1028 Gene3D G3DSA:3.90.550.10 372 607 5.9E-22 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS12415 fba1030624f88d0191862cd3bce57232 1028 Gene3D G3DSA:3.40.50.2000 843 991 7.4E-6 T 19-04-2016 APA12_RS12415 fba1030624f88d0191862cd3bce57232 1028 Gene3D G3DSA:1.25.40.10 33 120 9.6E-7 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS12415 fba1030624f88d0191862cd3bce57232 1028 PANTHER PTHR22916:SF26 372 586 2.6E-22 T 19-04-2016 APA12_RS12415 fba1030624f88d0191862cd3bce57232 1028 PANTHER PTHR22916 372 586 2.6E-22 T 19-04-2016 APA12_RS06720 f9e7e3be911423625660cc3709257deb 215 Pfam PF02586 SOS response associated peptidase (SRAP) 1 202 2.8E-24 T 19-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APA12_RS06720 f9e7e3be911423625660cc3709257deb 215 PANTHER PTHR13604 2 208 3.7E-46 T 19-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APA12_RS06720 f9e7e3be911423625660cc3709257deb 215 Gene3D G3DSA:3.90.1680.10 1 207 1.9E-28 T 19-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APA12_RS06720 f9e7e3be911423625660cc3709257deb 215 PANTHER PTHR13604:SF1 2 208 3.7E-46 T 19-04-2016 APA12_RS06720 f9e7e3be911423625660cc3709257deb 215 SUPERFAMILY SSF143081 2 209 2.88E-61 T 19-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APA12_RS07460 742fc085630dc752b310b12592599fde 224 Gene3D G3DSA:1.10.357.10 43 202 7.8E-18 T 19-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APA12_RS07460 742fc085630dc752b310b12592599fde 224 SUPERFAMILY SSF46689 28 108 3.39E-14 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS07460 742fc085630dc752b310b12592599fde 224 Pfam PF00440 Bacterial regulatory proteins, tetR family 42 84 2.4E-11 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APA12_RS07750 3cc7e068fda5bc4176ee59927b12d101 270 SUPERFAMILY SSF50182 109 173 5.56E-16 T 19-04-2016 IPR010920 LSM domain APA12_RS07750 3cc7e068fda5bc4176ee59927b12d101 270 Pfam PF00924 Mechanosensitive ion channel 74 220 1.0E-31 T 19-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 APA12_RS07750 3cc7e068fda5bc4176ee59927b12d101 270 SUPERFAMILY SSF82689 183 259 1.31E-5 T 19-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 APA12_RS07750 3cc7e068fda5bc4176ee59927b12d101 270 PANTHER PTHR30221:SF7 11 220 2.0E-50 T 19-04-2016 APA12_RS07750 3cc7e068fda5bc4176ee59927b12d101 270 Gene3D G3DSA:3.30.70.100 186 249 5.5E-5 T 19-04-2016 APA12_RS07750 3cc7e068fda5bc4176ee59927b12d101 270 SUPERFAMILY SSF82861 23 107 2.88E-15 T 19-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 APA12_RS07750 3cc7e068fda5bc4176ee59927b12d101 270 Gene3D G3DSA:2.30.30.60 124 172 5.4E-15 T 19-04-2016 APA12_RS07750 3cc7e068fda5bc4176ee59927b12d101 270 Pfam PF05552 Conserved TM helix 12 59 1.5E-13 T 19-04-2016 IPR008910 Conserved TM helix APA12_RS07750 3cc7e068fda5bc4176ee59927b12d101 270 PANTHER PTHR30221 11 220 2.0E-50 T 19-04-2016 APA12_RS01195 2c3801c7336fe5dc6a15c88d0e84f431 153 SUPERFAMILY SSF55811 7 128 8.26E-30 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APA12_RS01195 2c3801c7336fe5dc6a15c88d0e84f431 153 PRINTS PR00502 NUDIX hydrolase family signature 38 52 9.5E-6 T 19-04-2016 IPR020476 NUDIX hydrolase APA12_RS01195 2c3801c7336fe5dc6a15c88d0e84f431 153 PRINTS PR00502 NUDIX hydrolase family signature 52 67 9.5E-6 T 19-04-2016 IPR020476 NUDIX hydrolase APA12_RS01195 2c3801c7336fe5dc6a15c88d0e84f431 153 PANTHER PTHR22769 10 125 2.4E-25 T 19-04-2016 APA12_RS01195 2c3801c7336fe5dc6a15c88d0e84f431 153 Gene3D G3DSA:3.90.79.10 10 130 1.5E-29 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APA12_RS01195 2c3801c7336fe5dc6a15c88d0e84f431 153 Pfam PF00293 NUDIX domain 11 134 1.3E-22 T 19-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APA12_RS01825 f8c27f6ab6c9ed2642f7a5222dc69161 420 ProSitePatterns PS00217 Sugar transport proteins signature 2. 123 148 - T 19-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APA12_RS01825 f8c27f6ab6c9ed2642f7a5222dc69161 420 SUPERFAMILY SSF103473 25 413 5.23E-65 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS01825 f8c27f6ab6c9ed2642f7a5222dc69161 420 PANTHER PTHR23508:SF10 25 408 2.5E-113 T 19-04-2016 APA12_RS01825 f8c27f6ab6c9ed2642f7a5222dc69161 420 PANTHER PTHR23508 25 408 2.5E-113 T 19-04-2016 APA12_RS01825 f8c27f6ab6c9ed2642f7a5222dc69161 420 Pfam PF07690 Major Facilitator Superfamily 260 408 2.2E-8 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APA12_RS01825 f8c27f6ab6c9ed2642f7a5222dc69161 420 Pfam PF07690 Major Facilitator Superfamily 32 245 1.6E-24 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APA12_RS01825 f8c27f6ab6c9ed2642f7a5222dc69161 420 Gene3D G3DSA:1.20.1250.20 236 410 2.5E-17 T 19-04-2016 APA12_RS01825 f8c27f6ab6c9ed2642f7a5222dc69161 420 Gene3D G3DSA:1.20.1250.20 27 210 4.7E-33 T 19-04-2016 APA12_RS11210 7c7ed74c50f7d5217f0d63b4578fc504 495 SUPERFAMILY SSF53720 10 494 5.24E-155 T 19-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APA12_RS11210 7c7ed74c50f7d5217f0d63b4578fc504 495 PANTHER PTHR11699:SF46 1 495 9.2E-207 T 19-04-2016 APA12_RS11210 7c7ed74c50f7d5217f0d63b4578fc504 495 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 295 306 - T 19-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 APA12_RS11210 7c7ed74c50f7d5217f0d63b4578fc504 495 PANTHER PTHR11699 1 495 9.2E-207 T 19-04-2016 APA12_RS11210 7c7ed74c50f7d5217f0d63b4578fc504 495 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 267 274 - T 19-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 APA12_RS11210 7c7ed74c50f7d5217f0d63b4578fc504 495 Gene3D G3DSA:3.40.605.10 16 280 5.0E-96 T 19-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APA12_RS11210 7c7ed74c50f7d5217f0d63b4578fc504 495 Pfam PF00171 Aldehyde dehydrogenase family 29 491 2.3E-156 T 19-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APA12_RS11210 7c7ed74c50f7d5217f0d63b4578fc504 495 Gene3D G3DSA:3.40.309.10 281 466 1.1E-63 T 19-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APA12_RS07900 2862a890722ee68e228a698ab055e7d7 461 Pfam PF13701 Transposase DDE domain group 1 13 458 1.0E-164 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS07900 2862a890722ee68e228a698ab055e7d7 461 SUPERFAMILY SSF53098 158 398 1.21E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS08205 2862a890722ee68e228a698ab055e7d7 461 Pfam PF13701 Transposase DDE domain group 1 13 458 1.0E-164 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS08205 2862a890722ee68e228a698ab055e7d7 461 SUPERFAMILY SSF53098 158 398 1.21E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS12095 2862a890722ee68e228a698ab055e7d7 461 Pfam PF13701 Transposase DDE domain group 1 13 458 1.0E-164 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS12095 2862a890722ee68e228a698ab055e7d7 461 SUPERFAMILY SSF53098 158 398 1.21E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS06965 2862a890722ee68e228a698ab055e7d7 461 Pfam PF13701 Transposase DDE domain group 1 13 458 1.0E-164 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS06965 2862a890722ee68e228a698ab055e7d7 461 SUPERFAMILY SSF53098 158 398 1.21E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS12150 2862a890722ee68e228a698ab055e7d7 461 Pfam PF13701 Transposase DDE domain group 1 13 458 1.0E-164 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS12150 2862a890722ee68e228a698ab055e7d7 461 SUPERFAMILY SSF53098 158 398 1.21E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS12000 2862a890722ee68e228a698ab055e7d7 461 Pfam PF13701 Transposase DDE domain group 1 13 458 1.0E-164 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS12000 2862a890722ee68e228a698ab055e7d7 461 SUPERFAMILY SSF53098 158 398 1.21E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS12225 2862a890722ee68e228a698ab055e7d7 461 Pfam PF13701 Transposase DDE domain group 1 13 458 1.0E-164 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS12225 2862a890722ee68e228a698ab055e7d7 461 SUPERFAMILY SSF53098 158 398 1.21E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS10540 b08d4b2d1fd324cd13b81b8c9e262233 465 Gene3D G3DSA:3.30.470.20 210 450 3.3E-89 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APA12_RS10540 b08d4b2d1fd324cd13b81b8c9e262233 465 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 159 173 - T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APA12_RS10540 b08d4b2d1fd324cd13b81b8c9e262233 465 PANTHER PTHR18866 6 450 2.5E-262 T 19-04-2016 APA12_RS10540 b08d4b2d1fd324cd13b81b8c9e262233 465 Gene3D G3DSA:3.40.50.20 8 134 1.1E-50 T 19-04-2016 IPR016185 Pre-ATP-grasp domain APA12_RS10540 b08d4b2d1fd324cd13b81b8c9e262233 465 SUPERFAMILY SSF51246 336 449 9.94E-39 T 19-04-2016 IPR011054 Rudiment single hybrid motif APA12_RS10540 b08d4b2d1fd324cd13b81b8c9e262233 465 Pfam PF00289 Biotin carboxylase, N-terminal domain 7 115 3.7E-44 T 19-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain APA12_RS10540 b08d4b2d1fd324cd13b81b8c9e262233 465 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 8 450 2.3E-196 T 19-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 APA12_RS10540 b08d4b2d1fd324cd13b81b8c9e262233 465 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 291 298 - T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APA12_RS10540 b08d4b2d1fd324cd13b81b8c9e262233 465 Pfam PF02785 Biotin carboxylase C-terminal domain 341 446 4.8E-36 T 19-04-2016 IPR005482 Biotin carboxylase, C-terminal APA12_RS10540 b08d4b2d1fd324cd13b81b8c9e262233 465 SUPERFAMILY SSF56059 88 351 1.38E-63 T 19-04-2016 APA12_RS10540 b08d4b2d1fd324cd13b81b8c9e262233 465 SUPERFAMILY SSF52440 6 118 5.9E-47 T 19-04-2016 IPR016185 Pre-ATP-grasp domain APA12_RS10540 b08d4b2d1fd324cd13b81b8c9e262233 465 Gene3D G3DSA:3.30.1490.20 135 208 8.7E-27 T 19-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APA12_RS10540 b08d4b2d1fd324cd13b81b8c9e262233 465 SMART SM00878 341 446 1.1E-55 T 19-04-2016 IPR005482 Biotin carboxylase, C-terminal APA12_RS10540 b08d4b2d1fd324cd13b81b8c9e262233 465 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 120 327 3.5E-72 T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APA12_RS09975 2e07f62cf2979fdc014dfa33b7c40975 225 Gene3D G3DSA:1.10.10.10 125 224 2.0E-35 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS09975 2e07f62cf2979fdc014dfa33b7c40975 225 SMART SM00448 1 113 1.7E-37 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS09975 2e07f62cf2979fdc014dfa33b7c40975 225 SUPERFAMILY SSF52172 1 180 1.43E-35 T 19-04-2016 IPR011006 CheY-like superfamily APA12_RS09975 2e07f62cf2979fdc014dfa33b7c40975 225 PANTHER PTHR26402 1 225 7.2E-98 T 19-04-2016 APA12_RS09975 2e07f62cf2979fdc014dfa33b7c40975 225 SMART SM00862 148 223 1.4E-29 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APA12_RS09975 2e07f62cf2979fdc014dfa33b7c40975 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 223 5.4E-28 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APA12_RS09975 2e07f62cf2979fdc014dfa33b7c40975 225 Gene3D G3DSA:3.40.50.2300 1 124 1.7E-37 T 19-04-2016 APA12_RS09975 2e07f62cf2979fdc014dfa33b7c40975 225 PANTHER PTHR26402:SF578 1 225 7.2E-98 T 19-04-2016 APA12_RS09975 2e07f62cf2979fdc014dfa33b7c40975 225 Pfam PF00072 Response regulator receiver domain 3 113 1.5E-25 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS08470 3c7816a7531bcde9444657c977931766 290 Pfam PF00293 NUDIX domain 128 232 1.5E-7 T 19-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APA12_RS08470 3c7816a7531bcde9444657c977931766 290 SUPERFAMILY SSF55811 99 257 1.96E-17 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APA12_RS08470 3c7816a7531bcde9444657c977931766 290 Gene3D G3DSA:3.90.79.10 82 258 2.5E-45 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APA12_RS08470 3c7816a7531bcde9444657c977931766 290 PANTHER PTHR13622 83 279 1.4E-50 T 19-04-2016 APA12_RS08470 3c7816a7531bcde9444657c977931766 290 PANTHER PTHR13622:SF8 83 279 1.4E-50 T 19-04-2016 APA12_RS11710 d5b426add9b7dfcb56cb9dc1cdca70db 353 SUPERFAMILY SSF143865 48 284 6.41E-23 T 19-04-2016 APA12_RS11710 d5b426add9b7dfcb56cb9dc1cdca70db 353 Pfam PF01544 CorA-like Mg2+ transporter protein 62 348 6.2E-53 T 19-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 APA12_RS11710 d5b426add9b7dfcb56cb9dc1cdca70db 353 PANTHER PTHR21535 66 353 4.8E-19 T 19-04-2016 APA12_RS11710 d5b426add9b7dfcb56cb9dc1cdca70db 353 SUPERFAMILY SSF144083 288 349 6.15E-11 T 19-04-2016 APA12_RS11710 d5b426add9b7dfcb56cb9dc1cdca70db 353 Gene3D G3DSA:1.20.58.340 277 351 1.8E-13 T 19-04-2016 APA12_RS01645 75e6f38ac4a99aea373e69ccc280f51e 718 SMART SM00382 518 702 1.8E-19 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS01645 75e6f38ac4a99aea373e69ccc280f51e 718 Gene3D G3DSA:3.40.50.300 493 709 5.0E-62 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS01645 75e6f38ac4a99aea373e69ccc280f51e 718 Pfam PF00664 ABC transporter transmembrane region 173 437 1.6E-29 T 19-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APA12_RS01645 75e6f38ac4a99aea373e69ccc280f51e 718 SUPERFAMILY SSF52540 489 705 7.35E-65 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS01645 75e6f38ac4a99aea373e69ccc280f51e 718 Pfam PF03412 Peptidase C39 family 16 144 2.0E-38 T 19-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 APA12_RS01645 75e6f38ac4a99aea373e69ccc280f51e 718 SUPERFAMILY SSF90123 151 461 6.54E-53 T 19-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APA12_RS01645 75e6f38ac4a99aea373e69ccc280f51e 718 ProSitePatterns PS00211 ABC transporters family signature. 630 644 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APA12_RS01645 75e6f38ac4a99aea373e69ccc280f51e 718 PANTHER PTHR24221 157 699 8.0E-115 T 19-04-2016 APA12_RS01645 75e6f38ac4a99aea373e69ccc280f51e 718 Gene3D G3DSA:3.90.70.10 23 143 4.7E-28 T 19-04-2016 APA12_RS01645 75e6f38ac4a99aea373e69ccc280f51e 718 Pfam PF00005 ABC transporter 510 658 2.6E-32 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS01645 75e6f38ac4a99aea373e69ccc280f51e 718 Gene3D G3DSA:1.20.1560.10 159 465 1.8E-56 T 19-04-2016 APA12_RS10625 9350e59bf4a28748c848f49025a2e95f 260 Pfam PF02630 SCO1/SenC 90 227 6.6E-38 T 19-04-2016 IPR003782 Copper chaperone SCO1/SenC APA12_RS10625 9350e59bf4a28748c848f49025a2e95f 260 Gene3D G3DSA:3.40.30.10 75 252 1.8E-51 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS10625 9350e59bf4a28748c848f49025a2e95f 260 SUPERFAMILY SSF52833 96 252 1.4E-42 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS10625 9350e59bf4a28748c848f49025a2e95f 260 PANTHER PTHR12151 96 252 7.7E-54 T 19-04-2016 IPR003782 Copper chaperone SCO1/SenC APA12_RS06585 1b6900bbac8862a26c92320fc3dcde07 911 SUPERFAMILY SSF52540 270 492 8.61E-63 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS06585 1b6900bbac8862a26c92320fc3dcde07 911 Pfam PF12698 ABC-2 family transporter protein 562 898 3.5E-37 T 19-04-2016 APA12_RS06585 1b6900bbac8862a26c92320fc3dcde07 911 PANTHER PTHR24220:SF388 9 391 4.1E-184 T 19-04-2016 APA12_RS06585 1b6900bbac8862a26c92320fc3dcde07 911 PANTHER PTHR24220 9 391 4.1E-184 T 19-04-2016 APA12_RS06585 1b6900bbac8862a26c92320fc3dcde07 911 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APA12_RS06585 1b6900bbac8862a26c92320fc3dcde07 911 SUPERFAMILY SSF52540 8 234 2.01E-58 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS06585 1b6900bbac8862a26c92320fc3dcde07 911 Pfam PF00005 ABC transporter 23 170 8.2E-29 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS06585 1b6900bbac8862a26c92320fc3dcde07 911 Pfam PF00005 ABC transporter 288 431 5.2E-29 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS06585 1b6900bbac8862a26c92320fc3dcde07 911 SMART SM00382 296 479 1.0E-9 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS06585 1b6900bbac8862a26c92320fc3dcde07 911 SMART SM00382 32 240 5.1E-5 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS06585 1b6900bbac8862a26c92320fc3dcde07 911 Gene3D G3DSA:3.40.50.300 6 236 1.4E-62 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS06585 1b6900bbac8862a26c92320fc3dcde07 911 Gene3D G3DSA:3.40.50.300 265 495 6.1E-71 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS13340 d0dd07680e43aa8bc3700d6135525ac8 844 PANTHER PTHR30460:SF0 377 815 6.0E-88 T 19-04-2016 APA12_RS13340 d0dd07680e43aa8bc3700d6135525ac8 844 SUPERFAMILY SSF82689 698 790 2.62E-5 T 19-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 APA12_RS13340 d0dd07680e43aa8bc3700d6135525ac8 844 SUPERFAMILY SSF50182 629 686 8.5E-12 T 19-04-2016 IPR010920 LSM domain APA12_RS13340 d0dd07680e43aa8bc3700d6135525ac8 844 SUPERFAMILY SSF82861 548 627 1.06E-10 T 19-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 APA12_RS13340 d0dd07680e43aa8bc3700d6135525ac8 844 PANTHER PTHR30460 377 815 6.0E-88 T 19-04-2016 APA12_RS13340 d0dd07680e43aa8bc3700d6135525ac8 844 Pfam PF00924 Mechanosensitive ion channel 586 785 1.9E-36 T 19-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 APA12_RS13340 d0dd07680e43aa8bc3700d6135525ac8 844 Gene3D G3DSA:2.30.30.60 645 690 3.9E-12 T 19-04-2016 APA12_RS05545 0d3e331f117422b5f7e7c3e7675008e0 158 Pfam PF11911 Protein of unknown function (DUF3429) 5 153 2.6E-29 T 19-04-2016 IPR021836 Protein of unknown function DUF3429 APA12_RS05545 0d3e331f117422b5f7e7c3e7675008e0 158 PANTHER PTHR15887 1 156 5.5E-13 T 19-04-2016 APA12_RS08550 bb7fa2c07a2df25c3520cbe09098e6d9 372 Pfam PF00535 Glycosyl transferase family 2 18 181 5.9E-28 T 19-04-2016 IPR001173 Glycosyltransferase 2-like APA12_RS08550 bb7fa2c07a2df25c3520cbe09098e6d9 372 Gene3D G3DSA:3.90.550.10 14 154 7.9E-24 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS08550 bb7fa2c07a2df25c3520cbe09098e6d9 372 SUPERFAMILY SSF53448 14 226 4.5E-34 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS08550 bb7fa2c07a2df25c3520cbe09098e6d9 372 PANTHER PTHR10859:SF37 1 304 1.2E-60 T 19-04-2016 APA12_RS08550 bb7fa2c07a2df25c3520cbe09098e6d9 372 Pfam PF04138 GtrA-like protein 255 370 1.2E-17 T 19-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 APA12_RS08550 bb7fa2c07a2df25c3520cbe09098e6d9 372 PANTHER PTHR10859 1 304 1.2E-60 T 19-04-2016 APA12_RS09160 da6a761473e5da478fefdba82c6b12fe 352 PANTHER PTHR10366:SF41 2 350 1.2E-149 T 19-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 APA12_RS09160 da6a761473e5da478fefdba82c6b12fe 352 Gene3D G3DSA:3.90.25.10 191 336 4.5E-49 T 19-04-2016 APA12_RS09160 da6a761473e5da478fefdba82c6b12fe 352 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 337 2.8E-135 T 19-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 APA12_RS09160 da6a761473e5da478fefdba82c6b12fe 352 PANTHER PTHR10366 2 350 1.2E-149 T 19-04-2016 APA12_RS09160 da6a761473e5da478fefdba82c6b12fe 352 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 8.1E-86 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS09160 da6a761473e5da478fefdba82c6b12fe 352 Gene3D G3DSA:3.40.50.720 1 190 3.0E-59 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS09160 da6a761473e5da478fefdba82c6b12fe 352 SUPERFAMILY SSF51735 1 339 2.2E-88 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS09285 3a181ce3b0b9cfb9e95049251cb0d788 289 PANTHER PTHR13779:SF28 217 286 1.6E-77 T 19-04-2016 APA12_RS09285 3a181ce3b0b9cfb9e95049251cb0d788 289 PANTHER PTHR13779:SF28 32 194 1.6E-77 T 19-04-2016 APA12_RS09285 3a181ce3b0b9cfb9e95049251cb0d788 289 Gene3D G3DSA:3.40.50.300 66 200 9.0E-11 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS09285 3a181ce3b0b9cfb9e95049251cb0d788 289 Pfam PF05673 Protein of unknown function (DUF815) 32 285 8.3E-98 T 19-04-2016 IPR008533 Domain of unknown function DUF815 APA12_RS09285 3a181ce3b0b9cfb9e95049251cb0d788 289 PANTHER PTHR13779 217 286 1.6E-77 T 19-04-2016 APA12_RS09285 3a181ce3b0b9cfb9e95049251cb0d788 289 PANTHER PTHR13779 32 194 1.6E-77 T 19-04-2016 APA12_RS09285 3a181ce3b0b9cfb9e95049251cb0d788 289 SUPERFAMILY SSF52540 41 205 1.27E-20 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS10015 8ab75504a08f6afe30863871fefa2955 271 Gene3D G3DSA:2.60.200.30 126 237 1.1E-26 T 19-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 APA12_RS10015 8ab75504a08f6afe30863871fefa2955 271 PANTHER PTHR20275 23 256 1.5E-94 T 19-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 APA12_RS10015 8ab75504a08f6afe30863871fefa2955 271 Gene3D G3DSA:3.40.50.10330 28 125 1.6E-17 T 19-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 APA12_RS10015 8ab75504a08f6afe30863871fefa2955 271 SUPERFAMILY SSF111331 35 256 2.62E-52 T 19-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain APA12_RS10015 8ab75504a08f6afe30863871fefa2955 271 Pfam PF01513 ATP-NAD kinase 28 218 3.5E-17 T 19-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 APA12_RS10015 8ab75504a08f6afe30863871fefa2955 271 PANTHER PTHR20275:SF7 23 256 1.5E-94 T 19-04-2016 APA12_RS07715 0a5033acfc4ab793f3b0e2b4e9392aac 786 SUPERFAMILY SSF56935 60 786 6.23E-68 T 19-04-2016 APA12_RS07715 0a5033acfc4ab793f3b0e2b4e9392aac 786 Gene3D G3DSA:2.40.170.20 172 786 1.5E-60 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS07715 0a5033acfc4ab793f3b0e2b4e9392aac 786 Pfam PF07715 TonB-dependent Receptor Plug Domain 67 163 2.9E-9 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS07715 0a5033acfc4ab793f3b0e2b4e9392aac 786 Gene3D G3DSA:2.170.130.10 67 163 1.9E-9 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS07715 0a5033acfc4ab793f3b0e2b4e9392aac 786 Pfam PF00593 TonB dependent receptor 508 747 5.2E-17 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS07420 b6106f961c71c4409e06a85d1a838593 360 PANTHER PTHR21716 1 360 1.5E-58 T 19-04-2016 IPR002549 Transmembrane protein TqsA-like APA12_RS07420 b6106f961c71c4409e06a85d1a838593 360 PANTHER PTHR21716:SF20 1 360 1.5E-58 T 19-04-2016 APA12_RS07420 b6106f961c71c4409e06a85d1a838593 360 Pfam PF01594 Domain of unknown function DUF20 23 353 1.3E-37 T 19-04-2016 IPR002549 Transmembrane protein TqsA-like APA12_RS06030 e9e0cf36b96872c7afb73793bc649a70 282 SMART SM00450 153 274 1.1E-9 T 19-04-2016 IPR001763 Rhodanese-like domain APA12_RS06030 e9e0cf36b96872c7afb73793bc649a70 282 SMART SM00450 5 129 1.3E-15 T 19-04-2016 IPR001763 Rhodanese-like domain APA12_RS06030 e9e0cf36b96872c7afb73793bc649a70 282 Pfam PF00581 Rhodanese-like domain 164 269 2.6E-7 T 19-04-2016 IPR001763 Rhodanese-like domain APA12_RS06030 e9e0cf36b96872c7afb73793bc649a70 282 Pfam PF00581 Rhodanese-like domain 7 125 1.7E-12 T 19-04-2016 IPR001763 Rhodanese-like domain APA12_RS06030 e9e0cf36b96872c7afb73793bc649a70 282 SUPERFAMILY SSF52821 2 144 1.96E-35 T 19-04-2016 IPR001763 Rhodanese-like domain APA12_RS06030 e9e0cf36b96872c7afb73793bc649a70 282 Gene3D G3DSA:3.40.250.10 152 277 1.7E-36 T 19-04-2016 IPR001763 Rhodanese-like domain APA12_RS06030 e9e0cf36b96872c7afb73793bc649a70 282 Gene3D G3DSA:3.40.250.10 1 136 1.6E-37 T 19-04-2016 IPR001763 Rhodanese-like domain APA12_RS06030 e9e0cf36b96872c7afb73793bc649a70 282 SUPERFAMILY SSF52821 157 277 2.1E-31 T 19-04-2016 IPR001763 Rhodanese-like domain APA12_RS06030 e9e0cf36b96872c7afb73793bc649a70 282 PANTHER PTHR11364 1 276 2.5E-92 T 19-04-2016 APA12_RS12455 b79fd5d7dc72288b00982d4e6ae5fcac 495 SUPERFAMILY SSF56235 26 275 8.58E-65 T 19-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APA12_RS12455 b79fd5d7dc72288b00982d4e6ae5fcac 495 Gene3D G3DSA:3.40.50.2020 289 456 3.0E-45 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like APA12_RS12455 b79fd5d7dc72288b00982d4e6ae5fcac 495 Pfam PF00156 Phosphoribosyl transferase domain 295 403 6.5E-9 T 19-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APA12_RS12455 b79fd5d7dc72288b00982d4e6ae5fcac 495 PANTHER PTHR11907:SF0 23 493 7.8E-226 T 19-04-2016 APA12_RS12455 b79fd5d7dc72288b00982d4e6ae5fcac 495 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 26 480 4.2E-153 T 19-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 APA12_RS12455 b79fd5d7dc72288b00982d4e6ae5fcac 495 PIRSF PIRSF000485 22 490 8.0E-167 T 19-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 APA12_RS12455 b79fd5d7dc72288b00982d4e6ae5fcac 495 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 25 481 47.529 T 19-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 APA12_RS12455 b79fd5d7dc72288b00982d4e6ae5fcac 495 Pfam PF13537 Glutamine amidotransferase domain 108 228 4.9E-17 T 19-04-2016 IPR017932 Glutamine amidotransferase type 2 domain APA12_RS12455 b79fd5d7dc72288b00982d4e6ae5fcac 495 Gene3D G3DSA:3.60.20.10 26 276 9.9E-63 T 19-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APA12_RS12455 b79fd5d7dc72288b00982d4e6ae5fcac 495 SUPERFAMILY SSF53271 269 486 3.77E-73 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like APA12_RS12455 b79fd5d7dc72288b00982d4e6ae5fcac 495 PANTHER PTHR11907 23 493 7.8E-226 T 19-04-2016 APA12_RS03315 735b07a5760a410661978a11d33e6343 834 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 70 834 22.051 T 19-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 APA12_RS03315 735b07a5760a410661978a11d33e6343 834 Pfam PF07244 Surface antigen variable number repeat 151 227 2.9E-13 T 19-04-2016 IPR010827 Surface antigen variable number GO:0019867 APA12_RS03315 735b07a5760a410661978a11d33e6343 834 Pfam PF07244 Surface antigen variable number repeat 83 138 1.2E-5 T 19-04-2016 IPR010827 Surface antigen variable number GO:0019867 APA12_RS03315 735b07a5760a410661978a11d33e6343 834 Pfam PF07244 Surface antigen variable number repeat 404 475 1.8E-9 T 19-04-2016 IPR010827 Surface antigen variable number GO:0019867 APA12_RS03315 735b07a5760a410661978a11d33e6343 834 Pfam PF07244 Surface antigen variable number repeat 232 318 7.1E-13 T 19-04-2016 IPR010827 Surface antigen variable number GO:0019867 APA12_RS03315 735b07a5760a410661978a11d33e6343 834 Pfam PF07244 Surface antigen variable number repeat 321 400 8.4E-5 T 19-04-2016 IPR010827 Surface antigen variable number GO:0019867 APA12_RS03315 735b07a5760a410661978a11d33e6343 834 PANTHER PTHR12815:SF11 61 769 1.4E-167 T 19-04-2016 APA12_RS03315 735b07a5760a410661978a11d33e6343 834 PANTHER PTHR12815:SF11 789 834 1.4E-167 T 19-04-2016 APA12_RS03315 735b07a5760a410661978a11d33e6343 834 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 84 834 4.5E-213 T 19-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 APA12_RS03315 735b07a5760a410661978a11d33e6343 834 PANTHER PTHR12815 61 769 1.4E-167 T 19-04-2016 APA12_RS03315 735b07a5760a410661978a11d33e6343 834 PANTHER PTHR12815 789 834 1.4E-167 T 19-04-2016 APA12_RS03315 735b07a5760a410661978a11d33e6343 834 Pfam PF01103 Surface antigen 503 834 1.4E-62 T 19-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 APA12_RS03315 735b07a5760a410661978a11d33e6343 834 PIRSF PIRSF006076 27 834 4.6E-230 T 19-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 APA12_RS12975 0f2fb2e3978df93fdd3605dc2cab8d3e 308 Gene3D G3DSA:3.40.50.1220 181 307 6.0E-62 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APA12_RS12975 0f2fb2e3978df93fdd3605dc2cab8d3e 308 SUPERFAMILY SSF52402 3 179 4.77E-45 T 19-04-2016 APA12_RS12975 0f2fb2e3978df93fdd3605dc2cab8d3e 308 SMART SM00893 3 179 2.1E-44 T 19-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 APA12_RS12975 0f2fb2e3978df93fdd3605dc2cab8d3e 308 Pfam PF01012 Electron transfer flavoprotein domain 4 168 1.7E-36 T 19-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 APA12_RS12975 0f2fb2e3978df93fdd3605dc2cab8d3e 308 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 187 269 3.1E-36 T 19-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal APA12_RS12975 0f2fb2e3978df93fdd3605dc2cab8d3e 308 PIRSF PIRSF000089 1 308 5.9E-104 T 19-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 APA12_RS12975 0f2fb2e3978df93fdd3605dc2cab8d3e 308 Gene3D G3DSA:3.40.50.620 1 177 4.8E-52 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS12975 0f2fb2e3978df93fdd3605dc2cab8d3e 308 SUPERFAMILY SSF52467 186 306 3.6E-47 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APA12_RS12975 0f2fb2e3978df93fdd3605dc2cab8d3e 308 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 250 276 - T 19-04-2016 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site APA12_RS12975 0f2fb2e3978df93fdd3605dc2cab8d3e 308 PANTHER PTHR10909 101 305 1.3E-106 T 19-04-2016 APA12_RS12975 0f2fb2e3978df93fdd3605dc2cab8d3e 308 PANTHER PTHR10909:SF294 101 305 1.3E-106 T 19-04-2016 APA12_RS00325 74cccb8383cc5a8780664edb344138d3 357 SUPERFAMILY SSF55781 86 356 4.71E-47 T 19-04-2016 IPR029016 GAF domain-like APA12_RS00325 74cccb8383cc5a8780664edb344138d3 357 Gene3D G3DSA:1.10.10.10 16 97 4.0E-32 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS00325 74cccb8383cc5a8780664edb344138d3 357 PANTHER PTHR34824 4 356 2.6E-91 T 19-04-2016 APA12_RS00325 74cccb8383cc5a8780664edb344138d3 357 SUPERFAMILY SSF46785 16 98 1.06E-18 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS00325 74cccb8383cc5a8780664edb344138d3 357 Gene3D G3DSA:3.30.450.40 190 356 6.6E-25 T 19-04-2016 IPR029016 GAF domain-like APA12_RS00325 74cccb8383cc5a8780664edb344138d3 357 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 15 349 26.546 T 19-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 APA12_RS00325 74cccb8383cc5a8780664edb344138d3 357 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 18 355 7.1E-82 T 19-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 APA12_RS00325 74cccb8383cc5a8780664edb344138d3 357 Pfam PF01628 HrcA protein C terminal domain 118 341 2.7E-46 T 19-04-2016 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 APA12_RS00325 74cccb8383cc5a8780664edb344138d3 357 PIRSF PIRSF005485 13 357 4.6E-101 T 19-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 APA12_RS03370 70ac8bbcbd1d91ebcc6d27b0cd270361 227 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 33 218 1.7E-66 T 19-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 APA12_RS03370 70ac8bbcbd1d91ebcc6d27b0cd270361 227 PANTHER PTHR11649 45 223 3.3E-56 T 19-04-2016 APA12_RS03370 70ac8bbcbd1d91ebcc6d27b0cd270361 227 Pfam PF01926 50S ribosome-binding GTPase 52 170 4.2E-19 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 APA12_RS03370 70ac8bbcbd1d91ebcc6d27b0cd270361 227 Gene3D G3DSA:3.40.50.300 44 221 5.5E-41 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS03370 70ac8bbcbd1d91ebcc6d27b0cd270361 227 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 38 222 26.933 T 19-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 APA12_RS03370 70ac8bbcbd1d91ebcc6d27b0cd270361 227 PANTHER PTHR11649:SF58 45 223 3.3E-56 T 19-04-2016 APA12_RS03370 70ac8bbcbd1d91ebcc6d27b0cd270361 227 SUPERFAMILY SSF52540 40 222 6.26E-36 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS00215 60c24b6886690bb853bceb32549528b5 485 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 76 101 9.4E-16 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APA12_RS00215 60c24b6886690bb853bceb32549528b5 485 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 133 151 9.4E-16 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APA12_RS00215 60c24b6886690bb853bceb32549528b5 485 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 151 170 9.4E-16 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APA12_RS00215 60c24b6886690bb853bceb32549528b5 485 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 350 368 9.4E-16 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APA12_RS00215 60c24b6886690bb853bceb32549528b5 485 PANTHER PTHR11686 56 386 7.0E-34 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APA12_RS00215 60c24b6886690bb853bceb32549528b5 485 PANTHER PTHR11686:SF9 56 386 7.0E-34 T 19-04-2016 APA12_RS00215 60c24b6886690bb853bceb32549528b5 485 SUPERFAMILY SSF56235 49 477 1.23E-54 T 19-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APA12_RS00215 60c24b6886690bb853bceb32549528b5 485 Pfam PF01019 Gamma-glutamyltranspeptidase 317 387 1.2E-4 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APA12_RS00215 60c24b6886690bb853bceb32549528b5 485 Pfam PF01019 Gamma-glutamyltranspeptidase 69 289 2.5E-32 T 19-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APA12_RS12220 f6c51a0a9269a4034abb45b1d57c4d50 89 Pfam PF01527 Transposase 15 68 1.8E-6 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 APA12_RS12220 f6c51a0a9269a4034abb45b1d57c4d50 89 Gene3D G3DSA:1.10.10.60 14 77 1.4E-12 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS12220 f6c51a0a9269a4034abb45b1d57c4d50 89 SUPERFAMILY SSF46689 12 80 8.15E-13 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS11930 105758ef6bdaef132c7d7f68d8202b92 558 SUPERFAMILY SSF52518 361 553 1.22E-48 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS11930 105758ef6bdaef132c7d7f68d8202b92 558 Gene3D G3DSA:3.40.50.970 355 545 5.5E-56 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS11930 105758ef6bdaef132c7d7f68d8202b92 558 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 175 1.4E-32 T 19-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 APA12_RS11930 105758ef6bdaef132c7d7f68d8202b92 558 SUPERFAMILY SSF52518 3 179 9.82E-43 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS11930 105758ef6bdaef132c7d7f68d8202b92 558 SUPERFAMILY SSF52467 166 342 3.93E-28 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APA12_RS11930 105758ef6bdaef132c7d7f68d8202b92 558 PANTHER PTHR18968 2 555 1.9E-261 T 19-04-2016 APA12_RS11930 105758ef6bdaef132c7d7f68d8202b92 558 PANTHER PTHR18968:SF125 2 555 1.9E-261 T 19-04-2016 APA12_RS11930 105758ef6bdaef132c7d7f68d8202b92 558 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 200 305 2.6E-18 T 19-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 APA12_RS11930 105758ef6bdaef132c7d7f68d8202b92 558 Gene3D G3DSA:3.40.50.970 1 180 7.0E-70 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS11930 105758ef6bdaef132c7d7f68d8202b92 558 Gene3D G3DSA:3.40.50.1220 191 346 9.2E-46 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APA12_RS11930 105758ef6bdaef132c7d7f68d8202b92 558 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 405 529 6.3E-21 T 19-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 APA12_RS11930 105758ef6bdaef132c7d7f68d8202b92 558 PIRSF PIRSF036565 1 553 3.0E-198 T 19-04-2016 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme GO:0016831 APA12_RS10055 71d4f19c681f6d520d28fec58def5ca3 645 Gene3D G3DSA:3.40.390.10 397 474 3.6E-5 T 19-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APA12_RS10055 71d4f19c681f6d520d28fec58def5ca3 645 SUPERFAMILY SSF55486 59 631 2.01E-117 T 19-04-2016 APA12_RS10055 71d4f19c681f6d520d28fec58def5ca3 645 PANTHER PTHR11804:SF8 198 644 1.2E-70 T 19-04-2016 APA12_RS10055 71d4f19c681f6d520d28fec58def5ca3 645 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 66 644 9.8E-192 T 19-04-2016 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 APA12_RS10055 71d4f19c681f6d520d28fec58def5ca3 645 PANTHER PTHR11804 198 644 1.2E-70 T 19-04-2016 APA12_RS10055 71d4f19c681f6d520d28fec58def5ca3 645 Pfam PF01432 Peptidase family M3 254 630 2.4E-35 T 19-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 APA12_RS10055 71d4f19c681f6d520d28fec58def5ca3 645 Pfam PF08439 Oligopeptidase F 169 236 5.8E-19 T 19-04-2016 IPR013647 Oligopeptidase F, N-terminal domain APA12_RS05930 9a9c01c6c9e9642a6df13f1cc23d1eb7 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 185 1.5E-7 T 19-04-2016 APA12_RS05930 9a9c01c6c9e9642a6df13f1cc23d1eb7 247 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 245 4.6E-95 T 19-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 APA12_RS05930 9a9c01c6c9e9642a6df13f1cc23d1eb7 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 3.1E-50 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS05930 9a9c01c6c9e9642a6df13f1cc23d1eb7 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 3.1E-50 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS05930 9a9c01c6c9e9642a6df13f1cc23d1eb7 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 3.1E-50 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS05930 9a9c01c6c9e9642a6df13f1cc23d1eb7 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.1E-50 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS05930 9a9c01c6c9e9642a6df13f1cc23d1eb7 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 3.1E-50 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS05930 9a9c01c6c9e9642a6df13f1cc23d1eb7 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 3.1E-50 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS05930 9a9c01c6c9e9642a6df13f1cc23d1eb7 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 19-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APA12_RS05930 9a9c01c6c9e9642a6df13f1cc23d1eb7 247 Gene3D G3DSA:3.40.50.720 1 246 1.4E-90 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS05930 9a9c01c6c9e9642a6df13f1cc23d1eb7 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 2.0E-14 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS05930 9a9c01c6c9e9642a6df13f1cc23d1eb7 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 2.0E-14 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS05930 9a9c01c6c9e9642a6df13f1cc23d1eb7 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.0E-14 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS05930 9a9c01c6c9e9642a6df13f1cc23d1eb7 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 244 1.1E-65 T 19-04-2016 APA12_RS05930 9a9c01c6c9e9642a6df13f1cc23d1eb7 247 PANTHER PTHR24322:SF328 11 138 1.6E-57 T 19-04-2016 APA12_RS05930 9a9c01c6c9e9642a6df13f1cc23d1eb7 247 PANTHER PTHR24322:SF328 154 186 1.6E-57 T 19-04-2016 APA12_RS05930 9a9c01c6c9e9642a6df13f1cc23d1eb7 247 PANTHER PTHR24322 11 138 1.6E-57 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS05930 9a9c01c6c9e9642a6df13f1cc23d1eb7 247 PANTHER PTHR24322 154 186 1.6E-57 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS05930 9a9c01c6c9e9642a6df13f1cc23d1eb7 247 SUPERFAMILY SSF51735 5 246 1.32E-86 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS03485 d97c6d964b128f379ca26c5d8fa9f172 394 Gene3D G3DSA:1.50.10.10 13 381 5.3E-66 T 19-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 APA12_RS03485 d97c6d964b128f379ca26c5d8fa9f172 394 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 52 379 7.9E-60 T 19-04-2016 APA12_RS03485 d97c6d964b128f379ca26c5d8fa9f172 394 SUPERFAMILY SSF48208 17 388 1.36E-77 T 19-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APA12_RS03485 d97c6d964b128f379ca26c5d8fa9f172 394 PANTHER PTHR15108 8 394 7.3E-31 T 19-04-2016 APA12_RS05935 f08ec58f0058b40eab17b68dcd165c50 314 Pfam PF00698 Acyl transferase domain 6 282 2.6E-38 T 19-04-2016 IPR014043 Acyl transferase APA12_RS05935 f08ec58f0058b40eab17b68dcd165c50 314 PIRSF PIRSF000446 1 314 5.4E-96 T 19-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 APA12_RS05935 f08ec58f0058b40eab17b68dcd165c50 314 SUPERFAMILY SSF52151 194 312 4.71E-77 T 19-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APA12_RS05935 f08ec58f0058b40eab17b68dcd165c50 314 SUPERFAMILY SSF52151 4 126 4.71E-77 T 19-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APA12_RS05935 f08ec58f0058b40eab17b68dcd165c50 314 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 306 2.7E-42 T 19-04-2016 IPR020801 Polyketide synthase, acyl transferase domain APA12_RS05935 f08ec58f0058b40eab17b68dcd165c50 314 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 4 294 1.8E-97 T 19-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 APA12_RS05935 f08ec58f0058b40eab17b68dcd165c50 314 PANTHER PTHR10982 5 312 1.1E-136 T 19-04-2016 APA12_RS05935 f08ec58f0058b40eab17b68dcd165c50 314 SUPERFAMILY SSF55048 132 201 6.54E-15 T 19-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 APA12_RS05935 f08ec58f0058b40eab17b68dcd165c50 314 Gene3D G3DSA:3.30.70.250 129 200 3.5E-24 T 19-04-2016 APA12_RS05935 f08ec58f0058b40eab17b68dcd165c50 314 Gene3D G3DSA:3.40.366.10 4 126 2.9E-67 T 19-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 APA12_RS05935 f08ec58f0058b40eab17b68dcd165c50 314 Gene3D G3DSA:3.40.366.10 201 309 2.9E-67 T 19-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 APA12_RS08480 c71205f259b103a284fc160a5c3d3536 884 PANTHER PTHR11361 10 881 5.7E-286 T 19-04-2016 APA12_RS08480 c71205f259b103a284fc160a5c3d3536 884 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 710 726 - T 19-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APA12_RS08480 c71205f259b103a284fc160a5c3d3536 884 SMART SM00533 299 611 1.6E-62 T 19-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 APA12_RS08480 c71205f259b103a284fc160a5c3d3536 884 Pfam PF05192 MutS domain III 285 579 6.8E-28 T 19-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 APA12_RS08480 c71205f259b103a284fc160a5c3d3536 884 SUPERFAMILY SSF48334 283 582 7.85E-63 T 19-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 APA12_RS08480 c71205f259b103a284fc160a5c3d3536 884 Pfam PF05188 MutS domain II 158 265 6.2E-9 T 19-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 APA12_RS08480 c71205f259b103a284fc160a5c3d3536 884 Pfam PF00488 MutS domain V 632 819 7.6E-76 T 19-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APA12_RS08480 c71205f259b103a284fc160a5c3d3536 884 SMART SM00534 629 816 2.1E-100 T 19-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APA12_RS08480 c71205f259b103a284fc160a5c3d3536 884 Pfam PF05190 MutS family domain IV 447 539 3.0E-17 T 19-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 APA12_RS08480 c71205f259b103a284fc160a5c3d3536 884 Gene3D G3DSA:1.10.1420.10 280 486 5.1E-38 T 19-04-2016 APA12_RS08480 c71205f259b103a284fc160a5c3d3536 884 Gene3D G3DSA:3.30.420.110 133 270 1.3E-18 T 19-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 APA12_RS08480 c71205f259b103a284fc160a5c3d3536 884 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 10 872 2.6E-224 T 19-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 APA12_RS08480 c71205f259b103a284fc160a5c3d3536 884 SUPERFAMILY SSF52540 587 820 3.37E-57 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS08480 c71205f259b103a284fc160a5c3d3536 884 Pfam PF01624 MutS domain I 10 126 3.5E-36 T 19-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 APA12_RS08480 c71205f259b103a284fc160a5c3d3536 884 PANTHER PTHR11361:SF86 10 881 5.7E-286 T 19-04-2016 APA12_RS08480 c71205f259b103a284fc160a5c3d3536 884 Gene3D G3DSA:3.40.50.300 587 820 8.5E-79 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS08480 c71205f259b103a284fc160a5c3d3536 884 SUPERFAMILY SSF55271 4 121 2.35E-35 T 19-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 APA12_RS08480 c71205f259b103a284fc160a5c3d3536 884 Gene3D G3DSA:3.40.1170.10 6 126 4.3E-43 T 19-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 APA12_RS08480 c71205f259b103a284fc160a5c3d3536 884 SUPERFAMILY SSF53150 123 294 2.09E-23 T 19-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 APA12_RS09770 7401fa9f1379362be7949c078aa58145 331 SUPERFAMILY SSF103515 175 307 1.57E-7 T 19-04-2016 IPR005546 Autotransporter beta-domain APA12_RS09770 7401fa9f1379362be7949c078aa58145 331 Pfam PF05275 Copper resistance protein B precursor (CopB) 122 331 1.7E-74 T 19-04-2016 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 APA12_RS12605 81a67084e8938279e5be23c95f53a1f1 331 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 37 96 5.5E-9 T 19-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APA12_RS12605 81a67084e8938279e5be23c95f53a1f1 331 PANTHER PTHR11695 24 331 6.7E-117 T 19-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APA12_RS12605 81a67084e8938279e5be23c95f53a1f1 331 SUPERFAMILY SSF50129 15 149 8.83E-38 T 19-04-2016 IPR011032 GroES-like APA12_RS12605 81a67084e8938279e5be23c95f53a1f1 331 Gene3D G3DSA:3.40.50.720 155 260 3.7E-25 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS12605 81a67084e8938279e5be23c95f53a1f1 331 Pfam PF00107 Zinc-binding dehydrogenase 159 263 3.7E-25 T 19-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APA12_RS12605 81a67084e8938279e5be23c95f53a1f1 331 Gene3D G3DSA:3.90.180.10 12 154 3.2E-41 T 19-04-2016 IPR011032 GroES-like APA12_RS12605 81a67084e8938279e5be23c95f53a1f1 331 SUPERFAMILY SSF51735 120 281 5.02E-39 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS12605 81a67084e8938279e5be23c95f53a1f1 331 SMART SM00829 19 329 1.1E-20 T 19-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APA12_RS12605 81a67084e8938279e5be23c95f53a1f1 331 PANTHER PTHR11695:SF605 24 331 6.7E-117 T 19-04-2016 APA12_RS08430 1f564efd913be779360ba8fe75fb7179 154 SUPERFAMILY SSF46785 3 130 3.29E-29 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS08430 1f564efd913be779360ba8fe75fb7179 154 Gene3D G3DSA:1.10.10.10 3 131 5.6E-30 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS08430 1f564efd913be779360ba8fe75fb7179 154 TIGRFAM TIGR02944 suf_reg_Xantho: FeS assembly SUF system regulator 1 128 4.5E-35 T 19-04-2016 IPR014290 SUF system FeS cluster assembly regulator APA12_RS08430 1f564efd913be779360ba8fe75fb7179 154 PANTHER PTHR33221:SF2 3 128 5.7E-36 T 19-04-2016 APA12_RS08430 1f564efd913be779360ba8fe75fb7179 154 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 3 128 2.3E-28 T 19-04-2016 IPR000944 Transcription regulator Rrf2-type APA12_RS08430 1f564efd913be779360ba8fe75fb7179 154 Pfam PF02082 Transcriptional regulator 3 82 2.7E-20 T 19-04-2016 IPR000944 Transcription regulator Rrf2-type APA12_RS08430 1f564efd913be779360ba8fe75fb7179 154 PANTHER PTHR33221 3 128 5.7E-36 T 19-04-2016 APA12_RS11980 c2f720fbde2175a9532de947ee706390 308 Gene3D G3DSA:3.60.15.10 27 270 4.4E-47 T 19-04-2016 IPR001279 Metallo-beta-lactamase APA12_RS11980 c2f720fbde2175a9532de947ee706390 308 SUPERFAMILY SSF56281 33 274 7.85E-45 T 19-04-2016 IPR001279 Metallo-beta-lactamase APA12_RS11980 c2f720fbde2175a9532de947ee706390 308 SMART SM00849 35 225 2.6E-19 T 19-04-2016 IPR001279 Metallo-beta-lactamase APA12_RS11980 c2f720fbde2175a9532de947ee706390 308 PANTHER PTHR11935:SF110 1 306 8.1E-110 T 19-04-2016 APA12_RS11980 c2f720fbde2175a9532de947ee706390 308 PANTHER PTHR11935 1 306 8.1E-110 T 19-04-2016 APA12_RS11980 c2f720fbde2175a9532de947ee706390 308 Pfam PF00753 Metallo-beta-lactamase superfamily 49 225 1.8E-15 T 19-04-2016 IPR001279 Metallo-beta-lactamase APA12_RS01685 3c026abbc7063d739210e9a7e18711f9 625 PIRSF PIRSF002583 1 624 4.4E-194 T 19-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 APA12_RS01685 3c026abbc7063d739210e9a7e18711f9 625 Gene3D G3DSA:3.30.565.10 13 235 2.7E-75 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS01685 3c026abbc7063d739210e9a7e18711f9 625 PANTHER PTHR11528:SF44 1 616 4.5E-257 T 19-04-2016 APA12_RS01685 3c026abbc7063d739210e9a7e18711f9 625 SUPERFAMILY SSF110942 502 614 3.27E-25 T 19-04-2016 APA12_RS01685 3c026abbc7063d739210e9a7e18711f9 625 PRINTS PR00775 90kDa heat shock protein signature 34 56 5.6E-55 T 19-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APA12_RS01685 3c026abbc7063d739210e9a7e18711f9 625 PRINTS PR00775 90kDa heat shock protein signature 178 195 5.6E-55 T 19-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APA12_RS01685 3c026abbc7063d739210e9a7e18711f9 625 PRINTS PR00775 90kDa heat shock protein signature 82 99 5.6E-55 T 19-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APA12_RS01685 3c026abbc7063d739210e9a7e18711f9 625 PRINTS PR00775 90kDa heat shock protein signature 100 117 5.6E-55 T 19-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APA12_RS01685 3c026abbc7063d739210e9a7e18711f9 625 PRINTS PR00775 90kDa heat shock protein signature 196 214 5.6E-55 T 19-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APA12_RS01685 3c026abbc7063d739210e9a7e18711f9 625 PRINTS PR00775 90kDa heat shock protein signature 13 33 5.6E-55 T 19-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APA12_RS01685 3c026abbc7063d739210e9a7e18711f9 625 PRINTS PR00775 90kDa heat shock protein signature 128 150 5.6E-55 T 19-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APA12_RS01685 3c026abbc7063d739210e9a7e18711f9 625 Hamap MF_00505 Chaperone protein HtpG [htpG]. 10 615 28.306 T 19-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 APA12_RS01685 3c026abbc7063d739210e9a7e18711f9 625 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 37 162 4.4E-14 T 19-04-2016 APA12_RS01685 3c026abbc7063d739210e9a7e18711f9 625 PANTHER PTHR11528 1 616 4.5E-257 T 19-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 APA12_RS01685 3c026abbc7063d739210e9a7e18711f9 625 SUPERFAMILY SSF54211 229 478 6.6E-83 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APA12_RS01685 3c026abbc7063d739210e9a7e18711f9 625 Pfam PF00183 Hsp90 protein 222 618 3.0E-106 T 19-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 APA12_RS01685 3c026abbc7063d739210e9a7e18711f9 625 SUPERFAMILY SSF55874 13 219 7.6E-60 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS05630 29a301a6aed38ec3b7a3c48f4c9bfc60 233 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 73 88 - T 19-04-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APA12_RS05630 29a301a6aed38ec3b7a3c48f4c9bfc60 233 Hamap MF_00013 Octanoyltransferase [lipB]. 4 219 33.375 T 19-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APA12_RS05630 29a301a6aed38ec3b7a3c48f4c9bfc60 233 PANTHER PTHR10993 4 217 7.1E-61 T 19-04-2016 APA12_RS05630 29a301a6aed38ec3b7a3c48f4c9bfc60 233 Pfam PF03099 Biotin/lipoate A/B protein ligase family 73 172 7.7E-8 T 19-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 APA12_RS05630 29a301a6aed38ec3b7a3c48f4c9bfc60 233 PIRSF PIRSF016262 1 228 1.6E-53 T 19-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APA12_RS05630 29a301a6aed38ec3b7a3c48f4c9bfc60 233 SUPERFAMILY SSF55681 11 218 1.99E-59 T 19-04-2016 APA12_RS05630 29a301a6aed38ec3b7a3c48f4c9bfc60 233 Gene3D G3DSA:3.90.1550.10 3 216 8.3E-66 T 19-04-2016 APA12_RS05630 29a301a6aed38ec3b7a3c48f4c9bfc60 233 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 78 125 7.0E-12 T 19-04-2016 APA12_RS05630 29a301a6aed38ec3b7a3c48f4c9bfc60 233 PANTHER PTHR10993:SF10 4 217 7.1E-61 T 19-04-2016 APA12_RS05630 29a301a6aed38ec3b7a3c48f4c9bfc60 233 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 32 196 9.5E-41 T 19-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APA12_RS13195 9198411fbacf61a6fd1ce2bae5b71d88 256 Gene3D G3DSA:3.40.1280.10 16 175 1.2E-29 T 19-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APA12_RS13195 9198411fbacf61a6fd1ce2bae5b71d88 256 SUPERFAMILY SSF75217 17 178 1.18E-31 T 19-04-2016 IPR029028 Alpha/beta knot methyltransferases APA12_RS13195 9198411fbacf61a6fd1ce2bae5b71d88 256 PANTHER PTHR12029 18 196 5.6E-22 T 19-04-2016 APA12_RS13195 9198411fbacf61a6fd1ce2bae5b71d88 256 Pfam PF00588 SpoU rRNA Methylase family 18 168 1.4E-26 T 19-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 APA12_RS13195 9198411fbacf61a6fd1ce2bae5b71d88 256 PIRSF PIRSF004808 13 256 7.8E-79 T 19-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 APA12_RS06435 4e39a95808cfe312fb905e48bcbd63d2 456 Pfam PF01979 Amidohydrolase family 55 425 5.7E-56 T 19-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APA12_RS06435 4e39a95808cfe312fb905e48bcbd63d2 456 Gene3D G3DSA:2.30.40.10 3 63 7.8E-16 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APA12_RS06435 4e39a95808cfe312fb905e48bcbd63d2 456 PANTHER PTHR11271 3 452 4.9E-109 T 19-04-2016 APA12_RS06435 4e39a95808cfe312fb905e48bcbd63d2 456 Gene3D G3DSA:3.20.20.140 64 396 2.7E-88 T 19-04-2016 APA12_RS06435 4e39a95808cfe312fb905e48bcbd63d2 456 SUPERFAMILY SSF51556 58 376 3.69E-85 T 19-04-2016 IPR032466 Metal-dependent hydrolase APA12_RS06435 4e39a95808cfe312fb905e48bcbd63d2 456 SUPERFAMILY SSF51338 1 67 1.48E-13 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APA12_RS06435 4e39a95808cfe312fb905e48bcbd63d2 456 PANTHER PTHR11271:SF37 3 452 4.9E-109 T 19-04-2016 APA12_RS06435 4e39a95808cfe312fb905e48bcbd63d2 456 SUPERFAMILY SSF51338 351 454 6.79E-24 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APA12_RS01535 7351b8c4a31a3dab11bd9b924c2046fa 282 PANTHER PTHR37323 29 273 2.9E-46 T 19-04-2016 APA12_RS01535 7351b8c4a31a3dab11bd9b924c2046fa 282 Pfam PF13444 Acetyltransferase (GNAT) domain 46 153 2.3E-34 T 19-04-2016 APA12_RS01535 7351b8c4a31a3dab11bd9b924c2046fa 282 SUPERFAMILY SSF55729 29 249 2.39E-39 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase APA12_RS01535 7351b8c4a31a3dab11bd9b924c2046fa 282 PANTHER PTHR37323:SF1 29 273 2.9E-46 T 19-04-2016 APA12_RS01535 7351b8c4a31a3dab11bd9b924c2046fa 282 Gene3D G3DSA:3.40.630.30 31 173 7.9E-24 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase APA12_RS03475 1f09bc4391bbafa52d96131ac40fc1f8 217 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 19 196 2.3E-68 T 19-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 APA12_RS03475 1f09bc4391bbafa52d96131ac40fc1f8 217 Gene3D G3DSA:3.40.50.300 28 60 5.6E-4 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS03475 1f09bc4391bbafa52d96131ac40fc1f8 217 ProSitePatterns PS00856 Guanylate kinase-like signature. 51 68 - T 19-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 APA12_RS03475 1f09bc4391bbafa52d96131ac40fc1f8 217 Pfam PF00625 Guanylate kinase 20 196 2.1E-43 T 19-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit APA12_RS03475 1f09bc4391bbafa52d96131ac40fc1f8 217 PANTHER PTHR23117 20 212 1.7E-84 T 19-04-2016 APA12_RS03475 1f09bc4391bbafa52d96131ac40fc1f8 217 SMART SM00072 16 199 2.4E-57 T 19-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit APA12_RS03475 1f09bc4391bbafa52d96131ac40fc1f8 217 PANTHER PTHR23117:SF13 20 212 1.7E-84 T 19-04-2016 APA12_RS03475 1f09bc4391bbafa52d96131ac40fc1f8 217 Gene3D G3DSA:3.30.63.10 61 98 4.7E-26 T 19-04-2016 APA12_RS03475 1f09bc4391bbafa52d96131ac40fc1f8 217 SUPERFAMILY SSF52540 15 201 8.58E-64 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS03475 1f09bc4391bbafa52d96131ac40fc1f8 217 Gene3D G3DSA:3.40.50.300 99 206 1.0E-43 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS03475 1f09bc4391bbafa52d96131ac40fc1f8 217 Gene3D G3DSA:3.40.50.300 14 27 1.0E-43 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS03475 1f09bc4391bbafa52d96131ac40fc1f8 217 Hamap MF_00328 Guanylate kinase [gmk]. 15 199 35.337 T 19-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 APA12_RS11000 bb55832ad3455175fd5ae3f596c1cbe8 783 Pfam PF07715 TonB-dependent Receptor Plug Domain 73 168 3.2E-7 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS11000 bb55832ad3455175fd5ae3f596c1cbe8 783 Gene3D G3DSA:2.40.170.20 166 783 3.6E-59 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS11000 bb55832ad3455175fd5ae3f596c1cbe8 783 SUPERFAMILY SSF56935 70 783 2.27E-67 T 19-04-2016 APA12_RS11000 bb55832ad3455175fd5ae3f596c1cbe8 783 Gene3D G3DSA:2.170.130.10 71 165 2.1E-6 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS11000 bb55832ad3455175fd5ae3f596c1cbe8 783 Pfam PF00593 TonB dependent receptor 506 763 5.9E-18 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS05050 c78b2cdef7454d6c07ee8854b8fdd1b5 370 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 6 366 2.2E-78 T 19-04-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 APA12_RS05050 c78b2cdef7454d6c07ee8854b8fdd1b5 370 PANTHER PTHR33529:SF1 1 369 2.5E-55 T 19-04-2016 APA12_RS05050 c78b2cdef7454d6c07ee8854b8fdd1b5 370 PANTHER PTHR33529 1 369 2.5E-55 T 19-04-2016 APA12_RS05050 c78b2cdef7454d6c07ee8854b8fdd1b5 370 Pfam PF03739 Predicted permease YjgP/YjgQ family 9 365 1.3E-56 T 19-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 APA12_RS12670 a69ef88a30b5ed5a3893783886028396 419 Pfam PF01266 FAD dependent oxidoreductase 2 398 2.1E-68 T 19-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 APA12_RS12670 a69ef88a30b5ed5a3893783886028396 419 SUPERFAMILY SSF51905 1 54 9.32E-58 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS12670 a69ef88a30b5ed5a3893783886028396 419 SUPERFAMILY SSF51905 360 416 9.32E-58 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS12670 a69ef88a30b5ed5a3893783886028396 419 SUPERFAMILY SSF51905 107 270 9.32E-58 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS12670 a69ef88a30b5ed5a3893783886028396 419 SUPERFAMILY SSF54373 270 360 4.32E-15 T 19-04-2016 APA12_RS12670 a69ef88a30b5ed5a3893783886028396 419 PANTHER PTHR13847 1 63 1.3E-207 T 19-04-2016 APA12_RS12670 a69ef88a30b5ed5a3893783886028396 419 PANTHER PTHR13847 107 419 1.3E-207 T 19-04-2016 APA12_RS12670 a69ef88a30b5ed5a3893783886028396 419 Gene3D G3DSA:3.50.50.60 108 122 1.4E-53 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS12670 a69ef88a30b5ed5a3893783886028396 419 Gene3D G3DSA:3.50.50.60 190 269 1.4E-53 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS12670 a69ef88a30b5ed5a3893783886028396 419 Gene3D G3DSA:3.50.50.60 360 417 1.4E-53 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS12670 a69ef88a30b5ed5a3893783886028396 419 Gene3D G3DSA:3.50.50.60 1 55 1.4E-53 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS12670 a69ef88a30b5ed5a3893783886028396 419 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 48.23 T 19-04-2016 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 UniPathway: UPA00043 APA12_RS12670 a69ef88a30b5ed5a3893783886028396 419 Gene3D G3DSA:3.30.9.10 134 189 3.8E-15 T 19-04-2016 APA12_RS12670 a69ef88a30b5ed5a3893783886028396 419 Gene3D G3DSA:3.30.9.10 270 359 3.8E-15 T 19-04-2016 APA12_RS12670 a69ef88a30b5ed5a3893783886028396 419 PANTHER PTHR13847:SF148 1 63 1.3E-207 T 19-04-2016 APA12_RS12670 a69ef88a30b5ed5a3893783886028396 419 PANTHER PTHR13847:SF148 107 419 1.3E-207 T 19-04-2016 APA12_RS07840 79c9698b7e93b390d42be5c8f94b2024 199 SUPERFAMILY SSF53335 13 166 1.21E-20 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS07840 79c9698b7e93b390d42be5c8f94b2024 199 Pfam PF05401 Nodulation protein S (NodS) 18 184 1.7E-19 T 19-04-2016 IPR008715 SAM-dependent methyltransferase, NodS-related GO:0008757|GO:0009312|GO:0009877 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- APA12_RS07840 79c9698b7e93b390d42be5c8f94b2024 199 Gene3D G3DSA:3.40.50.150 15 162 2.8E-18 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS05260 100eeb0865c2f387a26916d98374dff8 343 SUPERFAMILY SSF53659 6 340 1.1E-119 T 19-04-2016 APA12_RS05260 100eeb0865c2f387a26916d98374dff8 343 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 11 336 1.0E-100 T 19-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APA12_RS05260 100eeb0865c2f387a26916d98374dff8 343 SMART SM01329 7 338 6.4E-166 T 19-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APA12_RS05260 100eeb0865c2f387a26916d98374dff8 343 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 234 253 - T 19-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 APA12_RS05260 100eeb0865c2f387a26916d98374dff8 343 PANTHER PTHR11835 4 337 1.5E-162 T 19-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 APA12_RS05260 100eeb0865c2f387a26916d98374dff8 343 Gene3D G3DSA:3.40.718.10 6 341 2.9E-126 T 19-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APA12_RS08490 6cb594bcefd982b42b3c42f37f5516d2 501 PANTHER PTHR34217 1 500 9.2E-196 T 19-04-2016 APA12_RS08490 6cb594bcefd982b42b3c42f37f5516d2 501 PANTHER PTHR34217:SF1 1 500 9.2E-196 T 19-04-2016 APA12_RS08490 6cb594bcefd982b42b3c42f37f5516d2 501 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 401 422 1.8E-46 T 19-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 APA12_RS08490 6cb594bcefd982b42b3c42f37f5516d2 501 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 332 351 1.8E-46 T 19-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 APA12_RS08490 6cb594bcefd982b42b3c42f37f5516d2 501 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 262 281 1.8E-46 T 19-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 APA12_RS08490 6cb594bcefd982b42b3c42f37f5516d2 501 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 378 395 1.8E-46 T 19-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 APA12_RS08490 6cb594bcefd982b42b3c42f37f5516d2 501 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 145 165 1.8E-46 T 19-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 APA12_RS08490 6cb594bcefd982b42b3c42f37f5516d2 501 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 242 261 1.8E-46 T 19-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 APA12_RS08490 6cb594bcefd982b42b3c42f37f5516d2 501 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 446 464 1.8E-46 T 19-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 APA12_RS08490 6cb594bcefd982b42b3c42f37f5516d2 501 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 289 305 1.8E-46 T 19-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 APA12_RS08490 6cb594bcefd982b42b3c42f37f5516d2 501 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 13 488 1.4E-77 T 19-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 APA12_RS08490 6cb594bcefd982b42b3c42f37f5516d2 501 PIRSF PIRSF006615 1 499 5.0E-165 T 19-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 APA12_RS08490 6cb594bcefd982b42b3c42f37f5516d2 501 SUPERFAMILY SSF55486 4 494 1.83E-104 T 19-04-2016 APA12_RS08605 ae7410e962efed1168005a30514021cf 106 Gene3D G3DSA:4.10.520.10 3 94 2.7E-30 T 19-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APA12_RS08605 ae7410e962efed1168005a30514021cf 106 SMART SM00411 4 93 4.9E-32 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APA12_RS08605 ae7410e962efed1168005a30514021cf 106 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 49 68 - T 19-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 APA12_RS08605 ae7410e962efed1168005a30514021cf 106 PANTHER PTHR33175 4 95 6.5E-42 T 19-04-2016 APA12_RS08605 ae7410e962efed1168005a30514021cf 106 SUPERFAMILY SSF47729 4 94 3.39E-27 T 19-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APA12_RS08605 ae7410e962efed1168005a30514021cf 106 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 3 94 5.4E-37 T 19-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 APA12_RS08605 ae7410e962efed1168005a30514021cf 106 PANTHER PTHR33175:SF2 4 95 6.5E-42 T 19-04-2016 APA12_RS08605 ae7410e962efed1168005a30514021cf 106 Pfam PF00216 Bacterial DNA-binding protein 4 93 7.3E-29 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APA12_RS08605 ae7410e962efed1168005a30514021cf 106 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 2 98 26.088 T 19-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 APA12_RS08605 ae7410e962efed1168005a30514021cf 106 PRINTS PR01727 Prokaryotic integration host factor signature 43 58 1.4E-13 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APA12_RS08605 ae7410e962efed1168005a30514021cf 106 PRINTS PR01727 Prokaryotic integration host factor signature 77 91 1.4E-13 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APA12_RS08605 ae7410e962efed1168005a30514021cf 106 PRINTS PR01727 Prokaryotic integration host factor signature 61 74 1.4E-13 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APA12_RS11645 4ba492591817a4125cb31ff62e7906c9 414 SUPERFAMILY SSF53955 40 185 6.68E-34 T 19-04-2016 IPR023346 Lysozyme-like domain APA12_RS11645 4ba492591817a4125cb31ff62e7906c9 414 PANTHER PTHR21666 32 192 3.0E-21 T 19-04-2016 APA12_RS11645 4ba492591817a4125cb31ff62e7906c9 414 Pfam PF01464 Transglycosylase SLT domain 62 173 1.5E-20 T 19-04-2016 IPR008258 Transglycosylase SLT domain 1 APA12_RS11645 4ba492591817a4125cb31ff62e7906c9 414 Gene3D G3DSA:1.10.530.10 58 185 9.6E-36 T 19-04-2016 APA12_RS07015 334f135ef4e42fa5f7cd11f86e9b2ee3 453 SUPERFAMILY SSF103473 9 437 6.41E-65 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS07015 334f135ef4e42fa5f7cd11f86e9b2ee3 453 ProSitePatterns PS00217 Sugar transport proteins signature 2. 124 149 - T 19-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APA12_RS07015 334f135ef4e42fa5f7cd11f86e9b2ee3 453 PANTHER PTHR23508:SF7 5 452 2.7E-174 T 19-04-2016 APA12_RS07015 334f135ef4e42fa5f7cd11f86e9b2ee3 453 PANTHER PTHR23508 5 452 2.7E-174 T 19-04-2016 APA12_RS07015 334f135ef4e42fa5f7cd11f86e9b2ee3 453 Pfam PF07690 Major Facilitator Superfamily 47 374 1.8E-24 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APA12_RS07015 334f135ef4e42fa5f7cd11f86e9b2ee3 453 Gene3D G3DSA:1.20.1250.20 241 434 2.6E-19 T 19-04-2016 APA12_RS07015 334f135ef4e42fa5f7cd11f86e9b2ee3 453 Gene3D G3DSA:1.20.1250.20 15 217 5.5E-22 T 19-04-2016 APA12_RS02485 c88ccf5e3d56c67f1f9db5e6269cd98e 738 PANTHER PTHR32552 57 738 6.9E-126 T 19-04-2016 APA12_RS02485 c88ccf5e3d56c67f1f9db5e6269cd98e 738 Gene3D G3DSA:2.170.130.10 66 191 5.3E-32 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS02485 c88ccf5e3d56c67f1f9db5e6269cd98e 738 Pfam PF07715 TonB-dependent Receptor Plug Domain 82 184 1.8E-18 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS02485 c88ccf5e3d56c67f1f9db5e6269cd98e 738 SUPERFAMILY SSF56935 54 738 1.08E-115 T 19-04-2016 APA12_RS02485 c88ccf5e3d56c67f1f9db5e6269cd98e 738 Gene3D G3DSA:2.40.170.20 200 738 1.2E-125 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS02485 c88ccf5e3d56c67f1f9db5e6269cd98e 738 Pfam PF00593 TonB dependent receptor 492 735 2.2E-23 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS02485 c88ccf5e3d56c67f1f9db5e6269cd98e 738 PANTHER PTHR32552:SF17 57 738 6.9E-126 T 19-04-2016 APA12_RS02485 c88ccf5e3d56c67f1f9db5e6269cd98e 738 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 83 734 9.6E-87 T 19-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 APA12_RS02370 3b8004779b4ceec12f3669ba79c13f1c 423 Pfam PF07690 Major Facilitator Superfamily 33 371 2.8E-31 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APA12_RS02370 3b8004779b4ceec12f3669ba79c13f1c 423 SUPERFAMILY SSF103473 1 418 5.75E-56 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS02370 3b8004779b4ceec12f3669ba79c13f1c 423 Gene3D G3DSA:1.20.1250.20 235 421 8.6E-17 T 19-04-2016 APA12_RS02370 3b8004779b4ceec12f3669ba79c13f1c 423 PANTHER PTHR23512 24 381 1.1E-56 T 19-04-2016 APA12_RS02370 3b8004779b4ceec12f3669ba79c13f1c 423 PANTHER PTHR23512:SF1 24 381 1.1E-56 T 19-04-2016 APA12_RS02370 3b8004779b4ceec12f3669ba79c13f1c 423 Gene3D G3DSA:1.20.1250.20 27 205 3.0E-26 T 19-04-2016 APA12_RS09560 e6d65754702cb9e0018b00ffa155319d 339 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 1.2E-34 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 APA12_RS09560 e6d65754702cb9e0018b00ffa155319d 339 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 1.2E-34 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 APA12_RS09560 e6d65754702cb9e0018b00ffa155319d 339 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 1.2E-34 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 APA12_RS09560 e6d65754702cb9e0018b00ffa155319d 339 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 1.2E-34 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 APA12_RS09560 e6d65754702cb9e0018b00ffa155319d 339 Pfam PF01926 50S ribosome-binding GTPase 161 281 2.3E-23 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 APA12_RS09560 e6d65754702cb9e0018b00ffa155319d 339 Gene3D G3DSA:2.70.210.12 2 155 2.5E-56 T 19-04-2016 IPR006169 GTP1/OBG domain GO:0005525 APA12_RS09560 e6d65754702cb9e0018b00ffa155319d 339 SUPERFAMILY SSF82051 2 158 1.05E-53 T 19-04-2016 IPR006169 GTP1/OBG domain GO:0005525 APA12_RS09560 e6d65754702cb9e0018b00ffa155319d 339 Hamap MF_01454 GTPase Obg [obg]. 2 328 45.728 T 19-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 APA12_RS09560 e6d65754702cb9e0018b00ffa155319d 339 Gene3D G3DSA:3.40.50.300 160 335 2.8E-52 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS09560 e6d65754702cb9e0018b00ffa155319d 339 PIRSF PIRSF002401 1 338 3.5E-130 T 19-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 APA12_RS09560 e6d65754702cb9e0018b00ffa155319d 339 PANTHER PTHR11702:SF3 1 336 2.7E-151 T 19-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 APA12_RS09560 e6d65754702cb9e0018b00ffa155319d 339 Pfam PF01018 GTP1/OBG 3 158 3.4E-59 T 19-04-2016 IPR006169 GTP1/OBG domain GO:0005525 APA12_RS09560 e6d65754702cb9e0018b00ffa155319d 339 PANTHER PTHR11702 1 336 2.7E-151 T 19-04-2016 APA12_RS09560 e6d65754702cb9e0018b00ffa155319d 339 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 19-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 APA12_RS09560 e6d65754702cb9e0018b00ffa155319d 339 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 326 4.8E-137 T 19-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 APA12_RS09560 e6d65754702cb9e0018b00ffa155319d 339 SUPERFAMILY SSF52540 150 331 1.09E-48 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS09965 a19d33867201e97cafcbe29efca02563 629 SUPERFAMILY SSF52540 294 507 3.66E-46 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS09965 a19d33867201e97cafcbe29efca02563 629 ProSitePatterns PS00211 ABC transporters family signature. 430 444 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APA12_RS09965 a19d33867201e97cafcbe29efca02563 629 Pfam PF12848 ABC transporter 216 299 1.9E-21 T 19-04-2016 IPR032781 ABC-transporter extension domain APA12_RS09965 a19d33867201e97cafcbe29efca02563 629 PANTHER PTHR19211 4 553 1.8E-254 T 19-04-2016 APA12_RS09965 a19d33867201e97cafcbe29efca02563 629 SMART SM00382 28 222 1.2E-12 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS09965 a19d33867201e97cafcbe29efca02563 629 SMART SM00382 336 503 1.3E-11 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS09965 a19d33867201e97cafcbe29efca02563 629 Pfam PF16326 ABC transporter C-terminal domain 559 617 3.4E-9 T 19-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 APA12_RS09965 a19d33867201e97cafcbe29efca02563 629 SUPERFAMILY SSF52540 4 245 2.38E-47 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS09965 a19d33867201e97cafcbe29efca02563 629 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APA12_RS09965 a19d33867201e97cafcbe29efca02563 629 Gene3D G3DSA:3.40.50.300 310 531 4.0E-44 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS09965 a19d33867201e97cafcbe29efca02563 629 Gene3D G3DSA:3.40.50.300 3 264 7.8E-49 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS09965 a19d33867201e97cafcbe29efca02563 629 Pfam PF00005 ABC transporter 19 177 6.5E-25 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS09965 a19d33867201e97cafcbe29efca02563 629 Pfam PF00005 ABC transporter 327 458 1.9E-20 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS02335 bc0edb1e2162979bc7db576d60efeffe 434 SUPERFAMILY SSF46626 48 171 7.75E-19 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS02335 bc0edb1e2162979bc7db576d60efeffe 434 Gene3D G3DSA:1.10.760.10 51 152 4.0E-15 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS02335 bc0edb1e2162979bc7db576d60efeffe 434 Gene3D G3DSA:1.10.760.10 194 303 3.0E-10 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS02335 bc0edb1e2162979bc7db576d60efeffe 434 PANTHER PTHR35008:SF5 24 434 3.0E-97 T 19-04-2016 APA12_RS02335 bc0edb1e2162979bc7db576d60efeffe 434 PANTHER PTHR35008 24 434 3.0E-97 T 19-04-2016 APA12_RS02335 bc0edb1e2162979bc7db576d60efeffe 434 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 329 410 3.6E-9 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS02335 bc0edb1e2162979bc7db576d60efeffe 434 SUPERFAMILY SSF46626 188 308 2.12E-15 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS02335 bc0edb1e2162979bc7db576d60efeffe 434 Pfam PF00034 Cytochrome c 51 152 5.7E-6 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS02335 bc0edb1e2162979bc7db576d60efeffe 434 Gene3D G3DSA:1.10.760.10 330 426 2.4E-14 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS02335 bc0edb1e2162979bc7db576d60efeffe 434 SUPERFAMILY SSF46626 330 417 3.92E-15 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS02335 bc0edb1e2162979bc7db576d60efeffe 434 PIRSF PIRSF000018 18 434 1.3E-120 T 19-04-2016 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 APA12_RS09310 150bf439c6cfc65b7a478ee75219b7d9 402 Gene3D G3DSA:3.90.1150.10 263 398 2.1E-45 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APA12_RS09310 150bf439c6cfc65b7a478ee75219b7d9 402 Gene3D G3DSA:3.40.640.10 13 262 2.0E-87 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APA12_RS09310 150bf439c6cfc65b7a478ee75219b7d9 402 PIRSF PIRSF001434 1 400 6.7E-127 T 19-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APA12_RS09310 150bf439c6cfc65b7a478ee75219b7d9 402 PANTHER PTHR11808:SF36 10 401 1.4E-195 T 19-04-2016 APA12_RS09310 150bf439c6cfc65b7a478ee75219b7d9 402 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 16 395 1.7E-132 T 19-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APA12_RS09310 150bf439c6cfc65b7a478ee75219b7d9 402 PANTHER PTHR11808 10 401 1.4E-195 T 19-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APA12_RS09310 150bf439c6cfc65b7a478ee75219b7d9 402 SUPERFAMILY SSF53383 36 397 2.26E-117 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APA12_RS09310 150bf439c6cfc65b7a478ee75219b7d9 402 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 16 395 2.4E-169 T 19-04-2016 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 UniPathway: UPA00051 APA12_RS05795 5768e8bc8b73062f30f870e2001fe855 270 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 12 20 - T 19-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 APA12_RS05795 5768e8bc8b73062f30f870e2001fe855 270 Gene3D G3DSA:3.20.20.140 8 267 2.0E-75 T 19-04-2016 APA12_RS05795 5768e8bc8b73062f30f870e2001fe855 270 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 203 219 - T 19-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 APA12_RS05795 5768e8bc8b73062f30f870e2001fe855 270 PIRSF PIRSF005902 1 270 1.0E-67 T 19-04-2016 IPR001130 TatD family GO:0016788 APA12_RS05795 5768e8bc8b73062f30f870e2001fe855 270 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 12 267 9.6E-73 T 19-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 APA12_RS05795 5768e8bc8b73062f30f870e2001fe855 270 SUPERFAMILY SSF51556 12 267 1.27E-72 T 19-04-2016 IPR032466 Metal-dependent hydrolase APA12_RS05795 5768e8bc8b73062f30f870e2001fe855 270 PANTHER PTHR10060:SF20 12 270 2.9E-96 T 19-04-2016 APA12_RS05795 5768e8bc8b73062f30f870e2001fe855 270 Pfam PF01026 TatD related DNase 13 266 5.4E-68 T 19-04-2016 IPR001130 TatD family GO:0016788 APA12_RS05795 5768e8bc8b73062f30f870e2001fe855 270 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 137 147 - T 19-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 APA12_RS05795 5768e8bc8b73062f30f870e2001fe855 270 PANTHER PTHR10060 12 270 2.9E-96 T 19-04-2016 IPR001130 TatD family GO:0016788 APA12_RS13485 efec9d81a253fc8d574a5d6d35183e0f 307 SMART SM00470 48 140 4.8E-36 T 19-04-2016 IPR003115 ParB/Sulfiredoxin APA12_RS13485 efec9d81a253fc8d574a5d6d35183e0f 307 Pfam PF02195 ParB-like nuclease domain 50 139 6.1E-28 T 19-04-2016 IPR003115 ParB/Sulfiredoxin APA12_RS13485 efec9d81a253fc8d574a5d6d35183e0f 307 SUPERFAMILY SSF110849 50 194 1.05E-34 T 19-04-2016 IPR003115 ParB/Sulfiredoxin APA12_RS13485 efec9d81a253fc8d574a5d6d35183e0f 307 Gene3D G3DSA:3.90.1530.10 46 146 1.8E-38 T 19-04-2016 APA12_RS13485 efec9d81a253fc8d574a5d6d35183e0f 307 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 49 214 7.2E-59 T 19-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 APA12_RS13485 efec9d81a253fc8d574a5d6d35183e0f 307 PANTHER PTHR33375 50 305 8.4E-93 T 19-04-2016 APA12_RS03270 9ac271dae4d914d553292a180bed6045 268 PANTHER PTHR12383:SF27 177 241 1.4E-69 T 19-04-2016 APA12_RS03270 9ac271dae4d914d553292a180bed6045 268 PANTHER PTHR12383:SF27 91 158 1.4E-69 T 19-04-2016 APA12_RS03270 9ac271dae4d914d553292a180bed6045 268 PANTHER PTHR12383:SF27 21 74 1.4E-69 T 19-04-2016 APA12_RS03270 9ac271dae4d914d553292a180bed6045 268 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 112 124 4.0E-23 T 19-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APA12_RS03270 9ac271dae4d914d553292a180bed6045 268 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 42 58 4.0E-23 T 19-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APA12_RS03270 9ac271dae4d914d553292a180bed6045 268 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 195 214 4.0E-23 T 19-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APA12_RS03270 9ac271dae4d914d553292a180bed6045 268 Pfam PF00717 Peptidase S24-like 49 135 3.9E-19 T 19-04-2016 IPR019759 Peptidase S24/S26A/S26B APA12_RS03270 9ac271dae4d914d553292a180bed6045 268 Gene3D G3DSA:2.10.109.10 195 252 2.4E-44 T 19-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain APA12_RS03270 9ac271dae4d914d553292a180bed6045 268 Gene3D G3DSA:2.10.109.10 38 122 2.4E-44 T 19-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain APA12_RS03270 9ac271dae4d914d553292a180bed6045 268 PANTHER PTHR12383 177 241 1.4E-69 T 19-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APA12_RS03270 9ac271dae4d914d553292a180bed6045 268 PANTHER PTHR12383 91 158 1.4E-69 T 19-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APA12_RS03270 9ac271dae4d914d553292a180bed6045 268 PANTHER PTHR12383 21 74 1.4E-69 T 19-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APA12_RS03270 9ac271dae4d914d553292a180bed6045 268 SUPERFAMILY SSF51306 40 265 4.71E-59 T 19-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C APA12_RS03270 9ac271dae4d914d553292a180bed6045 268 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 27 242 1.3E-44 T 19-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APA12_RS03270 9ac271dae4d914d553292a180bed6045 268 ProSitePatterns PS00760 Signal peptidases I lysine active site. 114 126 - T 19-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 APA12_RS03270 9ac271dae4d914d553292a180bed6045 268 ProSitePatterns PS00501 Signal peptidases I serine active site. 51 58 - T 19-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 APA12_RS06790 1aa14969e4971483c284d1b84b433da9 265 Pfam PF02311 AraC-like ligand binding domain 34 93 1.6E-7 T 19-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APA12_RS06790 1aa14969e4971483c284d1b84b433da9 265 Gene3D G3DSA:1.10.10.60 214 260 1.1E-10 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS06790 1aa14969e4971483c284d1b84b433da9 265 SUPERFAMILY SSF46689 213 262 1.39E-8 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS06790 1aa14969e4971483c284d1b84b433da9 265 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 243 259 7.8E-5 T 19-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APA12_RS06790 1aa14969e4971483c284d1b84b433da9 265 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 228 243 7.8E-5 T 19-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APA12_RS06790 1aa14969e4971483c284d1b84b433da9 265 Gene3D G3DSA:2.60.120.280 33 126 4.6E-9 T 19-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APA12_RS06790 1aa14969e4971483c284d1b84b433da9 265 SUPERFAMILY SSF51182 13 186 5.34E-12 T 19-04-2016 IPR011051 RmlC-like cupin domain APA12_RS06790 1aa14969e4971483c284d1b84b433da9 265 Pfam PF12833 Helix-turn-helix domain 183 261 1.7E-21 T 19-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APA12_RS06790 1aa14969e4971483c284d1b84b433da9 265 PANTHER PTHR11019:SF99 38 261 3.5E-43 T 19-04-2016 APA12_RS06790 1aa14969e4971483c284d1b84b433da9 265 Gene3D G3DSA:1.10.10.60 159 213 6.3E-9 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS06790 1aa14969e4971483c284d1b84b433da9 265 PANTHER PTHR11019 38 261 3.5E-43 T 19-04-2016 APA12_RS06790 1aa14969e4971483c284d1b84b433da9 265 SMART SM00342 177 259 3.2E-21 T 19-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APA12_RS00205 ec088f883bf659e59eeb54f9174b7a22 435 PANTHER PTHR13693:SF57 19 434 7.9E-192 T 19-04-2016 APA12_RS00205 ec088f883bf659e59eeb54f9174b7a22 435 TIGRFAM TIGR01821 5aminolev_synth: 5-aminolevulinic acid synthase 28 421 1.5E-163 T 19-04-2016 IPR010961 Tetrapyrrole biosynthesis, 5-aminolevulinic acid synthase GO:0003870|GO:0030170|GO:0033014 KEGG: 00260+2.3.1.37|KEGG: 00860+2.3.1.37|MetaCyc: PWY-5189|MetaCyc: PWY-7536|Reactome: REACT_9431|UniPathway: UPA00251 APA12_RS00205 ec088f883bf659e59eeb54f9174b7a22 435 PANTHER PTHR13693 19 434 7.9E-192 T 19-04-2016 APA12_RS00205 ec088f883bf659e59eeb54f9174b7a22 435 Gene3D G3DSA:3.40.640.10 88 304 3.3E-82 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APA12_RS00205 ec088f883bf659e59eeb54f9174b7a22 435 SUPERFAMILY SSF53383 23 420 5.15E-103 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APA12_RS00205 ec088f883bf659e59eeb54f9174b7a22 435 Pfam PF00155 Aminotransferase class I and II 70 415 4.3E-70 T 19-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APA12_RS00205 ec088f883bf659e59eeb54f9174b7a22 435 Gene3D G3DSA:3.90.1150.10 305 415 8.3E-23 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APA12_RS00205 ec088f883bf659e59eeb54f9174b7a22 435 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 269 278 - T 19-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 APA12_RS07500 4d952decaf01c785377fefd5286f2a71 217 Gene3D G3DSA:1.20.950.20 2 211 2.1E-64 T 19-04-2016 APA12_RS07500 4d952decaf01c785377fefd5286f2a71 217 Pfam PF01292 Prokaryotic cytochrome b561 14 186 3.1E-20 T 19-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 APA12_RS07500 4d952decaf01c785377fefd5286f2a71 217 PANTHER PTHR30074:SF5 1 206 1.8E-78 T 19-04-2016 APA12_RS07500 4d952decaf01c785377fefd5286f2a71 217 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 9 205 9.8E-58 T 19-04-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 APA12_RS07500 4d952decaf01c785377fefd5286f2a71 217 PANTHER PTHR30074 1 206 1.8E-78 T 19-04-2016 APA12_RS07500 4d952decaf01c785377fefd5286f2a71 217 SUPERFAMILY SSF81342 3 205 5.34E-49 T 19-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 APA12_RS05160 067912b1a0980ba67a8e7ac9d9432088 666 Gene3D G3DSA:3.30.565.10 329 357 8.3E-35 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS05160 067912b1a0980ba67a8e7ac9d9432088 666 Gene3D G3DSA:3.30.565.10 394 521 8.3E-35 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS05160 067912b1a0980ba67a8e7ac9d9432088 666 SMART SM00448 11 122 1.4E-19 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS05160 067912b1a0980ba67a8e7ac9d9432088 666 SMART SM00448 553 660 4.6E-21 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS05160 067912b1a0980ba67a8e7ac9d9432088 666 SMART SM00387 401 522 1.1E-24 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS05160 067912b1a0980ba67a8e7ac9d9432088 666 SUPERFAMILY SSF55785 128 232 7.61E-13 T 19-04-2016 IPR000014 PAS domain APA12_RS05160 067912b1a0980ba67a8e7ac9d9432088 666 Pfam PF00512 His Kinase A (phospho-acceptor) domain 277 339 8.1E-8 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS05160 067912b1a0980ba67a8e7ac9d9432088 666 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 402 520 1.7E-19 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS05160 067912b1a0980ba67a8e7ac9d9432088 666 PANTHER PTHR24423 380 665 5.9E-104 T 19-04-2016 APA12_RS05160 067912b1a0980ba67a8e7ac9d9432088 666 PANTHER PTHR24423 124 363 5.9E-104 T 19-04-2016 APA12_RS05160 067912b1a0980ba67a8e7ac9d9432088 666 PANTHER PTHR24423:SF438 380 665 5.9E-104 T 19-04-2016 APA12_RS05160 067912b1a0980ba67a8e7ac9d9432088 666 PANTHER PTHR24423:SF438 124 363 5.9E-104 T 19-04-2016 APA12_RS05160 067912b1a0980ba67a8e7ac9d9432088 666 Gene3D G3DSA:3.40.50.2300 551 665 3.1E-30 T 19-04-2016 APA12_RS05160 067912b1a0980ba67a8e7ac9d9432088 666 Pfam PF08448 PAS fold 146 234 1.1E-8 T 19-04-2016 IPR013656 PAS fold-4 APA12_RS05160 067912b1a0980ba67a8e7ac9d9432088 666 Gene3D G3DSA:3.40.50.2300 13 134 4.4E-25 T 19-04-2016 APA12_RS05160 067912b1a0980ba67a8e7ac9d9432088 666 SUPERFAMILY SSF47384 266 339 3.14E-10 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS05160 067912b1a0980ba67a8e7ac9d9432088 666 Pfam PF00072 Response regulator receiver domain 13 122 4.7E-13 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS05160 067912b1a0980ba67a8e7ac9d9432088 666 Pfam PF00072 Response regulator receiver domain 555 642 1.7E-17 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS05160 067912b1a0980ba67a8e7ac9d9432088 666 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 141 235 4.2E-6 T 19-04-2016 IPR000014 PAS domain APA12_RS05160 067912b1a0980ba67a8e7ac9d9432088 666 PRINTS PR00344 Bacterial sensor protein C-terminal signature 482 500 6.3E-15 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS05160 067912b1a0980ba67a8e7ac9d9432088 666 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 465 6.3E-15 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS05160 067912b1a0980ba67a8e7ac9d9432088 666 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 479 6.3E-15 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS05160 067912b1a0980ba67a8e7ac9d9432088 666 PRINTS PR00344 Bacterial sensor protein C-terminal signature 506 519 6.3E-15 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS05160 067912b1a0980ba67a8e7ac9d9432088 666 Gene3D G3DSA:1.10.287.130 268 328 6.5E-6 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS05160 067912b1a0980ba67a8e7ac9d9432088 666 SUPERFAMILY SSF55874 365 520 4.06E-34 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS05160 067912b1a0980ba67a8e7ac9d9432088 666 SUPERFAMILY SSF52172 552 664 9.39E-29 T 19-04-2016 IPR011006 CheY-like superfamily APA12_RS05160 067912b1a0980ba67a8e7ac9d9432088 666 Gene3D G3DSA:3.30.450.20 135 259 1.4E-13 T 19-04-2016 APA12_RS05160 067912b1a0980ba67a8e7ac9d9432088 666 SMART SM00388 275 342 3.3E-8 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS05160 067912b1a0980ba67a8e7ac9d9432088 666 SMART SM00091 140 206 2.4E-4 T 19-04-2016 IPR000014 PAS domain APA12_RS05160 067912b1a0980ba67a8e7ac9d9432088 666 SUPERFAMILY SSF52172 11 147 2.7E-26 T 19-04-2016 IPR011006 CheY-like superfamily APA12_RS08320 810f0b6c63a1e761cc8d37168572ffbd 121 PANTHER PTHR11058 1 121 2.8E-55 T 19-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 APA12_RS08320 810f0b6c63a1e761cc8d37168572ffbd 121 PANTHER PTHR11058:SF10 1 121 2.8E-55 T 19-04-2016 APA12_RS08320 810f0b6c63a1e761cc8d37168572ffbd 121 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 4 121 19.161 T 19-04-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 APA12_RS08320 810f0b6c63a1e761cc8d37168572ffbd 121 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 24 120 1.6E-37 T 19-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 APA12_RS08270 c5a373521ca61089ec90bff7cbe2052f 107 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 8 107 18.6 T 19-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 APA12_RS08270 c5a373521ca61089ec90bff7cbe2052f 107 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 13 102 3.0E-23 T 19-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 APA12_RS08270 c5a373521ca61089ec90bff7cbe2052f 107 PANTHER PTHR11434 10 107 2.4E-36 T 19-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 APA12_RS09930 d20fbb276e157b4aaff198bdc9af4600 303 SUPERFAMILY SSF52374 16 293 3.49E-73 T 19-04-2016 APA12_RS09930 d20fbb276e157b4aaff198bdc9af4600 303 Gene3D G3DSA:3.90.800.10 79 207 1.5E-18 T 19-04-2016 APA12_RS09930 d20fbb276e157b4aaff198bdc9af4600 303 PANTHER PTHR11451:SF35 7 292 3.5E-41 T 19-04-2016 APA12_RS09930 d20fbb276e157b4aaff198bdc9af4600 303 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 21 32 - T 19-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS09930 d20fbb276e157b4aaff198bdc9af4600 303 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 16 282 4.3E-44 T 19-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 APA12_RS09930 d20fbb276e157b4aaff198bdc9af4600 303 Gene3D G3DSA:3.40.50.620 212 261 1.4E-33 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS09930 d20fbb276e157b4aaff198bdc9af4600 303 Gene3D G3DSA:3.40.50.620 16 78 1.4E-33 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS09930 d20fbb276e157b4aaff198bdc9af4600 303 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 8.3E-11 T 19-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APA12_RS09930 d20fbb276e157b4aaff198bdc9af4600 303 PRINTS PR00987 Glutamyl-tRNA synthetase signature 46 59 8.3E-11 T 19-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APA12_RS09930 d20fbb276e157b4aaff198bdc9af4600 303 PRINTS PR00987 Glutamyl-tRNA synthetase signature 226 234 8.3E-11 T 19-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APA12_RS09930 d20fbb276e157b4aaff198bdc9af4600 303 PRINTS PR00987 Glutamyl-tRNA synthetase signature 18 30 8.3E-11 T 19-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APA12_RS09930 d20fbb276e157b4aaff198bdc9af4600 303 PANTHER PTHR11451 7 292 3.5E-41 T 19-04-2016 APA12_RS04525 7e9fe27bda47073cc4109752744b237f 193 PANTHER PTHR10681:SF107 1 191 7.6E-34 T 19-04-2016 APA12_RS04525 7e9fe27bda47073cc4109752744b237f 193 SUPERFAMILY SSF52833 49 190 1.04E-29 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS04525 7e9fe27bda47073cc4109752744b237f 193 PANTHER PTHR10681 1 191 7.6E-34 T 19-04-2016 APA12_RS04525 7e9fe27bda47073cc4109752744b237f 193 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 27 189 1.3E-38 T 19-04-2016 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 APA12_RS04525 7e9fe27bda47073cc4109752744b237f 193 Gene3D G3DSA:3.40.30.10 15 190 5.1E-32 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS04525 7e9fe27bda47073cc4109752744b237f 193 Pfam PF00578 AhpC/TSA family 54 168 3.9E-12 T 19-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 APA12_RS03645 5cd529a5b1fd394d0db98887b86cada4 284 PANTHER PTHR11732 1 272 3.4E-103 T 19-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APA12_RS03645 5cd529a5b1fd394d0db98887b86cada4 284 SUPERFAMILY SSF51430 1 274 1.18E-76 T 19-04-2016 IPR023210 NADP-dependent oxidoreductase domain APA12_RS03645 5cd529a5b1fd394d0db98887b86cada4 284 PRINTS PR00069 Aldo-keto reductase signature 96 114 9.6E-14 T 19-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APA12_RS03645 5cd529a5b1fd394d0db98887b86cada4 284 PRINTS PR00069 Aldo-keto reductase signature 201 225 9.6E-14 T 19-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APA12_RS03645 5cd529a5b1fd394d0db98887b86cada4 284 PRINTS PR00069 Aldo-keto reductase signature 40 64 9.6E-14 T 19-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APA12_RS03645 5cd529a5b1fd394d0db98887b86cada4 284 PRINTS PR00069 Aldo-keto reductase signature 126 143 9.6E-14 T 19-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APA12_RS03645 5cd529a5b1fd394d0db98887b86cada4 284 Pfam PF00248 Aldo/keto reductase family 16 270 3.2E-52 T 19-04-2016 IPR023210 NADP-dependent oxidoreductase domain APA12_RS03645 5cd529a5b1fd394d0db98887b86cada4 284 Gene3D G3DSA:3.20.20.100 1 273 9.4E-75 T 19-04-2016 IPR023210 NADP-dependent oxidoreductase domain APA12_RS05860 a43130596aed3eddad31b6b30615b1c4 222 Gene3D G3DSA:3.40.50.620 11 192 3.3E-41 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS05860 a43130596aed3eddad31b6b30615b1c4 222 PANTHER PTHR23293:SF5 1 220 8.3E-57 T 19-04-2016 APA12_RS05860 a43130596aed3eddad31b6b30615b1c4 222 PIRSF PIRSF000857 4 222 1.1E-69 T 19-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 APA12_RS05860 a43130596aed3eddad31b6b30615b1c4 222 SUPERFAMILY SSF52402 10 184 9.63E-39 T 19-04-2016 APA12_RS05860 a43130596aed3eddad31b6b30615b1c4 222 PANTHER PTHR23293 1 220 8.3E-57 T 19-04-2016 APA12_RS05860 a43130596aed3eddad31b6b30615b1c4 222 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 27 196 8.5E-35 T 19-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 APA12_RS09375 20ca822ac1f636db0887e4893fa16cc8 419 SUPERFAMILY SSF51905 126 269 2.45E-19 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS09375 20ca822ac1f636db0887e4893fa16cc8 419 Gene3D G3DSA:3.50.50.60 13 127 8.6E-46 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS09375 20ca822ac1f636db0887e4893fa16cc8 419 Gene3D G3DSA:3.50.50.60 270 339 8.6E-46 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS09375 20ca822ac1f636db0887e4893fa16cc8 419 PANTHER PTHR10632:SF2 14 406 2.6E-177 T 19-04-2016 APA12_RS09375 20ca822ac1f636db0887e4893fa16cc8 419 PANTHER PTHR10632 14 406 2.6E-177 T 19-04-2016 APA12_RS09375 20ca822ac1f636db0887e4893fa16cc8 419 SUPERFAMILY SSF51905 14 154 3.51E-24 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS09375 20ca822ac1f636db0887e4893fa16cc8 419 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 14 130 2.2E-8 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS13250 4a807e32cec23b6cdd83097be5304a2c 344 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 82 339 1.3E-88 T 19-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 APA12_RS13250 4a807e32cec23b6cdd83097be5304a2c 344 PANTHER PTHR20941 81 344 1.1E-105 T 19-04-2016 APA12_RS13250 4a807e32cec23b6cdd83097be5304a2c 344 Gene3D G3DSA:3.20.20.20 80 343 6.3E-99 T 19-04-2016 IPR000489 Pterin-binding domain GO:0042558 APA12_RS13250 4a807e32cec23b6cdd83097be5304a2c 344 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 83 98 - T 19-04-2016 IPR000489 Pterin-binding domain GO:0042558 APA12_RS13250 4a807e32cec23b6cdd83097be5304a2c 344 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 117 130 - T 19-04-2016 IPR000489 Pterin-binding domain GO:0042558 APA12_RS13250 4a807e32cec23b6cdd83097be5304a2c 344 PANTHER PTHR20941:SF1 81 344 1.1E-105 T 19-04-2016 APA12_RS13250 4a807e32cec23b6cdd83097be5304a2c 344 Pfam PF00809 Pterin binding enzyme 84 326 9.3E-77 T 19-04-2016 IPR000489 Pterin-binding domain GO:0042558 APA12_RS13250 4a807e32cec23b6cdd83097be5304a2c 344 SUPERFAMILY SSF51717 76 343 1.14E-91 T 19-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 APA12_RS11500 b89e6cbf0144db2bfef18d77aad30587 365 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 7 361 37.038 T 19-04-2016 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 APA12_RS11500 b89e6cbf0144db2bfef18d77aad30587 365 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 19 350 4.1E-129 T 19-04-2016 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 APA12_RS11500 b89e6cbf0144db2bfef18d77aad30587 365 Pfam PF01008 Initiation factor 2 subunit family 52 351 1.4E-63 T 19-04-2016 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 APA12_RS11500 b89e6cbf0144db2bfef18d77aad30587 365 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 39 349 2.2E-97 T 19-04-2016 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 APA12_RS11500 b89e6cbf0144db2bfef18d77aad30587 365 Gene3D G3DSA:3.40.50.10470 165 354 3.2E-63 T 19-04-2016 APA12_RS11500 b89e6cbf0144db2bfef18d77aad30587 365 SUPERFAMILY SSF100950 5 353 2.72E-114 T 19-04-2016 APA12_RS11500 b89e6cbf0144db2bfef18d77aad30587 365 Gene3D G3DSA:1.20.120.420 9 164 6.7E-46 T 19-04-2016 IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal domain KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 APA12_RS11500 b89e6cbf0144db2bfef18d77aad30587 365 PANTHER PTHR10233:SF6 17 348 1.9E-133 T 19-04-2016 APA12_RS11500 b89e6cbf0144db2bfef18d77aad30587 365 PANTHER PTHR10233 17 348 1.9E-133 T 19-04-2016 APA12_RS03520 2b3e5a8c3f48ef90cc1c735611a43ea4 463 Gene3D G3DSA:3.30.230.10 285 456 1.3E-27 T 19-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APA12_RS03520 2b3e5a8c3f48ef90cc1c735611a43ea4 463 SUPERFAMILY SSF54211 303 457 1.82E-34 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APA12_RS03520 2b3e5a8c3f48ef90cc1c735611a43ea4 463 SUPERFAMILY SSF54211 255 269 1.82E-34 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APA12_RS03520 2b3e5a8c3f48ef90cc1c735611a43ea4 463 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 454 5.1E-166 T 19-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 APA12_RS03520 2b3e5a8c3f48ef90cc1c735611a43ea4 463 Gene3D G3DSA:3.40.50.300 70 277 8.5E-51 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS03520 2b3e5a8c3f48ef90cc1c735611a43ea4 463 Pfam PF13481 AAA domain 76 222 6.6E-15 T 19-04-2016 APA12_RS03520 2b3e5a8c3f48ef90cc1c735611a43ea4 463 Pfam PF13541 Subunit ChlI of Mg-chelatase 347 429 3.4E-7 T 19-04-2016 APA12_RS03520 2b3e5a8c3f48ef90cc1c735611a43ea4 463 SMART SM00382 89 244 9.8E-7 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS03520 2b3e5a8c3f48ef90cc1c735611a43ea4 463 PRINTS PR01874 DNA repair protein radA signature 11 35 1.8E-89 T 19-04-2016 APA12_RS03520 2b3e5a8c3f48ef90cc1c735611a43ea4 463 PRINTS PR01874 DNA repair protein radA signature 174 198 1.8E-89 T 19-04-2016 APA12_RS03520 2b3e5a8c3f48ef90cc1c735611a43ea4 463 PRINTS PR01874 DNA repair protein radA signature 81 109 1.8E-89 T 19-04-2016 APA12_RS03520 2b3e5a8c3f48ef90cc1c735611a43ea4 463 PRINTS PR01874 DNA repair protein radA signature 248 274 1.8E-89 T 19-04-2016 APA12_RS03520 2b3e5a8c3f48ef90cc1c735611a43ea4 463 PRINTS PR01874 DNA repair protein radA signature 213 241 1.8E-89 T 19-04-2016 APA12_RS03520 2b3e5a8c3f48ef90cc1c735611a43ea4 463 PRINTS PR01874 DNA repair protein radA signature 123 140 1.8E-89 T 19-04-2016 APA12_RS03520 2b3e5a8c3f48ef90cc1c735611a43ea4 463 PRINTS PR01874 DNA repair protein radA signature 323 346 1.8E-89 T 19-04-2016 APA12_RS03520 2b3e5a8c3f48ef90cc1c735611a43ea4 463 PANTHER PTHR32472 4 429 4.2E-181 T 19-04-2016 APA12_RS03520 2b3e5a8c3f48ef90cc1c735611a43ea4 463 SUPERFAMILY SSF52540 70 289 1.18E-47 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05395 191d2e5766c3de7043f65f45b3371c3b 174 SMART SM00855 3 121 6.7E-10 T 19-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APA12_RS05395 191d2e5766c3de7043f65f45b3371c3b 174 Gene3D G3DSA:3.40.50.1240 1 174 4.7E-47 T 19-04-2016 IPR029033 Histidine phosphatase superfamily APA12_RS05395 191d2e5766c3de7043f65f45b3371c3b 174 PANTHER PTHR23029:SF49 1 67 1.2E-14 T 19-04-2016 APA12_RS05395 191d2e5766c3de7043f65f45b3371c3b 174 PANTHER PTHR23029 1 67 1.2E-14 T 19-04-2016 APA12_RS05395 191d2e5766c3de7043f65f45b3371c3b 174 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 75 6.0E-10 T 19-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APA12_RS05395 191d2e5766c3de7043f65f45b3371c3b 174 SUPERFAMILY SSF53254 1 148 1.57E-24 T 19-04-2016 IPR029033 Histidine phosphatase superfamily APA12_RS08800 619ca9f16e3b80c1bf92959d5e3641dc 395 PANTHER PTHR30372:SF3 10 354 1.0E-99 T 19-04-2016 APA12_RS08800 619ca9f16e3b80c1bf92959d5e3641dc 395 SUPERFAMILY SSF53756 10 308 4.32E-29 T 19-04-2016 APA12_RS08800 619ca9f16e3b80c1bf92959d5e3641dc 395 PANTHER PTHR30372 10 354 1.0E-99 T 19-04-2016 APA12_RS08800 619ca9f16e3b80c1bf92959d5e3641dc 395 Gene3D G3DSA:3.40.50.2000 161 357 3.0E-16 T 19-04-2016 APA12_RS08800 619ca9f16e3b80c1bf92959d5e3641dc 395 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 7 382 34.064 T 19-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 APA12_RS08800 619ca9f16e3b80c1bf92959d5e3641dc 395 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 12 383 1.3E-87 T 19-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 APA12_RS08800 619ca9f16e3b80c1bf92959d5e3641dc 395 Pfam PF02684 Lipid-A-disaccharide synthetase 11 365 8.4E-100 T 19-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 APA12_RS06215 dbbad1cd1092a4a08dcae0337b7f3c26 374 Gene3D G3DSA:3.10.150.10 255 374 6.5E-33 T 19-04-2016 APA12_RS06215 dbbad1cd1092a4a08dcae0337b7f3c26 374 Pfam PF02767 DNA polymerase III beta subunit, central domain 131 249 1.3E-31 T 19-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APA12_RS06215 dbbad1cd1092a4a08dcae0337b7f3c26 374 SUPERFAMILY SSF55979 1 118 3.36E-22 T 19-04-2016 APA12_RS06215 dbbad1cd1092a4a08dcae0337b7f3c26 374 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 373 6.6E-83 T 19-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APA12_RS06215 dbbad1cd1092a4a08dcae0337b7f3c26 374 PANTHER PTHR30478 2 374 2.9E-117 T 19-04-2016 APA12_RS06215 dbbad1cd1092a4a08dcae0337b7f3c26 374 SUPERFAMILY SSF55979 251 374 3.93E-30 T 19-04-2016 APA12_RS06215 dbbad1cd1092a4a08dcae0337b7f3c26 374 SMART SM00480 17 370 9.3E-116 T 19-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APA12_RS06215 dbbad1cd1092a4a08dcae0337b7f3c26 374 Gene3D G3DSA:3.10.150.10 1 119 1.4E-25 T 19-04-2016 APA12_RS06215 dbbad1cd1092a4a08dcae0337b7f3c26 374 Gene3D G3DSA:3.10.150.10 127 254 5.6E-36 T 19-04-2016 APA12_RS06215 dbbad1cd1092a4a08dcae0337b7f3c26 374 PIRSF PIRSF000804 1 374 6.2E-109 T 19-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APA12_RS06215 dbbad1cd1092a4a08dcae0337b7f3c26 374 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 252 373 2.3E-27 T 19-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APA12_RS06215 dbbad1cd1092a4a08dcae0337b7f3c26 374 SUPERFAMILY SSF55979 127 250 4.49E-25 T 19-04-2016 APA12_RS06215 dbbad1cd1092a4a08dcae0337b7f3c26 374 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 120 1.5E-28 T 19-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APA12_RS03560 a51d4af430394b993bfc8856d27f8b4e 237 Gene3D G3DSA:1.20.120.530 84 226 5.2E-33 T 19-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APA12_RS03560 a51d4af430394b993bfc8856d27f8b4e 237 SUPERFAMILY SSF48008 86 220 8.63E-22 T 19-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APA12_RS03560 a51d4af430394b993bfc8856d27f8b4e 237 Gene3D G3DSA:1.10.10.10 9 80 9.1E-23 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS03560 a51d4af430394b993bfc8856d27f8b4e 237 SMART SM00895 90 215 1.4E-12 T 19-04-2016 IPR011711 GntR, C-terminal APA12_RS03560 a51d4af430394b993bfc8856d27f8b4e 237 PANTHER PTHR11751:SF436 11 106 2.9E-26 T 19-04-2016 APA12_RS03560 a51d4af430394b993bfc8856d27f8b4e 237 SUPERFAMILY SSF46785 13 84 2.23E-19 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS03560 a51d4af430394b993bfc8856d27f8b4e 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 80 1.5E-16 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APA12_RS03560 a51d4af430394b993bfc8856d27f8b4e 237 SMART SM00345 22 80 5.6E-16 T 19-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APA12_RS03560 a51d4af430394b993bfc8856d27f8b4e 237 PANTHER PTHR11751 11 106 2.9E-26 T 19-04-2016 APA12_RS03560 a51d4af430394b993bfc8856d27f8b4e 237 Pfam PF07729 FCD domain 93 214 6.8E-22 T 19-04-2016 IPR011711 GntR, C-terminal APA12_RS12470 dbb4d9cf1daa9b9eea622de8abd75064 489 Pfam PF04403 Paraquat-inducible protein A 75 226 1.0E-33 T 19-04-2016 IPR007498 Paraquat-inducible protein A APA12_RS12470 dbb4d9cf1daa9b9eea622de8abd75064 489 Pfam PF04403 Paraquat-inducible protein A 301 455 2.3E-49 T 19-04-2016 IPR007498 Paraquat-inducible protein A APA12_RS12470 dbb4d9cf1daa9b9eea622de8abd75064 489 PANTHER PTHR30462:SF3 34 470 1.2E-57 T 19-04-2016 APA12_RS12470 dbb4d9cf1daa9b9eea622de8abd75064 489 PANTHER PTHR30462 34 470 1.2E-57 T 19-04-2016 APA12_RS05810 390c957dd10656cd33a3fad523b28310 212 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 33 119 9.2E-29 T 19-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APA12_RS05810 390c957dd10656cd33a3fad523b28310 212 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 172 212 8.6E-16 T 19-04-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APA12_RS05810 390c957dd10656cd33a3fad523b28310 212 PANTHER PTHR10851:SF0 20 212 3.1E-93 T 19-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APA12_RS05810 390c957dd10656cd33a3fad523b28310 212 Gene3D G3DSA:2.30.110.10 20 212 2.7E-81 T 19-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APA12_RS05810 390c957dd10656cd33a3fad523b28310 212 PIRSF PIRSF000190 13 212 2.6E-74 T 19-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APA12_RS05810 390c957dd10656cd33a3fad523b28310 212 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 20 212 4.3E-73 T 19-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APA12_RS05810 390c957dd10656cd33a3fad523b28310 212 SUPERFAMILY SSF50475 18 212 1.88E-66 T 19-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APA12_RS05810 390c957dd10656cd33a3fad523b28310 212 PANTHER PTHR10851 20 212 3.1E-93 T 19-04-2016 APA12_RS05810 390c957dd10656cd33a3fad523b28310 212 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 5 212 37.771 T 19-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APA12_RS05810 390c957dd10656cd33a3fad523b28310 212 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 182 195 - T 19-04-2016 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APA12_RS08485 583acbf0b054b2b97fb27d77ba3ef377 627 Gene3D G3DSA:1.25.40.10 241 338 2.0E-13 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS08485 583acbf0b054b2b97fb27d77ba3ef377 627 PANTHER PTHR23083 1 343 5.0E-47 T 19-04-2016 APA12_RS08485 583acbf0b054b2b97fb27d77ba3ef377 627 Gene3D G3DSA:1.25.40.10 6 240 1.2E-37 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS08485 583acbf0b054b2b97fb27d77ba3ef377 627 SUPERFAMILY SSF48452 6 71 2.87E-6 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS08485 583acbf0b054b2b97fb27d77ba3ef377 627 SMART SM00028 314 347 290.0 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APA12_RS08485 583acbf0b054b2b97fb27d77ba3ef377 627 SMART SM00028 209 242 160.0 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APA12_RS08485 583acbf0b054b2b97fb27d77ba3ef377 627 SMART SM00028 141 174 160.0 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APA12_RS08485 583acbf0b054b2b97fb27d77ba3ef377 627 SMART SM00028 107 140 14.0 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APA12_RS08485 583acbf0b054b2b97fb27d77ba3ef377 627 SMART SM00028 6 39 67.0 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APA12_RS08485 583acbf0b054b2b97fb27d77ba3ef377 627 SMART SM00028 40 73 140.0 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APA12_RS08485 583acbf0b054b2b97fb27d77ba3ef377 627 SMART SM00028 175 208 410.0 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APA12_RS08485 583acbf0b054b2b97fb27d77ba3ef377 627 SMART SM00028 243 276 0.066 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APA12_RS08485 583acbf0b054b2b97fb27d77ba3ef377 627 SMART SM00028 277 310 180.0 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APA12_RS08485 583acbf0b054b2b97fb27d77ba3ef377 627 Pfam PF07721 Tetratricopeptide repeat 73 95 0.087 T 19-04-2016 IPR011717 Tetratricopeptide TPR-4 GO:0042802 UniPathway: UPA00694 APA12_RS08485 583acbf0b054b2b97fb27d77ba3ef377 627 Pfam PF07721 Tetratricopeptide repeat 244 267 0.35 T 19-04-2016 IPR011717 Tetratricopeptide TPR-4 GO:0042802 UniPathway: UPA00694 APA12_RS08485 583acbf0b054b2b97fb27d77ba3ef377 627 Pfam PF13432 Tetratricopeptide repeat 284 338 0.0017 T 19-04-2016 APA12_RS08485 583acbf0b054b2b97fb27d77ba3ef377 627 Pfam PF13432 Tetratricopeptide repeat 113 162 0.0048 T 19-04-2016 APA12_RS08485 583acbf0b054b2b97fb27d77ba3ef377 627 Gene3D G3DSA:3.40.50.2000 514 573 2.4E-8 T 19-04-2016 APA12_RS08485 583acbf0b054b2b97fb27d77ba3ef377 627 SUPERFAMILY SSF53756 365 595 2.86E-10 T 19-04-2016 APA12_RS08485 583acbf0b054b2b97fb27d77ba3ef377 627 SUPERFAMILY SSF48452 77 332 2.18E-24 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS04070 1189365aab3cba1a63d03eb883508ecb 263 PANTHER PTHR10266:SF3 15 261 2.7E-62 T 19-04-2016 APA12_RS04070 1189365aab3cba1a63d03eb883508ecb 263 PANTHER PTHR10266 15 261 2.7E-62 T 19-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 APA12_RS04070 1189365aab3cba1a63d03eb883508ecb 263 Gene3D G3DSA:1.20.5.100 228 262 9.8E-6 T 19-04-2016 APA12_RS04070 1189365aab3cba1a63d03eb883508ecb 263 SUPERFAMILY SSF46626 38 225 4.69E-47 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS04070 1189365aab3cba1a63d03eb883508ecb 263 Gene3D G3DSA:1.10.760.10 38 227 3.0E-60 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS04070 1189365aab3cba1a63d03eb883508ecb 263 Pfam PF02167 Cytochrome C1 family 45 260 1.3E-66 T 19-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 APA12_RS04070 1189365aab3cba1a63d03eb883508ecb 263 PRINTS PR00603 Cytochrome C1 signature 141 165 3.9E-38 T 19-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 APA12_RS04070 1189365aab3cba1a63d03eb883508ecb 263 PRINTS PR00603 Cytochrome C1 signature 227 242 3.9E-38 T 19-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 APA12_RS04070 1189365aab3cba1a63d03eb883508ecb 263 PRINTS PR00603 Cytochrome C1 signature 208 227 3.9E-38 T 19-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 APA12_RS04070 1189365aab3cba1a63d03eb883508ecb 263 PRINTS PR00603 Cytochrome C1 signature 108 128 3.9E-38 T 19-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 APA12_RS04070 1189365aab3cba1a63d03eb883508ecb 263 PRINTS PR00603 Cytochrome C1 signature 43 62 3.9E-38 T 19-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 APA12_RS04070 1189365aab3cba1a63d03eb883508ecb 263 PRINTS PR00603 Cytochrome C1 signature 188 207 3.9E-38 T 19-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 APA12_RS04070 1189365aab3cba1a63d03eb883508ecb 263 PRINTS PR00603 Cytochrome C1 signature 63 82 3.9E-38 T 19-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 APA12_RS03510 e2ef9c01835c21d2c241b9c7234c5886 261 PANTHER PTHR30188:SF4 3 259 2.6E-87 T 19-04-2016 APA12_RS03510 e2ef9c01835c21d2c241b9c7234c5886 261 Pfam PF02405 Permease MlaE 47 255 2.0E-73 T 19-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 APA12_RS03510 e2ef9c01835c21d2c241b9c7234c5886 261 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 31 259 7.5E-71 T 19-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria APA12_RS03510 e2ef9c01835c21d2c241b9c7234c5886 261 PANTHER PTHR30188 3 259 2.6E-87 T 19-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 APA12_RS01640 d55e7ffa2eaf6db9d350f31ba729a34b 326 PANTHER PTHR11695:SF13 16 325 2.6E-147 T 19-04-2016 IPR014188 Acrylyl-CoA reductase AcuI APA12_RS01640 d55e7ffa2eaf6db9d350f31ba729a34b 326 SMART SM00829 13 323 1.6E-5 T 19-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APA12_RS01640 d55e7ffa2eaf6db9d350f31ba729a34b 326 PANTHER PTHR11695 16 325 2.6E-147 T 19-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APA12_RS01640 d55e7ffa2eaf6db9d350f31ba729a34b 326 SUPERFAMILY SSF50129 2 144 1.83E-38 T 19-04-2016 IPR011032 GroES-like APA12_RS01640 d55e7ffa2eaf6db9d350f31ba729a34b 326 Gene3D G3DSA:3.90.180.10 3 87 8.0E-7 T 19-04-2016 IPR011032 GroES-like APA12_RS01640 d55e7ffa2eaf6db9d350f31ba729a34b 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 87 2.7E-5 T 19-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APA12_RS01640 d55e7ffa2eaf6db9d350f31ba729a34b 326 Gene3D G3DSA:3.40.50.720 126 292 2.0E-76 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS01640 d55e7ffa2eaf6db9d350f31ba729a34b 326 Pfam PF00107 Zinc-binding dehydrogenase 159 285 7.2E-13 T 19-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APA12_RS01640 d55e7ffa2eaf6db9d350f31ba729a34b 326 SUPERFAMILY SSF51735 117 291 1.45E-36 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS01640 d55e7ffa2eaf6db9d350f31ba729a34b 326 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 3 325 2.8E-134 T 19-04-2016 IPR014188 Acrylyl-CoA reductase AcuI APA12_RS01010 b7d49151a795da2d89b29519f0ed3b86 363 TIGRFAM TIGR03476 HpnL: putative membrane protein 11 333 1.9E-89 T 19-04-2016 APA12_RS01010 b7d49151a795da2d89b29519f0ed3b86 363 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 19 323 4.8E-24 T 19-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD APA12_RS12060 c037f6eca56357d3b816c73a55584a50 210 PANTHER PTHR11080 2 208 1.9E-46 T 19-04-2016 APA12_RS12060 c037f6eca56357d3b816c73a55584a50 210 Gene3D G3DSA:3.40.50.850 29 209 1.2E-51 T 19-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APA12_RS12060 c037f6eca56357d3b816c73a55584a50 210 SUPERFAMILY SSF52499 26 207 2.09E-49 T 19-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APA12_RS12060 c037f6eca56357d3b816c73a55584a50 210 PANTHER PTHR11080:SF38 2 208 1.9E-46 T 19-04-2016 APA12_RS12060 c037f6eca56357d3b816c73a55584a50 210 Pfam PF00857 Isochorismatase family 29 200 4.7E-41 T 19-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APA12_RS05690 c5e50710b0a10d8be35b924fe8a39150 417 SUPERFAMILY SSF55021 341 415 1.69E-21 T 19-04-2016 APA12_RS05690 c5e50710b0a10d8be35b924fe8a39150 417 PANTHER PTHR21499:SF27 8 416 8.8E-150 T 19-04-2016 APA12_RS05690 c5e50710b0a10d8be35b924fe8a39150 417 SUPERFAMILY SSF53633 7 255 4.97E-71 T 19-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APA12_RS05690 c5e50710b0a10d8be35b924fe8a39150 417 SUPERFAMILY SSF55021 259 337 4.1E-19 T 19-04-2016 APA12_RS05690 c5e50710b0a10d8be35b924fe8a39150 417 Pfam PF00696 Amino acid kinase family 7 233 2.5E-47 T 19-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APA12_RS05690 c5e50710b0a10d8be35b924fe8a39150 417 Pfam PF01842 ACT domain 280 337 2.1E-12 T 19-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 APA12_RS05690 c5e50710b0a10d8be35b924fe8a39150 417 Gene3D G3DSA:3.30.70.260 282 337 1.5E-5 T 19-04-2016 APA12_RS05690 c5e50710b0a10d8be35b924fe8a39150 417 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 8 413 1.4E-128 T 19-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APA12_RS05690 c5e50710b0a10d8be35b924fe8a39150 417 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 67 412 5.4E-114 T 19-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APA12_RS05690 c5e50710b0a10d8be35b924fe8a39150 417 Gene3D G3DSA:3.40.1160.10 5 258 9.2E-73 T 19-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APA12_RS05690 c5e50710b0a10d8be35b924fe8a39150 417 PANTHER PTHR21499 8 416 8.8E-150 T 19-04-2016 APA12_RS05690 c5e50710b0a10d8be35b924fe8a39150 417 ProSitePatterns PS00324 Aspartokinase signature. 9 17 - T 19-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APA12_RS05690 c5e50710b0a10d8be35b924fe8a39150 417 PIRSF PIRSF000726 62 417 3.1E-124 T 19-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APA12_RS05690 c5e50710b0a10d8be35b924fe8a39150 417 Pfam PF13840 ACT domain 347 409 6.8E-14 T 19-04-2016 IPR027795 GATS-like ACT domain APA12_RS01665 96606d5c42730ed5d7eb82ac389dd9af 243 Gene3D G3DSA:3.40.50.720 1 241 7.1E-72 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS01665 96606d5c42730ed5d7eb82ac389dd9af 243 SUPERFAMILY SSF51735 3 241 2.34E-71 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS01665 96606d5c42730ed5d7eb82ac389dd9af 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 3.8E-7 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS01665 96606d5c42730ed5d7eb82ac389dd9af 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 3.8E-7 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS01665 96606d5c42730ed5d7eb82ac389dd9af 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 3.8E-7 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS01665 96606d5c42730ed5d7eb82ac389dd9af 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 3.8E-53 T 19-04-2016 APA12_RS01665 96606d5c42730ed5d7eb82ac389dd9af 243 PANTHER PTHR24322:SF378 8 135 2.6E-44 T 19-04-2016 APA12_RS01665 96606d5c42730ed5d7eb82ac389dd9af 243 PANTHER PTHR24322:SF378 152 184 2.6E-44 T 19-04-2016 APA12_RS01665 96606d5c42730ed5d7eb82ac389dd9af 243 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 19-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APA12_RS01665 96606d5c42730ed5d7eb82ac389dd9af 243 PANTHER PTHR24322 8 135 2.6E-44 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS01665 96606d5c42730ed5d7eb82ac389dd9af 243 PANTHER PTHR24322 152 184 2.6E-44 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS01665 96606d5c42730ed5d7eb82ac389dd9af 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.1E-34 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS01665 96606d5c42730ed5d7eb82ac389dd9af 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.1E-34 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS01665 96606d5c42730ed5d7eb82ac389dd9af 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 3.1E-34 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS01665 96606d5c42730ed5d7eb82ac389dd9af 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 3.1E-34 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS01665 96606d5c42730ed5d7eb82ac389dd9af 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.1E-34 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS01665 96606d5c42730ed5d7eb82ac389dd9af 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 3.1E-34 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS01665 96606d5c42730ed5d7eb82ac389dd9af 243 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 183 9.4E-4 T 19-04-2016 APA12_RS04305 1a93d2740a9ab93888b1dc2d18c95414 112 Pfam PF00249 Myb-like DNA-binding domain 5 44 8.4E-6 T 19-04-2016 IPR001005 SANT/Myb domain APA12_RS04305 1a93d2740a9ab93888b1dc2d18c95414 112 SUPERFAMILY SSF46689 6 51 6.35E-6 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS04305 1a93d2740a9ab93888b1dc2d18c95414 112 SMART SM00717 4 50 5.5E-4 T 19-04-2016 IPR001005 SANT/Myb domain APA12_RS04305 1a93d2740a9ab93888b1dc2d18c95414 112 Gene3D G3DSA:1.10.10.60 5 51 1.1E-6 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS00540 ebdff4331dcbcfa8a1759b853f99b8ab 298 PANTHER PTHR19370 49 283 4.0E-106 T 19-04-2016 APA12_RS00540 ebdff4331dcbcfa8a1759b853f99b8ab 298 SUPERFAMILY SSF52343 144 295 7.07E-37 T 19-04-2016 APA12_RS00540 ebdff4331dcbcfa8a1759b853f99b8ab 298 Pfam PF00970 Oxidoreductase FAD-binding domain 59 132 9.8E-8 T 19-04-2016 IPR008333 Oxidoreductase, FAD-binding domain APA12_RS00540 ebdff4331dcbcfa8a1759b853f99b8ab 298 Pfam PF00175 Oxidoreductase NAD-binding domain 153 269 3.9E-5 T 19-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 APA12_RS00540 ebdff4331dcbcfa8a1759b853f99b8ab 298 Gene3D G3DSA:2.40.30.10 46 138 2.4E-29 T 19-04-2016 APA12_RS00540 ebdff4331dcbcfa8a1759b853f99b8ab 298 Gene3D G3DSA:3.40.50.80 139 296 4.2E-43 T 19-04-2016 APA12_RS00540 ebdff4331dcbcfa8a1759b853f99b8ab 298 SUPERFAMILY SSF63380 45 140 3.05E-25 T 19-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APA12_RS00540 ebdff4331dcbcfa8a1759b853f99b8ab 298 PANTHER PTHR19370:SF98 49 283 4.0E-106 T 19-04-2016 APA12_RS06595 498310652539148f3adc07d2a4c2626c 483 Pfam PF02321 Outer membrane efflux protein 67 265 1.2E-24 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APA12_RS06595 498310652539148f3adc07d2a4c2626c 483 Pfam PF02321 Outer membrane efflux protein 289 473 1.2E-19 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APA12_RS06595 498310652539148f3adc07d2a4c2626c 483 SUPERFAMILY SSF56954 4 478 6.54E-89 T 19-04-2016 APA12_RS06595 498310652539148f3adc07d2a4c2626c 483 Gene3D G3DSA:1.20.1600.10 56 480 2.1E-89 T 19-04-2016 APA12_RS06595 498310652539148f3adc07d2a4c2626c 483 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 21 475 1.8E-71 T 19-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 APA12_RS06595 498310652539148f3adc07d2a4c2626c 483 PANTHER PTHR30203 27 477 5.5E-66 T 19-04-2016 APA12_RS03680 fe38fa8cc7a658327bb11458202176fc 402 Pfam PF00202 Aminotransferase class-III 11 384 9.2E-116 T 19-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APA12_RS03680 fe38fa8cc7a658327bb11458202176fc 402 SUPERFAMILY SSF53383 4 386 5.28E-122 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APA12_RS03680 fe38fa8cc7a658327bb11458202176fc 402 Gene3D G3DSA:3.40.640.10 48 277 5.9E-90 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APA12_RS03680 fe38fa8cc7a658327bb11458202176fc 402 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 2 386 44.579 T 19-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 APA12_RS03680 fe38fa8cc7a658327bb11458202176fc 402 PANTHER PTHR11986:SF79 9 393 4.1E-177 T 19-04-2016 APA12_RS03680 fe38fa8cc7a658327bb11458202176fc 402 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 211 248 - T 19-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APA12_RS03680 fe38fa8cc7a658327bb11458202176fc 402 Gene3D G3DSA:3.90.1150.10 278 387 1.2E-29 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APA12_RS03680 fe38fa8cc7a658327bb11458202176fc 402 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 5 385 9.0E-143 T 19-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 APA12_RS03680 fe38fa8cc7a658327bb11458202176fc 402 PANTHER PTHR11986 9 393 4.1E-177 T 19-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APA12_RS01860 721c643ff72d5b5d3e47d93b39818376 355 Gene3D G3DSA:3.90.1150.10 263 349 2.2E-14 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APA12_RS01860 721c643ff72d5b5d3e47d93b39818376 355 PANTHER PTHR10289:SF8 5 350 7.1E-124 T 19-04-2016 APA12_RS01860 721c643ff72d5b5d3e47d93b39818376 355 PANTHER PTHR10289 5 350 7.1E-124 T 19-04-2016 APA12_RS01860 721c643ff72d5b5d3e47d93b39818376 355 SUPERFAMILY SSF53383 12 350 4.35E-87 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APA12_RS01860 721c643ff72d5b5d3e47d93b39818376 355 Gene3D G3DSA:3.40.640.10 9 259 7.1E-61 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APA12_RS01860 721c643ff72d5b5d3e47d93b39818376 355 Pfam PF01212 Beta-eliminating lyase 12 302 1.9E-59 T 19-04-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 APA12_RS04735 1cbb235ceeb007454a75de2309f62f25 225 SMART SM00322 59 124 5.6E-6 T 19-04-2016 IPR004087 K Homology domain GO:0003676 APA12_RS04735 1cbb235ceeb007454a75de2309f62f25 225 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 201 1.1E-40 T 19-04-2016 APA12_RS04735 1cbb235ceeb007454a75de2309f62f25 225 Pfam PF07650 KH domain 37 109 2.3E-18 T 19-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 APA12_RS04735 1cbb235ceeb007454a75de2309f62f25 225 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 205 39.434 T 19-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 APA12_RS04735 1cbb235ceeb007454a75de2309f62f25 225 Gene3D G3DSA:3.30.1140.32 107 206 9.8E-48 T 19-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 APA12_RS04735 1cbb235ceeb007454a75de2309f62f25 225 SUPERFAMILY SSF54814 2 105 3.14E-37 T 19-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 APA12_RS04735 1cbb235ceeb007454a75de2309f62f25 225 PANTHER PTHR11760:SF19 2 207 1.3E-132 T 19-04-2016 APA12_RS04735 1cbb235ceeb007454a75de2309f62f25 225 ProSitePatterns PS00548 Ribosomal protein S3 signature. 162 196 - T 19-04-2016 IPR018280 Ribosomal protein S3, conserved site APA12_RS04735 1cbb235ceeb007454a75de2309f62f25 225 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 3.0E-93 T 19-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 APA12_RS04735 1cbb235ceeb007454a75de2309f62f25 225 SUPERFAMILY SSF54821 107 205 2.75E-41 T 19-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 APA12_RS04735 1cbb235ceeb007454a75de2309f62f25 225 PANTHER PTHR11760 2 207 1.3E-132 T 19-04-2016 APA12_RS04735 1cbb235ceeb007454a75de2309f62f25 225 Gene3D G3DSA:3.30.300.20 17 106 1.6E-30 T 19-04-2016 IPR015946 K homology domain-like, alpha/beta APA12_RS05295 676a10e9039cef004c31c7f0014a6dd5 155 PANTHER PTHR23046:SF2 1 150 3.5E-77 T 19-04-2016 APA12_RS05295 676a10e9039cef004c31c7f0014a6dd5 155 PANTHER PTHR23046 1 150 3.5E-77 T 19-04-2016 APA12_RS05295 676a10e9039cef004c31c7f0014a6dd5 155 PIRSF PIRSF001338 1 153 7.2E-62 T 19-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 APA12_RS05295 676a10e9039cef004c31c7f0014a6dd5 155 SMART SM01001 1 146 3.1E-91 T 19-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APA12_RS05295 676a10e9039cef004c31c7f0014a6dd5 155 Pfam PF00731 AIR carboxylase 1 142 2.8E-60 T 19-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APA12_RS05295 676a10e9039cef004c31c7f0014a6dd5 155 SUPERFAMILY SSF52255 1 150 1.7E-61 T 19-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APA12_RS05295 676a10e9039cef004c31c7f0014a6dd5 155 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 1 147 2.3E-61 T 19-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APA12_RS05295 676a10e9039cef004c31c7f0014a6dd5 155 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 1 150 28.657 T 19-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APA12_RS05295 676a10e9039cef004c31c7f0014a6dd5 155 Gene3D G3DSA:3.40.50.7700 1 148 4.9E-68 T 19-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APA12_RS11685 d4b036e7c4be4ee148dbde3d53288706 454 Gene3D G3DSA:3.30.70.1070 374 442 3.5E-5 T 19-04-2016 IPR007730 Sporulation-related domain GO:0042834 APA12_RS11685 d4b036e7c4be4ee148dbde3d53288706 454 Pfam PF05036 Sporulation related domain 376 448 5.5E-8 T 19-04-2016 IPR007730 Sporulation-related domain GO:0042834 APA12_RS11685 d4b036e7c4be4ee148dbde3d53288706 454 Gene3D G3DSA:1.10.530.10 77 205 8.7E-36 T 19-04-2016 APA12_RS11685 d4b036e7c4be4ee148dbde3d53288706 454 PANTHER PTHR21666 57 203 6.8E-23 T 19-04-2016 APA12_RS11685 d4b036e7c4be4ee148dbde3d53288706 454 SUPERFAMILY SSF53955 63 205 1.25E-35 T 19-04-2016 IPR023346 Lysozyme-like domain APA12_RS11685 d4b036e7c4be4ee148dbde3d53288706 454 Pfam PF01464 Transglycosylase SLT domain 81 192 3.6E-20 T 19-04-2016 IPR008258 Transglycosylase SLT domain 1 APA12_RS00785 8de078cffa60e615f74a2052cf16eeb3 299 Pfam PF00072 Response regulator receiver domain 5 117 1.6E-25 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS00785 8de078cffa60e615f74a2052cf16eeb3 299 PANTHER PTHR26402 3 134 1.4E-47 T 19-04-2016 APA12_RS00785 8de078cffa60e615f74a2052cf16eeb3 299 PANTHER PTHR26402 218 286 1.4E-47 T 19-04-2016 APA12_RS00785 8de078cffa60e615f74a2052cf16eeb3 299 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 239 253 5.7E-11 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APA12_RS00785 8de078cffa60e615f74a2052cf16eeb3 299 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 269 281 5.7E-11 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APA12_RS00785 8de078cffa60e615f74a2052cf16eeb3 299 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 253 269 5.7E-11 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APA12_RS00785 8de078cffa60e615f74a2052cf16eeb3 299 SUPERFAMILY SSF52172 3 133 1.85E-36 T 19-04-2016 IPR011006 CheY-like superfamily APA12_RS00785 8de078cffa60e615f74a2052cf16eeb3 299 Gene3D G3DSA:3.40.50.2300 5 127 1.8E-35 T 19-04-2016 APA12_RS00785 8de078cffa60e615f74a2052cf16eeb3 299 Gene3D G3DSA:1.10.10.10 238 295 5.3E-24 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS00785 8de078cffa60e615f74a2052cf16eeb3 299 SMART SM00448 3 116 8.0E-30 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS00785 8de078cffa60e615f74a2052cf16eeb3 299 PANTHER PTHR26402:SF50 3 134 1.4E-47 T 19-04-2016 APA12_RS00785 8de078cffa60e615f74a2052cf16eeb3 299 PANTHER PTHR26402:SF50 218 286 1.4E-47 T 19-04-2016 APA12_RS00785 8de078cffa60e615f74a2052cf16eeb3 299 SUPERFAMILY SSF46894 232 295 1.6E-17 T 19-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APA12_RS00785 8de078cffa60e615f74a2052cf16eeb3 299 SMART SM00421 236 293 1.9E-18 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APA12_RS00785 8de078cffa60e615f74a2052cf16eeb3 299 Pfam PF00196 Bacterial regulatory proteins, luxR family 238 291 2.6E-17 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APA12_RS02295 fa2a6f06a06727eb63c372ce8114e492 195 Pfam PF02975 Methylamine dehydrogenase, L chain 82 193 8.3E-52 T 19-04-2016 IPR013504 Methylamine/Aralkylamine dehydrogenase light chain, C-terminal domain GO:0009308|GO:0016638|GO:0042597|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967|UniPathway: UPA00895 APA12_RS02295 fa2a6f06a06727eb63c372ce8114e492 195 Gene3D G3DSA:2.60.30.10 48 194 1.1E-58 T 19-04-2016 IPR013504 Methylamine/Aralkylamine dehydrogenase light chain, C-terminal domain GO:0009308|GO:0016638|GO:0042597|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967|UniPathway: UPA00895 APA12_RS02295 fa2a6f06a06727eb63c372ce8114e492 195 SUPERFAMILY SSF57561 79 194 2.88E-49 T 19-04-2016 IPR013504 Methylamine/Aralkylamine dehydrogenase light chain, C-terminal domain GO:0009308|GO:0016638|GO:0042597|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967|UniPathway: UPA00895 APA12_RS02295 fa2a6f06a06727eb63c372ce8114e492 195 PIRSF PIRSF000192 10 195 1.2E-66 T 19-04-2016 IPR016008 Amine dehydrogenase light chain GO:0009308|GO:0030058|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967|UniPathway: UPA00895 APA12_RS02295 fa2a6f06a06727eb63c372ce8114e492 195 TIGRFAM TIGR02659 TTQ_MADH_Lt: methylamine dehydrogenase (amicyanin) light chain 14 195 2.8E-65 T 19-04-2016 IPR004229 Methylamine dehydrogenase light chain GO:0030288|GO:0052876|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967|UniPathway: UPA00895 APA12_RS07330 bed059506451f101d038b43e8376e611 124 SUPERFAMILY SSF159664 1 122 4.32E-25 T 19-04-2016 IPR002750 CobE/GbiG C-terminal domain GO:0009236 APA12_RS07330 bed059506451f101d038b43e8376e611 124 Pfam PF01890 Cobalamin synthesis G C-terminus 2 120 2.1E-16 T 19-04-2016 IPR002750 CobE/GbiG C-terminal domain GO:0009236 APA12_RS07330 bed059506451f101d038b43e8376e611 124 Gene3D G3DSA:3.30.420.180 2 121 4.2E-23 T 19-04-2016 IPR002750 CobE/GbiG C-terminal domain GO:0009236 APA12_RS12865 cdbf52af590cb92e7eccfa23ca5d3246 495 PANTHER PTHR11895 2 488 2.9E-213 T 19-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APA12_RS12865 cdbf52af590cb92e7eccfa23ca5d3246 495 Pfam PF01425 Amidase 24 471 7.8E-150 T 19-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APA12_RS12865 cdbf52af590cb92e7eccfa23ca5d3246 495 ProSitePatterns PS00571 Amidases signature. 157 188 - T 19-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APA12_RS12865 cdbf52af590cb92e7eccfa23ca5d3246 495 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 13 480 7.7E-168 T 19-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APA12_RS12865 cdbf52af590cb92e7eccfa23ca5d3246 495 Gene3D G3DSA:3.90.1300.10 2 487 2.3E-174 T 19-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APA12_RS12865 cdbf52af590cb92e7eccfa23ca5d3246 495 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 10 482 90.709 T 19-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APA12_RS12865 cdbf52af590cb92e7eccfa23ca5d3246 495 PANTHER PTHR11895:SF7 2 488 2.9E-213 T 19-04-2016 APA12_RS12865 cdbf52af590cb92e7eccfa23ca5d3246 495 SUPERFAMILY SSF75304 3 487 7.19E-156 T 19-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APA12_RS12310 28aa6a3d2b74fda165cc596d4943d26f 121 PANTHER PTHR11715 2 120 3.0E-55 T 19-04-2016 IPR002930 Glycine cleavage system H-protein APA12_RS12310 28aa6a3d2b74fda165cc596d4943d26f 121 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 119 1.2E-42 T 19-04-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 APA12_RS12310 28aa6a3d2b74fda165cc596d4943d26f 121 Gene3D G3DSA:2.40.50.100 3 120 3.9E-46 T 19-04-2016 APA12_RS12310 28aa6a3d2b74fda165cc596d4943d26f 121 Pfam PF01597 Glycine cleavage H-protein 3 119 3.4E-42 T 19-04-2016 IPR002930 Glycine cleavage system H-protein APA12_RS12310 28aa6a3d2b74fda165cc596d4943d26f 121 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 43 72 - T 19-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site APA12_RS12310 28aa6a3d2b74fda165cc596d4943d26f 121 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 1 121 25.561 T 19-04-2016 IPR002930 Glycine cleavage system H-protein APA12_RS12310 28aa6a3d2b74fda165cc596d4943d26f 121 SUPERFAMILY SSF51230 3 120 2.44E-41 T 19-04-2016 IPR011053 Single hybrid motif APA12_RS00575 026ed9cf1e0b27b43c99e22f53423661 64 PANTHER PTHR33910 7 63 3.5E-15 T 19-04-2016 APA12_RS00575 026ed9cf1e0b27b43c99e22f53423661 64 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 7 61 2.6E-16 T 19-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 APA12_RS00575 026ed9cf1e0b27b43c99e22f53423661 64 PANTHER PTHR33910:SF1 7 63 3.5E-15 T 19-04-2016 APA12_RS00575 026ed9cf1e0b27b43c99e22f53423661 64 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 7 58 1.5E-14 T 19-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 APA12_RS00575 026ed9cf1e0b27b43c99e22f53423661 64 Hamap MF_00422 Protein translocase subunit SecE [secE]. 4 59 11.706 T 19-04-2016 IPR022943 Preprotein translocase subunit SecE APA12_RS00575 026ed9cf1e0b27b43c99e22f53423661 64 Gene3D G3DSA:1.20.5.1030 5 60 7.6E-18 T 19-04-2016 APA12_RS11655 e3f99fb7bcda17e169a6c20d2208e36f 100 Gene3D G3DSA:3.30.70.900 1 97 1.7E-30 T 19-04-2016 APA12_RS11655 e3f99fb7bcda17e169a6c20d2208e36f 100 SUPERFAMILY SSF54909 5 98 2.08E-27 T 19-04-2016 IPR011008 Dimeric alpha-beta barrel APA12_RS11655 e3f99fb7bcda17e169a6c20d2208e36f 100 PANTHER PTHR33336 5 100 5.0E-23 T 19-04-2016 APA12_RS11655 e3f99fb7bcda17e169a6c20d2208e36f 100 Pfam PF03992 Antibiotic biosynthesis monooxygenase 5 77 1.2E-14 T 19-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain APA12_RS11575 a2fb52a607bfc2dc5337b48209a34555 123 PANTHER PTHR30007:SF21 1 117 1.7E-50 T 19-04-2016 APA12_RS11575 a2fb52a607bfc2dc5337b48209a34555 123 PANTHER PTHR30007 1 117 1.7E-50 T 19-04-2016 APA12_RS11575 a2fb52a607bfc2dc5337b48209a34555 123 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 79 8.1E-26 T 19-04-2016 IPR025161 Putative transposase IS4/IS5 family APA12_RS02240 a2fb52a607bfc2dc5337b48209a34555 123 PANTHER PTHR30007:SF21 1 117 1.7E-50 T 19-04-2016 APA12_RS02240 a2fb52a607bfc2dc5337b48209a34555 123 PANTHER PTHR30007 1 117 1.7E-50 T 19-04-2016 APA12_RS02240 a2fb52a607bfc2dc5337b48209a34555 123 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 79 8.1E-26 T 19-04-2016 IPR025161 Putative transposase IS4/IS5 family APA12_RS06935 a2fb52a607bfc2dc5337b48209a34555 123 PANTHER PTHR30007:SF21 1 117 1.7E-50 T 19-04-2016 APA12_RS06935 a2fb52a607bfc2dc5337b48209a34555 123 PANTHER PTHR30007 1 117 1.7E-50 T 19-04-2016 APA12_RS06935 a2fb52a607bfc2dc5337b48209a34555 123 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 79 8.1E-26 T 19-04-2016 IPR025161 Putative transposase IS4/IS5 family APA12_RS13090 a2fb52a607bfc2dc5337b48209a34555 123 PANTHER PTHR30007:SF21 1 117 1.7E-50 T 19-04-2016 APA12_RS13090 a2fb52a607bfc2dc5337b48209a34555 123 PANTHER PTHR30007 1 117 1.7E-50 T 19-04-2016 APA12_RS13090 a2fb52a607bfc2dc5337b48209a34555 123 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 79 8.1E-26 T 19-04-2016 IPR025161 Putative transposase IS4/IS5 family APA12_RS06835 a2fb52a607bfc2dc5337b48209a34555 123 PANTHER PTHR30007:SF21 1 117 1.7E-50 T 19-04-2016 APA12_RS06835 a2fb52a607bfc2dc5337b48209a34555 123 PANTHER PTHR30007 1 117 1.7E-50 T 19-04-2016 APA12_RS06835 a2fb52a607bfc2dc5337b48209a34555 123 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 79 8.1E-26 T 19-04-2016 IPR025161 Putative transposase IS4/IS5 family APA12_RS11250 a2fb52a607bfc2dc5337b48209a34555 123 PANTHER PTHR30007:SF21 1 117 1.7E-50 T 19-04-2016 APA12_RS11250 a2fb52a607bfc2dc5337b48209a34555 123 PANTHER PTHR30007 1 117 1.7E-50 T 19-04-2016 APA12_RS11250 a2fb52a607bfc2dc5337b48209a34555 123 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 79 8.1E-26 T 19-04-2016 IPR025161 Putative transposase IS4/IS5 family APA12_RS01840 ce2655cbeb71ba24bfdb81431a89e64e 430 PANTHER PTHR34448:SF3 18 428 1.7E-195 T 19-04-2016 APA12_RS01840 ce2655cbeb71ba24bfdb81431a89e64e 430 SUPERFAMILY SSF144052 23 428 7.72E-137 T 19-04-2016 APA12_RS01840 ce2655cbeb71ba24bfdb81431a89e64e 430 Pfam PF02073 Thermophilic metalloprotease (M29) 24 426 2.3E-159 T 19-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 APA12_RS01840 ce2655cbeb71ba24bfdb81431a89e64e 430 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 263 282 3.2E-70 T 19-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 APA12_RS01840 ce2655cbeb71ba24bfdb81431a89e64e 430 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 98 117 3.2E-70 T 19-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 APA12_RS01840 ce2655cbeb71ba24bfdb81431a89e64e 430 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 407 426 3.2E-70 T 19-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 APA12_RS01840 ce2655cbeb71ba24bfdb81431a89e64e 430 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 319 339 3.2E-70 T 19-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 APA12_RS01840 ce2655cbeb71ba24bfdb81431a89e64e 430 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 381 403 3.2E-70 T 19-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 APA12_RS01840 ce2655cbeb71ba24bfdb81431a89e64e 430 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 33 50 3.2E-70 T 19-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 APA12_RS01840 ce2655cbeb71ba24bfdb81431a89e64e 430 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 342 363 3.2E-70 T 19-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 APA12_RS01840 ce2655cbeb71ba24bfdb81431a89e64e 430 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 174 196 3.2E-70 T 19-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 APA12_RS01840 ce2655cbeb71ba24bfdb81431a89e64e 430 PANTHER PTHR34448 18 428 1.7E-195 T 19-04-2016 APA12_RS13565 cc2cd51e4367696778bc5e5adb5ff5e5 358 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 12 356 2.1E-111 T 19-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APA12_RS13565 cc2cd51e4367696778bc5e5adb5ff5e5 358 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 9 358 43.757 T 19-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APA12_RS13565 cc2cd51e4367696778bc5e5adb5ff5e5 358 PANTHER PTHR21091:SF2 16 356 2.1E-101 T 19-04-2016 APA12_RS13565 cc2cd51e4367696778bc5e5adb5ff5e5 358 Gene3D G3DSA:3.20.20.210 8 356 4.2E-122 T 19-04-2016 APA12_RS13565 cc2cd51e4367696778bc5e5adb5ff5e5 358 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 153 169 - T 19-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APA12_RS13565 cc2cd51e4367696778bc5e5adb5ff5e5 358 SUPERFAMILY SSF51726 8 356 8.37E-93 T 19-04-2016 APA12_RS13565 cc2cd51e4367696778bc5e5adb5ff5e5 358 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 8 356 8.0E-108 T 19-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APA12_RS13565 cc2cd51e4367696778bc5e5adb5ff5e5 358 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 25 34 - T 19-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APA12_RS13565 cc2cd51e4367696778bc5e5adb5ff5e5 358 PANTHER PTHR21091 16 356 2.1E-101 T 19-04-2016 APA12_RS08340 22ab71a7ec9a5869b409f32bd5fb8d96 95 Pfam PF00216 Bacterial DNA-binding protein 5 93 2.4E-31 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APA12_RS08340 22ab71a7ec9a5869b409f32bd5fb8d96 95 PANTHER PTHR33175 5 95 4.1E-35 T 19-04-2016 APA12_RS08340 22ab71a7ec9a5869b409f32bd5fb8d96 95 Gene3D G3DSA:4.10.520.10 4 94 4.2E-34 T 19-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APA12_RS08340 22ab71a7ec9a5869b409f32bd5fb8d96 95 SMART SM00411 5 94 2.2E-35 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APA12_RS08340 22ab71a7ec9a5869b409f32bd5fb8d96 95 SUPERFAMILY SSF47729 5 94 6.77E-30 T 19-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APA12_RS08340 22ab71a7ec9a5869b409f32bd5fb8d96 95 PRINTS PR01727 Prokaryotic integration host factor signature 62 75 1.2E-14 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APA12_RS08340 22ab71a7ec9a5869b409f32bd5fb8d96 95 PRINTS PR01727 Prokaryotic integration host factor signature 44 59 1.2E-14 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APA12_RS08340 22ab71a7ec9a5869b409f32bd5fb8d96 95 PRINTS PR01727 Prokaryotic integration host factor signature 78 92 1.2E-14 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APA12_RS13300 bb1b1b9aace8751c7860f2075bfa4bbf 358 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 14 239 1.1E-110 T 19-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 APA12_RS13300 bb1b1b9aace8751c7860f2075bfa4bbf 358 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 358 162.849 T 19-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 APA12_RS13300 bb1b1b9aace8751c7860f2075bfa4bbf 358 SMART SM00382 56 183 2.3E-13 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS13300 bb1b1b9aace8751c7860f2075bfa4bbf 358 PANTHER PTHR13779:SF25 7 337 6.6E-155 T 19-04-2016 APA12_RS13300 bb1b1b9aace8751c7860f2075bfa4bbf 358 SUPERFAMILY SSF46785 263 337 1.17E-23 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS13300 bb1b1b9aace8751c7860f2075bfa4bbf 358 SUPERFAMILY SSF52540 25 257 1.64E-49 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS13300 bb1b1b9aace8751c7860f2075bfa4bbf 358 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 29 333 5.2E-130 T 19-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 APA12_RS13300 bb1b1b9aace8751c7860f2075bfa4bbf 358 Gene3D G3DSA:1.10.10.10 264 334 2.3E-30 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS13300 bb1b1b9aace8751c7860f2075bfa4bbf 358 PANTHER PTHR13779 7 337 6.6E-155 T 19-04-2016 APA12_RS13300 bb1b1b9aace8751c7860f2075bfa4bbf 358 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 260 333 4.0E-29 T 19-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 APA12_RS13300 bb1b1b9aace8751c7860f2075bfa4bbf 358 Gene3D G3DSA:3.40.50.300 25 178 1.4E-32 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS13300 bb1b1b9aace8751c7860f2075bfa4bbf 358 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 258 335 1.0E-32 T 19-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 APA12_RS13300 bb1b1b9aace8751c7860f2075bfa4bbf 358 Gene3D G3DSA:1.10.8.60 187 262 3.3E-26 T 19-04-2016 APA12_RS04120 711e90c359b6572079a54cba499fd449 275 SUPERFAMILY SSF53098 113 269 6.07E-40 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS04120 711e90c359b6572079a54cba499fd449 275 Pfam PF00665 Integrase core domain 118 230 1.9E-27 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APA12_RS04120 711e90c359b6572079a54cba499fd449 275 Gene3D G3DSA:3.30.420.10 113 268 6.8E-49 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS04120 711e90c359b6572079a54cba499fd449 275 PANTHER PTHR32552:SF26 27 268 2.1E-65 T 19-04-2016 APA12_RS04120 711e90c359b6572079a54cba499fd449 275 PANTHER PTHR32552 27 268 2.1E-65 T 19-04-2016 APA12_RS09520 711e90c359b6572079a54cba499fd449 275 SUPERFAMILY SSF53098 113 269 6.07E-40 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS09520 711e90c359b6572079a54cba499fd449 275 Pfam PF00665 Integrase core domain 118 230 1.9E-27 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APA12_RS09520 711e90c359b6572079a54cba499fd449 275 Gene3D G3DSA:3.30.420.10 113 268 6.8E-49 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS09520 711e90c359b6572079a54cba499fd449 275 PANTHER PTHR32552:SF26 27 268 2.1E-65 T 19-04-2016 APA12_RS09520 711e90c359b6572079a54cba499fd449 275 PANTHER PTHR32552 27 268 2.1E-65 T 19-04-2016 APA12_RS12520 fa2eb91628d7f9632780264c37edbc8c 414 SUPERFAMILY SSF102114 110 353 8.89E-53 T 19-04-2016 APA12_RS12520 fa2eb91628d7f9632780264c37edbc8c 414 SMART SM00729 130 348 2.8E-53 T 19-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APA12_RS12520 fa2eb91628d7f9632780264c37edbc8c 414 Pfam PF00919 Uncharacterized protein family UPF0004 6 82 8.1E-14 T 19-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 APA12_RS12520 fa2eb91628d7f9632780264c37edbc8c 414 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 5 404 8.0E-98 T 19-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 APA12_RS12520 fa2eb91628d7f9632780264c37edbc8c 414 Pfam PF04055 Radical SAM superfamily 135 307 1.9E-23 T 19-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APA12_RS12520 fa2eb91628d7f9632780264c37edbc8c 414 PANTHER PTHR11918 6 414 3.5E-113 T 19-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein APA12_RS12520 fa2eb91628d7f9632780264c37edbc8c 414 Gene3D G3DSA:3.80.30.20 129 359 5.9E-65 T 19-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APA12_RS12520 fa2eb91628d7f9632780264c37edbc8c 414 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 134 154 - T 19-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 APA12_RS12520 fa2eb91628d7f9632780264c37edbc8c 414 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 6 398 2.6E-123 T 19-04-2016 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 APA12_RS12520 fa2eb91628d7f9632780264c37edbc8c 414 PANTHER PTHR11918:SF45 6 414 3.5E-113 T 19-04-2016 APA12_RS04805 bcc3c04669288d833bcc74bee6b29d04 452 Hamap MF_01465 Protein translocase subunit SecY [secY]. 14 438 29.21 T 19-04-2016 IPR026593 Protein translocase subunit SecY APA12_RS04805 bcc3c04669288d833bcc74bee6b29d04 452 PIRSF PIRSF004557 2 445 1.2E-121 T 19-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 APA12_RS04805 bcc3c04669288d833bcc74bee6b29d04 452 PANTHER PTHR10906 22 451 5.5E-201 T 19-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 APA12_RS04805 bcc3c04669288d833bcc74bee6b29d04 452 Gene3D G3DSA:1.10.3370.10 17 442 2.2E-160 T 19-04-2016 IPR023201 SecY subunit domain APA12_RS04805 bcc3c04669288d833bcc74bee6b29d04 452 Pfam PF00344 SecY translocase 80 422 1.9E-115 T 19-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 APA12_RS04805 bcc3c04669288d833bcc74bee6b29d04 452 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 24 434 1.6E-124 T 19-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 APA12_RS04805 bcc3c04669288d833bcc74bee6b29d04 452 ProSitePatterns PS00756 Protein secY signature 2. 178 195 - T 19-04-2016 IPR030659 SecY conserved site APA12_RS04805 bcc3c04669288d833bcc74bee6b29d04 452 PRINTS PR00303 Preprotein translocase SecY subunit signature 120 143 1.3E-96 T 19-04-2016 APA12_RS04805 bcc3c04669288d833bcc74bee6b29d04 452 PRINTS PR00303 Preprotein translocase SecY subunit signature 185 208 1.3E-96 T 19-04-2016 APA12_RS04805 bcc3c04669288d833bcc74bee6b29d04 452 PRINTS PR00303 Preprotein translocase SecY subunit signature 277 296 1.3E-96 T 19-04-2016 APA12_RS04805 bcc3c04669288d833bcc74bee6b29d04 452 PRINTS PR00303 Preprotein translocase SecY subunit signature 79 99 1.3E-96 T 19-04-2016 APA12_RS04805 bcc3c04669288d833bcc74bee6b29d04 452 PRINTS PR00303 Preprotein translocase SecY subunit signature 159 184 1.3E-96 T 19-04-2016 APA12_RS04805 bcc3c04669288d833bcc74bee6b29d04 452 PRINTS PR00303 Preprotein translocase SecY subunit signature 407 425 1.3E-96 T 19-04-2016 APA12_RS04805 bcc3c04669288d833bcc74bee6b29d04 452 PRINTS PR00303 Preprotein translocase SecY subunit signature 375 393 1.3E-96 T 19-04-2016 APA12_RS04805 bcc3c04669288d833bcc74bee6b29d04 452 PRINTS PR00303 Preprotein translocase SecY subunit signature 320 342 1.3E-96 T 19-04-2016 APA12_RS04805 bcc3c04669288d833bcc74bee6b29d04 452 PRINTS PR00303 Preprotein translocase SecY subunit signature 27 45 1.3E-96 T 19-04-2016 APA12_RS04805 bcc3c04669288d833bcc74bee6b29d04 452 SUPERFAMILY SSF103491 15 429 2.48E-129 T 19-04-2016 IPR023201 SecY subunit domain APA12_RS04805 bcc3c04669288d833bcc74bee6b29d04 452 PANTHER PTHR10906:SF2 22 451 5.5E-201 T 19-04-2016 APA12_RS04805 bcc3c04669288d833bcc74bee6b29d04 452 ProSitePatterns PS00755 Protein secY signature 1. 80 99 - T 19-04-2016 IPR030659 SecY conserved site APA12_RS07350 7cec7fd68ed4e2684944476c96834f4d 241 PIRSF PIRSF036427 2 240 7.4E-68 T 19-04-2016 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 APA12_RS07350 7cec7fd68ed4e2684944476c96834f4d 241 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 217 3.2E-48 T 19-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 APA12_RS07350 7cec7fd68ed4e2684944476c96834f4d 241 PANTHER PTHR21091:SF127 1 216 1.6E-35 T 19-04-2016 APA12_RS07350 7cec7fd68ed4e2684944476c96834f4d 241 SUPERFAMILY SSF53790 2 238 2.22E-46 T 19-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 APA12_RS07350 7cec7fd68ed4e2684944476c96834f4d 241 Gene3D G3DSA:3.40.1010.10 3 135 1.5E-34 T 19-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 APA12_RS07350 7cec7fd68ed4e2684944476c96834f4d 241 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 4 234 5.7E-66 T 19-04-2016 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 APA12_RS07350 7cec7fd68ed4e2684944476c96834f4d 241 PANTHER PTHR21091 1 216 1.6E-35 T 19-04-2016 APA12_RS03505 a3fa934f708baa2606f764f3f43a4e4a 258 Pfam PF00005 ABC transporter 23 172 3.5E-33 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS03505 a3fa934f708baa2606f764f3f43a4e4a 258 Gene3D G3DSA:3.40.50.300 7 242 8.6E-73 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS03505 a3fa934f708baa2606f764f3f43a4e4a 258 PANTHER PTHR24220:SF567 9 255 5.8E-106 T 19-04-2016 APA12_RS03505 a3fa934f708baa2606f764f3f43a4e4a 258 PANTHER PTHR24220 9 255 5.8E-106 T 19-04-2016 APA12_RS03505 a3fa934f708baa2606f764f3f43a4e4a 258 SUPERFAMILY SSF52540 8 236 4.61E-64 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS03505 a3fa934f708baa2606f764f3f43a4e4a 258 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APA12_RS03505 a3fa934f708baa2606f764f3f43a4e4a 258 SMART SM00382 32 230 6.9E-15 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS10140 699fd23d874d6d15405fd80e72bfbd1c 152 Gene3D G3DSA:1.10.530.40 8 151 8.8E-35 T 19-04-2016 IPR023347 Lysozyme domain GO:0003796 APA12_RS10140 699fd23d874d6d15405fd80e72bfbd1c 152 PANTHER PTHR38107:SF2 8 149 5.7E-21 T 19-04-2016 APA12_RS10140 699fd23d874d6d15405fd80e72bfbd1c 152 PANTHER PTHR38107 8 149 5.7E-21 T 19-04-2016 APA12_RS10140 699fd23d874d6d15405fd80e72bfbd1c 152 Pfam PF00959 Phage lysozyme 29 126 1.5E-9 T 19-04-2016 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 APA12_RS10140 699fd23d874d6d15405fd80e72bfbd1c 152 SUPERFAMILY SSF53955 7 151 1.33E-35 T 19-04-2016 IPR023346 Lysozyme-like domain APA12_RS12350 f7a793c134d16bdf8aad9792d6555254 179 SUPERFAMILY SSF52374 11 167 2.6E-38 T 19-04-2016 APA12_RS12350 f7a793c134d16bdf8aad9792d6555254 179 PANTHER PTHR21342:SF1 5 176 5.6E-59 T 19-04-2016 APA12_RS12350 f7a793c134d16bdf8aad9792d6555254 179 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 126 148 3.6E-32 T 19-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APA12_RS12350 f7a793c134d16bdf8aad9792d6555254 179 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 99 115 3.6E-32 T 19-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APA12_RS12350 f7a793c134d16bdf8aad9792d6555254 179 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 29 50 3.6E-32 T 19-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APA12_RS12350 f7a793c134d16bdf8aad9792d6555254 179 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 11 29 3.6E-32 T 19-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APA12_RS12350 f7a793c134d16bdf8aad9792d6555254 179 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 13 169 5.4E-50 T 19-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APA12_RS12350 f7a793c134d16bdf8aad9792d6555254 179 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 11 172 30.964 T 19-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APA12_RS12350 f7a793c134d16bdf8aad9792d6555254 179 PANTHER PTHR21342 5 176 5.6E-59 T 19-04-2016 APA12_RS12350 f7a793c134d16bdf8aad9792d6555254 179 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 12 68 1.1E-17 T 19-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APA12_RS12350 f7a793c134d16bdf8aad9792d6555254 179 Pfam PF01467 Cytidylyltransferase-like 14 147 3.6E-17 T 19-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APA12_RS12350 f7a793c134d16bdf8aad9792d6555254 179 Gene3D G3DSA:3.40.50.620 10 169 1.2E-45 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS09990 6db044f02fc02810a4343ab2f1d4a532 178 PANTHER PTHR10938 10 178 1.1E-69 T 19-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 APA12_RS09990 6db044f02fc02810a4343ab2f1d4a532 178 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 93 177 4.8E-37 T 19-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 APA12_RS09990 6db044f02fc02810a4343ab2f1d4a532 178 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 10 178 28.893 T 19-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 APA12_RS09990 6db044f02fc02810a4343ab2f1d4a532 178 SUPERFAMILY SSF55200 92 177 1.83E-32 T 19-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 APA12_RS09990 6db044f02fc02810a4343ab2f1d4a532 178 SUPERFAMILY SSF54364 14 88 6.67E-29 T 19-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 APA12_RS09990 6db044f02fc02810a4343ab2f1d4a532 178 Gene3D G3DSA:3.10.20.80 13 88 8.8E-35 T 19-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 APA12_RS09990 6db044f02fc02810a4343ab2f1d4a532 178 Gene3D G3DSA:3.30.110.10 89 177 3.7E-38 T 19-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 APA12_RS09990 6db044f02fc02810a4343ab2f1d4a532 178 ProSitePatterns PS00938 Initiation factor 3 signature. 68 81 - T 19-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 APA12_RS09990 6db044f02fc02810a4343ab2f1d4a532 178 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 17 178 6.9E-66 T 19-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 APA12_RS09990 6db044f02fc02810a4343ab2f1d4a532 178 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 17 86 1.2E-30 T 19-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 APA12_RS05010 521145a4c304b83dc5751f5d873bd5fa 193 SUPERFAMILY SSF55729 48 174 2.02E-15 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase APA12_RS05010 521145a4c304b83dc5751f5d873bd5fa 193 Pfam PF00583 Acetyltransferase (GNAT) family 92 168 5.3E-6 T 19-04-2016 IPR000182 GNAT domain GO:0008080 APA12_RS05010 521145a4c304b83dc5751f5d873bd5fa 193 Gene3D G3DSA:3.40.630.30 58 176 1.5E-13 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase APA12_RS13330 dfa7a415656e5bc982fc9d41865458b5 415 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 19 415 1.4E-111 T 19-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 APA12_RS13330 dfa7a415656e5bc982fc9d41865458b5 415 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 31 413 4.0E-145 T 19-04-2016 APA12_RS13330 dfa7a415656e5bc982fc9d41865458b5 415 PANTHER PTHR23100:SF0 21 415 9.2E-159 T 19-04-2016 APA12_RS13330 dfa7a415656e5bc982fc9d41865458b5 415 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 415 148.269 T 19-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 APA12_RS13330 dfa7a415656e5bc982fc9d41865458b5 415 Gene3D G3DSA:3.60.70.12 18 287 4.2E-95 T 19-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 APA12_RS13330 dfa7a415656e5bc982fc9d41865458b5 415 SUPERFAMILY SSF56266 20 411 4.71E-134 T 19-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 APA12_RS13330 dfa7a415656e5bc982fc9d41865458b5 415 Pfam PF01960 ArgJ family 26 415 3.4E-136 T 19-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 APA12_RS13330 dfa7a415656e5bc982fc9d41865458b5 415 PANTHER PTHR23100 21 415 9.2E-159 T 19-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 APA12_RS01175 8b44bc33e56e7a474203c9c681dfbd52 247 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 20 222 2.0E-37 T 19-04-2016 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 APA12_RS01175 8b44bc33e56e7a474203c9c681dfbd52 247 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 22 218 3.8E-20 T 19-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APA12_RS01175 8b44bc33e56e7a474203c9c681dfbd52 247 SUPERFAMILY SSF56784 21 223 7.81E-37 T 19-04-2016 IPR023214 HAD-like domain APA12_RS01175 8b44bc33e56e7a474203c9c681dfbd52 247 PANTHER PTHR10788 21 235 5.0E-32 T 19-04-2016 APA12_RS01175 8b44bc33e56e7a474203c9c681dfbd52 247 Gene3D G3DSA:3.40.50.1000 171 225 1.4E-34 T 19-04-2016 IPR023214 HAD-like domain APA12_RS01175 8b44bc33e56e7a474203c9c681dfbd52 247 Gene3D G3DSA:3.40.50.1000 20 95 1.4E-34 T 19-04-2016 IPR023214 HAD-like domain APA12_RS01175 8b44bc33e56e7a474203c9c681dfbd52 247 Pfam PF02358 Trehalose-phosphatase 23 224 3.9E-32 T 19-04-2016 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 APA12_RS11800 a24fab7a3c501330201179067e01feb5 384 SMART SM00729 5 224 6.6E-49 T 19-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APA12_RS11800 a24fab7a3c501330201179067e01feb5 384 PANTHER PTHR13932 1 384 3.2E-136 T 19-04-2016 APA12_RS11800 a24fab7a3c501330201179067e01feb5 384 Pfam PF06969 HemN C-terminal domain 309 373 1.1E-14 T 19-04-2016 IPR010723 HemN, C-terminal APA12_RS11800 a24fab7a3c501330201179067e01feb5 384 SUPERFAMILY SSF102114 4 382 2.75E-105 T 19-04-2016 APA12_RS11800 a24fab7a3c501330201179067e01feb5 384 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 370 8.1E-95 T 19-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- APA12_RS11800 a24fab7a3c501330201179067e01feb5 384 Pfam PF04055 Radical SAM superfamily 10 171 9.6E-18 T 19-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APA12_RS11800 a24fab7a3c501330201179067e01feb5 384 Gene3D G3DSA:3.80.30.20 7 238 1.8E-29 T 19-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APA12_RS08360 eccfe6153903a09090d72d58fa4821c1 444 Gene3D G3DSA:3.10.50.40 156 219 2.1E-8 T 19-04-2016 APA12_RS08360 eccfe6153903a09090d72d58fa4821c1 444 TIGRFAM TIGR00115 tig: trigger factor 11 421 2.3E-131 T 19-04-2016 IPR005215 Trigger factor GO:0015031 APA12_RS08360 eccfe6153903a09090d72d58fa4821c1 444 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 264 422 4.5E-40 T 19-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 APA12_RS08360 eccfe6153903a09090d72d58fa4821c1 444 Gene3D G3DSA:1.10.3120.10 220 396 3.7E-53 T 19-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 APA12_RS08360 eccfe6153903a09090d72d58fa4821c1 444 SUPERFAMILY SSF102735 1 131 1.06E-36 T 19-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 APA12_RS08360 eccfe6153903a09090d72d58fa4821c1 444 Hamap MF_00303 Trigger factor [tig]. 1 427 21.339 T 19-04-2016 IPR005215 Trigger factor GO:0015031 APA12_RS08360 eccfe6153903a09090d72d58fa4821c1 444 Pfam PF05697 Bacterial trigger factor protein (TF) 1 145 4.3E-40 T 19-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 APA12_RS08360 eccfe6153903a09090d72d58fa4821c1 444 PIRSF PIRSF003095 1 441 8.5E-130 T 19-04-2016 IPR005215 Trigger factor GO:0015031 APA12_RS08360 eccfe6153903a09090d72d58fa4821c1 444 SUPERFAMILY SSF109998 252 437 7.69E-48 T 19-04-2016 IPR027304 Trigger factor/SurA domain APA12_RS08360 eccfe6153903a09090d72d58fa4821c1 444 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 162 240 2.9E-14 T 19-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 APA12_RS08360 eccfe6153903a09090d72d58fa4821c1 444 Gene3D G3DSA:3.30.70.1050 1 119 4.0E-35 T 19-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 APA12_RS08360 eccfe6153903a09090d72d58fa4821c1 444 SUPERFAMILY SSF54534 99 246 4.12E-31 T 19-04-2016 APA12_RS08360 eccfe6153903a09090d72d58fa4821c1 444 PANTHER PTHR30560 1 439 4.5E-106 T 19-04-2016 APA12_RS11100 9f78a5eb2669ebaa72dc4456e3abed73 386 PANTHER PTHR22935 29 385 5.6E-77 T 19-04-2016 APA12_RS11100 9f78a5eb2669ebaa72dc4456e3abed73 386 Pfam PF00144 Beta-lactamase 38 365 2.5E-70 T 19-04-2016 IPR001466 Beta-lactamase-related APA12_RS11100 9f78a5eb2669ebaa72dc4456e3abed73 386 SUPERFAMILY SSF56601 31 375 2.91E-86 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APA12_RS11100 9f78a5eb2669ebaa72dc4456e3abed73 386 Gene3D G3DSA:3.40.710.10 27 366 1.2E-89 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APA12_RS00780 5f304f6e4be626a1c5344cb350984fe4 335 Pfam PF00795 Carbon-nitrogen hydrolase 15 264 1.3E-30 T 19-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APA12_RS00780 5f304f6e4be626a1c5344cb350984fe4 335 Gene3D G3DSA:3.60.110.10 15 272 8.5E-46 T 19-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APA12_RS00780 5f304f6e4be626a1c5344cb350984fe4 335 PANTHER PTHR23088 1 288 2.2E-123 T 19-04-2016 APA12_RS00780 5f304f6e4be626a1c5344cb350984fe4 335 Hamap MF_01243 Formamidase [amiF]. 1 331 60.302 T 19-04-2016 IPR022843 Formamidase GO:0004328|GO:0006807 KEGG: 00460+3.5.1.49|KEGG: 00630+3.5.1.49|KEGG: 00910+3.5.1.49|MetaCyc: PWY-7142 APA12_RS00780 5f304f6e4be626a1c5344cb350984fe4 335 SUPERFAMILY SSF56317 14 275 4.19E-54 T 19-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APA12_RS00780 5f304f6e4be626a1c5344cb350984fe4 335 PANTHER PTHR23088:SF32 1 288 2.2E-123 T 19-04-2016 APA12_RS13230 c08982bf447ddceec6eb6741ee89bd58 1029 SUPERFAMILY SSF52540 318 441 2.55E-28 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS13230 c08982bf447ddceec6eb6741ee89bd58 1029 SUPERFAMILY SSF52540 488 706 2.55E-28 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS13230 c08982bf447ddceec6eb6741ee89bd58 1029 Pfam PF12705 PD-(D/E)XK nuclease superfamily 747 992 8.6E-24 T 19-04-2016 APA12_RS13230 c08982bf447ddceec6eb6741ee89bd58 1029 TIGRFAM TIGR02786 addB_alphas: double-strand break repair protein AddB 3 1021 7.1E-273 T 19-04-2016 IPR014153 Double-strand break repair protein AddB APA12_RS01870 e44b1bcbf3b59db419008c1576057673 193 SUPERFAMILY SSF53178 1 185 2.75E-63 T 19-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APA12_RS01870 e44b1bcbf3b59db419008c1576057673 193 PANTHER PTHR17224:SF1 1 185 1.7E-70 T 19-04-2016 APA12_RS01870 e44b1bcbf3b59db419008c1576057673 193 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 107 117 - T 19-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 APA12_RS01870 e44b1bcbf3b59db419008c1576057673 193 Gene3D G3DSA:3.40.50.1470 1 185 5.2E-68 T 19-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APA12_RS01870 e44b1bcbf3b59db419008c1576057673 193 PANTHER PTHR17224 1 185 1.7E-70 T 19-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APA12_RS01870 e44b1bcbf3b59db419008c1576057673 193 Pfam PF01195 Peptidyl-tRNA hydrolase 4 184 1.4E-51 T 19-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APA12_RS01870 e44b1bcbf3b59db419008c1576057673 193 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 1 184 2.3E-52 T 19-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APA12_RS01870 e44b1bcbf3b59db419008c1576057673 193 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 179 32.233 T 19-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APA12_RS13015 b075cac64c04c4fb0da2b79a2a36d32a 151 SUPERFAMILY SSF53927 5 149 2.51E-46 T 19-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 APA12_RS13015 b075cac64c04c4fb0da2b79a2a36d32a 151 Gene3D G3DSA:3.40.140.10 2 147 1.3E-50 T 19-04-2016 APA12_RS13015 b075cac64c04c4fb0da2b79a2a36d32a 151 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 90 - T 19-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 APA12_RS13015 b075cac64c04c4fb0da2b79a2a36d32a 151 Pfam PF14437 MafB19-like deaminase 1 149 7.4E-25 T 19-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 APA12_RS13015 b075cac64c04c4fb0da2b79a2a36d32a 151 PANTHER PTHR11079:SF72 7 149 2.5E-40 T 19-04-2016 APA12_RS13015 b075cac64c04c4fb0da2b79a2a36d32a 151 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 7 149 40.622 T 19-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 APA12_RS13015 b075cac64c04c4fb0da2b79a2a36d32a 151 PANTHER PTHR11079 7 149 2.5E-40 T 19-04-2016 APA12_RS02225 e951021289913917e65f732d1454d753 538 Gene3D G3DSA:3.40.640.10 133 344 6.5E-38 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APA12_RS02225 e951021289913917e65f732d1454d753 538 SUPERFAMILY SSF53383 126 346 1.83E-45 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APA12_RS02225 e951021289913917e65f732d1454d753 538 SUPERFAMILY SSF53383 380 522 1.83E-45 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APA12_RS02225 e951021289913917e65f732d1454d753 538 PANTHER PTHR11751:SF6 80 343 2.4E-121 T 19-04-2016 APA12_RS02225 e951021289913917e65f732d1454d753 538 PANTHER PTHR11751:SF6 378 448 2.4E-121 T 19-04-2016 APA12_RS02225 e951021289913917e65f732d1454d753 538 PANTHER PTHR11751:SF6 466 530 2.4E-121 T 19-04-2016 APA12_RS02225 e951021289913917e65f732d1454d753 538 Gene3D G3DSA:3.90.1150.10 385 524 3.7E-14 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APA12_RS02225 e951021289913917e65f732d1454d753 538 Pfam PF00155 Aminotransferase class I and II 162 508 4.2E-23 T 19-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APA12_RS02225 e951021289913917e65f732d1454d753 538 TIGRFAM TIGR03801 asp_4_decarbox: aspartate 4-decarboxylase 14 527 1.6E-225 T 19-04-2016 IPR022518 Aspartate 4-decarboxylase KEGG: 00220+2.6.1.1|KEGG: 00250+4.1.1.12+2.6.1.1|KEGG: 00270+4.1.1.12+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 APA12_RS02225 e951021289913917e65f732d1454d753 538 PANTHER PTHR11751 80 343 2.4E-121 T 19-04-2016 APA12_RS02225 e951021289913917e65f732d1454d753 538 PANTHER PTHR11751 378 448 2.4E-121 T 19-04-2016 APA12_RS02225 e951021289913917e65f732d1454d753 538 PANTHER PTHR11751 466 530 2.4E-121 T 19-04-2016 APA12_RS01605 a4be6ef5656cda26e7cecd998701aeb7 435 SUPERFAMILY SSF47384 171 243 7.26E-17 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS01605 a4be6ef5656cda26e7cecd998701aeb7 435 Gene3D G3DSA:1.10.287.130 175 230 8.7E-16 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS01605 a4be6ef5656cda26e7cecd998701aeb7 435 SUPERFAMILY SSF55874 234 417 2.23E-38 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS01605 a4be6ef5656cda26e7cecd998701aeb7 435 SMART SM00388 178 245 8.4E-19 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS01605 a4be6ef5656cda26e7cecd998701aeb7 435 Gene3D G3DSA:3.30.565.10 231 418 7.3E-42 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS01605 a4be6ef5656cda26e7cecd998701aeb7 435 PANTHER PTHR24423 118 142 1.6E-66 T 19-04-2016 APA12_RS01605 a4be6ef5656cda26e7cecd998701aeb7 435 PANTHER PTHR24423 174 417 1.6E-66 T 19-04-2016 APA12_RS01605 a4be6ef5656cda26e7cecd998701aeb7 435 Pfam PF00512 His Kinase A (phospho-acceptor) domain 180 243 8.4E-17 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS01605 a4be6ef5656cda26e7cecd998701aeb7 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 397 3.156614E-14 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS01605 a4be6ef5656cda26e7cecd998701aeb7 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 345 359 3.156614E-14 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS01605 a4be6ef5656cda26e7cecd998701aeb7 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 416 3.156614E-14 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS01605 a4be6ef5656cda26e7cecd998701aeb7 435 PANTHER PTHR24423:SF554 118 142 1.6E-66 T 19-04-2016 APA12_RS01605 a4be6ef5656cda26e7cecd998701aeb7 435 PANTHER PTHR24423:SF554 174 417 1.6E-66 T 19-04-2016 APA12_RS01605 a4be6ef5656cda26e7cecd998701aeb7 435 SMART SM00387 292 419 1.9E-32 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS01605 a4be6ef5656cda26e7cecd998701aeb7 435 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 292 417 4.8E-23 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS03265 9b9a2defffa3c3091929639bfc4e8403 135 Gene3D G3DSA:3.90.470.20 1 130 4.5E-32 T 19-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APA12_RS03265 9b9a2defffa3c3091929639bfc4e8403 135 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 5 132 1.0E-23 T 19-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APA12_RS03265 9b9a2defffa3c3091929639bfc4e8403 135 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 7 101 6.5E-19 T 19-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APA12_RS03265 9b9a2defffa3c3091929639bfc4e8403 135 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 6 132 2.6E-23 T 19-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APA12_RS03265 9b9a2defffa3c3091929639bfc4e8403 135 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 105 2.0E-27 T 19-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APA12_RS03265 9b9a2defffa3c3091929639bfc4e8403 135 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 132 21.681 T 19-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APA12_RS03265 9b9a2defffa3c3091929639bfc4e8403 135 SUPERFAMILY SSF56214 4 129 3.53E-27 T 19-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APA12_RS07060 819f22dcba9d8387c92c78329a075e75 600 Gene3D G3DSA:3.90.1300.10 7 450 2.1E-112 T 19-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APA12_RS07060 819f22dcba9d8387c92c78329a075e75 600 PANTHER PTHR11895:SF24 5 455 5.0E-184 T 19-04-2016 APA12_RS07060 819f22dcba9d8387c92c78329a075e75 600 PANTHER PTHR11895 5 455 5.0E-184 T 19-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APA12_RS07060 819f22dcba9d8387c92c78329a075e75 600 TIGRFAM TIGR02713 allophanate_hyd: allophanate hydrolase 43 598 9.5E-235 T 19-04-2016 IPR014085 Allophanate hydrolase KEGG: 00220+3.5.1.54|KEGG: 00791+3.5.1.54|MetaCyc: PWY-5169|MetaCyc: PWY-5703 APA12_RS07060 819f22dcba9d8387c92c78329a075e75 600 Pfam PF01425 Amidase 27 437 4.3E-86 T 19-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APA12_RS07060 819f22dcba9d8387c92c78329a075e75 600 Gene3D G3DSA:3.10.490.10 471 546 1.3E-4 T 19-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like APA12_RS07060 819f22dcba9d8387c92c78329a075e75 600 SUPERFAMILY SSF75304 7 448 1.26E-113 T 19-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APA12_RS05360 20e3a065242f0a13360d49277e0d5028 339 Pfam PF00268 Ribonucleotide reductase, small chain 24 296 1.0E-74 T 19-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 APA12_RS05360 20e3a065242f0a13360d49277e0d5028 339 PANTHER PTHR23409 1 336 3.6E-69 T 19-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 APA12_RS05360 20e3a065242f0a13360d49277e0d5028 339 PIRSF PIRSF000355 3 332 9.1E-102 T 19-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 APA12_RS05360 20e3a065242f0a13360d49277e0d5028 339 PANTHER PTHR23409:SF18 1 336 3.6E-69 T 19-04-2016 APA12_RS05360 20e3a065242f0a13360d49277e0d5028 339 Gene3D G3DSA:1.10.620.20 17 303 2.3E-101 T 19-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 APA12_RS05360 20e3a065242f0a13360d49277e0d5028 339 SUPERFAMILY SSF47240 24 333 4.87E-89 T 19-04-2016 IPR009078 Ferritin-like superfamily APA12_RS12795 1158172e13f2c04456f9ec5ff93e1ca5 625 Pfam PF13667 ThiC-associated domain 38 105 3.9E-23 T 19-04-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 APA12_RS12795 1158172e13f2c04456f9ec5ff93e1ca5 625 PANTHER PTHR30557 139 169 0.0 T 19-04-2016 APA12_RS12795 1158172e13f2c04456f9ec5ff93e1ca5 625 PANTHER PTHR30557 2 106 0.0 T 19-04-2016 APA12_RS12795 1158172e13f2c04456f9ec5ff93e1ca5 625 PANTHER PTHR30557 197 621 0.0 T 19-04-2016 APA12_RS12795 1158172e13f2c04456f9ec5ff93e1ca5 625 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 146 600 55.368 T 19-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 APA12_RS12795 1158172e13f2c04456f9ec5ff93e1ca5 625 PANTHER PTHR30557:SF1 139 169 0.0 T 19-04-2016 APA12_RS12795 1158172e13f2c04456f9ec5ff93e1ca5 625 PANTHER PTHR30557:SF1 2 106 0.0 T 19-04-2016 APA12_RS12795 1158172e13f2c04456f9ec5ff93e1ca5 625 PANTHER PTHR30557:SF1 197 621 0.0 T 19-04-2016 APA12_RS12795 1158172e13f2c04456f9ec5ff93e1ca5 625 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 146 597 1.5E-204 T 19-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 APA12_RS12795 1158172e13f2c04456f9ec5ff93e1ca5 625 Pfam PF01964 Radical SAM ThiC family 147 594 7.6E-196 T 19-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 APA12_RS04430 0140f22ef3157b7b4fd998f6ed3214d1 440 Pfam PF01029 NusB family 25 144 7.2E-18 T 19-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APA12_RS04430 0140f22ef3157b7b4fd998f6ed3214d1 440 PANTHER PTHR22807 58 439 6.3E-60 T 19-04-2016 APA12_RS04430 0140f22ef3157b7b4fd998f6ed3214d1 440 SUPERFAMILY SSF48013 26 165 1.5E-24 T 19-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APA12_RS04430 0140f22ef3157b7b4fd998f6ed3214d1 440 Gene3D G3DSA:1.10.940.10 24 165 2.1E-31 T 19-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APA12_RS04430 0140f22ef3157b7b4fd998f6ed3214d1 440 Gene3D G3DSA:3.40.50.150 235 439 2.5E-44 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS04430 0140f22ef3157b7b4fd998f6ed3214d1 440 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 316 328 1.1E-23 T 19-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APA12_RS04430 0140f22ef3157b7b4fd998f6ed3214d1 440 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 422 439 1.1E-23 T 19-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APA12_RS04430 0140f22ef3157b7b4fd998f6ed3214d1 440 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 366 382 1.1E-23 T 19-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APA12_RS04430 0140f22ef3157b7b4fd998f6ed3214d1 440 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 254 264 1.1E-23 T 19-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APA12_RS04430 0140f22ef3157b7b4fd998f6ed3214d1 440 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 225 239 1.1E-23 T 19-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APA12_RS04430 0140f22ef3157b7b4fd998f6ed3214d1 440 PANTHER PTHR22807:SF30 58 439 6.3E-60 T 19-04-2016 APA12_RS04430 0140f22ef3157b7b4fd998f6ed3214d1 440 Pfam PF01189 16S rRNA methyltransferase RsmB/F 244 437 6.1E-41 T 19-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APA12_RS04430 0140f22ef3157b7b4fd998f6ed3214d1 440 SUPERFAMILY SSF53335 208 439 5.63E-57 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS05925 781ac55cf83b34caf0b2c65725bfef7e 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 77 1.2E-34 T 19-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 APA12_RS05925 781ac55cf83b34caf0b2c65725bfef7e 79 Pfam PF00550 Phosphopantetheine attachment site 6 73 1.0E-15 T 19-04-2016 IPR009081 Phosphopantetheine binding ACP domain APA12_RS05925 781ac55cf83b34caf0b2c65725bfef7e 79 PANTHER PTHR20863 3 79 9.5E-32 T 19-04-2016 APA12_RS05925 781ac55cf83b34caf0b2c65725bfef7e 79 Gene3D G3DSA:1.10.1200.10 3 76 1.9E-34 T 19-04-2016 IPR009081 Phosphopantetheine binding ACP domain APA12_RS05925 781ac55cf83b34caf0b2c65725bfef7e 79 SUPERFAMILY SSF47336 1 76 3.27E-24 T 19-04-2016 IPR009081 Phosphopantetheine binding ACP domain APA12_RS05925 781ac55cf83b34caf0b2c65725bfef7e 79 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.967 T 19-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 APA12_RS05925 781ac55cf83b34caf0b2c65725bfef7e 79 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 1.0E-11 T 19-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 APA12_RS05925 781ac55cf83b34caf0b2c65725bfef7e 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 19-04-2016 IPR006162 Phosphopantetheine attachment site APA12_RS07870 729eb9fb6f1167fda2af688c2087d6c9 314 Gene3D G3DSA:3.40.190.10 103 240 6.8E-12 T 19-04-2016 APA12_RS07870 729eb9fb6f1167fda2af688c2087d6c9 314 Gene3D G3DSA:1.10.10.10 13 95 1.3E-14 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS07870 729eb9fb6f1167fda2af688c2087d6c9 314 PANTHER PTHR30126 14 308 2.7E-32 T 19-04-2016 APA12_RS07870 729eb9fb6f1167fda2af688c2087d6c9 314 SUPERFAMILY SSF53850 103 312 3.8E-20 T 19-04-2016 APA12_RS07870 729eb9fb6f1167fda2af688c2087d6c9 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 68 1.9E-12 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS07870 729eb9fb6f1167fda2af688c2087d6c9 314 SUPERFAMILY SSF46785 11 112 5.17E-13 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS07870 729eb9fb6f1167fda2af688c2087d6c9 314 Pfam PF03466 LysR substrate binding domain 101 307 6.7E-18 T 19-04-2016 IPR005119 LysR, substrate-binding APA12_RS12785 47cb214a1b59234a7665922b560fd685 447 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 321 2.0E-76 T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APA12_RS12785 47cb214a1b59234a7665922b560fd685 447 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.1E-46 T 19-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain APA12_RS12785 47cb214a1b59234a7665922b560fd685 447 Pfam PF02785 Biotin carboxylase C-terminal domain 335 441 2.8E-42 T 19-04-2016 IPR005482 Biotin carboxylase, C-terminal APA12_RS12785 47cb214a1b59234a7665922b560fd685 447 Gene3D G3DSA:3.30.470.20 204 441 1.7E-98 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APA12_RS12785 47cb214a1b59234a7665922b560fd685 447 PANTHER PTHR18866 1 441 2.2E-296 T 19-04-2016 APA12_RS12785 47cb214a1b59234a7665922b560fd685 447 SUPERFAMILY SSF56059 83 343 1.1E-67 T 19-04-2016 APA12_RS12785 47cb214a1b59234a7665922b560fd685 447 Gene3D G3DSA:3.40.50.20 1 128 7.5E-53 T 19-04-2016 IPR016185 Pre-ATP-grasp domain APA12_RS12785 47cb214a1b59234a7665922b560fd685 447 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 443 8.9E-223 T 19-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 APA12_RS12785 47cb214a1b59234a7665922b560fd685 447 SUPERFAMILY SSF51246 330 442 1.1E-45 T 19-04-2016 IPR011054 Rudiment single hybrid motif APA12_RS12785 47cb214a1b59234a7665922b560fd685 447 SUPERFAMILY SSF52440 1 113 3.81E-50 T 19-04-2016 IPR016185 Pre-ATP-grasp domain APA12_RS12785 47cb214a1b59234a7665922b560fd685 447 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APA12_RS12785 47cb214a1b59234a7665922b560fd685 447 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 285 292 - T 19-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APA12_RS12785 47cb214a1b59234a7665922b560fd685 447 Gene3D G3DSA:3.30.1490.20 129 202 1.3E-30 T 19-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APA12_RS12785 47cb214a1b59234a7665922b560fd685 447 SMART SM00878 335 440 8.7E-71 T 19-04-2016 IPR005482 Biotin carboxylase, C-terminal APA12_RS02280 8358fda57c16e214ee5d2b01f19e87a0 401 Pfam PF06433 Methylamine dehydrogenase heavy chain (MADH) 66 391 5.5E-52 T 19-04-2016 IPR009451 Amine dehydrogenase heavy chain GO:0030058|GO:0042597|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967 APA12_RS02280 8358fda57c16e214ee5d2b01f19e87a0 401 Gene3D G3DSA:2.130.10.10 26 398 1.9E-125 T 19-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APA12_RS02280 8358fda57c16e214ee5d2b01f19e87a0 401 SUPERFAMILY SSF50969 44 396 2.09E-69 T 19-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like APA12_RS01630 e79a31970988fbb99e3b0f677d146a1b 431 PANTHER PTHR41972 9 395 1.8E-41 T 19-04-2016 APA12_RS01630 e79a31970988fbb99e3b0f677d146a1b 431 ProSitePatterns PS00616 Histidine acid phosphatases phosphohistidine signature. 45 59 - T 19-04-2016 IPR033379 Histidine acid phosphatase active site APA12_RS01630 e79a31970988fbb99e3b0f677d146a1b 431 Gene3D G3DSA:3.40.50.1240 288 429 8.5E-36 T 19-04-2016 IPR029033 Histidine phosphatase superfamily APA12_RS01630 e79a31970988fbb99e3b0f677d146a1b 431 Gene3D G3DSA:3.40.50.1240 41 156 8.5E-36 T 19-04-2016 IPR029033 Histidine phosphatase superfamily APA12_RS01630 e79a31970988fbb99e3b0f677d146a1b 431 Gene3D G3DSA:3.40.50.1240 157 281 2.4E-12 T 19-04-2016 IPR029033 Histidine phosphatase superfamily APA12_RS01630 e79a31970988fbb99e3b0f677d146a1b 431 SUPERFAMILY SSF53254 41 427 3.7E-34 T 19-04-2016 IPR029033 Histidine phosphatase superfamily APA12_RS01630 e79a31970988fbb99e3b0f677d146a1b 431 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 45 179 2.2E-4 T 19-04-2016 IPR000560 Histidine phosphatase superfamily, clade-2 GO:0003993 APA12_RS00090 c674ccc05248b39e5469a1750d35e006 152 PANTHER PTHR23091 3 145 3.2E-27 T 19-04-2016 APA12_RS00090 c674ccc05248b39e5469a1750d35e006 152 Gene3D G3DSA:3.40.630.30 3 138 8.7E-29 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase APA12_RS00090 c674ccc05248b39e5469a1750d35e006 152 SUPERFAMILY SSF55729 4 139 1.28E-28 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase APA12_RS00090 c674ccc05248b39e5469a1750d35e006 152 Pfam PF00583 Acetyltransferase (GNAT) family 51 125 1.7E-15 T 19-04-2016 IPR000182 GNAT domain GO:0008080 APA12_RS00090 c674ccc05248b39e5469a1750d35e006 152 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 14 142 1.2E-28 T 19-04-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 APA12_RS03210 b769db42a9717f71bb69f7335661a5e0 214 Gene3D G3DSA:1.10.260.40 5 70 2.5E-6 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APA12_RS03210 b769db42a9717f71bb69f7335661a5e0 214 SUPERFAMILY SSF51306 123 174 3.66E-5 T 19-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C APA12_RS11185 782dafa0ba65bc4f47a8df4b37038a81 157 Pfam PF00866 Ring hydroxylating beta subunit 15 144 2.2E-16 T 19-04-2016 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 APA12_RS11185 782dafa0ba65bc4f47a8df4b37038a81 157 Gene3D G3DSA:3.10.450.50 6 156 1.1E-34 T 19-04-2016 IPR032710 NTF2-like domain APA12_RS11185 782dafa0ba65bc4f47a8df4b37038a81 157 SUPERFAMILY SSF54427 6 157 2.81E-33 T 19-04-2016 IPR032710 NTF2-like domain APA12_RS00250 c507f1877fb34b7ece10f76185dc9ef8 423 Pfam PF07690 Major Facilitator Superfamily 25 377 8.6E-16 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APA12_RS00250 c507f1877fb34b7ece10f76185dc9ef8 423 Gene3D G3DSA:1.20.1250.20 230 419 1.3E-9 T 19-04-2016 APA12_RS00250 c507f1877fb34b7ece10f76185dc9ef8 423 Gene3D G3DSA:1.20.1250.20 20 223 3.0E-12 T 19-04-2016 APA12_RS00250 c507f1877fb34b7ece10f76185dc9ef8 423 SUPERFAMILY SSF103473 13 419 3.92E-35 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS00250 c507f1877fb34b7ece10f76185dc9ef8 423 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 105 406 2.5E-68 T 19-04-2016 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0009276|GO:0015757|GO:0015758|GO:0016021 APA12_RS00250 c507f1877fb34b7ece10f76185dc9ef8 423 PANTHER PTHR23514 21 409 3.9E-101 T 19-04-2016 APA12_RS00250 c507f1877fb34b7ece10f76185dc9ef8 423 PANTHER PTHR23514:SF10 21 409 3.9E-101 T 19-04-2016 APA12_RS10860 61e2739fc022e5b7c658a99f019de2ef 387 Gene3D G3DSA:1.10.3470.10 56 384 3.2E-89 T 19-04-2016 IPR029022 ABC transporter, BtuC-like APA12_RS10860 61e2739fc022e5b7c658a99f019de2ef 387 PANTHER PTHR30472 46 387 3.5E-132 T 19-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APA12_RS10860 61e2739fc022e5b7c658a99f019de2ef 387 PANTHER PTHR30472:SF25 46 387 3.5E-132 T 19-04-2016 APA12_RS10860 61e2739fc022e5b7c658a99f019de2ef 387 Pfam PF01032 FecCD transport family 69 382 1.6E-78 T 19-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APA12_RS10860 61e2739fc022e5b7c658a99f019de2ef 387 SUPERFAMILY SSF81345 50 382 2.35E-70 T 19-04-2016 IPR029022 ABC transporter, BtuC-like APA12_RS07080 c3686ebdd36ede36d18bdc2c96058c93 544 PANTHER PTHR32552:SF18 276 544 4.6E-55 T 19-04-2016 APA12_RS07080 c3686ebdd36ede36d18bdc2c96058c93 544 PANTHER PTHR32552:SF18 173 260 4.6E-55 T 19-04-2016 APA12_RS07080 c3686ebdd36ede36d18bdc2c96058c93 544 Gene3D G3DSA:2.40.170.20 60 544 4.4E-77 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS07080 c3686ebdd36ede36d18bdc2c96058c93 544 PANTHER PTHR32552 276 544 4.6E-55 T 19-04-2016 APA12_RS07080 c3686ebdd36ede36d18bdc2c96058c93 544 PANTHER PTHR32552 173 260 4.6E-55 T 19-04-2016 APA12_RS07080 c3686ebdd36ede36d18bdc2c96058c93 544 SUPERFAMILY SSF56935 57 544 4.27E-65 T 19-04-2016 APA12_RS07080 c3686ebdd36ede36d18bdc2c96058c93 544 Pfam PF00593 TonB dependent receptor 284 542 3.1E-36 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS00030 1c4f894bc79488301f5971f8dcb94ba6 415 PANTHER PTHR23502:SF19 17 401 4.2E-93 T 19-04-2016 APA12_RS00030 1c4f894bc79488301f5971f8dcb94ba6 415 Pfam PF07690 Major Facilitator Superfamily 24 368 1.6E-35 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APA12_RS00030 1c4f894bc79488301f5971f8dcb94ba6 415 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 18 396 1.6E-77 T 19-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 APA12_RS00030 1c4f894bc79488301f5971f8dcb94ba6 415 SUPERFAMILY SSF103473 15 408 4.84E-55 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS00030 1c4f894bc79488301f5971f8dcb94ba6 415 Gene3D G3DSA:1.20.1250.20 19 196 1.2E-25 T 19-04-2016 APA12_RS00030 1c4f894bc79488301f5971f8dcb94ba6 415 Gene3D G3DSA:1.20.1250.20 219 408 7.5E-8 T 19-04-2016 APA12_RS00030 1c4f894bc79488301f5971f8dcb94ba6 415 PANTHER PTHR23502 17 401 4.2E-93 T 19-04-2016 APA12_RS00605 107bb52f024c7e1aa38278c52621ae2e 296 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 296 32.319 T 19-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APA12_RS00605 107bb52f024c7e1aa38278c52621ae2e 296 SUPERFAMILY SSF52943 2 296 1.83E-84 T 19-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain APA12_RS00605 107bb52f024c7e1aa38278c52621ae2e 296 PRINTS PR00126 ATP synthase gamma subunit signature 274 295 1.2E-31 T 19-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APA12_RS00605 107bb52f024c7e1aa38278c52621ae2e 296 PRINTS PR00126 ATP synthase gamma subunit signature 171 188 1.2E-31 T 19-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APA12_RS00605 107bb52f024c7e1aa38278c52621ae2e 296 PRINTS PR00126 ATP synthase gamma subunit signature 76 95 1.2E-31 T 19-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APA12_RS00605 107bb52f024c7e1aa38278c52621ae2e 296 PRINTS PR00126 ATP synthase gamma subunit signature 243 262 1.2E-31 T 19-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APA12_RS00605 107bb52f024c7e1aa38278c52621ae2e 296 Pfam PF00231 ATP synthase 3 295 3.5E-87 T 19-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APA12_RS00605 107bb52f024c7e1aa38278c52621ae2e 296 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 296 7.9E-95 T 19-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APA12_RS00605 107bb52f024c7e1aa38278c52621ae2e 296 Gene3D G3DSA:1.10.287.80 211 245 1.4E-30 T 19-04-2016 APA12_RS00605 107bb52f024c7e1aa38278c52621ae2e 296 Gene3D G3DSA:1.10.287.80 19 60 1.4E-30 T 19-04-2016 APA12_RS00605 107bb52f024c7e1aa38278c52621ae2e 296 PANTHER PTHR11693 1 296 7.8E-111 T 19-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APA12_RS00605 107bb52f024c7e1aa38278c52621ae2e 296 PIRSF PIRSF039089 1 296 1.6E-91 T 19-04-2016 APA12_RS00605 107bb52f024c7e1aa38278c52621ae2e 296 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 282 295 - T 19-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site APA12_RS00605 107bb52f024c7e1aa38278c52621ae2e 296 Gene3D G3DSA:3.40.1380.10 72 196 8.1E-34 T 19-04-2016 APA12_RS00605 107bb52f024c7e1aa38278c52621ae2e 296 Gene3D G3DSA:1.10.287.80 246 291 1.3E-24 T 19-04-2016 APA12_RS00520 d051790c77be0d22498cc7d1d34194dd 378 SUPERFAMILY SSF53383 21 377 7.21E-95 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APA12_RS00520 d051790c77be0d22498cc7d1d34194dd 378 PANTHER PTHR30244:SF12 5 378 1.2E-97 T 19-04-2016 APA12_RS00520 d051790c77be0d22498cc7d1d34194dd 378 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 25 377 1.9E-101 T 19-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase APA12_RS00520 d051790c77be0d22498cc7d1d34194dd 378 Gene3D G3DSA:3.90.1150.10 263 377 8.2E-36 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APA12_RS00520 d051790c77be0d22498cc7d1d34194dd 378 PIRSF PIRSF000390 5 378 2.1E-92 T 19-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase APA12_RS00520 d051790c77be0d22498cc7d1d34194dd 378 Gene3D G3DSA:3.40.640.10 19 258 3.6E-66 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APA12_RS00520 d051790c77be0d22498cc7d1d34194dd 378 PANTHER PTHR30244 5 378 1.2E-97 T 19-04-2016 APA12_RS02805 eac924d34e61d5484962fc20bfb990e9 274 SUPERFAMILY SSF47240 1 251 4.57E-48 T 19-04-2016 IPR009078 Ferritin-like superfamily APA12_RS02805 eac924d34e61d5484962fc20bfb990e9 274 Gene3D G3DSA:1.10.620.20 2 178 5.7E-19 T 19-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 APA12_RS00765 1d3ddecedd22d04c2ab22a01fd9543f1 423 SUPERFAMILY SSF53756 126 420 1.26E-22 T 19-04-2016 APA12_RS00765 1d3ddecedd22d04c2ab22a01fd9543f1 423 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 245 356 9.3E-9 T 19-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 APA12_RS00765 1d3ddecedd22d04c2ab22a01fd9543f1 423 Gene3D G3DSA:3.40.50.2000 234 421 1.6E-23 T 19-04-2016 APA12_RS00765 1d3ddecedd22d04c2ab22a01fd9543f1 423 TIGRFAM TIGR04414 hepto_Aah_TibC: autotransporter strand-loop-strand O-heptosyltransferase 28 417 1.8E-188 T 19-04-2016 IPR030929 Glycosyltransferase Aah/TibC GO:0016757 KEGG: 00540+2.4.-.- APA12_RS00570 4a4bed1f46a3461bc7a0c2cc9a531db2 176 Pfam PF02357 Transcription termination factor nusG 3 106 4.3E-28 T 19-04-2016 IPR006645 NusG, N-terminal GO:0006355 APA12_RS00570 4a4bed1f46a3461bc7a0c2cc9a531db2 176 ProSitePatterns PS01014 Transcription termination factor nusG signature. 159 168 - T 19-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site APA12_RS00570 4a4bed1f46a3461bc7a0c2cc9a531db2 176 PANTHER PTHR30265 1 176 2.8E-76 T 19-04-2016 APA12_RS00570 4a4bed1f46a3461bc7a0c2cc9a531db2 176 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 176 4.2E-71 T 19-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 APA12_RS00570 4a4bed1f46a3461bc7a0c2cc9a531db2 176 Gene3D G3DSA:3.30.70.940 3 112 1.2E-44 T 19-04-2016 IPR006645 NusG, N-terminal GO:0006355 APA12_RS00570 4a4bed1f46a3461bc7a0c2cc9a531db2 176 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 176 25.75 T 19-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 APA12_RS00570 4a4bed1f46a3461bc7a0c2cc9a531db2 176 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 4.2E-20 T 19-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 APA12_RS00570 4a4bed1f46a3461bc7a0c2cc9a531db2 176 PRINTS PR00338 Transcription termination factor NUSG signature 152 168 4.2E-20 T 19-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 APA12_RS00570 4a4bed1f46a3461bc7a0c2cc9a531db2 176 PRINTS PR00338 Transcription termination factor NUSG signature 134 149 4.2E-20 T 19-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 APA12_RS00570 4a4bed1f46a3461bc7a0c2cc9a531db2 176 SMART SM00739 122 149 2.3E-4 T 19-04-2016 IPR005824 KOW APA12_RS00570 4a4bed1f46a3461bc7a0c2cc9a531db2 176 SUPERFAMILY SSF50104 121 176 7.12E-19 T 19-04-2016 IPR008991 Translation protein SH3-like domain APA12_RS00570 4a4bed1f46a3461bc7a0c2cc9a531db2 176 Gene3D G3DSA:2.30.30.30 115 176 7.6E-30 T 19-04-2016 IPR014722 Ribosomal protein L2 domain 2 APA12_RS00570 4a4bed1f46a3461bc7a0c2cc9a531db2 176 SUPERFAMILY SSF82679 3 112 1.7E-39 T 19-04-2016 IPR006645 NusG, N-terminal GO:0006355 APA12_RS00570 4a4bed1f46a3461bc7a0c2cc9a531db2 176 SMART SM00738 2 110 2.4E-47 T 19-04-2016 IPR006645 NusG, N-terminal GO:0006355 APA12_RS11385 3f12f52bd1369fc15f5034299026716e 277 PANTHER PTHR34148:SF1 7 277 3.1E-40 T 19-04-2016 APA12_RS11385 3f12f52bd1369fc15f5034299026716e 277 Pfam PF02654 Cobalamin-5-phosphate synthase 22 269 9.9E-47 T 19-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 APA12_RS11385 3f12f52bd1369fc15f5034299026716e 277 PANTHER PTHR34148 7 277 3.1E-40 T 19-04-2016 APA12_RS11385 3f12f52bd1369fc15f5034299026716e 277 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 277 41.006 T 19-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 APA12_RS11385 3f12f52bd1369fc15f5034299026716e 277 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 46 271 2.2E-32 T 19-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 APA12_RS07820 16f83669d642f984f9a6ddb109246afb 366 PIRSF PIRSF001220 38 365 1.3E-97 T 19-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APA12_RS07820 16f83669d642f984f9a6ddb109246afb 366 SUPERFAMILY SSF53774 41 362 1.7E-99 T 19-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APA12_RS07820 16f83669d642f984f9a6ddb109246afb 366 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 46 54 - T 19-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 APA12_RS07820 16f83669d642f984f9a6ddb109246afb 366 PANTHER PTHR11707:SF29 37 353 5.7E-97 T 19-04-2016 APA12_RS07820 16f83669d642f984f9a6ddb109246afb 366 PIRSF PIRSF500176 40 365 8.5E-87 T 19-04-2016 APA12_RS07820 16f83669d642f984f9a6ddb109246afb 366 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 34 363 5.0E-117 T 19-04-2016 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 APA12_RS07820 16f83669d642f984f9a6ddb109246afb 366 Gene3D G3DSA:3.40.50.40 251 363 8.4E-37 T 19-04-2016 IPR027473 L-asparaginase, C-terminal domain APA12_RS07820 16f83669d642f984f9a6ddb109246afb 366 Gene3D G3DSA:3.40.50.1170 41 247 2.8E-68 T 19-04-2016 IPR027474 L-asparaginase, N-terminal APA12_RS07820 16f83669d642f984f9a6ddb109246afb 366 SMART SM00870 43 358 6.2E-138 T 19-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APA12_RS07820 16f83669d642f984f9a6ddb109246afb 366 Pfam PF00710 Asparaginase, N-terminal 43 231 6.8E-59 T 19-04-2016 IPR027474 L-asparaginase, N-terminal APA12_RS07820 16f83669d642f984f9a6ddb109246afb 366 PANTHER PTHR11707 37 353 5.7E-97 T 19-04-2016 APA12_RS07820 16f83669d642f984f9a6ddb109246afb 366 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 124 134 - T 19-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 APA12_RS07820 16f83669d642f984f9a6ddb109246afb 366 PRINTS PR00139 Asparaginase/glutaminase family signature 44 55 1.9E-22 T 19-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APA12_RS07820 16f83669d642f984f9a6ddb109246afb 366 PRINTS PR00139 Asparaginase/glutaminase family signature 298 316 1.9E-22 T 19-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APA12_RS07820 16f83669d642f984f9a6ddb109246afb 366 PRINTS PR00139 Asparaginase/glutaminase family signature 123 141 1.9E-22 T 19-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APA12_RS12290 ac2ab0abd633a6d825fe97d045d3cac7 178 PANTHER PTHR19136 1 173 9.3E-19 T 19-04-2016 APA12_RS12290 ac2ab0abd633a6d825fe97d045d3cac7 178 PANTHER PTHR19136:SF78 1 173 9.3E-19 T 19-04-2016 APA12_RS12290 ac2ab0abd633a6d825fe97d045d3cac7 178 SUPERFAMILY SSF53448 1 173 2.22E-11 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS12290 ac2ab0abd633a6d825fe97d045d3cac7 178 Gene3D G3DSA:3.90.550.10 2 173 2.0E-14 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS12290 ac2ab0abd633a6d825fe97d045d3cac7 178 Pfam PF12804 MobA-like NTP transferase domain 6 143 9.6E-19 T 19-04-2016 IPR025877 MobA-like NTP transferase APA12_RS00610 9b60f01d7924f47f280e75c86f2b3bd6 490 PANTHER PTHR15184:SF8 1 490 0.0 T 19-04-2016 APA12_RS00610 9b60f01d7924f47f280e75c86f2b3bd6 490 SUPERFAMILY SSF47917 371 487 6.8E-54 T 19-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APA12_RS00610 9b60f01d7924f47f280e75c86f2b3bd6 490 SUPERFAMILY SSF52540 92 373 8.3E-90 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS00610 9b60f01d7924f47f280e75c86f2b3bd6 490 Gene3D G3DSA:1.10.1140.10 371 487 1.5E-54 T 19-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APA12_RS00610 9b60f01d7924f47f280e75c86f2b3bd6 490 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 145 368 4.0E-64 T 19-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APA12_RS00610 9b60f01d7924f47f280e75c86f2b3bd6 490 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 359 368 - T 19-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APA12_RS00610 9b60f01d7924f47f280e75c86f2b3bd6 490 Hamap MF_01347 ATP synthase subunit beta [atpB]. 17 486 57.538 T 19-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APA12_RS00610 9b60f01d7924f47f280e75c86f2b3bd6 490 SMART SM00382 157 431 1.7E-6 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS00610 9b60f01d7924f47f280e75c86f2b3bd6 490 Gene3D G3DSA:3.40.50.300 92 369 7.9E-111 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS00610 9b60f01d7924f47f280e75c86f2b3bd6 490 SUPERFAMILY SSF50615 19 89 2.16E-23 T 19-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APA12_RS00610 9b60f01d7924f47f280e75c86f2b3bd6 490 PIRSF PIRSF039072 1 490 1.8E-274 T 19-04-2016 APA12_RS00610 9b60f01d7924f47f280e75c86f2b3bd6 490 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 19 486 1.8E-255 T 19-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APA12_RS00610 9b60f01d7924f47f280e75c86f2b3bd6 490 Gene3D G3DSA:2.40.10.170 12 89 6.1E-33 T 19-04-2016 APA12_RS00610 9b60f01d7924f47f280e75c86f2b3bd6 490 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 22 88 1.5E-23 T 19-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APA12_RS00610 9b60f01d7924f47f280e75c86f2b3bd6 490 PANTHER PTHR15184 1 490 0.0 T 19-04-2016 APA12_RS03950 6fa78e8cf48d1551c3221108fe8ceae5 881 PANTHER PTHR11777 1 881 0.0 T 19-04-2016 APA12_RS03950 6fa78e8cf48d1551c3221108fe8ceae5 881 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 6 860 9.6E-279 T 19-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APA12_RS03950 6fa78e8cf48d1551c3221108fe8ceae5 881 Gene3D G3DSA:3.30.980.10 679 693 3.8E-5 T 19-04-2016 APA12_RS03950 6fa78e8cf48d1551c3221108fe8ceae5 881 Gene3D G3DSA:3.30.980.10 563 621 3.8E-5 T 19-04-2016 APA12_RS03950 6fa78e8cf48d1551c3221108fe8ceae5 881 Gene3D G3DSA:3.30.930.10 2 241 5.9E-111 T 19-04-2016 APA12_RS03950 6fa78e8cf48d1551c3221108fe8ceae5 881 SUPERFAMILY SSF55186 552 714 2.22E-48 T 19-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 APA12_RS03950 6fa78e8cf48d1551c3221108fe8ceae5 881 SUPERFAMILY SSF101353 246 461 1.44E-55 T 19-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APA12_RS03950 6fa78e8cf48d1551c3221108fe8ceae5 881 SUPERFAMILY SSF50447 453 552 1.35E-19 T 19-04-2016 IPR009000 Translation protein, beta-barrel domain APA12_RS03950 6fa78e8cf48d1551c3221108fe8ceae5 881 Pfam PF02272 DHHA1 domain 805 874 5.8E-13 T 19-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 APA12_RS03950 6fa78e8cf48d1551c3221108fe8ceae5 881 SUPERFAMILY SSF55681 2 245 2.49E-105 T 19-04-2016 APA12_RS03950 6fa78e8cf48d1551c3221108fe8ceae5 881 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 653 703 8.0E-19 T 19-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 APA12_RS03950 6fa78e8cf48d1551c3221108fe8ceae5 881 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 881 185.324 T 19-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 APA12_RS03950 6fa78e8cf48d1551c3221108fe8ceae5 881 PRINTS PR00980 Alanyl-tRNA synthetase signature 199 210 6.4E-31 T 19-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APA12_RS03950 6fa78e8cf48d1551c3221108fe8ceae5 881 PRINTS PR00980 Alanyl-tRNA synthetase signature 274 290 6.4E-31 T 19-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APA12_RS03950 6fa78e8cf48d1551c3221108fe8ceae5 881 PRINTS PR00980 Alanyl-tRNA synthetase signature 226 239 6.4E-31 T 19-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APA12_RS03950 6fa78e8cf48d1551c3221108fe8ceae5 881 PRINTS PR00980 Alanyl-tRNA synthetase signature 75 86 6.4E-31 T 19-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APA12_RS03950 6fa78e8cf48d1551c3221108fe8ceae5 881 PRINTS PR00980 Alanyl-tRNA synthetase signature 298 311 6.4E-31 T 19-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APA12_RS03950 6fa78e8cf48d1551c3221108fe8ceae5 881 Pfam PF01411 tRNA synthetases class II (A) 6 556 4.1E-208 T 19-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 APA12_RS03950 6fa78e8cf48d1551c3221108fe8ceae5 881 PANTHER PTHR11777:SF9 1 881 0.0 T 19-04-2016 APA12_RS03950 6fa78e8cf48d1551c3221108fe8ceae5 881 SMART SM00863 653 703 4.2E-21 T 19-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 APA12_RS02150 e9cd98df97e1f3f5d571f08b2ccb6372 747 Gene3D G3DSA:3.20.20.80 183 554 6.1E-117 T 19-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APA12_RS02150 e9cd98df97e1f3f5d571f08b2ccb6372 747 SUPERFAMILY SSF55545 51 184 1.24E-21 T 19-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like APA12_RS02150 e9cd98df97e1f3f5d571f08b2ccb6372 747 PANTHER PTHR22600 50 445 7.7E-137 T 19-04-2016 APA12_RS02150 e9cd98df97e1f3f5d571f08b2ccb6372 747 PANTHER PTHR22600 479 553 7.7E-137 T 19-04-2016 APA12_RS02150 e9cd98df97e1f3f5d571f08b2ccb6372 747 Gene3D G3DSA:3.30.379.10 46 181 3.8E-18 T 19-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like APA12_RS02150 e9cd98df97e1f3f5d571f08b2ccb6372 747 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 185 525 1.1E-92 T 19-04-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APA12_RS02150 e9cd98df97e1f3f5d571f08b2ccb6372 747 PRINTS PR00738 Glycosyl hydrolase family 20 signature 208 229 6.2E-52 T 19-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APA12_RS02150 e9cd98df97e1f3f5d571f08b2ccb6372 747 PRINTS PR00738 Glycosyl hydrolase family 20 signature 260 277 6.2E-52 T 19-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APA12_RS02150 e9cd98df97e1f3f5d571f08b2ccb6372 747 PRINTS PR00738 Glycosyl hydrolase family 20 signature 507 524 6.2E-52 T 19-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APA12_RS02150 e9cd98df97e1f3f5d571f08b2ccb6372 747 PRINTS PR00738 Glycosyl hydrolase family 20 signature 179 196 6.2E-52 T 19-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APA12_RS02150 e9cd98df97e1f3f5d571f08b2ccb6372 747 PRINTS PR00738 Glycosyl hydrolase family 20 signature 329 342 6.2E-52 T 19-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APA12_RS02150 e9cd98df97e1f3f5d571f08b2ccb6372 747 PRINTS PR00738 Glycosyl hydrolase family 20 signature 490 506 6.2E-52 T 19-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APA12_RS02150 e9cd98df97e1f3f5d571f08b2ccb6372 747 PRINTS PR00738 Glycosyl hydrolase family 20 signature 307 325 6.2E-52 T 19-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APA12_RS02150 e9cd98df97e1f3f5d571f08b2ccb6372 747 PRINTS PR00738 Glycosyl hydrolase family 20 signature 144 164 6.2E-52 T 19-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APA12_RS02150 e9cd98df97e1f3f5d571f08b2ccb6372 747 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 49 181 2.3E-13 T 19-04-2016 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APA12_RS02150 e9cd98df97e1f3f5d571f08b2ccb6372 747 SUPERFAMILY SSF51445 185 538 9.6E-103 T 19-04-2016 IPR017853 Glycoside hydrolase superfamily APA12_RS13055 34af023d3ce0adec38873aaf8730d665 269 Gene3D G3DSA:1.10.443.10 94 263 6.4E-19 T 19-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APA12_RS13055 34af023d3ce0adec38873aaf8730d665 269 SUPERFAMILY SSF56349 19 263 4.71E-25 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APA12_RS13055 34af023d3ce0adec38873aaf8730d665 269 Pfam PF00589 Phage integrase family 94 256 5.0E-8 T 19-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APA12_RS13055 34af023d3ce0adec38873aaf8730d665 269 PANTHER PTHR30349:SF5 16 266 3.0E-13 T 19-04-2016 APA12_RS13055 34af023d3ce0adec38873aaf8730d665 269 PANTHER PTHR30349 16 266 3.0E-13 T 19-04-2016 APA12_RS03240 b7a358d66b1302876ae8979d68f17332 228 PANTHER PTHR11002:SF13 7 222 1.5E-69 T 19-04-2016 APA12_RS03240 b7a358d66b1302876ae8979d68f17332 228 SMART SM00947 37 207 3.6E-64 T 19-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APA12_RS03240 b7a358d66b1302876ae8979d68f17332 228 SUPERFAMILY SSF53056 11 220 5.89E-61 T 19-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APA12_RS03240 b7a358d66b1302876ae8979d68f17332 228 Pfam PF00484 Carbonic anhydrase 44 203 4.3E-47 T 19-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APA12_RS03240 b7a358d66b1302876ae8979d68f17332 228 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 49 56 - T 19-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APA12_RS03240 b7a358d66b1302876ae8979d68f17332 228 PANTHER PTHR11002 7 222 1.5E-69 T 19-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APA12_RS03240 b7a358d66b1302876ae8979d68f17332 228 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 92 112 - T 19-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APA12_RS03240 b7a358d66b1302876ae8979d68f17332 228 Gene3D G3DSA:3.40.1050.10 7 218 4.1E-70 T 19-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APA12_RS13005 c97ea5d4e4e0ed6641cb3a8f0d5eee1b 270 PANTHER PTHR24567:SF28 38 264 4.1E-52 T 19-04-2016 APA12_RS13005 c97ea5d4e4e0ed6641cb3a8f0d5eee1b 270 Gene3D G3DSA:1.10.10.10 186 264 2.7E-18 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS13005 c97ea5d4e4e0ed6641cb3a8f0d5eee1b 270 PANTHER PTHR24567 38 264 4.1E-52 T 19-04-2016 APA12_RS13005 c97ea5d4e4e0ed6641cb3a8f0d5eee1b 270 SUPERFAMILY SSF46785 181 264 1.55E-14 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS13005 c97ea5d4e4e0ed6641cb3a8f0d5eee1b 270 SMART SM00419 207 256 2.3E-9 T 19-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APA12_RS13005 c97ea5d4e4e0ed6641cb3a8f0d5eee1b 270 SMART SM00100 49 167 2.3E-12 T 19-04-2016 IPR000595 Cyclic nucleotide-binding domain APA12_RS13005 c97ea5d4e4e0ed6641cb3a8f0d5eee1b 270 Pfam PF00027 Cyclic nucleotide-binding domain 68 152 2.0E-10 T 19-04-2016 IPR000595 Cyclic nucleotide-binding domain APA12_RS13005 c97ea5d4e4e0ed6641cb3a8f0d5eee1b 270 SUPERFAMILY SSF51206 42 179 8.12E-28 T 19-04-2016 IPR018490 Cyclic nucleotide-binding-like APA12_RS13005 c97ea5d4e4e0ed6641cb3a8f0d5eee1b 270 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 229 244 3.1E-10 T 19-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APA12_RS13005 c97ea5d4e4e0ed6641cb3a8f0d5eee1b 270 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 213 229 3.1E-10 T 19-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APA12_RS13005 c97ea5d4e4e0ed6641cb3a8f0d5eee1b 270 ProSitePatterns PS00042 Crp-type HTH domain signature. 215 238 - T 19-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 APA12_RS13005 c97ea5d4e4e0ed6641cb3a8f0d5eee1b 270 Gene3D G3DSA:2.60.120.10 42 185 2.3E-20 T 19-04-2016 IPR014710 RmlC-like jelly roll fold APA12_RS13005 c97ea5d4e4e0ed6641cb3a8f0d5eee1b 270 Pfam PF13545 Crp-like helix-turn-helix domain 184 263 2.2E-16 T 19-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APA12_RS06370 f9d37cd77390925ef3a4d2b0fd26986e 573 PANTHER PTHR24221 8 270 2.2E-109 T 19-04-2016 APA12_RS06370 f9d37cd77390925ef3a4d2b0fd26986e 573 PANTHER PTHR24221 293 547 2.2E-109 T 19-04-2016 APA12_RS06370 f9d37cd77390925ef3a4d2b0fd26986e 573 Gene3D G3DSA:1.20.1560.10 26 333 1.1E-21 T 19-04-2016 APA12_RS06370 f9d37cd77390925ef3a4d2b0fd26986e 573 Pfam PF00664 ABC transporter transmembrane region 34 269 9.6E-15 T 19-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APA12_RS06370 f9d37cd77390925ef3a4d2b0fd26986e 573 Pfam PF00005 ABC transporter 370 519 1.2E-30 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS06370 f9d37cd77390925ef3a4d2b0fd26986e 573 SUPERFAMILY SSF90123 26 335 4.84E-30 T 19-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APA12_RS06370 f9d37cd77390925ef3a4d2b0fd26986e 573 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 21 551 7.7E-135 T 19-04-2016 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 APA12_RS06370 f9d37cd77390925ef3a4d2b0fd26986e 573 ProSitePatterns PS00211 ABC transporters family signature. 491 505 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APA12_RS06370 f9d37cd77390925ef3a4d2b0fd26986e 573 PANTHER PTHR24221:SF261 8 270 2.2E-109 T 19-04-2016 APA12_RS06370 f9d37cd77390925ef3a4d2b0fd26986e 573 PANTHER PTHR24221:SF261 293 547 2.2E-109 T 19-04-2016 APA12_RS06370 f9d37cd77390925ef3a4d2b0fd26986e 573 Gene3D G3DSA:3.40.50.300 352 568 3.0E-63 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS06370 f9d37cd77390925ef3a4d2b0fd26986e 573 SUPERFAMILY SSF52540 347 568 6.63E-65 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS06370 f9d37cd77390925ef3a4d2b0fd26986e 573 SMART SM00382 379 564 2.7E-17 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS13175 55d7367caf63fac1c41304100903fc7a 104 SUPERFAMILY SSF54292 1 101 1.14E-32 T 19-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APA12_RS13175 55d7367caf63fac1c41304100903fc7a 104 PANTHER PTHR23426 3 102 5.5E-47 T 19-04-2016 APA12_RS13175 55d7367caf63fac1c41304100903fc7a 104 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 39 49 - T 19-04-2016 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 APA12_RS13175 55d7367caf63fac1c41304100903fc7a 104 Gene3D G3DSA:3.10.20.30 1 101 7.5E-43 T 19-04-2016 IPR012675 Beta-grasp domain APA12_RS13175 55d7367caf63fac1c41304100903fc7a 104 PRINTS PR00355 Adrenodoxin signature 58 72 6.2E-11 T 19-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 APA12_RS13175 55d7367caf63fac1c41304100903fc7a 104 PRINTS PR00355 Adrenodoxin signature 39 49 6.2E-11 T 19-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 APA12_RS13175 55d7367caf63fac1c41304100903fc7a 104 PRINTS PR00355 Adrenodoxin signature 81 89 6.2E-11 T 19-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 APA12_RS13175 55d7367caf63fac1c41304100903fc7a 104 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 90 2.9E-14 T 19-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APA12_RS13175 55d7367caf63fac1c41304100903fc7a 104 PANTHER PTHR23426:SF25 3 102 5.5E-47 T 19-04-2016 APA12_RS08300 776c844f3d171069ecae410a6776e8b9 213 PANTHER PTHR10371 14 204 4.6E-89 T 19-04-2016 APA12_RS08300 776c844f3d171069ecae410a6776e8b9 213 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 134 152 - T 19-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 APA12_RS08300 776c844f3d171069ecae410a6776e8b9 213 PIRSF PIRSF000216 2 213 5.4E-65 T 19-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 APA12_RS08300 776c844f3d171069ecae410a6776e8b9 213 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 24 176 1.3E-50 T 19-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 APA12_RS08300 776c844f3d171069ecae410a6776e8b9 213 PANTHER PTHR10371:SF3 14 204 4.6E-89 T 19-04-2016 APA12_RS08300 776c844f3d171069ecae410a6776e8b9 213 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 26 176 1.4E-54 T 19-04-2016 APA12_RS08300 776c844f3d171069ecae410a6776e8b9 213 SUPERFAMILY SSF52833 16 194 2.68E-52 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS08300 776c844f3d171069ecae410a6776e8b9 213 Gene3D G3DSA:3.40.30.10 96 177 1.2E-9 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS05405 bcd21521bfcf9e942ff9b056760efc94 243 Gene3D G3DSA:3.60.21.10 19 236 1.4E-31 T 19-04-2016 IPR029052 Metallo-dependent phosphatase-like APA12_RS05405 bcd21521bfcf9e942ff9b056760efc94 243 Pfam PF00149 Calcineurin-like phosphoesterase 21 140 3.3E-8 T 19-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APA12_RS05405 bcd21521bfcf9e942ff9b056760efc94 243 PANTHER PTHR24032:SF31 3 200 7.7E-17 T 19-04-2016 APA12_RS05405 bcd21521bfcf9e942ff9b056760efc94 243 PANTHER PTHR24032 3 200 7.7E-17 T 19-04-2016 APA12_RS05405 bcd21521bfcf9e942ff9b056760efc94 243 SUPERFAMILY SSF56300 19 234 7.6E-28 T 19-04-2016 IPR029052 Metallo-dependent phosphatase-like APA12_RS06495 b5bc4aa34c867eb2a6251af317b3b739 451 TIGRFAM TIGR02715 amido_AtzE: amidohydrolase, AtzE family 8 440 3.8E-179 T 19-04-2016 IPR014087 Amidohydrolase, AtzE type KEGG: 00791+3.5.1.84|MetaCyc: PWY-5169|UniPathway: UPA00008 APA12_RS06495 b5bc4aa34c867eb2a6251af317b3b739 451 Gene3D G3DSA:3.90.1300.10 5 437 1.8E-121 T 19-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APA12_RS06495 b5bc4aa34c867eb2a6251af317b3b739 451 SUPERFAMILY SSF75304 5 436 2.62E-119 T 19-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APA12_RS06495 b5bc4aa34c867eb2a6251af317b3b739 451 PANTHER PTHR11895:SF74 6 445 5.2E-184 T 19-04-2016 APA12_RS06495 b5bc4aa34c867eb2a6251af317b3b739 451 Pfam PF01425 Amidase 25 427 2.8E-92 T 19-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APA12_RS06495 b5bc4aa34c867eb2a6251af317b3b739 451 PANTHER PTHR11895 6 445 5.2E-184 T 19-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APA12_RS02855 a8f5a56513a956c3271f3ba3272fb208 433 SUPERFAMILY SSF53098 127 370 1.44E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS02855 a8f5a56513a956c3271f3ba3272fb208 433 Pfam PF13701 Transposase DDE domain group 1 1 430 5.2E-159 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS01120 325c02d522708b2feecb866bf822e4ef 165 Gene3D G3DSA:3.90.280.10 3 160 7.1E-58 T 19-04-2016 IPR008914 Phosphatidylethanolamine-binding protein APA12_RS01120 325c02d522708b2feecb866bf822e4ef 165 Pfam PF01161 Phosphatidylethanolamine-binding protein 22 159 6.2E-40 T 19-04-2016 IPR008914 Phosphatidylethanolamine-binding protein APA12_RS01120 325c02d522708b2feecb866bf822e4ef 165 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 22 159 2.8E-49 T 19-04-2016 IPR005247 YbhB/YbcL APA12_RS01120 325c02d522708b2feecb866bf822e4ef 165 PANTHER PTHR30289 2 160 3.9E-78 T 19-04-2016 APA12_RS01120 325c02d522708b2feecb866bf822e4ef 165 SUPERFAMILY SSF49777 5 159 6.67E-54 T 19-04-2016 IPR008914 Phosphatidylethanolamine-binding protein APA12_RS01120 325c02d522708b2feecb866bf822e4ef 165 PANTHER PTHR30289:SF0 2 160 3.9E-78 T 19-04-2016 APA12_RS10935 b82577d852d8c21cb9c8d05e1ba708b3 501 PIRSF PIRSF006060 7 480 5.7E-55 T 19-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APA12_RS10935 b82577d852d8c21cb9c8d05e1ba708b3 501 Pfam PF00324 Amino acid permease 32 462 9.2E-104 T 19-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 APA12_RS10935 b82577d852d8c21cb9c8d05e1ba708b3 501 PANTHER PTHR11785 21 462 1.5E-226 T 19-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APA12_RS10935 b82577d852d8c21cb9c8d05e1ba708b3 501 PANTHER PTHR11785:SF25 21 462 1.5E-226 T 19-04-2016 APA12_RS11305 a35a0341db71bb296e447175a45cae66 769 Gene3D G3DSA:2.170.130.10 72 196 2.9E-30 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS11305 a35a0341db71bb296e447175a45cae66 769 PANTHER PTHR32552 88 769 3.2E-87 T 19-04-2016 APA12_RS11305 a35a0341db71bb296e447175a45cae66 769 SUPERFAMILY SSF56935 84 769 6.41E-97 T 19-04-2016 APA12_RS11305 a35a0341db71bb296e447175a45cae66 769 PANTHER PTHR32552:SF8 88 769 3.2E-87 T 19-04-2016 IPR030148 Catecholate siderophore receptor Fiu GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 APA12_RS11305 a35a0341db71bb296e447175a45cae66 769 Pfam PF07715 TonB-dependent Receptor Plug Domain 90 190 4.1E-17 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS11305 a35a0341db71bb296e447175a45cae66 769 Gene3D G3DSA:2.40.170.20 207 769 7.6E-103 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS08560 e68a885fb9789de79e868b8b690f5f1d 315 Gene3D G3DSA:3.50.50.60 234 307 5.4E-9 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS08560 e68a885fb9789de79e868b8b690f5f1d 315 Gene3D G3DSA:3.50.50.60 122 233 3.0E-35 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS08560 e68a885fb9789de79e868b8b690f5f1d 315 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 138 158 - T 19-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 APA12_RS08560 e68a885fb9789de79e868b8b690f5f1d 315 SUPERFAMILY SSF51905 2 311 1.04E-57 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS08560 e68a885fb9789de79e868b8b690f5f1d 315 PANTHER PTHR22912:SF48 1 312 5.3E-158 T 19-04-2016 APA12_RS08560 e68a885fb9789de79e868b8b690f5f1d 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 239 260 6.0E-79 T 19-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APA12_RS08560 e68a885fb9789de79e868b8b690f5f1d 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 6.0E-79 T 19-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APA12_RS08560 e68a885fb9789de79e868b8b690f5f1d 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 274 292 6.0E-79 T 19-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APA12_RS08560 e68a885fb9789de79e868b8b690f5f1d 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 6.0E-79 T 19-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APA12_RS08560 e68a885fb9789de79e868b8b690f5f1d 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 146 170 6.0E-79 T 19-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APA12_RS08560 e68a885fb9789de79e868b8b690f5f1d 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 6.0E-79 T 19-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APA12_RS08560 e68a885fb9789de79e868b8b690f5f1d 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 109 117 6.0E-79 T 19-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APA12_RS08560 e68a885fb9789de79e868b8b690f5f1d 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 198 214 6.0E-79 T 19-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APA12_RS08560 e68a885fb9789de79e868b8b690f5f1d 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 131 143 6.0E-79 T 19-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APA12_RS08560 e68a885fb9789de79e868b8b690f5f1d 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 6.8E-42 T 19-04-2016 APA12_RS08560 e68a885fb9789de79e868b8b690f5f1d 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 150 168 6.8E-42 T 19-04-2016 APA12_RS08560 e68a885fb9789de79e868b8b690f5f1d 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 286 6.8E-42 T 19-04-2016 APA12_RS08560 e68a885fb9789de79e868b8b690f5f1d 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 6.8E-42 T 19-04-2016 APA12_RS08560 e68a885fb9789de79e868b8b690f5f1d 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 108 126 6.8E-42 T 19-04-2016 APA12_RS08560 e68a885fb9789de79e868b8b690f5f1d 315 Gene3D G3DSA:3.50.50.60 6 121 1.8E-32 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS08560 e68a885fb9789de79e868b8b690f5f1d 315 PANTHER PTHR22912 1 312 5.3E-158 T 19-04-2016 APA12_RS08560 e68a885fb9789de79e868b8b690f5f1d 315 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 1.0E-51 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS08560 e68a885fb9789de79e868b8b690f5f1d 315 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 311 7.8E-124 T 19-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 APA12_RS05705 69a42c21b14b7263ee4396a35c5d7e85 386 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 10 361 34.018 T 19-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 APA12_RS05705 69a42c21b14b7263ee4396a35c5d7e85 386 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 12 357 3.0E-138 T 19-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 APA12_RS05705 69a42c21b14b7263ee4396a35c5d7e85 386 PIRSF PIRSF004640 5 368 3.1E-146 T 19-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 APA12_RS05705 69a42c21b14b7263ee4396a35c5d7e85 386 SUPERFAMILY SSF51412 27 138 1.19E-10 T 19-04-2016 APA12_RS05705 69a42c21b14b7263ee4396a35c5d7e85 386 Gene3D G3DSA:3.20.20.70 27 134 7.6E-10 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS05705 69a42c21b14b7263ee4396a35c5d7e85 386 PANTHER PTHR30454 10 370 8.2E-178 T 19-04-2016 APA12_RS05705 69a42c21b14b7263ee4396a35c5d7e85 386 Pfam PF04551 GcpE protein 16 357 1.6E-131 T 19-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 APA12_RS05705 69a42c21b14b7263ee4396a35c5d7e85 386 SUPERFAMILY SSF56014 270 360 1.38E-14 T 19-04-2016 APA12_RS11480 8cda050c830cab29fa4077fa48093b1c 302 SUPERFAMILY SSF53807 33 298 2.85E-44 T 19-04-2016 APA12_RS11480 8cda050c830cab29fa4077fa48093b1c 302 PANTHER PTHR30477 1 273 1.9E-27 T 19-04-2016 APA12_RS11480 8cda050c830cab29fa4077fa48093b1c 302 Gene3D G3DSA:3.40.50.1980 37 181 6.3E-30 T 19-04-2016 APA12_RS11480 8cda050c830cab29fa4077fa48093b1c 302 PANTHER PTHR30477:SF1 1 273 1.9E-27 T 19-04-2016 APA12_RS11480 8cda050c830cab29fa4077fa48093b1c 302 Pfam PF01297 Zinc-uptake complex component A periplasmic 40 275 1.7E-32 T 19-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 APA12_RS06760 8d7942dc46fb2e210af58143e14e9839 715 PANTHER PTHR30441 23 671 5.3E-19 T 19-04-2016 APA12_RS06760 8d7942dc46fb2e210af58143e14e9839 715 Pfam PF05170 AsmA family 241 547 3.1E-25 T 19-04-2016 IPR007844 AsmA APA12_RS12965 0743c2ad67615b15b51883faaf558520 529 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 31 514 7.3E-113 T 19-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 APA12_RS12965 0743c2ad67615b15b51883faaf558520 529 SUPERFAMILY SSF56954 25 53 1.23E-104 T 19-04-2016 APA12_RS12965 0743c2ad67615b15b51883faaf558520 529 SUPERFAMILY SSF56954 80 517 1.23E-104 T 19-04-2016 APA12_RS12965 0743c2ad67615b15b51883faaf558520 529 Gene3D G3DSA:1.20.1600.10 76 518 2.0E-115 T 19-04-2016 APA12_RS12965 0743c2ad67615b15b51883faaf558520 529 Pfam PF02321 Outer membrane efflux protein 331 512 3.9E-27 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APA12_RS12965 0743c2ad67615b15b51883faaf558520 529 Pfam PF02321 Outer membrane efflux protein 92 302 9.0E-25 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APA12_RS12965 0743c2ad67615b15b51883faaf558520 529 PANTHER PTHR30203 9 516 6.0E-131 T 19-04-2016 APA12_RS12965 0743c2ad67615b15b51883faaf558520 529 PANTHER PTHR30203:SF3 9 516 6.0E-131 T 19-04-2016 APA12_RS12645 a5a81c1f87e3dd23920dd134ac0e7a17 302 PANTHER PTHR34934 38 275 2.3E-50 T 19-04-2016 APA12_RS12645 a5a81c1f87e3dd23920dd134ac0e7a17 302 Hamap MF_01408 Thymidylate synthase ThyX [thyX]. 40 262 28.411 T 19-04-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 APA12_RS12645 a5a81c1f87e3dd23920dd134ac0e7a17 302 Pfam PF02511 Thymidylate synthase complementing protein 46 248 2.3E-54 T 19-04-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 APA12_RS12645 a5a81c1f87e3dd23920dd134ac0e7a17 302 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 45 254 4.3E-64 T 19-04-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 APA12_RS12645 a5a81c1f87e3dd23920dd134ac0e7a17 302 SUPERFAMILY SSF69796 38 260 7.45E-67 T 19-04-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 APA12_RS09095 4c2f1de97dc4868cc163a49e3d0706f3 461 Pfam PF13701 Transposase DDE domain group 1 13 458 2.4E-165 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS09095 4c2f1de97dc4868cc163a49e3d0706f3 461 SUPERFAMILY SSF53098 158 398 1.14E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS08640 b568e96f181713891c25b7c23bb3a383 249 Gene3D G3DSA:3.40.50.2300 23 157 2.5E-39 T 19-04-2016 APA12_RS08640 b568e96f181713891c25b7c23bb3a383 249 Pfam PF00486 Transcriptional regulatory protein, C terminal 173 245 2.0E-19 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APA12_RS08640 b568e96f181713891c25b7c23bb3a383 249 PANTHER PTHR26402 23 247 1.7E-79 T 19-04-2016 APA12_RS08640 b568e96f181713891c25b7c23bb3a383 249 Pfam PF00072 Response regulator receiver domain 25 134 2.9E-28 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS08640 b568e96f181713891c25b7c23bb3a383 249 PANTHER PTHR26402:SF292 23 247 1.7E-79 T 19-04-2016 APA12_RS08640 b568e96f181713891c25b7c23bb3a383 249 Gene3D G3DSA:1.10.10.10 158 247 6.3E-23 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS08640 b568e96f181713891c25b7c23bb3a383 249 SMART SM00448 23 134 2.1E-40 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS08640 b568e96f181713891c25b7c23bb3a383 249 SUPERFAMILY SSF52172 23 146 1.85E-39 T 19-04-2016 IPR011006 CheY-like superfamily APA12_RS08640 b568e96f181713891c25b7c23bb3a383 249 SMART SM00862 171 245 1.5E-20 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APA12_RS08640 b568e96f181713891c25b7c23bb3a383 249 SUPERFAMILY SSF46894 152 245 2.69E-20 T 19-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APA12_RS09410 0c0c66f196d39e7cea3691b9ecebec9c 413 SUPERFAMILY SSF81342 28 284 1.48E-86 T 19-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 APA12_RS09410 0c0c66f196d39e7cea3691b9ecebec9c 413 PIRSF PIRSF038885 13 412 2.8E-149 T 19-04-2016 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 APA12_RS09410 0c0c66f196d39e7cea3691b9ecebec9c 413 Gene3D G3DSA:1.20.810.10 22 402 1.4E-138 T 19-04-2016 IPR027387 Cytochrome b/b6-like domain APA12_RS09410 0c0c66f196d39e7cea3691b9ecebec9c 413 PANTHER PTHR19271 17 406 1.8E-163 T 19-04-2016 APA12_RS09410 0c0c66f196d39e7cea3691b9ecebec9c 413 Pfam PF00033 Cytochrome b/b6/petB 39 224 1.1E-56 T 19-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 APA12_RS09410 0c0c66f196d39e7cea3691b9ecebec9c 413 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 282 383 2.9E-33 T 19-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 APA12_RS09410 0c0c66f196d39e7cea3691b9ecebec9c 413 PANTHER PTHR19271:SF9 17 406 1.8E-163 T 19-04-2016 APA12_RS09410 0c0c66f196d39e7cea3691b9ecebec9c 413 SUPERFAMILY SSF81648 285 403 5.01E-33 T 19-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 APA12_RS11475 a500ae68b2c150f2038936738348cfe3 268 SUPERFAMILY SSF52540 5 217 1.02E-53 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS11475 a500ae68b2c150f2038936738348cfe3 268 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APA12_RS11475 a500ae68b2c150f2038936738348cfe3 268 PANTHER PTHR24220 7 235 1.9E-66 T 19-04-2016 APA12_RS11475 a500ae68b2c150f2038936738348cfe3 268 Pfam PF00005 ABC transporter 21 165 7.4E-31 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS11475 a500ae68b2c150f2038936738348cfe3 268 Gene3D G3DSA:3.40.50.300 4 230 1.2E-55 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS11475 a500ae68b2c150f2038936738348cfe3 268 SMART SM00382 30 222 1.1E-10 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS09100 11edc024fe3ddc9ca11840443d13f4b2 219 PANTHER PTHR35604 38 146 1.7E-14 T 19-04-2016 APA12_RS09100 11edc024fe3ddc9ca11840443d13f4b2 219 Pfam PF05598 Transposase domain (DUF772) 38 109 3.0E-22 T 19-04-2016 IPR008490 Transposase InsH, N-terminal APA12_RS05100 268cac063c50367c8eae357c0845b244 322 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 118 129 - T 19-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APA12_RS05100 268cac063c50367c8eae357c0845b244 322 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 41 311 2.5E-70 T 19-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APA12_RS05100 268cac063c50367c8eae357c0845b244 322 PANTHER PTHR21091:SF18 41 275 2.1E-67 T 19-04-2016 APA12_RS05100 268cac063c50367c8eae357c0845b244 322 PANTHER PTHR21091 41 275 2.1E-67 T 19-04-2016 APA12_RS05100 268cac063c50367c8eae357c0845b244 322 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 41 246 3.7E-28 T 19-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 APA12_RS05100 268cac063c50367c8eae357c0845b244 322 PIRSF PIRSF005917 30 316 4.0E-93 T 19-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APA12_RS05100 268cac063c50367c8eae357c0845b244 322 Gene3D G3DSA:3.40.1010.10 41 147 1.8E-10 T 19-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 APA12_RS05100 268cac063c50367c8eae357c0845b244 322 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 40 264 34.406 T 19-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APA12_RS05100 268cac063c50367c8eae357c0845b244 322 SUPERFAMILY SSF53790 40 262 2.88E-75 T 19-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 APA12_RS05100 268cac063c50367c8eae357c0845b244 322 Gene3D G3DSA:3.30.950.10 148 265 2.2E-36 T 19-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 APA12_RS03320 9f398bf531382cd6cf421561cd9d5c9f 290 Pfam PF03938 Outer membrane protein (OmpH-like) 95 239 3.7E-21 T 19-04-2016 IPR005632 Chaperone protein Skp GO:0051082 APA12_RS03320 9f398bf531382cd6cf421561cd9d5c9f 290 SUPERFAMILY SSF111384 100 241 5.1E-20 T 19-04-2016 IPR024930 Skp domain APA12_RS03320 9f398bf531382cd6cf421561cd9d5c9f 290 SMART SM00935 80 241 1.1E-30 T 19-04-2016 IPR005632 Chaperone protein Skp GO:0051082 APA12_RS03320 9f398bf531382cd6cf421561cd9d5c9f 290 Gene3D G3DSA:3.30.910.20 99 136 5.9E-12 T 19-04-2016 APA12_RS03320 9f398bf531382cd6cf421561cd9d5c9f 290 Gene3D G3DSA:3.30.910.20 174 241 5.9E-12 T 19-04-2016 APA12_RS07580 d4c1718cf4619f3a41fd334fe32bf018 154 SUPERFAMILY SSF46626 26 132 4.58E-16 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS07580 d4c1718cf4619f3a41fd334fe32bf018 154 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 24 110 2.0E-8 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS07580 d4c1718cf4619f3a41fd334fe32bf018 154 Gene3D G3DSA:1.10.760.10 26 137 6.8E-20 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS11005 527581fb3cd3c82ccc663d0ec60916bc 336 SUPERFAMILY SSF52833 1 134 1.98E-6 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS11005 527581fb3cd3c82ccc663d0ec60916bc 336 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 237 319 7.0E-12 T 19-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 APA12_RS11005 527581fb3cd3c82ccc663d0ec60916bc 336 SMART SM00702 160 323 3.3E-4 T 19-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 APA12_RS03735 ae599f03a65bc7e749581e5bb8f03d3a 634 Pfam PF08676 MutL C terminal dimerisation domain 438 591 6.4E-44 T 19-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 APA12_RS03735 ae599f03a65bc7e749581e5bb8f03d3a 634 Gene3D G3DSA:3.30.565.10 12 210 9.7E-64 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS03735 ae599f03a65bc7e749581e5bb8f03d3a 634 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 101 107 - T 19-04-2016 IPR014762 DNA mismatch repair, conserved site APA12_RS03735 ae599f03a65bc7e749581e5bb8f03d3a 634 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 33 133 4.0E-10 T 19-04-2016 APA12_RS03735 ae599f03a65bc7e749581e5bb8f03d3a 634 SUPERFAMILY SSF118116 437 633 2.75E-55 T 19-04-2016 APA12_RS03735 ae599f03a65bc7e749581e5bb8f03d3a 634 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 11 312 6.3E-82 T 19-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 APA12_RS03735 ae599f03a65bc7e749581e5bb8f03d3a 634 Gene3D G3DSA:3.30.230.10 225 332 3.2E-31 T 19-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APA12_RS03735 ae599f03a65bc7e749581e5bb8f03d3a 634 SUPERFAMILY SSF55874 10 208 1.83E-47 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS03735 ae599f03a65bc7e749581e5bb8f03d3a 634 SMART SM00853 442 591 4.2E-49 T 19-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 APA12_RS03735 ae599f03a65bc7e749581e5bb8f03d3a 634 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 220 332 2.0E-32 T 19-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 APA12_RS03735 ae599f03a65bc7e749581e5bb8f03d3a 634 SMART SM01340 215 333 1.6E-46 T 19-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 APA12_RS03735 ae599f03a65bc7e749581e5bb8f03d3a 634 SUPERFAMILY SSF54211 203 333 7.59E-29 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APA12_RS03735 ae599f03a65bc7e749581e5bb8f03d3a 634 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 10 631 25.461 T 19-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 APA12_RS03735 ae599f03a65bc7e749581e5bb8f03d3a 634 PANTHER PTHR10073 12 634 2.3E-137 T 19-04-2016 APA12_RS01905 088673d37cf85c0deae9685128e418cc 313 Gene3D G3DSA:3.40.190.10 88 175 1.5E-21 T 19-04-2016 APA12_RS01905 088673d37cf85c0deae9685128e418cc 313 Gene3D G3DSA:1.10.10.10 1 78 2.6E-31 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS01905 088673d37cf85c0deae9685128e418cc 313 Gene3D G3DSA:3.40.190.10 176 266 5.3E-32 T 19-04-2016 APA12_RS01905 088673d37cf85c0deae9685128e418cc 313 Pfam PF03466 LysR substrate binding domain 87 294 3.0E-37 T 19-04-2016 IPR005119 LysR, substrate-binding APA12_RS01905 088673d37cf85c0deae9685128e418cc 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.0E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS01905 088673d37cf85c0deae9685128e418cc 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.0E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS01905 088673d37cf85c0deae9685128e418cc 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.0E-9 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS01905 088673d37cf85c0deae9685128e418cc 313 PANTHER PTHR30346 1 310 1.1E-90 T 19-04-2016 APA12_RS01905 088673d37cf85c0deae9685128e418cc 313 SUPERFAMILY SSF53850 88 297 6.76E-35 T 19-04-2016 APA12_RS01905 088673d37cf85c0deae9685128e418cc 313 PANTHER PTHR30346:SF6 1 310 1.1E-90 T 19-04-2016 APA12_RS01905 088673d37cf85c0deae9685128e418cc 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.3E-25 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS01905 088673d37cf85c0deae9685128e418cc 313 SUPERFAMILY SSF46785 1 85 2.34E-26 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS10000 7dc2c3128147e88cd2055ca2e876d70b 314 PANTHER PTHR30160 12 292 3.1E-31 T 19-04-2016 APA12_RS10000 7dc2c3128147e88cd2055ca2e876d70b 314 PANTHER PTHR30160:SF7 12 292 3.1E-31 T 19-04-2016 APA12_RS10000 7dc2c3128147e88cd2055ca2e876d70b 314 SUPERFAMILY SSF53756 12 310 1.73E-66 T 19-04-2016 APA12_RS10000 7dc2c3128147e88cd2055ca2e876d70b 314 Gene3D G3DSA:3.40.50.2000 12 150 2.4E-25 T 19-04-2016 APA12_RS10000 7dc2c3128147e88cd2055ca2e876d70b 314 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 80 292 7.2E-28 T 19-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 APA12_RS10000 7dc2c3128147e88cd2055ca2e876d70b 314 Gene3D G3DSA:3.40.50.2000 155 290 2.2E-39 T 19-04-2016 APA12_RS10450 6a924f12b0b8b13e03e5951a4730c6f6 463 SUPERFAMILY SSF53720 4 454 1.26E-139 T 19-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APA12_RS10450 6a924f12b0b8b13e03e5951a4730c6f6 463 Pfam PF00171 Aldehyde dehydrogenase family 3 452 5.0E-137 T 19-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APA12_RS10450 6a924f12b0b8b13e03e5951a4730c6f6 463 PANTHER PTHR11699:SF205 1 454 1.1E-246 T 19-04-2016 APA12_RS10450 6a924f12b0b8b13e03e5951a4730c6f6 463 Gene3D G3DSA:3.40.309.10 244 429 1.4E-56 T 19-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APA12_RS10450 6a924f12b0b8b13e03e5951a4730c6f6 463 Gene3D G3DSA:3.40.605.10 4 243 1.0E-75 T 19-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APA12_RS10450 6a924f12b0b8b13e03e5951a4730c6f6 463 PANTHER PTHR11699 1 454 1.1E-246 T 19-04-2016 APA12_RS10690 4f4ca5aa74cb928d4849d8c75aeae1c3 298 Pfam PF03466 LysR substrate binding domain 90 285 3.3E-25 T 19-04-2016 IPR005119 LysR, substrate-binding APA12_RS10690 4f4ca5aa74cb928d4849d8c75aeae1c3 298 Gene3D G3DSA:3.40.190.10 91 174 2.0E-11 T 19-04-2016 APA12_RS10690 4f4ca5aa74cb928d4849d8c75aeae1c3 298 Gene3D G3DSA:1.10.10.10 1 82 2.9E-23 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS10690 4f4ca5aa74cb928d4849d8c75aeae1c3 298 Gene3D G3DSA:3.40.190.10 175 260 1.9E-10 T 19-04-2016 APA12_RS10690 4f4ca5aa74cb928d4849d8c75aeae1c3 298 SUPERFAMILY SSF53850 91 288 1.16E-22 T 19-04-2016 APA12_RS10690 4f4ca5aa74cb928d4849d8c75aeae1c3 298 SUPERFAMILY SSF46785 3 82 2.37E-18 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS10690 4f4ca5aa74cb928d4849d8c75aeae1c3 298 PANTHER PTHR30419 1 259 1.3E-53 T 19-04-2016 APA12_RS10690 4f4ca5aa74cb928d4849d8c75aeae1c3 298 PANTHER PTHR30419:SF4 1 259 1.3E-53 T 19-04-2016 APA12_RS10690 4f4ca5aa74cb928d4849d8c75aeae1c3 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.2E-8 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS10690 4f4ca5aa74cb928d4849d8c75aeae1c3 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.2E-8 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS10690 4f4ca5aa74cb928d4849d8c75aeae1c3 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.2E-8 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS10690 4f4ca5aa74cb928d4849d8c75aeae1c3 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.1E-16 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS04930 53e1bf2deddd0152bc2086501fe5f257 397 Gene3D G3DSA:1.10.3090.10 148 360 2.5E-40 T 19-04-2016 APA12_RS04930 53e1bf2deddd0152bc2086501fe5f257 397 PANTHER PTHR13734 26 235 2.8E-60 T 19-04-2016 APA12_RS04930 53e1bf2deddd0152bc2086501fe5f257 397 PANTHER PTHR13734:SF5 26 235 2.8E-60 T 19-04-2016 APA12_RS04930 53e1bf2deddd0152bc2086501fe5f257 397 Gene3D G3DSA:3.30.460.10 25 145 1.0E-38 T 19-04-2016 APA12_RS04930 53e1bf2deddd0152bc2086501fe5f257 397 SUPERFAMILY SSF81891 148 390 1.57E-46 T 19-04-2016 APA12_RS04930 53e1bf2deddd0152bc2086501fe5f257 397 SUPERFAMILY SSF81301 17 146 2.62E-37 T 19-04-2016 APA12_RS04930 53e1bf2deddd0152bc2086501fe5f257 397 Pfam PF01743 Poly A polymerase head domain 27 149 4.4E-29 T 19-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 APA12_RS04930 53e1bf2deddd0152bc2086501fe5f257 397 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 183 236 1.1E-10 T 19-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain APA12_RS01105 b875e0cea308a67c40424f129b1b6f61 386 SUPERFAMILY SSF51713 2 361 2.22E-147 T 19-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APA12_RS01105 b875e0cea308a67c40424f129b1b6f61 386 Gene3D G3DSA:3.20.20.105 2 363 1.1E-147 T 19-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APA12_RS01105 b875e0cea308a67c40424f129b1b6f61 386 Pfam PF01702 Queuine tRNA-ribosyltransferase 130 361 3.0E-79 T 19-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APA12_RS01105 b875e0cea308a67c40424f129b1b6f61 386 PANTHER PTHR21148:SF26 1 370 5.9E-152 T 19-04-2016 APA12_RS01105 b875e0cea308a67c40424f129b1b6f61 386 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 4 361 53.139 T 19-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APA12_RS01105 b875e0cea308a67c40424f129b1b6f61 386 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 7 364 1.0E-143 T 19-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APA12_RS01105 b875e0cea308a67c40424f129b1b6f61 386 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 7 363 2.5E-138 T 19-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APA12_RS01105 b875e0cea308a67c40424f129b1b6f61 386 PANTHER PTHR21148 1 370 5.9E-152 T 19-04-2016 APA12_RS11900 5ab366a9902dbbfd1eb3cff0fa973f22 161 Pfam PF05194 UreE urease accessory protein, C-terminal domain 75 160 1.1E-25 T 19-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 APA12_RS11900 5ab366a9902dbbfd1eb3cff0fa973f22 161 SUPERFAMILY SSF69737 74 141 1.09E-20 T 19-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 APA12_RS11900 5ab366a9902dbbfd1eb3cff0fa973f22 161 SMART SM00988 4 68 4.6E-11 T 19-04-2016 IPR004029 UreE urease accessory, N-terminal APA12_RS11900 5ab366a9902dbbfd1eb3cff0fa973f22 161 Pfam PF02814 UreE urease accessory protein, N-terminal domain 25 68 1.6E-10 T 19-04-2016 IPR004029 UreE urease accessory, N-terminal APA12_RS11900 5ab366a9902dbbfd1eb3cff0fa973f22 161 Gene3D G3DSA:2.60.260.20 25 71 6.2E-6 T 19-04-2016 APA12_RS11900 5ab366a9902dbbfd1eb3cff0fa973f22 161 Hamap MF_00822 Urease accessory protein UreE [ureE]. 2 142 20.442 T 19-04-2016 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 APA12_RS11900 5ab366a9902dbbfd1eb3cff0fa973f22 161 SUPERFAMILY SSF69287 1 71 1.83E-10 T 19-04-2016 IPR004029 UreE urease accessory, N-terminal APA12_RS11900 5ab366a9902dbbfd1eb3cff0fa973f22 161 PIRSF PIRSF036402 1 161 5.9E-34 T 19-04-2016 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 APA12_RS11900 5ab366a9902dbbfd1eb3cff0fa973f22 161 Gene3D G3DSA:3.30.70.790 75 144 6.9E-28 T 19-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 APA12_RS00245 d0fff07e8e756c0765ddfe99bf0523a1 367 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 35 361 5.9E-72 T 19-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 APA12_RS00245 d0fff07e8e756c0765ddfe99bf0523a1 367 PANTHER PTHR11113 37 366 3.7E-119 T 19-04-2016 APA12_RS00245 d0fff07e8e756c0765ddfe99bf0523a1 367 SUPERFAMILY SSF51556 42 336 7.41E-83 T 19-04-2016 IPR032466 Metal-dependent hydrolase APA12_RS00245 d0fff07e8e756c0765ddfe99bf0523a1 367 PANTHER PTHR11113:SF7 37 366 3.7E-119 T 19-04-2016 APA12_RS00245 d0fff07e8e756c0765ddfe99bf0523a1 367 PIRSF PIRSF038994 7 367 1.3E-99 T 19-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 APA12_RS00245 d0fff07e8e756c0765ddfe99bf0523a1 367 Gene3D G3DSA:3.20.20.140 43 319 8.4E-91 T 19-04-2016 APA12_RS00245 d0fff07e8e756c0765ddfe99bf0523a1 367 Gene3D G3DSA:2.30.40.10 320 366 1.1E-10 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APA12_RS00245 d0fff07e8e756c0765ddfe99bf0523a1 367 SUPERFAMILY SSF51338 337 366 7.46E-8 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APA12_RS00245 d0fff07e8e756c0765ddfe99bf0523a1 367 Pfam PF01979 Amidohydrolase family 38 364 6.0E-21 T 19-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APA12_RS04380 007da5b382e255193b02fd40fb12a3d0 482 Gene3D G3DSA:1.20.200.10 124 390 2.4E-103 T 19-04-2016 APA12_RS04380 007da5b382e255193b02fd40fb12a3d0 482 PRINTS PR00145 Argininosuccinate lyase family signature 327 346 8.2E-66 T 19-04-2016 APA12_RS04380 007da5b382e255193b02fd40fb12a3d0 482 PRINTS PR00145 Argininosuccinate lyase family signature 159 179 8.2E-66 T 19-04-2016 APA12_RS04380 007da5b382e255193b02fd40fb12a3d0 482 PRINTS PR00145 Argininosuccinate lyase family signature 248 272 8.2E-66 T 19-04-2016 APA12_RS04380 007da5b382e255193b02fd40fb12a3d0 482 PRINTS PR00145 Argininosuccinate lyase family signature 118 140 8.2E-66 T 19-04-2016 APA12_RS04380 007da5b382e255193b02fd40fb12a3d0 482 PRINTS PR00145 Argininosuccinate lyase family signature 210 226 8.2E-66 T 19-04-2016 APA12_RS04380 007da5b382e255193b02fd40fb12a3d0 482 PRINTS PR00145 Argininosuccinate lyase family signature 292 308 8.2E-66 T 19-04-2016 APA12_RS04380 007da5b382e255193b02fd40fb12a3d0 482 Pfam PF14698 Argininosuccinate lyase C-terminal 380 449 1.0E-22 T 19-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APA12_RS04380 007da5b382e255193b02fd40fb12a3d0 482 ProSitePatterns PS00163 Fumarate lyases signature. 292 301 - T 19-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 APA12_RS04380 007da5b382e255193b02fd40fb12a3d0 482 PANTHER PTHR11444 21 473 8.8E-223 T 19-04-2016 IPR000362 Fumarate lyase family APA12_RS04380 007da5b382e255193b02fd40fb12a3d0 482 Gene3D G3DSA:1.10.40.30 391 448 9.0E-27 T 19-04-2016 APA12_RS04380 007da5b382e255193b02fd40fb12a3d0 482 Gene3D G3DSA:1.10.275.10 21 123 1.8E-39 T 19-04-2016 IPR024083 Fumarase/histidase, N-terminal APA12_RS04380 007da5b382e255193b02fd40fb12a3d0 482 TIGRFAM TIGR00838 argH: argininosuccinate lyase 21 465 5.4E-180 T 19-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APA12_RS04380 007da5b382e255193b02fd40fb12a3d0 482 PANTHER PTHR11444:SF3 21 473 8.8E-223 T 19-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APA12_RS04380 007da5b382e255193b02fd40fb12a3d0 482 PRINTS PR00149 Fumarate lyase superfamily signature 119 137 8.5E-31 T 19-04-2016 IPR000362 Fumarate lyase family APA12_RS04380 007da5b382e255193b02fd40fb12a3d0 482 PRINTS PR00149 Fumarate lyase superfamily signature 248 275 8.5E-31 T 19-04-2016 IPR000362 Fumarate lyase family APA12_RS04380 007da5b382e255193b02fd40fb12a3d0 482 PRINTS PR00149 Fumarate lyase superfamily signature 164 182 8.5E-31 T 19-04-2016 IPR000362 Fumarate lyase family APA12_RS04380 007da5b382e255193b02fd40fb12a3d0 482 PRINTS PR00149 Fumarate lyase superfamily signature 292 308 8.5E-31 T 19-04-2016 IPR000362 Fumarate lyase family APA12_RS04380 007da5b382e255193b02fd40fb12a3d0 482 Pfam PF00206 Lyase 23 317 1.6E-78 T 19-04-2016 IPR022761 Fumarate lyase, N-terminal APA12_RS04380 007da5b382e255193b02fd40fb12a3d0 482 Hamap MF_00006 Argininosuccinate lyase [argH]. 19 471 41.849 T 19-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APA12_RS04380 007da5b382e255193b02fd40fb12a3d0 482 SUPERFAMILY SSF48557 23 474 1.48E-147 T 19-04-2016 IPR008948 L-Aspartase-like GO:0003824 APA12_RS02345 f9df61a60da81bd2ba83ba1173a0f1ab 153 PANTHER PTHR11908:SF66 3 135 1.7E-28 T 19-04-2016 APA12_RS02345 f9df61a60da81bd2ba83ba1173a0f1ab 153 SUPERFAMILY SSF47741 84 151 1.44E-29 T 19-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 APA12_RS02345 f9df61a60da81bd2ba83ba1173a0f1ab 153 Gene3D G3DSA:1.10.150.120 84 151 1.8E-28 T 19-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 APA12_RS02345 f9df61a60da81bd2ba83ba1173a0f1ab 153 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 56 2.1E-7 T 19-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APA12_RS02345 f9df61a60da81bd2ba83ba1173a0f1ab 153 Gene3D G3DSA:3.10.20.30 3 75 9.0E-25 T 19-04-2016 IPR012675 Beta-grasp domain APA12_RS02345 f9df61a60da81bd2ba83ba1173a0f1ab 153 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 19-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 APA12_RS02345 f9df61a60da81bd2ba83ba1173a0f1ab 153 PANTHER PTHR11908 3 135 1.7E-28 T 19-04-2016 APA12_RS02345 f9df61a60da81bd2ba83ba1173a0f1ab 153 Pfam PF01799 [2Fe-2S] binding domain 73 145 8.7E-25 T 19-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 APA12_RS02345 f9df61a60da81bd2ba83ba1173a0f1ab 153 SUPERFAMILY SSF54292 3 76 5.24E-23 T 19-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APA12_RS12695 64b3afaa83d584663fe52ac175621ac1 216 Gene3D G3DSA:3.30.1330.30 100 180 1.8E-4 T 19-04-2016 IPR029064 50S ribosomal protein L30e-like APA12_RS12695 64b3afaa83d584663fe52ac175621ac1 216 Gene3D G3DSA:3.30.1230.10 10 99 4.4E-25 T 19-04-2016 IPR007393 Domain of unknown function DUF448 APA12_RS12695 64b3afaa83d584663fe52ac175621ac1 216 PANTHER PTHR34215 15 210 6.2E-19 T 19-04-2016 APA12_RS12695 64b3afaa83d584663fe52ac175621ac1 216 Pfam PF04296 Protein of unknown function (DUF448) 16 91 5.0E-19 T 19-04-2016 IPR007393 Domain of unknown function DUF448 APA12_RS12695 64b3afaa83d584663fe52ac175621ac1 216 SUPERFAMILY SSF64376 13 99 5.75E-21 T 19-04-2016 IPR007393 Domain of unknown function DUF448 APA12_RS12695 64b3afaa83d584663fe52ac175621ac1 216 SUPERFAMILY SSF55315 98 184 2.36E-10 T 19-04-2016 IPR029064 50S ribosomal protein L30e-like APA12_RS12695 64b3afaa83d584663fe52ac175621ac1 216 PANTHER PTHR34215:SF1 15 210 6.2E-19 T 19-04-2016 APA12_RS12695 64b3afaa83d584663fe52ac175621ac1 216 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 98 175 3.5E-5 T 19-04-2016 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 APA12_RS12425 7a76ae95079b84e924122b5ae6d78643 487 SUPERFAMILY SSF111369 107 163 4.97E-5 T 19-04-2016 APA12_RS12425 7a76ae95079b84e924122b5ae6d78643 487 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 337 358 2.7E-20 T 19-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APA12_RS12425 7a76ae95079b84e924122b5ae6d78643 487 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 115 135 2.7E-20 T 19-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APA12_RS12425 7a76ae95079b84e924122b5ae6d78643 487 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 451 466 2.7E-20 T 19-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APA12_RS12425 7a76ae95079b84e924122b5ae6d78643 487 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 466 486 2.7E-20 T 19-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APA12_RS12425 7a76ae95079b84e924122b5ae6d78643 487 Pfam PF13437 HlyD family secretion protein 325 415 1.4E-6 T 19-04-2016 APA12_RS12425 7a76ae95079b84e924122b5ae6d78643 487 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 64 486 1.3E-95 T 19-04-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 APA12_RS12425 7a76ae95079b84e924122b5ae6d78643 487 Pfam PF13533 Biotin-lipoyl like 114 140 6.3E-6 T 19-04-2016 APA12_RS12425 7a76ae95079b84e924122b5ae6d78643 487 PANTHER PTHR30386:SF4 64 158 9.1E-51 T 19-04-2016 APA12_RS12425 7a76ae95079b84e924122b5ae6d78643 487 PANTHER PTHR30386:SF4 184 487 9.1E-51 T 19-04-2016 APA12_RS12425 7a76ae95079b84e924122b5ae6d78643 487 PANTHER PTHR30386 64 158 9.1E-51 T 19-04-2016 APA12_RS12425 7a76ae95079b84e924122b5ae6d78643 487 PANTHER PTHR30386 184 487 9.1E-51 T 19-04-2016 APA12_RS12425 7a76ae95079b84e924122b5ae6d78643 487 Gene3D G3DSA:2.40.50.100 322 356 4.5E-9 T 19-04-2016 APA12_RS12425 7a76ae95079b84e924122b5ae6d78643 487 Gene3D G3DSA:2.40.50.100 107 137 4.5E-9 T 19-04-2016 APA12_RS05410 c71e05bdfacd3bfaf50fa5e4a04381ec 505 PANTHER PTHR21432:SF10 1 502 4.5E-239 T 19-04-2016 APA12_RS05410 c71e05bdfacd3bfaf50fa5e4a04381ec 505 SUPERFAMILY SSF100950 3 228 8.38E-62 T 19-04-2016 APA12_RS05410 c71e05bdfacd3bfaf50fa5e4a04381ec 505 SUPERFAMILY SSF100950 231 502 4.19E-79 T 19-04-2016 APA12_RS05410 c71e05bdfacd3bfaf50fa5e4a04381ec 505 Gene3D G3DSA:3.40.810.20 231 496 1.8E-65 T 19-04-2016 APA12_RS05410 c71e05bdfacd3bfaf50fa5e4a04381ec 505 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 12 221 2.9E-28 T 19-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 APA12_RS05410 c71e05bdfacd3bfaf50fa5e4a04381ec 505 Gene3D G3DSA:3.40.1080.10 10 226 8.3E-40 T 19-04-2016 APA12_RS05410 c71e05bdfacd3bfaf50fa5e4a04381ec 505 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 11 502 7.6E-222 T 19-04-2016 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 APA12_RS05410 c71e05bdfacd3bfaf50fa5e4a04381ec 505 PANTHER PTHR21432 1 502 4.5E-239 T 19-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 APA12_RS05410 c71e05bdfacd3bfaf50fa5e4a04381ec 505 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 330 469 9.1E-40 T 19-04-2016 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain APA12_RS13390 0962d8a9b9b7035786a2bb0bbd42a86c 89 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 7.8E-7 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APA12_RS13390 0962d8a9b9b7035786a2bb0bbd42a86c 89 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 7.8E-7 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APA12_RS13390 0962d8a9b9b7035786a2bb0bbd42a86c 89 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 7.8E-7 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APA12_RS13390 0962d8a9b9b7035786a2bb0bbd42a86c 89 SMART SM00411 1 89 2.4E-13 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APA12_RS13390 0962d8a9b9b7035786a2bb0bbd42a86c 89 SUPERFAMILY SSF47729 1 89 3.09E-22 T 19-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APA12_RS13390 0962d8a9b9b7035786a2bb0bbd42a86c 89 PANTHER PTHR33175 1 89 2.2E-19 T 19-04-2016 APA12_RS13390 0962d8a9b9b7035786a2bb0bbd42a86c 89 Gene3D G3DSA:4.10.520.10 1 89 1.8E-23 T 19-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APA12_RS13390 0962d8a9b9b7035786a2bb0bbd42a86c 89 Pfam PF00216 Bacterial DNA-binding protein 1 89 4.1E-24 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APA12_RS02130 41dd4b922e1939620fe0795740790172 719 Pfam PF07715 TonB-dependent Receptor Plug Domain 88 194 8.9E-22 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS02130 41dd4b922e1939620fe0795740790172 719 Gene3D G3DSA:2.40.170.20 197 718 3.7E-83 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS02130 41dd4b922e1939620fe0795740790172 719 Gene3D G3DSA:2.170.130.10 69 196 5.5E-31 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS02130 41dd4b922e1939620fe0795740790172 719 SUPERFAMILY SSF56935 75 719 3.05E-104 T 19-04-2016 APA12_RS02130 41dd4b922e1939620fe0795740790172 719 PANTHER PTHR32552 269 719 1.4E-37 T 19-04-2016 APA12_RS02130 41dd4b922e1939620fe0795740790172 719 PANTHER PTHR32552 12 251 1.4E-37 T 19-04-2016 APA12_RS02130 41dd4b922e1939620fe0795740790172 719 Pfam PF00593 TonB dependent receptor 483 717 6.1E-31 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS05375 f2cf6946fa0ed42090c1e47e61a79a83 289 SUPERFAMILY SSF53681 13 116 3.2E-24 T 19-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APA12_RS05375 f2cf6946fa0ed42090c1e47e61a79a83 289 PANTHER PTHR21198:SF2 7 234 4.9E-52 T 19-04-2016 APA12_RS05375 f2cf6946fa0ed42090c1e47e61a79a83 289 Pfam PF01177 Asp/Glu/Hydantoin racemase 19 228 1.7E-17 T 19-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APA12_RS05375 f2cf6946fa0ed42090c1e47e61a79a83 289 PANTHER PTHR21198 7 234 4.9E-52 T 19-04-2016 APA12_RS05375 f2cf6946fa0ed42090c1e47e61a79a83 289 SUPERFAMILY SSF53681 118 251 1.48E-21 T 19-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APA12_RS05375 f2cf6946fa0ed42090c1e47e61a79a83 289 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 79 87 - T 19-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APA12_RS05375 f2cf6946fa0ed42090c1e47e61a79a83 289 Hamap MF_00258 Glutamate racemase [murI]. 12 275 26.411 T 19-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APA12_RS05375 f2cf6946fa0ed42090c1e47e61a79a83 289 Gene3D G3DSA:3.40.50.1860 13 177 2.8E-37 T 19-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APA12_RS12740 4910cf3680b198679fcf9bdc3fe88615 897 PANTHER PTHR11670 13 396 0.0 T 19-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS12740 4910cf3680b198679fcf9bdc3fe88615 897 PANTHER PTHR11670 670 715 0.0 T 19-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS12740 4910cf3680b198679fcf9bdc3fe88615 897 PANTHER PTHR11670 418 654 0.0 T 19-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS12740 4910cf3680b198679fcf9bdc3fe88615 897 PANTHER PTHR11670 754 897 0.0 T 19-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS12740 4910cf3680b198679fcf9bdc3fe88615 897 Pfam PF00694 Aconitase C-terminal domain 695 822 1.5E-46 T 19-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS12740 4910cf3680b198679fcf9bdc3fe88615 897 ProSitePatterns PS00450 Aconitase family signature 1. 429 445 - T 19-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS12740 4910cf3680b198679fcf9bdc3fe88615 897 Gene3D G3DSA:3.30.499.10 371 577 4.9E-62 T 19-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS12740 4910cf3680b198679fcf9bdc3fe88615 897 SUPERFAMILY SSF52016 634 892 3.92E-91 T 19-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APA12_RS12740 4910cf3680b198679fcf9bdc3fe88615 897 ProSitePatterns PS01244 Aconitase family signature 2. 495 508 - T 19-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS12740 4910cf3680b198679fcf9bdc3fe88615 897 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 20 893 0.0 T 19-04-2016 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 APA12_RS12740 4910cf3680b198679fcf9bdc3fe88615 897 PRINTS PR00415 Aconitase family signature 433 444 2.1E-41 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS12740 4910cf3680b198679fcf9bdc3fe88615 897 PRINTS PR00415 Aconitase family signature 219 234 2.1E-41 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS12740 4910cf3680b198679fcf9bdc3fe88615 897 PRINTS PR00415 Aconitase family signature 205 218 2.1E-41 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS12740 4910cf3680b198679fcf9bdc3fe88615 897 PRINTS PR00415 Aconitase family signature 295 308 2.1E-41 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS12740 4910cf3680b198679fcf9bdc3fe88615 897 PRINTS PR00415 Aconitase family signature 172 180 2.1E-41 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS12740 4910cf3680b198679fcf9bdc3fe88615 897 PRINTS PR00415 Aconitase family signature 281 294 2.1E-41 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS12740 4910cf3680b198679fcf9bdc3fe88615 897 PRINTS PR00415 Aconitase family signature 148 161 2.1E-41 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS12740 4910cf3680b198679fcf9bdc3fe88615 897 PRINTS PR00415 Aconitase family signature 495 508 2.1E-41 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS12740 4910cf3680b198679fcf9bdc3fe88615 897 PRINTS PR00415 Aconitase family signature 375 389 2.1E-41 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS12740 4910cf3680b198679fcf9bdc3fe88615 897 Pfam PF00330 Aconitase family (aconitate hydratase) 79 564 6.6E-183 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS12740 4910cf3680b198679fcf9bdc3fe88615 897 Gene3D G3DSA:3.40.1060.10 252 370 2.8E-36 T 19-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS12740 4910cf3680b198679fcf9bdc3fe88615 897 PANTHER PTHR11670:SF1 13 396 0.0 T 19-04-2016 APA12_RS12740 4910cf3680b198679fcf9bdc3fe88615 897 PANTHER PTHR11670:SF1 670 715 0.0 T 19-04-2016 APA12_RS12740 4910cf3680b198679fcf9bdc3fe88615 897 PANTHER PTHR11670:SF1 418 654 0.0 T 19-04-2016 APA12_RS12740 4910cf3680b198679fcf9bdc3fe88615 897 PANTHER PTHR11670:SF1 754 897 0.0 T 19-04-2016 APA12_RS12740 4910cf3680b198679fcf9bdc3fe88615 897 Gene3D G3DSA:3.20.19.10 640 892 1.8E-81 T 19-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APA12_RS12740 4910cf3680b198679fcf9bdc3fe88615 897 Gene3D G3DSA:3.30.499.10 30 251 3.5E-73 T 19-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS12740 4910cf3680b198679fcf9bdc3fe88615 897 SUPERFAMILY SSF53732 8 628 3.14E-220 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS07005 8bf9ff8b9705cf22bd518b6fc6316e41 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 22 81 2.6E-15 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS07005 8bf9ff8b9705cf22bd518b6fc6316e41 313 Pfam PF03466 LysR substrate binding domain 104 303 8.9E-28 T 19-04-2016 IPR005119 LysR, substrate-binding APA12_RS07005 8bf9ff8b9705cf22bd518b6fc6316e41 313 Gene3D G3DSA:1.10.10.10 20 100 9.9E-19 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS07005 8bf9ff8b9705cf22bd518b6fc6316e41 313 Gene3D G3DSA:3.40.190.10 108 203 2.2E-13 T 19-04-2016 APA12_RS07005 8bf9ff8b9705cf22bd518b6fc6316e41 313 SUPERFAMILY SSF53850 105 304 1.25E-31 T 19-04-2016 APA12_RS07005 8bf9ff8b9705cf22bd518b6fc6316e41 313 PANTHER PTHR30579:SF3 15 304 1.0E-55 T 19-04-2016 APA12_RS07005 8bf9ff8b9705cf22bd518b6fc6316e41 313 SUPERFAMILY SSF46785 18 127 7.83E-19 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS07005 8bf9ff8b9705cf22bd518b6fc6316e41 313 PANTHER PTHR30579 15 304 1.0E-55 T 19-04-2016 APA12_RS03285 7d35bd5d7d1734fa5e3fa9c38d5f830c 245 Pfam PF00696 Amino acid kinase family 12 221 2.6E-30 T 19-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APA12_RS03285 7d35bd5d7d1734fa5e3fa9c38d5f830c 245 PANTHER PTHR21499 12 241 2.4E-106 T 19-04-2016 APA12_RS03285 7d35bd5d7d1734fa5e3fa9c38d5f830c 245 PANTHER PTHR21499:SF23 12 241 2.4E-106 T 19-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 APA12_RS03285 7d35bd5d7d1734fa5e3fa9c38d5f830c 245 Gene3D G3DSA:3.40.1160.10 8 241 2.0E-82 T 19-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APA12_RS03285 7d35bd5d7d1734fa5e3fa9c38d5f830c 245 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 12 241 4.9E-99 T 19-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 APA12_RS03285 7d35bd5d7d1734fa5e3fa9c38d5f830c 245 Hamap MF_01220_B Uridylate kinase [pyrH]. 9 242 43.219 T 19-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 APA12_RS03285 7d35bd5d7d1734fa5e3fa9c38d5f830c 245 SUPERFAMILY SSF53633 10 242 1.96E-68 T 19-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APA12_RS03285 7d35bd5d7d1734fa5e3fa9c38d5f830c 245 PIRSF PIRSF005650 7 245 4.9E-92 T 19-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 APA12_RS07665 9b4d1fadde9eddbe6e550ee26179aa08 371 PIRSF PIRSF013171 7 371 1.0E-90 T 19-04-2016 IPR009486 Purine nucleoside permease GO:0055085 APA12_RS07665 9b4d1fadde9eddbe6e550ee26179aa08 371 PANTHER PTHR38643 98 364 3.5E-42 T 19-04-2016 APA12_RS07665 9b4d1fadde9eddbe6e550ee26179aa08 371 Pfam PF06516 Purine nucleoside permease (NUP) 43 369 4.1E-109 T 19-04-2016 IPR009486 Purine nucleoside permease GO:0055085 APA12_RS09765 81fcc9ef5a755cd49b9f4c43a0e65ce3 571 PANTHER PTHR11709 8 210 6.0E-103 T 19-04-2016 APA12_RS09765 81fcc9ef5a755cd49b9f4c43a0e65ce3 571 PANTHER PTHR11709 254 367 6.0E-103 T 19-04-2016 APA12_RS09765 81fcc9ef5a755cd49b9f4c43a0e65ce3 571 PANTHER PTHR11709 424 570 6.0E-103 T 19-04-2016 APA12_RS09765 81fcc9ef5a755cd49b9f4c43a0e65ce3 571 Pfam PF00394 Multicopper oxidase 179 354 2.3E-29 T 19-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 APA12_RS09765 81fcc9ef5a755cd49b9f4c43a0e65ce3 571 PANTHER PTHR11709:SF33 8 210 6.0E-103 T 19-04-2016 APA12_RS09765 81fcc9ef5a755cd49b9f4c43a0e65ce3 571 PANTHER PTHR11709:SF33 254 367 6.0E-103 T 19-04-2016 APA12_RS09765 81fcc9ef5a755cd49b9f4c43a0e65ce3 571 PANTHER PTHR11709:SF33 424 570 6.0E-103 T 19-04-2016 APA12_RS09765 81fcc9ef5a755cd49b9f4c43a0e65ce3 571 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 10 403 3.0E-169 T 19-04-2016 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 APA12_RS09765 81fcc9ef5a755cd49b9f4c43a0e65ce3 571 SUPERFAMILY SSF49503 173 390 1.19E-54 T 19-04-2016 IPR008972 Cupredoxin APA12_RS09765 81fcc9ef5a755cd49b9f4c43a0e65ce3 571 Pfam PF07731 Multicopper oxidase 453 570 4.9E-25 T 19-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 APA12_RS09765 81fcc9ef5a755cd49b9f4c43a0e65ce3 571 Pfam PF07732 Multicopper oxidase 58 170 2.8E-41 T 19-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 APA12_RS09765 81fcc9ef5a755cd49b9f4c43a0e65ce3 571 Gene3D G3DSA:2.60.40.420 175 383 8.6E-47 T 19-04-2016 IPR008972 Cupredoxin APA12_RS09765 81fcc9ef5a755cd49b9f4c43a0e65ce3 571 SUPERFAMILY SSF49503 420 570 7.46E-37 T 19-04-2016 IPR008972 Cupredoxin APA12_RS09765 81fcc9ef5a755cd49b9f4c43a0e65ce3 571 SUPERFAMILY SSF49503 47 198 1.18E-39 T 19-04-2016 IPR008972 Cupredoxin APA12_RS09765 81fcc9ef5a755cd49b9f4c43a0e65ce3 571 ProSitePatterns PS00079 Multicopper oxidases signature 1. 144 164 - T 19-04-2016 IPR033138 Multicopper oxidases, conserved site APA12_RS09765 81fcc9ef5a755cd49b9f4c43a0e65ce3 571 Gene3D G3DSA:2.60.40.420 45 173 3.7E-34 T 19-04-2016 IPR008972 Cupredoxin APA12_RS09765 81fcc9ef5a755cd49b9f4c43a0e65ce3 571 ProSitePatterns PS00080 Multicopper oxidases signature 2. 553 564 - T 19-04-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 APA12_RS09765 81fcc9ef5a755cd49b9f4c43a0e65ce3 571 Gene3D G3DSA:2.60.40.420 450 570 4.2E-35 T 19-04-2016 IPR008972 Cupredoxin APA12_RS00260 0f1b33b7a61d411eb6e044892f1e3b7a 657 Pfam PF12362 DNA polymerase III gamma and tau subunits C terminal 501 614 6.3E-33 T 19-04-2016 IPR022107 DNA polymerase III, subunit gamma/ tau, C-terminal APA12_RS00260 0f1b33b7a61d411eb6e044892f1e3b7a 657 Gene3D G3DSA:1.10.8.60 219 289 1.5E-26 T 19-04-2016 APA12_RS00260 0f1b33b7a61d411eb6e044892f1e3b7a 657 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 50 417 5.9E-121 T 19-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 APA12_RS00260 0f1b33b7a61d411eb6e044892f1e3b7a 657 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 292 432 1.5E-47 T 19-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 APA12_RS00260 0f1b33b7a61d411eb6e044892f1e3b7a 657 PANTHER PTHR11669 24 431 4.0E-157 T 19-04-2016 APA12_RS00260 0f1b33b7a61d411eb6e044892f1e3b7a 657 Pfam PF13177 DNA polymerase III, delta subunit 67 229 3.5E-39 T 19-04-2016 APA12_RS00260 0f1b33b7a61d411eb6e044892f1e3b7a 657 SUPERFAMILY SSF52540 50 283 1.53E-54 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS00260 0f1b33b7a61d411eb6e044892f1e3b7a 657 PANTHER PTHR11669:SF0 24 431 4.0E-157 T 19-04-2016 APA12_RS00260 0f1b33b7a61d411eb6e044892f1e3b7a 657 Gene3D G3DSA:1.20.272.10 300 418 2.8E-28 T 19-04-2016 APA12_RS00260 0f1b33b7a61d411eb6e044892f1e3b7a 657 SUPERFAMILY SSF48019 301 427 3.15E-29 T 19-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 APA12_RS00260 0f1b33b7a61d411eb6e044892f1e3b7a 657 Gene3D G3DSA:3.40.50.300 62 218 2.5E-64 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS00260 0f1b33b7a61d411eb6e044892f1e3b7a 657 SMART SM00382 84 231 1.4E-9 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS04550 3f20859ea4ffb5655c8a55e4a10d53d2 139 SUPERFAMILY SSF88697 1 136 4.64E-54 T 19-04-2016 IPR015947 PUA-like domain APA12_RS04550 3f20859ea4ffb5655c8a55e4a10d53d2 139 Gene3D G3DSA:3.10.590.10 1 132 8.2E-29 T 19-04-2016 IPR002740 EVE domain APA12_RS04550 3f20859ea4ffb5655c8a55e4a10d53d2 139 Pfam PF01878 EVE domain 2 132 8.1E-49 T 19-04-2016 IPR002740 EVE domain APA12_RS04550 3f20859ea4ffb5655c8a55e4a10d53d2 139 PANTHER PTHR14087 1 134 1.2E-66 T 19-04-2016 APA12_RS11780 2a10b80c70efb46817d2538f16d1c353 588 PANTHER PTHR11689 116 582 2.1E-29 T 19-04-2016 APA12_RS11780 2a10b80c70efb46817d2538f16d1c353 588 Pfam PF00654 Voltage gated chloride channel 98 422 4.7E-52 T 19-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APA12_RS11780 2a10b80c70efb46817d2538f16d1c353 588 Pfam PF00571 CBS domain 523 570 2.6E-5 T 19-04-2016 IPR000644 CBS domain APA12_RS11780 2a10b80c70efb46817d2538f16d1c353 588 SUPERFAMILY SSF81340 16 443 8.11E-75 T 19-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 APA12_RS11780 2a10b80c70efb46817d2538f16d1c353 588 Gene3D G3DSA:3.10.580.10 451 572 3.5E-13 T 19-04-2016 APA12_RS11780 2a10b80c70efb46817d2538f16d1c353 588 SUPERFAMILY SSF54631 453 582 4.68E-16 T 19-04-2016 APA12_RS11780 2a10b80c70efb46817d2538f16d1c353 588 Gene3D G3DSA:1.10.3080.10 27 439 8.1E-46 T 19-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 APA12_RS03230 e600978db1faf86724e2ca8cf6c037db 445 PANTHER PTHR24031 1 439 7.7E-183 T 19-04-2016 APA12_RS03230 e600978db1faf86724e2ca8cf6c037db 445 PANTHER PTHR24031:SF261 1 439 7.7E-183 T 19-04-2016 APA12_RS03230 e600978db1faf86724e2ca8cf6c037db 445 SUPERFAMILY SSF52540 75 362 7.78E-73 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS03230 e600978db1faf86724e2ca8cf6c037db 445 Pfam PF00271 Helicase conserved C-terminal domain 233 341 2.0E-26 T 19-04-2016 IPR001650 Helicase, C-terminal APA12_RS03230 e600978db1faf86724e2ca8cf6c037db 445 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 19-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site APA12_RS03230 e600978db1faf86724e2ca8cf6c037db 445 SMART SM00490 260 341 4.0E-33 T 19-04-2016 IPR001650 Helicase, C-terminal APA12_RS03230 e600978db1faf86724e2ca8cf6c037db 445 Gene3D G3DSA:3.40.50.300 1 212 5.3E-81 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS03230 e600978db1faf86724e2ca8cf6c037db 445 SMART SM00487 21 223 6.3E-61 T 19-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APA12_RS03230 e600978db1faf86724e2ca8cf6c037db 445 Gene3D G3DSA:3.40.50.300 213 373 2.0E-52 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS03230 e600978db1faf86724e2ca8cf6c037db 445 Pfam PF00270 DEAD/DEAH box helicase 26 197 2.4E-47 T 19-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APA12_RS11650 1958213d9421e966de575e3300c9dcd4 530 Pfam PF02652 L-lactate permease 15 524 1.5E-123 T 19-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 APA12_RS11650 1958213d9421e966de575e3300c9dcd4 530 PANTHER PTHR30003:SF0 1 529 1.2E-161 T 19-04-2016 APA12_RS11650 1958213d9421e966de575e3300c9dcd4 530 PANTHER PTHR30003 1 529 1.2E-161 T 19-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 APA12_RS11650 1958213d9421e966de575e3300c9dcd4 530 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 14 525 1.6E-120 T 19-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 APA12_RS11015 c8315d99c7e6c847db16debabc850671 407 PANTHER PTHR30618 1 392 1.4E-122 T 19-04-2016 APA12_RS11015 c8315d99c7e6c847db16debabc850671 407 PANTHER PTHR30618:SF6 1 392 1.4E-122 T 19-04-2016 APA12_RS11015 c8315d99c7e6c847db16debabc850671 407 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 4 364 8.8E-69 T 19-04-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 APA12_RS08675 a980ea43f5a7b17acb0ae1a1f33535a1 467 Gene3D G3DSA:3.30.499.10 295 304 1.4E-62 T 19-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS08675 a980ea43f5a7b17acb0ae1a1f33535a1 467 Gene3D G3DSA:3.30.499.10 336 466 1.4E-62 T 19-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS08675 a980ea43f5a7b17acb0ae1a1f33535a1 467 ProSitePatterns PS01244 Aconitase family signature 2. 400 413 - T 19-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS08675 a980ea43f5a7b17acb0ae1a1f33535a1 467 SUPERFAMILY SSF53732 3 466 1.1E-167 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS08675 a980ea43f5a7b17acb0ae1a1f33535a1 467 Gene3D G3DSA:3.40.1060.10 167 280 1.2E-38 T 19-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS08675 a980ea43f5a7b17acb0ae1a1f33535a1 467 PRINTS PR00415 Aconitase family signature 83 96 6.9E-51 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS08675 a980ea43f5a7b17acb0ae1a1f33535a1 467 PRINTS PR00415 Aconitase family signature 400 413 6.9E-51 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS08675 a980ea43f5a7b17acb0ae1a1f33535a1 467 PRINTS PR00415 Aconitase family signature 120 133 6.9E-51 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS08675 a980ea43f5a7b17acb0ae1a1f33535a1 467 PRINTS PR00415 Aconitase family signature 196 209 6.9E-51 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS08675 a980ea43f5a7b17acb0ae1a1f33535a1 467 PRINTS PR00415 Aconitase family signature 134 149 6.9E-51 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS08675 a980ea43f5a7b17acb0ae1a1f33535a1 467 PRINTS PR00415 Aconitase family signature 344 355 6.9E-51 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS08675 a980ea43f5a7b17acb0ae1a1f33535a1 467 PRINTS PR00415 Aconitase family signature 287 301 6.9E-51 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS08675 a980ea43f5a7b17acb0ae1a1f33535a1 467 PRINTS PR00415 Aconitase family signature 210 223 6.9E-51 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS08675 a980ea43f5a7b17acb0ae1a1f33535a1 467 PRINTS PR00415 Aconitase family signature 109 117 6.9E-51 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS08675 a980ea43f5a7b17acb0ae1a1f33535a1 467 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 3 466 5.9E-240 T 19-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS08675 a980ea43f5a7b17acb0ae1a1f33535a1 467 ProSitePatterns PS00450 Aconitase family signature 1. 340 356 - T 19-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS08675 a980ea43f5a7b17acb0ae1a1f33535a1 467 Pfam PF00330 Aconitase family (aconitate hydratase) 8 458 8.4E-158 T 19-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS08675 a980ea43f5a7b17acb0ae1a1f33535a1 467 Gene3D G3DSA:3.30.499.10 3 159 6.0E-27 T 19-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS08675 a980ea43f5a7b17acb0ae1a1f33535a1 467 PANTHER PTHR11670:SF38 3 308 1.6E-302 T 19-04-2016 APA12_RS08675 a980ea43f5a7b17acb0ae1a1f33535a1 467 PANTHER PTHR11670:SF38 328 466 1.6E-302 T 19-04-2016 APA12_RS08675 a980ea43f5a7b17acb0ae1a1f33535a1 467 PANTHER PTHR11670 3 308 1.6E-302 T 19-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS08675 a980ea43f5a7b17acb0ae1a1f33535a1 467 PANTHER PTHR11670 328 466 1.6E-302 T 19-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS08675 a980ea43f5a7b17acb0ae1a1f33535a1 467 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 467 60.207 T 19-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS04535 91b6b638d653ad29c720c7d6239ef365 176 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 1 142 31.006 T 19-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 APA12_RS04535 91b6b638d653ad29c720c7d6239ef365 176 Gene3D G3DSA:2.40.50.140 25 126 9.9E-34 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS04535 91b6b638d653ad29c720c7d6239ef365 176 Pfam PF03100 CcmE 3 132 1.0E-44 T 19-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 APA12_RS04535 91b6b638d653ad29c720c7d6239ef365 176 PANTHER PTHR34128 3 169 6.8E-53 T 19-04-2016 APA12_RS04535 91b6b638d653ad29c720c7d6239ef365 176 SUPERFAMILY SSF82093 29 138 1.31E-35 T 19-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 APA12_RS00175 1c9e14c6cf0774a959a5a36a7d2fd6cc 220 Gene3D G3DSA:3.90.190.10 20 168 4.2E-24 T 19-04-2016 IPR029021 Protein-tyrosine phosphatase-like APA12_RS00175 1c9e14c6cf0774a959a5a36a7d2fd6cc 220 Pfam PF13350 Tyrosine phosphatase family 35 152 4.9E-6 T 19-04-2016 IPR026893 Tyrosine/serine-protein phosphatase IphP-type APA12_RS00175 1c9e14c6cf0774a959a5a36a7d2fd6cc 220 SUPERFAMILY SSF52799 27 195 2.26E-23 T 19-04-2016 IPR029021 Protein-tyrosine phosphatase-like APA12_RS12460 e81969291afbabebe6a81d54dc87a3c0 232 Gene3D G3DSA:3.40.50.10610 39 212 1.1E-13 T 19-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component APA12_RS12460 e81969291afbabebe6a81d54dc87a3c0 232 SUPERFAMILY SSF159594 44 213 9.15E-18 T 19-04-2016 APA12_RS12460 e81969291afbabebe6a81d54dc87a3c0 232 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 46 204 7.7E-26 T 19-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component APA12_RS02060 5b3e3c9e1eaac47fdbb28e6bdc27bc21 268 Gene3D G3DSA:3.40.50.300 45 249 2.6E-41 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS02060 5b3e3c9e1eaac47fdbb28e6bdc27bc21 268 PANTHER PTHR24220 38 248 2.7E-79 T 19-04-2016 APA12_RS02060 5b3e3c9e1eaac47fdbb28e6bdc27bc21 268 Pfam PF00005 ABC transporter 52 183 2.3E-17 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS02060 5b3e3c9e1eaac47fdbb28e6bdc27bc21 268 SUPERFAMILY SSF52540 49 246 2.61E-40 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS02060 5b3e3c9e1eaac47fdbb28e6bdc27bc21 268 PANTHER PTHR24220:SF476 38 248 2.7E-79 T 19-04-2016 APA12_RS02060 5b3e3c9e1eaac47fdbb28e6bdc27bc21 268 SMART SM00382 61 233 1.0E-11 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS02060 5b3e3c9e1eaac47fdbb28e6bdc27bc21 268 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APA12_RS03695 7c55bd132f22fc4a96d774ef70e1f736 85 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 77 20.232 T 19-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 APA12_RS03695 7c55bd132f22fc4a96d774ef70e1f736 85 Pfam PF02416 mttA/Hcf106 family 4 48 3.5E-9 T 19-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 APA12_RS03695 7c55bd132f22fc4a96d774ef70e1f736 85 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 3.5E-19 T 19-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 APA12_RS07255 0d29a503097d99babf8998872a53d276 275 SUPERFAMILY SSF53098 113 269 1.39E-39 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS07255 0d29a503097d99babf8998872a53d276 275 Gene3D G3DSA:3.30.420.10 113 268 2.8E-48 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS07255 0d29a503097d99babf8998872a53d276 275 PANTHER PTHR32552 27 268 1.3E-65 T 19-04-2016 APA12_RS07255 0d29a503097d99babf8998872a53d276 275 PANTHER PTHR32552:SF26 27 268 1.3E-65 T 19-04-2016 APA12_RS07255 0d29a503097d99babf8998872a53d276 275 Pfam PF00665 Integrase core domain 118 230 8.2E-27 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APA12_RS06895 4e71435c2b476d71c6d29861493668e1 316 Pfam PF09084 NMT1/THI5 like 76 242 3.4E-11 T 19-04-2016 IPR015168 SsuA/THI5-like APA12_RS06895 4e71435c2b476d71c6d29861493668e1 316 SUPERFAMILY SSF53850 32 263 3.26E-42 T 19-04-2016 APA12_RS06895 4e71435c2b476d71c6d29861493668e1 316 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 35 312 5.8E-68 T 19-04-2016 IPR010067 Aliphatic sulfonates-binding protein GO:0006790|GO:0006810|GO:0016020 APA12_RS06895 4e71435c2b476d71c6d29861493668e1 316 SMART SM00062 34 256 5.3E-5 T 19-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APA12_RS06895 4e71435c2b476d71c6d29861493668e1 316 PANTHER PTHR30024:SF11 1 311 3.8E-91 T 19-04-2016 APA12_RS06895 4e71435c2b476d71c6d29861493668e1 316 Gene3D G3DSA:3.40.190.10 120 238 3.0E-24 T 19-04-2016 APA12_RS06895 4e71435c2b476d71c6d29861493668e1 316 PANTHER PTHR30024 1 311 3.8E-91 T 19-04-2016 APA12_RS05650 843f60d1962f522d43c375e060272192 338 Gene3D G3DSA:3.20.20.70 5 313 2.3E-69 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS05650 843f60d1962f522d43c375e060272192 338 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 5 338 37.746 T 19-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 APA12_RS05650 843f60d1962f522d43c375e060272192 338 Pfam PF04055 Radical SAM superfamily 18 184 3.0E-25 T 19-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APA12_RS05650 843f60d1962f522d43c375e060272192 338 SMART SM00729 14 223 5.9E-8 T 19-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APA12_RS05650 843f60d1962f522d43c375e060272192 338 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 20 31 - T 19-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 APA12_RS05650 843f60d1962f522d43c375e060272192 338 SUPERFAMILY SSF102114 5 292 2.62E-73 T 19-04-2016 APA12_RS05650 843f60d1962f522d43c375e060272192 338 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 5 338 4.1E-103 T 19-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 APA12_RS05650 843f60d1962f522d43c375e060272192 338 PANTHER PTHR22960 5 288 2.2E-95 T 19-04-2016 APA12_RS05650 843f60d1962f522d43c375e060272192 338 Pfam PF06463 Molybdenum Cofactor Synthesis C 191 316 3.2E-37 T 19-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 APA12_RS05650 843f60d1962f522d43c375e060272192 338 Pfam PF13353 4Fe-4S single cluster domain 21 116 1.7E-6 T 19-04-2016 APA12_RS12035 6b5a3606d23042478d0df7e06899ec7d 529 PANTHER PTHR37944 103 515 7.7E-49 T 19-04-2016 APA12_RS12035 6b5a3606d23042478d0df7e06899ec7d 529 Pfam PF04966 Carbohydrate-selective porin, OprB family 141 510 4.8E-40 T 19-04-2016 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 APA12_RS12680 4857e6330187086ad59f367088b6a1b2 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 2.0E-14 T 19-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APA12_RS12680 4857e6330187086ad59f367088b6a1b2 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 2.0E-14 T 19-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APA12_RS12680 4857e6330187086ad59f367088b6a1b2 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 2.0E-14 T 19-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APA12_RS12680 4857e6330187086ad59f367088b6a1b2 150 SMART SM00344 3 111 4.8E-32 T 19-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 APA12_RS12680 4857e6330187086ad59f367088b6a1b2 150 ProSitePatterns PS00519 AsnC-type HTH domain signature. 20 46 - T 19-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site APA12_RS12680 4857e6330187086ad59f367088b6a1b2 150 Gene3D G3DSA:3.30.70.920 62 139 3.7E-27 T 19-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APA12_RS12680 4857e6330187086ad59f367088b6a1b2 150 Gene3D G3DSA:1.10.10.10 3 54 1.1E-21 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS12680 4857e6330187086ad59f367088b6a1b2 150 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 48 1.8E-15 T 19-04-2016 APA12_RS12680 4857e6330187086ad59f367088b6a1b2 150 SUPERFAMILY SSF54909 65 145 1.61E-18 T 19-04-2016 IPR011008 Dimeric alpha-beta barrel APA12_RS12680 4857e6330187086ad59f367088b6a1b2 150 SUPERFAMILY SSF46785 3 58 5.94E-14 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS12680 4857e6330187086ad59f367088b6a1b2 150 Pfam PF01037 Lrp/AsnC ligand binding domain 68 141 3.0E-23 T 19-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APA12_RS12680 4857e6330187086ad59f367088b6a1b2 150 PANTHER PTHR30154:SF15 3 144 5.8E-56 T 19-04-2016 APA12_RS12680 4857e6330187086ad59f367088b6a1b2 150 PANTHER PTHR30154 3 144 5.8E-56 T 19-04-2016 APA12_RS04975 1558f212cbd8e9ad67ddc3475dafdfd3 398 PANTHER PTHR10314 1 353 4.1E-138 T 19-04-2016 APA12_RS04975 1558f212cbd8e9ad67ddc3475dafdfd3 398 SUPERFAMILY SSF53686 3 308 3.27E-87 T 19-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APA12_RS04975 1558f212cbd8e9ad67ddc3475dafdfd3 398 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 21 390 2.6E-119 T 19-04-2016 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00052 APA12_RS04975 1558f212cbd8e9ad67ddc3475dafdfd3 398 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 16 301 1.3E-70 T 19-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APA12_RS04975 1558f212cbd8e9ad67ddc3475dafdfd3 398 Gene3D G3DSA:3.30.70.260 324 388 1.1E-9 T 19-04-2016 APA12_RS04975 1558f212cbd8e9ad67ddc3475dafdfd3 398 PANTHER PTHR10314:SF17 1 353 4.1E-138 T 19-04-2016 APA12_RS04975 1558f212cbd8e9ad67ddc3475dafdfd3 398 SUPERFAMILY SSF55021 325 381 5.89E-8 T 19-04-2016 APA12_RS04975 1558f212cbd8e9ad67ddc3475dafdfd3 398 Gene3D G3DSA:3.40.50.1100 69 318 1.0E-61 T 19-04-2016 APA12_RS00995 3618f2fcb17da83c631ea1d286725a57 286 PANTHER PTHR31480 11 271 3.6E-53 T 19-04-2016 APA12_RS00995 3618f2fcb17da83c631ea1d286725a57 286 Pfam PF00494 Squalene/phytoene synthase 19 271 8.7E-47 T 19-04-2016 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 APA12_RS00995 3618f2fcb17da83c631ea1d286725a57 286 SUPERFAMILY SSF48576 20 284 2.16E-49 T 19-04-2016 IPR008949 Isoprenoid synthase domain APA12_RS00995 3618f2fcb17da83c631ea1d286725a57 286 Gene3D G3DSA:1.10.600.10 22 281 1.3E-42 T 19-04-2016 IPR008949 Isoprenoid synthase domain APA12_RS00995 3618f2fcb17da83c631ea1d286725a57 286 PANTHER PTHR31480:SF8 11 271 3.6E-53 T 19-04-2016 APA12_RS00995 3618f2fcb17da83c631ea1d286725a57 286 TIGRFAM TIGR03464 HpnC: squalene synthase HpnC 17 282 2.0E-79 T 19-04-2016 IPR017827 Squalene synthase HpnC APA12_RS04455 ccc080f90df0da5379bd9889086a7a8d 496 SUPERFAMILY SSF53067 8 130 4.01E-30 T 19-04-2016 APA12_RS04455 ccc080f90df0da5379bd9889086a7a8d 496 Pfam PF02541 Ppx/GppA phosphatase family 24 295 5.1E-35 T 19-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 APA12_RS04455 ccc080f90df0da5379bd9889086a7a8d 496 SUPERFAMILY SSF53067 133 297 1.17E-29 T 19-04-2016 APA12_RS04455 ccc080f90df0da5379bd9889086a7a8d 496 PANTHER PTHR30005 8 461 8.8E-61 T 19-04-2016 APA12_RS04455 ccc080f90df0da5379bd9889086a7a8d 496 SUPERFAMILY SSF109604 339 463 1.38E-9 T 19-04-2016 APA12_RS04455 ccc080f90df0da5379bd9889086a7a8d 496 Gene3D G3DSA:3.30.420.150 133 297 2.8E-25 T 19-04-2016 APA12_RS04455 ccc080f90df0da5379bd9889086a7a8d 496 Gene3D G3DSA:3.30.420.40 5 127 7.8E-34 T 19-04-2016 APA12_RS01470 25331be40225705788f3b5c3ec7a1aa2 259 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 1 255 31.032 T 19-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APA12_RS01470 25331be40225705788f3b5c3ec7a1aa2 259 PIRSF PIRSF000161 1 257 1.1E-81 T 19-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APA12_RS01470 25331be40225705788f3b5c3ec7a1aa2 259 SUPERFAMILY SSF55347 117 226 2.4E-33 T 19-04-2016 APA12_RS01470 25331be40225705788f3b5c3ec7a1aa2 259 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 117 254 4.9E-44 T 19-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APA12_RS01470 25331be40225705788f3b5c3ec7a1aa2 259 Gene3D G3DSA:3.40.50.720 1 122 4.0E-16 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS01470 25331be40225705788f3b5c3ec7a1aa2 259 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 255 3.3E-68 T 19-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APA12_RS01470 25331be40225705788f3b5c3ec7a1aa2 259 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 140 157 - T 19-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APA12_RS01470 25331be40225705788f3b5c3ec7a1aa2 259 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 1 114 8.8E-26 T 19-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APA12_RS01470 25331be40225705788f3b5c3ec7a1aa2 259 SUPERFAMILY SSF51735 226 256 5.38E-37 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS01470 25331be40225705788f3b5c3ec7a1aa2 259 SUPERFAMILY SSF51735 1 115 5.38E-37 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS01470 25331be40225705788f3b5c3ec7a1aa2 259 Gene3D G3DSA:3.30.360.10 123 224 5.0E-37 T 19-04-2016 APA12_RS01470 25331be40225705788f3b5c3ec7a1aa2 259 PANTHER PTHR20836 1 256 2.1E-72 T 19-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APA12_RS11020 07c9d29aa30a5e8a66ec15f9d0127831 217 Gene3D G3DSA:1.10.357.10 74 210 1.7E-43 T 19-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APA12_RS11020 07c9d29aa30a5e8a66ec15f9d0127831 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 68 6.1E-12 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APA12_RS11020 07c9d29aa30a5e8a66ec15f9d0127831 217 Gene3D G3DSA:1.10.10.60 13 73 6.6E-18 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS11020 07c9d29aa30a5e8a66ec15f9d0127831 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 5.7E-6 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APA12_RS11020 07c9d29aa30a5e8a66ec15f9d0127831 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 5.7E-6 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APA12_RS11020 07c9d29aa30a5e8a66ec15f9d0127831 217 PANTHER PTHR30055 6 206 4.9E-40 T 19-04-2016 APA12_RS11020 07c9d29aa30a5e8a66ec15f9d0127831 217 Pfam PF08362 YcdC-like protein, C-terminal region 70 210 3.0E-39 T 19-04-2016 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 APA12_RS11020 07c9d29aa30a5e8a66ec15f9d0127831 217 SUPERFAMILY SSF46689 14 92 1.69E-16 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS11020 07c9d29aa30a5e8a66ec15f9d0127831 217 PANTHER PTHR30055:SF42 6 206 4.9E-40 T 19-04-2016 APA12_RS11020 07c9d29aa30a5e8a66ec15f9d0127831 217 SUPERFAMILY SSF48498 89 210 1.2E-32 T 19-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APA12_RS05710 3ddd6544d02d58a5452b580fca59d979 416 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 2 412 30.683 T 19-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 APA12_RS05710 3ddd6544d02d58a5452b580fca59d979 416 PIRSF PIRSF001549 1 413 1.6E-113 T 19-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 APA12_RS05710 3ddd6544d02d58a5452b580fca59d979 416 Pfam PF03129 Anticodon binding domain 325 410 5.1E-10 T 19-04-2016 IPR004154 Anticodon-binding APA12_RS05710 3ddd6544d02d58a5452b580fca59d979 416 SUPERFAMILY SSF55681 4 318 1.75E-95 T 19-04-2016 APA12_RS05710 3ddd6544d02d58a5452b580fca59d979 416 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 5 402 2.5E-142 T 19-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 APA12_RS05710 3ddd6544d02d58a5452b580fca59d979 416 SUPERFAMILY SSF52954 321 412 1.8E-17 T 19-04-2016 IPR004154 Anticodon-binding APA12_RS05710 3ddd6544d02d58a5452b580fca59d979 416 PANTHER PTHR11476 3 415 1.1E-183 T 19-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 APA12_RS05710 3ddd6544d02d58a5452b580fca59d979 416 Gene3D G3DSA:3.30.930.10 4 184 8.0E-85 T 19-04-2016 APA12_RS05710 3ddd6544d02d58a5452b580fca59d979 416 Gene3D G3DSA:3.30.930.10 220 318 8.0E-85 T 19-04-2016 APA12_RS05710 3ddd6544d02d58a5452b580fca59d979 416 PANTHER PTHR11476:SF9 3 415 1.1E-183 T 19-04-2016 APA12_RS05710 3ddd6544d02d58a5452b580fca59d979 416 Gene3D G3DSA:3.40.50.800 321 408 6.2E-20 T 19-04-2016 IPR004154 Anticodon-binding APA12_RS05710 3ddd6544d02d58a5452b580fca59d979 416 Pfam PF13393 Histidyl-tRNA synthetase 9 311 4.1E-42 T 19-04-2016 APA12_RS04595 f4df85b773b5f459654474df3e6c621d 1079 Pfam PF13502 AsmA-like C-terminal region 890 1060 2.5E-8 T 19-04-2016 IPR032712 AsmA-like, C-terminal APA12_RS09020 d6c4bb41f755e44ad283c2fd4893e23f 188 SMART SM01185 68 122 5.5E-21 T 19-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 APA12_RS09020 d6c4bb41f755e44ad283c2fd4893e23f 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 69 122 3.3E-18 T 19-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 APA12_RS09020 d6c4bb41f755e44ad283c2fd4893e23f 188 TIGRFAM TIGR00038 efp: translation elongation factor P 4 186 2.7E-68 T 19-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 APA12_RS09020 d6c4bb41f755e44ad283c2fd4893e23f 188 SMART SM00841 130 185 3.7E-30 T 19-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 APA12_RS09020 d6c4bb41f755e44ad283c2fd4893e23f 188 Gene3D G3DSA:2.40.50.140 67 127 5.7E-20 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS09020 d6c4bb41f755e44ad283c2fd4893e23f 188 SUPERFAMILY SSF50249 67 127 2.06E-15 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS09020 d6c4bb41f755e44ad283c2fd4893e23f 188 PANTHER PTHR30053:SF1 1 187 1.1E-84 T 19-04-2016 APA12_RS09020 d6c4bb41f755e44ad283c2fd4893e23f 188 SUPERFAMILY SSF50249 130 186 2.06E-17 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS09020 d6c4bb41f755e44ad283c2fd4893e23f 188 PANTHER PTHR30053 1 187 1.1E-84 T 19-04-2016 APA12_RS09020 d6c4bb41f755e44ad283c2fd4893e23f 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 61 1.8E-20 T 19-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 APA12_RS09020 d6c4bb41f755e44ad283c2fd4893e23f 188 ProSitePatterns PS01275 Elongation factor P signature. 151 170 - T 19-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 APA12_RS09020 d6c4bb41f755e44ad283c2fd4893e23f 188 Hamap MF_00141 Elongation factor P [efp]. 2 186 41.934 T 19-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 APA12_RS09020 d6c4bb41f755e44ad283c2fd4893e23f 188 Gene3D G3DSA:2.40.50.140 130 186 6.0E-25 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS09020 d6c4bb41f755e44ad283c2fd4893e23f 188 PIRSF PIRSF005901 1 187 4.2E-66 T 19-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 APA12_RS09020 d6c4bb41f755e44ad283c2fd4893e23f 188 SUPERFAMILY SSF50104 4 63 6.62E-16 T 19-04-2016 IPR008991 Translation protein SH3-like domain APA12_RS09020 d6c4bb41f755e44ad283c2fd4893e23f 188 Pfam PF09285 Elongation factor P, C-terminal 130 185 3.1E-24 T 19-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 APA12_RS09020 d6c4bb41f755e44ad283c2fd4893e23f 188 Gene3D G3DSA:2.30.30.30 4 63 4.6E-22 T 19-04-2016 IPR014722 Ribosomal protein L2 domain 2 APA12_RS05280 f9f01429ec972cb9cdeeae42c36ebd30 274 Gene3D G3DSA:1.10.150.20 85 120 8.8E-5 T 19-04-2016 APA12_RS05280 f9f01429ec972cb9cdeeae42c36ebd30 274 SUPERFAMILY SSF47781 53 122 4.45E-8 T 19-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APA12_RS05280 f9f01429ec972cb9cdeeae42c36ebd30 274 PANTHER PTHR30471:SF3 38 180 4.3E-24 T 19-04-2016 APA12_RS05280 f9f01429ec972cb9cdeeae42c36ebd30 274 Pfam PF04002 RadC-like JAB domain 142 268 3.5E-16 T 19-04-2016 IPR025657 RadC-like JAB domain APA12_RS05280 f9f01429ec972cb9cdeeae42c36ebd30 274 Gene3D G3DSA:3.40.140.10 138 269 1.7E-24 T 19-04-2016 APA12_RS05280 f9f01429ec972cb9cdeeae42c36ebd30 274 PANTHER PTHR30471 38 180 4.3E-24 T 19-04-2016 APA12_RS06780 0ac2004afef8dd52d6c99ca53d594f7c 768 Gene3D G3DSA:2.170.16.10 423 568 5.6E-9 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS06780 0ac2004afef8dd52d6c99ca53d594f7c 768 Pfam PF13403 Hint domain 423 564 1.1E-46 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS06780 0ac2004afef8dd52d6c99ca53d594f7c 768 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 229 265 1.6E-5 T 19-04-2016 IPR030930 Adhesin of bacterial autotransporter system APA12_RS06780 0ac2004afef8dd52d6c99ca53d594f7c 768 Pfam PF16168 Adhesin of bacterial autotransporter system, probable stalk 226 276 1.0E-6 T 19-04-2016 IPR030930 Adhesin of bacterial autotransporter system APA12_RS06780 0ac2004afef8dd52d6c99ca53d594f7c 768 SUPERFAMILY SSF51294 424 561 1.57E-13 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS07170 9e14ae19e7e7a47590e77c36299eefa5 206 Pfam PF00881 Nitroreductase family 78 163 2.6E-6 T 19-04-2016 IPR029479 Nitroreductase APA12_RS07170 9e14ae19e7e7a47590e77c36299eefa5 206 Pfam PF00881 Nitroreductase family 17 60 5.1E-13 T 19-04-2016 IPR029479 Nitroreductase APA12_RS07170 9e14ae19e7e7a47590e77c36299eefa5 206 PANTHER PTHR23026 4 164 4.8E-19 T 19-04-2016 APA12_RS07170 9e14ae19e7e7a47590e77c36299eefa5 206 SUPERFAMILY SSF55469 8 198 3.53E-44 T 19-04-2016 IPR000415 Nitroreductase-like GO:0016491 APA12_RS07170 9e14ae19e7e7a47590e77c36299eefa5 206 Gene3D G3DSA:3.40.109.10 6 198 4.9E-42 T 19-04-2016 IPR000415 Nitroreductase-like GO:0016491 APA12_RS07945 3bceed50fa5eb4f7ee85595474fac978 523 PANTHER PTHR18968 11 511 1.7E-176 T 19-04-2016 APA12_RS07945 3bceed50fa5eb4f7ee85595474fac978 523 Gene3D G3DSA:3.40.50.1220 198 363 6.4E-41 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APA12_RS07945 3bceed50fa5eb4f7ee85595474fac978 523 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 13 180 4.3E-43 T 19-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 APA12_RS07945 3bceed50fa5eb4f7ee85595474fac978 523 SUPERFAMILY SSF52518 372 485 4.83E-28 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS07945 3bceed50fa5eb4f7ee85595474fac978 523 Gene3D G3DSA:3.40.50.970 371 509 4.9E-34 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS07945 3bceed50fa5eb4f7ee85595474fac978 523 SUPERFAMILY SSF52518 12 181 3.85E-42 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS07945 3bceed50fa5eb4f7ee85595474fac978 523 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 204 333 4.2E-33 T 19-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 APA12_RS07945 3bceed50fa5eb4f7ee85595474fac978 523 SUPERFAMILY SSF52467 198 360 4.5E-39 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APA12_RS07945 3bceed50fa5eb4f7ee85595474fac978 523 PANTHER PTHR18968:SF6 11 511 1.7E-176 T 19-04-2016 APA12_RS07945 3bceed50fa5eb4f7ee85595474fac978 523 Gene3D G3DSA:3.40.50.970 12 181 3.3E-47 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS07945 3bceed50fa5eb4f7ee85595474fac978 523 TIGRFAM TIGR03254 oxalate_oxc: oxalyl-CoA decarboxylase 10 511 4.7E-253 T 19-04-2016 IPR017660 Oxalyl-CoA decarboxylase GO:0008949|GO:0030976|GO:0033611|GO:0046872 KEGG: 00630+4.1.1.8|MetaCyc: PWY-6695|MetaCyc: PWY-6696|UniPathway: UPA00540 APA12_RS07945 3bceed50fa5eb4f7ee85595474fac978 523 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 401 482 3.6E-19 T 19-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 APA12_RS05080 a3be9eb26b613dc2d23eca27afa4b4b6 271 PANTHER PTHR13696:SF1 1 257 2.4E-84 T 19-04-2016 APA12_RS05080 a3be9eb26b613dc2d23eca27afa4b4b6 271 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 266 3.7E-106 T 19-04-2016 IPR010223 ATP binding protein MinD, bacterial-type GO:0000918|GO:0016887 APA12_RS05080 a3be9eb26b613dc2d23eca27afa4b4b6 271 Gene3D G3DSA:3.40.50.300 1 247 2.0E-61 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05080 a3be9eb26b613dc2d23eca27afa4b4b6 271 SUPERFAMILY SSF52540 1 252 1.14E-56 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05080 a3be9eb26b613dc2d23eca27afa4b4b6 271 PIRSF PIRSF003092 1 270 2.0E-87 T 19-04-2016 IPR025501 ATP binding protein MinD APA12_RS05080 a3be9eb26b613dc2d23eca27afa4b4b6 271 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 215 4.1E-30 T 19-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain APA12_RS05080 a3be9eb26b613dc2d23eca27afa4b4b6 271 PANTHER PTHR13696 1 257 2.4E-84 T 19-04-2016 APA12_RS10800 2f641fcf847645ec36202d8033de2f41 246 PANTHER PTHR40279:SF2 1 246 2.8E-134 T 19-04-2016 APA12_RS10800 2f641fcf847645ec36202d8033de2f41 246 TIGRFAM TIGR02111 PQQ_syn_pqqC: coenzyme PQQ biosynthesis protein C 6 243 8.7E-115 T 19-04-2016 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420|UniPathway: UPA00539 APA12_RS10800 2f641fcf847645ec36202d8033de2f41 246 Gene3D G3DSA:1.20.910.10 2 243 8.8E-102 T 19-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 APA12_RS10800 2f641fcf847645ec36202d8033de2f41 246 Hamap MF_00654 Pyrroloquinoline-quinone synthase [pqqC]. 1 246 123.909 T 19-04-2016 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420|UniPathway: UPA00539 APA12_RS10800 2f641fcf847645ec36202d8033de2f41 246 SUPERFAMILY SSF48613 2 244 1.51E-62 T 19-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 APA12_RS10800 2f641fcf847645ec36202d8033de2f41 246 Pfam PF03070 TENA/THI-4/PQQC family 13 223 2.0E-57 T 19-04-2016 IPR004305 Thiaminase-2/PQQC APA12_RS10800 2f641fcf847645ec36202d8033de2f41 246 PANTHER PTHR40279 1 246 2.8E-134 T 19-04-2016 APA12_RS12010 0d113c0b0d3584985cd70f81f40aed4f 507 Gene3D G3DSA:1.20.1600.10 51 495 2.0E-110 T 19-04-2016 APA12_RS12010 0d113c0b0d3584985cd70f81f40aed4f 507 PANTHER PTHR30203 144 494 7.9E-133 T 19-04-2016 APA12_RS12010 0d113c0b0d3584985cd70f81f40aed4f 507 PANTHER PTHR30203 9 117 7.9E-133 T 19-04-2016 APA12_RS12010 0d113c0b0d3584985cd70f81f40aed4f 507 SUPERFAMILY SSF56954 143 496 2.35E-103 T 19-04-2016 APA12_RS12010 0d113c0b0d3584985cd70f81f40aed4f 507 SUPERFAMILY SSF56954 1 114 2.35E-103 T 19-04-2016 APA12_RS12010 0d113c0b0d3584985cd70f81f40aed4f 507 Pfam PF02321 Outer membrane efflux protein 309 490 3.6E-20 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APA12_RS12010 0d113c0b0d3584985cd70f81f40aed4f 507 Pfam PF02321 Outer membrane efflux protein 66 279 6.0E-22 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APA12_RS12010 0d113c0b0d3584985cd70f81f40aed4f 507 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 10 492 7.0E-98 T 19-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 APA12_RS12010 0d113c0b0d3584985cd70f81f40aed4f 507 PANTHER PTHR30203:SF3 144 494 7.9E-133 T 19-04-2016 APA12_RS12010 0d113c0b0d3584985cd70f81f40aed4f 507 PANTHER PTHR30203:SF3 9 117 7.9E-133 T 19-04-2016 APA12_RS06315 37f2a0934bb8d96c01e6b7510d93e6cc 329 Gene3D G3DSA:3.30.1330.10 14 148 1.7E-35 T 19-04-2016 IPR016188 PurM-like, N-terminal domain APA12_RS06315 37f2a0934bb8d96c01e6b7510d93e6cc 329 PANTHER PTHR30270:SF0 1 328 1.2E-83 T 19-04-2016 APA12_RS06315 37f2a0934bb8d96c01e6b7510d93e6cc 329 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 15 329 5.0E-84 T 19-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 APA12_RS06315 37f2a0934bb8d96c01e6b7510d93e6cc 329 PANTHER PTHR30270 1 328 1.2E-83 T 19-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 APA12_RS06315 37f2a0934bb8d96c01e6b7510d93e6cc 329 Pfam PF02769 AIR synthase related protein, C-terminal domain 160 304 1.5E-8 T 19-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APA12_RS06315 37f2a0934bb8d96c01e6b7510d93e6cc 329 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 13 326 27.637 T 19-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 APA12_RS06315 37f2a0934bb8d96c01e6b7510d93e6cc 329 SUPERFAMILY SSF55326 19 147 3.31E-29 T 19-04-2016 APA12_RS06315 37f2a0934bb8d96c01e6b7510d93e6cc 329 SUPERFAMILY SSF56042 153 313 9.24E-33 T 19-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APA12_RS06315 37f2a0934bb8d96c01e6b7510d93e6cc 329 Gene3D G3DSA:3.90.650.10 155 328 3.9E-38 T 19-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APA12_RS06315 37f2a0934bb8d96c01e6b7510d93e6cc 329 PIRSF PIRSF005303 7 329 1.4E-77 T 19-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 APA12_RS06315 37f2a0934bb8d96c01e6b7510d93e6cc 329 Pfam PF00586 AIR synthase related protein, N-terminal domain 36 148 4.3E-18 T 19-04-2016 IPR016188 PurM-like, N-terminal domain APA12_RS12555 2c163ee790c5279778d7016f0aba4c03 162 Gene3D G3DSA:3.30.230.10 37 162 3.9E-53 T 19-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APA12_RS12555 2c163ee790c5279778d7016f0aba4c03 162 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 33 162 32.697 T 19-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid APA12_RS12555 2c163ee790c5279778d7016f0aba4c03 162 SUPERFAMILY SSF54211 37 162 1.4E-48 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APA12_RS12555 2c163ee790c5279778d7016f0aba4c03 162 PANTHER PTHR21569 32 162 2.2E-67 T 19-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 APA12_RS12555 2c163ee790c5279778d7016f0aba4c03 162 ProSitePatterns PS00360 Ribosomal protein S9 signature. 101 119 - T 19-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 APA12_RS12555 2c163ee790c5279778d7016f0aba4c03 162 Pfam PF00380 Ribosomal protein S9/S16 42 162 7.1E-49 T 19-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 APA12_RS12555 2c163ee790c5279778d7016f0aba4c03 162 PANTHER PTHR21569:SF1 32 162 2.2E-67 T 19-04-2016 APA12_RS06860 1419cab502fa57d3e4e8dde0af5b4a62 429 Gene3D G3DSA:2.40.170.20 297 426 2.1E-30 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS06860 1419cab502fa57d3e4e8dde0af5b4a62 429 Pfam PF07715 TonB-dependent Receptor Plug Domain 181 282 1.7E-13 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS06860 1419cab502fa57d3e4e8dde0af5b4a62 429 PANTHER PTHR32552 1 64 1.8E-52 T 19-04-2016 APA12_RS06860 1419cab502fa57d3e4e8dde0af5b4a62 429 PANTHER PTHR32552 172 426 1.8E-52 T 19-04-2016 APA12_RS06860 1419cab502fa57d3e4e8dde0af5b4a62 429 SUPERFAMILY SSF56935 172 426 1.14E-44 T 19-04-2016 APA12_RS06860 1419cab502fa57d3e4e8dde0af5b4a62 429 SMART SM00965 87 138 9.5E-12 T 19-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 APA12_RS06860 1419cab502fa57d3e4e8dde0af5b4a62 429 Pfam PF07660 Secretin and TonB N terminus short domain 93 136 1.0E-10 T 19-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 APA12_RS06860 1419cab502fa57d3e4e8dde0af5b4a62 429 Gene3D G3DSA:2.170.130.10 163 290 1.7E-29 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS06860 1419cab502fa57d3e4e8dde0af5b4a62 429 PANTHER PTHR32552:SF17 1 64 1.8E-52 T 19-04-2016 APA12_RS06860 1419cab502fa57d3e4e8dde0af5b4a62 429 PANTHER PTHR32552:SF17 172 426 1.8E-52 T 19-04-2016 APA12_RS06170 44032b6672d0c5676733fcc9ce79269b 198 Pfam PF00117 Glutamine amidotransferase class-I 3 185 1.5E-54 T 19-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 APA12_RS06170 44032b6672d0c5676733fcc9ce79269b 198 PRINTS PR00097 Anthranilate synthase component II signature 164 177 5.7E-35 T 19-04-2016 APA12_RS06170 44032b6672d0c5676733fcc9ce79269b 198 PRINTS PR00097 Anthranilate synthase component II signature 74 85 5.7E-35 T 19-04-2016 APA12_RS06170 44032b6672d0c5676733fcc9ce79269b 198 PRINTS PR00097 Anthranilate synthase component II signature 99 107 5.7E-35 T 19-04-2016 APA12_RS06170 44032b6672d0c5676733fcc9ce79269b 198 PRINTS PR00097 Anthranilate synthase component II signature 47 56 5.7E-35 T 19-04-2016 APA12_RS06170 44032b6672d0c5676733fcc9ce79269b 198 PRINTS PR00097 Anthranilate synthase component II signature 119 131 5.7E-35 T 19-04-2016 APA12_RS06170 44032b6672d0c5676733fcc9ce79269b 198 PRINTS PR00097 Anthranilate synthase component II signature 2 16 5.7E-35 T 19-04-2016 APA12_RS06170 44032b6672d0c5676733fcc9ce79269b 198 Gene3D G3DSA:3.40.50.880 1 188 1.5E-69 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like APA12_RS06170 44032b6672d0c5676733fcc9ce79269b 198 PANTHER PTHR11922 1 193 4.3E-91 T 19-04-2016 APA12_RS06170 44032b6672d0c5676733fcc9ce79269b 198 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 1.1E-13 T 19-04-2016 APA12_RS06170 44032b6672d0c5676733fcc9ce79269b 198 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 1.1E-13 T 19-04-2016 APA12_RS06170 44032b6672d0c5676733fcc9ce79269b 198 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 1.1E-13 T 19-04-2016 APA12_RS06170 44032b6672d0c5676733fcc9ce79269b 198 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 186 5.6E-77 T 19-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APA12_RS06170 44032b6672d0c5676733fcc9ce79269b 198 SUPERFAMILY SSF52317 1 193 3.3E-59 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like APA12_RS06170 44032b6672d0c5676733fcc9ce79269b 198 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 1.2E-6 T 19-04-2016 APA12_RS06170 44032b6672d0c5676733fcc9ce79269b 198 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 1.2E-6 T 19-04-2016 APA12_RS06170 44032b6672d0c5676733fcc9ce79269b 198 PANTHER PTHR11922:SF7 1 193 4.3E-91 T 19-04-2016 APA12_RS00755 0328b58852439d6653220f7a4ce5f57a 784 Gene3D G3DSA:2.40.170.20 212 784 2.2E-89 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS00755 0328b58852439d6653220f7a4ce5f57a 784 PANTHER PTHR32552 100 784 3.2E-39 T 19-04-2016 APA12_RS00755 0328b58852439d6653220f7a4ce5f57a 784 Pfam PF00593 TonB dependent receptor 520 781 4.7E-23 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS00755 0328b58852439d6653220f7a4ce5f57a 784 Pfam PF07715 TonB-dependent Receptor Plug Domain 99 197 1.4E-8 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS00755 0328b58852439d6653220f7a4ce5f57a 784 PANTHER PTHR32552:SF17 100 784 3.2E-39 T 19-04-2016 APA12_RS00755 0328b58852439d6653220f7a4ce5f57a 784 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 100 784 1.6E-70 T 19-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 APA12_RS00755 0328b58852439d6653220f7a4ce5f57a 784 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 767 784 - T 19-04-2016 IPR010917 TonB-dependent receptor, conserved site APA12_RS00755 0328b58852439d6653220f7a4ce5f57a 784 SUPERFAMILY SSF56935 81 784 1.98E-89 T 19-04-2016 APA12_RS00755 0328b58852439d6653220f7a4ce5f57a 784 Gene3D G3DSA:2.170.130.10 80 207 1.4E-17 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS03405 f45338884e389ebf0da81e564d95a356 186 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 21 176 1.2E-50 T 19-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APA12_RS03405 f45338884e389ebf0da81e564d95a356 186 Hamap MF_00163 Peptide deformylase [def]. 19 182 29.741 T 19-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APA12_RS03405 f45338884e389ebf0da81e564d95a356 186 Gene3D G3DSA:3.90.45.10 22 183 1.4E-58 T 19-04-2016 IPR023635 Peptide deformylase APA12_RS03405 f45338884e389ebf0da81e564d95a356 186 SUPERFAMILY SSF56420 20 182 4.19E-55 T 19-04-2016 IPR023635 Peptide deformylase APA12_RS03405 f45338884e389ebf0da81e564d95a356 186 PANTHER PTHR10458:SF10 21 181 7.7E-60 T 19-04-2016 APA12_RS03405 f45338884e389ebf0da81e564d95a356 186 PRINTS PR01576 Peptide deformylase signature 140 169 3.6E-36 T 19-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APA12_RS03405 f45338884e389ebf0da81e564d95a356 186 PRINTS PR01576 Peptide deformylase signature 109 120 3.6E-36 T 19-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APA12_RS03405 f45338884e389ebf0da81e564d95a356 186 PRINTS PR01576 Peptide deformylase signature 121 139 3.6E-36 T 19-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APA12_RS03405 f45338884e389ebf0da81e564d95a356 186 PRINTS PR01576 Peptide deformylase signature 51 80 3.6E-36 T 19-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APA12_RS03405 f45338884e389ebf0da81e564d95a356 186 PIRSF PIRSF004749 4 186 7.6E-54 T 19-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APA12_RS03405 f45338884e389ebf0da81e564d95a356 186 Pfam PF01327 Polypeptide deformylase 22 171 2.1E-49 T 19-04-2016 IPR023635 Peptide deformylase APA12_RS03405 f45338884e389ebf0da81e564d95a356 186 PANTHER PTHR10458 21 181 7.7E-60 T 19-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APA12_RS05715 0b2a90e09724e91692fe3094f3bb74bc 352 Pfam PF03462 PCRF domain 15 198 9.8E-64 T 19-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 APA12_RS05715 0b2a90e09724e91692fe3094f3bb74bc 352 Gene3D G3DSA:3.30.160.20 205 282 5.5E-36 T 19-04-2016 IPR014720 Double-stranded RNA-binding domain APA12_RS05715 0b2a90e09724e91692fe3094f3bb74bc 352 SUPERFAMILY SSF75620 26 346 2.22E-125 T 19-04-2016 APA12_RS05715 0b2a90e09724e91692fe3094f3bb74bc 352 PANTHER PTHR11075 5 350 8.3E-171 T 19-04-2016 APA12_RS05715 0b2a90e09724e91692fe3094f3bb74bc 352 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 222 238 - T 19-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APA12_RS05715 0b2a90e09724e91692fe3094f3bb74bc 352 Pfam PF00472 RF-1 domain 206 315 1.2E-42 T 19-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APA12_RS05715 0b2a90e09724e91692fe3094f3bb74bc 352 PANTHER PTHR11075:SF9 5 350 8.3E-171 T 19-04-2016 APA12_RS05715 0b2a90e09724e91692fe3094f3bb74bc 352 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 5 348 3.6E-148 T 19-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 APA12_RS05715 0b2a90e09724e91692fe3094f3bb74bc 352 SMART SM00937 58 173 4.4E-51 T 19-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 APA12_RS05715 0b2a90e09724e91692fe3094f3bb74bc 352 Gene3D G3DSA:1.20.58.410 7 87 4.4E-8 T 19-04-2016 APA12_RS05715 0b2a90e09724e91692fe3094f3bb74bc 352 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 3 351 38.362 T 19-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 APA12_RS01405 7b98c6171303116ad40ab42d095b07d9 382 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 53 271 9.0E-59 T 19-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 APA12_RS01405 7b98c6171303116ad40ab42d095b07d9 382 Gene3D G3DSA:3.40.710.10 33 288 2.5E-82 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APA12_RS01405 7b98c6171303116ad40ab42d095b07d9 382 SUPERFAMILY SSF56601 33 288 1.23E-70 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APA12_RS01405 7b98c6171303116ad40ab42d095b07d9 382 PANTHER PTHR21581 55 325 1.7E-59 T 19-04-2016 APA12_RS01405 7b98c6171303116ad40ab42d095b07d9 382 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 77 88 7.2E-10 T 19-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APA12_RS01405 7b98c6171303116ad40ab42d095b07d9 382 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 158 171 7.2E-10 T 19-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APA12_RS01405 7b98c6171303116ad40ab42d095b07d9 382 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 130 147 7.2E-10 T 19-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APA12_RS05890 78247fe6364bd5ffd42e06ab12d7660e 675 PANTHER PTHR23417:SF2 450 651 3.1E-65 T 19-04-2016 APA12_RS05890 78247fe6364bd5ffd42e06ab12d7660e 675 PANTHER PTHR23417:SF2 390 400 3.1E-65 T 19-04-2016 APA12_RS05890 78247fe6364bd5ffd42e06ab12d7660e 675 PANTHER PTHR23417 450 651 3.1E-65 T 19-04-2016 APA12_RS05890 78247fe6364bd5ffd42e06ab12d7660e 675 Pfam PF04028 Domain of unknown function (DUF374) 79 150 1.7E-20 T 19-04-2016 IPR007172 Domain of unknown function DUF374 APA12_RS05890 78247fe6364bd5ffd42e06ab12d7660e 675 SUPERFAMILY SSF53756 310 671 2.88E-8 T 19-04-2016 APA12_RS05890 78247fe6364bd5ffd42e06ab12d7660e 675 PANTHER PTHR23417 237 371 3.1E-65 T 19-04-2016 APA12_RS05890 78247fe6364bd5ffd42e06ab12d7660e 675 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 292 468 5.8E-57 T 19-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 APA12_RS05890 78247fe6364bd5ffd42e06ab12d7660e 675 PANTHER PTHR23417:SF2 237 371 3.1E-65 T 19-04-2016 APA12_RS05890 78247fe6364bd5ffd42e06ab12d7660e 675 ProDom PD032436 LIPOPROTEIN UNCHARACTERIZED PROBABLE CJ0457C SIMILAR TRANSFERASE BACTERIA PRECURSOR SIGNAL CC0304 54 149 6.0E-16 T 19-04-2016 IPR007172 Domain of unknown function DUF374 APA12_RS05890 78247fe6364bd5ffd42e06ab12d7660e 675 PANTHER PTHR23417 390 400 3.1E-65 T 19-04-2016 APA12_RS00495 8acc9f790f4972e7dee340fd28902ace 478 PRINTS PR00481 Cytosol aminopeptidase signature 230 247 9.5E-43 T 19-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APA12_RS00495 8acc9f790f4972e7dee340fd28902ace 478 PRINTS PR00481 Cytosol aminopeptidase signature 311 331 9.5E-43 T 19-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APA12_RS00495 8acc9f790f4972e7dee340fd28902ace 478 PRINTS PR00481 Cytosol aminopeptidase signature 252 273 9.5E-43 T 19-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APA12_RS00495 8acc9f790f4972e7dee340fd28902ace 478 PRINTS PR00481 Cytosol aminopeptidase signature 289 310 9.5E-43 T 19-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APA12_RS00495 8acc9f790f4972e7dee340fd28902ace 478 PRINTS PR00481 Cytosol aminopeptidase signature 339 354 9.5E-43 T 19-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APA12_RS00495 8acc9f790f4972e7dee340fd28902ace 478 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 153 456 2.2E-95 T 19-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 APA12_RS00495 8acc9f790f4972e7dee340fd28902ace 478 PANTHER PTHR11963:SF13 137 464 6.9E-135 T 19-04-2016 APA12_RS00495 8acc9f790f4972e7dee340fd28902ace 478 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 315 322 - T 19-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 APA12_RS00495 8acc9f790f4972e7dee340fd28902ace 478 PANTHER PTHR11963 137 464 6.9E-135 T 19-04-2016 APA12_RS00495 8acc9f790f4972e7dee340fd28902ace 478 SUPERFAMILY SSF53187 148 469 5.23E-101 T 19-04-2016 APA12_RS00495 8acc9f790f4972e7dee340fd28902ace 478 Gene3D G3DSA:3.40.630.10 139 470 1.0E-111 T 19-04-2016 APA12_RS08575 3a9775c3dbd7e3e89a6f803be34eeea9 104 SUPERFAMILY SSF47729 1 91 7.65E-27 T 19-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APA12_RS08575 3a9775c3dbd7e3e89a6f803be34eeea9 104 PANTHER PTHR33175 1 91 1.1E-34 T 19-04-2016 APA12_RS08575 3a9775c3dbd7e3e89a6f803be34eeea9 104 Pfam PF00216 Bacterial DNA-binding protein 1 91 1.2E-27 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APA12_RS08575 3a9775c3dbd7e3e89a6f803be34eeea9 104 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 19-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 APA12_RS08575 3a9775c3dbd7e3e89a6f803be34eeea9 104 PANTHER PTHR33175:SF5 1 91 1.1E-34 T 19-04-2016 APA12_RS08575 3a9775c3dbd7e3e89a6f803be34eeea9 104 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.1E-15 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APA12_RS08575 3a9775c3dbd7e3e89a6f803be34eeea9 104 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.1E-15 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APA12_RS08575 3a9775c3dbd7e3e89a6f803be34eeea9 104 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.1E-15 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APA12_RS08575 3a9775c3dbd7e3e89a6f803be34eeea9 104 SMART SM00411 1 91 3.6E-31 T 19-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APA12_RS08575 3a9775c3dbd7e3e89a6f803be34eeea9 104 Gene3D G3DSA:4.10.520.10 1 92 2.7E-29 T 19-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APA12_RS08575 3a9775c3dbd7e3e89a6f803be34eeea9 104 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 92 8.5E-36 T 19-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 APA12_RS13225 26270b7b1ff95f32c6a6d3d96bd23598 1190 SUPERFAMILY SSF52540 130 210 4.26E-99 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS13225 26270b7b1ff95f32c6a6d3d96bd23598 1190 SUPERFAMILY SSF52540 360 830 4.26E-99 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS13225 26270b7b1ff95f32c6a6d3d96bd23598 1190 SUPERFAMILY SSF52540 18 92 4.26E-99 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS13225 26270b7b1ff95f32c6a6d3d96bd23598 1190 SUPERFAMILY SSF52540 870 896 4.26E-99 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS13225 26270b7b1ff95f32c6a6d3d96bd23598 1190 Pfam PF00580 UvrD/REP helicase N-terminal domain 18 483 5.0E-49 T 19-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 APA12_RS13225 26270b7b1ff95f32c6a6d3d96bd23598 1190 TIGRFAM TIGR02784 addA_alphas: double-strand break repair helicase AddA 19 1168 0.0 T 19-04-2016 IPR014151 DNA helicase, AddA type APA12_RS13225 26270b7b1ff95f32c6a6d3d96bd23598 1190 Gene3D G3DSA:3.40.50.300 370 485 2.3E-59 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS13225 26270b7b1ff95f32c6a6d3d96bd23598 1190 Gene3D G3DSA:3.40.50.300 17 88 2.3E-59 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS13225 26270b7b1ff95f32c6a6d3d96bd23598 1190 Gene3D G3DSA:3.40.50.300 138 200 2.3E-59 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS13225 26270b7b1ff95f32c6a6d3d96bd23598 1190 Gene3D G3DSA:1.10.486.10 645 782 6.8E-15 T 19-04-2016 APA12_RS13225 26270b7b1ff95f32c6a6d3d96bd23598 1190 Pfam PF13361 UvrD-like helicase C-terminal domain 623 890 8.6E-10 T 19-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 APA12_RS13225 26270b7b1ff95f32c6a6d3d96bd23598 1190 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1017 1151 2.0E-8 T 19-04-2016 APA12_RS13225 26270b7b1ff95f32c6a6d3d96bd23598 1190 Gene3D G3DSA:3.40.50.300 502 636 3.1E-33 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS13225 26270b7b1ff95f32c6a6d3d96bd23598 1190 Gene3D G3DSA:3.40.50.300 792 895 3.1E-33 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS13225 26270b7b1ff95f32c6a6d3d96bd23598 1190 PANTHER PTHR11070 335 552 4.5E-81 T 19-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APA12_RS13225 26270b7b1ff95f32c6a6d3d96bd23598 1190 PANTHER PTHR11070 130 228 4.5E-81 T 19-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APA12_RS13225 26270b7b1ff95f32c6a6d3d96bd23598 1190 PANTHER PTHR11070 18 101 4.5E-81 T 19-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APA12_RS13225 26270b7b1ff95f32c6a6d3d96bd23598 1190 PANTHER PTHR11070 576 837 4.5E-81 T 19-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APA12_RS13225 26270b7b1ff95f32c6a6d3d96bd23598 1190 PANTHER PTHR11070 869 913 4.5E-81 T 19-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APA12_RS01525 bc21fc5e7dd4847da2721d9f7b4d4f34 164 PANTHER PTHR10245:SF38 1 88 3.5E-33 T 19-04-2016 APA12_RS01525 bc21fc5e7dd4847da2721d9f7b4d4f34 164 Pfam PF01381 Helix-turn-helix 31 84 5.8E-12 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APA12_RS01525 bc21fc5e7dd4847da2721d9f7b4d4f34 164 SMART SM00530 30 85 1.2E-11 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APA12_RS01525 bc21fc5e7dd4847da2721d9f7b4d4f34 164 Gene3D G3DSA:1.10.260.40 23 90 4.4E-17 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APA12_RS01525 bc21fc5e7dd4847da2721d9f7b4d4f34 164 SUPERFAMILY SSF47413 21 90 6.66E-27 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APA12_RS01525 bc21fc5e7dd4847da2721d9f7b4d4f34 164 PANTHER PTHR10245 1 88 3.5E-33 T 19-04-2016 APA12_RS04485 854b7413afdf9b67cc532b8621e4b9be 458 SUPERFAMILY SSF49785 297 430 1.42E-27 T 19-04-2016 IPR008979 Galactose-binding domain-like APA12_RS04485 854b7413afdf9b67cc532b8621e4b9be 458 Pfam PF00754 F5/8 type C domain 313 416 8.3E-15 T 19-04-2016 IPR000421 Coagulation factor 5/8 C-terminal domain APA12_RS04485 854b7413afdf9b67cc532b8621e4b9be 458 Gene3D G3DSA:2.60.120.260 300 432 3.4E-26 T 19-04-2016 IPR008979 Galactose-binding domain-like APA12_RS01110 93279ba4e4667e60491e135b6b865c23 360 PANTHER PTHR30307 5 352 4.1E-138 T 19-04-2016 APA12_RS01110 93279ba4e4667e60491e135b6b865c23 360 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 5 345 2.0E-103 T 19-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 APA12_RS01110 93279ba4e4667e60491e135b6b865c23 360 Gene3D G3DSA:3.40.1780.10 183 345 4.0E-92 T 19-04-2016 APA12_RS01110 93279ba4e4667e60491e135b6b865c23 360 Gene3D G3DSA:3.40.1780.10 5 64 4.0E-92 T 19-04-2016 APA12_RS01110 93279ba4e4667e60491e135b6b865c23 360 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 346 41.366 T 19-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 APA12_RS01110 93279ba4e4667e60491e135b6b865c23 360 PANTHER PTHR30307:SF0 5 352 4.1E-138 T 19-04-2016 APA12_RS01110 93279ba4e4667e60491e135b6b865c23 360 Pfam PF02547 Queuosine biosynthesis protein 7 345 2.2E-120 T 19-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 APA12_RS01110 93279ba4e4667e60491e135b6b865c23 360 SUPERFAMILY SSF111337 5 345 3.4E-118 T 19-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 APA12_RS01110 93279ba4e4667e60491e135b6b865c23 360 Gene3D G3DSA:2.40.10.240 66 141 3.0E-11 T 19-04-2016 APA12_RS01675 2f0997eb7778c9fbb1c308518f8c33f2 325 Gene3D G3DSA:1.10.287.1080 49 118 3.0E-8 T 19-04-2016 APA12_RS01675 2f0997eb7778c9fbb1c308518f8c33f2 325 Gene3D G3DSA:1.10.287.1080 198 281 2.4E-10 T 19-04-2016 APA12_RS01675 2f0997eb7778c9fbb1c308518f8c33f2 325 PANTHER PTHR30522:SF0 45 325 1.9E-102 T 19-04-2016 IPR011551 NTP pyrophosphohydrolase MazG APA12_RS01675 2f0997eb7778c9fbb1c308518f8c33f2 325 SUPERFAMILY SSF101386 48 148 3.27E-23 T 19-04-2016 APA12_RS01675 2f0997eb7778c9fbb1c308518f8c33f2 325 PANTHER PTHR30522 45 325 1.9E-102 T 19-04-2016 APA12_RS01675 2f0997eb7778c9fbb1c308518f8c33f2 325 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 73 146 1.9E-26 T 19-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core APA12_RS01675 2f0997eb7778c9fbb1c308518f8c33f2 325 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 230 289 4.6E-9 T 19-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core APA12_RS01675 2f0997eb7778c9fbb1c308518f8c33f2 325 SUPERFAMILY SSF101386 200 298 1.45E-22 T 19-04-2016 APA12_RS01675 2f0997eb7778c9fbb1c308518f8c33f2 325 TIGRFAM TIGR00444 mazG: MazG family protein 56 319 1.8E-87 T 19-04-2016 IPR011551 NTP pyrophosphohydrolase MazG APA12_RS05725 e6c10fd40e94e84486d1ffa8927c65b2 292 Gene3D G3DSA:1.10.8.10 13 94 2.2E-20 T 19-04-2016 APA12_RS05725 e6c10fd40e94e84486d1ffa8927c65b2 292 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 194 200 - T 19-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APA12_RS05725 e6c10fd40e94e84486d1ffa8927c65b2 292 Gene3D G3DSA:3.40.50.150 96 289 1.2E-55 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS05725 e6c10fd40e94e84486d1ffa8927c65b2 292 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 35 286 2.0E-70 T 19-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 APA12_RS05725 e6c10fd40e94e84486d1ffa8927c65b2 292 PANTHER PTHR18895:SF64 15 291 1.4E-72 T 19-04-2016 APA12_RS05725 e6c10fd40e94e84486d1ffa8927c65b2 292 PANTHER PTHR18895 15 291 1.4E-72 T 19-04-2016 APA12_RS05725 e6c10fd40e94e84486d1ffa8927c65b2 292 Pfam PF13847 Methyltransferase domain 121 211 4.8E-11 T 19-04-2016 IPR025714 Methyltransferase domain APA12_RS05725 e6c10fd40e94e84486d1ffa8927c65b2 292 SUPERFAMILY SSF53335 72 256 2.05E-43 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS05725 e6c10fd40e94e84486d1ffa8927c65b2 292 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 13 288 1.9E-55 T 19-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 APA12_RS03715 278b021ecef802bf006ffce9924f987d 314 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 22 308 3.1E-78 T 19-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 APA12_RS03715 278b021ecef802bf006ffce9924f987d 314 Gene3D G3DSA:2.40.30.30 189 309 2.8E-38 T 19-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 APA12_RS03715 278b021ecef802bf006ffce9924f987d 314 Pfam PF06574 FAD synthetase 14 167 2.4E-42 T 19-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 APA12_RS03715 278b021ecef802bf006ffce9924f987d 314 Gene3D G3DSA:3.40.50.620 8 187 6.0E-51 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS03715 278b021ecef802bf006ffce9924f987d 314 PANTHER PTHR22749 1 310 8.4E-105 T 19-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 APA12_RS03715 278b021ecef802bf006ffce9924f987d 314 SMART SM00904 183 308 2.8E-59 T 19-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 APA12_RS03715 278b021ecef802bf006ffce9924f987d 314 PANTHER PTHR22749:SF0 1 310 8.4E-105 T 19-04-2016 APA12_RS03715 278b021ecef802bf006ffce9924f987d 314 PIRSF PIRSF004491 3 312 1.6E-90 T 19-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 APA12_RS03715 278b021ecef802bf006ffce9924f987d 314 Pfam PF01687 Riboflavin kinase 184 307 6.6E-38 T 19-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 APA12_RS03715 278b021ecef802bf006ffce9924f987d 314 SUPERFAMILY SSF52374 18 177 5.33E-27 T 19-04-2016 APA12_RS03715 278b021ecef802bf006ffce9924f987d 314 SUPERFAMILY SSF82114 174 308 2.62E-42 T 19-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 APA12_RS06940 b77151c669d857f37d4813ad3d8d55c7 289 Gene3D G3DSA:2.40.170.20 224 284 1.5E-6 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS06940 b77151c669d857f37d4813ad3d8d55c7 289 Gene3D G3DSA:2.170.130.10 82 223 1.4E-22 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS06940 b77151c669d857f37d4813ad3d8d55c7 289 Pfam PF07715 TonB-dependent Receptor Plug Domain 107 211 3.2E-15 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS06940 b77151c669d857f37d4813ad3d8d55c7 289 PANTHER PTHR32552 88 282 1.3E-22 T 19-04-2016 APA12_RS06940 b77151c669d857f37d4813ad3d8d55c7 289 SUPERFAMILY SSF56935 87 283 1.33E-36 T 19-04-2016 APA12_RS09685 1a5437f8833009f703ef4603f073776f 577 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 571 1.2E-144 T 19-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 APA12_RS09685 1a5437f8833009f703ef4603f073776f 577 PANTHER PTHR11059 2 217 3.6E-140 T 19-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 APA12_RS09685 1a5437f8833009f703ef4603f073776f 577 PANTHER PTHR11059 233 571 3.6E-140 T 19-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 APA12_RS09685 1a5437f8833009f703ef4603f073776f 577 Gene3D G3DSA:3.40.50.300 1 208 7.2E-58 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS09685 1a5437f8833009f703ef4603f073776f 577 Gene3D G3DSA:3.40.50.300 451 532 5.7E-8 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS09685 1a5437f8833009f703ef4603f073776f 577 Gene3D G3DSA:3.40.50.300 395 396 5.7E-8 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS09685 1a5437f8833009f703ef4603f073776f 577 Pfam PF02463 RecF/RecN/SMC N terminal domain 14 527 1.1E-16 T 19-04-2016 IPR003395 RecF/RecN/SMC, N-terminal APA12_RS09685 1a5437f8833009f703ef4603f073776f 577 SUPERFAMILY SSF52540 2 50 1.13E-29 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS09685 1a5437f8833009f703ef4603f073776f 577 SUPERFAMILY SSF52540 334 526 1.13E-29 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS09685 1a5437f8833009f703ef4603f073776f 577 SUPERFAMILY SSF52540 1 219 7.87E-57 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS09685 1a5437f8833009f703ef4603f073776f 577 PIRSF PIRSF003128 1 577 2.5E-155 T 19-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 APA12_RS08160 bee6e66aa3a3ec614a92b4a99595f94d 268 Gene3D G3DSA:3.90.550.10 30 254 1.1E-18 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS08160 bee6e66aa3a3ec614a92b4a99595f94d 268 Pfam PF12804 MobA-like NTP transferase domain 11 215 6.5E-22 T 19-04-2016 IPR025877 MobA-like NTP transferase APA12_RS08160 bee6e66aa3a3ec614a92b4a99595f94d 268 SUPERFAMILY SSF53448 24 246 4.77E-33 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS05555 be5e38643189d2e8f7a76d0ef3fed74e 65 PANTHER PTHR34472:SF1 1 65 3.4E-13 T 19-04-2016 APA12_RS05555 be5e38643189d2e8f7a76d0ef3fed74e 65 Pfam PF02597 ThiS family 6 65 3.3E-13 T 19-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 APA12_RS05555 be5e38643189d2e8f7a76d0ef3fed74e 65 SUPERFAMILY SSF54285 2 64 1.19E-15 T 19-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp APA12_RS05555 be5e38643189d2e8f7a76d0ef3fed74e 65 Gene3D G3DSA:3.10.20.30 1 65 1.4E-21 T 19-04-2016 IPR012675 Beta-grasp domain APA12_RS05555 be5e38643189d2e8f7a76d0ef3fed74e 65 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 65 5.3E-18 T 19-04-2016 IPR010035 ThiS, thiamine-biosynthesis APA12_RS05555 be5e38643189d2e8f7a76d0ef3fed74e 65 PANTHER PTHR34472 1 65 3.4E-13 T 19-04-2016 APA12_RS10285 50443bff29057dece122ca962191e42f 234 SMART SM01040 13 98 3.9E-41 T 19-04-2016 IPR003497 BRO N-terminal domain APA12_RS10285 50443bff29057dece122ca962191e42f 234 PANTHER PTHR36180:SF2 1 111 4.9E-39 T 19-04-2016 APA12_RS10285 50443bff29057dece122ca962191e42f 234 PANTHER PTHR36180 1 111 4.9E-39 T 19-04-2016 APA12_RS10285 50443bff29057dece122ca962191e42f 234 Pfam PF02498 BRO family, N-terminal domain 14 98 3.2E-27 T 19-04-2016 IPR003497 BRO N-terminal domain APA12_RS00395 2eaf2a44221be1d524a23963bcef4935 359 Pfam PF02628 Cytochrome oxidase assembly protein 22 345 9.8E-98 T 19-04-2016 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 UniPathway: UPA00269 APA12_RS00395 2eaf2a44221be1d524a23963bcef4935 359 Hamap MF_01665 Heme A synthase [ctaA]. 16 355 24.335 T 19-04-2016 IPR023754 Heme A synthase, type 2 GO:0006784|GO:0016020|GO:0016627|GO:0055114 UniPathway: UPA00269 APA12_RS00395 2eaf2a44221be1d524a23963bcef4935 359 PANTHER PTHR23289 13 353 8.7E-106 T 19-04-2016 APA12_RS11360 2987b8039a10ddc1baa97f05bdf2f819 439 Gene3D G3DSA:3.90.10.10 183 196 1.4E-4 T 19-04-2016 APA12_RS11360 2987b8039a10ddc1baa97f05bdf2f819 439 Gene3D G3DSA:3.90.10.10 37 47 1.4E-4 T 19-04-2016 APA12_RS11360 2987b8039a10ddc1baa97f05bdf2f819 439 Gene3D G3DSA:1.10.760.10 197 291 2.6E-12 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS11360 2987b8039a10ddc1baa97f05bdf2f819 439 Gene3D G3DSA:1.10.760.10 48 139 4.5E-15 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS11360 2987b8039a10ddc1baa97f05bdf2f819 439 SUPERFAMILY SSF46626 30 160 9.63E-20 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS11360 2987b8039a10ddc1baa97f05bdf2f819 439 SUPERFAMILY SSF46626 188 294 8.51E-18 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS11360 2987b8039a10ddc1baa97f05bdf2f819 439 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 331 416 2.3E-10 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS11360 2987b8039a10ddc1baa97f05bdf2f819 439 Gene3D G3DSA:1.10.760.10 331 436 3.1E-18 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS11360 2987b8039a10ddc1baa97f05bdf2f819 439 PANTHER PTHR35008 24 434 4.2E-103 T 19-04-2016 APA12_RS11360 2987b8039a10ddc1baa97f05bdf2f819 439 PANTHER PTHR35008:SF5 24 434 4.2E-103 T 19-04-2016 APA12_RS11360 2987b8039a10ddc1baa97f05bdf2f819 439 SUPERFAMILY SSF46626 331 435 4.73E-18 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS11360 2987b8039a10ddc1baa97f05bdf2f819 439 PIRSF PIRSF000018 9 439 5.6E-152 T 19-04-2016 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 APA12_RS01190 f33f284bc20d39f7d304ad6853e0eb6c 985 Pfam PF00535 Glycosyl transferase family 2 355 467 1.6E-12 T 19-04-2016 IPR001173 Glycosyltransferase 2-like APA12_RS01190 f33f284bc20d39f7d304ad6853e0eb6c 985 PANTHER PTHR22916 299 628 1.2E-35 T 19-04-2016 APA12_RS01190 f33f284bc20d39f7d304ad6853e0eb6c 985 SUPERFAMILY SSF53448 350 590 8.34E-40 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS01190 f33f284bc20d39f7d304ad6853e0eb6c 985 Pfam PF13692 Glycosyl transferases group 1 807 950 2.1E-25 T 19-04-2016 APA12_RS01190 f33f284bc20d39f7d304ad6853e0eb6c 985 Gene3D G3DSA:3.90.550.10 352 599 7.2E-47 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS01190 f33f284bc20d39f7d304ad6853e0eb6c 985 SUPERFAMILY SSF53756 615 982 2.2E-25 T 19-04-2016 APA12_RS04480 74a85dde1b67b865e243a1c77543070f 312 SUPERFAMILY SSF48452 32 176 3.56E-5 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS04480 74a85dde1b67b865e243a1c77543070f 312 Gene3D G3DSA:1.25.40.10 47 262 1.4E-4 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS04675 8aec09e5a576322c80598e3a65e33ef7 1390 PANTHER PTHR20856:SF20 1 241 0.0 T 19-04-2016 APA12_RS04675 8aec09e5a576322c80598e3a65e33ef7 1390 PANTHER PTHR20856:SF20 1078 1173 0.0 T 19-04-2016 APA12_RS04675 8aec09e5a576322c80598e3a65e33ef7 1390 PANTHER PTHR20856:SF20 374 759 0.0 T 19-04-2016 APA12_RS04675 8aec09e5a576322c80598e3a65e33ef7 1390 PANTHER PTHR20856:SF20 775 962 0.0 T 19-04-2016 APA12_RS04675 8aec09e5a576322c80598e3a65e33ef7 1390 PANTHER PTHR20856:SF20 1228 1390 0.0 T 19-04-2016 APA12_RS04675 8aec09e5a576322c80598e3a65e33ef7 1390 Pfam PF04560 RNA polymerase Rpb2, domain 7 1312 1386 7.2E-27 T 19-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APA12_RS04675 8aec09e5a576322c80598e3a65e33ef7 1390 Pfam PF00562 RNA polymerase Rpb2, domain 6 751 1310 1.2E-166 T 19-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APA12_RS04675 8aec09e5a576322c80598e3a65e33ef7 1390 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 12 1385 0.0 T 19-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APA12_RS04675 8aec09e5a576322c80598e3a65e33ef7 1390 PANTHER PTHR20856 1 241 0.0 T 19-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APA12_RS04675 8aec09e5a576322c80598e3a65e33ef7 1390 PANTHER PTHR20856 1078 1173 0.0 T 19-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APA12_RS04675 8aec09e5a576322c80598e3a65e33ef7 1390 PANTHER PTHR20856 374 759 0.0 T 19-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APA12_RS04675 8aec09e5a576322c80598e3a65e33ef7 1390 PANTHER PTHR20856 775 962 0.0 T 19-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APA12_RS04675 8aec09e5a576322c80598e3a65e33ef7 1390 PANTHER PTHR20856 1228 1390 0.0 T 19-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APA12_RS04675 8aec09e5a576322c80598e3a65e33ef7 1390 Pfam PF10385 RNA polymerase beta subunit external 1 domain 625 690 4.5E-17 T 19-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APA12_RS04675 8aec09e5a576322c80598e3a65e33ef7 1390 Pfam PF04565 RNA polymerase Rpb2, domain 3 547 615 9.1E-32 T 19-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APA12_RS04675 8aec09e5a576322c80598e3a65e33ef7 1390 Gene3D G3DSA:2.30.150.10 626 690 2.2E-18 T 19-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APA12_RS04675 8aec09e5a576322c80598e3a65e33ef7 1390 Gene3D G3DSA:2.40.50.100 749 824 1.9E-28 T 19-04-2016 APA12_RS04675 8aec09e5a576322c80598e3a65e33ef7 1390 Gene3D G3DSA:2.40.50.150 859 969 3.9E-58 T 19-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APA12_RS04675 8aec09e5a576322c80598e3a65e33ef7 1390 Gene3D G3DSA:2.40.50.150 1090 1104 3.9E-58 T 19-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APA12_RS04675 8aec09e5a576322c80598e3a65e33ef7 1390 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 16 1388 12.297 T 19-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APA12_RS04675 8aec09e5a576322c80598e3a65e33ef7 1390 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1108 1120 - T 19-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APA12_RS04675 8aec09e5a576322c80598e3a65e33ef7 1390 Gene3D G3DSA:3.90.1100.10 23 160 1.0E-147 T 19-04-2016 APA12_RS04675 8aec09e5a576322c80598e3a65e33ef7 1390 Gene3D G3DSA:3.90.1100.10 693 747 1.0E-147 T 19-04-2016 APA12_RS04675 8aec09e5a576322c80598e3a65e33ef7 1390 Gene3D G3DSA:3.90.1100.10 479 625 1.0E-147 T 19-04-2016 APA12_RS04675 8aec09e5a576322c80598e3a65e33ef7 1390 Gene3D G3DSA:3.90.1110.10 380 478 9.7E-67 T 19-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APA12_RS04675 8aec09e5a576322c80598e3a65e33ef7 1390 Gene3D G3DSA:3.90.1110.10 162 264 9.7E-67 T 19-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APA12_RS04675 8aec09e5a576322c80598e3a65e33ef7 1390 Pfam PF04563 RNA polymerase beta subunit 30 531 2.0E-29 T 19-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APA12_RS04675 8aec09e5a576322c80598e3a65e33ef7 1390 SUPERFAMILY SSF64484 1084 1387 0.0 T 19-04-2016 APA12_RS04675 8aec09e5a576322c80598e3a65e33ef7 1390 SUPERFAMILY SSF64484 14 236 0.0 T 19-04-2016 APA12_RS04675 8aec09e5a576322c80598e3a65e33ef7 1390 SUPERFAMILY SSF64484 377 971 0.0 T 19-04-2016 APA12_RS04675 8aec09e5a576322c80598e3a65e33ef7 1390 Pfam PF04561 RNA polymerase Rpb2, domain 2 390 488 3.6E-18 T 19-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APA12_RS04675 8aec09e5a576322c80598e3a65e33ef7 1390 Gene3D G3DSA:2.40.270.10 825 852 1.4E-87 T 19-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APA12_RS04675 8aec09e5a576322c80598e3a65e33ef7 1390 Gene3D G3DSA:2.40.270.10 1105 1288 1.4E-87 T 19-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APA12_RS02465 e4ffe4388371922aeed67b2bb63ce8b1 469 SUPERFAMILY SSF51294 125 261 5.49E-11 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS02465 e4ffe4388371922aeed67b2bb63ce8b1 469 Gene3D G3DSA:2.170.16.10 124 276 5.7E-5 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS02465 e4ffe4388371922aeed67b2bb63ce8b1 469 Pfam PF13403 Hint domain 124 263 1.1E-38 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS06715 a7e7c2cb1c401aa58136e4a490f3793b 251 PANTHER PTHR30348 1 242 1.9E-63 T 19-04-2016 APA12_RS06715 a7e7c2cb1c401aa58136e4a490f3793b 251 Gene3D G3DSA:3.20.20.410 1 242 1.7E-62 T 19-04-2016 IPR002763 Protein of unknown function DUF72 APA12_RS06715 a7e7c2cb1c401aa58136e4a490f3793b 251 SUPERFAMILY SSF117396 1 240 1.44E-66 T 19-04-2016 IPR002763 Protein of unknown function DUF72 APA12_RS06715 a7e7c2cb1c401aa58136e4a490f3793b 251 Pfam PF01904 Protein of unknown function DUF72 24 237 2.3E-49 T 19-04-2016 IPR002763 Protein of unknown function DUF72 APA12_RS09680 d98731145d850cb84a57344584c01a93 345 Gene3D G3DSA:1.25.40.10 200 258 1.9E-4 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS09680 d98731145d850cb84a57344584c01a93 345 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 18 254 3.2E-82 T 19-04-2016 IPR017689 Outer membrane protein assembly factor BamD APA12_RS09680 d98731145d850cb84a57344584c01a93 345 Gene3D G3DSA:1.25.40.10 48 199 4.0E-11 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS09680 d98731145d850cb84a57344584c01a93 345 Pfam PF13525 Outer membrane lipoprotein 48 240 3.5E-55 T 19-04-2016 APA12_RS09680 d98731145d850cb84a57344584c01a93 345 PANTHER PTHR37423 4 259 7.4E-58 T 19-04-2016 APA12_RS09680 d98731145d850cb84a57344584c01a93 345 SUPERFAMILY SSF48452 197 239 1.54E-12 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS09680 d98731145d850cb84a57344584c01a93 345 SUPERFAMILY SSF48452 48 166 1.54E-12 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS09680 d98731145d850cb84a57344584c01a93 345 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 15 249 39.035 T 19-04-2016 IPR017689 Outer membrane protein assembly factor BamD APA12_RS05640 3a645b7d7af1154f9f2738405f8d5376 296 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 7 270 7.7E-103 T 19-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 APA12_RS05640 3a645b7d7af1154f9f2738405f8d5376 296 PANTHER PTHR22572:SF14 9 283 1.4E-97 T 19-04-2016 APA12_RS05640 3a645b7d7af1154f9f2738405f8d5376 296 Gene3D G3DSA:3.90.550.10 9 280 1.6E-65 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS05640 3a645b7d7af1154f9f2738405f8d5376 296 PANTHER PTHR22572 9 283 1.4E-97 T 19-04-2016 APA12_RS05640 3a645b7d7af1154f9f2738405f8d5376 296 SUPERFAMILY SSF53448 8 281 1.33E-61 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS05640 3a645b7d7af1154f9f2738405f8d5376 296 Pfam PF00483 Nucleotidyl transferase 10 246 2.8E-24 T 19-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 APA12_RS10605 647c23391e237255d840eb8b802a29b9 595 Gene3D G3DSA:3.40.50.970 1 173 1.1E-50 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS10605 647c23391e237255d840eb8b802a29b9 595 Gene3D G3DSA:3.40.50.1220 193 345 2.6E-38 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APA12_RS10605 647c23391e237255d840eb8b802a29b9 595 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 388 542 2.1E-23 T 19-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 APA12_RS10605 647c23391e237255d840eb8b802a29b9 595 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 172 6.2E-40 T 19-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 APA12_RS10605 647c23391e237255d840eb8b802a29b9 595 SUPERFAMILY SSF52518 1 175 2.28E-42 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS10605 647c23391e237255d840eb8b802a29b9 595 SUPERFAMILY SSF52518 358 565 1.16E-48 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS10605 647c23391e237255d840eb8b802a29b9 595 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 199 328 6.7E-24 T 19-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 APA12_RS10605 647c23391e237255d840eb8b802a29b9 595 PANTHER PTHR18968 1 590 2.7E-221 T 19-04-2016 APA12_RS10605 647c23391e237255d840eb8b802a29b9 595 Gene3D G3DSA:3.40.50.970 346 553 1.1E-49 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS10605 647c23391e237255d840eb8b802a29b9 595 SUPERFAMILY SSF52467 192 358 1.17E-39 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APA12_RS10605 647c23391e237255d840eb8b802a29b9 595 PANTHER PTHR18968:SF124 1 590 2.7E-221 T 19-04-2016 APA12_RS12660 a4b096f58ef621cf28343b1db98e8666 130 SUPERFAMILY SSF54593 4 130 2.68E-22 T 19-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APA12_RS12660 a4b096f58ef621cf28343b1db98e8666 130 Gene3D G3DSA:3.10.180.10 9 128 4.4E-27 T 19-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APA12_RS12660 a4b096f58ef621cf28343b1db98e8666 130 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 125 2.0E-7 T 19-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APA12_RS12660 a4b096f58ef621cf28343b1db98e8666 130 PANTHER PTHR21366 1 128 1.3E-36 T 19-04-2016 APA12_RS12660 a4b096f58ef621cf28343b1db98e8666 130 PANTHER PTHR21366:SF15 1 128 1.3E-36 T 19-04-2016 APA12_RS03825 1bd69c9e463c6283a1bb88efe32374e4 213 PANTHER PTHR30309:SF0 7 212 1.4E-62 T 19-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 APA12_RS03825 1bd69c9e463c6283a1bb88efe32374e4 213 SMART SM01207 17 201 7.2E-79 T 19-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 APA12_RS03825 1bd69c9e463c6283a1bb88efe32374e4 213 Pfam PF02660 Glycerol-3-phosphate acyltransferase 18 200 5.1E-49 T 19-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 APA12_RS03825 1bd69c9e463c6283a1bb88efe32374e4 213 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 14 209 19.848 T 19-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 APA12_RS03825 1bd69c9e463c6283a1bb88efe32374e4 213 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 11 210 8.1E-54 T 19-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 APA12_RS03825 1bd69c9e463c6283a1bb88efe32374e4 213 PANTHER PTHR30309 7 212 1.4E-62 T 19-04-2016 APA12_RS12485 2c213646f9d1453b4a92f1c18a971884 257 Gene3D G3DSA:3.90.550.10 19 190 5.2E-21 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS12485 2c213646f9d1453b4a92f1c18a971884 257 PANTHER PTHR10859:SF49 2 244 2.0E-62 T 19-04-2016 APA12_RS12485 2c213646f9d1453b4a92f1c18a971884 257 SUPERFAMILY SSF53448 18 247 1.22E-34 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS12485 2c213646f9d1453b4a92f1c18a971884 257 Pfam PF00535 Glycosyl transferase family 2 20 162 1.4E-22 T 19-04-2016 IPR001173 Glycosyltransferase 2-like APA12_RS12485 2c213646f9d1453b4a92f1c18a971884 257 PANTHER PTHR10859 2 244 2.0E-62 T 19-04-2016 APA12_RS13420 e974dc090968cf90aadf7063e703aa20 677 Gene3D G3DSA:3.60.110.10 11 291 1.5E-52 T 19-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APA12_RS13420 e974dc090968cf90aadf7063e703aa20 677 PIRSF PIRSF006630 8 667 3.3E-157 T 19-04-2016 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|UniPathway: UPA00253 APA12_RS13420 e974dc090968cf90aadf7063e703aa20 677 SUPERFAMILY SSF56317 10 291 6.15E-49 T 19-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APA12_RS13420 e974dc090968cf90aadf7063e703aa20 677 Pfam PF02540 NAD synthase 346 517 1.5E-24 T 19-04-2016 IPR022310 NAD/GMP synthase APA12_RS13420 e974dc090968cf90aadf7063e703aa20 677 PANTHER PTHR23090:SF9 8 593 2.7E-173 T 19-04-2016 APA12_RS13420 e974dc090968cf90aadf7063e703aa20 677 PANTHER PTHR23090:SF9 610 676 2.7E-173 T 19-04-2016 APA12_RS13420 e974dc090968cf90aadf7063e703aa20 677 Gene3D G3DSA:3.40.50.620 616 643 5.0E-59 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS13420 e974dc090968cf90aadf7063e703aa20 677 Gene3D G3DSA:3.40.50.620 324 575 5.0E-59 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS13420 e974dc090968cf90aadf7063e703aa20 677 PANTHER PTHR23090 8 593 2.7E-173 T 19-04-2016 APA12_RS13420 e974dc090968cf90aadf7063e703aa20 677 PANTHER PTHR23090 610 676 2.7E-173 T 19-04-2016 APA12_RS13420 e974dc090968cf90aadf7063e703aa20 677 TIGRFAM TIGR00552 nadE: NAD+ synthetase 349 517 4.1E-20 T 19-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 APA12_RS13420 e974dc090968cf90aadf7063e703aa20 677 Pfam PF00795 Carbon-nitrogen hydrolase 12 281 5.3E-19 T 19-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APA12_RS13420 e974dc090968cf90aadf7063e703aa20 677 SUPERFAMILY SSF52402 323 572 1.12E-62 T 19-04-2016 APA12_RS13420 e974dc090968cf90aadf7063e703aa20 677 SUPERFAMILY SSF52402 613 643 1.12E-62 T 19-04-2016 APA12_RS10900 67cf66f3ef3f8643fc8f2865710de4ed 486 ProSitePatterns PS00217 Sugar transport proteins signature 2. 146 171 - T 19-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APA12_RS10900 67cf66f3ef3f8643fc8f2865710de4ed 486 SUPERFAMILY SSF103473 31 448 2.09E-68 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS10900 67cf66f3ef3f8643fc8f2865710de4ed 486 PANTHER PTHR23508:SF17 9 467 2.7E-262 T 19-04-2016 APA12_RS10900 67cf66f3ef3f8643fc8f2865710de4ed 486 Gene3D G3DSA:1.20.1250.20 262 446 2.3E-21 T 19-04-2016 APA12_RS10900 67cf66f3ef3f8643fc8f2865710de4ed 486 Gene3D G3DSA:1.20.1250.20 34 242 2.8E-25 T 19-04-2016 APA12_RS10900 67cf66f3ef3f8643fc8f2865710de4ed 486 ProSitePatterns PS00216 Sugar transport proteins signature 1. 319 335 - T 19-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APA12_RS10900 67cf66f3ef3f8643fc8f2865710de4ed 486 Pfam PF07690 Major Facilitator Superfamily 47 406 8.6E-35 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APA12_RS10900 67cf66f3ef3f8643fc8f2865710de4ed 486 PANTHER PTHR23508 9 467 2.7E-262 T 19-04-2016 APA12_RS03830 1b5e0c16661df2ca274137baf4288cb6 430 PANTHER PTHR11647 1 429 1.5E-135 T 19-04-2016 APA12_RS03830 1b5e0c16661df2ca274137baf4288cb6 430 Pfam PF01979 Amidohydrolase family 55 424 4.0E-17 T 19-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APA12_RS03830 1b5e0c16661df2ca274137baf4288cb6 430 PANTHER PTHR11647:SF70 1 429 1.5E-135 T 19-04-2016 APA12_RS03830 1b5e0c16661df2ca274137baf4288cb6 430 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 24 427 6.9E-100 T 19-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 APA12_RS03830 1b5e0c16661df2ca274137baf4288cb6 430 SUPERFAMILY SSF51556 59 367 1.24E-90 T 19-04-2016 IPR032466 Metal-dependent hydrolase APA12_RS03830 1b5e0c16661df2ca274137baf4288cb6 430 Hamap MF_00220_B Dihydroorotase [pyrC]. 3 428 34.767 T 19-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 APA12_RS03830 1b5e0c16661df2ca274137baf4288cb6 430 Gene3D G3DSA:2.30.40.10 381 426 3.0E-13 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APA12_RS03830 1b5e0c16661df2ca274137baf4288cb6 430 Gene3D G3DSA:2.30.40.10 2 59 3.0E-13 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APA12_RS03830 1b5e0c16661df2ca274137baf4288cb6 430 Gene3D G3DSA:3.20.20.140 60 380 3.7E-88 T 19-04-2016 APA12_RS03830 1b5e0c16661df2ca274137baf4288cb6 430 SUPERFAMILY SSF51338 1 58 7.6E-24 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APA12_RS03830 1b5e0c16661df2ca274137baf4288cb6 430 SUPERFAMILY SSF51338 370 429 7.6E-24 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APA12_RS10870 5a45cd2043472ee54a5c94ac1f15c79b 487 PANTHER PTHR32057 17 486 1.1E-166 T 19-04-2016 APA12_RS10870 5a45cd2043472ee54a5c94ac1f15c79b 487 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 4 456 2.7E-127 T 19-04-2016 IPR003846 Uncharacterised protein family UPF0061 APA12_RS10870 5a45cd2043472ee54a5c94ac1f15c79b 487 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 2 473 44.956 T 19-04-2016 IPR003846 Uncharacterised protein family UPF0061 APA12_RS12390 afa8d6701b8d6d929f60a1805a6be8e0 261 SMART SM00382 33 222 4.0E-14 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS12390 afa8d6701b8d6d929f60a1805a6be8e0 261 SUPERFAMILY SSF52540 7 236 4.58E-56 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS12390 afa8d6701b8d6d929f60a1805a6be8e0 261 PANTHER PTHR24220:SF483 10 213 4.2E-82 T 19-04-2016 APA12_RS12390 afa8d6701b8d6d929f60a1805a6be8e0 261 Gene3D G3DSA:3.40.50.300 7 221 8.3E-59 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS12390 afa8d6701b8d6d929f60a1805a6be8e0 261 Pfam PF00005 ABC transporter 25 173 5.2E-29 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS12390 afa8d6701b8d6d929f60a1805a6be8e0 261 PANTHER PTHR24220 10 213 4.2E-82 T 19-04-2016 APA12_RS12390 afa8d6701b8d6d929f60a1805a6be8e0 261 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APA12_RS00380 23d0d8e3f79b1511eee95ae218547b8e 304 PIRSF PIRSF038471 5 278 3.2E-53 T 19-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 APA12_RS00380 23d0d8e3f79b1511eee95ae218547b8e 304 PANTHER PTHR34138:SF1 3 265 9.7E-34 T 19-04-2016 APA12_RS00380 23d0d8e3f79b1511eee95ae218547b8e 304 Pfam PF04085 rod shape-determining protein MreC 126 264 1.7E-23 T 19-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 APA12_RS00380 23d0d8e3f79b1511eee95ae218547b8e 304 PANTHER PTHR34138 3 265 9.7E-34 T 19-04-2016 APA12_RS09555 e9ac827a0e482e718a2c642bca112035 89 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.4E-35 T 19-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS09555 e9ac827a0e482e718a2c642bca112035 89 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.4E-35 T 19-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS09555 e9ac827a0e482e718a2c642bca112035 89 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.4E-35 T 19-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS09555 e9ac827a0e482e718a2c642bca112035 89 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 19-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS09555 e9ac827a0e482e718a2c642bca112035 89 PANTHER PTHR15893 1 85 1.6E-42 T 19-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS09555 e9ac827a0e482e718a2c642bca112035 89 Gene3D G3DSA:2.40.50.100 20 81 6.7E-29 T 19-04-2016 APA12_RS09555 e9ac827a0e482e718a2c642bca112035 89 SUPERFAMILY SSF110324 2 81 1.88E-31 T 19-04-2016 APA12_RS09555 e9ac827a0e482e718a2c642bca112035 89 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 84 3.0E-8 T 19-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS09555 e9ac827a0e482e718a2c642bca112035 89 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 81 7.6E-36 T 19-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS09555 e9ac827a0e482e718a2c642bca112035 89 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 84 27.191 T 19-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS09555 e9ac827a0e482e718a2c642bca112035 89 Pfam PF01016 Ribosomal L27 protein 2 81 3.6E-35 T 19-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS06390 1e636c80034506b94fbbe150d3406fc7 137 SUPERFAMILY SSF88659 66 125 1.4E-11 T 19-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS06390 1e636c80034506b94fbbe150d3406fc7 137 Gene3D G3DSA:1.10.1740.10 1 64 3.6E-11 T 19-04-2016 APA12_RS06390 1e636c80034506b94fbbe150d3406fc7 137 Pfam PF04542 Sigma-70 region 2 1 42 2.0E-6 T 19-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS06390 1e636c80034506b94fbbe150d3406fc7 137 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 1 124 5.2E-15 T 19-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS06390 1e636c80034506b94fbbe150d3406fc7 137 Pfam PF08281 Sigma-70, region 4 69 121 1.1E-10 T 19-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS06390 1e636c80034506b94fbbe150d3406fc7 137 SUPERFAMILY SSF88946 1 56 7.06E-10 T 19-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS06390 1e636c80034506b94fbbe150d3406fc7 137 Gene3D G3DSA:1.10.10.10 66 125 1.3E-15 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS06390 1e636c80034506b94fbbe150d3406fc7 137 PANTHER PTHR30173 1 127 3.0E-20 T 19-04-2016 APA12_RS07365 cb5720c2b49a2eb1b28b6e0320bd1eeb 179 PANTHER PTHR33178:SF2 61 177 6.0E-16 T 19-04-2016 APA12_RS07365 cb5720c2b49a2eb1b28b6e0320bd1eeb 179 PANTHER PTHR33178 61 177 6.0E-16 T 19-04-2016 APA12_RS07365 cb5720c2b49a2eb1b28b6e0320bd1eeb 179 SMART SM00886 66 178 3.3E-21 T 19-04-2016 IPR013097 Stress responsive alpha-beta barrel APA12_RS07365 cb5720c2b49a2eb1b28b6e0320bd1eeb 179 SUPERFAMILY SSF54909 66 178 1.16E-17 T 19-04-2016 IPR011008 Dimeric alpha-beta barrel APA12_RS07365 cb5720c2b49a2eb1b28b6e0320bd1eeb 179 Pfam PF07876 Stress responsive A/B Barrel Domain 66 178 5.5E-23 T 19-04-2016 IPR013097 Stress responsive alpha-beta barrel APA12_RS07365 cb5720c2b49a2eb1b28b6e0320bd1eeb 179 Gene3D G3DSA:3.30.70.900 65 178 1.1E-25 T 19-04-2016 APA12_RS06355 099202c898f02c86ce0b72c38bae41c3 626 Pfam PF09382 RQC domain 425 530 7.5E-34 T 19-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 APA12_RS06355 099202c898f02c86ce0b72c38bae41c3 626 Pfam PF00270 DEAD/DEAH box helicase 44 203 4.8E-21 T 19-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APA12_RS06355 099202c898f02c86ce0b72c38bae41c3 626 SMART SM00341 551 626 4.0E-15 T 19-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 APA12_RS06355 099202c898f02c86ce0b72c38bae41c3 626 Gene3D G3DSA:1.10.150.80 552 621 3.0E-18 T 19-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 APA12_RS06355 099202c898f02c86ce0b72c38bae41c3 626 SUPERFAMILY SSF46785 418 535 2.72E-35 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS06355 099202c898f02c86ce0b72c38bae41c3 626 PANTHER PTHR13710:SF81 29 623 5.1E-246 T 19-04-2016 APA12_RS06355 099202c898f02c86ce0b72c38bae41c3 626 Gene3D G3DSA:3.40.50.300 29 220 2.4E-52 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS06355 099202c898f02c86ce0b72c38bae41c3 626 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 30 480 3.3E-137 T 19-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 APA12_RS06355 099202c898f02c86ce0b72c38bae41c3 626 PANTHER PTHR13710 29 623 5.1E-246 T 19-04-2016 APA12_RS06355 099202c898f02c86ce0b72c38bae41c3 626 SMART SM00956 427 530 3.6E-46 T 19-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 APA12_RS06355 099202c898f02c86ce0b72c38bae41c3 626 Pfam PF00271 Helicase conserved C-terminal domain 241 346 3.9E-17 T 19-04-2016 IPR001650 Helicase, C-terminal APA12_RS06355 099202c898f02c86ce0b72c38bae41c3 626 Gene3D G3DSA:3.40.50.300 221 360 4.7E-42 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS06355 099202c898f02c86ce0b72c38bae41c3 626 Gene3D G3DSA:1.10.10.10 361 533 1.1E-50 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS06355 099202c898f02c86ce0b72c38bae41c3 626 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 29 622 2.8E-217 T 19-04-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 APA12_RS06355 099202c898f02c86ce0b72c38bae41c3 626 SMART SM00487 37 233 1.1E-33 T 19-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APA12_RS06355 099202c898f02c86ce0b72c38bae41c3 626 SUPERFAMILY SSF47819 551 624 2.62E-23 T 19-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 APA12_RS06355 099202c898f02c86ce0b72c38bae41c3 626 Pfam PF16124 RecQ zinc-binding 358 420 1.1E-14 T 19-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain APA12_RS06355 099202c898f02c86ce0b72c38bae41c3 626 Pfam PF00570 HRDC domain 555 621 4.3E-23 T 19-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 APA12_RS06355 099202c898f02c86ce0b72c38bae41c3 626 SUPERFAMILY SSF52540 81 367 3.46E-59 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS06355 099202c898f02c86ce0b72c38bae41c3 626 SMART SM00490 265 346 2.1E-27 T 19-04-2016 IPR001650 Helicase, C-terminal APA12_RS04965 09a7b7569fa75c20544752c02acea8dd 488 PANTHER PTHR21666 82 488 7.2E-19 T 19-04-2016 APA12_RS04965 09a7b7569fa75c20544752c02acea8dd 488 Gene3D G3DSA:2.70.70.10 362 488 2.0E-22 T 19-04-2016 APA12_RS04965 09a7b7569fa75c20544752c02acea8dd 488 PANTHER PTHR21666:SF200 82 488 7.2E-19 T 19-04-2016 APA12_RS04965 09a7b7569fa75c20544752c02acea8dd 488 SUPERFAMILY SSF51261 316 488 1.15E-24 T 19-04-2016 IPR011055 Duplicated hybrid motif APA12_RS04965 09a7b7569fa75c20544752c02acea8dd 488 Pfam PF01551 Peptidase family M23 393 484 8.2E-17 T 19-04-2016 IPR016047 Peptidase M23 APA12_RS13150 13fa5a5f6deebcf82133f54baaf29d83 873 Gene3D G3DSA:3.40.50.300 652 764 3.1E-88 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS13150 13fa5a5f6deebcf82133f54baaf29d83 873 Gene3D G3DSA:3.40.50.300 457 619 3.1E-88 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS13150 13fa5a5f6deebcf82133f54baaf29d83 873 SUPERFAMILY SSF46785 805 870 5.72E-21 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS13150 13fa5a5f6deebcf82133f54baaf29d83 873 SUPERFAMILY SSF52540 485 770 1.6E-46 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS13150 13fa5a5f6deebcf82133f54baaf29d83 873 SMART SM00382 515 720 0.0039 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS13150 13fa5a5f6deebcf82133f54baaf29d83 873 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 24 193 7.4E-24 T 19-04-2016 IPR025199 DNA translocase FtsK, 4TM region APA12_RS13150 13fa5a5f6deebcf82133f54baaf29d83 873 Pfam PF09397 Ftsk gamma domain 808 867 4.1E-26 T 19-04-2016 IPR018541 FtsK gamma domain APA12_RS13150 13fa5a5f6deebcf82133f54baaf29d83 873 PANTHER PTHR22683 371 867 8.5E-230 T 19-04-2016 APA12_RS13150 13fa5a5f6deebcf82133f54baaf29d83 873 Pfam PF01580 FtsK/SpoIIIE family 480 699 2.8E-66 T 19-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 APA12_RS13150 13fa5a5f6deebcf82133f54baaf29d83 873 PANTHER PTHR22683:SF41 371 867 8.5E-230 T 19-04-2016 APA12_RS13150 13fa5a5f6deebcf82133f54baaf29d83 873 SMART SM00843 805 870 2.3E-34 T 19-04-2016 IPR018541 FtsK gamma domain APA12_RS05550 2c4d0eaee9fdf008eacf7bceafac3839 323 PANTHER PTHR13847:SF180 4 320 1.4E-31 T 19-04-2016 APA12_RS05550 2c4d0eaee9fdf008eacf7bceafac3839 323 Pfam PF01266 FAD dependent oxidoreductase 7 317 9.0E-42 T 19-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 APA12_RS05550 2c4d0eaee9fdf008eacf7bceafac3839 323 SUPERFAMILY SSF54373 190 279 1.96E-20 T 19-04-2016 APA12_RS05550 2c4d0eaee9fdf008eacf7bceafac3839 323 PANTHER PTHR13847 4 320 1.4E-31 T 19-04-2016 APA12_RS05550 2c4d0eaee9fdf008eacf7bceafac3839 323 Gene3D G3DSA:3.30.9.10 183 279 3.2E-22 T 19-04-2016 APA12_RS05550 2c4d0eaee9fdf008eacf7bceafac3839 323 Gene3D G3DSA:3.50.50.60 3 75 1.1E-24 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS05550 2c4d0eaee9fdf008eacf7bceafac3839 323 Gene3D G3DSA:3.50.50.60 128 182 1.1E-24 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS05550 2c4d0eaee9fdf008eacf7bceafac3839 323 Gene3D G3DSA:3.50.50.60 281 319 1.1E-24 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS05550 2c4d0eaee9fdf008eacf7bceafac3839 323 SUPERFAMILY SSF51971 266 319 9.18E-30 T 19-04-2016 APA12_RS05550 2c4d0eaee9fdf008eacf7bceafac3839 323 SUPERFAMILY SSF51971 4 205 9.18E-30 T 19-04-2016 APA12_RS05550 2c4d0eaee9fdf008eacf7bceafac3839 323 TIGRFAM TIGR02352 thiamin_ThiO: glycine oxidase ThiO 7 319 1.3E-79 T 19-04-2016 IPR012727 Glycine oxidase ThiO GO:0016491|GO:0050660 UniPathway: UPA00060 APA12_RS11335 084d1a7849521585c3b010cfbb489c6e 434 Pfam PF00375 Sodium:dicarboxylate symporter family 16 409 8.7E-106 T 19-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APA12_RS11335 084d1a7849521585c3b010cfbb489c6e 434 PANTHER PTHR11958:SF49 13 422 2.0E-226 T 19-04-2016 APA12_RS11335 084d1a7849521585c3b010cfbb489c6e 434 Gene3D G3DSA:1.10.3860.10 12 414 4.3E-110 T 19-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APA12_RS11335 084d1a7849521585c3b010cfbb489c6e 434 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 43 58 - T 19-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 APA12_RS11335 084d1a7849521585c3b010cfbb489c6e 434 PANTHER PTHR11958 13 422 2.0E-226 T 19-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APA12_RS11335 084d1a7849521585c3b010cfbb489c6e 434 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 303 326 - T 19-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 APA12_RS11335 084d1a7849521585c3b010cfbb489c6e 434 SUPERFAMILY SSF118215 16 410 9.94E-112 T 19-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APA12_RS11335 084d1a7849521585c3b010cfbb489c6e 434 PRINTS PR00173 Glutamate-aspartate symporter signature 14 34 1.2E-25 T 19-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APA12_RS11335 084d1a7849521585c3b010cfbb489c6e 434 PRINTS PR00173 Glutamate-aspartate symporter signature 335 354 1.2E-25 T 19-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APA12_RS11335 084d1a7849521585c3b010cfbb489c6e 434 PRINTS PR00173 Glutamate-aspartate symporter signature 153 175 1.2E-25 T 19-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APA12_RS11335 084d1a7849521585c3b010cfbb489c6e 434 PRINTS PR00173 Glutamate-aspartate symporter signature 300 326 1.2E-25 T 19-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APA12_RS11335 084d1a7849521585c3b010cfbb489c6e 434 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 1.2E-25 T 19-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APA12_RS11335 084d1a7849521585c3b010cfbb489c6e 434 PRINTS PR00173 Glutamate-aspartate symporter signature 200 219 1.2E-25 T 19-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APA12_RS01005 6dea30ddfb8ee195057c6f1861a2804d 331 SUPERFAMILY SSF51735 4 329 3.82E-64 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS01005 6dea30ddfb8ee195057c6f1861a2804d 331 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 232 1.0E-32 T 19-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 APA12_RS01005 6dea30ddfb8ee195057c6f1861a2804d 331 PANTHER PTHR10366 285 331 1.2E-85 T 19-04-2016 APA12_RS01005 6dea30ddfb8ee195057c6f1861a2804d 331 PANTHER PTHR10366 4 261 1.2E-85 T 19-04-2016 APA12_RS01005 6dea30ddfb8ee195057c6f1861a2804d 331 PANTHER PTHR10366:SF124 285 331 1.2E-85 T 19-04-2016 APA12_RS01005 6dea30ddfb8ee195057c6f1861a2804d 331 PANTHER PTHR10366:SF124 4 261 1.2E-85 T 19-04-2016 APA12_RS01005 6dea30ddfb8ee195057c6f1861a2804d 331 TIGRFAM TIGR03466 HpnA: hopanoid-associated sugar epimerase 4 329 1.3E-146 T 19-04-2016 IPR017829 Hopanoid-associated sugar epimerase KEGG: 00040+1.1.1.21|KEGG: 00051+1.1.1.21|KEGG: 00052+1.1.1.21|KEGG: 00561+1.1.1.21|KEGG: 00941+1.1.1.219|MetaCyc: PWY-5152|MetaCyc: PWY-5515|MetaCyc: PWY-6693|UniPathway: UPA00154 APA12_RS01005 6dea30ddfb8ee195057c6f1861a2804d 331 Gene3D G3DSA:3.40.50.720 3 220 2.0E-50 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS01005 6dea30ddfb8ee195057c6f1861a2804d 331 Gene3D G3DSA:3.90.25.10 221 327 1.6E-11 T 19-04-2016 APA12_RS07455 7e9b7ec0f136a7eae93e56573c872d0e 141 SUPERFAMILY SSF47473 56 137 9.49E-9 T 19-04-2016 IPR011992 EF-hand domain pair APA12_RS07455 7e9b7ec0f136a7eae93e56573c872d0e 141 Gene3D G3DSA:1.10.238.10 80 137 8.7E-5 T 19-04-2016 IPR011992 EF-hand domain pair APA12_RS07455 7e9b7ec0f136a7eae93e56573c872d0e 141 ProSitePatterns PS00018 EF-hand calcium-binding domain. 74 86 - T 19-04-2016 IPR018247 EF-Hand 1, calcium-binding site APA12_RS07455 7e9b7ec0f136a7eae93e56573c872d0e 141 Gene3D G3DSA:1.10.238.10 43 79 1.4E-4 T 19-04-2016 IPR011992 EF-hand domain pair APA12_RS11955 f56dabcffd1ec79204b5bc7982495d83 119 SUPERFAMILY SSF52833 5 116 2.15E-36 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS11955 f56dabcffd1ec79204b5bc7982495d83 119 Gene3D G3DSA:3.40.30.10 5 116 6.2E-44 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS11955 f56dabcffd1ec79204b5bc7982495d83 119 PANTHER PTHR30041 5 118 6.9E-43 T 19-04-2016 APA12_RS11955 f56dabcffd1ec79204b5bc7982495d83 119 PANTHER PTHR30041:SF3 5 118 6.9E-43 T 19-04-2016 APA12_RS11955 f56dabcffd1ec79204b5bc7982495d83 119 Pfam PF03960 ArsC family 8 114 9.9E-18 T 19-04-2016 IPR006660 Arsenate reductase-like APA12_RS11955 f56dabcffd1ec79204b5bc7982495d83 119 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 5 114 1.7E-29 T 19-04-2016 IPR006504 Transcriptional regulator Spx/MgsR APA12_RS04400 134c5fc510616cc00d616f087f4bdc77 195 Gene3D G3DSA:3.40.50.300 1 194 3.5E-58 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS04400 134c5fc510616cc00d616f087f4bdc77 195 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 192 22.686 T 19-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 APA12_RS04400 134c5fc510616cc00d616f087f4bdc77 195 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 3 187 6.8E-35 T 19-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 APA12_RS04400 134c5fc510616cc00d616f087f4bdc77 195 Pfam PF01121 Dephospho-CoA kinase 3 179 2.0E-39 T 19-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 APA12_RS04400 134c5fc510616cc00d616f087f4bdc77 195 SUPERFAMILY SSF52540 1 193 1.36E-29 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS04400 134c5fc510616cc00d616f087f4bdc77 195 PANTHER PTHR10695 1 194 3.3E-47 T 19-04-2016 APA12_RS01390 cc07dd74ec47ff9446d05564786485a7 349 TIGRFAM TIGR00238 TIGR00238: KamA family protein 13 318 4.7E-77 T 19-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase APA12_RS01390 cc07dd74ec47ff9446d05564786485a7 349 Gene3D G3DSA:3.20.20.70 94 307 2.6E-17 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS01390 cc07dd74ec47ff9446d05564786485a7 349 Pfam PF12544 Lysine-2,3-aminomutase 299 330 4.5E-6 T 19-04-2016 IPR025895 Lysine-2,3-aminomutase, C-terminal domain APA12_RS01390 cc07dd74ec47ff9446d05564786485a7 349 SUPERFAMILY SSF102114 90 333 4.32E-32 T 19-04-2016 APA12_RS01390 cc07dd74ec47ff9446d05564786485a7 349 TIGRFAM TIGR03822 AblA_like_2: lysine-2,3-aminomutase-related protein 15 331 3.7E-149 T 19-04-2016 IPR022447 Lysine-2,3-aminomutase-related APA12_RS01390 cc07dd74ec47ff9446d05564786485a7 349 PIRSF PIRSF004911 8 346 8.8E-115 T 19-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase APA12_RS01390 cc07dd74ec47ff9446d05564786485a7 349 PANTHER PTHR30538:SF1 12 330 8.8E-105 T 19-04-2016 APA12_RS01390 cc07dd74ec47ff9446d05564786485a7 349 PANTHER PTHR30538 12 330 8.8E-105 T 19-04-2016 APA12_RS01390 cc07dd74ec47ff9446d05564786485a7 349 Pfam PF04055 Radical SAM superfamily 107 257 1.3E-10 T 19-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APA12_RS01390 cc07dd74ec47ff9446d05564786485a7 349 Pfam PF13353 4Fe-4S single cluster domain 110 161 1.9E-5 T 19-04-2016 APA12_RS12575 3ed011a0fce6bc1f4ea98ead5752bfa3 238 Gene3D G3DSA:1.20.58.220 126 223 4.5E-32 T 19-04-2016 APA12_RS12575 3ed011a0fce6bc1f4ea98ead5752bfa3 238 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 11 218 4.4E-68 T 19-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 APA12_RS12575 3ed011a0fce6bc1f4ea98ead5752bfa3 238 Gene3D G3DSA:1.20.58.220 7 114 2.0E-29 T 19-04-2016 APA12_RS12575 3ed011a0fce6bc1f4ea98ead5752bfa3 238 PIRSF PIRSF003107 6 223 4.9E-63 T 19-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 APA12_RS12575 3ed011a0fce6bc1f4ea98ead5752bfa3 238 PANTHER PTHR10010:SF14 3 220 2.4E-70 T 19-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 APA12_RS12575 3ed011a0fce6bc1f4ea98ead5752bfa3 238 PANTHER PTHR10010 3 220 2.4E-70 T 19-04-2016 APA12_RS12575 3ed011a0fce6bc1f4ea98ead5752bfa3 238 SUPERFAMILY SSF109755 10 224 4.81E-68 T 19-04-2016 APA12_RS12575 3ed011a0fce6bc1f4ea98ead5752bfa3 238 Pfam PF01895 PhoU domain 24 110 1.7E-18 T 19-04-2016 IPR026022 PhoU domain APA12_RS12575 3ed011a0fce6bc1f4ea98ead5752bfa3 238 Pfam PF01895 PhoU domain 126 211 2.6E-20 T 19-04-2016 IPR026022 PhoU domain APA12_RS11395 2d1692cdc2cb3d03f1732c06a09d19a6 329 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 32 291 5.9E-62 T 19-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 APA12_RS11395 2d1692cdc2cb3d03f1732c06a09d19a6 329 Pfam PF03186 CobD/Cbib protein 14 306 5.7E-89 T 19-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 APA12_RS11395 2d1692cdc2cb3d03f1732c06a09d19a6 329 PANTHER PTHR34308 1 329 2.4E-81 T 19-04-2016 APA12_RS11395 2d1692cdc2cb3d03f1732c06a09d19a6 329 PANTHER PTHR34308:SF1 1 329 2.4E-81 T 19-04-2016 APA12_RS11395 2d1692cdc2cb3d03f1732c06a09d19a6 329 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 329 86.504 T 19-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 APA12_RS05430 36addbc3de3a8fcf4569120ebf23a192 314 Gene3D G3DSA:3.10.580.10 62 189 3.4E-19 T 19-04-2016 APA12_RS05430 36addbc3de3a8fcf4569120ebf23a192 314 Pfam PF00571 CBS domain 143 195 1.0E-6 T 19-04-2016 IPR000644 CBS domain APA12_RS05430 36addbc3de3a8fcf4569120ebf23a192 314 Pfam PF00571 CBS domain 82 133 3.6E-7 T 19-04-2016 IPR000644 CBS domain APA12_RS05430 36addbc3de3a8fcf4569120ebf23a192 314 SMART SM00116 147 195 8.0 T 19-04-2016 IPR000644 CBS domain APA12_RS05430 36addbc3de3a8fcf4569120ebf23a192 314 SMART SM00116 85 134 1.7 T 19-04-2016 IPR000644 CBS domain APA12_RS05430 36addbc3de3a8fcf4569120ebf23a192 314 Pfam PF03471 Transporter associated domain 213 293 3.1E-17 T 19-04-2016 IPR005170 Transporter-associated domain APA12_RS05430 36addbc3de3a8fcf4569120ebf23a192 314 Gene3D G3DSA:3.30.465.10 190 293 4.3E-25 T 19-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APA12_RS05430 36addbc3de3a8fcf4569120ebf23a192 314 SMART SM01091 211 294 2.7E-25 T 19-04-2016 IPR005170 Transporter-associated domain APA12_RS05430 36addbc3de3a8fcf4569120ebf23a192 314 SUPERFAMILY SSF54631 71 206 5.81E-32 T 19-04-2016 APA12_RS05430 36addbc3de3a8fcf4569120ebf23a192 314 PANTHER PTHR22777 53 304 9.4E-85 T 19-04-2016 APA12_RS05430 36addbc3de3a8fcf4569120ebf23a192 314 SUPERFAMILY SSF56176 210 298 1.25E-18 T 19-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APA12_RS04960 a5ba7a39f9357d2bcb079fb27245abc8 481 PANTHER PTHR32060 65 454 2.3E-121 T 19-04-2016 APA12_RS04960 a5ba7a39f9357d2bcb079fb27245abc8 481 Gene3D G3DSA:2.30.42.10 122 198 1.1E-27 T 19-04-2016 IPR001478 PDZ domain GO:0005515 APA12_RS04960 a5ba7a39f9357d2bcb079fb27245abc8 481 Gene3D G3DSA:3.30.750.44 67 121 2.9E-9 T 19-04-2016 APA12_RS04960 a5ba7a39f9357d2bcb079fb27245abc8 481 SMART SM00228 116 187 3.5E-16 T 19-04-2016 IPR001478 PDZ domain GO:0005515 APA12_RS04960 a5ba7a39f9357d2bcb079fb27245abc8 481 SUPERFAMILY SSF52096 57 134 1.56E-81 T 19-04-2016 IPR029045 ClpP/crotonase-like domain APA12_RS04960 a5ba7a39f9357d2bcb079fb27245abc8 481 SUPERFAMILY SSF52096 207 395 1.56E-81 T 19-04-2016 IPR029045 ClpP/crotonase-like domain APA12_RS04960 a5ba7a39f9357d2bcb079fb27245abc8 481 SUPERFAMILY SSF50156 104 199 2.2E-20 T 19-04-2016 IPR001478 PDZ domain GO:0005515 APA12_RS04960 a5ba7a39f9357d2bcb079fb27245abc8 481 Gene3D G3DSA:3.90.226.10 199 382 2.7E-64 T 19-04-2016 IPR029045 ClpP/crotonase-like domain APA12_RS04960 a5ba7a39f9357d2bcb079fb27245abc8 481 Gene3D G3DSA:3.90.226.10 433 451 2.7E-64 T 19-04-2016 IPR029045 ClpP/crotonase-like domain APA12_RS04960 a5ba7a39f9357d2bcb079fb27245abc8 481 Pfam PF13180 PDZ domain 116 196 4.2E-11 T 19-04-2016 IPR001478 PDZ domain GO:0005515 APA12_RS04960 a5ba7a39f9357d2bcb079fb27245abc8 481 SMART SM00245 189 380 4.6E-79 T 19-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 APA12_RS04960 a5ba7a39f9357d2bcb079fb27245abc8 481 Pfam PF03572 Peptidase family S41 213 379 1.6E-55 T 19-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 APA12_RS04960 a5ba7a39f9357d2bcb079fb27245abc8 481 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 68 385 8.3E-102 T 19-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 APA12_RS04065 961a40b370264d39e686ae35d106fd5c 407 PANTHER PTHR19271 45 403 2.1E-103 T 19-04-2016 APA12_RS04065 961a40b370264d39e686ae35d106fd5c 407 Pfam PF00033 Cytochrome b/b6/petB 46 230 1.1E-50 T 19-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 APA12_RS04065 961a40b370264d39e686ae35d106fd5c 407 Gene3D G3DSA:1.20.810.10 39 404 5.3E-117 T 19-04-2016 IPR027387 Cytochrome b/b6-like domain APA12_RS04065 961a40b370264d39e686ae35d106fd5c 407 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 286 389 6.5E-26 T 19-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 APA12_RS04065 961a40b370264d39e686ae35d106fd5c 407 SUPERFAMILY SSF81648 289 404 2.62E-22 T 19-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 APA12_RS04065 961a40b370264d39e686ae35d106fd5c 407 SUPERFAMILY SSF81342 39 288 1.13E-76 T 19-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 APA12_RS02140 ebd9967a65f48cfe9f8e5208c6b1801b 337 Pfam PF01032 FecCD transport family 17 323 1.0E-73 T 19-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APA12_RS02140 ebd9967a65f48cfe9f8e5208c6b1801b 337 PANTHER PTHR30472 4 336 4.2E-73 T 19-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APA12_RS02140 ebd9967a65f48cfe9f8e5208c6b1801b 337 SUPERFAMILY SSF81345 5 324 2.35E-62 T 19-04-2016 IPR029022 ABC transporter, BtuC-like APA12_RS02140 ebd9967a65f48cfe9f8e5208c6b1801b 337 Gene3D G3DSA:1.10.3470.10 4 331 3.4E-88 T 19-04-2016 IPR029022 ABC transporter, BtuC-like APA12_RS04800 ebcdc004733350186a05ef6430eb85d7 162 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 150 1.1E-46 T 19-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 APA12_RS04800 ebcdc004733350186a05ef6430eb85d7 162 ProSitePatterns PS00475 Ribosomal protein L15 signature. 116 146 - T 19-04-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04800 ebcdc004733350186a05ef6430eb85d7 162 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 27 150 9.7E-34 T 19-04-2016 IPR021131 Ribosomal protein L18e/L15P APA12_RS04800 ebcdc004733350186a05ef6430eb85d7 162 SUPERFAMILY SSF52080 4 151 1.31E-40 T 19-04-2016 IPR021131 Ribosomal protein L18e/L15P APA12_RS04800 ebcdc004733350186a05ef6430eb85d7 162 Gene3D G3DSA:3.100.10.10 32 153 5.2E-26 T 19-04-2016 APA12_RS04800 ebcdc004733350186a05ef6430eb85d7 162 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 152 20.275 T 19-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 APA12_RS04800 ebcdc004733350186a05ef6430eb85d7 162 PANTHER PTHR12934 1 152 7.5E-63 T 19-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 APA12_RS08395 1b0264e4850515fca29ce8b7eabb467b 122 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 103 120 - T 19-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site APA12_RS08395 1b0264e4850515fca29ce8b7eabb467b 122 PANTHER PTHR10072:SF41 1 122 7.8E-38 T 19-04-2016 APA12_RS08395 1b0264e4850515fca29ce8b7eabb467b 122 PANTHER PTHR10072 1 122 7.8E-38 T 19-04-2016 APA12_RS08395 1b0264e4850515fca29ce8b7eabb467b 122 Gene3D G3DSA:2.60.300.12 18 111 1.1E-29 T 19-04-2016 IPR000361 FeS cluster biogenesis APA12_RS08395 1b0264e4850515fca29ce8b7eabb467b 122 Pfam PF01521 Iron-sulphur cluster biosynthesis 19 118 1.7E-18 T 19-04-2016 IPR000361 FeS cluster biogenesis APA12_RS08395 1b0264e4850515fca29ce8b7eabb467b 122 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 19 122 3.5E-32 T 19-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 APA12_RS08395 1b0264e4850515fca29ce8b7eabb467b 122 SUPERFAMILY SSF89360 18 111 1.14E-25 T 19-04-2016 IPR000361 FeS cluster biogenesis APA12_RS08420 1d5631efaed4472b9a7a49fabbd1799b 256 SMART SM00382 33 230 9.4E-5 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS08420 1d5631efaed4472b9a7a49fabbd1799b 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APA12_RS08420 1d5631efaed4472b9a7a49fabbd1799b 256 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 5 250 4.9E-104 T 19-04-2016 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 APA12_RS08420 1d5631efaed4472b9a7a49fabbd1799b 256 PANTHER PTHR24220:SF85 6 248 4.5E-120 T 19-04-2016 APA12_RS08420 1d5631efaed4472b9a7a49fabbd1799b 256 PANTHER PTHR24220 6 248 4.5E-120 T 19-04-2016 APA12_RS08420 1d5631efaed4472b9a7a49fabbd1799b 256 SUPERFAMILY SSF52540 5 238 4.15E-42 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS08420 1d5631efaed4472b9a7a49fabbd1799b 256 Gene3D G3DSA:3.40.50.300 3 252 4.9E-45 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS08420 1d5631efaed4472b9a7a49fabbd1799b 256 Pfam PF00005 ABC transporter 24 179 5.6E-20 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS11935 89697259e3151b3ba770cb94fa0cb102 197 Gene3D G3DSA:3.40.50.1240 71 192 1.0E-9 T 19-04-2016 IPR029033 Histidine phosphatase superfamily APA12_RS11935 89697259e3151b3ba770cb94fa0cb102 197 SUPERFAMILY SSF53254 70 193 4.07E-10 T 19-04-2016 IPR029033 Histidine phosphatase superfamily APA12_RS11935 89697259e3151b3ba770cb94fa0cb102 197 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 72 193 3.9E-8 T 19-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APA12_RS08155 091933db5fc6863f85b6a5f9dce1b0a2 262 Pfam PF04116 Fatty acid hydroxylase superfamily 65 207 1.9E-20 T 19-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 APA12_RS13185 a72ee6be033478eee9ff94879d91e9c7 385 Gene3D G3DSA:3.90.1150.10 252 368 3.2E-27 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APA12_RS13185 a72ee6be033478eee9ff94879d91e9c7 385 SUPERFAMILY SSF53383 5 366 5.53E-82 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APA12_RS13185 a72ee6be033478eee9ff94879d91e9c7 385 PANTHER PTHR11601:SF20 15 366 3.8E-102 T 19-04-2016 APA12_RS13185 a72ee6be033478eee9ff94879d91e9c7 385 PIRSF PIRSF005572 12 377 2.7E-106 T 19-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 APA12_RS13185 a72ee6be033478eee9ff94879d91e9c7 385 PANTHER PTHR11601 15 366 3.8E-102 T 19-04-2016 APA12_RS13185 a72ee6be033478eee9ff94879d91e9c7 385 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 315 331 - T 19-04-2016 IPR018201 Beta-ketoacyl synthase, active site APA12_RS13185 a72ee6be033478eee9ff94879d91e9c7 385 Gene3D G3DSA:3.40.640.10 27 251 3.1E-68 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APA12_RS13185 a72ee6be033478eee9ff94879d91e9c7 385 Pfam PF00266 Aminotransferase class-V 15 364 2.6E-56 T 19-04-2016 IPR000192 Aminotransferase class V domain APA12_RS11230 3e9b2d902a93e5be7bc8414d503f0b09 317 Pfam PF03466 LysR substrate binding domain 90 296 2.9E-37 T 19-04-2016 IPR005119 LysR, substrate-binding APA12_RS11230 3e9b2d902a93e5be7bc8414d503f0b09 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 4.5E-18 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS11230 3e9b2d902a93e5be7bc8414d503f0b09 317 PANTHER PTHR30346 1 314 5.5E-72 T 19-04-2016 APA12_RS11230 3e9b2d902a93e5be7bc8414d503f0b09 317 Gene3D G3DSA:1.10.10.10 2 82 1.5E-24 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS11230 3e9b2d902a93e5be7bc8414d503f0b09 317 SUPERFAMILY SSF46785 2 113 8.72E-23 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS11230 3e9b2d902a93e5be7bc8414d503f0b09 317 PANTHER PTHR30346:SF13 1 314 5.5E-72 T 19-04-2016 APA12_RS11230 3e9b2d902a93e5be7bc8414d503f0b09 317 Gene3D G3DSA:3.40.190.10 186 269 2.6E-30 T 19-04-2016 APA12_RS11230 3e9b2d902a93e5be7bc8414d503f0b09 317 SUPERFAMILY SSF53850 91 299 6.05E-34 T 19-04-2016 APA12_RS11230 3e9b2d902a93e5be7bc8414d503f0b09 317 Gene3D G3DSA:3.40.190.10 91 185 7.6E-20 T 19-04-2016 APA12_RS08000 73a9dc7a03ec434c52b7fe2bd912f4bc 208 PIRSF PIRSF022704 15 208 7.0E-71 T 19-04-2016 IPR015987 Uncharacterised conserved protein UCP022704 APA12_RS08000 73a9dc7a03ec434c52b7fe2bd912f4bc 208 SUPERFAMILY SSF49899 24 198 2.61E-27 T 19-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APA12_RS08000 73a9dc7a03ec434c52b7fe2bd912f4bc 208 Pfam PF07081 Protein of unknown function (DUF1349) 24 198 2.2E-62 T 19-04-2016 IPR009784 Protein of unknown function DUF1349 APA12_RS08000 73a9dc7a03ec434c52b7fe2bd912f4bc 208 Gene3D G3DSA:2.60.120.200 24 198 9.0E-18 T 19-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APA12_RS08000 73a9dc7a03ec434c52b7fe2bd912f4bc 208 PANTHER PTHR35332 16 207 1.9E-58 T 19-04-2016 APA12_RS08000 73a9dc7a03ec434c52b7fe2bd912f4bc 208 PANTHER PTHR35332:SF2 16 207 1.9E-58 T 19-04-2016 APA12_RS02900 4822da0cb748c2db50352fb18b83eb82 253 SMART SM00893 23 215 8.7E-59 T 19-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 APA12_RS02900 4822da0cb748c2db50352fb18b83eb82 253 PANTHER PTHR21294 1 253 5.6E-146 T 19-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 APA12_RS02900 4822da0cb748c2db50352fb18b83eb82 253 SUPERFAMILY SSF52402 1 246 6.77E-83 T 19-04-2016 APA12_RS02900 4822da0cb748c2db50352fb18b83eb82 253 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 159 179 - T 19-04-2016 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 APA12_RS02900 4822da0cb748c2db50352fb18b83eb82 253 PANTHER PTHR21294:SF8 1 253 5.6E-146 T 19-04-2016 APA12_RS02900 4822da0cb748c2db50352fb18b83eb82 253 Gene3D G3DSA:3.40.50.620 1 250 1.9E-101 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS02900 4822da0cb748c2db50352fb18b83eb82 253 Pfam PF01012 Electron transfer flavoprotein domain 26 209 1.2E-43 T 19-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 APA12_RS02900 4822da0cb748c2db50352fb18b83eb82 253 PIRSF PIRSF000090 1 253 1.7E-81 T 19-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 APA12_RS08585 d17febe13f60d76896126c823a3842a3 516 Pfam PF03023 MviN-like protein 26 464 5.0E-108 T 19-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APA12_RS08585 d17febe13f60d76896126c823a3842a3 516 PANTHER PTHR11206 215 440 7.4E-57 T 19-04-2016 APA12_RS08585 d17febe13f60d76896126c823a3842a3 516 PANTHER PTHR11206 46 55 7.4E-57 T 19-04-2016 APA12_RS08585 d17febe13f60d76896126c823a3842a3 516 PANTHER PTHR11206 72 77 7.4E-57 T 19-04-2016 APA12_RS08585 d17febe13f60d76896126c823a3842a3 516 PANTHER PTHR11206:SF90 215 440 7.4E-57 T 19-04-2016 APA12_RS08585 d17febe13f60d76896126c823a3842a3 516 PANTHER PTHR11206:SF90 46 55 7.4E-57 T 19-04-2016 APA12_RS08585 d17febe13f60d76896126c823a3842a3 516 PANTHER PTHR11206:SF90 72 77 7.4E-57 T 19-04-2016 APA12_RS08585 d17febe13f60d76896126c823a3842a3 516 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 501 3.7E-120 T 19-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APA12_RS08585 d17febe13f60d76896126c823a3842a3 516 PRINTS PR01806 Virulence factor MviN signature 155 176 6.8E-62 T 19-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APA12_RS08585 d17febe13f60d76896126c823a3842a3 516 PRINTS PR01806 Virulence factor MviN signature 407 424 6.8E-62 T 19-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APA12_RS08585 d17febe13f60d76896126c823a3842a3 516 PRINTS PR01806 Virulence factor MviN signature 131 155 6.8E-62 T 19-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APA12_RS08585 d17febe13f60d76896126c823a3842a3 516 PRINTS PR01806 Virulence factor MviN signature 31 50 6.8E-62 T 19-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APA12_RS08585 d17febe13f60d76896126c823a3842a3 516 PRINTS PR01806 Virulence factor MviN signature 257 283 6.8E-62 T 19-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APA12_RS08585 d17febe13f60d76896126c823a3842a3 516 PRINTS PR01806 Virulence factor MviN signature 355 374 6.8E-62 T 19-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APA12_RS08585 d17febe13f60d76896126c823a3842a3 516 PRINTS PR01806 Virulence factor MviN signature 50 66 6.8E-62 T 19-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APA12_RS08585 d17febe13f60d76896126c823a3842a3 516 PIRSF PIRSF002869 1 509 9.8E-149 T 19-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APA12_RS01475 3a220bf7696dc9ee5a0276a4eb1a92ff 395 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 8 392 3.7E-144 T 19-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APA12_RS01475 3a220bf7696dc9ee5a0276a4eb1a92ff 395 PANTHER PTHR11964 6 388 8.2E-192 T 19-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APA12_RS01475 3a220bf7696dc9ee5a0276a4eb1a92ff 395 SUPERFAMILY SSF55973 238 393 4.71E-62 T 19-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APA12_RS01475 3a220bf7696dc9ee5a0276a4eb1a92ff 395 SUPERFAMILY SSF55973 6 113 3.22E-36 T 19-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APA12_RS01475 3a220bf7696dc9ee5a0276a4eb1a92ff 395 Gene3D G3DSA:3.30.300.10 140 238 9.8E-31 T 19-04-2016 APA12_RS01475 3a220bf7696dc9ee5a0276a4eb1a92ff 395 Gene3D G3DSA:3.30.300.10 249 393 5.3E-63 T 19-04-2016 APA12_RS01475 3a220bf7696dc9ee5a0276a4eb1a92ff 395 Pfam PF02772 S-adenosylmethionine synthetase, central domain 119 236 4.0E-35 T 19-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APA12_RS01475 3a220bf7696dc9ee5a0276a4eb1a92ff 395 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 7 105 1.7E-35 T 19-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APA12_RS01475 3a220bf7696dc9ee5a0276a4eb1a92ff 395 SUPERFAMILY SSF55973 116 237 2.79E-40 T 19-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APA12_RS01475 3a220bf7696dc9ee5a0276a4eb1a92ff 395 PANTHER PTHR11964:SF1 6 388 8.2E-192 T 19-04-2016 APA12_RS01475 3a220bf7696dc9ee5a0276a4eb1a92ff 395 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 238 382 1.2E-61 T 19-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APA12_RS01475 3a220bf7696dc9ee5a0276a4eb1a92ff 395 Gene3D G3DSA:3.30.300.10 14 139 1.9E-36 T 19-04-2016 APA12_RS01475 3a220bf7696dc9ee5a0276a4eb1a92ff 395 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 5 393 47.302 T 19-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APA12_RS01475 3a220bf7696dc9ee5a0276a4eb1a92ff 395 PIRSF PIRSF000497 1 394 3.5E-152 T 19-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APA12_RS01475 3a220bf7696dc9ee5a0276a4eb1a92ff 395 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 264 272 - T 19-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APA12_RS01475 3a220bf7696dc9ee5a0276a4eb1a92ff 395 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 120 130 - T 19-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APA12_RS04085 dc24e963e2bc3b678afe1e2728b6fa97 211 Pfam PF01810 LysE type translocator 18 211 1.1E-28 T 19-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APA12_RS04085 dc24e963e2bc3b678afe1e2728b6fa97 211 PANTHER PTHR30086 1 210 1.7E-33 T 19-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APA12_RS10390 0951eafe2240143456fb79191dd26e24 253 PANTHER PTHR24321:SF6 2 252 1.8E-53 T 19-04-2016 APA12_RS10390 0951eafe2240143456fb79191dd26e24 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 2.0E-42 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS10390 0951eafe2240143456fb79191dd26e24 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 2.0E-42 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS10390 0951eafe2240143456fb79191dd26e24 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 2.0E-42 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS10390 0951eafe2240143456fb79191dd26e24 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.0E-42 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS10390 0951eafe2240143456fb79191dd26e24 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.0E-42 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS10390 0951eafe2240143456fb79191dd26e24 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 2.0E-42 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS10390 0951eafe2240143456fb79191dd26e24 253 PANTHER PTHR24321 2 252 1.8E-53 T 19-04-2016 APA12_RS10390 0951eafe2240143456fb79191dd26e24 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 19-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APA12_RS10390 0951eafe2240143456fb79191dd26e24 253 Gene3D G3DSA:3.40.50.720 2 252 2.2E-89 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS10390 0951eafe2240143456fb79191dd26e24 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 8.0E-12 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS10390 0951eafe2240143456fb79191dd26e24 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 8.0E-12 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS10390 0951eafe2240143456fb79191dd26e24 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 8.0E-12 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS10390 0951eafe2240143456fb79191dd26e24 253 SUPERFAMILY SSF51735 6 252 3.12E-84 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS10390 0951eafe2240143456fb79191dd26e24 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 251 2.4E-73 T 19-04-2016 APA12_RS01925 d7aae5d1394457fa823f1159f2d23fed 564 SUPERFAMILY SSF52467 202 346 8.72E-23 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APA12_RS01925 d7aae5d1394457fa823f1159f2d23fed 564 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 431 559 3.5E-29 T 19-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 APA12_RS01925 d7aae5d1394457fa823f1159f2d23fed 564 Gene3D G3DSA:3.40.50.970 13 180 2.0E-46 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS01925 d7aae5d1394457fa823f1159f2d23fed 564 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 15 179 1.9E-45 T 19-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 APA12_RS01925 d7aae5d1394457fa823f1159f2d23fed 564 Gene3D G3DSA:3.40.50.970 363 562 2.0E-43 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS01925 d7aae5d1394457fa823f1159f2d23fed 564 PANTHER PTHR18968:SF133 20 562 2.5E-133 T 19-04-2016 APA12_RS01925 d7aae5d1394457fa823f1159f2d23fed 564 SUPERFAMILY SSF52518 11 186 9.06E-43 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS01925 d7aae5d1394457fa823f1159f2d23fed 564 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 213 337 2.3E-13 T 19-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 APA12_RS01925 d7aae5d1394457fa823f1159f2d23fed 564 PANTHER PTHR18968 20 562 2.5E-133 T 19-04-2016 APA12_RS01925 d7aae5d1394457fa823f1159f2d23fed 564 Gene3D G3DSA:3.40.50.1220 204 349 2.9E-31 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APA12_RS01925 d7aae5d1394457fa823f1159f2d23fed 564 SUPERFAMILY SSF52518 375 562 1.11E-37 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS03130 0e3ebfa8aafb712b36d86782fba4f2cc 384 Gene3D G3DSA:1.20.1250.20 210 383 1.9E-14 T 19-04-2016 APA12_RS03130 0e3ebfa8aafb712b36d86782fba4f2cc 384 Gene3D G3DSA:1.20.1250.20 18 190 3.4E-17 T 19-04-2016 APA12_RS03130 0e3ebfa8aafb712b36d86782fba4f2cc 384 PANTHER PTHR23521 10 376 1.9E-47 T 19-04-2016 APA12_RS03130 0e3ebfa8aafb712b36d86782fba4f2cc 384 Pfam PF07690 Major Facilitator Superfamily 22 189 5.7E-12 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APA12_RS03130 0e3ebfa8aafb712b36d86782fba4f2cc 384 Pfam PF07690 Major Facilitator Superfamily 213 380 2.2E-13 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APA12_RS03130 0e3ebfa8aafb712b36d86782fba4f2cc 384 SUPERFAMILY SSF103473 17 381 6.15E-35 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS11445 ec3dae426bf53c88111209e4aaf7a8ed 172 SUPERFAMILY SSF46785 31 168 9.26E-29 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS11445 ec3dae426bf53c88111209e4aaf7a8ed 172 Gene3D G3DSA:1.10.10.10 32 166 5.9E-29 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS11445 ec3dae426bf53c88111209e4aaf7a8ed 172 SMART SM00347 54 155 1.1E-17 T 19-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APA12_RS11445 ec3dae426bf53c88111209e4aaf7a8ed 172 Pfam PF01047 MarR family 78 119 8.9E-11 T 19-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APA12_RS11445 ec3dae426bf53c88111209e4aaf7a8ed 172 PANTHER PTHR33164 6 167 2.3E-18 T 19-04-2016 APA12_RS11445 ec3dae426bf53c88111209e4aaf7a8ed 172 PRINTS PR00598 Bacterial regulatory protein MarR family signature 96 111 4.1E-9 T 19-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APA12_RS11445 ec3dae426bf53c88111209e4aaf7a8ed 172 PRINTS PR00598 Bacterial regulatory protein MarR family signature 79 95 4.1E-9 T 19-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APA12_RS11445 ec3dae426bf53c88111209e4aaf7a8ed 172 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 131 4.1E-9 T 19-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APA12_RS11660 76f0b1cfd3d229657cd793b0bec2eb1c 326 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 320 4.6E-109 T 19-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 APA12_RS11660 76f0b1cfd3d229657cd793b0bec2eb1c 326 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 247 6.3E-36 T 19-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 APA12_RS11660 76f0b1cfd3d229657cd793b0bec2eb1c 326 SUPERFAMILY SSF51735 2 320 2.13E-57 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS11660 76f0b1cfd3d229657cd793b0bec2eb1c 326 Gene3D G3DSA:3.40.50.720 2 180 2.5E-24 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS11660 76f0b1cfd3d229657cd793b0bec2eb1c 326 PANTHER PTHR10366 1 320 3.3E-88 T 19-04-2016 APA12_RS11660 76f0b1cfd3d229657cd793b0bec2eb1c 326 PANTHER PTHR10366:SF469 1 320 3.3E-88 T 19-04-2016 APA12_RS11660 76f0b1cfd3d229657cd793b0bec2eb1c 326 Gene3D G3DSA:3.90.25.10 181 301 1.7E-28 T 19-04-2016 APA12_RS07700 0c64ca3cef810ce1d0643d5e411039ec 259 Gene3D G3DSA:3.40.50.80 128 255 2.4E-35 T 19-04-2016 APA12_RS07700 0c64ca3cef810ce1d0643d5e411039ec 259 Pfam PF08021 Siderophore-interacting FAD-binding domain 74 123 2.0E-15 T 19-04-2016 IPR013113 FAD-binding 9, siderophore-interacting APA12_RS07700 0c64ca3cef810ce1d0643d5e411039ec 259 Pfam PF08021 Siderophore-interacting FAD-binding domain 29 67 7.3E-10 T 19-04-2016 IPR013113 FAD-binding 9, siderophore-interacting APA12_RS07700 0c64ca3cef810ce1d0643d5e411039ec 259 PANTHER PTHR30157:SF1 10 258 7.8E-74 T 19-04-2016 APA12_RS07700 0c64ca3cef810ce1d0643d5e411039ec 259 Gene3D G3DSA:2.40.30.10 19 122 3.0E-34 T 19-04-2016 APA12_RS07700 0c64ca3cef810ce1d0643d5e411039ec 259 Pfam PF04954 Siderophore-interacting protein 132 248 1.3E-28 T 19-04-2016 IPR007037 Siderophore-interacting protein APA12_RS07700 0c64ca3cef810ce1d0643d5e411039ec 259 PANTHER PTHR30157 10 258 7.8E-74 T 19-04-2016 APA12_RS07700 0c64ca3cef810ce1d0643d5e411039ec 259 SUPERFAMILY SSF63380 18 125 1.02E-18 T 19-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APA12_RS08500 bb0098ae2b79028e97890b95e89370c6 466 Gene3D G3DSA:3.40.50.1100 111 202 1.7E-8 T 19-04-2016 APA12_RS08500 bb0098ae2b79028e97890b95e89370c6 466 Gene3D G3DSA:3.40.50.1100 203 435 1.1E-87 T 19-04-2016 APA12_RS08500 bb0098ae2b79028e97890b95e89370c6 466 Pfam PF14821 Threonine synthase N terminus 2 80 2.7E-25 T 19-04-2016 IPR029144 Threonine synthase, N-terminal APA12_RS08500 bb0098ae2b79028e97890b95e89370c6 466 PANTHER PTHR10314 53 329 3.8E-144 T 19-04-2016 APA12_RS08500 bb0098ae2b79028e97890b95e89370c6 466 PANTHER PTHR10314 361 466 3.8E-144 T 19-04-2016 APA12_RS08500 bb0098ae2b79028e97890b95e89370c6 466 PANTHER PTHR10314 25 36 3.8E-144 T 19-04-2016 APA12_RS08500 bb0098ae2b79028e97890b95e89370c6 466 Gene3D G3DSA:3.90.1380.10 1 85 1.3E-28 T 19-04-2016 IPR029144 Threonine synthase, N-terminal APA12_RS08500 bb0098ae2b79028e97890b95e89370c6 466 PANTHER PTHR10314:SF1 53 329 3.8E-144 T 19-04-2016 APA12_RS08500 bb0098ae2b79028e97890b95e89370c6 466 PANTHER PTHR10314:SF1 361 466 3.8E-144 T 19-04-2016 APA12_RS08500 bb0098ae2b79028e97890b95e89370c6 466 PANTHER PTHR10314:SF1 25 36 3.8E-144 T 19-04-2016 APA12_RS08500 bb0098ae2b79028e97890b95e89370c6 466 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 102 116 - T 19-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 APA12_RS08500 bb0098ae2b79028e97890b95e89370c6 466 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 93 396 8.9E-24 T 19-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APA12_RS08500 bb0098ae2b79028e97890b95e89370c6 466 TIGRFAM TIGR00260 thrC: threonine synthase 73 425 3.3E-84 T 19-04-2016 IPR004450 Threonine synthase-like APA12_RS08500 bb0098ae2b79028e97890b95e89370c6 466 SUPERFAMILY SSF53686 1 459 9.05E-161 T 19-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APA12_RS13425 090eec164fdce416cdae9426b9e7da9d 198 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 159 171 - T 19-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 APA12_RS13425 090eec164fdce416cdae9426b9e7da9d 198 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 5 198 43.848 T 19-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 APA12_RS13425 090eec164fdce416cdae9426b9e7da9d 198 PANTHER PTHR23133:SF2 1 198 2.5E-107 T 19-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 APA12_RS13425 090eec164fdce416cdae9426b9e7da9d 198 Gene3D G3DSA:3.30.230.40 93 198 3.3E-31 T 19-04-2016 APA12_RS13425 090eec164fdce416cdae9426b9e7da9d 198 Gene3D G3DSA:3.30.230.40 4 92 2.5E-37 T 19-04-2016 APA12_RS13425 090eec164fdce416cdae9426b9e7da9d 198 SUPERFAMILY SSF54211 5 89 4.93E-33 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APA12_RS13425 090eec164fdce416cdae9426b9e7da9d 198 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 34 177 1.4E-65 T 19-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 APA12_RS13425 090eec164fdce416cdae9426b9e7da9d 198 SUPERFAMILY SSF54211 90 182 1.13E-34 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APA12_RS13425 090eec164fdce416cdae9426b9e7da9d 198 PANTHER PTHR23133 1 198 2.5E-107 T 19-04-2016 APA12_RS13425 090eec164fdce416cdae9426b9e7da9d 198 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 64 77 - T 19-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 APA12_RS13120 1870f0626c765b45fe0a609eb403bdff 715 SUPERFAMILY SSF53383 190 473 9.13E-10 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APA12_RS13120 1870f0626c765b45fe0a609eb403bdff 715 Gene3D G3DSA:3.40.640.10 252 486 7.9E-9 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APA12_RS13375 33c69bc443b8677aff569dd6d0d27fbb 213 Gene3D G3DSA:1.10.357.10 9 126 2.6E-8 T 19-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APA12_RS13375 33c69bc443b8677aff569dd6d0d27fbb 213 Gene3D G3DSA:1.10.357.10 165 184 2.6E-8 T 19-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APA12_RS04230 5ad6aa4baf9fd587071e1252c7bea82b 372 Gene3D G3DSA:3.30.460.10 82 191 2.7E-21 T 19-04-2016 APA12_RS04230 5ad6aa4baf9fd587071e1252c7bea82b 372 PANTHER PTHR21262 91 198 9.7E-14 T 19-04-2016 APA12_RS04230 5ad6aa4baf9fd587071e1252c7bea82b 372 PANTHER PTHR21262:SF11 91 198 9.7E-14 T 19-04-2016 APA12_RS04230 5ad6aa4baf9fd587071e1252c7bea82b 372 Pfam PF04607 Region found in RelA / SpoT proteins 91 202 1.8E-18 T 19-04-2016 IPR007685 RelA/SpoT GO:0015969 APA12_RS04230 5ad6aa4baf9fd587071e1252c7bea82b 372 SMART SM00954 91 211 1.1E-18 T 19-04-2016 IPR007685 RelA/SpoT GO:0015969 APA12_RS04230 5ad6aa4baf9fd587071e1252c7bea82b 372 SUPERFAMILY SSF81301 54 203 1.8E-24 T 19-04-2016 APA12_RS03845 dbc538e7dc6b1fcc14af4ad047c8f290 732 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 276 470 7.3E-19 T 19-04-2016 IPR004477 ComEC/Rec2-related protein APA12_RS03845 dbc538e7dc6b1fcc14af4ad047c8f290 732 PANTHER PTHR30619:SF2 20 561 8.7E-52 T 19-04-2016 APA12_RS03845 dbc538e7dc6b1fcc14af4ad047c8f290 732 Pfam PF13567 Domain of unknown function (DUF4131) 47 191 2.2E-6 T 19-04-2016 IPR025405 Domain of unknown function DUF4131 APA12_RS03845 dbc538e7dc6b1fcc14af4ad047c8f290 732 PANTHER PTHR30619 20 561 8.7E-52 T 19-04-2016 APA12_RS03845 dbc538e7dc6b1fcc14af4ad047c8f290 732 Pfam PF03772 Competence protein 256 538 6.8E-57 T 19-04-2016 IPR004477 ComEC/Rec2-related protein APA12_RS05435 1a9097f9a847e7fda7f61f3d22f177fe 168 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 128 138 - T 19-04-2016 IPR020549 Endoribonuclease YbeY, conserved site APA12_RS05435 1a9097f9a847e7fda7f61f3d22f177fe 168 SUPERFAMILY SSF55486 44 166 9.03E-35 T 19-04-2016 APA12_RS05435 1a9097f9a847e7fda7f61f3d22f177fe 168 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 62 158 2.6E-25 T 19-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 APA12_RS05435 1a9097f9a847e7fda7f61f3d22f177fe 168 Pfam PF02130 Uncharacterized protein family UPF0054 61 158 3.3E-27 T 19-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 APA12_RS05435 1a9097f9a847e7fda7f61f3d22f177fe 168 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 24 162 19.71 T 19-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 APA12_RS05435 1a9097f9a847e7fda7f61f3d22f177fe 168 Gene3D G3DSA:3.40.390.30 42 166 3.2E-35 T 19-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 APA12_RS05435 1a9097f9a847e7fda7f61f3d22f177fe 168 PANTHER PTHR22881 61 164 2.2E-28 T 19-04-2016 APA12_RS13355 8a9f67c9c63ae920492b23f7cfe6c6a5 304 PANTHER PTHR24078:SF190 119 284 3.9E-72 T 19-04-2016 APA12_RS13355 8a9f67c9c63ae920492b23f7cfe6c6a5 304 PANTHER PTHR24078:SF190 1 90 3.9E-72 T 19-04-2016 APA12_RS13355 8a9f67c9c63ae920492b23f7cfe6c6a5 304 PANTHER PTHR24078 119 284 3.9E-72 T 19-04-2016 APA12_RS13355 8a9f67c9c63ae920492b23f7cfe6c6a5 304 PANTHER PTHR24078 1 90 3.9E-72 T 19-04-2016 APA12_RS13355 8a9f67c9c63ae920492b23f7cfe6c6a5 304 SMART SM00271 4 62 9.4E-30 T 19-04-2016 IPR001623 DnaJ domain APA12_RS13355 8a9f67c9c63ae920492b23f7cfe6c6a5 304 SUPERFAMILY SSF49493 133 218 9.94E-21 T 19-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 APA12_RS13355 8a9f67c9c63ae920492b23f7cfe6c6a5 304 PRINTS PR00625 DnaJ domain signature 25 40 5.8E-23 T 19-04-2016 IPR001623 DnaJ domain APA12_RS13355 8a9f67c9c63ae920492b23f7cfe6c6a5 304 PRINTS PR00625 DnaJ domain signature 67 86 5.8E-23 T 19-04-2016 IPR001623 DnaJ domain APA12_RS13355 8a9f67c9c63ae920492b23f7cfe6c6a5 304 PRINTS PR00625 DnaJ domain signature 7 25 5.8E-23 T 19-04-2016 IPR001623 DnaJ domain APA12_RS13355 8a9f67c9c63ae920492b23f7cfe6c6a5 304 PRINTS PR00625 DnaJ domain signature 42 62 5.8E-23 T 19-04-2016 IPR001623 DnaJ domain APA12_RS13355 8a9f67c9c63ae920492b23f7cfe6c6a5 304 Pfam PF01556 DnaJ C terminal domain 142 284 8.3E-33 T 19-04-2016 IPR002939 Chaperone DnaJ, C-terminal APA12_RS13355 8a9f67c9c63ae920492b23f7cfe6c6a5 304 Gene3D G3DSA:1.10.287.110 2 94 1.1E-29 T 19-04-2016 IPR001623 DnaJ domain APA12_RS13355 8a9f67c9c63ae920492b23f7cfe6c6a5 304 Gene3D G3DSA:2.60.260.20 134 207 9.5E-20 T 19-04-2016 APA12_RS13355 8a9f67c9c63ae920492b23f7cfe6c6a5 304 Gene3D G3DSA:2.60.260.20 209 284 2.0E-17 T 19-04-2016 APA12_RS13355 8a9f67c9c63ae920492b23f7cfe6c6a5 304 SUPERFAMILY SSF46565 1 106 6.15E-32 T 19-04-2016 IPR001623 DnaJ domain APA12_RS13355 8a9f67c9c63ae920492b23f7cfe6c6a5 304 Pfam PF00226 DnaJ domain 5 67 1.3E-25 T 19-04-2016 IPR001623 DnaJ domain APA12_RS13355 8a9f67c9c63ae920492b23f7cfe6c6a5 304 SUPERFAMILY SSF49493 211 286 2.35E-17 T 19-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 APA12_RS13355 8a9f67c9c63ae920492b23f7cfe6c6a5 304 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 19-04-2016 IPR018253 DnaJ domain, conserved site APA12_RS01310 268dc88317754479a861d71fea38db78 304 Gene3D G3DSA:3.20.20.70 18 301 1.6E-80 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS01310 268dc88317754479a861d71fea38db78 304 PIRSF PIRSF038992 20 302 5.2E-60 T 19-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 APA12_RS01310 268dc88317754479a861d71fea38db78 304 Pfam PF01791 DeoC/LacD family aldolase 41 286 2.2E-31 T 19-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 APA12_RS01310 268dc88317754479a861d71fea38db78 304 SUPERFAMILY SSF51569 20 301 8.79E-64 T 19-04-2016 APA12_RS01310 268dc88317754479a861d71fea38db78 304 SMART SM01133 40 286 5.7E-46 T 19-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 APA12_RS03455 409fc81b3614495ba1e938c45476e214 217 PANTHER PTHR12124 15 196 1.5E-80 T 19-04-2016 APA12_RS03455 409fc81b3614495ba1e938c45476e214 217 SMART SM00474 8 181 4.4E-41 T 19-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 APA12_RS03455 409fc81b3614495ba1e938c45476e214 217 Gene3D G3DSA:3.30.420.10 24 188 4.4E-27 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS03455 409fc81b3614495ba1e938c45476e214 217 PANTHER PTHR12124:SF48 15 196 1.5E-80 T 19-04-2016 APA12_RS03455 409fc81b3614495ba1e938c45476e214 217 SUPERFAMILY SSF53098 25 203 2.95E-54 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS03455 409fc81b3614495ba1e938c45476e214 217 Pfam PF01612 3'-5' exonuclease 26 180 2.6E-38 T 19-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 APA12_RS09885 eb0adac37952c909f711d26d505ed1e5 266 PANTHER PTHR11825:SF55 3 237 1.4E-47 T 19-04-2016 APA12_RS09885 eb0adac37952c909f711d26d505ed1e5 266 Pfam PF01063 Amino-transferase class IV 30 238 5.6E-45 T 19-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 APA12_RS09885 eb0adac37952c909f711d26d505ed1e5 266 Gene3D G3DSA:3.20.10.10 121 252 2.9E-31 T 19-04-2016 APA12_RS09885 eb0adac37952c909f711d26d505ed1e5 266 PANTHER PTHR11825 3 237 1.4E-47 T 19-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 APA12_RS09885 eb0adac37952c909f711d26d505ed1e5 266 SUPERFAMILY SSF56752 3 252 5.23E-63 T 19-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 APA12_RS09885 eb0adac37952c909f711d26d505ed1e5 266 Gene3D G3DSA:3.30.470.10 3 113 2.2E-32 T 19-04-2016 APA12_RS11975 f94aeedc3243aaad4be05949466351af 226 PIRSF PIRSF000239 21 223 1.1E-69 T 19-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 APA12_RS11975 f94aeedc3243aaad4be05949466351af 226 Gene3D G3DSA:3.30.1020.10 179 223 3.0E-11 T 19-04-2016 APA12_RS11975 f94aeedc3243aaad4be05949466351af 226 Gene3D G3DSA:3.40.30.10 26 178 7.5E-55 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS11975 f94aeedc3243aaad4be05949466351af 226 Pfam PF00578 AhpC/TSA family 27 156 1.0E-33 T 19-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 APA12_RS11975 f94aeedc3243aaad4be05949466351af 226 SUPERFAMILY SSF52833 23 201 2.48E-60 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS11975 f94aeedc3243aaad4be05949466351af 226 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 177 209 4.8E-6 T 19-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APA12_RS11975 f94aeedc3243aaad4be05949466351af 226 PANTHER PTHR10681 6 208 2.7E-63 T 19-04-2016 APA12_RS01455 2daca9525520dc5bb60ab280d861ffa2 198 Hamap MF_01151 Protein GrpE [grpE]. 3 196 16.592 T 19-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APA12_RS01455 2daca9525520dc5bb60ab280d861ffa2 198 PRINTS PR00773 GrpE protein signature 148 163 4.4E-16 T 19-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APA12_RS01455 2daca9525520dc5bb60ab280d861ffa2 198 PRINTS PR00773 GrpE protein signature 89 104 4.4E-16 T 19-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APA12_RS01455 2daca9525520dc5bb60ab280d861ffa2 198 PRINTS PR00773 GrpE protein signature 175 194 4.4E-16 T 19-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APA12_RS01455 2daca9525520dc5bb60ab280d861ffa2 198 PRINTS PR00773 GrpE protein signature 61 77 4.4E-16 T 19-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APA12_RS01455 2daca9525520dc5bb60ab280d861ffa2 198 PANTHER PTHR21237 43 198 1.2E-50 T 19-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APA12_RS01455 2daca9525520dc5bb60ab280d861ffa2 198 SUPERFAMILY SSF51064 142 196 3.4E-14 T 19-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 APA12_RS01455 2daca9525520dc5bb60ab280d861ffa2 198 Gene3D G3DSA:3.90.20.20 42 139 6.0E-25 T 19-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil APA12_RS01455 2daca9525520dc5bb60ab280d861ffa2 198 Pfam PF01025 GrpE 31 196 2.0E-44 T 19-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APA12_RS01455 2daca9525520dc5bb60ab280d861ffa2 198 Gene3D G3DSA:2.30.22.10 140 197 7.2E-21 T 19-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 APA12_RS01455 2daca9525520dc5bb60ab280d861ffa2 198 SUPERFAMILY SSF58014 43 140 2.35E-21 T 19-04-2016 APA12_RS01850 7e72ec5a871dd606656555d0e78e6d0c 337 Pfam PF08904 Domain of unknown function (DUF1849) 90 322 1.8E-70 T 19-04-2016 IPR015000 Protein of unknown function DUF1849 APA12_RS06440 7c2476e54cb8637e8d84023bf8dc8386 337 PANTHER PTHR31528 1 328 2.0E-53 T 19-04-2016 IPR027939 NMT1/THI5 family GO:0009228 UniPathway: UPA00060 APA12_RS06440 7c2476e54cb8637e8d84023bf8dc8386 337 SUPERFAMILY SSF53850 42 252 2.56E-19 T 19-04-2016 APA12_RS06440 7c2476e54cb8637e8d84023bf8dc8386 337 Pfam PF09084 NMT1/THI5 like 50 252 1.2E-28 T 19-04-2016 IPR015168 SsuA/THI5-like APA12_RS04760 6e361ca0f063910f3efb87c022a6d5fe 106 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 98 20.761 T 19-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04760 6e361ca0f063910f3efb87c022a6d5fe 106 PANTHER PTHR12903 4 104 4.1E-41 T 19-04-2016 APA12_RS04760 6e361ca0f063910f3efb87c022a6d5fe 106 Gene3D G3DSA:2.30.30.30 4 93 2.6E-25 T 19-04-2016 IPR014722 Ribosomal protein L2 domain 2 APA12_RS04760 6e361ca0f063910f3efb87c022a6d5fe 106 Pfam PF00467 KOW motif 7 37 1.7E-5 T 19-04-2016 IPR005824 KOW APA12_RS04760 6e361ca0f063910f3efb87c022a6d5fe 106 SUPERFAMILY SSF50104 4 102 3.31E-33 T 19-04-2016 IPR008991 Translation protein SH3-like domain APA12_RS04760 6e361ca0f063910f3efb87c022a6d5fe 106 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 19-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04760 6e361ca0f063910f3efb87c022a6d5fe 106 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 104 1.6E-36 T 19-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04760 6e361ca0f063910f3efb87c022a6d5fe 106 SMART SM00739 4 31 1.1E-5 T 19-04-2016 IPR005824 KOW APA12_RS04760 6e361ca0f063910f3efb87c022a6d5fe 106 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 40 104 1.8E-25 T 19-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS09420 784a64b462561fc14629c7c1a0dec3df 212 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 16 196 5.9E-58 T 19-04-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 APA12_RS09420 784a64b462561fc14629c7c1a0dec3df 212 SUPERFAMILY SSF50022 37 188 3.08E-32 T 19-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APA12_RS09420 784a64b462561fc14629c7c1a0dec3df 212 Gene3D G3DSA:2.102.10.10 14 191 3.5E-39 T 19-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APA12_RS09420 784a64b462561fc14629c7c1a0dec3df 212 Pfam PF00355 Rieske [2Fe-2S] domain 62 183 1.6E-10 T 19-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APA12_RS09420 784a64b462561fc14629c7c1a0dec3df 212 PRINTS PR00162 Rieske 2Fe-2S subunit signature 155 167 8.6E-8 T 19-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 APA12_RS09420 784a64b462561fc14629c7c1a0dec3df 212 PRINTS PR00162 Rieske 2Fe-2S subunit signature 168 180 8.6E-8 T 19-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 APA12_RS09420 784a64b462561fc14629c7c1a0dec3df 212 PRINTS PR00162 Rieske 2Fe-2S subunit signature 127 138 8.6E-8 T 19-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 APA12_RS09420 784a64b462561fc14629c7c1a0dec3df 212 PANTHER PTHR10134:SF8 16 200 1.8E-53 T 19-04-2016 APA12_RS09420 784a64b462561fc14629c7c1a0dec3df 212 PANTHER PTHR10134 16 200 1.8E-53 T 19-04-2016 IPR014349 Rieske iron-sulphur protein GO:0016679|GO:0055114 APA12_RS09420 784a64b462561fc14629c7c1a0dec3df 212 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 9 46 5.3E-8 T 19-04-2016 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 APA12_RS00225 616f1cea339e22473fa4865918b8573f 170 SUPERFAMILY SSF55729 10 147 1.45E-23 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase APA12_RS00225 616f1cea339e22473fa4865918b8573f 170 PANTHER PTHR23091 3 147 1.1E-13 T 19-04-2016 APA12_RS00225 616f1cea339e22473fa4865918b8573f 170 Gene3D G3DSA:3.40.630.30 9 149 5.8E-21 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase APA12_RS00225 616f1cea339e22473fa4865918b8573f 170 Pfam PF00583 Acetyltransferase (GNAT) family 54 143 2.3E-11 T 19-04-2016 IPR000182 GNAT domain GO:0008080 APA12_RS03050 69f2161bcbee8809ef00056640f10d95 321 PANTHER PTHR11562:SF55 13 299 3.9E-78 T 19-04-2016 APA12_RS03050 69f2161bcbee8809ef00056640f10d95 321 Pfam PF01545 Cation efflux family 15 208 9.9E-33 T 19-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 APA12_RS03050 69f2161bcbee8809ef00056640f10d95 321 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 13 290 5.0E-62 T 19-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 APA12_RS03050 69f2161bcbee8809ef00056640f10d95 321 SUPERFAMILY SSF160240 211 289 1.44E-21 T 19-04-2016 APA12_RS03050 69f2161bcbee8809ef00056640f10d95 321 Gene3D G3DSA:3.30.70.1350 209 290 5.7E-25 T 19-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain APA12_RS03050 69f2161bcbee8809ef00056640f10d95 321 PANTHER PTHR11562 13 299 3.9E-78 T 19-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 APA12_RS03050 69f2161bcbee8809ef00056640f10d95 321 Gene3D G3DSA:1.20.1510.10 11 208 9.4E-40 T 19-04-2016 IPR027469 Cation efflux protein transmembrane domain APA12_RS03050 69f2161bcbee8809ef00056640f10d95 321 Pfam PF16916 Dimerisation domain of Zinc Transporter 213 289 2.3E-21 T 19-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain APA12_RS03050 69f2161bcbee8809ef00056640f10d95 321 SUPERFAMILY SSF161111 11 210 2.09E-46 T 19-04-2016 APA12_RS08280 5272f611b8083de3d08c168a61bddd85 162 PANTHER PTHR10849:SF20 2 162 8.7E-105 T 19-04-2016 APA12_RS08280 5272f611b8083de3d08c168a61bddd85 162 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 19 140 6.1E-51 T 19-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 APA12_RS08280 5272f611b8083de3d08c168a61bddd85 162 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 10 146 29.281 T 19-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 APA12_RS08280 5272f611b8083de3d08c168a61bddd85 162 Pfam PF12838 4Fe-4S dicluster domain 62 116 1.3E-13 T 19-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APA12_RS08280 5272f611b8083de3d08c168a61bddd85 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 102 113 - T 19-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APA12_RS08280 5272f611b8083de3d08c168a61bddd85 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 63 74 - T 19-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APA12_RS08280 5272f611b8083de3d08c168a61bddd85 162 PANTHER PTHR10849 2 162 8.7E-105 T 19-04-2016 APA12_RS08280 5272f611b8083de3d08c168a61bddd85 162 SUPERFAMILY SSF54862 36 146 7.95E-29 T 19-04-2016 APA12_RS08280 5272f611b8083de3d08c168a61bddd85 162 Gene3D G3DSA:1.10.1060.10 20 138 1.8E-23 T 19-04-2016 APA12_RS03570 73920f6c99a25b0de1f9626c8df6c531 640 PANTHER PTHR24095:SF178 15 639 3.7E-267 T 19-04-2016 APA12_RS03570 73920f6c99a25b0de1f9626c8df6c531 640 Pfam PF00501 AMP-binding enzyme 76 515 1.7E-89 T 19-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APA12_RS03570 73920f6c99a25b0de1f9626c8df6c531 640 Pfam PF13193 AMP-binding enzyme C-terminal domain 524 599 2.5E-20 T 19-04-2016 IPR025110 AMP-binding enzyme C-terminal domain APA12_RS03570 73920f6c99a25b0de1f9626c8df6c531 640 ProSitePatterns PS00455 Putative AMP-binding domain signature. 254 265 - T 19-04-2016 IPR020845 AMP-binding, conserved site APA12_RS03570 73920f6c99a25b0de1f9626c8df6c531 640 Gene3D G3DSA:2.30.38.10 430 508 1.2E-7 T 19-04-2016 APA12_RS03570 73920f6c99a25b0de1f9626c8df6c531 640 PANTHER PTHR24095 15 639 3.7E-267 T 19-04-2016 APA12_RS03570 73920f6c99a25b0de1f9626c8df6c531 640 SUPERFAMILY SSF56801 17 630 3.53E-165 T 19-04-2016 APA12_RS03570 73920f6c99a25b0de1f9626c8df6c531 640 Gene3D G3DSA:3.40.50.980 261 418 1.5E-27 T 19-04-2016 APA12_RS03570 73920f6c99a25b0de1f9626c8df6c531 640 Gene3D G3DSA:3.30.300.30 510 613 1.1E-26 T 19-04-2016 APA12_RS03570 73920f6c99a25b0de1f9626c8df6c531 640 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 15 633 4.6E-256 T 19-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 APA12_RS03570 73920f6c99a25b0de1f9626c8df6c531 640 Gene3D G3DSA:3.40.50.980 72 260 1.0E-39 T 19-04-2016 APA12_RS03570 73920f6c99a25b0de1f9626c8df6c531 640 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 17 73 2.4E-14 T 19-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 APA12_RS07975 6edccb89e48c5cb41cd5a751bd35b2ff 146 Gene3D G3DSA:3.30.530.20 1 144 6.1E-37 T 19-04-2016 IPR023393 START-like domain APA12_RS07975 6edccb89e48c5cb41cd5a751bd35b2ff 146 PANTHER PTHR39332:SF2 1 146 2.9E-39 T 19-04-2016 APA12_RS07975 6edccb89e48c5cb41cd5a751bd35b2ff 146 SUPERFAMILY SSF55961 1 142 6.04E-28 T 19-04-2016 APA12_RS07975 6edccb89e48c5cb41cd5a751bd35b2ff 146 PANTHER PTHR39332 1 146 2.9E-39 T 19-04-2016 APA12_RS07975 6edccb89e48c5cb41cd5a751bd35b2ff 146 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 1 143 5.8E-23 T 19-04-2016 IPR019587 Polyketide cyclase/dehydrase APA12_RS12140 1aad7487602a0f7447f22cd753c10732 227 SUPERFAMILY SSF54427 91 226 4.82E-27 T 19-04-2016 IPR032710 NTF2-like domain APA12_RS12140 1aad7487602a0f7447f22cd753c10732 227 Pfam PF04335 VirB8 protein 21 224 4.5E-64 T 19-04-2016 IPR007430 Bacterial virulence protein VirB8 GO:0016020 APA12_RS11850 246ef02c44fedbb5a9c78b07a1655516 295 Gene3D G3DSA:3.40.50.2300 4 133 4.8E-37 T 19-04-2016 APA12_RS11850 246ef02c44fedbb5a9c78b07a1655516 295 SMART SM00448 9 122 1.3E-34 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS11850 246ef02c44fedbb5a9c78b07a1655516 295 Gene3D G3DSA:1.10.10.10 234 290 1.7E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS11850 246ef02c44fedbb5a9c78b07a1655516 295 PANTHER PTHR26402 9 140 8.4E-50 T 19-04-2016 APA12_RS11850 246ef02c44fedbb5a9c78b07a1655516 295 PANTHER PTHR26402 210 288 8.4E-50 T 19-04-2016 APA12_RS11850 246ef02c44fedbb5a9c78b07a1655516 295 Pfam PF00072 Response regulator receiver domain 11 122 3.5E-26 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS11850 246ef02c44fedbb5a9c78b07a1655516 295 SMART SM00421 231 288 1.7E-15 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APA12_RS11850 246ef02c44fedbb5a9c78b07a1655516 295 SUPERFAMILY SSF52172 8 137 9.53E-38 T 19-04-2016 IPR011006 CheY-like superfamily APA12_RS11850 246ef02c44fedbb5a9c78b07a1655516 295 SUPERFAMILY SSF46894 223 290 6.12E-15 T 19-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APA12_RS11850 246ef02c44fedbb5a9c78b07a1655516 295 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 248 264 3.2E-9 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APA12_RS11850 246ef02c44fedbb5a9c78b07a1655516 295 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 234 248 3.2E-9 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APA12_RS11850 246ef02c44fedbb5a9c78b07a1655516 295 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 264 276 3.2E-9 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APA12_RS11850 246ef02c44fedbb5a9c78b07a1655516 295 Pfam PF00196 Bacterial regulatory proteins, luxR family 234 286 1.5E-12 T 19-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APA12_RS00220 e3e650a8f9d5043c576d0e0e8649be5f 344 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 5 325 3.1E-175 T 19-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APA12_RS00220 e3e650a8f9d5043c576d0e0e8649be5f 344 Pfam PF00154 recA bacterial DNA recombination protein 8 269 7.4E-147 T 19-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APA12_RS00220 e3e650a8f9d5043c576d0e0e8649be5f 344 PANTHER PTHR22942 6 336 4.9E-202 T 19-04-2016 APA12_RS00220 e3e650a8f9d5043c576d0e0e8649be5f 344 ProSitePatterns PS00321 recA signature. 214 222 - T 19-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 APA12_RS00220 e3e650a8f9d5043c576d0e0e8649be5f 344 Hamap MF_00268 Protein RecA [recA]. 6 330 52.593 T 19-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APA12_RS00220 e3e650a8f9d5043c576d0e0e8649be5f 344 Gene3D G3DSA:3.40.50.300 30 268 2.5E-85 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS00220 e3e650a8f9d5043c576d0e0e8649be5f 344 PRINTS PR00142 RecA protein signature 298 315 1.7E-85 T 19-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APA12_RS00220 e3e650a8f9d5043c576d0e0e8649be5f 344 PRINTS PR00142 RecA protein signature 94 123 1.7E-85 T 19-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APA12_RS00220 e3e650a8f9d5043c576d0e0e8649be5f 344 PRINTS PR00142 RecA protein signature 211 239 1.7E-85 T 19-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APA12_RS00220 e3e650a8f9d5043c576d0e0e8649be5f 344 PRINTS PR00142 RecA protein signature 244 273 1.7E-85 T 19-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APA12_RS00220 e3e650a8f9d5043c576d0e0e8649be5f 344 PRINTS PR00142 RecA protein signature 128 157 1.7E-85 T 19-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APA12_RS00220 e3e650a8f9d5043c576d0e0e8649be5f 344 PRINTS PR00142 RecA protein signature 166 195 1.7E-85 T 19-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APA12_RS00220 e3e650a8f9d5043c576d0e0e8649be5f 344 Gene3D G3DSA:3.30.250.10 269 326 1.8E-28 T 19-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal APA12_RS00220 e3e650a8f9d5043c576d0e0e8649be5f 344 SUPERFAMILY SSF54752 269 327 1.44E-22 T 19-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal APA12_RS00220 e3e650a8f9d5043c576d0e0e8649be5f 344 SMART SM00382 58 229 2.9E-11 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS00220 e3e650a8f9d5043c576d0e0e8649be5f 344 PANTHER PTHR22942:SF1 6 336 4.9E-202 T 19-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APA12_RS00220 e3e650a8f9d5043c576d0e0e8649be5f 344 SUPERFAMILY SSF52540 8 268 2.99E-65 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS03705 3af8736bb5fed0dfae7f3a81164527bb 181 Gene3D G3DSA:2.60.120.10 4 180 2.4E-48 T 19-04-2016 IPR014710 RmlC-like jelly roll fold APA12_RS03705 3af8736bb5fed0dfae7f3a81164527bb 181 SUPERFAMILY SSF51182 3 179 8.13E-38 T 19-04-2016 IPR011051 RmlC-like cupin domain APA12_RS03705 3af8736bb5fed0dfae7f3a81164527bb 181 PANTHER PTHR23418 29 177 3.9E-24 T 19-04-2016 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|UniPathway: UPA00904 APA12_RS03705 3af8736bb5fed0dfae7f3a81164527bb 181 Pfam PF03079 ARD/ARD' family 5 165 5.5E-32 T 19-04-2016 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|UniPathway: UPA00904 APA12_RS03705 3af8736bb5fed0dfae7f3a81164527bb 181 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 172 35.012 T 19-04-2016 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.53+1.13.11.54|MetaCyc: PWY-4361|MetaCyc: PWY-5389|UniPathway: UPA00904 APA12_RS13025 b94f900eb2cf603bd4172814351d2cba 258 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 106 120 - T 19-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 APA12_RS13025 b94f900eb2cf603bd4172814351d2cba 258 Pfam PF01479 S4 domain 8 54 1.0E-12 T 19-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APA12_RS13025 b94f900eb2cf603bd4172814351d2cba 258 Gene3D G3DSA:3.10.290.10 7 70 6.6E-21 T 19-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APA12_RS13025 b94f900eb2cf603bd4172814351d2cba 258 Pfam PF00849 RNA pseudouridylate synthase 72 200 2.2E-12 T 19-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APA12_RS13025 b94f900eb2cf603bd4172814351d2cba 258 SUPERFAMILY SSF55120 66 232 3.2E-37 T 19-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APA12_RS13025 b94f900eb2cf603bd4172814351d2cba 258 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 230 1.0E-39 T 19-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 APA12_RS13025 b94f900eb2cf603bd4172814351d2cba 258 PANTHER PTHR21600 4 233 2.8E-72 T 19-04-2016 APA12_RS13025 b94f900eb2cf603bd4172814351d2cba 258 SUPERFAMILY SSF55174 5 69 7.65E-15 T 19-04-2016 APA12_RS13025 b94f900eb2cf603bd4172814351d2cba 258 PANTHER PTHR21600:SF2 4 233 2.8E-72 T 19-04-2016 APA12_RS13025 b94f900eb2cf603bd4172814351d2cba 258 SMART SM00363 8 66 1.8E-12 T 19-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APA12_RS02145 5addbfb9d5b3a1e913c295a74a8fb026 253 Pfam PF00005 ABC transporter 17 164 3.9E-33 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS02145 5addbfb9d5b3a1e913c295a74a8fb026 253 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APA12_RS02145 5addbfb9d5b3a1e913c295a74a8fb026 253 Gene3D G3DSA:3.40.50.300 1 225 2.3E-61 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS02145 5addbfb9d5b3a1e913c295a74a8fb026 253 SUPERFAMILY SSF52540 2 225 1.02E-58 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS02145 5addbfb9d5b3a1e913c295a74a8fb026 253 SMART SM00382 26 212 1.2E-15 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS02145 5addbfb9d5b3a1e913c295a74a8fb026 253 PANTHER PTHR24220 3 240 7.2E-76 T 19-04-2016 APA12_RS04995 bacbb5d0e2da1a6e56faee9a93606f19 151 PANTHER PTHR28055:SF1 1 151 1.2E-34 T 19-04-2016 APA12_RS04995 bacbb5d0e2da1a6e56faee9a93606f19 151 PANTHER PTHR28055 1 151 1.2E-34 T 19-04-2016 APA12_RS04995 bacbb5d0e2da1a6e56faee9a93606f19 151 Pfam PF09424 Yqey-like protein 5 150 3.6E-39 T 19-04-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial APA12_RS04995 bacbb5d0e2da1a6e56faee9a93606f19 151 Gene3D G3DSA:1.10.10.410 97 150 4.3E-15 T 19-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal APA12_RS04995 bacbb5d0e2da1a6e56faee9a93606f19 151 SUPERFAMILY SSF89095 1 150 1.78E-30 T 19-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 APA12_RS04995 bacbb5d0e2da1a6e56faee9a93606f19 151 Gene3D G3DSA:1.10.1510.10 1 94 4.4E-28 T 19-04-2016 APA12_RS00015 3d705b3d8a0b954fe81e9c7282124754 404 Pfam PF13356 Domain of unknown function (DUF4102) 9 90 8.7E-12 T 19-04-2016 IPR025166 Domain of unknown function DUF4102 APA12_RS00015 3d705b3d8a0b954fe81e9c7282124754 404 PANTHER PTHR30629 8 395 2.0E-65 T 19-04-2016 APA12_RS00015 3d705b3d8a0b954fe81e9c7282124754 404 Gene3D G3DSA:1.10.443.10 219 386 1.3E-21 T 19-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APA12_RS00015 3d705b3d8a0b954fe81e9c7282124754 404 SUPERFAMILY SSF56349 101 390 1.82E-50 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APA12_RS00015 3d705b3d8a0b954fe81e9c7282124754 404 Gene3D G3DSA:1.10.150.130 102 194 2.4E-10 T 19-04-2016 IPR023109 Integrase/recombinase, N-terminal APA12_RS00015 3d705b3d8a0b954fe81e9c7282124754 404 PANTHER PTHR30629:SF2 8 395 2.0E-65 T 19-04-2016 APA12_RS00015 3d705b3d8a0b954fe81e9c7282124754 404 Pfam PF00589 Phage integrase family 240 377 3.1E-13 T 19-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APA12_RS06415 19112c7357b9e2150c1fa20ff7617f2e 113 SUPERFAMILY SSF82057 39 112 1.37E-25 T 19-04-2016 APA12_RS06415 19112c7357b9e2150c1fa20ff7617f2e 113 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 2 112 7.0E-42 T 19-04-2016 IPR004624 PhnA protein APA12_RS06415 19112c7357b9e2150c1fa20ff7617f2e 113 PANTHER PTHR30305 1 113 2.7E-66 T 19-04-2016 APA12_RS06415 19112c7357b9e2150c1fa20ff7617f2e 113 Pfam PF08274 PhnA Zinc-Ribbon 2 27 5.0E-14 T 19-04-2016 IPR013987 PhnA protein, N-terminal APA12_RS06415 19112c7357b9e2150c1fa20ff7617f2e 113 Gene3D G3DSA:2.20.25.10 2 35 2.9E-17 T 19-04-2016 APA12_RS06415 19112c7357b9e2150c1fa20ff7617f2e 113 Pfam PF03831 PhnA domain 44 112 1.9E-32 T 19-04-2016 IPR013988 PhnA protein, C-terminal APA12_RS06415 19112c7357b9e2150c1fa20ff7617f2e 113 Gene3D G3DSA:2.30.30.40 43 112 2.7E-34 T 19-04-2016 APA12_RS06415 19112c7357b9e2150c1fa20ff7617f2e 113 SUPERFAMILY SSF57783 2 33 1.62E-11 T 19-04-2016 APA12_RS12650 54f29de63a2fa87747af12867010c974 178 SUPERFAMILY SSF101738 18 132 1.1E-38 T 19-04-2016 IPR007481 Stringent starvation protein B APA12_RS12650 54f29de63a2fa87747af12867010c974 178 Gene3D G3DSA:2.30.30.220 18 133 1.1E-46 T 19-04-2016 IPR007481 Stringent starvation protein B APA12_RS12650 54f29de63a2fa87747af12867010c974 178 Pfam PF04386 Stringent starvation protein B 27 157 1.3E-42 T 19-04-2016 IPR007481 Stringent starvation protein B APA12_RS11740 c9fcbda292a2c8df076c16388b1beefd 332 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 159 3.3E-40 T 19-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 APA12_RS11740 c9fcbda292a2c8df076c16388b1beefd 332 Gene3D G3DSA:3.40.50.720 1 193 7.1E-49 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS11740 c9fcbda292a2c8df076c16388b1beefd 332 PANTHER PTHR11811 1 332 2.4E-148 T 19-04-2016 APA12_RS11740 c9fcbda292a2c8df076c16388b1beefd 332 SMART SM01350 192 327 8.6E-6 T 19-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APA12_RS11740 c9fcbda292a2c8df076c16388b1beefd 332 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 181 209 3.9E-21 T 19-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APA12_RS11740 c9fcbda292a2c8df076c16388b1beefd 332 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 265 292 3.9E-21 T 19-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APA12_RS11740 c9fcbda292a2c8df076c16388b1beefd 332 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 1 24 3.9E-21 T 19-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APA12_RS11740 c9fcbda292a2c8df076c16388b1beefd 332 TIGRFAM TIGR00872 gnd_rel: 6-phosphogluconate dehydrogenase (decarboxylating) 1 331 8.6E-116 T 19-04-2016 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type GO:0055114 APA12_RS11740 c9fcbda292a2c8df076c16388b1beefd 332 PANTHER PTHR11811:SF28 1 332 2.4E-148 T 19-04-2016 APA12_RS11740 c9fcbda292a2c8df076c16388b1beefd 332 Gene3D G3DSA:1.10.1040.10 194 320 3.2E-35 T 19-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APA12_RS11740 c9fcbda292a2c8df076c16388b1beefd 332 SUPERFAMILY SSF51735 1 165 1.07E-44 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS11740 c9fcbda292a2c8df076c16388b1beefd 332 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 192 308 2.2E-21 T 19-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APA12_RS11740 c9fcbda292a2c8df076c16388b1beefd 332 SUPERFAMILY SSF48179 190 314 5.58E-38 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APA12_RS09815 e8aa48179870bcca1506c4649597ede0 369 Pfam PF13579 Glycosyl transferase 4-like domain 19 172 6.0E-11 T 19-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APA12_RS09815 e8aa48179870bcca1506c4649597ede0 369 Gene3D G3DSA:3.40.50.2000 198 333 2.7E-10 T 19-04-2016 APA12_RS09815 e8aa48179870bcca1506c4649597ede0 369 SUPERFAMILY SSF53756 9 361 7.46E-38 T 19-04-2016 APA12_RS09815 e8aa48179870bcca1506c4649597ede0 369 Pfam PF13692 Glycosyl transferases group 1 199 329 6.1E-15 T 19-04-2016 APA12_RS12620 ea4f62daeb9ccc728a2941329e12e36f 211 Gene3D G3DSA:3.40.50.1110 21 208 1.3E-30 T 19-04-2016 IPR013830 SGNH hydrolase-type esterase domain APA12_RS12620 ea4f62daeb9ccc728a2941329e12e36f 211 PANTHER PTHR30383 3 210 3.6E-17 T 19-04-2016 APA12_RS12620 ea4f62daeb9ccc728a2941329e12e36f 211 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 26 196 3.3E-15 T 19-04-2016 IPR013830 SGNH hydrolase-type esterase domain APA12_RS12620 ea4f62daeb9ccc728a2941329e12e36f 211 SUPERFAMILY SSF52266 21 208 2.68E-35 T 19-04-2016 IPR013830 SGNH hydrolase-type esterase domain APA12_RS06430 aafe2538d8a874b77964f21ac7c8d151 291 PIRSF PIRSF016184 1 291 3.2E-73 T 19-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- APA12_RS06430 aafe2538d8a874b77964f21ac7c8d151 291 SUPERFAMILY SSF54506 1 289 9.03E-73 T 19-04-2016 APA12_RS06430 aafe2538d8a874b77964f21ac7c8d151 291 Gene3D G3DSA:3.10.310.10 131 280 2.1E-37 T 19-04-2016 APA12_RS06430 aafe2538d8a874b77964f21ac7c8d151 291 Gene3D G3DSA:3.10.310.10 1 130 1.4E-43 T 19-04-2016 APA12_RS06430 aafe2538d8a874b77964f21ac7c8d151 291 Pfam PF02567 Phenazine biosynthesis-like protein 8 287 2.2E-61 T 19-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- APA12_RS06430 aafe2538d8a874b77964f21ac7c8d151 291 PANTHER PTHR13774 5 290 9.3E-100 T 19-04-2016 APA12_RS06430 aafe2538d8a874b77964f21ac7c8d151 291 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 290 1.6E-62 T 19-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- APA12_RS06430 aafe2538d8a874b77964f21ac7c8d151 291 PANTHER PTHR13774:SF18 5 290 9.3E-100 T 19-04-2016 APA12_RS03465 30b38e03b964698ad235f74abf980114 450 PIRSF PIRSF002744 13 450 9.9E-111 T 19-04-2016 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 APA12_RS03465 30b38e03b964698ad235f74abf980114 450 PANTHER PTHR31806 25 442 3.9E-64 T 19-04-2016 APA12_RS03465 30b38e03b964698ad235f74abf980114 450 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 40 380 2.0E-28 T 19-04-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 APA12_RS06970 acf28c53c3044b9f74e3a2c13cbca972 183 Gene3D G3DSA:1.20.1250.20 24 181 1.6E-32 T 19-04-2016 APA12_RS06970 acf28c53c3044b9f74e3a2c13cbca972 183 Pfam PF07690 Major Facilitator Superfamily 36 181 1.3E-22 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APA12_RS06970 acf28c53c3044b9f74e3a2c13cbca972 183 PANTHER PTHR11662:SF18 19 183 3.2E-59 T 19-04-2016 APA12_RS06970 acf28c53c3044b9f74e3a2c13cbca972 183 SUPERFAMILY SSF103473 21 181 4.45E-31 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS06970 acf28c53c3044b9f74e3a2c13cbca972 183 PANTHER PTHR11662 19 183 3.2E-59 T 19-04-2016 APA12_RS04900 ead1270e8c46872e9ce77d58a7ef717a 222 Gene3D G3DSA:1.25.40.20 97 157 6.2E-5 T 19-04-2016 IPR020683 Ankyrin repeat-containing domain APA12_RS04900 ead1270e8c46872e9ce77d58a7ef717a 222 SUPERFAMILY SSF48403 95 157 7.31E-7 T 19-04-2016 IPR020683 Ankyrin repeat-containing domain APA12_RS06025 8029623072c3e5389e584dca158061cb 402 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 20 397 2.1E-130 T 19-04-2016 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936|UniPathway: UPA00051 APA12_RS06025 8029623072c3e5389e584dca158061cb 402 PANTHER PTHR11808 33 401 2.6E-141 T 19-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APA12_RS06025 8029623072c3e5389e584dca158061cb 402 PIRSF PIRSF001434 1 400 7.3E-113 T 19-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APA12_RS06025 8029623072c3e5389e584dca158061cb 402 SUPERFAMILY SSF53383 41 397 3.09E-86 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APA12_RS06025 8029623072c3e5389e584dca158061cb 402 Gene3D G3DSA:3.40.640.10 27 265 1.1E-70 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APA12_RS06025 8029623072c3e5389e584dca158061cb 402 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 28 396 1.8E-92 T 19-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APA12_RS06025 8029623072c3e5389e584dca158061cb 402 PANTHER PTHR11808:SF45 33 401 2.6E-141 T 19-04-2016 APA12_RS06025 8029623072c3e5389e584dca158061cb 402 Gene3D G3DSA:3.90.1150.10 268 398 1.8E-32 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APA12_RS10520 b2a3e93a4ce518795b73877784f46d9e 333 SMART SM00797 23 306 1.1E-121 T 19-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B APA12_RS10520 b2a3e93a4ce518795b73877784f46d9e 333 PANTHER PTHR18866 175 313 6.6E-25 T 19-04-2016 APA12_RS10520 b2a3e93a4ce518795b73877784f46d9e 333 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 2 313 5.7E-90 T 19-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B APA12_RS10520 b2a3e93a4ce518795b73877784f46d9e 333 PANTHER PTHR18866:SF74 175 313 6.6E-25 T 19-04-2016 APA12_RS10520 b2a3e93a4ce518795b73877784f46d9e 333 SUPERFAMILY SSF50891 182 295 6.07E-8 T 19-04-2016 IPR029000 Cyclophilin-like domain APA12_RS10520 b2a3e93a4ce518795b73877784f46d9e 333 Gene3D G3DSA:2.40.100.10 200 303 3.2E-4 T 19-04-2016 IPR029000 Cyclophilin-like domain APA12_RS10520 b2a3e93a4ce518795b73877784f46d9e 333 Pfam PF02626 Allophanate hydrolase subunit 2 24 289 1.0E-83 T 19-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B APA12_RS13570 36b242b700385cbd0f6ad694b4544aad 210 Gene3D G3DSA:3.90.950.10 17 207 2.4E-43 T 19-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like APA12_RS13570 36b242b700385cbd0f6ad694b4544aad 210 Pfam PF02545 Maf-like protein 17 204 7.3E-36 T 19-04-2016 IPR003697 Maf-like protein GO:0005737 APA12_RS13570 36b242b700385cbd0f6ad694b4544aad 210 PIRSF PIRSF006305 11 209 9.4E-35 T 19-04-2016 IPR003697 Maf-like protein GO:0005737 APA12_RS13570 36b242b700385cbd0f6ad694b4544aad 210 SUPERFAMILY SSF52972 17 204 4.25E-43 T 19-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like APA12_RS13570 36b242b700385cbd0f6ad694b4544aad 210 Hamap MF_00528 Septum formation protein Maf [maf]. 17 209 22.619 T 19-04-2016 IPR003697 Maf-like protein GO:0005737 APA12_RS04880 19e179188eb0abe7d0f2ce9531935b6a 464 PANTHER PTHR23501:SF66 4 451 3.4E-116 T 19-04-2016 APA12_RS04880 19e179188eb0abe7d0f2ce9531935b6a 464 SUPERFAMILY SSF103473 8 199 1.15E-58 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS04880 19e179188eb0abe7d0f2ce9531935b6a 464 SUPERFAMILY SSF103473 245 453 1.15E-58 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS04880 19e179188eb0abe7d0f2ce9531935b6a 464 Gene3D G3DSA:1.20.1250.20 11 186 2.0E-29 T 19-04-2016 APA12_RS04880 19e179188eb0abe7d0f2ce9531935b6a 464 Gene3D G3DSA:1.20.1250.20 258 455 1.6E-15 T 19-04-2016 APA12_RS04880 19e179188eb0abe7d0f2ce9531935b6a 464 PANTHER PTHR23501 4 451 3.4E-116 T 19-04-2016 APA12_RS04880 19e179188eb0abe7d0f2ce9531935b6a 464 PRINTS PR01036 Tetracycline resistance protein TetB signature 199 217 6.5E-11 T 19-04-2016 APA12_RS04880 19e179188eb0abe7d0f2ce9531935b6a 464 PRINTS PR01036 Tetracycline resistance protein TetB signature 13 37 6.5E-11 T 19-04-2016 APA12_RS04880 19e179188eb0abe7d0f2ce9531935b6a 464 PRINTS PR01036 Tetracycline resistance protein TetB signature 134 158 6.5E-11 T 19-04-2016 APA12_RS04880 19e179188eb0abe7d0f2ce9531935b6a 464 PRINTS PR01036 Tetracycline resistance protein TetB signature 396 415 6.5E-11 T 19-04-2016 APA12_RS04880 19e179188eb0abe7d0f2ce9531935b6a 464 PRINTS PR01036 Tetracycline resistance protein TetB signature 334 354 6.5E-11 T 19-04-2016 APA12_RS04880 19e179188eb0abe7d0f2ce9531935b6a 464 PRINTS PR01036 Tetracycline resistance protein TetB signature 104 124 6.5E-11 T 19-04-2016 APA12_RS04880 19e179188eb0abe7d0f2ce9531935b6a 464 Pfam PF07690 Major Facilitator Superfamily 16 404 1.3E-49 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APA12_RS11505 6f89969f07ab40343927639ddfbf8179 171 PANTHER PTHR30411:SF0 15 167 1.5E-41 T 19-04-2016 APA12_RS11505 6f89969f07ab40343927639ddfbf8179 171 PANTHER PTHR30411 15 167 1.5E-41 T 19-04-2016 APA12_RS11505 6f89969f07ab40343927639ddfbf8179 171 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 15 166 2.6E-46 T 19-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC APA12_RS11505 6f89969f07ab40343927639ddfbf8179 171 Pfam PF04073 Aminoacyl-tRNA editing domain 46 155 1.6E-26 T 19-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APA12_RS11505 6f89969f07ab40343927639ddfbf8179 171 PIRSF PIRSF006181 10 169 5.5E-45 T 19-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC APA12_RS11505 6f89969f07ab40343927639ddfbf8179 171 Gene3D G3DSA:3.90.960.10 11 167 7.6E-50 T 19-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APA12_RS11505 6f89969f07ab40343927639ddfbf8179 171 SUPERFAMILY SSF55826 15 166 6.02E-39 T 19-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APA12_RS10225 52683c205459906c259377ec5a677adf 444 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 48 395 4.1E-84 T 19-04-2016 IPR006427 Phage portal protein, HK97 APA12_RS10225 52683c205459906c259377ec5a677adf 444 Pfam PF04860 Phage portal protein 57 389 6.4E-94 T 19-04-2016 IPR006944 Bacteriophage/Gene transfer agent portal protein APA12_RS06875 8810e04ed287b06ebb47a7ad78e9ab58 819 Gene3D G3DSA:2.40.170.20 275 819 5.9E-110 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS06875 8810e04ed287b06ebb47a7ad78e9ab58 819 PANTHER PTHR32552 154 819 4.8E-105 T 19-04-2016 APA12_RS06875 8810e04ed287b06ebb47a7ad78e9ab58 819 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 165 817 8.6E-80 T 19-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 APA12_RS06875 8810e04ed287b06ebb47a7ad78e9ab58 819 Gene3D G3DSA:2.170.130.10 146 268 3.0E-27 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS06875 8810e04ed287b06ebb47a7ad78e9ab58 819 Pfam PF07715 TonB-dependent Receptor Plug Domain 164 260 1.1E-13 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS06875 8810e04ed287b06ebb47a7ad78e9ab58 819 SUPERFAMILY SSF56935 153 819 8.01E-101 T 19-04-2016 APA12_RS06875 8810e04ed287b06ebb47a7ad78e9ab58 819 PANTHER PTHR32552:SF17 154 819 4.8E-105 T 19-04-2016 APA12_RS06875 8810e04ed287b06ebb47a7ad78e9ab58 819 Pfam PF00593 TonB dependent receptor 567 796 7.2E-24 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS06875 8810e04ed287b06ebb47a7ad78e9ab58 819 SMART SM00965 65 116 7.2E-8 T 19-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 APA12_RS10885 a6aec59bde6c0d05419c2e316d0dc5be 933 TIGRFAM TIGR00593 pola: DNA polymerase I 7 933 5.5E-283 T 19-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APA12_RS10885 a6aec59bde6c0d05419c2e316d0dc5be 933 Pfam PF00476 DNA polymerase family A 555 931 5.0E-143 T 19-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APA12_RS10885 a6aec59bde6c0d05419c2e316d0dc5be 933 Gene3D G3DSA:3.30.70.370 668 715 4.3E-66 T 19-04-2016 APA12_RS10885 a6aec59bde6c0d05419c2e316d0dc5be 933 Gene3D G3DSA:3.30.70.370 823 933 4.3E-66 T 19-04-2016 APA12_RS10885 a6aec59bde6c0d05419c2e316d0dc5be 933 Gene3D G3DSA:1.20.1060.10 548 667 1.2E-34 T 19-04-2016 APA12_RS10885 a6aec59bde6c0d05419c2e316d0dc5be 933 SMART SM00474 330 522 4.7E-31 T 19-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 APA12_RS10885 a6aec59bde6c0d05419c2e316d0dc5be 933 SUPERFAMILY SSF53098 327 522 3.33E-45 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS10885 a6aec59bde6c0d05419c2e316d0dc5be 933 SMART SM00279 171 206 2.1E-15 T 19-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 APA12_RS10885 a6aec59bde6c0d05419c2e316d0dc5be 933 SMART SM00482 690 897 1.1E-105 T 19-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APA12_RS10885 a6aec59bde6c0d05419c2e316d0dc5be 933 PANTHER PTHR10133 2 280 0.0 T 19-04-2016 APA12_RS10885 a6aec59bde6c0d05419c2e316d0dc5be 933 PANTHER PTHR10133 316 932 0.0 T 19-04-2016 APA12_RS10885 a6aec59bde6c0d05419c2e316d0dc5be 933 SUPERFAMILY SSF56672 529 933 2.78E-144 T 19-04-2016 APA12_RS10885 a6aec59bde6c0d05419c2e316d0dc5be 933 SUPERFAMILY SSF88723 4 168 1.64E-51 T 19-04-2016 IPR029060 PIN domain-like APA12_RS10885 a6aec59bde6c0d05419c2e316d0dc5be 933 Gene3D G3DSA:3.30.420.10 328 546 7.0E-70 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS10885 a6aec59bde6c0d05419c2e316d0dc5be 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 849 865 8.6E-73 T 19-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APA12_RS10885 a6aec59bde6c0d05419c2e316d0dc5be 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 734 747 8.6E-73 T 19-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APA12_RS10885 a6aec59bde6c0d05419c2e316d0dc5be 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 817 828 8.6E-73 T 19-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APA12_RS10885 a6aec59bde6c0d05419c2e316d0dc5be 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 682 697 8.6E-73 T 19-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APA12_RS10885 a6aec59bde6c0d05419c2e316d0dc5be 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 880 893 8.6E-73 T 19-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APA12_RS10885 a6aec59bde6c0d05419c2e316d0dc5be 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 795 806 8.6E-73 T 19-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APA12_RS10885 a6aec59bde6c0d05419c2e316d0dc5be 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 659 681 8.6E-73 T 19-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APA12_RS10885 a6aec59bde6c0d05419c2e316d0dc5be 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 758 783 8.6E-73 T 19-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APA12_RS10885 a6aec59bde6c0d05419c2e316d0dc5be 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 704 727 8.6E-73 T 19-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APA12_RS10885 a6aec59bde6c0d05419c2e316d0dc5be 933 Gene3D G3DSA:1.10.150.20 716 822 1.2E-31 T 19-04-2016 APA12_RS10885 a6aec59bde6c0d05419c2e316d0dc5be 933 SMART SM00475 5 260 1.2E-117 T 19-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 APA12_RS10885 a6aec59bde6c0d05419c2e316d0dc5be 933 Gene3D G3DSA:3.40.50.1010 6 183 2.1E-67 T 19-04-2016 IPR029060 PIN domain-like APA12_RS10885 a6aec59bde6c0d05419c2e316d0dc5be 933 PANTHER PTHR10133:SF27 2 280 0.0 T 19-04-2016 APA12_RS10885 a6aec59bde6c0d05419c2e316d0dc5be 933 PANTHER PTHR10133:SF27 316 932 0.0 T 19-04-2016 APA12_RS10885 a6aec59bde6c0d05419c2e316d0dc5be 933 ProSitePatterns PS00447 DNA polymerase family A signature. 758 777 - T 19-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APA12_RS10885 a6aec59bde6c0d05419c2e316d0dc5be 933 SUPERFAMILY SSF47807 169 283 5.08E-31 T 19-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 APA12_RS10885 a6aec59bde6c0d05419c2e316d0dc5be 933 Gene3D G3DSA:1.10.150.20 184 244 5.3E-26 T 19-04-2016 APA12_RS10885 a6aec59bde6c0d05419c2e316d0dc5be 933 Pfam PF01612 3'-5' exonuclease 330 521 1.9E-29 T 19-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 APA12_RS10885 a6aec59bde6c0d05419c2e316d0dc5be 933 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 6 168 1.2E-53 T 19-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 APA12_RS10885 a6aec59bde6c0d05419c2e316d0dc5be 933 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 169 263 6.5E-31 T 19-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 APA12_RS10730 d17010a59750cd31e416e4c62869e30b 422 PANTHER PTHR11778 1 421 5.6E-188 T 19-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APA12_RS10730 d17010a59750cd31e416e4c62869e30b 422 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 420 37.848 T 19-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APA12_RS10730 d17010a59750cd31e416e4c62869e30b 422 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 415 2.6E-146 T 19-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APA12_RS10730 d17010a59750cd31e416e4c62869e30b 422 SUPERFAMILY SSF55681 116 419 5.27E-92 T 19-04-2016 APA12_RS10730 d17010a59750cd31e416e4c62869e30b 422 SUPERFAMILY SSF46589 1 112 5.75E-22 T 19-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 APA12_RS10730 d17010a59750cd31e416e4c62869e30b 422 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 222 398 8.8E-29 T 19-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS10730 d17010a59750cd31e416e4c62869e30b 422 PIRSF PIRSF001529 1 422 8.7E-153 T 19-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APA12_RS10730 d17010a59750cd31e416e4c62869e30b 422 Gene3D G3DSA:1.10.287.40 1 104 4.1E-22 T 19-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 APA12_RS10730 d17010a59750cd31e416e4c62869e30b 422 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 105 2.1E-20 T 19-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 APA12_RS10730 d17010a59750cd31e416e4c62869e30b 422 Gene3D G3DSA:3.30.930.10 106 419 2.2E-134 T 19-04-2016 APA12_RS10730 d17010a59750cd31e416e4c62869e30b 422 PRINTS PR00981 Seryl-tRNA synthetase signature 314 327 4.7E-29 T 19-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APA12_RS10730 d17010a59750cd31e416e4c62869e30b 422 PRINTS PR00981 Seryl-tRNA synthetase signature 349 365 4.7E-29 T 19-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APA12_RS10730 d17010a59750cd31e416e4c62869e30b 422 PRINTS PR00981 Seryl-tRNA synthetase signature 262 274 4.7E-29 T 19-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APA12_RS10730 d17010a59750cd31e416e4c62869e30b 422 PRINTS PR00981 Seryl-tRNA synthetase signature 331 347 4.7E-29 T 19-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APA12_RS10730 d17010a59750cd31e416e4c62869e30b 422 PRINTS PR00981 Seryl-tRNA synthetase signature 274 287 4.7E-29 T 19-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APA12_RS07670 4544161650a148efaad4c18cea172f75 829 Pfam PF04185 Phosphoesterase family 365 533 3.5E-41 T 19-04-2016 IPR007312 Phosphoesterase GO:0016788 APA12_RS07670 4544161650a148efaad4c18cea172f75 829 Pfam PF04185 Phosphoesterase family 45 273 9.6E-49 T 19-04-2016 IPR007312 Phosphoesterase GO:0016788 APA12_RS07670 4544161650a148efaad4c18cea172f75 829 PANTHER PTHR31956 1 287 8.3E-102 T 19-04-2016 APA12_RS07670 4544161650a148efaad4c18cea172f75 829 PANTHER PTHR31956 379 589 8.3E-102 T 19-04-2016 APA12_RS07670 4544161650a148efaad4c18cea172f75 829 TIGRFAM TIGR03396 PC_PLC: phospholipase C, phosphocholine-specific 3 826 2.4E-237 T 19-04-2016 IPR017767 Bacterial phospholipase C, phosphocholine-specific GO:0034480 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 APA12_RS07670 4544161650a148efaad4c18cea172f75 829 PANTHER PTHR31956:SF6 1 287 8.3E-102 T 19-04-2016 APA12_RS07670 4544161650a148efaad4c18cea172f75 829 PANTHER PTHR31956:SF6 379 589 8.3E-102 T 19-04-2016 APA12_RS07670 4544161650a148efaad4c18cea172f75 829 Pfam PF05506 Domain of unknown function (DUF756) 627 725 4.8E-14 T 19-04-2016 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 APA12_RS06620 3d272e15c8e69a446c965d5fb17d012d 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 1.6E-5 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APA12_RS06620 3d272e15c8e69a446c965d5fb17d012d 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 1.6E-5 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APA12_RS06620 3d272e15c8e69a446c965d5fb17d012d 184 PANTHER PTHR30055 3 143 1.4E-15 T 19-04-2016 APA12_RS06620 3d272e15c8e69a446c965d5fb17d012d 184 PANTHER PTHR30055:SF71 3 143 1.4E-15 T 19-04-2016 APA12_RS06620 3d272e15c8e69a446c965d5fb17d012d 184 SUPERFAMILY SSF46689 1 69 4.1E-14 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS06620 3d272e15c8e69a446c965d5fb17d012d 184 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 3.6E-9 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APA12_RS06620 3d272e15c8e69a446c965d5fb17d012d 184 Gene3D G3DSA:1.10.357.10 6 179 1.5E-26 T 19-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APA12_RS07370 794a678805706ee3be7ada16ba2cf28e 482 PRINTS PR00145 Argininosuccinate lyase family signature 190 210 7.1E-7 T 19-04-2016 APA12_RS07370 794a678805706ee3be7ada16ba2cf28e 482 PRINTS PR00145 Argininosuccinate lyase family signature 332 348 7.1E-7 T 19-04-2016 APA12_RS07370 794a678805706ee3be7ada16ba2cf28e 482 PRINTS PR00145 Argininosuccinate lyase family signature 148 170 7.1E-7 T 19-04-2016 APA12_RS07370 794a678805706ee3be7ada16ba2cf28e 482 Gene3D G3DSA:1.20.200.10 154 417 2.1E-94 T 19-04-2016 APA12_RS07370 794a678805706ee3be7ada16ba2cf28e 482 Pfam PF10415 Fumarase C C-terminus 423 476 6.7E-20 T 19-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 APA12_RS07370 794a678805706ee3be7ada16ba2cf28e 482 ProSitePatterns PS00163 Fumarate lyases signature. 332 341 - T 19-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 APA12_RS07370 794a678805706ee3be7ada16ba2cf28e 482 Gene3D G3DSA:1.10.40.30 420 478 4.9E-24 T 19-04-2016 APA12_RS07370 794a678805706ee3be7ada16ba2cf28e 482 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 19 476 7.2E-210 T 19-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 APA12_RS07370 794a678805706ee3be7ada16ba2cf28e 482 PRINTS PR00149 Fumarate lyase superfamily signature 332 348 2.6E-30 T 19-04-2016 IPR000362 Fumarate lyase family APA12_RS07370 794a678805706ee3be7ada16ba2cf28e 482 PRINTS PR00149 Fumarate lyase superfamily signature 195 213 2.6E-30 T 19-04-2016 IPR000362 Fumarate lyase family APA12_RS07370 794a678805706ee3be7ada16ba2cf28e 482 PRINTS PR00149 Fumarate lyase superfamily signature 286 313 2.6E-30 T 19-04-2016 IPR000362 Fumarate lyase family APA12_RS07370 794a678805706ee3be7ada16ba2cf28e 482 PRINTS PR00149 Fumarate lyase superfamily signature 149 167 2.6E-30 T 19-04-2016 IPR000362 Fumarate lyase family APA12_RS07370 794a678805706ee3be7ada16ba2cf28e 482 PANTHER PTHR11444 7 477 1.8E-222 T 19-04-2016 IPR000362 Fumarate lyase family APA12_RS07370 794a678805706ee3be7ada16ba2cf28e 482 PANTHER PTHR11444:SF1 7 477 1.8E-222 T 19-04-2016 APA12_RS07370 794a678805706ee3be7ada16ba2cf28e 482 Gene3D G3DSA:1.10.275.10 19 153 5.3E-58 T 19-04-2016 IPR024083 Fumarase/histidase, N-terminal APA12_RS07370 794a678805706ee3be7ada16ba2cf28e 482 Hamap MF_00743 Fumarate hydratase class II [fumC]. 19 477 82.236 T 19-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 APA12_RS07370 794a678805706ee3be7ada16ba2cf28e 482 SUPERFAMILY SSF48557 20 476 3.46E-145 T 19-04-2016 IPR008948 L-Aspartase-like GO:0003824 APA12_RS07370 794a678805706ee3be7ada16ba2cf28e 482 Pfam PF00206 Lyase 27 357 1.0E-103 T 19-04-2016 IPR022761 Fumarate lyase, N-terminal APA12_RS04715 247c557a857973bb45f9c4cb6728df5b 111 Gene3D G3DSA:3.30.70.330 18 109 1.5E-35 T 19-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 APA12_RS04715 247c557a857973bb45f9c4cb6728df5b 111 Pfam PF00276 Ribosomal protein L23 21 106 6.3E-32 T 19-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 APA12_RS04715 247c557a857973bb45f9c4cb6728df5b 111 PANTHER PTHR11620 20 110 5.2E-31 T 19-04-2016 APA12_RS04715 247c557a857973bb45f9c4cb6728df5b 111 SUPERFAMILY SSF54189 18 108 5.76E-33 T 19-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04715 247c557a857973bb45f9c4cb6728df5b 111 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 20 109 22.266 T 19-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 APA12_RS15365 71d21afc37250d21588b109a77589449 496 SUPERFAMILY SSF52172 409 493 7.83E-22 T 19-04-2016 IPR011006 CheY-like superfamily APA12_RS15365 71d21afc37250d21588b109a77589449 496 PRINTS PR00344 Bacterial sensor protein C-terminal signature 331 341 5.1E-12 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS15365 71d21afc37250d21588b109a77589449 496 PRINTS PR00344 Bacterial sensor protein C-terminal signature 348 366 5.1E-12 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS15365 71d21afc37250d21588b109a77589449 496 PRINTS PR00344 Bacterial sensor protein C-terminal signature 313 327 5.1E-12 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS15365 71d21afc37250d21588b109a77589449 496 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 385 5.1E-12 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS15365 71d21afc37250d21588b109a77589449 496 SUPERFAMILY SSF55874 220 385 2.75E-41 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS15365 71d21afc37250d21588b109a77589449 496 Gene3D G3DSA:3.40.50.2300 406 494 5.7E-21 T 19-04-2016 APA12_RS15365 71d21afc37250d21588b109a77589449 496 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 277 386 1.3E-24 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS15365 71d21afc37250d21588b109a77589449 496 Gene3D G3DSA:3.30.565.10 216 391 6.0E-42 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS15365 71d21afc37250d21588b109a77589449 496 Gene3D G3DSA:1.10.287.130 156 215 1.5E-16 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS15365 71d21afc37250d21588b109a77589449 496 SMART SM00388 164 230 1.1E-15 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS15365 71d21afc37250d21588b109a77589449 496 Pfam PF00512 His Kinase A (phospho-acceptor) domain 164 230 1.5E-16 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS15365 71d21afc37250d21588b109a77589449 496 PANTHER PTHR24423 36 49 6.9E-102 T 19-04-2016 APA12_RS15365 71d21afc37250d21588b109a77589449 496 PANTHER PTHR24423 143 488 6.9E-102 T 19-04-2016 APA12_RS15365 71d21afc37250d21588b109a77589449 496 SUPERFAMILY SSF47384 149 231 6.47E-21 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS15365 71d21afc37250d21588b109a77589449 496 Pfam PF00072 Response regulator receiver domain 412 493 7.2E-16 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS15365 71d21afc37250d21588b109a77589449 496 SMART SM00387 277 388 1.1E-33 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS15365 71d21afc37250d21588b109a77589449 496 SMART SM00448 410 496 2.8E-5 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS07825 876ec95519037c70c0ed360287fc29ea 529 TIGRFAM TIGR03801 asp_4_decarbox: aspartate 4-decarboxylase 11 524 2.7E-232 T 19-04-2016 IPR022518 Aspartate 4-decarboxylase KEGG: 00220+2.6.1.1|KEGG: 00250+4.1.1.12+2.6.1.1|KEGG: 00270+4.1.1.12+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 APA12_RS07825 876ec95519037c70c0ed360287fc29ea 529 Gene3D G3DSA:3.90.1150.10 382 521 4.4E-14 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APA12_RS07825 876ec95519037c70c0ed360287fc29ea 529 SUPERFAMILY SSF53383 131 343 3.81E-44 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APA12_RS07825 876ec95519037c70c0ed360287fc29ea 529 SUPERFAMILY SSF53383 377 520 3.81E-44 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APA12_RS07825 876ec95519037c70c0ed360287fc29ea 529 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 310 323 - T 19-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 APA12_RS07825 876ec95519037c70c0ed360287fc29ea 529 PANTHER PTHR11751 462 520 3.5E-123 T 19-04-2016 APA12_RS07825 876ec95519037c70c0ed360287fc29ea 529 PANTHER PTHR11751 375 446 3.5E-123 T 19-04-2016 APA12_RS07825 876ec95519037c70c0ed360287fc29ea 529 PANTHER PTHR11751 77 340 3.5E-123 T 19-04-2016 APA12_RS07825 876ec95519037c70c0ed360287fc29ea 529 Gene3D G3DSA:3.40.640.10 126 340 1.9E-37 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APA12_RS07825 876ec95519037c70c0ed360287fc29ea 529 Pfam PF00155 Aminotransferase class I and II 144 503 4.8E-23 T 19-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APA12_RS07825 876ec95519037c70c0ed360287fc29ea 529 PANTHER PTHR11751:SF6 462 520 3.5E-123 T 19-04-2016 APA12_RS07825 876ec95519037c70c0ed360287fc29ea 529 PANTHER PTHR11751:SF6 375 446 3.5E-123 T 19-04-2016 APA12_RS07825 876ec95519037c70c0ed360287fc29ea 529 PANTHER PTHR11751:SF6 77 340 3.5E-123 T 19-04-2016 APA12_RS12780 62be027e45c15fa5be33cbe9a53c4890 157 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 103 117 4.9E-8 T 19-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 APA12_RS12780 62be027e45c15fa5be33cbe9a53c4890 157 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 86 99 4.9E-8 T 19-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 APA12_RS12780 62be027e45c15fa5be33cbe9a53c4890 157 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 118 131 4.9E-8 T 19-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 APA12_RS12780 62be027e45c15fa5be33cbe9a53c4890 157 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 7 157 2.4E-34 T 19-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 APA12_RS12780 62be027e45c15fa5be33cbe9a53c4890 157 SUPERFAMILY SSF51230 82 157 2.49E-21 T 19-04-2016 IPR011053 Single hybrid motif APA12_RS12780 62be027e45c15fa5be33cbe9a53c4890 157 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 113 130 - T 19-04-2016 IPR001882 Biotin-binding site APA12_RS12780 62be027e45c15fa5be33cbe9a53c4890 157 PANTHER PTHR23151 4 157 9.0E-27 T 19-04-2016 APA12_RS12780 62be027e45c15fa5be33cbe9a53c4890 157 Gene3D G3DSA:2.40.50.100 81 157 3.5E-26 T 19-04-2016 APA12_RS12780 62be027e45c15fa5be33cbe9a53c4890 157 Pfam PF00364 Biotin-requiring enzyme 84 156 9.5E-17 T 19-04-2016 IPR000089 Biotin/lipoyl attachment APA12_RS11110 4fb565420454db2e21859707c6444df1 404 SUPERFAMILY SSF52343 260 395 5.37E-27 T 19-04-2016 APA12_RS11110 4fb565420454db2e21859707c6444df1 404 Gene3D G3DSA:2.40.30.10 153 256 4.6E-34 T 19-04-2016 APA12_RS11110 4fb565420454db2e21859707c6444df1 404 Pfam PF00042 Globin 12 105 1.2E-6 T 19-04-2016 IPR000971 Globin GO:0019825|GO:0020037 APA12_RS11110 4fb565420454db2e21859707c6444df1 404 Gene3D G3DSA:1.10.490.10 6 144 4.2E-47 T 19-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 APA12_RS11110 4fb565420454db2e21859707c6444df1 404 PANTHER PTHR22924:SF49 5 394 1.8E-111 T 19-04-2016 APA12_RS11110 4fb565420454db2e21859707c6444df1 404 Gene3D G3DSA:3.40.50.80 260 396 1.4E-26 T 19-04-2016 APA12_RS11110 4fb565420454db2e21859707c6444df1 404 Pfam PF00175 Oxidoreductase NAD-binding domain 267 374 4.3E-9 T 19-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 APA12_RS11110 4fb565420454db2e21859707c6444df1 404 SUPERFAMILY SSF63380 152 255 1.07E-28 T 19-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APA12_RS11110 4fb565420454db2e21859707c6444df1 404 Pfam PF00970 Oxidoreductase FAD-binding domain 159 255 4.6E-11 T 19-04-2016 IPR008333 Oxidoreductase, FAD-binding domain APA12_RS11110 4fb565420454db2e21859707c6444df1 404 PANTHER PTHR22924 5 394 1.8E-111 T 19-04-2016 APA12_RS11110 4fb565420454db2e21859707c6444df1 404 SUPERFAMILY SSF46458 5 146 3.66E-37 T 19-04-2016 IPR009050 Globin-like APA12_RS09805 36417cc653899b3e43caa6c215ec13cb 343 Pfam PF06258 Mitochondrial fission ELM1 34 341 8.2E-80 T 19-04-2016 IPR009367 Mitochondrial fission protein ELM1-like APA12_RS09805 36417cc653899b3e43caa6c215ec13cb 343 PANTHER PTHR33986 118 283 2.6E-37 T 19-04-2016 APA12_RS09805 36417cc653899b3e43caa6c215ec13cb 343 PANTHER PTHR33986:SF2 118 283 2.6E-37 T 19-04-2016 APA12_RS11135 5048aa1e23b4d0e09d83475d0dd26de8 467 Gene3D G3DSA:3.40.50.720 10 123 7.9E-30 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS11135 5048aa1e23b4d0e09d83475d0dd26de8 467 Pfam PF10414 Sirohaem synthase dimerisation region 162 217 1.6E-16 T 19-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APA12_RS11135 5048aa1e23b4d0e09d83475d0dd26de8 467 Gene3D G3DSA:1.10.8.210 162 218 6.5E-13 T 19-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APA12_RS11135 5048aa1e23b4d0e09d83475d0dd26de8 467 Gene3D G3DSA:3.30.950.10 341 461 1.2E-46 T 19-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 APA12_RS11135 5048aa1e23b4d0e09d83475d0dd26de8 467 Pfam PF14824 Sirohaem biosynthesis protein central 130 155 9.0E-9 T 19-04-2016 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APA12_RS11135 5048aa1e23b4d0e09d83475d0dd26de8 467 PANTHER PTHR21091 174 466 1.8E-80 T 19-04-2016 APA12_RS11135 5048aa1e23b4d0e09d83475d0dd26de8 467 PANTHER PTHR21091:SF16 174 466 1.8E-80 T 19-04-2016 APA12_RS11135 5048aa1e23b4d0e09d83475d0dd26de8 467 Gene3D G3DSA:3.30.160.110 124 159 1.6E-15 T 19-04-2016 APA12_RS11135 5048aa1e23b4d0e09d83475d0dd26de8 467 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 305 338 - T 19-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APA12_RS11135 5048aa1e23b4d0e09d83475d0dd26de8 467 SUPERFAMILY SSF51735 10 123 1.26E-18 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS11135 5048aa1e23b4d0e09d83475d0dd26de8 467 PIRSF PIRSF036426 8 466 4.6E-185 T 19-04-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APA12_RS11135 5048aa1e23b4d0e09d83475d0dd26de8 467 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 225 460 1.6E-91 T 19-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APA12_RS11135 5048aa1e23b4d0e09d83475d0dd26de8 467 SUPERFAMILY SSF75615 125 219 4.84E-25 T 19-04-2016 APA12_RS11135 5048aa1e23b4d0e09d83475d0dd26de8 467 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 11 216 2.3E-54 T 19-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APA12_RS11135 5048aa1e23b4d0e09d83475d0dd26de8 467 Gene3D G3DSA:3.40.1010.10 224 340 4.5E-44 T 19-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 APA12_RS11135 5048aa1e23b4d0e09d83475d0dd26de8 467 Pfam PF13241 Putative NAD(P)-binding 14 126 4.1E-23 T 19-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APA12_RS11135 5048aa1e23b4d0e09d83475d0dd26de8 467 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 227 437 3.2E-51 T 19-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 APA12_RS11135 5048aa1e23b4d0e09d83475d0dd26de8 467 SUPERFAMILY SSF53790 223 461 7.98E-80 T 19-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 APA12_RS05530 f6bcd07eff82a6f6e6634233fff3b809 55 Pfam PF00471 Ribosomal protein L33 7 53 1.9E-17 T 19-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS05530 f6bcd07eff82a6f6e6634233fff3b809 55 PANTHER PTHR15238 1 55 3.0E-21 T 19-04-2016 APA12_RS05530 f6bcd07eff82a6f6e6634233fff3b809 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 1.2E-22 T 19-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS05530 f6bcd07eff82a6f6e6634233fff3b809 55 SUPERFAMILY SSF57829 2 53 5.98E-18 T 19-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 APA12_RS05530 f6bcd07eff82a6f6e6634233fff3b809 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 19-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS05530 f6bcd07eff82a6f6e6634233fff3b809 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 2 53 13.867 T 19-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS09900 020f79b35217b00b38c61d998a7b8145 279 Gene3D G3DSA:3.40.50.620 1 175 1.3E-67 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS09900 020f79b35217b00b38c61d998a7b8145 279 Pfam PF02569 Pantoate-beta-alanine ligase 2 276 1.7E-92 T 19-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 APA12_RS09900 020f79b35217b00b38c61d998a7b8145 279 PANTHER PTHR21299:SF1 1 276 1.6E-109 T 19-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 APA12_RS09900 020f79b35217b00b38c61d998a7b8145 279 PANTHER PTHR21299 1 276 1.6E-109 T 19-04-2016 APA12_RS09900 020f79b35217b00b38c61d998a7b8145 279 SUPERFAMILY SSF52374 1 278 4.76E-96 T 19-04-2016 APA12_RS09900 020f79b35217b00b38c61d998a7b8145 279 Hamap MF_00158 Pantothenate synthetase [panC]. 2 278 36.8 T 19-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 APA12_RS09900 020f79b35217b00b38c61d998a7b8145 279 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 276 5.5E-85 T 19-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 APA12_RS09900 020f79b35217b00b38c61d998a7b8145 279 Gene3D G3DSA:3.30.1300.10 176 278 1.8E-28 T 19-04-2016 APA12_RS05030 83f43bf27cc12599fd52a235908ff632 403 Gene3D G3DSA:3.40.50.150 116 383 7.0E-89 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS05030 83f43bf27cc12599fd52a235908ff632 403 SUPERFAMILY SSF53335 124 385 2.46E-74 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS05030 83f43bf27cc12599fd52a235908ff632 403 Pfam PF02353 Mycolic acid cyclopropane synthetase 116 374 7.1E-88 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS05030 83f43bf27cc12599fd52a235908ff632 403 PANTHER PTHR10108:SF743 52 301 2.1E-113 T 19-04-2016 APA12_RS05030 83f43bf27cc12599fd52a235908ff632 403 PANTHER PTHR10108:SF743 318 399 2.1E-113 T 19-04-2016 APA12_RS05030 83f43bf27cc12599fd52a235908ff632 403 PANTHER PTHR10108 52 301 2.1E-113 T 19-04-2016 APA12_RS05030 83f43bf27cc12599fd52a235908ff632 403 PANTHER PTHR10108 318 399 2.1E-113 T 19-04-2016 APA12_RS05030 83f43bf27cc12599fd52a235908ff632 403 PIRSF PIRSF003085 1 401 4.1E-130 T 19-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 APA12_RS13020 fea42cb87f0f0adf62a59b302c884546 243 PANTHER PTHR11922 26 238 1.1E-43 T 19-04-2016 APA12_RS13020 fea42cb87f0f0adf62a59b302c884546 243 SUPERFAMILY SSF52317 28 239 4.73E-36 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like APA12_RS13020 fea42cb87f0f0adf62a59b302c884546 243 Gene3D G3DSA:3.40.50.880 4 241 1.8E-48 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like APA12_RS13020 fea42cb87f0f0adf62a59b302c884546 243 PANTHER PTHR11922:SF18 26 238 1.1E-43 T 19-04-2016 APA12_RS13020 fea42cb87f0f0adf62a59b302c884546 243 Pfam PF07722 Peptidase C26 6 221 6.5E-59 T 19-04-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 APA12_RS01575 f2b5a763122447d2cb103e42583e63ae 277 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 272 34.837 T 19-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APA12_RS01575 f2b5a763122447d2cb103e42583e63ae 277 Gene3D G3DSA:3.20.20.70 2 271 4.4E-98 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS01575 f2b5a763122447d2cb103e42583e63ae 277 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 253 2.2E-73 T 19-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APA12_RS01575 f2b5a763122447d2cb103e42583e63ae 277 SUPERFAMILY SSF51366 2 255 1.88E-87 T 19-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APA12_RS01575 f2b5a763122447d2cb103e42583e63ae 277 PANTHER PTHR10314:SF4 74 130 1.9E-23 T 19-04-2016 APA12_RS01575 f2b5a763122447d2cb103e42583e63ae 277 PANTHER PTHR10314:SF4 1 51 1.9E-23 T 19-04-2016 APA12_RS01575 f2b5a763122447d2cb103e42583e63ae 277 PANTHER PTHR10314 74 130 1.9E-23 T 19-04-2016 APA12_RS01575 f2b5a763122447d2cb103e42583e63ae 277 PANTHER PTHR10314 1 51 1.9E-23 T 19-04-2016 APA12_RS01575 f2b5a763122447d2cb103e42583e63ae 277 Pfam PF00290 Tryptophan synthase alpha chain 8 254 2.6E-90 T 19-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APA12_RS11485 a5b3e57af79bf6c1195db623c81e9720 187 SUPERFAMILY SSF46785 29 172 1.61E-26 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS11485 a5b3e57af79bf6c1195db623c81e9720 187 PANTHER PTHR33202 13 176 1.1E-44 T 19-04-2016 APA12_RS11485 a5b3e57af79bf6c1195db623c81e9720 187 Gene3D G3DSA:1.10.10.10 28 97 4.9E-12 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS11485 a5b3e57af79bf6c1195db623c81e9720 187 PANTHER PTHR33202:SF6 13 176 1.1E-44 T 19-04-2016 APA12_RS11485 a5b3e57af79bf6c1195db623c81e9720 187 Pfam PF01475 Ferric uptake regulator family 37 166 1.6E-11 T 19-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 APA12_RS03375 2442c5742d7cb992fa6bfdbdf9dac8cd 305 Gene3D G3DSA:3.40.1160.10 34 303 1.1E-102 T 19-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APA12_RS03375 2442c5742d7cb992fa6bfdbdf9dac8cd 305 TIGRFAM TIGR00761 argB: acetylglutamate kinase 36 279 5.2E-76 T 19-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APA12_RS03375 2442c5742d7cb992fa6bfdbdf9dac8cd 305 PIRSF PIRSF000728 14 304 6.0E-105 T 19-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APA12_RS03375 2442c5742d7cb992fa6bfdbdf9dac8cd 305 SUPERFAMILY SSF53633 14 304 7.33E-92 T 19-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APA12_RS03375 2442c5742d7cb992fa6bfdbdf9dac8cd 305 PANTHER PTHR23342 19 303 4.9E-104 T 19-04-2016 APA12_RS03375 2442c5742d7cb992fa6bfdbdf9dac8cd 305 PRINTS PR00474 Glutamate 5-kinase family signature 254 274 1.2E-7 T 19-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APA12_RS03375 2442c5742d7cb992fa6bfdbdf9dac8cd 305 PRINTS PR00474 Glutamate 5-kinase family signature 66 80 1.2E-7 T 19-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APA12_RS03375 2442c5742d7cb992fa6bfdbdf9dac8cd 305 PRINTS PR00474 Glutamate 5-kinase family signature 204 231 1.2E-7 T 19-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APA12_RS03375 2442c5742d7cb992fa6bfdbdf9dac8cd 305 Pfam PF00696 Amino acid kinase family 36 280 1.3E-46 T 19-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APA12_RS03375 2442c5742d7cb992fa6bfdbdf9dac8cd 305 Hamap MF_00082_B Acetylglutamate kinase [argB]. 33 304 36.421 T 19-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APA12_RS02865 6cf4f6e9448e4496ad0d198152b9e142 225 Pfam PF13701 Transposase DDE domain group 1 2 222 3.9E-83 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS02910 6cf4f6e9448e4496ad0d198152b9e142 225 Pfam PF13701 Transposase DDE domain group 1 2 222 3.9E-83 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS05775 8d1bbd917cd1e59a24acae02e50ccd50 406 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 144 161 1.7E-16 T 19-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APA12_RS05775 8d1bbd917cd1e59a24acae02e50ccd50 406 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 171 184 1.7E-16 T 19-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APA12_RS05775 8d1bbd917cd1e59a24acae02e50ccd50 406 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 91 102 1.7E-16 T 19-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APA12_RS05775 8d1bbd917cd1e59a24acae02e50ccd50 406 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 303 392 1.5E-16 T 19-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APA12_RS05775 8d1bbd917cd1e59a24acae02e50ccd50 406 SUPERFAMILY SSF69189 295 391 2.35E-19 T 19-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APA12_RS05775 8d1bbd917cd1e59a24acae02e50ccd50 406 Gene3D G3DSA:2.60.410.10 304 392 2.2E-21 T 19-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APA12_RS05775 8d1bbd917cd1e59a24acae02e50ccd50 406 PANTHER PTHR21581 60 406 2.0E-86 T 19-04-2016 APA12_RS05775 8d1bbd917cd1e59a24acae02e50ccd50 406 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 59 279 2.2E-68 T 19-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 APA12_RS05775 8d1bbd917cd1e59a24acae02e50ccd50 406 Gene3D G3DSA:3.40.710.10 60 303 5.0E-86 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APA12_RS05775 8d1bbd917cd1e59a24acae02e50ccd50 406 SUPERFAMILY SSF56601 8 303 6.05E-74 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APA12_RS05775 8d1bbd917cd1e59a24acae02e50ccd50 406 SMART SM00936 303 393 4.3E-25 T 19-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APA12_RS05775 8d1bbd917cd1e59a24acae02e50ccd50 406 PANTHER PTHR21581:SF3 60 406 2.0E-86 T 19-04-2016 APA12_RS07620 6b5022d35e7bd5d19a732017c033e304 492 SMART SM00116 100 149 5.4E-12 T 19-04-2016 IPR000644 CBS domain APA12_RS07620 6b5022d35e7bd5d19a732017c033e304 492 SMART SM00116 162 210 8.1E-6 T 19-04-2016 IPR000644 CBS domain APA12_RS07620 6b5022d35e7bd5d19a732017c033e304 492 PANTHER PTHR11911 304 491 1.1E-228 T 19-04-2016 APA12_RS07620 6b5022d35e7bd5d19a732017c033e304 492 PANTHER PTHR11911 11 286 1.1E-228 T 19-04-2016 APA12_RS07620 6b5022d35e7bd5d19a732017c033e304 492 Pfam PF00571 CBS domain 97 147 1.0E-10 T 19-04-2016 IPR000644 CBS domain APA12_RS07620 6b5022d35e7bd5d19a732017c033e304 492 Pfam PF00571 CBS domain 154 210 1.4E-6 T 19-04-2016 IPR000644 CBS domain APA12_RS07620 6b5022d35e7bd5d19a732017c033e304 492 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 12 460 1.1E-190 T 19-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 APA12_RS07620 6b5022d35e7bd5d19a732017c033e304 492 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 12 478 1.2E-156 T 19-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 APA12_RS07620 6b5022d35e7bd5d19a732017c033e304 492 Gene3D G3DSA:3.20.20.70 10 490 3.3E-198 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS07620 6b5022d35e7bd5d19a732017c033e304 492 SUPERFAMILY SSF54631 66 210 2.15E-31 T 19-04-2016 APA12_RS07620 6b5022d35e7bd5d19a732017c033e304 492 SMART SM01240 11 478 0.0 T 19-04-2016 APA12_RS07620 6b5022d35e7bd5d19a732017c033e304 492 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 299 311 - T 19-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 APA12_RS07620 6b5022d35e7bd5d19a732017c033e304 492 SUPERFAMILY SSF51412 221 482 1.57E-118 T 19-04-2016 APA12_RS07620 6b5022d35e7bd5d19a732017c033e304 492 SUPERFAMILY SSF51412 9 94 1.57E-118 T 19-04-2016 APA12_RS07620 6b5022d35e7bd5d19a732017c033e304 492 PIRSF PIRSF000130 1 492 1.1E-201 T 19-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 APA12_RS07620 6b5022d35e7bd5d19a732017c033e304 492 PANTHER PTHR11911:SF6 304 491 1.1E-228 T 19-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 APA12_RS07620 6b5022d35e7bd5d19a732017c033e304 492 PANTHER PTHR11911:SF6 11 286 1.1E-228 T 19-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 APA12_RS07620 6b5022d35e7bd5d19a732017c033e304 492 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 12 491 83.413 T 19-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 APA12_RS00275 a7a221fab9f6a3eb4b2e16e1cafdbcf9 274 Gene3D G3DSA:3.40.50.720 22 260 2.1E-56 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS00275 a7a221fab9f6a3eb4b2e16e1cafdbcf9 274 SUPERFAMILY SSF51735 22 261 1.83E-57 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS00275 a7a221fab9f6a3eb4b2e16e1cafdbcf9 274 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 159 187 - T 19-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APA12_RS00275 a7a221fab9f6a3eb4b2e16e1cafdbcf9 274 PANTHER PTHR24322:SF211 172 204 4.2E-44 T 19-04-2016 APA12_RS00275 a7a221fab9f6a3eb4b2e16e1cafdbcf9 274 PANTHER PTHR24322:SF211 26 156 4.2E-44 T 19-04-2016 APA12_RS00275 a7a221fab9f6a3eb4b2e16e1cafdbcf9 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 99 110 3.1E-5 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS00275 a7a221fab9f6a3eb4b2e16e1cafdbcf9 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 160 3.1E-5 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS00275 a7a221fab9f6a3eb4b2e16e1cafdbcf9 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 172 191 3.1E-5 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS00275 a7a221fab9f6a3eb4b2e16e1cafdbcf9 274 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 33 259 2.0E-38 T 19-04-2016 APA12_RS00275 a7a221fab9f6a3eb4b2e16e1cafdbcf9 274 PANTHER PTHR24322 172 204 4.2E-44 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS00275 a7a221fab9f6a3eb4b2e16e1cafdbcf9 274 PANTHER PTHR24322 26 156 4.2E-44 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS00275 a7a221fab9f6a3eb4b2e16e1cafdbcf9 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 224 244 1.7E-21 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS00275 a7a221fab9f6a3eb4b2e16e1cafdbcf9 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 99 110 1.7E-21 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS00275 a7a221fab9f6a3eb4b2e16e1cafdbcf9 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 23 40 1.7E-21 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS00275 a7a221fab9f6a3eb4b2e16e1cafdbcf9 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 210 1.7E-21 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS00275 a7a221fab9f6a3eb4b2e16e1cafdbcf9 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 191 1.7E-21 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS01215 e9074e7dbe20ba30932420bf28a31e43 221 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 110 191 2.5E-7 T 19-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 APA12_RS10430 ad808ec94f1591846aba48ffed3c0a36 326 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 34 326 1.0E-96 T 19-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 APA12_RS10430 ad808ec94f1591846aba48ffed3c0a36 326 PANTHER PTHR30573:SF0 33 326 3.0E-131 T 19-04-2016 APA12_RS10430 ad808ec94f1591846aba48ffed3c0a36 326 Hamap MF_00568 Quinolinate synthase A [nadA]. 30 326 42.865 T 19-04-2016 IPR023066 Quinolinate synthase A, type 2 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 APA12_RS10430 ad808ec94f1591846aba48ffed3c0a36 326 Pfam PF02445 Quinolinate synthetase A protein 35 324 2.2E-112 T 19-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 APA12_RS10430 ad808ec94f1591846aba48ffed3c0a36 326 PANTHER PTHR30573 33 326 3.0E-131 T 19-04-2016 APA12_RS10430 ad808ec94f1591846aba48ffed3c0a36 326 SUPERFAMILY SSF142754 33 325 1.7E-107 T 19-04-2016 APA12_RS06045 b2d1f2a5ac9e68e3207366ef797e2eca 475 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 11 475 9.5E-92 T 19-04-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 APA12_RS06045 b2d1f2a5ac9e68e3207366ef797e2eca 475 PANTHER PTHR21248:SF5 20 475 6.8E-93 T 19-04-2016 APA12_RS06045 b2d1f2a5ac9e68e3207366ef797e2eca 475 Gene3D G3DSA:3.30.870.10 311 443 1.2E-29 T 19-04-2016 APA12_RS06045 b2d1f2a5ac9e68e3207366ef797e2eca 475 PANTHER PTHR21248 20 475 6.8E-93 T 19-04-2016 APA12_RS06045 b2d1f2a5ac9e68e3207366ef797e2eca 475 Pfam PF13091 PLD-like domain 132 244 4.2E-15 T 19-04-2016 IPR025202 Phospholipase D-like domain APA12_RS06045 b2d1f2a5ac9e68e3207366ef797e2eca 475 Pfam PF13091 PLD-like domain 318 438 7.0E-22 T 19-04-2016 IPR025202 Phospholipase D-like domain APA12_RS06045 b2d1f2a5ac9e68e3207366ef797e2eca 475 SUPERFAMILY SSF56024 267 441 6.06E-39 T 19-04-2016 APA12_RS06045 b2d1f2a5ac9e68e3207366ef797e2eca 475 SUPERFAMILY SSF56024 108 307 7.4E-48 T 19-04-2016 APA12_RS06045 b2d1f2a5ac9e68e3207366ef797e2eca 475 SMART SM00155 390 417 4.2E-5 T 19-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 APA12_RS06045 b2d1f2a5ac9e68e3207366ef797e2eca 475 SMART SM00155 214 241 0.022 T 19-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 APA12_RS06045 b2d1f2a5ac9e68e3207366ef797e2eca 475 Pfam PF13396 Phospholipase_D-nuclease N-terminal 21 61 7.0E-7 T 19-04-2016 IPR027379 Cardiolipin synthase N-terminal APA12_RS06045 b2d1f2a5ac9e68e3207366ef797e2eca 475 Gene3D G3DSA:3.30.870.10 109 310 3.7E-46 T 19-04-2016 APA12_RS12505 bb260e2bb40a50229b9d444f72fa4eb0 249 PRINTS PR00123 ATP synthase A subunit signature 230 245 1.3E-26 T 19-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APA12_RS12505 bb260e2bb40a50229b9d444f72fa4eb0 249 PRINTS PR00123 ATP synthase A subunit signature 89 105 1.3E-26 T 19-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APA12_RS12505 bb260e2bb40a50229b9d444f72fa4eb0 249 PRINTS PR00123 ATP synthase A subunit signature 150 165 1.3E-26 T 19-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APA12_RS12505 bb260e2bb40a50229b9d444f72fa4eb0 249 PRINTS PR00123 ATP synthase A subunit signature 170 192 1.3E-26 T 19-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APA12_RS12505 bb260e2bb40a50229b9d444f72fa4eb0 249 SUPERFAMILY SSF81336 82 243 3.4E-45 T 19-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APA12_RS12505 bb260e2bb40a50229b9d444f72fa4eb0 249 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 10 246 7.2E-63 T 19-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APA12_RS12505 bb260e2bb40a50229b9d444f72fa4eb0 249 Gene3D G3DSA:1.20.120.220 82 248 2.6E-48 T 19-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APA12_RS12505 bb260e2bb40a50229b9d444f72fa4eb0 249 PANTHER PTHR11410 10 247 1.5E-78 T 19-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APA12_RS12505 bb260e2bb40a50229b9d444f72fa4eb0 249 ProSitePatterns PS00449 ATP synthase a subunit signature. 173 182 - T 19-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site APA12_RS12505 bb260e2bb40a50229b9d444f72fa4eb0 249 Pfam PF00119 ATP synthase A chain 33 243 2.1E-54 T 19-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APA12_RS12505 bb260e2bb40a50229b9d444f72fa4eb0 249 Hamap MF_01393 ATP synthase subunit a [atpB]. 11 249 15.342 T 19-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APA12_RS07575 36b7442d1f3fce7b0b5ddf26e53d2825 165 PANTHER PTHR10516 46 159 1.6E-28 T 19-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type APA12_RS07575 36b7442d1f3fce7b0b5ddf26e53d2825 165 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 68 156 1.3E-16 T 19-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 APA12_RS07575 36b7442d1f3fce7b0b5ddf26e53d2825 165 Gene3D G3DSA:3.10.50.40 29 162 1.6E-32 T 19-04-2016 APA12_RS07575 36b7442d1f3fce7b0b5ddf26e53d2825 165 SUPERFAMILY SSF54534 16 159 1.24E-32 T 19-04-2016 APA12_RS07575 36b7442d1f3fce7b0b5ddf26e53d2825 165 PANTHER PTHR10516:SF320 46 159 1.6E-28 T 19-04-2016 APA12_RS01220 0c102a075f11cec5e5596202aa740b98 914 SUPERFAMILY SSF63411 742 912 4.83E-30 T 19-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APA12_RS01220 0c102a075f11cec5e5596202aa740b98 914 SUPERFAMILY SSF63411 52 259 3.32E-53 T 19-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APA12_RS01220 0c102a075f11cec5e5596202aa740b98 914 PANTHER PTHR11851 60 873 1.1E-101 T 19-04-2016 APA12_RS01220 0c102a075f11cec5e5596202aa740b98 914 SUPERFAMILY SSF63411 502 704 3.84E-27 T 19-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APA12_RS01220 0c102a075f11cec5e5596202aa740b98 914 SUPERFAMILY SSF63411 278 462 3.83E-20 T 19-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APA12_RS01220 0c102a075f11cec5e5596202aa740b98 914 Gene3D G3DSA:3.30.830.10 511 713 8.0E-23 T 19-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APA12_RS01220 0c102a075f11cec5e5596202aa740b98 914 Gene3D G3DSA:3.30.830.10 59 269 1.5E-54 T 19-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APA12_RS01220 0c102a075f11cec5e5596202aa740b98 914 Pfam PF00675 Insulinase (Peptidase family M16) 74 213 7.0E-19 T 19-04-2016 IPR011765 Peptidase M16, N-terminal APA12_RS01220 0c102a075f11cec5e5596202aa740b98 914 PANTHER PTHR11851:SF136 60 873 1.1E-101 T 19-04-2016 APA12_RS01220 0c102a075f11cec5e5596202aa740b98 914 Gene3D G3DSA:3.30.830.10 730 910 7.4E-22 T 19-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APA12_RS01220 0c102a075f11cec5e5596202aa740b98 914 Gene3D G3DSA:3.30.830.10 366 456 3.5E-11 T 19-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APA12_RS01220 0c102a075f11cec5e5596202aa740b98 914 Pfam PF05193 Peptidase M16 inactive domain 664 844 2.6E-31 T 19-04-2016 IPR007863 Peptidase M16, C-terminal APA12_RS01220 0c102a075f11cec5e5596202aa740b98 914 Pfam PF05193 Peptidase M16 inactive domain 221 391 1.2E-17 T 19-04-2016 IPR007863 Peptidase M16, C-terminal APA12_RS00010 fcfb25b711623a9c3258b68c68813092 141 Gene3D G3DSA:3.30.1330.70 11 141 1.7E-24 T 19-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 APA12_RS00010 fcfb25b711623a9c3258b68c68813092 141 Pfam PF05866 Endodeoxyribonuclease RusA 19 138 6.3E-26 T 19-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 APA12_RS00010 fcfb25b711623a9c3258b68c68813092 141 SUPERFAMILY SSF103084 10 139 1.57E-21 T 19-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 APA12_RS08950 b1588602da9bc0bd7948645876ea150a 405 Pfam PF01385 Probable transposase 164 276 1.9E-20 T 19-04-2016 IPR001959 Probable transposase, IS891/IS1136/IS1341 APA12_RS08950 b1588602da9bc0bd7948645876ea150a 405 Pfam PF07282 Putative transposase DNA-binding domain 305 374 3.1E-14 T 19-04-2016 IPR010095 Transposase IS605, OrfB, C-terminal APA12_RS08950 b1588602da9bc0bd7948645876ea150a 405 PANTHER PTHR30405 1 367 2.7E-68 T 19-04-2016 APA12_RS08950 b1588602da9bc0bd7948645876ea150a 405 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 244 332 5.4E-7 T 19-04-2016 IPR010095 Transposase IS605, OrfB, C-terminal APA12_RS08950 b1588602da9bc0bd7948645876ea150a 405 Pfam PF12323 Helix-turn-helix domain 1 46 1.1E-10 T 19-04-2016 IPR021027 Transposase, putative, helix-turn-helix domain APA12_RS08950 b1588602da9bc0bd7948645876ea150a 405 PANTHER PTHR30405:SF5 1 367 2.7E-68 T 19-04-2016 APA12_RS00365 1c20d74d523676bc79ff8d8a502f2fee 388 Pfam PF01098 Cell cycle protein 30 368 8.0E-94 T 19-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 APA12_RS00365 1c20d74d523676bc79ff8d8a502f2fee 388 PANTHER PTHR30474 4 388 2.6E-127 T 19-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 APA12_RS00365 1c20d74d523676bc79ff8d8a502f2fee 388 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 330 354 - T 19-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 APA12_RS00365 1c20d74d523676bc79ff8d8a502f2fee 388 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 25 372 2.0E-118 T 19-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 APA12_RS00365 1c20d74d523676bc79ff8d8a502f2fee 388 PANTHER PTHR30474:SF1 4 388 2.6E-127 T 19-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 APA12_RS03480 668bba3fe69cb2d9186bed99fa49e347 477 PANTHER PTHR10584:SF159 2 341 2.5E-114 T 19-04-2016 APA12_RS03480 668bba3fe69cb2d9186bed99fa49e347 477 Pfam PF01467 Cytidylyltransferase-like 348 438 6.8E-15 T 19-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APA12_RS03480 668bba3fe69cb2d9186bed99fa49e347 477 Gene3D G3DSA:3.40.50.620 344 463 2.5E-34 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS03480 668bba3fe69cb2d9186bed99fa49e347 477 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 345 410 9.1E-16 T 19-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APA12_RS03480 668bba3fe69cb2d9186bed99fa49e347 477 Gene3D G3DSA:3.40.1190.20 8 315 1.1E-60 T 19-04-2016 IPR029056 Ribokinase-like APA12_RS03480 668bba3fe69cb2d9186bed99fa49e347 477 Pfam PF00294 pfkB family carbohydrate kinase 8 303 4.0E-39 T 19-04-2016 IPR011611 Carbohydrate kinase PfkB APA12_RS03480 668bba3fe69cb2d9186bed99fa49e347 477 SUPERFAMILY SSF53613 7 311 1.71E-52 T 19-04-2016 IPR029056 Ribokinase-like APA12_RS03480 668bba3fe69cb2d9186bed99fa49e347 477 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 3 312 2.3E-114 T 19-04-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 APA12_RS03480 668bba3fe69cb2d9186bed99fa49e347 477 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 334 475 2.7E-58 T 19-04-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 APA12_RS03480 668bba3fe69cb2d9186bed99fa49e347 477 PANTHER PTHR10584 2 341 2.5E-114 T 19-04-2016 APA12_RS03480 668bba3fe69cb2d9186bed99fa49e347 477 SUPERFAMILY SSF52374 344 474 5.35E-23 T 19-04-2016 APA12_RS03480 668bba3fe69cb2d9186bed99fa49e347 477 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 46 69 - T 19-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APA12_RS03480 668bba3fe69cb2d9186bed99fa49e347 477 Hamap MF_01603 Bifunctional protein HldE [hldE]. 1 477 40.961 T 19-04-2016 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 APA12_RS02580 781031a7fe6f18dcf809ed6fdeea0182 408 Pfam PF13403 Hint domain 80 216 8.8E-22 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS08415 64c7950362f684c5570f16ae269a6b4e 427 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 139 410 4.9E-77 T 19-04-2016 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 APA12_RS08415 64c7950362f684c5570f16ae269a6b4e 427 PANTHER PTHR30508:SF0 25 425 7.2E-95 T 19-04-2016 APA12_RS08415 64c7950362f684c5570f16ae269a6b4e 427 PANTHER PTHR30508 25 425 7.2E-95 T 19-04-2016 APA12_RS08415 64c7950362f684c5570f16ae269a6b4e 427 Pfam PF01458 Uncharacterized protein family (UPF0051) 173 395 6.7E-68 T 19-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 APA12_RS08415 64c7950362f684c5570f16ae269a6b4e 427 SUPERFAMILY SSF101960 25 420 1.11E-94 T 19-04-2016 APA12_RS10810 42ea7a745d26a5e37d68b151a2330807 364 SUPERFAMILY SSF102114 6 313 4.45E-73 T 19-04-2016 APA12_RS10810 42ea7a745d26a5e37d68b151a2330807 364 Hamap MF_00660 Coenzyme PQQ synthesis protein E [pqqE]. 1 364 178.108 T 19-04-2016 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 UniPathway: UPA00539 APA12_RS10810 42ea7a745d26a5e37d68b151a2330807 364 TIGRFAM TIGR02109 PQQ_syn_pqqE: coenzyme PQQ biosynthesis enzyme PqqE 5 351 6.0E-169 T 19-04-2016 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 UniPathway: UPA00539 APA12_RS10810 42ea7a745d26a5e37d68b151a2330807 364 Pfam PF13186 Iron-sulfur cluster-binding domain 238 303 7.2E-8 T 19-04-2016 IPR023885 4Fe4S-binding SPASM domain APA12_RS10810 42ea7a745d26a5e37d68b151a2330807 364 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 14 25 - T 19-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 APA12_RS10810 42ea7a745d26a5e37d68b151a2330807 364 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 241 331 2.7E-8 T 19-04-2016 IPR023885 4Fe4S-binding SPASM domain APA12_RS10810 42ea7a745d26a5e37d68b151a2330807 364 SMART SM00729 8 212 0.0073 T 19-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APA12_RS10810 42ea7a745d26a5e37d68b151a2330807 364 Pfam PF04055 Radical SAM superfamily 14 157 2.0E-21 T 19-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APA12_RS10810 42ea7a745d26a5e37d68b151a2330807 364 PIRSF PIRSF037420 1 350 1.4E-117 T 19-04-2016 IPR017200 Coenzyme PQQ synthesis protein E UniPathway: UPA00539 APA12_RS10810 42ea7a745d26a5e37d68b151a2330807 364 Pfam PF13353 4Fe-4S single cluster domain 15 97 2.8E-7 T 19-04-2016 APA12_RS10810 42ea7a745d26a5e37d68b151a2330807 364 PANTHER PTHR11228 6 341 1.2E-108 T 19-04-2016 APA12_RS10810 42ea7a745d26a5e37d68b151a2330807 364 Gene3D G3DSA:3.20.20.70 6 322 2.0E-68 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS10810 42ea7a745d26a5e37d68b151a2330807 364 PANTHER PTHR11228:SF32 6 341 1.2E-108 T 19-04-2016 APA12_RS05455 cda9983047805343255fa78ed6477e1c 642 PANTHER PTHR12815 189 642 3.9E-43 T 19-04-2016 APA12_RS05455 cda9983047805343255fa78ed6477e1c 642 Pfam PF07244 Surface antigen variable number repeat 232 303 2.2E-9 T 19-04-2016 IPR010827 Surface antigen variable number GO:0019867 APA12_RS05455 cda9983047805343255fa78ed6477e1c 642 PANTHER PTHR12815:SF11 189 642 3.9E-43 T 19-04-2016 APA12_RS05455 cda9983047805343255fa78ed6477e1c 642 Gene3D G3DSA:2.40.160.50 321 642 1.3E-21 T 19-04-2016 APA12_RS05455 cda9983047805343255fa78ed6477e1c 642 Pfam PF01103 Surface antigen 331 642 1.1E-34 T 19-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 APA12_RS09640 3b3166ed8fcce5906b6649f9cf0630c6 382 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 6 146 8.1E-25 T 19-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APA12_RS09640 3b3166ed8fcce5906b6649f9cf0630c6 382 SUPERFAMILY SSF53756 5 362 4.12E-95 T 19-04-2016 APA12_RS09640 3b3166ed8fcce5906b6649f9cf0630c6 382 Gene3D G3DSA:3.40.50.2000 2 200 3.9E-49 T 19-04-2016 APA12_RS09640 3b3166ed8fcce5906b6649f9cf0630c6 382 PANTHER PTHR21015 6 361 2.0E-82 T 19-04-2016 APA12_RS09640 3b3166ed8fcce5906b6649f9cf0630c6 382 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 4 358 8.3E-86 T 19-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APA12_RS09640 3b3166ed8fcce5906b6649f9cf0630c6 382 PANTHER PTHR21015:SF22 6 361 2.0E-82 T 19-04-2016 APA12_RS09640 3b3166ed8fcce5906b6649f9cf0630c6 382 Gene3D G3DSA:3.40.50.2000 255 344 1.2E-7 T 19-04-2016 APA12_RS09640 3b3166ed8fcce5906b6649f9cf0630c6 382 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 189 352 5.9E-33 T 19-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APA12_RS09640 3b3166ed8fcce5906b6649f9cf0630c6 382 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 6 363 31.828 T 19-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APA12_RS00620 7ed60d8085e4860ef242ba77bb71a3b5 156 SUPERFAMILY SSF55620 26 142 3.34E-28 T 19-04-2016 APA12_RS00620 7ed60d8085e4860ef242ba77bb71a3b5 156 Pfam PF14489 QueF-like protein 60 138 3.5E-34 T 19-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 APA12_RS00620 7ed60d8085e4860ef242ba77bb71a3b5 156 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 25 135 3.6E-47 T 19-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 APA12_RS00620 7ed60d8085e4860ef242ba77bb71a3b5 156 PANTHER PTHR34354 24 149 1.5E-54 T 19-04-2016 APA12_RS00620 7ed60d8085e4860ef242ba77bb71a3b5 156 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 156 68.817 T 19-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 APA12_RS00620 7ed60d8085e4860ef242ba77bb71a3b5 156 Gene3D G3DSA:3.30.1130.10 14 144 9.6E-48 T 19-04-2016 APA12_RS00620 7ed60d8085e4860ef242ba77bb71a3b5 156 PIRSF PIRSF027377 7 143 6.3E-54 T 19-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 APA12_RS00620 7ed60d8085e4860ef242ba77bb71a3b5 156 PANTHER PTHR34354:SF1 24 149 1.5E-54 T 19-04-2016 APA12_RS12430 c76db2c94509aaa2eb58f78487423a0c 751 SMART SM00382 521 722 1.9E-12 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS12430 c76db2c94509aaa2eb58f78487423a0c 751 PANTHER PTHR24221 161 740 8.8E-162 T 19-04-2016 APA12_RS12430 c76db2c94509aaa2eb58f78487423a0c 751 Gene3D G3DSA:3.40.50.300 494 726 1.8E-72 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS12430 c76db2c94509aaa2eb58f78487423a0c 751 Pfam PF00005 ABC transporter 512 661 7.6E-32 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS12430 c76db2c94509aaa2eb58f78487423a0c 751 ProSitePatterns PS00211 ABC transporters family signature. 633 647 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APA12_RS12430 c76db2c94509aaa2eb58f78487423a0c 751 Gene3D G3DSA:3.90.70.10 32 152 2.6E-10 T 19-04-2016 APA12_RS12430 c76db2c94509aaa2eb58f78487423a0c 751 Gene3D G3DSA:1.20.1560.10 166 477 1.2E-55 T 19-04-2016 APA12_RS12430 c76db2c94509aaa2eb58f78487423a0c 751 SUPERFAMILY SSF90123 166 479 7.72E-51 T 19-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APA12_RS12430 c76db2c94509aaa2eb58f78487423a0c 751 SUPERFAMILY SSF52540 489 731 1.7E-81 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS12430 c76db2c94509aaa2eb58f78487423a0c 751 Pfam PF00664 ABC transporter transmembrane region 182 441 4.7E-35 T 19-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APA12_RS11915 6a457f0b6c1abfd109bf2187aba1e054 100 PIRSF PIRSF001223 1 100 8.0E-50 T 19-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APA12_RS11915 6a457f0b6c1abfd109bf2187aba1e054 100 PANTHER PTHR33569 2 100 7.4E-43 T 19-04-2016 APA12_RS11915 6a457f0b6c1abfd109bf2187aba1e054 100 Gene3D G3DSA:3.30.280.10 1 100 2.3E-49 T 19-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APA12_RS11915 6a457f0b6c1abfd109bf2187aba1e054 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 5.0E-38 T 19-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APA12_RS11915 6a457f0b6c1abfd109bf2187aba1e054 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 33.873 T 19-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APA12_RS11915 6a457f0b6c1abfd109bf2187aba1e054 100 SUPERFAMILY SSF54111 1 100 2.22E-44 T 19-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APA12_RS11915 6a457f0b6c1abfd109bf2187aba1e054 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 100 1.2E-47 T 19-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APA12_RS11915 6a457f0b6c1abfd109bf2187aba1e054 100 Pfam PF00547 Urease, gamma subunit 1 99 6.5E-47 T 19-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APA12_RS11915 6a457f0b6c1abfd109bf2187aba1e054 100 PANTHER PTHR33569:SF1 2 100 7.4E-43 T 19-04-2016 APA12_RS01975 a90abcaaa8c702011ef77e5a4ed86942 474 SUPERFAMILY SSF102114 167 393 2.09E-48 T 19-04-2016 APA12_RS01975 a90abcaaa8c702011ef77e5a4ed86942 474 TIGRFAM TIGR03471 HpnJ: hopanoid biosynthesis associated radical SAM protein HpnJ 1 471 2.5E-248 T 19-04-2016 IPR017834 Hopanoid biosynthesis associated radical SAM protein HpnJ APA12_RS01975 a90abcaaa8c702011ef77e5a4ed86942 474 SMART SM00729 196 402 6.7E-37 T 19-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APA12_RS01975 a90abcaaa8c702011ef77e5a4ed86942 474 PANTHER PTHR11918:SF64 48 408 2.0E-60 T 19-04-2016 APA12_RS01975 a90abcaaa8c702011ef77e5a4ed86942 474 Pfam PF04055 Radical SAM superfamily 202 361 4.5E-22 T 19-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APA12_RS01975 a90abcaaa8c702011ef77e5a4ed86942 474 Gene3D G3DSA:3.80.30.20 195 387 1.4E-45 T 19-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APA12_RS01975 a90abcaaa8c702011ef77e5a4ed86942 474 PANTHER PTHR11918 48 408 2.0E-60 T 19-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein APA12_RS15765 4c84bf737678d4561ee611d81d75adef 138 SMART SM00530 77 132 8.7E-12 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APA12_RS15765 4c84bf737678d4561ee611d81d75adef 138 Gene3D G3DSA:1.10.260.40 74 136 2.6E-16 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APA12_RS15765 4c84bf737678d4561ee611d81d75adef 138 PANTHER PTHR10245 43 135 5.5E-21 T 19-04-2016 APA12_RS15765 4c84bf737678d4561ee611d81d75adef 138 PANTHER PTHR10245:SF38 43 135 5.5E-21 T 19-04-2016 APA12_RS15765 4c84bf737678d4561ee611d81d75adef 138 SUPERFAMILY SSF47413 65 137 6.91E-19 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APA12_RS15765 4c84bf737678d4561ee611d81d75adef 138 Pfam PF01381 Helix-turn-helix 78 132 9.7E-8 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APA12_RS02830 943551650a843ac38da04774acebebb0 734 PANTHER PTHR11733 28 734 9.6E-203 T 19-04-2016 IPR000718 Peptidase M13 GO:0004222|GO:0006508 APA12_RS02830 943551650a843ac38da04774acebebb0 734 SUPERFAMILY SSF55486 87 734 1.76E-205 T 19-04-2016 APA12_RS02830 943551650a843ac38da04774acebebb0 734 Pfam PF05649 Peptidase family M13 99 478 1.0E-99 T 19-04-2016 IPR008753 Peptidase M13, N-terminal domain GO:0006508 APA12_RS02830 943551650a843ac38da04774acebebb0 734 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 632 643 1.8E-20 T 19-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 APA12_RS02830 943551650a843ac38da04774acebebb0 734 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 540 552 1.8E-20 T 19-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 APA12_RS02830 943551650a843ac38da04774acebebb0 734 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 561 577 1.8E-20 T 19-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 APA12_RS02830 943551650a843ac38da04774acebebb0 734 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 522 534 1.8E-20 T 19-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 APA12_RS02830 943551650a843ac38da04774acebebb0 734 PANTHER PTHR11733:SF145 28 734 9.6E-203 T 19-04-2016 APA12_RS02830 943551650a843ac38da04774acebebb0 734 Gene3D G3DSA:3.40.390.10 361 481 5.0E-105 T 19-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APA12_RS02830 943551650a843ac38da04774acebebb0 734 Gene3D G3DSA:3.40.390.10 521 734 5.0E-105 T 19-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APA12_RS02830 943551650a843ac38da04774acebebb0 734 Pfam PF01431 Peptidase family M13 530 731 5.4E-67 T 19-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 APA12_RS03975 98f1652eeb9536bf5839fc206ee65a37 306 Gene3D G3DSA:1.10.150.130 6 98 4.1E-26 T 19-04-2016 IPR023109 Integrase/recombinase, N-terminal APA12_RS03975 98f1652eeb9536bf5839fc206ee65a37 306 PANTHER PTHR30349 9 299 2.1E-88 T 19-04-2016 APA12_RS03975 98f1652eeb9536bf5839fc206ee65a37 306 Gene3D G3DSA:1.10.443.10 109 292 3.5E-51 T 19-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APA12_RS03975 98f1652eeb9536bf5839fc206ee65a37 306 Pfam PF00589 Phage integrase family 110 285 3.8E-44 T 19-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APA12_RS03975 98f1652eeb9536bf5839fc206ee65a37 306 SUPERFAMILY SSF56349 7 292 1.35E-55 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APA12_RS03975 98f1652eeb9536bf5839fc206ee65a37 306 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 2 299 27.511 T 19-04-2016 IPR023009 Tyrosine recombinase XerC/XerD APA12_RS03975 98f1652eeb9536bf5839fc206ee65a37 306 PANTHER PTHR30349:SF5 9 299 2.1E-88 T 19-04-2016 APA12_RS03975 98f1652eeb9536bf5839fc206ee65a37 306 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 6 88 1.6E-17 T 19-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 APA12_RS11315 31e53f53c54fa10a0cb1210868f0853c 149 PANTHER PTHR30558 16 142 8.3E-64 T 19-04-2016 APA12_RS11315 31e53f53c54fa10a0cb1210868f0853c 149 TIGRFAM TIGR02803 ExbD_1: TonB system transport protein ExbD 15 134 5.1E-57 T 19-04-2016 IPR014170 TonB system transport protein ExbD type-1 GO:0006810|GO:0016020 APA12_RS11315 31e53f53c54fa10a0cb1210868f0853c 149 PANTHER PTHR30558:SF9 16 142 8.3E-64 T 19-04-2016 APA12_RS11315 31e53f53c54fa10a0cb1210868f0853c 149 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 133 3.2E-29 T 19-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 APA12_RS02040 c97ae4d5473f33c38e90c90d553d477d 335 Gene3D G3DSA:3.40.50.720 4 245 6.2E-47 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS02040 c97ae4d5473f33c38e90c90d553d477d 335 PANTHER PTHR24322 152 190 2.8E-32 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS02040 c97ae4d5473f33c38e90c90d553d477d 335 PANTHER PTHR24322 8 136 2.8E-32 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS02040 c97ae4d5473f33c38e90c90d553d477d 335 PANTHER PTHR24322:SF57 152 190 2.8E-32 T 19-04-2016 APA12_RS02040 c97ae4d5473f33c38e90c90d553d477d 335 PANTHER PTHR24322:SF57 8 136 2.8E-32 T 19-04-2016 APA12_RS02040 c97ae4d5473f33c38e90c90d553d477d 335 SUPERFAMILY SSF51735 4 254 1.71E-49 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS02040 c97ae4d5473f33c38e90c90d553d477d 335 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 9.9E-12 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS02040 c97ae4d5473f33c38e90c90d553d477d 335 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 9.9E-12 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS02040 c97ae4d5473f33c38e90c90d553d477d 335 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 9.9E-12 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS02040 c97ae4d5473f33c38e90c90d553d477d 335 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 9.9E-12 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS02040 c97ae4d5473f33c38e90c90d553d477d 335 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 9.9E-12 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS02040 c97ae4d5473f33c38e90c90d553d477d 335 Pfam PF00106 short chain dehydrogenase 4 191 2.8E-33 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS11700 eaf269f9d8bc86662d97a84b30a3651f 280 Pfam PF00005 ABC transporter 77 208 2.8E-17 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS11700 eaf269f9d8bc86662d97a84b30a3651f 280 PANTHER PTHR24220:SF117 74 275 2.0E-74 T 19-04-2016 APA12_RS11700 eaf269f9d8bc86662d97a84b30a3651f 280 SUPERFAMILY SSF52540 74 272 2.83E-39 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS11700 eaf269f9d8bc86662d97a84b30a3651f 280 SMART SM00382 86 260 5.1E-6 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS11700 eaf269f9d8bc86662d97a84b30a3651f 280 Gene3D G3DSA:3.40.50.300 74 274 1.4E-38 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS11700 eaf269f9d8bc86662d97a84b30a3651f 280 PANTHER PTHR24220 74 275 2.0E-74 T 19-04-2016 APA12_RS10530 5a7bb620e5c7a86b3168523447e6c283 250 SUPERFAMILY SSF51735 7 222 7.12E-57 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS10530 5a7bb620e5c7a86b3168523447e6c283 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 8.1E-9 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS10530 5a7bb620e5c7a86b3168523447e6c283 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 8.1E-9 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS10530 5a7bb620e5c7a86b3168523447e6c283 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 8.1E-9 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS10530 5a7bb620e5c7a86b3168523447e6c283 250 PANTHER PTHR24319:SF32 7 238 1.0E-72 T 19-04-2016 APA12_RS10530 5a7bb620e5c7a86b3168523447e6c283 250 Pfam PF00106 short chain dehydrogenase 8 185 5.1E-44 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS10530 5a7bb620e5c7a86b3168523447e6c283 250 PANTHER PTHR24319 7 238 1.0E-72 T 19-04-2016 APA12_RS10530 5a7bb620e5c7a86b3168523447e6c283 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 5.5E-26 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS10530 5a7bb620e5c7a86b3168523447e6c283 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 5.5E-26 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS10530 5a7bb620e5c7a86b3168523447e6c283 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 5.5E-26 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS10530 5a7bb620e5c7a86b3168523447e6c283 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 5.5E-26 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS10530 5a7bb620e5c7a86b3168523447e6c283 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 5.5E-26 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS10530 5a7bb620e5c7a86b3168523447e6c283 250 Gene3D G3DSA:3.40.50.720 7 224 1.2E-57 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS06580 b445e0b1c79ab8009a6f7aadfb39023d 327 Gene3D G3DSA:2.40.50.100 48 81 2.1E-12 T 19-04-2016 APA12_RS06580 b445e0b1c79ab8009a6f7aadfb39023d 327 Gene3D G3DSA:2.40.50.100 184 215 2.1E-12 T 19-04-2016 APA12_RS06580 b445e0b1c79ab8009a6f7aadfb39023d 327 SUPERFAMILY SSF111369 46 224 1.19E-10 T 19-04-2016 APA12_RS06580 b445e0b1c79ab8009a6f7aadfb39023d 327 PANTHER PTHR30438:SF1 7 327 3.9E-49 T 19-04-2016 APA12_RS06580 b445e0b1c79ab8009a6f7aadfb39023d 327 PANTHER PTHR30438 7 327 3.9E-49 T 19-04-2016 APA12_RS06580 b445e0b1c79ab8009a6f7aadfb39023d 327 Pfam PF13437 HlyD family secretion protein 186 299 1.1E-10 T 19-04-2016 APA12_RS06580 b445e0b1c79ab8009a6f7aadfb39023d 327 Pfam PF13533 Biotin-lipoyl like 49 94 2.3E-7 T 19-04-2016 APA12_RS06165 390ba561892c9e7f10ee60d67eef311a 370 Pfam PF02885 Glycosyl transferase family, helical bundle domain 20 79 3.4E-16 T 19-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain APA12_RS06165 390ba561892c9e7f10ee60d67eef311a 370 Pfam PF00591 Glycosyl transferase family, a/b domain 90 333 3.9E-75 T 19-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 APA12_RS06165 390ba561892c9e7f10ee60d67eef311a 370 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 20 364 34.389 T 19-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 APA12_RS06165 390ba561892c9e7f10ee60d67eef311a 370 PANTHER PTHR11922:SF5 82 363 2.0E-90 T 19-04-2016 APA12_RS06165 390ba561892c9e7f10ee60d67eef311a 370 PANTHER PTHR11922:SF5 43 53 2.0E-90 T 19-04-2016 APA12_RS06165 390ba561892c9e7f10ee60d67eef311a 370 PANTHER PTHR11922 82 363 2.0E-90 T 19-04-2016 APA12_RS06165 390ba561892c9e7f10ee60d67eef311a 370 PANTHER PTHR11922 43 53 2.0E-90 T 19-04-2016 APA12_RS06165 390ba561892c9e7f10ee60d67eef311a 370 SUPERFAMILY SSF52418 91 363 5.63E-79 T 19-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 APA12_RS06165 390ba561892c9e7f10ee60d67eef311a 370 Gene3D G3DSA:1.20.970.10 20 85 6.2E-20 T 19-04-2016 APA12_RS06165 390ba561892c9e7f10ee60d67eef311a 370 Gene3D G3DSA:3.40.1030.10 89 362 6.3E-90 T 19-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 APA12_RS06165 390ba561892c9e7f10ee60d67eef311a 370 SUPERFAMILY SSF47648 19 84 1.7E-16 T 19-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain APA12_RS06165 390ba561892c9e7f10ee60d67eef311a 370 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 23 359 2.8E-100 T 19-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 APA12_RS01250 26638447dacfa8bdf68f32ce7e2999e8 497 Pfam PF00324 Amino acid permease 32 466 5.5E-109 T 19-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 APA12_RS01250 26638447dacfa8bdf68f32ce7e2999e8 497 PIRSF PIRSF006060 11 477 3.2E-56 T 19-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APA12_RS01250 26638447dacfa8bdf68f32ce7e2999e8 497 PANTHER PTHR11785:SF25 18 497 4.0E-228 T 19-04-2016 APA12_RS01250 26638447dacfa8bdf68f32ce7e2999e8 497 PANTHER PTHR11785 18 497 4.0E-228 T 19-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APA12_RS01585 f154cc2501e60d35c8db8ec13c4d90b4 492 PIRSF PIRSF034081 1 492 7.0E-222 T 19-04-2016 IPR014588 ATPase, Atu1862 type, predicted APA12_RS01585 f154cc2501e60d35c8db8ec13c4d90b4 492 Gene3D G3DSA:3.40.50.300 14 256 9.7E-33 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS01585 f154cc2501e60d35c8db8ec13c4d90b4 492 SUPERFAMILY SSF52540 5 255 1.31E-26 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS01585 f154cc2501e60d35c8db8ec13c4d90b4 492 SMART SM00382 24 214 0.0078 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS01585 f154cc2501e60d35c8db8ec13c4d90b4 492 Pfam PF01935 Domain of unknown function DUF87 15 76 2.7E-7 T 19-04-2016 IPR002789 Helicase HerA, central domain APA12_RS07165 6707daa4e17b29a68288fd723991be60 182 Gene3D G3DSA:1.10.540.10 6 96 1.4E-10 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 APA12_RS07165 6707daa4e17b29a68288fd723991be60 182 Gene3D G3DSA:1.20.140.10 132 170 7.2E-6 T 19-04-2016 APA12_RS07165 6707daa4e17b29a68288fd723991be60 182 SUPERFAMILY SSF56645 13 128 8.88E-9 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 APA12_RS11105 07ae88059a90cb89f95fcb146d23cd80 122 Pfam PF13560 Helix-turn-helix domain 13 70 8.2E-13 T 19-04-2016 APA12_RS11105 07ae88059a90cb89f95fcb146d23cd80 122 Gene3D G3DSA:1.10.260.40 13 75 2.1E-18 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APA12_RS11105 07ae88059a90cb89f95fcb146d23cd80 122 PANTHER PTHR10245 1 119 7.6E-12 T 19-04-2016 APA12_RS11105 07ae88059a90cb89f95fcb146d23cd80 122 SMART SM00530 17 72 3.0E-13 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APA12_RS11105 07ae88059a90cb89f95fcb146d23cd80 122 SUPERFAMILY SSF47413 13 79 2.25E-16 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APA12_RS13385 f78ed6c3a8db286b12999613e05460b8 413 PANTHER PTHR23513:SF9 18 407 3.0E-102 T 19-04-2016 APA12_RS13385 f78ed6c3a8db286b12999613e05460b8 413 Gene3D G3DSA:1.20.1250.20 45 198 5.3E-14 T 19-04-2016 APA12_RS13385 f78ed6c3a8db286b12999613e05460b8 413 Gene3D G3DSA:1.20.1250.20 218 400 1.1E-7 T 19-04-2016 APA12_RS13385 f78ed6c3a8db286b12999613e05460b8 413 SUPERFAMILY SSF103473 18 401 1.22E-35 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS13385 f78ed6c3a8db286b12999613e05460b8 413 Pfam PF05977 Transmembrane secretion effector 25 404 3.6E-34 T 19-04-2016 IPR010290 Transmembrane secretion effector APA12_RS13385 f78ed6c3a8db286b12999613e05460b8 413 PANTHER PTHR23513 18 407 3.0E-102 T 19-04-2016 APA12_RS03665 91dbd774a8ebe1e00c3e6d9ad4d33ccb 316 SUPERFAMILY SSF64397 23 268 7.85E-56 T 19-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 APA12_RS03665 91dbd774a8ebe1e00c3e6d9ad4d33ccb 316 PANTHER PTHR30111 33 312 1.7E-45 T 19-04-2016 APA12_RS03665 91dbd774a8ebe1e00c3e6d9ad4d33ccb 316 PIRSF PIRSF005261 13 316 1.8E-69 T 19-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 APA12_RS03665 91dbd774a8ebe1e00c3e6d9ad4d33ccb 316 Gene3D G3DSA:3.90.1280.10 262 312 5.0E-17 T 19-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 APA12_RS03665 91dbd774a8ebe1e00c3e6d9ad4d33ccb 316 PANTHER PTHR30111:SF1 33 312 1.7E-45 T 19-04-2016 APA12_RS03665 91dbd774a8ebe1e00c3e6d9ad4d33ccb 316 Pfam PF01430 Hsp33 protein 23 306 1.6E-74 T 19-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 APA12_RS03665 91dbd774a8ebe1e00c3e6d9ad4d33ccb 316 SUPERFAMILY SSF118352 260 312 1.31E-15 T 19-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 APA12_RS03665 91dbd774a8ebe1e00c3e6d9ad4d33ccb 316 Gene3D G3DSA:3.55.30.10 23 261 2.2E-62 T 19-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 APA12_RS11865 4e7cb00254db7a614953ad141fa3c2ee 103 Gene3D G3DSA:1.10.10.10 4 57 2.0E-8 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS11865 4e7cb00254db7a614953ad141fa3c2ee 103 Pfam PF01527 Transposase 5 56 2.2E-8 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 APA12_RS11865 4e7cb00254db7a614953ad141fa3c2ee 103 PANTHER PTHR33215:SF2 3 99 2.8E-24 T 19-04-2016 APA12_RS11865 4e7cb00254db7a614953ad141fa3c2ee 103 SUPERFAMILY SSF48295 3 63 8.89E-14 T 19-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 APA12_RS11865 4e7cb00254db7a614953ad141fa3c2ee 103 PANTHER PTHR33215 3 99 2.8E-24 T 19-04-2016 APA12_RS05900 d40d8528fb335b8bb35af2167b066ab3 307 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 15 298 5.6E-48 T 19-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 APA12_RS05900 d40d8528fb335b8bb35af2167b066ab3 307 PANTHER PTHR30606 53 298 8.2E-54 T 19-04-2016 APA12_RS02495 af4fab34143d43bebb4c24af9b0e677c 416 SUPERFAMILY SSF51971 111 348 1.88E-19 T 19-04-2016 APA12_RS02495 af4fab34143d43bebb4c24af9b0e677c 416 Gene3D G3DSA:3.40.50.720 274 360 1.1E-29 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS02495 af4fab34143d43bebb4c24af9b0e677c 416 Gene3D G3DSA:3.40.50.720 114 199 1.1E-29 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS02495 af4fab34143d43bebb4c24af9b0e677c 416 ProSitePatterns PS00677 D-amino acid oxidases signature. 82 100 - T 19-04-2016 IPR006181 D-amino acid oxidase, conserved site GO:0003884|GO:0055114 APA12_RS02495 af4fab34143d43bebb4c24af9b0e677c 416 PANTHER PTHR11530 260 355 6.9E-49 T 19-04-2016 IPR023209 D-amino-acid oxidase GO:0003884|GO:0046416|GO:0071949 APA12_RS02495 af4fab34143d43bebb4c24af9b0e677c 416 PANTHER PTHR11530:SF10 260 355 6.9E-49 T 19-04-2016 APA12_RS02495 af4fab34143d43bebb4c24af9b0e677c 416 PANTHER PTHR11530:SF10 112 243 6.9E-49 T 19-04-2016 APA12_RS02495 af4fab34143d43bebb4c24af9b0e677c 416 Gene3D G3DSA:3.40.50.720 53 112 5.3E-15 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS02495 af4fab34143d43bebb4c24af9b0e677c 416 PANTHER PTHR11530 112 243 6.9E-49 T 19-04-2016 IPR023209 D-amino-acid oxidase GO:0003884|GO:0046416|GO:0071949 APA12_RS02495 af4fab34143d43bebb4c24af9b0e677c 416 Pfam PF01266 FAD dependent oxidoreductase 114 408 1.7E-15 T 19-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 APA12_RS06265 c5fe815c7ab53c8f636f5637a5fa4e9a 897 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 15 583 6.3E-207 T 19-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS06265 c5fe815c7ab53c8f636f5637a5fa4e9a 897 SUPERFAMILY SSF46589 832 896 4.6E-15 T 19-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 APA12_RS06265 c5fe815c7ab53c8f636f5637a5fa4e9a 897 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 54 - T 19-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS06265 c5fe815c7ab53c8f636f5637a5fa4e9a 897 Pfam PF08264 Anticodon-binding domain of tRNA 627 774 7.7E-35 T 19-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 APA12_RS06265 c5fe815c7ab53c8f636f5637a5fa4e9a 897 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 832 896 4.5E-16 T 19-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 APA12_RS06265 c5fe815c7ab53c8f636f5637a5fa4e9a 897 PANTHER PTHR11946:SF5 327 809 0.0 T 19-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APA12_RS06265 c5fe815c7ab53c8f636f5637a5fa4e9a 897 PANTHER PTHR11946:SF5 828 890 0.0 T 19-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APA12_RS06265 c5fe815c7ab53c8f636f5637a5fa4e9a 897 PANTHER PTHR11946:SF5 2 309 0.0 T 19-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APA12_RS06265 c5fe815c7ab53c8f636f5637a5fa4e9a 897 Gene3D G3DSA:1.10.730.10 585 765 5.9E-52 T 19-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS06265 c5fe815c7ab53c8f636f5637a5fa4e9a 897 Gene3D G3DSA:3.90.740.10 195 354 4.1E-48 T 19-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APA12_RS06265 c5fe815c7ab53c8f636f5637a5fa4e9a 897 Hamap MF_02004 Valine--tRNA ligase [valS]. 2 897 15.746 T 19-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APA12_RS06265 c5fe815c7ab53c8f636f5637a5fa4e9a 897 PRINTS PR00986 Valyl-tRNA synthetase signature 496 514 8.3E-39 T 19-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APA12_RS06265 c5fe815c7ab53c8f636f5637a5fa4e9a 897 PRINTS PR00986 Valyl-tRNA synthetase signature 36 47 8.3E-39 T 19-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APA12_RS06265 c5fe815c7ab53c8f636f5637a5fa4e9a 897 PRINTS PR00986 Valyl-tRNA synthetase signature 465 486 8.3E-39 T 19-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APA12_RS06265 c5fe815c7ab53c8f636f5637a5fa4e9a 897 PRINTS PR00986 Valyl-tRNA synthetase signature 363 376 8.3E-39 T 19-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APA12_RS06265 c5fe815c7ab53c8f636f5637a5fa4e9a 897 PRINTS PR00986 Valyl-tRNA synthetase signature 231 248 8.3E-39 T 19-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APA12_RS06265 c5fe815c7ab53c8f636f5637a5fa4e9a 897 TIGRFAM TIGR00422 valS: valine--tRNA ligase 3 879 0.0 T 19-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APA12_RS06265 c5fe815c7ab53c8f636f5637a5fa4e9a 897 SUPERFAMILY SSF47323 596 846 2.43E-50 T 19-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS06265 c5fe815c7ab53c8f636f5637a5fa4e9a 897 SUPERFAMILY SSF52374 4 192 1.3E-138 T 19-04-2016 APA12_RS06265 c5fe815c7ab53c8f636f5637a5fa4e9a 897 SUPERFAMILY SSF52374 358 592 1.3E-138 T 19-04-2016 APA12_RS06265 c5fe815c7ab53c8f636f5637a5fa4e9a 897 SUPERFAMILY SSF50677 191 359 2.75E-58 T 19-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APA12_RS06265 c5fe815c7ab53c8f636f5637a5fa4e9a 897 Gene3D G3DSA:1.10.287.380 825 897 5.6E-12 T 19-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 APA12_RS06265 c5fe815c7ab53c8f636f5637a5fa4e9a 897 Gene3D G3DSA:3.40.50.620 358 582 2.9E-148 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS06265 c5fe815c7ab53c8f636f5637a5fa4e9a 897 Gene3D G3DSA:3.40.50.620 5 193 2.9E-148 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS06265 c5fe815c7ab53c8f636f5637a5fa4e9a 897 PANTHER PTHR11946 327 809 0.0 T 19-04-2016 APA12_RS06265 c5fe815c7ab53c8f636f5637a5fa4e9a 897 PANTHER PTHR11946 828 890 0.0 T 19-04-2016 APA12_RS06265 c5fe815c7ab53c8f636f5637a5fa4e9a 897 PANTHER PTHR11946 2 309 0.0 T 19-04-2016 APA12_RS00655 1ce7a63a3e951fed8192a9fc27d4d7a7 272 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 12 264 1.4E-82 T 19-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 APA12_RS00655 1ce7a63a3e951fed8192a9fc27d4d7a7 272 SUPERFAMILY SSF161098 10 259 1.05E-48 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS00655 1ce7a63a3e951fed8192a9fc27d4d7a7 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 73 268 1.9E-17 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS00655 1ce7a63a3e951fed8192a9fc27d4d7a7 272 PANTHER PTHR30406 7 272 1.5E-117 T 19-04-2016 APA12_RS00655 1ce7a63a3e951fed8192a9fc27d4d7a7 272 PANTHER PTHR30406:SF1 7 272 1.5E-117 T 19-04-2016 APA12_RS00655 1ce7a63a3e951fed8192a9fc27d4d7a7 272 Gene3D G3DSA:1.10.3720.10 17 262 2.5E-46 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS08855 098c274cee7764d5c26586f5980ab43a 754 SUPERFAMILY SSF47384 511 587 3.92E-11 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS08855 098c274cee7764d5c26586f5980ab43a 754 Gene3D G3DSA:1.10.287.130 512 585 7.0E-9 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS08855 098c274cee7764d5c26586f5980ab43a 754 PANTHER PTHR24423 400 649 1.8E-68 T 19-04-2016 APA12_RS08855 098c274cee7764d5c26586f5980ab43a 754 PANTHER PTHR24423 665 746 1.8E-68 T 19-04-2016 APA12_RS08855 098c274cee7764d5c26586f5980ab43a 754 PANTHER PTHR24423 23 31 1.8E-68 T 19-04-2016 APA12_RS08855 098c274cee7764d5c26586f5980ab43a 754 SMART SM00388 518 589 1.4E-10 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS08855 098c274cee7764d5c26586f5980ab43a 754 Pfam PF00672 HAMP domain 316 383 1.3E-15 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APA12_RS08855 098c274cee7764d5c26586f5980ab43a 754 PIRSF PIRSF037532 12 753 3.4E-239 T 19-04-2016 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator APA12_RS08855 098c274cee7764d5c26586f5980ab43a 754 PRINTS PR00344 Bacterial sensor protein C-terminal signature 680 694 1.6E-10 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS08855 098c274cee7764d5c26586f5980ab43a 754 PRINTS PR00344 Bacterial sensor protein C-terminal signature 709 727 1.6E-10 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS08855 098c274cee7764d5c26586f5980ab43a 754 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 630 747 2.6E-18 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS08855 098c274cee7764d5c26586f5980ab43a 754 SMART SM00304 335 388 8.1E-12 T 19-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APA12_RS08855 098c274cee7764d5c26586f5980ab43a 754 Pfam PF00512 His Kinase A (phospho-acceptor) domain 521 586 7.4E-9 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS08855 098c274cee7764d5c26586f5980ab43a 754 SUPERFAMILY SSF55874 588 746 1.57E-29 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS08855 098c274cee7764d5c26586f5980ab43a 754 SMART SM00387 629 750 5.9E-24 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS08855 098c274cee7764d5c26586f5980ab43a 754 Gene3D G3DSA:3.30.450.20 398 508 2.3E-8 T 19-04-2016 APA12_RS08855 098c274cee7764d5c26586f5980ab43a 754 SUPERFAMILY SSF158472 337 385 3.53E-10 T 19-04-2016 APA12_RS08855 098c274cee7764d5c26586f5980ab43a 754 Gene3D G3DSA:3.30.565.10 594 746 5.8E-33 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS08855 098c274cee7764d5c26586f5980ab43a 754 SUPERFAMILY SSF55785 388 508 1.81E-5 T 19-04-2016 IPR000014 PAS domain APA12_RS08855 098c274cee7764d5c26586f5980ab43a 754 PANTHER PTHR24423:SF520 400 649 1.8E-68 T 19-04-2016 APA12_RS08855 098c274cee7764d5c26586f5980ab43a 754 PANTHER PTHR24423:SF520 665 746 1.8E-68 T 19-04-2016 APA12_RS08855 098c274cee7764d5c26586f5980ab43a 754 PANTHER PTHR24423:SF520 23 31 1.8E-68 T 19-04-2016 APA12_RS02180 2e8e0498a12b7d375b08f1340a79b580 203 Pfam PF13586 Transposase DDE domain 118 202 4.4E-16 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS02180 2e8e0498a12b7d375b08f1340a79b580 203 PANTHER PTHR30007 57 201 1.3E-27 T 19-04-2016 APA12_RS02180 2e8e0498a12b7d375b08f1340a79b580 203 PANTHER PTHR30007:SF22 57 201 1.3E-27 T 19-04-2016 APA12_RS11595 2e8e0498a12b7d375b08f1340a79b580 203 Pfam PF13586 Transposase DDE domain 118 202 4.4E-16 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS11595 2e8e0498a12b7d375b08f1340a79b580 203 PANTHER PTHR30007 57 201 1.3E-27 T 19-04-2016 APA12_RS11595 2e8e0498a12b7d375b08f1340a79b580 203 PANTHER PTHR30007:SF22 57 201 1.3E-27 T 19-04-2016 APA12_RS07360 a1a6b5f5d1faaf61576dd7ce6ff4b718 410 SUPERFAMILY SSF55124 251 294 3.6E-7 T 19-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APA12_RS07360 a1a6b5f5d1faaf61576dd7ce6ff4b718 410 TIGRFAM TIGR02435 CobG: precorrin-3B synthase 11 370 3.7E-72 T 19-04-2016 IPR012798 Cobalamin (vitamin B12) biosynthesis CobG-like APA12_RS07360 a1a6b5f5d1faaf61576dd7ce6ff4b718 410 Gene3D G3DSA:3.30.413.10 311 381 2.7E-4 T 19-04-2016 APA12_RS07360 a1a6b5f5d1faaf61576dd7ce6ff4b718 410 PANTHER PTHR32439 10 365 1.0E-34 T 19-04-2016 APA12_RS07360 a1a6b5f5d1faaf61576dd7ce6ff4b718 410 PANTHER PTHR32439:SF3 10 365 1.0E-34 T 19-04-2016 APA12_RS07360 a1a6b5f5d1faaf61576dd7ce6ff4b718 410 Gene3D G3DSA:3.90.480.10 234 292 3.7E-13 T 19-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APA12_RS07360 a1a6b5f5d1faaf61576dd7ce6ff4b718 410 Gene3D G3DSA:3.90.480.10 23 92 3.7E-13 T 19-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APA12_RS07360 a1a6b5f5d1faaf61576dd7ce6ff4b718 410 SUPERFAMILY SSF56014 309 388 3.66E-9 T 19-04-2016 APA12_RS07360 a1a6b5f5d1faaf61576dd7ce6ff4b718 410 SUPERFAMILY SSF55124 6 76 5.4E-18 T 19-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APA12_RS07360 a1a6b5f5d1faaf61576dd7ce6ff4b718 410 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 252 291 1.6E-4 T 19-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APA12_RS07360 a1a6b5f5d1faaf61576dd7ce6ff4b718 410 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 23 72 2.6E-10 T 19-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APA12_RS00060 935fb9817f90def0dc0d52f54661d65e 279 SUPERFAMILY SSF102215 38 276 1.07E-51 T 19-04-2016 IPR024087 Creatininase-like domain KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167|UniPathway: UPA00071|UniPathway: UPA00275 APA12_RS00060 935fb9817f90def0dc0d52f54661d65e 279 PANTHER PTHR35005 34 234 6.5E-17 T 19-04-2016 APA12_RS00060 935fb9817f90def0dc0d52f54661d65e 279 Gene3D G3DSA:3.40.50.10310 37 277 2.2E-52 T 19-04-2016 IPR024087 Creatininase-like domain KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167|UniPathway: UPA00071|UniPathway: UPA00275 APA12_RS00060 935fb9817f90def0dc0d52f54661d65e 279 PANTHER PTHR35005:SF1 34 234 6.5E-17 T 19-04-2016 APA12_RS00060 935fb9817f90def0dc0d52f54661d65e 279 Pfam PF02633 Creatinine amidohydrolase 43 272 1.8E-40 T 19-04-2016 IPR003785 Creatininase/formamide hydrolase KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167|UniPathway: UPA00071|UniPathway: UPA00275 APA12_RS05235 aeec39a16f3f13311b88dd6cbb742ba4 866 PANTHER PTHR10110 602 694 5.1E-75 T 19-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 APA12_RS05235 aeec39a16f3f13311b88dd6cbb742ba4 866 PANTHER PTHR10110 9 453 5.1E-75 T 19-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 APA12_RS05235 aeec39a16f3f13311b88dd6cbb742ba4 866 Pfam PF00999 Sodium/hydrogen exchanger family 15 417 2.8E-49 T 19-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 APA12_RS05235 aeec39a16f3f13311b88dd6cbb742ba4 866 PANTHER PTHR10110:SF86 602 694 5.1E-75 T 19-04-2016 APA12_RS05235 aeec39a16f3f13311b88dd6cbb742ba4 866 PANTHER PTHR10110:SF86 9 453 5.1E-75 T 19-04-2016 APA12_RS05235 aeec39a16f3f13311b88dd6cbb742ba4 866 SUPERFAMILY SSF51206 700 823 1.83E-18 T 19-04-2016 IPR018490 Cyclic nucleotide-binding-like APA12_RS05235 aeec39a16f3f13311b88dd6cbb742ba4 866 Pfam PF00027 Cyclic nucleotide-binding domain 728 809 1.6E-6 T 19-04-2016 IPR000595 Cyclic nucleotide-binding domain APA12_RS05235 aeec39a16f3f13311b88dd6cbb742ba4 866 Gene3D G3DSA:2.60.120.10 700 823 1.1E-16 T 19-04-2016 IPR014710 RmlC-like jelly roll fold APA12_RS05235 aeec39a16f3f13311b88dd6cbb742ba4 866 SMART SM00100 709 824 4.3E-7 T 19-04-2016 IPR000595 Cyclic nucleotide-binding domain APA12_RS07920 60b15aae3b8d43901482e5b3a3f05163 237 Pfam PF02308 MgtC family 14 145 1.3E-26 T 19-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 APA12_RS07920 60b15aae3b8d43901482e5b3a3f05163 237 PRINTS PR01837 MgtC/SapB protein signature 36 54 3.2E-26 T 19-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 APA12_RS07920 60b15aae3b8d43901482e5b3a3f05163 237 PRINTS PR01837 MgtC/SapB protein signature 72 94 3.2E-26 T 19-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 APA12_RS07920 60b15aae3b8d43901482e5b3a3f05163 237 PRINTS PR01837 MgtC/SapB protein signature 99 123 3.2E-26 T 19-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 APA12_RS07920 60b15aae3b8d43901482e5b3a3f05163 237 PRINTS PR01837 MgtC/SapB protein signature 17 36 3.2E-26 T 19-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 APA12_RS07920 60b15aae3b8d43901482e5b3a3f05163 237 PANTHER PTHR33778 1 180 4.0E-31 T 19-04-2016 APA12_RS12630 eb62c6153a53ef401733f6184f1de1e9 371 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 120 361 3.9E-99 T 19-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein APA12_RS12630 eb62c6153a53ef401733f6184f1de1e9 371 Hamap MF_02040 Iron-sulfur cluster carrier protein. 115 362 37.059 T 19-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein APA12_RS12630 eb62c6153a53ef401733f6184f1de1e9 371 Pfam PF01883 Domain of unknown function DUF59 10 79 4.2E-14 T 19-04-2016 IPR002744 Domain of unknown function DUF59 APA12_RS12630 eb62c6153a53ef401733f6184f1de1e9 371 PANTHER PTHR23264 2 365 3.4E-146 T 19-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein APA12_RS12630 eb62c6153a53ef401733f6184f1de1e9 371 SUPERFAMILY SSF52540 122 367 5.59E-56 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS12630 eb62c6153a53ef401733f6184f1de1e9 371 ProSitePatterns PS01215 Mrp family signature. 225 241 - T 19-04-2016 IPR000808 Mrp, conserved site GO:0005524 APA12_RS12630 eb62c6153a53ef401733f6184f1de1e9 371 SUPERFAMILY SSF117916 7 92 2.65E-10 T 19-04-2016 APA12_RS12630 eb62c6153a53ef401733f6184f1de1e9 371 Gene3D G3DSA:3.40.50.300 117 360 6.6E-101 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS08505 243e1a05ec4825e94fbbd24968afd2c8 421 Pfam PF00675 Insulinase (Peptidase family M16) 16 162 2.6E-43 T 19-04-2016 IPR011765 Peptidase M16, N-terminal APA12_RS08505 243e1a05ec4825e94fbbd24968afd2c8 421 SUPERFAMILY SSF63411 223 414 3.51E-50 T 19-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APA12_RS08505 243e1a05ec4825e94fbbd24968afd2c8 421 Pfam PF05193 Peptidase M16 inactive domain 170 340 1.4E-40 T 19-04-2016 IPR007863 Peptidase M16, C-terminal APA12_RS08505 243e1a05ec4825e94fbbd24968afd2c8 421 Gene3D G3DSA:3.30.830.10 222 413 1.6E-65 T 19-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APA12_RS08505 243e1a05ec4825e94fbbd24968afd2c8 421 SUPERFAMILY SSF63411 5 208 8.38E-60 T 19-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APA12_RS08505 243e1a05ec4825e94fbbd24968afd2c8 421 Gene3D G3DSA:3.30.830.10 14 220 2.3E-62 T 19-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APA12_RS08505 243e1a05ec4825e94fbbd24968afd2c8 421 PANTHER PTHR11851 7 415 1.4E-150 T 19-04-2016 APA12_RS08505 243e1a05ec4825e94fbbd24968afd2c8 421 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 36 59 - T 19-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 APA12_RS02520 78deb5ae29e98c44827f266aad70d22f 495 Pfam PF13403 Hint domain 154 293 2.6E-39 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS02520 78deb5ae29e98c44827f266aad70d22f 495 SUPERFAMILY SSF51294 155 291 4.45E-8 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS04545 8805e28800ac09e6baac19d37f08570b 97 SUPERFAMILY SSF54909 1 89 1.8E-20 T 19-04-2016 IPR011008 Dimeric alpha-beta barrel APA12_RS04545 8805e28800ac09e6baac19d37f08570b 97 Pfam PF03795 YCII-related domain 1 86 3.1E-18 T 19-04-2016 IPR005545 YCII-related APA12_RS04545 8805e28800ac09e6baac19d37f08570b 97 Gene3D G3DSA:3.30.70.1060 1 90 1.5E-23 T 19-04-2016 APA12_RS04545 8805e28800ac09e6baac19d37f08570b 97 PANTHER PTHR33606 1 95 4.6E-15 T 19-04-2016 APA12_RS13140 a946567d1e360296abe6e229bb4ff24d 301 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 11 295 1.8E-89 T 19-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family APA12_RS13140 a946567d1e360296abe6e229bb4ff24d 301 SUPERFAMILY SSF51735 11 296 1.45E-89 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS13140 a946567d1e360296abe6e229bb4ff24d 301 Gene3D G3DSA:3.40.50.720 11 237 3.8E-52 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS13140 a946567d1e360296abe6e229bb4ff24d 301 PANTHER PTHR10491 5 293 9.8E-78 T 19-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family APA12_RS13140 a946567d1e360296abe6e229bb4ff24d 301 Pfam PF04321 RmlD substrate binding domain 11 295 1.9E-96 T 19-04-2016 IPR029903 RmlD-like substrate binding domain APA12_RS05210 6566e29aa470f0ffbfc2c9ccffb1925b 356 Pfam PF01409 tRNA synthetases class II core domain (F) 93 340 7.6E-96 T 19-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 APA12_RS05210 6566e29aa470f0ffbfc2c9ccffb1925b 356 Gene3D G3DSA:3.30.930.10 10 342 1.2E-117 T 19-04-2016 APA12_RS05210 6566e29aa470f0ffbfc2c9ccffb1925b 356 SUPERFAMILY SSF55681 93 342 3.59E-71 T 19-04-2016 APA12_RS05210 6566e29aa470f0ffbfc2c9ccffb1925b 356 SUPERFAMILY SSF46589 14 98 5.18E-17 T 19-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 APA12_RS05210 6566e29aa470f0ffbfc2c9ccffb1925b 356 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 40 340 2.7E-96 T 19-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 APA12_RS05210 6566e29aa470f0ffbfc2c9ccffb1925b 356 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 9 342 44.333 T 19-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 APA12_RS05210 6566e29aa470f0ffbfc2c9ccffb1925b 356 PANTHER PTHR11538 40 53 3.2E-94 T 19-04-2016 APA12_RS05210 6566e29aa470f0ffbfc2c9ccffb1925b 356 PANTHER PTHR11538 91 340 3.2E-94 T 19-04-2016 APA12_RS05210 6566e29aa470f0ffbfc2c9ccffb1925b 356 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 88 3.6E-20 T 19-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 APA12_RS09550 128d8d7322f8f98912b580631ea9b6e2 104 SUPERFAMILY SSF141091 1 102 1.57E-37 T 19-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 APA12_RS09550 128d8d7322f8f98912b580631ea9b6e2 104 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 6.0E-41 T 19-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 APA12_RS09550 128d8d7322f8f98912b580631ea9b6e2 104 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 26.972 T 19-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS09550 128d8d7322f8f98912b580631ea9b6e2 104 PANTHER PTHR21349 1 101 3.9E-45 T 19-04-2016 APA12_RS09550 128d8d7322f8f98912b580631ea9b6e2 104 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 102 2.1E-35 T 19-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS06685 92565d37c0c69584319e442a4a4429b9 266 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 5 261 8.3E-93 T 19-04-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 APA12_RS06685 92565d37c0c69584319e442a4a4429b9 266 PANTHER PTHR20858:SF17 4 265 2.6E-112 T 19-04-2016 APA12_RS06685 92565d37c0c69584319e442a4a4429b9 266 PANTHER PTHR20858 4 265 2.6E-112 T 19-04-2016 APA12_RS06685 92565d37c0c69584319e442a4a4429b9 266 SUPERFAMILY SSF53613 2 265 5.3E-76 T 19-04-2016 IPR029056 Ribokinase-like APA12_RS06685 92565d37c0c69584319e442a4a4429b9 266 Pfam PF08543 Phosphomethylpyrimidine kinase 12 259 7.7E-91 T 19-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 APA12_RS06685 92565d37c0c69584319e442a4a4429b9 266 Gene3D G3DSA:3.40.1190.20 4 262 1.3E-98 T 19-04-2016 IPR029056 Ribokinase-like APA12_RS10820 95f79888b27609922208fd841873e002 215 Gene3D G3DSA:3.90.226.10 37 210 1.2E-60 T 19-04-2016 IPR029045 ClpP/crotonase-like domain APA12_RS10820 95f79888b27609922208fd841873e002 215 Pfam PF00574 Clp protease 39 209 4.0E-61 T 19-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA APA12_RS10820 95f79888b27609922208fd841873e002 215 PANTHER PTHR10381 41 208 5.6E-64 T 19-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA APA12_RS10820 95f79888b27609922208fd841873e002 215 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 20 211 35.065 T 19-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APA12_RS10820 95f79888b27609922208fd841873e002 215 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 130 143 - T 19-04-2016 IPR033135 ClpP, histidine active site APA12_RS10820 95f79888b27609922208fd841873e002 215 PRINTS PR00127 Clp protease catalytic subunit P signature 108 125 2.9E-29 T 19-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APA12_RS10820 95f79888b27609922208fd841873e002 215 PRINTS PR00127 Clp protease catalytic subunit P signature 36 51 2.9E-29 T 19-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APA12_RS10820 95f79888b27609922208fd841873e002 215 PRINTS PR00127 Clp protease catalytic subunit P signature 186 205 2.9E-29 T 19-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APA12_RS10820 95f79888b27609922208fd841873e002 215 PRINTS PR00127 Clp protease catalytic subunit P signature 129 148 2.9E-29 T 19-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APA12_RS10820 95f79888b27609922208fd841873e002 215 PRINTS PR00127 Clp protease catalytic subunit P signature 75 95 2.9E-29 T 19-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APA12_RS10820 95f79888b27609922208fd841873e002 215 SUPERFAMILY SSF52096 36 210 1.57E-53 T 19-04-2016 IPR029045 ClpP/crotonase-like domain APA12_RS04540 260f440797122022212040c4be4c015c 257 PANTHER PTHR30071 14 234 4.4E-63 T 19-04-2016 APA12_RS04540 260f440797122022212040c4be4c015c 257 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 55 237 9.2E-73 T 19-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APA12_RS04540 260f440797122022212040c4be4c015c 257 Pfam PF01578 Cytochrome C assembly protein 40 194 2.1E-26 T 19-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 APA12_RS04540 260f440797122022212040c4be4c015c 257 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 131 151 7.6E-53 T 19-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APA12_RS04540 260f440797122022212040c4be4c015c 257 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 72 92 7.6E-53 T 19-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APA12_RS04540 260f440797122022212040c4be4c015c 257 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 214 238 7.6E-53 T 19-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APA12_RS04540 260f440797122022212040c4be4c015c 257 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 55 72 7.6E-53 T 19-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APA12_RS04540 260f440797122022212040c4be4c015c 257 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 110 130 7.6E-53 T 19-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APA12_RS04540 260f440797122022212040c4be4c015c 257 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 166 192 7.6E-53 T 19-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APA12_RS07310 b6f2a3aaec7d845de0bf200ff01d7b03 214 TIGRFAM TIGR02182 GRXB: glutaredoxin, GrxB family 3 209 1.7E-72 T 19-04-2016 IPR011901 Glutaredoxin, GrxB GO:0009055|GO:0015035 APA12_RS07310 b6f2a3aaec7d845de0bf200ff01d7b03 214 PANTHER PTHR11260:SF237 3 206 3.0E-35 T 19-04-2016 APA12_RS07310 b6f2a3aaec7d845de0bf200ff01d7b03 214 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 72 3.2E-9 T 19-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APA12_RS07310 b6f2a3aaec7d845de0bf200ff01d7b03 214 Gene3D G3DSA:3.40.30.10 9 77 1.8E-22 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS07310 b6f2a3aaec7d845de0bf200ff01d7b03 214 PANTHER PTHR11260 3 206 3.0E-35 T 19-04-2016 APA12_RS07310 b6f2a3aaec7d845de0bf200ff01d7b03 214 Gene3D G3DSA:1.20.1050.10 92 214 1.2E-37 T 19-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APA12_RS07310 b6f2a3aaec7d845de0bf200ff01d7b03 214 Pfam PF04399 Glutaredoxin 2, C terminal domain 84 213 7.1E-41 T 19-04-2016 IPR007494 Glutaredoxin 2, C-terminal APA12_RS07310 b6f2a3aaec7d845de0bf200ff01d7b03 214 SUPERFAMILY SSF47616 76 214 2.72E-36 T 19-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APA12_RS07310 b6f2a3aaec7d845de0bf200ff01d7b03 214 ProSitePatterns PS00195 Glutaredoxin active site. 4 19 - T 19-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 APA12_RS07310 b6f2a3aaec7d845de0bf200ff01d7b03 214 SUPERFAMILY SSF52833 2 80 1.35E-15 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS06725 8353618c18ebbdfdd42b177d1c92f6a7 438 PANTHER PTHR19375 21 256 3.6E-71 T 19-04-2016 APA12_RS06725 8353618c18ebbdfdd42b177d1c92f6a7 438 PANTHER PTHR19375 311 435 3.6E-71 T 19-04-2016 APA12_RS06725 8353618c18ebbdfdd42b177d1c92f6a7 438 Gene3D G3DSA:3.30.420.40 22 209 2.5E-19 T 19-04-2016 APA12_RS06725 8353618c18ebbdfdd42b177d1c92f6a7 438 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 395 409 - T 19-04-2016 IPR018181 Heat shock protein 70, conserved site APA12_RS06725 8353618c18ebbdfdd42b177d1c92f6a7 438 Gene3D G3DSA:3.30.420.40 210 239 2.8E-15 T 19-04-2016 APA12_RS06725 8353618c18ebbdfdd42b177d1c92f6a7 438 Gene3D G3DSA:3.30.420.40 377 419 2.8E-15 T 19-04-2016 APA12_RS06725 8353618c18ebbdfdd42b177d1c92f6a7 438 SUPERFAMILY SSF53067 317 436 9.91E-32 T 19-04-2016 APA12_RS06725 8353618c18ebbdfdd42b177d1c92f6a7 438 SUPERFAMILY SSF53067 200 264 9.91E-32 T 19-04-2016 APA12_RS06725 8353618c18ebbdfdd42b177d1c92f6a7 438 Pfam PF00012 Hsp70 protein 170 253 1.4E-4 T 19-04-2016 IPR013126 Heat shock protein 70 family APA12_RS06725 8353618c18ebbdfdd42b177d1c92f6a7 438 Pfam PF00012 Hsp70 protein 321 418 6.5E-12 T 19-04-2016 IPR013126 Heat shock protein 70 family APA12_RS06725 8353618c18ebbdfdd42b177d1c92f6a7 438 SUPERFAMILY SSF53067 22 196 4.88E-17 T 19-04-2016 APA12_RS06725 8353618c18ebbdfdd42b177d1c92f6a7 438 Gene3D G3DSA:3.90.640.10 319 369 7.9E-6 T 19-04-2016 APA12_RS06725 8353618c18ebbdfdd42b177d1c92f6a7 438 PANTHER PTHR19375:SF182 21 256 3.6E-71 T 19-04-2016 APA12_RS06725 8353618c18ebbdfdd42b177d1c92f6a7 438 PANTHER PTHR19375:SF182 311 435 3.6E-71 T 19-04-2016 APA12_RS12930 6043624f96d9e529062414bd611622c9 337 Gene3D G3DSA:1.20.272.20 219 317 1.4E-5 T 19-04-2016 APA12_RS12930 6043624f96d9e529062414bd611622c9 337 Gene3D G3DSA:3.40.50.300 1 116 3.3E-7 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS12930 6043624f96d9e529062414bd611622c9 337 PANTHER PTHR34388 1 337 3.3E-41 T 19-04-2016 APA12_RS12930 6043624f96d9e529062414bd611622c9 337 Pfam PF06144 DNA polymerase III, delta subunit 22 183 2.8E-14 T 19-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 APA12_RS12930 6043624f96d9e529062414bd611622c9 337 Gene3D G3DSA:1.10.8.60 137 218 1.8E-11 T 19-04-2016 APA12_RS12930 6043624f96d9e529062414bd611622c9 337 SUPERFAMILY SSF48019 214 322 5.95E-15 T 19-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 APA12_RS12930 6043624f96d9e529062414bd611622c9 337 SUPERFAMILY SSF52540 1 202 1.99E-17 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS12930 6043624f96d9e529062414bd611622c9 337 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 20 316 3.4E-48 T 19-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 APA12_RS07220 b014ddb1ba796c814d9fd77890e02fb2 245 Pfam PF01863 Protein of unknown function DUF45 29 236 3.9E-55 T 19-04-2016 IPR002725 Protein of unknown function DUF45 APA12_RS07220 b014ddb1ba796c814d9fd77890e02fb2 245 PANTHER PTHR30399 7 242 1.1E-39 T 19-04-2016 APA12_RS01530 78ea8e91cd47765c79df4a78aa7e450f 548 PANTHER PTHR23088:SF29 313 542 4.6E-50 T 19-04-2016 APA12_RS01530 78ea8e91cd47765c79df4a78aa7e450f 548 PANTHER PTHR23088:SF29 242 297 4.6E-50 T 19-04-2016 APA12_RS01530 78ea8e91cd47765c79df4a78aa7e450f 548 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 24 534 17.329 T 19-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 APA12_RS01530 78ea8e91cd47765c79df4a78aa7e450f 548 Gene3D G3DSA:3.60.110.10 308 515 2.5E-19 T 19-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APA12_RS01530 78ea8e91cd47765c79df4a78aa7e450f 548 PANTHER PTHR23088 242 297 4.6E-50 T 19-04-2016 APA12_RS01530 78ea8e91cd47765c79df4a78aa7e450f 548 PANTHER PTHR23088 313 542 4.6E-50 T 19-04-2016 APA12_RS01530 78ea8e91cd47765c79df4a78aa7e450f 548 Pfam PF00795 Carbon-nitrogen hydrolase 315 517 3.5E-19 T 19-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APA12_RS01530 78ea8e91cd47765c79df4a78aa7e450f 548 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 76 496 4.4E-67 T 19-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 APA12_RS01530 78ea8e91cd47765c79df4a78aa7e450f 548 SUPERFAMILY SSF56317 313 525 5.89E-32 T 19-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APA12_RS00095 1cc9dff3c190a762f9af20c39288933c 422 SUPERFAMILY SSF51246 325 422 8.89E-31 T 19-04-2016 IPR011054 Rudiment single hybrid motif APA12_RS00095 1cc9dff3c190a762f9af20c39288933c 422 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 293 3.6E-70 T 19-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APA12_RS00095 1cc9dff3c190a762f9af20c39288933c 422 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 1.0E-31 T 19-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APA12_RS00095 1cc9dff3c190a762f9af20c39288933c 422 SUPERFAMILY SSF56059 102 317 1.2E-51 T 19-04-2016 APA12_RS00095 1cc9dff3c190a762f9af20c39288933c 422 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 422 39.301 T 19-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APA12_RS00095 1cc9dff3c190a762f9af20c39288933c 422 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 287 294 - T 19-04-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APA12_RS00095 1cc9dff3c190a762f9af20c39288933c 422 Gene3D G3DSA:3.40.50.20 2 93 9.4E-32 T 19-04-2016 IPR016185 Pre-ATP-grasp domain APA12_RS00095 1cc9dff3c190a762f9af20c39288933c 422 Gene3D G3DSA:3.90.600.10 327 421 2.3E-35 T 19-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APA12_RS00095 1cc9dff3c190a762f9af20c39288933c 422 Gene3D G3DSA:3.30.1490.20 121 188 1.3E-28 T 19-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APA12_RS00095 1cc9dff3c190a762f9af20c39288933c 422 SMART SM01210 327 422 2.1E-53 T 19-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APA12_RS00095 1cc9dff3c190a762f9af20c39288933c 422 SUPERFAMILY SSF52440 1 101 1.73E-31 T 19-04-2016 IPR016185 Pre-ATP-grasp domain APA12_RS00095 1cc9dff3c190a762f9af20c39288933c 422 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 328 420 3.3E-29 T 19-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APA12_RS00095 1cc9dff3c190a762f9af20c39288933c 422 SMART SM01209 101 293 3.6E-117 T 19-04-2016 APA12_RS00095 1cc9dff3c190a762f9af20c39288933c 422 PANTHER PTHR10520 1 422 7.3E-225 T 19-04-2016 APA12_RS00095 1cc9dff3c190a762f9af20c39288933c 422 Gene3D G3DSA:3.30.470.20 190 325 7.7E-50 T 19-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APA12_RS00095 1cc9dff3c190a762f9af20c39288933c 422 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 422 3.0E-148 T 19-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APA12_RS09905 480175b1c973ea2d411410e751b2f5c8 118 PANTHER PTHR11803:SF17 15 115 8.3E-33 T 19-04-2016 APA12_RS09905 480175b1c973ea2d411410e751b2f5c8 118 PANTHER PTHR11803 15 115 8.3E-33 T 19-04-2016 IPR006175 YjgF/YER057c/UK114 family APA12_RS09905 480175b1c973ea2d411410e751b2f5c8 118 Gene3D G3DSA:3.30.1330.40 9 114 5.4E-24 T 19-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APA12_RS09905 480175b1c973ea2d411410e751b2f5c8 118 Pfam PF01042 Endoribonuclease L-PSP 4 114 9.6E-26 T 19-04-2016 IPR006175 YjgF/YER057c/UK114 family APA12_RS09905 480175b1c973ea2d411410e751b2f5c8 118 SUPERFAMILY SSF55298 7 116 1.51E-29 T 19-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APA12_RS13155 ba9c73bf5d8712ce2b561eb8192b2a6d 168 Pfam PF00849 RNA pseudouridylate synthase 1 107 3.5E-22 T 19-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APA12_RS13155 ba9c73bf5d8712ce2b561eb8192b2a6d 168 PANTHER PTHR11079 5 168 5.2E-36 T 19-04-2016 APA12_RS13155 ba9c73bf5d8712ce2b561eb8192b2a6d 168 SUPERFAMILY SSF55120 1 160 5.76E-40 T 19-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APA12_RS01075 c7b97f900eb44cba465d5db2f7dddefe 167 SUPERFAMILY SSF55729 7 152 7.44E-24 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase APA12_RS01075 c7b97f900eb44cba465d5db2f7dddefe 167 PANTHER PTHR13256:SF34 6 149 3.0E-16 T 19-04-2016 APA12_RS01075 c7b97f900eb44cba465d5db2f7dddefe 167 PANTHER PTHR13256 6 149 3.0E-16 T 19-04-2016 APA12_RS01075 c7b97f900eb44cba465d5db2f7dddefe 167 Gene3D G3DSA:3.40.630.30 6 161 1.8E-28 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase APA12_RS01075 c7b97f900eb44cba465d5db2f7dddefe 167 Pfam PF13302 Acetyltransferase (GNAT) domain 10 145 4.6E-17 T 19-04-2016 IPR000182 GNAT domain GO:0008080 APA12_RS09775 c12d4d199675bf9c91b8d00d168a6ce0 339 SUPERFAMILY SSF48179 184 333 2.21E-71 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APA12_RS09775 c12d4d199675bf9c91b8d00d168a6ce0 339 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 327 1.6E-124 T 19-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APA12_RS09775 c12d4d199675bf9c91b8d00d168a6ce0 339 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 184 327 6.5E-65 T 19-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APA12_RS09775 c12d4d199675bf9c91b8d00d168a6ce0 339 PANTHER PTHR21371 1 338 1.4E-180 T 19-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APA12_RS09775 c12d4d199675bf9c91b8d00d168a6ce0 339 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 1 329 44.689 T 19-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APA12_RS09775 c12d4d199675bf9c91b8d00d168a6ce0 339 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 178 2.3E-72 T 19-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APA12_RS09775 c12d4d199675bf9c91b8d00d168a6ce0 339 SUPERFAMILY SSF51735 1 183 9.56E-72 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS09775 c12d4d199675bf9c91b8d00d168a6ce0 339 Gene3D G3DSA:1.10.1040.10 29 326 4.3E-112 T 19-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APA12_RS08390 2eba5e38280208299b7628c7e2bf81d4 432 SUPERFAMILY SSF53335 60 420 2.82E-44 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS08390 2eba5e38280208299b7628c7e2bf81d4 432 PANTHER PTHR11061 3 425 1.5E-50 T 19-04-2016 APA12_RS08390 2eba5e38280208299b7628c7e2bf81d4 432 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 348 416 2.1E-8 T 19-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 APA12_RS08390 2eba5e38280208299b7628c7e2bf81d4 432 Gene3D G3DSA:2.40.50.140 3 72 4.0E-8 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS08390 2eba5e38280208299b7628c7e2bf81d4 432 PANTHER PTHR11061:SF30 3 425 1.5E-50 T 19-04-2016 APA12_RS08390 2eba5e38280208299b7628c7e2bf81d4 432 Gene3D G3DSA:3.40.50.150 239 420 4.0E-26 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS12165 df88681dbc97a9c4e330eba6c30f7391 107 Pfam PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system 26 98 9.1E-28 T 19-04-2016 IPR018669 Toxin-antitoxin system, toxin component, HigB, putative GO:0016788 APA12_RS10725 05fe3e183faf70bac5f01b281a560c89 112 Pfam PF00893 Small Multidrug Resistance protein 7 96 2.9E-24 T 19-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 APA12_RS10725 05fe3e183faf70bac5f01b281a560c89 112 PANTHER PTHR30561 4 112 2.3E-41 T 19-04-2016 APA12_RS10725 05fe3e183faf70bac5f01b281a560c89 112 PANTHER PTHR30561:SF1 4 112 2.3E-41 T 19-04-2016 APA12_RS10725 05fe3e183faf70bac5f01b281a560c89 112 SUPERFAMILY SSF103481 7 108 5.89E-19 T 19-04-2016 APA12_RS12895 510dc17f9e85c9bfa4f060abe9fb03e6 357 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 19-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 APA12_RS12895 510dc17f9e85c9bfa4f060abe9fb03e6 357 Gene3D G3DSA:1.10.340.30 27 122 5.3E-40 T 19-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APA12_RS12895 510dc17f9e85c9bfa4f060abe9fb03e6 357 Gene3D G3DSA:3.90.79.10 233 347 8.1E-16 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APA12_RS12895 510dc17f9e85c9bfa4f060abe9fb03e6 357 SMART SM00478 41 192 1.3E-40 T 19-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 APA12_RS12895 510dc17f9e85c9bfa4f060abe9fb03e6 357 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 38 160 5.4E-21 T 19-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 APA12_RS12895 510dc17f9e85c9bfa4f060abe9fb03e6 357 SUPERFAMILY SSF55811 222 347 9.53E-20 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APA12_RS12895 510dc17f9e85c9bfa4f060abe9fb03e6 357 PANTHER PTHR10359 8 311 1.3E-81 T 19-04-2016 APA12_RS12895 510dc17f9e85c9bfa4f060abe9fb03e6 357 Gene3D G3DSA:1.10.1670.10 123 225 2.1E-32 T 19-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal APA12_RS12895 510dc17f9e85c9bfa4f060abe9fb03e6 357 SUPERFAMILY SSF48150 7 224 3.14E-64 T 19-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APA12_RS12895 510dc17f9e85c9bfa4f060abe9fb03e6 357 Pfam PF14815 NUDIX domain 237 346 4.4E-21 T 19-04-2016 IPR029119 MutY, C-terminal APA12_RS07565 41f46fd5b7ea6c38d4d55fc08d1dccf8 408 PANTHER PTHR30544 47 401 7.9E-162 T 19-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APA12_RS07565 41f46fd5b7ea6c38d4d55fc08d1dccf8 408 PANTHER PTHR30544:SF5 47 401 7.9E-162 T 19-04-2016 APA12_RS07565 41f46fd5b7ea6c38d4d55fc08d1dccf8 408 SUPERFAMILY SSF102114 142 359 1.44E-12 T 19-04-2016 APA12_RS07565 41f46fd5b7ea6c38d4d55fc08d1dccf8 408 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 47 398 73.407 T 19-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APA12_RS07565 41f46fd5b7ea6c38d4d55fc08d1dccf8 408 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 46 398 5.4E-122 T 19-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APA12_RS07565 41f46fd5b7ea6c38d4d55fc08d1dccf8 408 Gene3D G3DSA:3.20.20.70 149 384 1.0E-12 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS07565 41f46fd5b7ea6c38d4d55fc08d1dccf8 408 PIRSF PIRSF006004 40 407 1.7E-137 T 19-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APA12_RS07565 41f46fd5b7ea6c38d4d55fc08d1dccf8 408 Pfam PF04055 Radical SAM superfamily 153 327 1.5E-14 T 19-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APA12_RS07125 752cce7b57f66e2eab81e19bff25f675 438 Gene3D G3DSA:3.20.20.30 341 426 6.7E-124 T 19-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APA12_RS07125 752cce7b57f66e2eab81e19bff25f675 438 Gene3D G3DSA:3.20.20.30 3 304 6.7E-124 T 19-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APA12_RS07125 752cce7b57f66e2eab81e19bff25f675 438 PANTHER PTHR30011:SF16 1 426 3.7E-226 T 19-04-2016 APA12_RS07125 752cce7b57f66e2eab81e19bff25f675 438 PIRSF PIRSF000337 1 436 3.7E-133 T 19-04-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 APA12_RS07125 752cce7b57f66e2eab81e19bff25f675 438 Pfam PF00296 Luciferase-like monooxygenase 12 381 6.4E-51 T 19-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APA12_RS07125 752cce7b57f66e2eab81e19bff25f675 438 PANTHER PTHR30011 1 426 3.7E-226 T 19-04-2016 APA12_RS07125 752cce7b57f66e2eab81e19bff25f675 438 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 2 423 1.6E-167 T 19-04-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 APA12_RS07125 752cce7b57f66e2eab81e19bff25f675 438 SUPERFAMILY SSF51679 6 426 1.65E-119 T 19-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APA12_RS03010 c39f58f4b1798a466d418709dc7aeeee 388 Pfam PF00561 alpha/beta hydrolase fold 137 247 2.9E-20 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APA12_RS03010 c39f58f4b1798a466d418709dc7aeeee 388 PRINTS PR00111 Alpha/beta hydrolase fold signature 219 232 1.42E-13 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APA12_RS03010 c39f58f4b1798a466d418709dc7aeeee 388 PRINTS PR00111 Alpha/beta hydrolase fold signature 161 176 1.42E-13 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APA12_RS03010 c39f58f4b1798a466d418709dc7aeeee 388 PRINTS PR00111 Alpha/beta hydrolase fold signature 205 218 1.42E-13 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APA12_RS03010 c39f58f4b1798a466d418709dc7aeeee 388 PRINTS PR00111 Alpha/beta hydrolase fold signature 321 335 1.42E-13 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APA12_RS03010 c39f58f4b1798a466d418709dc7aeeee 388 SUPERFAMILY SSF53474 116 373 3.68E-53 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS03010 c39f58f4b1798a466d418709dc7aeeee 388 SUPERFAMILY SSF51230 5 95 5.76E-19 T 19-04-2016 IPR011053 Single hybrid motif APA12_RS03010 c39f58f4b1798a466d418709dc7aeeee 388 Pfam PF00364 Biotin-requiring enzyme 8 78 2.6E-11 T 19-04-2016 IPR000089 Biotin/lipoyl attachment APA12_RS03010 c39f58f4b1798a466d418709dc7aeeee 388 PANTHER PTHR10992 113 374 3.2E-45 T 19-04-2016 APA12_RS03010 c39f58f4b1798a466d418709dc7aeeee 388 Gene3D G3DSA:3.40.50.1820 106 373 1.9E-57 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS03010 c39f58f4b1798a466d418709dc7aeeee 388 Gene3D G3DSA:2.40.50.100 5 88 8.4E-21 T 19-04-2016 APA12_RS11265 b8bca1e5dba8ce284b1b93a555acb040 339 PANTHER PTHR24220:SF150 13 279 7.9E-133 T 19-04-2016 APA12_RS11265 b8bca1e5dba8ce284b1b93a555acb040 339 Pfam PF08402 TOBE domain 258 334 4.1E-9 T 19-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 APA12_RS11265 b8bca1e5dba8ce284b1b93a555acb040 339 Gene3D G3DSA:3.40.50.300 4 245 1.9E-77 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS11265 b8bca1e5dba8ce284b1b93a555acb040 339 SMART SM00382 37 220 5.0E-15 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS11265 b8bca1e5dba8ce284b1b93a555acb040 339 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APA12_RS11265 b8bca1e5dba8ce284b1b93a555acb040 339 PANTHER PTHR24220 13 279 7.9E-133 T 19-04-2016 APA12_RS11265 b8bca1e5dba8ce284b1b93a555acb040 339 SUPERFAMILY SSF50331 254 335 1.39E-9 T 19-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APA12_RS11265 b8bca1e5dba8ce284b1b93a555acb040 339 Pfam PF00005 ABC transporter 28 170 2.9E-32 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS11265 b8bca1e5dba8ce284b1b93a555acb040 339 SUPERFAMILY SSF52540 12 249 1.12E-83 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS04625 704533ffe75551f4c79fbe65ba9cba63 422 PANTHER PTHR30563 35 402 1.0E-56 T 19-04-2016 APA12_RS04625 704533ffe75551f4c79fbe65ba9cba63 422 Pfam PF02646 RmuC family 115 399 3.1E-60 T 19-04-2016 IPR003798 DNA recombination RmuC APA12_RS10460 cc6b6e901c14181cb94a3e505ea7ffa0 133 PANTHER PTHR34309 3 133 2.4E-22 T 19-04-2016 APA12_RS10460 cc6b6e901c14181cb94a3e505ea7ffa0 133 Pfam PF03928 Haem-degrading 2 127 1.6E-27 T 19-04-2016 IPR005624 Haem-degrading APA12_RS10460 cc6b6e901c14181cb94a3e505ea7ffa0 133 SUPERFAMILY SSF143744 2 129 8.24E-31 T 19-04-2016 APA12_RS10460 cc6b6e901c14181cb94a3e505ea7ffa0 133 PANTHER PTHR34309:SF1 3 133 2.4E-22 T 19-04-2016 APA12_RS00825 cf8d249387e01075d5bf1692da1b12c4 341 Pfam PF14281 PD-(D/E)XK nuclease superfamily 13 132 1.7E-6 T 19-04-2016 IPR029470 PD-(D/E)XK nuclease superfamily 4 APA12_RS12440 e27c64be1e8b62760bed2604c0e2ab26 1168 Gene3D G3DSA:3.40.50.280 723 867 6.9E-48 T 19-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 APA12_RS12440 e27c64be1e8b62760bed2604c0e2ab26 1168 TIGRFAM TIGR02082 metH: methionine synthase 12 1168 0.0 T 19-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 APA12_RS12440 e27c64be1e8b62760bed2604c0e2ab26 1168 SUPERFAMILY SSF51717 348 615 8.5E-72 T 19-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 APA12_RS12440 e27c64be1e8b62760bed2604c0e2ab26 1168 SUPERFAMILY SSF52242 722 852 4.45E-37 T 19-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 APA12_RS12440 e27c64be1e8b62760bed2604c0e2ab26 1168 SUPERFAMILY SSF82282 6 389 3.79E-98 T 19-04-2016 IPR003726 Homocysteine-binding domain APA12_RS12440 e27c64be1e8b62760bed2604c0e2ab26 1168 SUPERFAMILY SSF56507 893 1168 4.58E-86 T 19-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 APA12_RS12440 e27c64be1e8b62760bed2604c0e2ab26 1168 PANTHER PTHR21091 7 382 1.7E-98 T 19-04-2016 APA12_RS12440 e27c64be1e8b62760bed2604c0e2ab26 1168 Pfam PF02574 Homocysteine S-methyltransferase 16 304 7.8E-67 T 19-04-2016 IPR003726 Homocysteine-binding domain APA12_RS12440 e27c64be1e8b62760bed2604c0e2ab26 1168 SUPERFAMILY SSF47644 637 717 6.93E-25 T 19-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain APA12_RS12440 e27c64be1e8b62760bed2604c0e2ab26 1168 Gene3D G3DSA:3.20.20.20 355 614 5.8E-80 T 19-04-2016 IPR000489 Pterin-binding domain GO:0042558 APA12_RS12440 e27c64be1e8b62760bed2604c0e2ab26 1168 Pfam PF02310 B12 binding domain 726 823 5.6E-20 T 19-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 APA12_RS12440 e27c64be1e8b62760bed2604c0e2ab26 1168 PANTHER PTHR21091:SF97 7 382 1.7E-98 T 19-04-2016 APA12_RS12440 e27c64be1e8b62760bed2604c0e2ab26 1168 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 964 1168 9.1E-39 T 19-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 APA12_RS12440 e27c64be1e8b62760bed2604c0e2ab26 1168 Gene3D G3DSA:1.10.1240.10 635 717 4.9E-33 T 19-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain APA12_RS12440 e27c64be1e8b62760bed2604c0e2ab26 1168 Pfam PF02607 B12 binding domain 641 713 1.3E-28 T 19-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain APA12_RS12440 e27c64be1e8b62760bed2604c0e2ab26 1168 SMART SM01018 638 720 5.2E-42 T 19-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain APA12_RS12440 e27c64be1e8b62760bed2604c0e2ab26 1168 PIRSF PIRSF000381 1 1168 0.0 T 19-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 APA12_RS12440 e27c64be1e8b62760bed2604c0e2ab26 1168 Pfam PF00809 Pterin binding enzyme 350 583 6.2E-38 T 19-04-2016 IPR000489 Pterin-binding domain GO:0042558 APA12_RS12440 e27c64be1e8b62760bed2604c0e2ab26 1168 Gene3D G3DSA:3.10.196.10 955 1168 7.0E-61 T 19-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 APA12_RS12440 e27c64be1e8b62760bed2604c0e2ab26 1168 Gene3D G3DSA:3.20.20.330 3 354 2.1E-101 T 19-04-2016 IPR003726 Homocysteine-binding domain APA12_RS02505 6367ba99bedef4423e4b7ca543d69133 288 PANTHER PTHR14194 3 284 2.0E-34 T 19-04-2016 APA12_RS02505 6367ba99bedef4423e4b7ca543d69133 288 SUPERFAMILY SSF51735 3 240 1.54E-35 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS02505 6367ba99bedef4423e4b7ca543d69133 288 Pfam PF05368 NmrA-like family 3 224 4.7E-15 T 19-04-2016 IPR008030 NmrA-like domain APA12_RS02505 6367ba99bedef4423e4b7ca543d69133 288 Gene3D G3DSA:3.40.50.720 3 224 2.6E-27 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS09820 cd6e217d102f8840778bb93f9435d3ae 402 SUPERFAMILY SSF53756 104 389 3.3E-30 T 19-04-2016 APA12_RS09820 cd6e217d102f8840778bb93f9435d3ae 402 Pfam PF00534 Glycosyl transferases group 1 208 325 2.9E-12 T 19-04-2016 IPR001296 Glycosyl transferase, family 1 APA12_RS09820 cd6e217d102f8840778bb93f9435d3ae 402 PANTHER PTHR12526 351 388 2.2E-22 T 19-04-2016 APA12_RS09820 cd6e217d102f8840778bb93f9435d3ae 402 PANTHER PTHR12526 150 328 2.2E-22 T 19-04-2016 APA12_RS09820 cd6e217d102f8840778bb93f9435d3ae 402 Gene3D G3DSA:3.40.50.2000 192 380 2.1E-10 T 19-04-2016 APA12_RS09280 6c43c0dbc2674b1daeadbfee9e089580 120 PRINTS PR01853 Bacterial YajC preprotein translocase signature 23 43 2.1E-14 T 19-04-2016 IPR003849 Preprotein translocase YajC APA12_RS09280 6c43c0dbc2674b1daeadbfee9e089580 120 PRINTS PR01853 Bacterial YajC preprotein translocase signature 61 79 2.1E-14 T 19-04-2016 IPR003849 Preprotein translocase YajC APA12_RS09280 6c43c0dbc2674b1daeadbfee9e089580 120 SMART SM01323 21 105 7.0E-41 T 19-04-2016 IPR003849 Preprotein translocase YajC APA12_RS09280 6c43c0dbc2674b1daeadbfee9e089580 120 Pfam PF02699 Preprotein translocase subunit 24 102 4.1E-26 T 19-04-2016 IPR003849 Preprotein translocase YajC APA12_RS09280 6c43c0dbc2674b1daeadbfee9e089580 120 PANTHER PTHR33909:SF1 1 105 1.9E-24 T 19-04-2016 APA12_RS09280 6c43c0dbc2674b1daeadbfee9e089580 120 PANTHER PTHR33909 1 105 1.9E-24 T 19-04-2016 APA12_RS09280 6c43c0dbc2674b1daeadbfee9e089580 120 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 22 105 1.3E-24 T 19-04-2016 IPR003849 Preprotein translocase YajC APA12_RS09795 d8b2668204db46c31c490322f752c989 296 Gene3D G3DSA:1.10.150.210 93 143 7.5E-23 T 19-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 APA12_RS09795 d8b2668204db46c31c490322f752c989 296 Gene3D G3DSA:3.40.50.1000 144 275 9.2E-32 T 19-04-2016 IPR023214 HAD-like domain APA12_RS09795 d8b2668204db46c31c490322f752c989 296 Pfam PF12710 haloacid dehalogenase-like hydrolase 84 252 4.4E-16 T 19-04-2016 APA12_RS09795 d8b2668204db46c31c490322f752c989 296 PANTHER PTHR10000:SF7 78 284 3.4E-66 T 19-04-2016 APA12_RS09795 d8b2668204db46c31c490322f752c989 296 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 74 281 4.8E-61 T 19-04-2016 APA12_RS09795 d8b2668204db46c31c490322f752c989 296 SUPERFAMILY SSF56784 80 287 8.81E-42 T 19-04-2016 IPR023214 HAD-like domain APA12_RS09795 d8b2668204db46c31c490322f752c989 296 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 82 253 3.4E-29 T 19-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 APA12_RS09795 d8b2668204db46c31c490322f752c989 296 PANTHER PTHR10000 78 284 3.4E-66 T 19-04-2016 APA12_RS00710 d657c42f678e2dc6ae5ccfbdd33a7fc3 396 PANTHER PTHR30158:SF3 1 391 8.0E-146 T 19-04-2016 APA12_RS00710 d657c42f678e2dc6ae5ccfbdd33a7fc3 396 SUPERFAMILY SSF111369 50 298 2.62E-77 T 19-04-2016 APA12_RS00710 d657c42f678e2dc6ae5ccfbdd33a7fc3 396 Gene3D G3DSA:2.40.50.100 170 203 3.7E-21 T 19-04-2016 APA12_RS00710 d657c42f678e2dc6ae5ccfbdd33a7fc3 396 Gene3D G3DSA:2.40.50.100 62 95 3.7E-21 T 19-04-2016 APA12_RS00710 d657c42f678e2dc6ae5ccfbdd33a7fc3 396 Pfam PF00529 HlyD membrane-fusion protein of T1SS 263 358 2.6E-8 T 19-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APA12_RS00710 d657c42f678e2dc6ae5ccfbdd33a7fc3 396 PANTHER PTHR30158 1 391 8.0E-146 T 19-04-2016 APA12_RS00710 d657c42f678e2dc6ae5ccfbdd33a7fc3 396 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 291 1.5E-10 T 19-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APA12_RS00710 d657c42f678e2dc6ae5ccfbdd33a7fc3 396 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 372 1.0E-82 T 19-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APA12_RS05850 62256ec2afd2961be178ecd3d83dd28e 336 SUPERFAMILY SSF102114 21 326 2.88E-86 T 19-04-2016 APA12_RS05850 62256ec2afd2961be178ecd3d83dd28e 336 SMART SM00876 236 328 2.2E-44 T 19-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 APA12_RS05850 62256ec2afd2961be178ecd3d83dd28e 336 Pfam PF04055 Radical SAM superfamily 66 219 3.2E-15 T 19-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APA12_RS05850 62256ec2afd2961be178ecd3d83dd28e 336 TIGRFAM TIGR00433 bioB: biotin synthase 31 326 3.1E-122 T 19-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 APA12_RS05850 62256ec2afd2961be178ecd3d83dd28e 336 SMART SM00729 59 271 7.0E-39 T 19-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APA12_RS05850 62256ec2afd2961be178ecd3d83dd28e 336 PANTHER PTHR22976:SF19 20 326 1.9E-163 T 19-04-2016 APA12_RS05850 62256ec2afd2961be178ecd3d83dd28e 336 PANTHER PTHR22976 20 326 1.9E-163 T 19-04-2016 APA12_RS05850 62256ec2afd2961be178ecd3d83dd28e 336 PIRSF PIRSF001619 8 331 1.8E-132 T 19-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 APA12_RS05850 62256ec2afd2961be178ecd3d83dd28e 336 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 236 326 7.9E-20 T 19-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 APA12_RS05850 62256ec2afd2961be178ecd3d83dd28e 336 Hamap MF_01694 Biotin synthase [bioB]. 21 329 41.322 T 19-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 APA12_RS05850 62256ec2afd2961be178ecd3d83dd28e 336 Gene3D G3DSA:3.20.20.70 21 327 3.8E-99 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS14340 8386599caa6129447df21d40e3456b49 359 Pfam PF00873 AcrB/AcrD/AcrF family 1 359 4.6E-126 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS14340 8386599caa6129447df21d40e3456b49 359 Gene3D G3DSA:3.30.70.1320 88 130 9.3E-31 T 19-04-2016 APA12_RS14340 8386599caa6129447df21d40e3456b49 359 Gene3D G3DSA:3.30.70.1320 227 279 9.3E-31 T 19-04-2016 APA12_RS14340 8386599caa6129447df21d40e3456b49 359 PANTHER PTHR32063 1 359 1.6E-194 T 19-04-2016 APA12_RS14340 8386599caa6129447df21d40e3456b49 359 Gene3D G3DSA:3.30.70.1430 1 87 3.8E-25 T 19-04-2016 APA12_RS14340 8386599caa6129447df21d40e3456b49 359 PRINTS PR00702 Acriflavin resistance protein family signature 287 310 8.0E-33 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS14340 8386599caa6129447df21d40e3456b49 359 PRINTS PR00702 Acriflavin resistance protein family signature 342 359 8.0E-33 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS14340 8386599caa6129447df21d40e3456b49 359 PRINTS PR00702 Acriflavin resistance protein family signature 314 335 8.0E-33 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS14340 8386599caa6129447df21d40e3456b49 359 SUPERFAMILY SSF82693 225 280 1.1E-21 T 19-04-2016 APA12_RS14340 8386599caa6129447df21d40e3456b49 359 SUPERFAMILY SSF82693 86 133 1.1E-21 T 19-04-2016 APA12_RS14340 8386599caa6129447df21d40e3456b49 359 SUPERFAMILY SSF82866 247 359 1.19E-22 T 19-04-2016 APA12_RS14340 8386599caa6129447df21d40e3456b49 359 PANTHER PTHR32063:SF13 1 359 1.6E-194 T 19-04-2016 APA12_RS14340 8386599caa6129447df21d40e3456b49 359 SUPERFAMILY SSF82693 1 78 6.28E-18 T 19-04-2016 APA12_RS14340 8386599caa6129447df21d40e3456b49 359 Gene3D G3DSA:3.30.2090.10 132 225 3.8E-24 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APA12_RS14340 8386599caa6129447df21d40e3456b49 359 SUPERFAMILY SSF82714 133 223 2.22E-21 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APA12_RS00300 0ede6986843b601b3f0674575c2d8c5b 572 PANTHER PTHR10724 15 526 1.8E-227 T 19-04-2016 APA12_RS00300 0ede6986843b601b3f0674575c2d8c5b 572 Pfam PF00575 S1 RNA binding domain 203 272 3.6E-19 T 19-04-2016 IPR003029 S1 domain GO:0003676 APA12_RS00300 0ede6986843b601b3f0674575c2d8c5b 572 Pfam PF00575 S1 RNA binding domain 372 446 6.4E-18 T 19-04-2016 IPR003029 S1 domain GO:0003676 APA12_RS00300 0ede6986843b601b3f0674575c2d8c5b 572 Pfam PF00575 S1 RNA binding domain 287 359 4.9E-20 T 19-04-2016 IPR003029 S1 domain GO:0003676 APA12_RS00300 0ede6986843b601b3f0674575c2d8c5b 572 Pfam PF00575 S1 RNA binding domain 32 98 1.4E-6 T 19-04-2016 IPR003029 S1 domain GO:0003676 APA12_RS00300 0ede6986843b601b3f0674575c2d8c5b 572 Pfam PF00575 S1 RNA binding domain 115 183 9.5E-10 T 19-04-2016 IPR003029 S1 domain GO:0003676 APA12_RS00300 0ede6986843b601b3f0674575c2d8c5b 572 Pfam PF00575 S1 RNA binding domain 460 532 1.6E-12 T 19-04-2016 IPR003029 S1 domain GO:0003676 APA12_RS00300 0ede6986843b601b3f0674575c2d8c5b 572 SUPERFAMILY SSF50249 202 287 1.96E-25 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS00300 0ede6986843b601b3f0674575c2d8c5b 572 SUPERFAMILY SSF50249 354 459 2.31E-24 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS00300 0ede6986843b601b3f0674575c2d8c5b 572 SMART SM00316 287 359 9.4E-25 T 19-04-2016 IPR022967 RNA-binding domain, S1 APA12_RS00300 0ede6986843b601b3f0674575c2d8c5b 572 SMART SM00316 374 446 1.3E-21 T 19-04-2016 IPR022967 RNA-binding domain, S1 APA12_RS00300 0ede6986843b601b3f0674575c2d8c5b 572 SMART SM00316 461 532 6.7E-16 T 19-04-2016 IPR022967 RNA-binding domain, S1 APA12_RS00300 0ede6986843b601b3f0674575c2d8c5b 572 SMART SM00316 31 99 7.1E-12 T 19-04-2016 IPR022967 RNA-binding domain, S1 APA12_RS00300 0ede6986843b601b3f0674575c2d8c5b 572 SMART SM00316 202 272 2.1E-27 T 19-04-2016 IPR022967 RNA-binding domain, S1 APA12_RS00300 0ede6986843b601b3f0674575c2d8c5b 572 SMART SM00316 115 183 1.2E-4 T 19-04-2016 IPR022967 RNA-binding domain, S1 APA12_RS00300 0ede6986843b601b3f0674575c2d8c5b 572 Gene3D G3DSA:2.40.50.140 371 451 1.1E-26 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS00300 0ede6986843b601b3f0674575c2d8c5b 572 SUPERFAMILY SSF50249 444 546 4.48E-17 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS00300 0ede6986843b601b3f0674575c2d8c5b 572 SUPERFAMILY SSF50249 270 383 2.31E-28 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS00300 0ede6986843b601b3f0674575c2d8c5b 572 Gene3D G3DSA:2.40.50.140 204 288 8.0E-29 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS00300 0ede6986843b601b3f0674575c2d8c5b 572 Gene3D G3DSA:2.40.50.140 290 370 1.3E-28 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS00300 0ede6986843b601b3f0674575c2d8c5b 572 Gene3D G3DSA:2.40.50.140 33 111 5.3E-14 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS00300 0ede6986843b601b3f0674575c2d8c5b 572 SUPERFAMILY SSF50249 115 197 1.81E-12 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS00300 0ede6986843b601b3f0674575c2d8c5b 572 SUPERFAMILY SSF50249 22 124 2.31E-19 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS00300 0ede6986843b601b3f0674575c2d8c5b 572 PANTHER PTHR10724:SF6 15 526 1.8E-227 T 19-04-2016 APA12_RS00300 0ede6986843b601b3f0674575c2d8c5b 572 Gene3D G3DSA:2.40.50.140 456 532 1.7E-16 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS00300 0ede6986843b601b3f0674575c2d8c5b 572 PIRSF PIRSF002111 1 546 5.1E-202 T 19-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APA12_RS00300 0ede6986843b601b3f0674575c2d8c5b 572 PRINTS PR00681 Ribosomal protein S1 signature 33 51 3.1E-83 T 19-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APA12_RS00300 0ede6986843b601b3f0674575c2d8c5b 572 PRINTS PR00681 Ribosomal protein S1 signature 167 187 3.1E-83 T 19-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APA12_RS00300 0ede6986843b601b3f0674575c2d8c5b 572 PRINTS PR00681 Ribosomal protein S1 signature 342 360 3.1E-83 T 19-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APA12_RS00300 0ede6986843b601b3f0674575c2d8c5b 572 PRINTS PR00681 Ribosomal protein S1 signature 138 155 3.1E-83 T 19-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APA12_RS00300 0ede6986843b601b3f0674575c2d8c5b 572 PRINTS PR00681 Ribosomal protein S1 signature 51 65 3.1E-83 T 19-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APA12_RS00300 0ede6986843b601b3f0674575c2d8c5b 572 PRINTS PR00681 Ribosomal protein S1 signature 96 115 3.1E-83 T 19-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APA12_RS00300 0ede6986843b601b3f0674575c2d8c5b 572 PRINTS PR00681 Ribosomal protein S1 signature 302 321 3.1E-83 T 19-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APA12_RS00300 0ede6986843b601b3f0674575c2d8c5b 572 PRINTS PR00681 Ribosomal protein S1 signature 120 136 3.1E-83 T 19-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APA12_RS00300 0ede6986843b601b3f0674575c2d8c5b 572 PRINTS PR00681 Ribosomal protein S1 signature 224 245 3.1E-83 T 19-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APA12_RS00300 0ede6986843b601b3f0674575c2d8c5b 572 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 15 532 2.4E-198 T 19-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APA12_RS00300 0ede6986843b601b3f0674575c2d8c5b 572 Gene3D G3DSA:2.40.50.140 112 185 8.1E-12 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS12510 b6ac4d3d7dab2a13b75351219a4e1442 100 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 42 93 1.2E-13 T 19-04-2016 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter APA12_RS12510 b6ac4d3d7dab2a13b75351219a4e1442 100 PIRSF PIRSF032126 1 100 9.3E-20 T 19-04-2016 IPR016989 ATP synthase protein I, alphaproteobacterial APA12_RS05570 ef3d8b1e4f860a396b652e75063e10f0 715 SUPERFAMILY SSF52540 195 464 1.99E-53 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05570 ef3d8b1e4f860a396b652e75063e10f0 715 Gene3D G3DSA:3.40.50.300 272 465 4.8E-51 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05570 ef3d8b1e4f860a396b652e75063e10f0 715 PANTHER PTHR14025 235 652 6.5E-91 T 19-04-2016 APA12_RS05570 ef3d8b1e4f860a396b652e75063e10f0 715 Gene3D G3DSA:2.40.50.140 70 154 3.2E-13 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS05570 ef3d8b1e4f860a396b652e75063e10f0 715 Pfam PF00270 DEAD/DEAH box helicase 312 443 1.9E-15 T 19-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APA12_RS05570 ef3d8b1e4f860a396b652e75063e10f0 715 Gene3D G3DSA:3.40.50.300 466 647 6.6E-37 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05570 ef3d8b1e4f860a396b652e75063e10f0 715 Pfam PF00271 Helicase conserved C-terminal domain 492 598 3.0E-17 T 19-04-2016 IPR001650 Helicase, C-terminal APA12_RS05570 ef3d8b1e4f860a396b652e75063e10f0 715 SMART SM00487 284 471 9.3E-30 T 19-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APA12_RS05570 ef3d8b1e4f860a396b652e75063e10f0 715 SMART SM00490 516 599 1.4E-17 T 19-04-2016 IPR001650 Helicase, C-terminal APA12_RS05570 ef3d8b1e4f860a396b652e75063e10f0 715 PANTHER PTHR14025:SF21 235 652 6.5E-91 T 19-04-2016 APA12_RS05570 ef3d8b1e4f860a396b652e75063e10f0 715 SUPERFAMILY SSF50249 22 190 1.26E-20 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS05570 ef3d8b1e4f860a396b652e75063e10f0 715 Pfam PF17191 RecG wedge domain 33 183 4.5E-5 T 19-04-2016 IPR033454 RecG, wedge domain APA12_RS05570 ef3d8b1e4f860a396b652e75063e10f0 715 SUPERFAMILY SSF52540 404 610 4.28E-35 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS06065 b737918e771419dc28112d67716cbf0f 76 SUPERFAMILY SSF82657 1 76 6.15E-24 T 19-04-2016 IPR002634 BolA protein APA12_RS06065 b737918e771419dc28112d67716cbf0f 76 PANTHER PTHR12735:SF3 5 76 7.7E-15 T 19-04-2016 APA12_RS06065 b737918e771419dc28112d67716cbf0f 76 PANTHER PTHR12735 5 76 7.7E-15 T 19-04-2016 APA12_RS06065 b737918e771419dc28112d67716cbf0f 76 Pfam PF01722 BolA-like protein 27 76 1.6E-15 T 19-04-2016 IPR002634 BolA protein APA12_RS06065 b737918e771419dc28112d67716cbf0f 76 Gene3D G3DSA:3.30.300.90 1 76 3.4E-22 T 19-04-2016 IPR002634 BolA protein APA12_RS06065 b737918e771419dc28112d67716cbf0f 76 PIRSF PIRSF003113 1 76 1.6E-20 T 19-04-2016 IPR002634 BolA protein APA12_RS10815 f696fa6b86ba005a83cfa832ae468cef 337 SUPERFAMILY SSF47240 69 232 1.41E-18 T 19-04-2016 IPR009078 Ferritin-like superfamily APA12_RS10815 f696fa6b86ba005a83cfa832ae468cef 337 Gene3D G3DSA:1.20.1260.10 49 141 1.3E-4 T 19-04-2016 IPR012347 Ferritin-related APA12_RS01985 12690339a3965aca634a743ba37024a5 217 Gene3D G3DSA:1.10.10.640 84 120 7.5E-10 T 19-04-2016 IPR023094 Toluene tolerance protein, alpha-helical APA12_RS01985 12690339a3965aca634a743ba37024a5 217 Gene3D G3DSA:1.10.10.640 182 215 7.5E-10 T 19-04-2016 IPR023094 Toluene tolerance protein, alpha-helical APA12_RS01985 12690339a3965aca634a743ba37024a5 217 Pfam PF05494 MlaC protein 50 208 7.8E-29 T 19-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC APA12_RS01985 12690339a3965aca634a743ba37024a5 217 Gene3D G3DSA:3.10.450.50 36 79 5.3E-7 T 19-04-2016 IPR032710 NTF2-like domain APA12_RS01985 12690339a3965aca634a743ba37024a5 217 Gene3D G3DSA:3.10.450.50 123 176 5.3E-7 T 19-04-2016 IPR032710 NTF2-like domain APA12_RS13270 d6619dceaef1fd347fa4482d08c72c49 160 PRINTS PR01021 OMPA domain signature 59 81 1.4E-14 T 19-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APA12_RS13270 d6619dceaef1fd347fa4482d08c72c49 160 PRINTS PR01021 OMPA domain signature 104 120 1.4E-14 T 19-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APA12_RS13270 d6619dceaef1fd347fa4482d08c72c49 160 PRINTS PR01021 OMPA domain signature 89 104 1.4E-14 T 19-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APA12_RS13270 d6619dceaef1fd347fa4482d08c72c49 160 PANTHER PTHR30128 38 153 2.9E-40 T 19-04-2016 APA12_RS13270 d6619dceaef1fd347fa4482d08c72c49 160 Gene3D G3DSA:3.30.1330.60 52 153 8.6E-32 T 19-04-2016 IPR006665 OmpA-like domain APA12_RS13270 d6619dceaef1fd347fa4482d08c72c49 160 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 56 157 6.6E-41 T 19-04-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 APA12_RS13270 d6619dceaef1fd347fa4482d08c72c49 160 SUPERFAMILY SSF103088 48 154 4.71E-32 T 19-04-2016 IPR006665 OmpA-like domain APA12_RS13270 d6619dceaef1fd347fa4482d08c72c49 160 Pfam PF00691 OmpA family 58 153 1.0E-19 T 19-04-2016 IPR006665 OmpA-like domain APA12_RS04405 21f22e063aa9e39879ba0ac24267ee5f 224 Pfam PF00929 Exonuclease 6 164 2.1E-37 T 19-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APA12_RS04405 21f22e063aa9e39879ba0ac24267ee5f 224 PANTHER PTHR30231:SF0 3 170 8.2E-65 T 19-04-2016 APA12_RS04405 21f22e063aa9e39879ba0ac24267ee5f 224 SUPERFAMILY SSF53098 4 170 2.01E-52 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS04405 21f22e063aa9e39879ba0ac24267ee5f 224 Gene3D G3DSA:3.30.420.10 3 172 8.2E-62 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS04405 21f22e063aa9e39879ba0ac24267ee5f 224 PANTHER PTHR30231 3 170 8.2E-65 T 19-04-2016 APA12_RS04405 21f22e063aa9e39879ba0ac24267ee5f 224 SMART SM00479 3 173 8.9E-48 T 19-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APA12_RS04405 21f22e063aa9e39879ba0ac24267ee5f 224 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 3 219 1.9E-79 T 19-04-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APA12_RS04405 21f22e063aa9e39879ba0ac24267ee5f 224 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 6 171 1.2E-46 T 19-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APA12_RS13105 d216b580f12caaab038880bf09e1a752 422 Gene3D G3DSA:1.10.240.10 241 322 8.1E-34 T 19-04-2016 APA12_RS13105 d216b580f12caaab038880bf09e1a752 422 SUPERFAMILY SSF55174 311 417 1.91E-14 T 19-04-2016 APA12_RS13105 d216b580f12caaab038880bf09e1a752 422 SUPERFAMILY SSF52374 10 328 1.41E-92 T 19-04-2016 APA12_RS13105 d216b580f12caaab038880bf09e1a752 422 Gene3D G3DSA:3.10.290.10 323 418 4.8E-25 T 19-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APA12_RS13105 d216b580f12caaab038880bf09e1a752 422 Gene3D G3DSA:3.40.50.620 4 240 2.4E-95 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS13105 d216b580f12caaab038880bf09e1a752 422 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 170 185 4.4E-26 T 19-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 APA12_RS13105 d216b580f12caaab038880bf09e1a752 422 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 224 236 4.4E-26 T 19-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 APA12_RS13105 d216b580f12caaab038880bf09e1a752 422 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 191 213 4.4E-26 T 19-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 APA12_RS13105 d216b580f12caaab038880bf09e1a752 422 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 50 72 4.4E-26 T 19-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 APA12_RS13105 d216b580f12caaab038880bf09e1a752 422 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 12 417 1.8E-108 T 19-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 APA12_RS13105 d216b580f12caaab038880bf09e1a752 422 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 8 418 42.505 T 19-04-2016 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 APA12_RS13105 d216b580f12caaab038880bf09e1a752 422 PANTHER PTHR11766 1 417 1.1E-171 T 19-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 APA12_RS13105 d216b580f12caaab038880bf09e1a752 422 Pfam PF00579 tRNA synthetases class I (W and Y) 35 329 5.2E-76 T 19-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS05880 2fde93c764ee6c0e2a80a21d1aba902c 563 SUPERFAMILY SSF56014 132 284 2.88E-45 T 19-04-2016 APA12_RS05880 2fde93c764ee6c0e2a80a21d1aba902c 563 Gene3D G3DSA:3.30.413.10 420 558 2.4E-33 T 19-04-2016 APA12_RS05880 2fde93c764ee6c0e2a80a21d1aba902c 563 Gene3D G3DSA:3.90.480.10 60 129 7.1E-41 T 19-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APA12_RS05880 2fde93c764ee6c0e2a80a21d1aba902c 563 Gene3D G3DSA:3.90.480.10 333 414 7.1E-41 T 19-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APA12_RS05880 2fde93c764ee6c0e2a80a21d1aba902c 563 Gene3D G3DSA:3.30.413.10 132 283 3.5E-40 T 19-04-2016 APA12_RS05880 2fde93c764ee6c0e2a80a21d1aba902c 563 SUPERFAMILY SSF56014 421 561 1.09E-35 T 19-04-2016 APA12_RS05880 2fde93c764ee6c0e2a80a21d1aba902c 563 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 462 558 4.0E-11 T 19-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APA12_RS05880 2fde93c764ee6c0e2a80a21d1aba902c 563 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 131 283 2.8E-40 T 19-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APA12_RS05880 2fde93c764ee6c0e2a80a21d1aba902c 563 PANTHER PTHR11493 339 561 3.9E-142 T 19-04-2016 APA12_RS05880 2fde93c764ee6c0e2a80a21d1aba902c 563 PANTHER PTHR11493 13 306 3.9E-142 T 19-04-2016 APA12_RS05880 2fde93c764ee6c0e2a80a21d1aba902c 563 PANTHER PTHR11493:SF47 339 561 3.9E-142 T 19-04-2016 APA12_RS05880 2fde93c764ee6c0e2a80a21d1aba902c 563 PANTHER PTHR11493:SF47 13 306 3.9E-142 T 19-04-2016 APA12_RS05880 2fde93c764ee6c0e2a80a21d1aba902c 563 SUPERFAMILY SSF55124 327 433 9.81E-25 T 19-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APA12_RS05880 2fde93c764ee6c0e2a80a21d1aba902c 563 SUPERFAMILY SSF55124 264 288 9.81E-25 T 19-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APA12_RS05880 2fde93c764ee6c0e2a80a21d1aba902c 563 SUPERFAMILY SSF55124 11 138 1.19E-30 T 19-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APA12_RS05880 2fde93c764ee6c0e2a80a21d1aba902c 563 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 64 122 4.0E-18 T 19-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APA12_RS05880 2fde93c764ee6c0e2a80a21d1aba902c 563 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 340 410 7.3E-16 T 19-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APA12_RS00470 6a52817c20173aee2058c940724a6ae0 201 PANTHER PTHR11403 12 201 5.0E-84 T 19-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 APA12_RS00470 6a52817c20173aee2058c940724a6ae0 201 SUPERFAMILY SSF81452 9 197 1.96E-51 T 19-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 APA12_RS00470 6a52817c20173aee2058c940724a6ae0 201 Gene3D G3DSA:1.20.120.80 18 198 1.1E-46 T 19-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 APA12_RS00470 6a52817c20173aee2058c940724a6ae0 201 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 22 201 3.5E-78 T 19-04-2016 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 APA12_RS00470 6a52817c20173aee2058c940724a6ae0 201 Pfam PF00510 Cytochrome c oxidase subunit III 11 197 3.6E-9 T 19-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 APA12_RS00470 6a52817c20173aee2058c940724a6ae0 201 PANTHER PTHR11403:SF2 12 201 5.0E-84 T 19-04-2016 APA12_RS05240 a8f60676c1b75198e369848b2ccea354 183 Pfam PF03729 Short repeat of unknown function (DUF308) 84 138 0.0015 T 19-04-2016 IPR005325 Protein of unknown function DUF308, membrane APA12_RS05240 a8f60676c1b75198e369848b2ccea354 183 Pfam PF03729 Short repeat of unknown function (DUF308) 13 81 7.6E-12 T 19-04-2016 IPR005325 Protein of unknown function DUF308, membrane APA12_RS05240 a8f60676c1b75198e369848b2ccea354 183 PANTHER PTHR34989 3 180 1.6E-31 T 19-04-2016 APA12_RS05240 a8f60676c1b75198e369848b2ccea354 183 PANTHER PTHR34989:SF1 3 180 1.6E-31 T 19-04-2016 APA12_RS05275 d784d238fd64b4ce9244ef935bf19fcb 742 PANTHER PTHR11070 20 735 2.4E-203 T 19-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APA12_RS05275 d784d238fd64b4ce9244ef935bf19fcb 742 Gene3D G3DSA:3.40.50.300 209 306 5.1E-71 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05275 d784d238fd64b4ce9244ef935bf19fcb 742 Gene3D G3DSA:3.40.50.300 21 126 5.1E-71 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05275 d784d238fd64b4ce9244ef935bf19fcb 742 SUPERFAMILY SSF52540 20 655 4.78E-171 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05275 d784d238fd64b4ce9244ef935bf19fcb 742 Gene3D G3DSA:3.40.50.300 565 656 7.5E-63 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05275 d784d238fd64b4ce9244ef935bf19fcb 742 Gene3D G3DSA:3.40.50.300 307 410 7.5E-63 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05275 d784d238fd64b4ce9244ef935bf19fcb 742 Gene3D G3DSA:1.10.10.160 130 208 5.8E-20 T 19-04-2016 IPR013986 DExx box DNA helicase domain APA12_RS05275 d784d238fd64b4ce9244ef935bf19fcb 742 Pfam PF13361 UvrD-like helicase C-terminal domain 298 627 1.4E-58 T 19-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 APA12_RS05275 d784d238fd64b4ce9244ef935bf19fcb 742 Gene3D G3DSA:1.10.486.10 411 555 6.0E-43 T 19-04-2016 APA12_RS05275 d784d238fd64b4ce9244ef935bf19fcb 742 Pfam PF00580 UvrD/REP helicase N-terminal domain 26 293 1.8E-73 T 19-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 APA12_RS05275 d784d238fd64b4ce9244ef935bf19fcb 742 PANTHER PTHR11070:SF7 20 735 2.4E-203 T 19-04-2016 APA12_RS04615 fb1a7a7d27dac9f2abcc82572478a76a 427 ProSitePatterns PS00217 Sugar transport proteins signature 2. 119 144 - T 19-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APA12_RS04615 fb1a7a7d27dac9f2abcc82572478a76a 427 ProSitePatterns PS00216 Sugar transport proteins signature 1. 69 85 - T 19-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APA12_RS04615 fb1a7a7d27dac9f2abcc82572478a76a 427 SUPERFAMILY SSF103473 9 412 1.57E-63 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS04615 fb1a7a7d27dac9f2abcc82572478a76a 427 Pfam PF07690 Major Facilitator Superfamily 20 359 7.1E-30 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APA12_RS04615 fb1a7a7d27dac9f2abcc82572478a76a 427 Gene3D G3DSA:1.20.1250.20 10 216 1.1E-26 T 19-04-2016 APA12_RS04615 fb1a7a7d27dac9f2abcc82572478a76a 427 Gene3D G3DSA:1.20.1250.20 230 413 1.2E-20 T 19-04-2016 APA12_RS04615 fb1a7a7d27dac9f2abcc82572478a76a 427 PANTHER PTHR23508 2 419 1.9E-207 T 19-04-2016 APA12_RS04615 fb1a7a7d27dac9f2abcc82572478a76a 427 PANTHER PTHR23508:SF4 2 419 1.9E-207 T 19-04-2016 APA12_RS10030 fc3d44d47177af617ea3b3f49c16c260 164 Pfam PF00075 RNase H 17 154 2.5E-44 T 19-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 APA12_RS10030 fc3d44d47177af617ea3b3f49c16c260 164 SUPERFAMILY SSF53098 18 156 1.52E-53 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS10030 fc3d44d47177af617ea3b3f49c16c260 164 Hamap MF_00042 Ribonuclease H [rnhA]. 15 163 31.34 T 19-04-2016 IPR022892 Ribonuclease H GO:0004523 APA12_RS10030 fc3d44d47177af617ea3b3f49c16c260 164 Gene3D G3DSA:3.30.420.10 18 157 2.4E-55 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS10030 fc3d44d47177af617ea3b3f49c16c260 164 PANTHER PTHR10642 18 160 4.0E-52 T 19-04-2016 APA12_RS00425 3f3f4300678cf6b8416376e23f9015e3 431 Gene3D G3DSA:3.40.50.10180 17 251 3.6E-98 T 19-04-2016 APA12_RS00425 3f3f4300678cf6b8416376e23f9015e3 431 SUPERFAMILY SSF82544 15 430 5.36E-145 T 19-04-2016 APA12_RS00425 3f3f4300678cf6b8416376e23f9015e3 431 Pfam PF13660 Domain of unknown function (DUF4147) 17 238 1.4E-83 T 19-04-2016 IPR025286 MOFRL-associated domain APA12_RS00425 3f3f4300678cf6b8416376e23f9015e3 431 Pfam PF05161 MOFRL family 317 424 5.3E-36 T 19-04-2016 IPR007835 MOFRL domain APA12_RS00425 3f3f4300678cf6b8416376e23f9015e3 431 PANTHER PTHR12227:SF0 15 430 3.3E-140 T 19-04-2016 APA12_RS00425 3f3f4300678cf6b8416376e23f9015e3 431 Gene3D G3DSA:3.40.1480.10 252 430 9.2E-62 T 19-04-2016 IPR007835 MOFRL domain APA12_RS00425 3f3f4300678cf6b8416376e23f9015e3 431 PANTHER PTHR12227 15 430 3.3E-140 T 19-04-2016 APA12_RS06545 0eed33cd6a5d30b03b837c9d4f394257 440 Gene3D G3DSA:2.30.40.10 33 78 4.5E-4 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APA12_RS06545 0eed33cd6a5d30b03b837c9d4f394257 440 SUPERFAMILY SSF51556 75 379 3.68E-89 T 19-04-2016 IPR032466 Metal-dependent hydrolase APA12_RS06545 0eed33cd6a5d30b03b837c9d4f394257 440 PANTHER PTHR11271:SF6 30 439 2.2E-138 T 19-04-2016 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|UniPathway: UPA00603 APA12_RS06545 0eed33cd6a5d30b03b837c9d4f394257 440 Pfam PF01979 Amidohydrolase family 71 436 8.9E-56 T 19-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APA12_RS06545 0eed33cd6a5d30b03b837c9d4f394257 440 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 31 433 8.7E-173 T 19-04-2016 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|UniPathway: UPA00603 APA12_RS06545 0eed33cd6a5d30b03b837c9d4f394257 440 Gene3D G3DSA:2.30.40.10 366 439 4.0E-12 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APA12_RS06545 0eed33cd6a5d30b03b837c9d4f394257 440 SUPERFAMILY SSF51338 30 74 1.94E-8 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APA12_RS06545 0eed33cd6a5d30b03b837c9d4f394257 440 SUPERFAMILY SSF51338 379 438 1.94E-8 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APA12_RS06545 0eed33cd6a5d30b03b837c9d4f394257 440 PANTHER PTHR11271 30 439 2.2E-138 T 19-04-2016 APA12_RS06545 0eed33cd6a5d30b03b837c9d4f394257 440 Gene3D G3DSA:3.20.20.140 79 365 1.8E-105 T 19-04-2016 APA12_RS09290 062b88c8d9e3a94ee92384db93b431f8 372 Pfam PF00355 Rieske [2Fe-2S] domain 35 115 2.3E-19 T 19-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APA12_RS09290 062b88c8d9e3a94ee92384db93b431f8 372 Gene3D G3DSA:2.102.10.10 33 144 5.2E-31 T 19-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APA12_RS09290 062b88c8d9e3a94ee92384db93b431f8 372 PANTHER PTHR21266 32 330 8.4E-43 T 19-04-2016 APA12_RS09290 062b88c8d9e3a94ee92384db93b431f8 372 SUPERFAMILY SSF55961 133 357 9.34E-24 T 19-04-2016 APA12_RS09290 062b88c8d9e3a94ee92384db93b431f8 372 SUPERFAMILY SSF50022 29 143 2.36E-34 T 19-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APA12_RS06680 213dbede0b4ddc9db4a994832e3c4ff2 180 SUPERFAMILY SSF55729 5 144 1.44E-22 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase APA12_RS06680 213dbede0b4ddc9db4a994832e3c4ff2 180 PANTHER PTHR23091:SF225 7 161 7.4E-16 T 19-04-2016 APA12_RS06680 213dbede0b4ddc9db4a994832e3c4ff2 180 PANTHER PTHR23091 7 161 7.4E-16 T 19-04-2016 APA12_RS06680 213dbede0b4ddc9db4a994832e3c4ff2 180 Pfam PF00583 Acetyltransferase (GNAT) family 64 139 2.9E-10 T 19-04-2016 IPR000182 GNAT domain GO:0008080 APA12_RS06680 213dbede0b4ddc9db4a994832e3c4ff2 180 Gene3D G3DSA:3.40.630.30 5 143 3.9E-19 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase APA12_RS04835 b974afb11017a1f40fdaf84f38c27686 353 PANTHER PTHR30024:SF1 10 227 1.3E-16 T 19-04-2016 APA12_RS04835 b974afb11017a1f40fdaf84f38c27686 353 Gene3D G3DSA:3.40.190.10 46 112 3.0E-4 T 19-04-2016 APA12_RS04835 b974afb11017a1f40fdaf84f38c27686 353 Gene3D G3DSA:3.40.190.10 160 284 2.3E-5 T 19-04-2016 APA12_RS04835 b974afb11017a1f40fdaf84f38c27686 353 PANTHER PTHR30024 10 227 1.3E-16 T 19-04-2016 APA12_RS04835 b974afb11017a1f40fdaf84f38c27686 353 SUPERFAMILY SSF53850 37 281 1.44E-24 T 19-04-2016 APA12_RS04835 b974afb11017a1f40fdaf84f38c27686 353 Pfam PF13379 NMT1-like family 36 250 3.6E-20 T 19-04-2016 APA12_RS03625 3cd2c1c8a25577c00503235948b16c04 333 SUPERFAMILY SSF55821 7 208 8.55E-57 T 19-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APA12_RS03625 3cd2c1c8a25577c00503235948b16c04 333 PANTHER PTHR17490:SF3 11 325 4.6E-92 T 19-04-2016 APA12_RS03625 3cd2c1c8a25577c00503235948b16c04 333 Pfam PF03481 Putative GTP-binding controlling metal-binding 197 321 2.5E-19 T 19-04-2016 IPR005145 Putative GTP-binding controlling metal-binding domain APA12_RS03625 3cd2c1c8a25577c00503235948b16c04 333 PIRSF PIRSF004930 2 325 5.4E-99 T 19-04-2016 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 APA12_RS03625 3cd2c1c8a25577c00503235948b16c04 333 Pfam PF01300 Telomere recombination 18 195 5.0E-49 T 19-04-2016 IPR006070 YrdC-like domain GO:0003725 APA12_RS03625 3cd2c1c8a25577c00503235948b16c04 333 Gene3D G3DSA:3.90.870.10 8 207 1.1E-65 T 19-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APA12_RS03625 3cd2c1c8a25577c00503235948b16c04 333 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 6 205 2.4E-49 T 19-04-2016 IPR006070 YrdC-like domain GO:0003725 APA12_RS03625 3cd2c1c8a25577c00503235948b16c04 333 PANTHER PTHR17490 11 325 4.6E-92 T 19-04-2016 APA12_RS05315 15d0bc3d9f024e6793d084abd235a70c 168 PANTHER PTHR11527:SF145 1 144 2.5E-40 T 19-04-2016 APA12_RS05315 15d0bc3d9f024e6793d084abd235a70c 168 PANTHER PTHR11527 1 144 2.5E-40 T 19-04-2016 IPR031107 Small heat shock protein HSP20 APA12_RS05315 15d0bc3d9f024e6793d084abd235a70c 168 Pfam PF00011 Hsp20/alpha crystallin family 41 136 8.1E-18 T 19-04-2016 IPR002068 Alpha crystallin/Hsp20 domain APA12_RS05315 15d0bc3d9f024e6793d084abd235a70c 168 Gene3D G3DSA:2.60.40.790 6 137 1.1E-19 T 19-04-2016 IPR008978 HSP20-like chaperone APA12_RS05315 15d0bc3d9f024e6793d084abd235a70c 168 SUPERFAMILY SSF49764 29 137 5.23E-22 T 19-04-2016 IPR008978 HSP20-like chaperone APA12_RS05365 00bc0a9fba24b74a6d414360bb61ebdd 251 Gene3D G3DSA:3.40.50.150 32 243 2.0E-52 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS05365 00bc0a9fba24b74a6d414360bb61ebdd 251 Pfam PF05175 Methyltransferase small domain 34 169 9.9E-9 T 19-04-2016 IPR007848 Methyltransferase small domain GO:0008168 APA12_RS05365 00bc0a9fba24b74a6d414360bb61ebdd 251 SUPERFAMILY SSF53335 34 198 1.79E-24 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS05445 cabcd9cfaf84b75c4a208b6230896850 472 PANTHER PTHR11918:SF43 23 465 1.1E-169 T 19-04-2016 APA12_RS05445 cabcd9cfaf84b75c4a208b6230896850 472 Gene3D G3DSA:3.80.30.20 174 404 3.9E-76 T 19-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APA12_RS05445 cabcd9cfaf84b75c4a208b6230896850 472 Pfam PF01938 TRAM domain 407 464 6.1E-6 T 19-04-2016 IPR002792 TRAM domain APA12_RS05445 cabcd9cfaf84b75c4a208b6230896850 472 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 178 198 - T 19-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 APA12_RS05445 cabcd9cfaf84b75c4a208b6230896850 472 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 26 463 1.6E-140 T 19-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 APA12_RS05445 cabcd9cfaf84b75c4a208b6230896850 472 Pfam PF04055 Radical SAM superfamily 179 352 1.1E-30 T 19-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APA12_RS05445 cabcd9cfaf84b75c4a208b6230896850 472 PANTHER PTHR11918 23 465 1.1E-169 T 19-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein APA12_RS05445 cabcd9cfaf84b75c4a208b6230896850 472 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 25 463 5.9E-145 T 19-04-2016 APA12_RS05445 cabcd9cfaf84b75c4a208b6230896850 472 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 23 466 71.028 T 19-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 APA12_RS05445 cabcd9cfaf84b75c4a208b6230896850 472 SUPERFAMILY SSF102114 161 398 1.06E-59 T 19-04-2016 APA12_RS05445 cabcd9cfaf84b75c4a208b6230896850 472 SMART SM00729 174 394 6.2E-56 T 19-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APA12_RS05445 cabcd9cfaf84b75c4a208b6230896850 472 Pfam PF00919 Uncharacterized protein family UPF0004 26 127 1.3E-28 T 19-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 APA12_RS10500 c23efb8b4590516ccb59a7c8f4c56a08 823 PANTHER PTHR30069:SF4 89 779 2.8E-22 T 19-04-2016 APA12_RS10500 c23efb8b4590516ccb59a7c8f4c56a08 823 Pfam PF07715 TonB-dependent Receptor Plug Domain 86 207 1.6E-18 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS10500 c23efb8b4590516ccb59a7c8f4c56a08 823 SUPERFAMILY SSF56935 647 801 4.03E-66 T 19-04-2016 APA12_RS10500 c23efb8b4590516ccb59a7c8f4c56a08 823 SUPERFAMILY SSF56935 69 616 4.03E-66 T 19-04-2016 APA12_RS10500 c23efb8b4590516ccb59a7c8f4c56a08 823 Gene3D G3DSA:2.170.130.10 86 209 6.8E-28 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS10500 c23efb8b4590516ccb59a7c8f4c56a08 823 Pfam PF00593 TonB dependent receptor 520 788 1.1E-15 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS10500 c23efb8b4590516ccb59a7c8f4c56a08 823 Gene3D G3DSA:2.40.170.20 210 823 5.7E-50 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS10500 c23efb8b4590516ccb59a7c8f4c56a08 823 PANTHER PTHR30069 89 779 2.8E-22 T 19-04-2016 APA12_RS15490 b2132a2a8462d5d79fdd1d6486dcda78 274 Gene3D G3DSA:2.130.10.10 22 254 2.3E-37 T 19-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APA12_RS15490 b2132a2a8462d5d79fdd1d6486dcda78 274 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 27 63 1.8E-11 T 19-04-2016 IPR011964 YVTN beta-propeller repeat APA12_RS15490 b2132a2a8462d5d79fdd1d6486dcda78 274 SUPERFAMILY SSF50974 22 272 1.6E-47 T 19-04-2016 IPR011045 Nitrous oxide reductase, N-terminal APA12_RS15490 b2132a2a8462d5d79fdd1d6486dcda78 274 PANTHER PTHR13833 1 150 3.8E-12 T 19-04-2016 APA12_RS15490 b2132a2a8462d5d79fdd1d6486dcda78 274 PANTHER PTHR13833 197 251 3.8E-12 T 19-04-2016 APA12_RS02000 9dd146f12a26db00fb50e41de40c389a 403 Pfam PF11946 Domain of unknown function (DUF3463) 195 328 1.0E-58 T 19-04-2016 IPR022563 Domain of unknown function DUF3463 APA12_RS02000 9dd146f12a26db00fb50e41de40c389a 403 Pfam PF04055 Radical SAM superfamily 34 183 3.6E-13 T 19-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APA12_RS02000 9dd146f12a26db00fb50e41de40c389a 403 Gene3D G3DSA:3.20.20.70 21 308 9.2E-41 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS02000 9dd146f12a26db00fb50e41de40c389a 403 PANTHER PTHR11228 22 324 1.4E-88 T 19-04-2016 APA12_RS02000 9dd146f12a26db00fb50e41de40c389a 403 SUPERFAMILY SSF102114 22 307 3.73E-49 T 19-04-2016 APA12_RS02000 9dd146f12a26db00fb50e41de40c389a 403 PANTHER PTHR11228:SF22 22 324 1.4E-88 T 19-04-2016 APA12_RS02000 9dd146f12a26db00fb50e41de40c389a 403 TIGRFAM TIGR03470 HpnH: hopanoid biosynthesis associated radical SAM protein HpnH 1 318 7.3E-167 T 19-04-2016 IPR017833 Hopanoid biosynthesis associated radical SAM protein HpnH APA12_RS04660 c4cbb4433de1854b87097d54acdd45cc 230 PANTHER PTHR23105 20 228 4.4E-84 T 19-04-2016 APA12_RS04660 c4cbb4433de1854b87097d54acdd45cc 230 PIRSF PIRSF002155 1 226 1.9E-76 T 19-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 APA12_RS04660 c4cbb4433de1854b87097d54acdd45cc 230 SUPERFAMILY SSF56808 5 225 1.12E-82 T 19-04-2016 IPR023674 Ribosomal protein L1-like APA12_RS04660 c4cbb4433de1854b87097d54acdd45cc 230 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 228 43.621 T 19-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 APA12_RS04660 c4cbb4433de1854b87097d54acdd45cc 230 ProSitePatterns PS01199 Ribosomal protein L1 signature. 119 138 - T 19-04-2016 IPR023673 Ribosomal protein L1, conserved site APA12_RS04660 c4cbb4433de1854b87097d54acdd45cc 230 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 8.5E-56 T 19-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein APA12_RS04660 c4cbb4433de1854b87097d54acdd45cc 230 PANTHER PTHR23105:SF5 20 228 4.4E-84 T 19-04-2016 APA12_RS04660 c4cbb4433de1854b87097d54acdd45cc 230 Gene3D G3DSA:3.30.190.20 160 226 7.9E-49 T 19-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 APA12_RS04660 c4cbb4433de1854b87097d54acdd45cc 230 Gene3D G3DSA:3.30.190.20 17 67 7.9E-49 T 19-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 APA12_RS04660 c4cbb4433de1854b87097d54acdd45cc 230 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 226 1.1E-102 T 19-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 APA12_RS04660 c4cbb4433de1854b87097d54acdd45cc 230 Gene3D G3DSA:3.40.50.790 68 158 2.0E-41 T 19-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich APA12_RS11165 7c4dd898569d8f321d2a2753d7aefae0 252 SMART SM01007 14 194 7.1E-55 T 19-04-2016 IPR001303 Class II aldolase/adducin N-terminal APA12_RS11165 7c4dd898569d8f321d2a2753d7aefae0 252 PANTHER PTHR10672 12 233 8.4E-58 T 19-04-2016 APA12_RS11165 7c4dd898569d8f321d2a2753d7aefae0 252 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 15 193 2.2E-40 T 19-04-2016 IPR001303 Class II aldolase/adducin N-terminal APA12_RS11165 7c4dd898569d8f321d2a2753d7aefae0 252 SUPERFAMILY SSF53639 5 216 8.63E-51 T 19-04-2016 IPR001303 Class II aldolase/adducin N-terminal APA12_RS11165 7c4dd898569d8f321d2a2753d7aefae0 252 Gene3D G3DSA:3.40.225.10 8 219 1.1E-49 T 19-04-2016 IPR001303 Class II aldolase/adducin N-terminal APA12_RS05645 4460c29b4101b27275758499e45233a2 469 Gene3D G3DSA:3.40.120.10 174 251 2.8E-29 T 19-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS05645 4460c29b4101b27275758499e45233a2 469 Gene3D G3DSA:3.40.120.10 252 369 2.6E-41 T 19-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS05645 4460c29b4101b27275758499e45233a2 469 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 100 109 - T 19-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS05645 4460c29b4101b27275758499e45233a2 469 SUPERFAMILY SSF55957 369 451 7.32E-22 T 19-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS05645 4460c29b4101b27275758499e45233a2 469 PANTHER PTHR22573:SF28 1 461 7.1E-153 T 19-04-2016 APA12_RS05645 4460c29b4101b27275758499e45233a2 469 Gene3D G3DSA:3.40.120.10 11 127 1.3E-31 T 19-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS05645 4460c29b4101b27275758499e45233a2 469 SUPERFAMILY SSF53738 7 178 5.1E-36 T 19-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS05645 4460c29b4101b27275758499e45233a2 469 SUPERFAMILY SSF53738 155 257 6.28E-26 T 19-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS05645 4460c29b4101b27275758499e45233a2 469 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 255 4.0E-23 T 19-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS05645 4460c29b4101b27275758499e45233a2 469 PANTHER PTHR22573 1 461 7.1E-153 T 19-04-2016 APA12_RS05645 4460c29b4101b27275758499e45233a2 469 Gene3D G3DSA:3.30.310.50 372 452 1.4E-25 T 19-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS05645 4460c29b4101b27275758499e45233a2 469 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 260 370 1.6E-21 T 19-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS05645 4460c29b4101b27275758499e45233a2 469 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 375 450 3.3E-12 T 19-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS05645 4460c29b4101b27275758499e45233a2 469 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 12 136 2.0E-30 T 19-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS05645 4460c29b4101b27275758499e45233a2 469 SUPERFAMILY SSF53738 259 366 5.1E-32 T 19-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS05645 4460c29b4101b27275758499e45233a2 469 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 7.6E-20 T 19-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS05645 4460c29b4101b27275758499e45233a2 469 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 172 191 7.6E-20 T 19-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS05645 4460c29b4101b27275758499e45233a2 469 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 99 113 7.6E-20 T 19-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS05645 4460c29b4101b27275758499e45233a2 469 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 206 219 7.6E-20 T 19-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APA12_RS05370 2b39d52ccaf952cc5b0461e98500e6b1 356 Pfam PF00348 Polyprenyl synthetase 60 306 3.3E-71 T 19-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APA12_RS05370 2b39d52ccaf952cc5b0461e98500e6b1 356 PANTHER PTHR12001 38 356 2.9E-103 T 19-04-2016 IPR017446 Polyprenyl synthetase-related APA12_RS05370 2b39d52ccaf952cc5b0461e98500e6b1 356 PANTHER PTHR12001:SF47 38 356 2.9E-103 T 19-04-2016 APA12_RS05370 2b39d52ccaf952cc5b0461e98500e6b1 356 SUPERFAMILY SSF48576 33 354 4.32E-93 T 19-04-2016 IPR008949 Isoprenoid synthase domain APA12_RS05370 2b39d52ccaf952cc5b0461e98500e6b1 356 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 113 127 - T 19-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APA12_RS05370 2b39d52ccaf952cc5b0461e98500e6b1 356 Gene3D G3DSA:1.10.600.10 34 355 7.7E-97 T 19-04-2016 IPR008949 Isoprenoid synthase domain APA12_RS02085 4dec9ef97588d42d30851e8d32bac5f2 139 Gene3D G3DSA:1.10.10.690 27 113 1.3E-4 T 19-04-2016 IPR027405 YidB-like APA12_RS02085 4dec9ef97588d42d30851e8d32bac5f2 139 SUPERFAMILY SSF140804 25 114 1.03E-8 T 19-04-2016 IPR027405 YidB-like APA12_RS09485 2a219ca01cbdd3a26c7493308905959f 433 SUPERFAMILY SSF53098 127 370 9.1E-6 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS09485 2a219ca01cbdd3a26c7493308905959f 433 Pfam PF13701 Transposase DDE domain group 1 1 430 4.4E-159 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS05420 b8daf91c4ad66e1a6633d83ad4f1d478 1515 PANTHER PTHR18937 1047 1094 1.0E-221 T 19-04-2016 APA12_RS05420 b8daf91c4ad66e1a6633d83ad4f1d478 1515 PANTHER PTHR18937 317 558 1.0E-221 T 19-04-2016 APA12_RS05420 b8daf91c4ad66e1a6633d83ad4f1d478 1515 PANTHER PTHR18937 7 239 1.0E-221 T 19-04-2016 APA12_RS05420 b8daf91c4ad66e1a6633d83ad4f1d478 1515 PANTHER PTHR18937 863 905 1.0E-221 T 19-04-2016 APA12_RS05420 b8daf91c4ad66e1a6633d83ad4f1d478 1515 PANTHER PTHR18937 1201 1499 1.0E-221 T 19-04-2016 APA12_RS05420 b8daf91c4ad66e1a6633d83ad4f1d478 1515 PANTHER PTHR18937 928 1012 1.0E-221 T 19-04-2016 APA12_RS05420 b8daf91c4ad66e1a6633d83ad4f1d478 1515 PANTHER PTHR18937 635 839 1.0E-221 T 19-04-2016 APA12_RS05420 b8daf91c4ad66e1a6633d83ad4f1d478 1515 SMART SM00968 689 777 0.001 T 19-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 APA12_RS05420 b8daf91c4ad66e1a6633d83ad4f1d478 1515 Hamap MF_01894 Chromosome partition protein Smc [smc]. 3 1498 19.951 T 19-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 APA12_RS05420 b8daf91c4ad66e1a6633d83ad4f1d478 1515 SUPERFAMILY SSF57997 364 517 1.05E-6 T 19-04-2016 APA12_RS05420 b8daf91c4ad66e1a6633d83ad4f1d478 1515 SUPERFAMILY SSF52540 3 215 2.16E-44 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05420 b8daf91c4ad66e1a6633d83ad4f1d478 1515 SUPERFAMILY SSF52540 1380 1492 2.16E-44 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05420 b8daf91c4ad66e1a6633d83ad4f1d478 1515 PANTHER PTHR18937:SF261 1047 1094 1.0E-221 T 19-04-2016 APA12_RS05420 b8daf91c4ad66e1a6633d83ad4f1d478 1515 PANTHER PTHR18937:SF261 317 558 1.0E-221 T 19-04-2016 APA12_RS05420 b8daf91c4ad66e1a6633d83ad4f1d478 1515 PANTHER PTHR18937:SF261 7 239 1.0E-221 T 19-04-2016 APA12_RS05420 b8daf91c4ad66e1a6633d83ad4f1d478 1515 PANTHER PTHR18937:SF261 863 905 1.0E-221 T 19-04-2016 APA12_RS05420 b8daf91c4ad66e1a6633d83ad4f1d478 1515 PANTHER PTHR18937:SF261 1201 1499 1.0E-221 T 19-04-2016 APA12_RS05420 b8daf91c4ad66e1a6633d83ad4f1d478 1515 PANTHER PTHR18937:SF261 928 1012 1.0E-221 T 19-04-2016 APA12_RS05420 b8daf91c4ad66e1a6633d83ad4f1d478 1515 PANTHER PTHR18937:SF261 635 839 1.0E-221 T 19-04-2016 APA12_RS05420 b8daf91c4ad66e1a6633d83ad4f1d478 1515 Pfam PF02463 RecF/RecN/SMC N terminal domain 7 1489 3.4E-56 T 19-04-2016 IPR003395 RecF/RecN/SMC, N-terminal APA12_RS05420 b8daf91c4ad66e1a6633d83ad4f1d478 1515 Gene3D G3DSA:3.40.50.300 1343 1498 6.0E-81 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05420 b8daf91c4ad66e1a6633d83ad4f1d478 1515 Gene3D G3DSA:3.40.50.300 5 168 6.0E-81 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05420 b8daf91c4ad66e1a6633d83ad4f1d478 1515 SUPERFAMILY SSF75553 653 810 2.35E-8 T 19-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 APA12_RS03300 6c0fc12d95b0b2f35508b05798ec51bf 278 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 212 238 - T 19-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 APA12_RS03300 6c0fc12d95b0b2f35508b05798ec51bf 278 Pfam PF01148 Cytidylyltransferase family 17 250 4.3E-44 T 19-04-2016 APA12_RS03300 6c0fc12d95b0b2f35508b05798ec51bf 278 PANTHER PTHR13773 62 247 7.1E-40 T 19-04-2016 APA12_RS13305 c11f1eb4b13c5f84c6373c7ec2df5e99 202 Pfam PF14520 Helix-hairpin-helix domain 72 130 4.0E-14 T 19-04-2016 APA12_RS13305 c11f1eb4b13c5f84c6373c7ec2df5e99 202 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 201 28.101 T 19-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 APA12_RS13305 c11f1eb4b13c5f84c6373c7ec2df5e99 202 SMART SM00278 108 127 31.0 T 19-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APA12_RS13305 c11f1eb4b13c5f84c6373c7ec2df5e99 202 SMART SM00278 73 92 11.0 T 19-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APA12_RS13305 c11f1eb4b13c5f84c6373c7ec2df5e99 202 SMART SM00278 157 176 2000.0 T 19-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APA12_RS13305 c11f1eb4b13c5f84c6373c7ec2df5e99 202 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 186 8.2E-39 T 19-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 APA12_RS13305 c11f1eb4b13c5f84c6373c7ec2df5e99 202 Gene3D G3DSA:1.10.150.20 67 135 3.9E-26 T 19-04-2016 APA12_RS13305 c11f1eb4b13c5f84c6373c7ec2df5e99 202 SUPERFAMILY SSF47781 66 134 4.25E-20 T 19-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APA12_RS13305 c11f1eb4b13c5f84c6373c7ec2df5e99 202 Gene3D G3DSA:1.10.8.10 152 201 1.0E-8 T 19-04-2016 APA12_RS13305 c11f1eb4b13c5f84c6373c7ec2df5e99 202 Pfam PF07499 RuvA, C-terminal domain 155 200 6.5E-10 T 19-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 APA12_RS13305 c11f1eb4b13c5f84c6373c7ec2df5e99 202 Gene3D G3DSA:2.40.50.140 1 64 1.8E-21 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS13305 c11f1eb4b13c5f84c6373c7ec2df5e99 202 Pfam PF01330 RuvA N terminal domain 1 62 8.2E-17 T 19-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 APA12_RS13305 c11f1eb4b13c5f84c6373c7ec2df5e99 202 SUPERFAMILY SSF50249 1 63 2.57E-15 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS13305 c11f1eb4b13c5f84c6373c7ec2df5e99 202 PANTHER PTHR33796 2 202 1.7E-63 T 19-04-2016 APA12_RS13305 c11f1eb4b13c5f84c6373c7ec2df5e99 202 SUPERFAMILY SSF46929 154 201 2.75E-6 T 19-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 APA12_RS09145 231f812652ffbc8d3bb582151f77f1e0 433 SUPERFAMILY SSF53098 127 370 1.82E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS09145 231f812652ffbc8d3bb582151f77f1e0 433 Pfam PF13701 Transposase DDE domain group 1 1 430 1.5E-158 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS07875 231f812652ffbc8d3bb582151f77f1e0 433 SUPERFAMILY SSF53098 127 370 1.82E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS07875 231f812652ffbc8d3bb582151f77f1e0 433 Pfam PF13701 Transposase DDE domain group 1 1 430 1.5E-158 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS02975 231f812652ffbc8d3bb582151f77f1e0 433 SUPERFAMILY SSF53098 127 370 1.82E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS02975 231f812652ffbc8d3bb582151f77f1e0 433 Pfam PF13701 Transposase DDE domain group 1 1 430 1.5E-158 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS01945 8edfb708aa1f0a39bff2978c4177788e 334 Pfam PF13536 Putative multidrug resistance efflux transporter 62 323 2.3E-80 T 19-04-2016 IPR032713 Putative multidrug resistance efflux transporter APA12_RS04470 c4daa159b00ea3ca10a0391c88f6abe0 233 SUPERFAMILY SSF52540 30 199 9.8E-13 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS04470 c4daa159b00ea3ca10a0391c88f6abe0 233 Gene3D G3DSA:3.40.50.300 30 202 1.9E-11 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS02780 8d49d6827895fefbe90a369c91117202 140 Pfam PF04343 Protein of unknown function, DUF488 9 115 1.8E-32 T 19-04-2016 IPR007438 Protein of unknown function DUF488 APA12_RS02780 8d49d6827895fefbe90a369c91117202 140 PANTHER PTHR36849:SF1 4 122 1.2E-51 T 19-04-2016 APA12_RS02780 8d49d6827895fefbe90a369c91117202 140 PANTHER PTHR36849 4 122 1.2E-51 T 19-04-2016 APA12_RS06180 85a09fb4f344e1c0667b76d6de117b79 639 PANTHER PTHR10657 1 178 7.3E-34 T 19-04-2016 APA12_RS06180 85a09fb4f344e1c0667b76d6de117b79 639 PANTHER PTHR10657 246 373 7.3E-34 T 19-04-2016 APA12_RS06180 85a09fb4f344e1c0667b76d6de117b79 639 Gene3D G3DSA:3.10.50.40 265 379 3.0E-12 T 19-04-2016 APA12_RS06180 85a09fb4f344e1c0667b76d6de117b79 639 SUPERFAMILY SSF109998 246 295 3.77E-21 T 19-04-2016 IPR027304 Trigger factor/SurA domain APA12_RS06180 85a09fb4f344e1c0667b76d6de117b79 639 SUPERFAMILY SSF109998 43 172 3.77E-21 T 19-04-2016 IPR027304 Trigger factor/SurA domain APA12_RS06180 85a09fb4f344e1c0667b76d6de117b79 639 SUPERFAMILY SSF54534 228 356 1.37E-6 T 19-04-2016 APA12_RS06180 85a09fb4f344e1c0667b76d6de117b79 639 Pfam PF13145 PPIC-type PPIASE domain 254 370 4.8E-19 T 19-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 APA12_RS06180 85a09fb4f344e1c0667b76d6de117b79 639 PANTHER PTHR10657:SF13 1 178 7.3E-34 T 19-04-2016 APA12_RS06180 85a09fb4f344e1c0667b76d6de117b79 639 PANTHER PTHR10657:SF13 246 373 7.3E-34 T 19-04-2016 APA12_RS06180 85a09fb4f344e1c0667b76d6de117b79 639 Pfam PF13624 SurA N-terminal domain 1 168 6.8E-34 T 19-04-2016 APA12_RS11820 c89ba78c49b661e6fd5ec752b8f7ca49 231 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 231 3.7E-102 T 19-04-2016 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE APA12_RS11820 c89ba78c49b661e6fd5ec752b8f7ca49 231 Gene3D G3DSA:3.40.50.300 1 224 1.1E-61 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS11820 c89ba78c49b661e6fd5ec752b8f7ca49 231 SMART SM00382 26 204 3.8E-8 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS11820 c89ba78c49b661e6fd5ec752b8f7ca49 231 SUPERFAMILY SSF52540 2 221 3.59E-58 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS11820 c89ba78c49b661e6fd5ec752b8f7ca49 231 Pfam PF00005 ABC transporter 17 160 3.6E-29 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS11820 c89ba78c49b661e6fd5ec752b8f7ca49 231 PANTHER PTHR24220:SF404 3 231 6.9E-114 T 19-04-2016 APA12_RS11820 c89ba78c49b661e6fd5ec752b8f7ca49 231 PANTHER PTHR24220 3 231 6.9E-114 T 19-04-2016 APA12_RS03160 2df00d97ed7382eb9474f13ab9c586a9 406 SUPERFAMILY SSF53659 1 404 2.3E-155 T 19-04-2016 APA12_RS03160 2df00d97ed7382eb9474f13ab9c586a9 406 Gene3D G3DSA:3.40.718.10 3 403 2.9E-174 T 19-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APA12_RS03160 2df00d97ed7382eb9474f13ab9c586a9 406 TIGRFAM TIGR00127 nadp_idh_euk: isocitrate dehydrogenase, NADP-dependent 3 404 4.2E-210 T 19-04-2016 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 APA12_RS03160 2df00d97ed7382eb9474f13ab9c586a9 406 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 270 289 - T 19-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 APA12_RS03160 2df00d97ed7382eb9474f13ab9c586a9 406 PANTHER PTHR11822 1 405 0.0 T 19-04-2016 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 APA12_RS03160 2df00d97ed7382eb9474f13ab9c586a9 406 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 393 4.1E-73 T 19-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APA12_RS03160 2df00d97ed7382eb9474f13ab9c586a9 406 PIRSF PIRSF000108 1 406 1.2E-220 T 19-04-2016 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 APA12_RS03160 2df00d97ed7382eb9474f13ab9c586a9 406 SMART SM01329 9 395 4.9E-134 T 19-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APA12_RS03355 2c5a9707425466c62ff3a4da2fcdaf2c 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 19-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS03355 2c5a9707425466c62ff3a4da2fcdaf2c 44 PANTHER PTHR14503 1 44 8.6E-20 T 19-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS03355 2c5a9707425466c62ff3a4da2fcdaf2c 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 42 3.0E-12 T 19-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS03355 2c5a9707425466c62ff3a4da2fcdaf2c 44 Pfam PF00468 Ribosomal protein L34 1 44 6.4E-23 T 19-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS03355 2c5a9707425466c62ff3a4da2fcdaf2c 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.625 T 19-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS03355 2c5a9707425466c62ff3a4da2fcdaf2c 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 1.5E-23 T 19-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS03685 905e3c7aa7cead7827c03c4a61f25492 220 Pfam PF02631 RecX family 76 204 1.0E-12 T 19-04-2016 IPR003783 Regulatory protein RecX GO:0006282 APA12_RS11375 e5c504f43195a12d0bf76e48d592170b 184 PIRSF PIRSF006135 15 182 1.1E-50 T 19-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 APA12_RS11375 e5c504f43195a12d0bf76e48d592170b 184 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 17 178 1.6E-57 T 19-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 APA12_RS11375 e5c504f43195a12d0bf76e48d592170b 184 PANTHER PTHR34848 5 182 1.4E-64 T 19-04-2016 APA12_RS11375 e5c504f43195a12d0bf76e48d592170b 184 Gene3D G3DSA:3.40.50.300 17 180 1.6E-58 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS11375 e5c504f43195a12d0bf76e48d592170b 184 SUPERFAMILY SSF52540 17 180 6.23E-50 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS03280 eaa9643c1d210966dca716fe3c244696 300 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 11 167 3.0E-26 T 19-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APA12_RS03280 eaa9643c1d210966dca716fe3c244696 300 SUPERFAMILY SSF52540 12 206 8.46E-45 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS03280 eaa9643c1d210966dca716fe3c244696 300 Pfam PF01926 50S ribosome-binding GTPase 11 125 2.8E-23 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 APA12_RS03280 eaa9643c1d210966dca716fe3c244696 300 TIGRFAM TIGR00436 era: GTP-binding protein Era 9 279 5.8E-74 T 19-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 APA12_RS03280 eaa9643c1d210966dca716fe3c244696 300 SUPERFAMILY SSF54814 181 297 4.25E-35 T 19-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 APA12_RS03280 eaa9643c1d210966dca716fe3c244696 300 Gene3D G3DSA:3.30.300.20 189 292 2.0E-33 T 19-04-2016 IPR015946 K homology domain-like, alpha/beta APA12_RS03280 eaa9643c1d210966dca716fe3c244696 300 Gene3D G3DSA:3.40.50.300 6 173 3.0E-45 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS03280 eaa9643c1d210966dca716fe3c244696 300 Hamap MF_00367 GTPase Era [era]. 6 296 31.865 T 19-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 APA12_RS03280 eaa9643c1d210966dca716fe3c244696 300 PANTHER PTHR11649:SF3 6 298 8.7E-113 T 19-04-2016 APA12_RS03280 eaa9643c1d210966dca716fe3c244696 300 Pfam PF07650 KH domain 208 280 2.7E-14 T 19-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 APA12_RS03280 eaa9643c1d210966dca716fe3c244696 300 PANTHER PTHR11649 6 298 8.7E-113 T 19-04-2016 APA12_RS13820 3b0ef15584a8d5f49591773afc0850ae 198 PANTHER PTHR13693 25 198 6.3E-63 T 19-04-2016 APA12_RS13820 3b0ef15584a8d5f49591773afc0850ae 198 Pfam PF00155 Aminotransferase class I and II 76 198 1.2E-18 T 19-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APA12_RS13820 3b0ef15584a8d5f49591773afc0850ae 198 PANTHER PTHR13693:SF57 25 198 6.3E-63 T 19-04-2016 APA12_RS13820 3b0ef15584a8d5f49591773afc0850ae 198 SUPERFAMILY SSF53383 29 198 3.33E-33 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APA12_RS13820 3b0ef15584a8d5f49591773afc0850ae 198 Gene3D G3DSA:3.40.640.10 94 198 6.8E-31 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APA12_RS08825 4c6e4ff7991f6c45bc96f46e83f17059 202 SUPERFAMILY SSF46609 1 90 1.17E-30 T 19-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APA12_RS08825 4c6e4ff7991f6c45bc96f46e83f17059 202 PANTHER PTHR11404:SF8 1 202 1.5E-94 T 19-04-2016 APA12_RS08825 4c6e4ff7991f6c45bc96f46e83f17059 202 PIRSF PIRSF000349 1 202 9.2E-74 T 19-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APA12_RS08825 4c6e4ff7991f6c45bc96f46e83f17059 202 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 97 197 6.7E-34 T 19-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APA12_RS08825 4c6e4ff7991f6c45bc96f46e83f17059 202 Gene3D G3DSA:1.10.287.990 23 89 1.8E-26 T 19-04-2016 APA12_RS08825 4c6e4ff7991f6c45bc96f46e83f17059 202 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 164 171 - T 19-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APA12_RS08825 4c6e4ff7991f6c45bc96f46e83f17059 202 SUPERFAMILY SSF54719 91 201 5.76E-39 T 19-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APA12_RS08825 4c6e4ff7991f6c45bc96f46e83f17059 202 PANTHER PTHR11404 1 202 1.5E-94 T 19-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APA12_RS08825 4c6e4ff7991f6c45bc96f46e83f17059 202 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 89 7.1E-27 T 19-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APA12_RS08825 4c6e4ff7991f6c45bc96f46e83f17059 202 PRINTS PR01703 Manganese superoxide dismutase signature 162 174 2.1E-21 T 19-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APA12_RS08825 4c6e4ff7991f6c45bc96f46e83f17059 202 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 2.1E-21 T 19-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APA12_RS08825 4c6e4ff7991f6c45bc96f46e83f17059 202 PRINTS PR01703 Manganese superoxide dismutase signature 28 41 2.1E-21 T 19-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APA12_RS08825 4c6e4ff7991f6c45bc96f46e83f17059 202 PRINTS PR01703 Manganese superoxide dismutase signature 72 85 2.1E-21 T 19-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APA12_RS08825 4c6e4ff7991f6c45bc96f46e83f17059 202 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 2.1E-21 T 19-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APA12_RS10470 f7177bc9479553ba80099e6a5adc5513 289 Pfam PF05726 Pirin C-terminal cupin domain 184 285 1.9E-29 T 19-04-2016 IPR008778 Pirin, C-terminal domain APA12_RS10470 f7177bc9479553ba80099e6a5adc5513 289 Pfam PF02678 Pirin 23 128 5.9E-33 T 19-04-2016 IPR003829 Pirin, N-terminal domain APA12_RS10470 f7177bc9479553ba80099e6a5adc5513 289 PANTHER PTHR13903:SF12 3 285 7.4E-151 T 19-04-2016 APA12_RS10470 f7177bc9479553ba80099e6a5adc5513 289 PANTHER PTHR13903 3 285 7.4E-151 T 19-04-2016 IPR012093 Pirin APA12_RS10470 f7177bc9479553ba80099e6a5adc5513 289 PIRSF PIRSF006232 3 289 1.6E-87 T 19-04-2016 IPR012093 Pirin APA12_RS10470 f7177bc9479553ba80099e6a5adc5513 289 Gene3D G3DSA:2.60.120.10 13 258 1.6E-76 T 19-04-2016 IPR014710 RmlC-like jelly roll fold APA12_RS10470 f7177bc9479553ba80099e6a5adc5513 289 SUPERFAMILY SSF51182 14 287 1.01E-81 T 19-04-2016 IPR011051 RmlC-like cupin domain APA12_RS07805 e2900ecefa232b8f079b717a42160c20 187 PANTHER PTHR11102 1 143 3.8E-28 T 19-04-2016 APA12_RS07805 e2900ecefa232b8f079b717a42160c20 187 SUPERFAMILY SSF81901 2 146 2.18E-31 T 19-04-2016 APA12_RS07805 e2900ecefa232b8f079b717a42160c20 187 Gene3D G3DSA:1.25.40.10 2 152 1.2E-33 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS07805 e2900ecefa232b8f079b717a42160c20 187 SMART SM00671 80 115 4.7E-7 T 19-04-2016 IPR006597 Sel1-like repeat APA12_RS07805 e2900ecefa232b8f079b717a42160c20 187 SMART SM00671 46 79 25.0 T 19-04-2016 IPR006597 Sel1-like repeat APA12_RS07805 e2900ecefa232b8f079b717a42160c20 187 SMART SM00671 8 43 7.2E-8 T 19-04-2016 IPR006597 Sel1-like repeat APA12_RS07805 e2900ecefa232b8f079b717a42160c20 187 Pfam PF08238 Sel1 repeat 10 43 1.3E-5 T 19-04-2016 IPR006597 Sel1-like repeat APA12_RS07805 e2900ecefa232b8f079b717a42160c20 187 Pfam PF08238 Sel1 repeat 48 79 19.0 T 19-04-2016 IPR006597 Sel1-like repeat APA12_RS07805 e2900ecefa232b8f079b717a42160c20 187 Pfam PF08238 Sel1 repeat 80 115 9.9E-6 T 19-04-2016 IPR006597 Sel1-like repeat APA12_RS08435 cf19de2483a3868fbe4ef34ecc399631 432 PANTHER PTHR38442 1 429 3.9E-78 T 19-04-2016 APA12_RS08435 cf19de2483a3868fbe4ef34ecc399631 432 Pfam PF04286 Protein of unknown function (DUF445) 61 425 1.7E-77 T 19-04-2016 IPR007383 Protein of unknown function DUF445 APA12_RS05340 2596b6369c82c7b61f6090860a2dddb6 519 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 41 505 1.5E-136 T 19-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 APA12_RS05340 2596b6369c82c7b61f6090860a2dddb6 519 PANTHER PTHR30081 27 91 3.1E-133 T 19-04-2016 APA12_RS05340 2596b6369c82c7b61f6090860a2dddb6 519 PANTHER PTHR30081 235 513 3.1E-133 T 19-04-2016 APA12_RS05340 2596b6369c82c7b61f6090860a2dddb6 519 PANTHER PTHR30081 147 205 3.1E-133 T 19-04-2016 APA12_RS05340 2596b6369c82c7b61f6090860a2dddb6 519 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 268 498 2.2E-80 T 19-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APA12_RS05340 2596b6369c82c7b61f6090860a2dddb6 519 PANTHER PTHR30081:SF1 27 91 3.1E-133 T 19-04-2016 APA12_RS05340 2596b6369c82c7b61f6090860a2dddb6 519 PANTHER PTHR30081:SF1 235 513 3.1E-133 T 19-04-2016 APA12_RS05340 2596b6369c82c7b61f6090860a2dddb6 519 PANTHER PTHR30081:SF1 147 205 3.1E-133 T 19-04-2016 APA12_RS05340 2596b6369c82c7b61f6090860a2dddb6 519 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 518 41.409 T 19-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 APA12_RS05340 2596b6369c82c7b61f6090860a2dddb6 519 Pfam PF02355 Protein export membrane protein 340 509 2.3E-20 T 19-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial APA12_RS05340 2596b6369c82c7b61f6090860a2dddb6 519 Gene3D G3DSA:1.20.1640.10 328 513 2.6E-26 T 19-04-2016 APA12_RS05340 2596b6369c82c7b61f6090860a2dddb6 519 Pfam PF07549 SecD/SecF GG Motif 37 56 3.7E-4 T 19-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site APA12_RS05340 2596b6369c82c7b61f6090860a2dddb6 519 SUPERFAMILY SSF82866 315 512 2.35E-42 T 19-04-2016 APA12_RS06000 e5d1e1d57bdaa8a3594d552448142a87 244 Pfam PF02348 Cytidylyltransferase 6 217 4.4E-35 T 19-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 APA12_RS06000 e5d1e1d57bdaa8a3594d552448142a87 244 Gene3D G3DSA:3.90.550.10 5 242 1.3E-63 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS06000 e5d1e1d57bdaa8a3594d552448142a87 244 SUPERFAMILY SSF53448 5 242 2.11E-49 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS06000 e5d1e1d57bdaa8a3594d552448142a87 244 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 3 236 5.6E-48 T 19-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 APA12_RS06000 e5d1e1d57bdaa8a3594d552448142a87 244 PANTHER PTHR21485:SF4 5 240 2.0E-76 T 19-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 APA12_RS06000 e5d1e1d57bdaa8a3594d552448142a87 244 PANTHER PTHR21485 5 240 2.0E-76 T 19-04-2016 APA12_RS06750 0ee95eaae41a01d69e14e7af7d70584d 193 Gene3D G3DSA:1.10.357.10 12 172 3.2E-20 T 19-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APA12_RS06750 0ee95eaae41a01d69e14e7af7d70584d 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 62 3.6E-13 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APA12_RS06750 0ee95eaae41a01d69e14e7af7d70584d 193 SUPERFAMILY SSF46689 6 81 2.38E-14 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS06750 0ee95eaae41a01d69e14e7af7d70584d 193 PANTHER PTHR30055:SF71 1 172 1.2E-15 T 19-04-2016 APA12_RS06750 0ee95eaae41a01d69e14e7af7d70584d 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 2.6E-8 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APA12_RS06750 0ee95eaae41a01d69e14e7af7d70584d 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 2.6E-8 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APA12_RS06750 0ee95eaae41a01d69e14e7af7d70584d 193 PANTHER PTHR30055 1 172 1.2E-15 T 19-04-2016 APA12_RS06645 f898fc5bceb0756801882dea8aa62f94 378 SUPERFAMILY SSF51395 5 374 3.66E-120 T 19-04-2016 APA12_RS06645 f898fc5bceb0756801882dea8aa62f94 378 Gene3D G3DSA:3.20.20.70 5 372 9.4E-127 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS06645 f898fc5bceb0756801882dea8aa62f94 378 PANTHER PTHR22893 1 376 2.6E-173 T 19-04-2016 APA12_RS06645 f898fc5bceb0756801882dea8aa62f94 378 PANTHER PTHR22893:SF24 1 376 2.6E-173 T 19-04-2016 APA12_RS06645 f898fc5bceb0756801882dea8aa62f94 378 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 351 8.5E-85 T 19-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 APA12_RS07235 8aa29887226d8ac505e8466916c19532 115 Pfam PF05717 IS66 Orf2 like protein 9 106 9.4E-36 T 19-04-2016 IPR008878 Transposase IS66, Orf2 APA12_RS07235 8aa29887226d8ac505e8466916c19532 115 PANTHER PTHR36455 2 105 1.8E-41 T 19-04-2016 APA12_RS07235 8aa29887226d8ac505e8466916c19532 115 PANTHER PTHR36455:SF1 2 105 1.8E-41 T 19-04-2016 APA12_RS04585 e2c2f83263f2d970272da0f5dc75c7d6 209 SUPERFAMILY SSF51004 35 183 6.02E-6 T 19-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain APA12_RS09240 1b031d18569bf6bfaf784f6a4aea66e4 463 Gene3D G3DSA:3.40.50.1110 21 218 5.9E-14 T 19-04-2016 IPR013830 SGNH hydrolase-type esterase domain APA12_RS09240 1b031d18569bf6bfaf784f6a4aea66e4 463 SUPERFAMILY SSF52266 24 199 1.22E-15 T 19-04-2016 IPR013830 SGNH hydrolase-type esterase domain APA12_RS03340 3b4e49a5fdd0f2eb31ba491b4b50d0e2 285 Pfam PF06230 Protein of unknown function (DUF1009) 59 269 5.7E-74 T 19-04-2016 IPR010415 Protein of unknown function DUF1009 APA12_RS03340 3b4e49a5fdd0f2eb31ba491b4b50d0e2 285 PANTHER PTHR39962:SF1 7 285 1.5E-58 T 19-04-2016 APA12_RS03340 3b4e49a5fdd0f2eb31ba491b4b50d0e2 285 PANTHER PTHR39962 7 285 1.5E-58 T 19-04-2016 APA12_RS02775 0a2913a3b1f839103d7a039e229e45b5 301 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 20 300 44.038 T 19-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 APA12_RS02775 0a2913a3b1f839103d7a039e229e45b5 301 Gene3D G3DSA:3.30.70.260 20 101 9.5E-24 T 19-04-2016 APA12_RS02775 0a2913a3b1f839103d7a039e229e45b5 301 Pfam PF00551 Formyl transferase 106 282 6.5E-38 T 19-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APA12_RS02775 0a2913a3b1f839103d7a039e229e45b5 301 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 24 300 6.1E-97 T 19-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 APA12_RS02775 0a2913a3b1f839103d7a039e229e45b5 301 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 252 274 6.0E-46 T 19-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 APA12_RS02775 0a2913a3b1f839103d7a039e229e45b5 301 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 25 51 6.0E-46 T 19-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 APA12_RS02775 0a2913a3b1f839103d7a039e229e45b5 301 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 128 155 6.0E-46 T 19-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 APA12_RS02775 0a2913a3b1f839103d7a039e229e45b5 301 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 106 128 6.0E-46 T 19-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 APA12_RS02775 0a2913a3b1f839103d7a039e229e45b5 301 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 274 299 6.0E-46 T 19-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 APA12_RS02775 0a2913a3b1f839103d7a039e229e45b5 301 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 57 69 6.0E-46 T 19-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 APA12_RS02775 0a2913a3b1f839103d7a039e229e45b5 301 PANTHER PTHR10520 19 294 2.6E-129 T 19-04-2016 APA12_RS02775 0a2913a3b1f839103d7a039e229e45b5 301 SUPERFAMILY SSF55021 21 102 7.25E-17 T 19-04-2016 APA12_RS02775 0a2913a3b1f839103d7a039e229e45b5 301 SUPERFAMILY SSF53328 106 300 5.36E-58 T 19-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APA12_RS02775 0a2913a3b1f839103d7a039e229e45b5 301 Pfam PF13740 ACT domain 22 98 6.6E-9 T 19-04-2016 APA12_RS02775 0a2913a3b1f839103d7a039e229e45b5 301 PIRSF PIRSF036480 20 301 9.9E-104 T 19-04-2016 APA12_RS02775 0a2913a3b1f839103d7a039e229e45b5 301 PANTHER PTHR10520:SF7 19 294 2.6E-129 T 19-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 APA12_RS02775 0a2913a3b1f839103d7a039e229e45b5 301 Gene3D G3DSA:3.40.50.170 106 296 2.9E-54 T 19-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APA12_RS02665 7ffbf1542f865b8a0f7e3d517c2120a4 384 Pfam PF11863 Protein of unknown function (DUF3383) 94 379 1.6E-55 T 19-04-2016 IPR021808 Protein of unknown function DUF3383 APA12_RS02665 7ffbf1542f865b8a0f7e3d517c2120a4 384 Pfam PF11863 Protein of unknown function (DUF3383) 5 82 1.4E-11 T 19-04-2016 IPR021808 Protein of unknown function DUF3383 APA12_RS04250 05b66d1908c70b69e95cbe7b1e3dcc22 275 SUPERFAMILY SSF53098 113 269 3.79E-40 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS04250 05b66d1908c70b69e95cbe7b1e3dcc22 275 Gene3D G3DSA:3.30.420.10 113 268 6.4E-49 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS04250 05b66d1908c70b69e95cbe7b1e3dcc22 275 PANTHER PTHR32552 47 268 8.3E-68 T 19-04-2016 APA12_RS04250 05b66d1908c70b69e95cbe7b1e3dcc22 275 PANTHER PTHR32552:SF26 47 268 8.3E-68 T 19-04-2016 APA12_RS04250 05b66d1908c70b69e95cbe7b1e3dcc22 275 Pfam PF00665 Integrase core domain 118 230 3.1E-27 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APA12_RS12770 53d94a37b1047ea15d4c9213a1a5f0a3 197 Gene3D G3DSA:2.40.40.10 104 155 7.1E-5 T 19-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain APA12_RS12770 53d94a37b1047ea15d4c9213a1a5f0a3 197 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 69 158 4.4E-36 T 19-04-2016 IPR012997 Rare lipoprotein A APA12_RS12770 53d94a37b1047ea15d4c9213a1a5f0a3 197 SUPERFAMILY SSF50685 67 155 1.26E-10 T 19-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain APA12_RS12770 53d94a37b1047ea15d4c9213a1a5f0a3 197 PANTHER PTHR34183 60 158 7.6E-45 T 19-04-2016 APA12_RS12770 53d94a37b1047ea15d4c9213a1a5f0a3 197 Pfam PF03330 Lytic transglycolase 68 156 4.6E-25 T 19-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain APA12_RS10555 77257a62bf321eef2c23606d1bd5c922 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.0E-6 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS10555 77257a62bf321eef2c23606d1bd5c922 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.0E-6 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS10555 77257a62bf321eef2c23606d1bd5c922 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.0E-6 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS10555 77257a62bf321eef2c23606d1bd5c922 313 Gene3D G3DSA:3.40.190.10 91 175 2.6E-10 T 19-04-2016 APA12_RS10555 77257a62bf321eef2c23606d1bd5c922 313 Gene3D G3DSA:1.10.10.10 2 84 8.2E-25 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS10555 77257a62bf321eef2c23606d1bd5c922 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.8E-18 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS10555 77257a62bf321eef2c23606d1bd5c922 313 SUPERFAMILY SSF53850 89 302 5.97E-33 T 19-04-2016 APA12_RS10555 77257a62bf321eef2c23606d1bd5c922 313 PANTHER PTHR30293 1 313 2.5E-101 T 19-04-2016 APA12_RS10555 77257a62bf321eef2c23606d1bd5c922 313 PANTHER PTHR30293:SF0 1 313 2.5E-101 T 19-04-2016 APA12_RS10555 77257a62bf321eef2c23606d1bd5c922 313 SUPERFAMILY SSF46785 1 100 1.72E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS10555 77257a62bf321eef2c23606d1bd5c922 313 Pfam PF03466 LysR substrate binding domain 88 290 3.7E-31 T 19-04-2016 IPR005119 LysR, substrate-binding APA12_RS10555 77257a62bf321eef2c23606d1bd5c922 313 Gene3D G3DSA:3.40.190.10 176 267 6.7E-17 T 19-04-2016 APA12_RS13315 0584aad4af4d7783625bc6172a6613f8 249 SUPERFAMILY SSF75625 3 246 2.49E-93 T 19-04-2016 IPR029072 YebC-like APA12_RS13315 0584aad4af4d7783625bc6172a6613f8 249 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 34.664 T 19-04-2016 IPR002876 Transcriptional regulator TACO1-like APA12_RS13315 0584aad4af4d7783625bc6172a6613f8 249 Gene3D G3DSA:3.30.1270.10 82 134 5.3E-39 T 19-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 APA12_RS13315 0584aad4af4d7783625bc6172a6613f8 249 Gene3D G3DSA:3.30.1270.10 212 247 5.3E-39 T 19-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 APA12_RS13315 0584aad4af4d7783625bc6172a6613f8 249 Gene3D G3DSA:3.30.70.980 135 205 4.8E-24 T 19-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 APA12_RS13315 0584aad4af4d7783625bc6172a6613f8 249 Gene3D G3DSA:1.10.10.200 1 79 1.5E-33 T 19-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like APA12_RS13315 0584aad4af4d7783625bc6172a6613f8 249 PANTHER PTHR12532 1 241 3.3E-109 T 19-04-2016 IPR002876 Transcriptional regulator TACO1-like APA12_RS13315 0584aad4af4d7783625bc6172a6613f8 249 Pfam PF01709 Transcriptional regulator 5 237 1.1E-92 T 19-04-2016 IPR002876 Transcriptional regulator TACO1-like APA12_RS13315 0584aad4af4d7783625bc6172a6613f8 249 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 3.4E-97 T 19-04-2016 IPR002876 Transcriptional regulator TACO1-like APA12_RS10010 8e1f89028d61559d89dc8a71e6b3ddec 409 SUPERFAMILY SSF53756 11 385 4.0E-81 T 19-04-2016 APA12_RS10010 8e1f89028d61559d89dc8a71e6b3ddec 409 Pfam PF13439 Glycosyltransferase Family 4 20 176 9.7E-27 T 19-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APA12_RS10010 8e1f89028d61559d89dc8a71e6b3ddec 409 Pfam PF00534 Glycosyl transferases group 1 195 361 2.1E-32 T 19-04-2016 IPR001296 Glycosyl transferase, family 1 APA12_RS10010 8e1f89028d61559d89dc8a71e6b3ddec 409 PANTHER PTHR12526 13 385 3.5E-64 T 19-04-2016 APA12_RS10010 8e1f89028d61559d89dc8a71e6b3ddec 409 Gene3D G3DSA:3.40.50.2000 156 360 1.0E-33 T 19-04-2016 APA12_RS10970 84818384419d6f340a582fbd5f4a79a4 420 SUPERFAMILY SSF55031 218 334 1.27E-29 T 19-04-2016 IPR011650 Peptidase M20, dimerisation domain APA12_RS10970 84818384419d6f340a582fbd5f4a79a4 420 Pfam PF07687 Peptidase dimerisation domain 215 317 3.1E-7 T 19-04-2016 IPR011650 Peptidase M20, dimerisation domain APA12_RS10970 84818384419d6f340a582fbd5f4a79a4 420 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 16 412 2.5E-136 T 19-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 APA12_RS10970 84818384419d6f340a582fbd5f4a79a4 420 SUPERFAMILY SSF53187 6 228 7.14E-94 T 19-04-2016 APA12_RS10970 84818384419d6f340a582fbd5f4a79a4 420 SUPERFAMILY SSF53187 341 413 7.14E-94 T 19-04-2016 APA12_RS10970 84818384419d6f340a582fbd5f4a79a4 420 PANTHER PTHR32494 9 420 2.9E-174 T 19-04-2016 APA12_RS10970 84818384419d6f340a582fbd5f4a79a4 420 Pfam PF01546 Peptidase family M20/M25/M40 86 411 6.4E-37 T 19-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APA12_RS10970 84818384419d6f340a582fbd5f4a79a4 420 Gene3D G3DSA:3.40.630.10 356 414 1.4E-117 T 19-04-2016 APA12_RS10970 84818384419d6f340a582fbd5f4a79a4 420 Gene3D G3DSA:3.40.630.10 7 230 1.4E-117 T 19-04-2016 APA12_RS10970 84818384419d6f340a582fbd5f4a79a4 420 PIRSF PIRSF001235 10 418 2.4E-137 T 19-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 APA12_RS10970 84818384419d6f340a582fbd5f4a79a4 420 Gene3D G3DSA:3.30.70.360 231 330 7.2E-40 T 19-04-2016 IPR011650 Peptidase M20, dimerisation domain APA12_RS11170 f050b08cb49978e497207526376adbc8 322 Pfam PF02558 Ketopantoate reductase PanE/ApbA 4 169 3.9E-16 T 19-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 APA12_RS11170 f050b08cb49978e497207526376adbc8 322 SUPERFAMILY SSF48179 196 315 2.45E-14 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APA12_RS11170 f050b08cb49978e497207526376adbc8 322 SUPERFAMILY SSF51735 3 185 7.35E-7 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS11170 f050b08cb49978e497207526376adbc8 322 Gene3D G3DSA:1.10.1040.10 196 316 9.4E-16 T 19-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APA12_RS11170 f050b08cb49978e497207526376adbc8 322 Gene3D G3DSA:3.40.50.720 2 179 4.7E-33 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS11170 f050b08cb49978e497207526376adbc8 322 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 196 316 9.2E-16 T 19-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 APA12_RS11170 f050b08cb49978e497207526376adbc8 322 PANTHER PTHR21708 138 321 4.3E-31 T 19-04-2016 APA12_RS11170 f050b08cb49978e497207526376adbc8 322 PANTHER PTHR21708 1 121 4.3E-31 T 19-04-2016 APA12_RS03500 bc6d50449f1ac3abf5429c966ba120f4 805 SUPERFAMILY SSF50182 640 704 6.54E-16 T 19-04-2016 IPR010920 LSM domain APA12_RS03500 bc6d50449f1ac3abf5429c966ba120f4 805 Pfam PF12607 Protein of unknown function (DUF3772) 159 216 4.0E-8 T 19-04-2016 IPR022249 Domain of unknown function DUF3772 APA12_RS03500 bc6d50449f1ac3abf5429c966ba120f4 805 Pfam PF00924 Mechanosensitive ion channel 598 794 7.4E-42 T 19-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 APA12_RS03500 bc6d50449f1ac3abf5429c966ba120f4 805 Gene3D G3DSA:3.30.70.100 715 794 2.0E-5 T 19-04-2016 APA12_RS03500 bc6d50449f1ac3abf5429c966ba120f4 805 PANTHER PTHR30347 133 805 1.6E-58 T 19-04-2016 APA12_RS03500 bc6d50449f1ac3abf5429c966ba120f4 805 PANTHER PTHR30347:SF3 133 805 1.6E-58 T 19-04-2016 APA12_RS03500 bc6d50449f1ac3abf5429c966ba120f4 805 SUPERFAMILY SSF82861 556 638 1.27E-9 T 19-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 APA12_RS03500 bc6d50449f1ac3abf5429c966ba120f4 805 Gene3D G3DSA:2.30.30.60 655 703 1.6E-16 T 19-04-2016 APA12_RS03500 bc6d50449f1ac3abf5429c966ba120f4 805 SUPERFAMILY SSF82689 713 796 2.48E-7 T 19-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 APA12_RS02200 59b29bb9592b49fef3062df03784e67e 563 SUPERFAMILY SSF51126 9 247 1.35E-7 T 19-04-2016 IPR011050 Pectin lyase fold/virulence factor APA12_RS02200 59b29bb9592b49fef3062df03784e67e 563 Gene3D G3DSA:2.170.16.10 216 365 1.1E-6 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS02200 59b29bb9592b49fef3062df03784e67e 563 SUPERFAMILY SSF51294 216 353 3.14E-10 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS02200 59b29bb9592b49fef3062df03784e67e 563 Pfam PF13403 Hint domain 215 356 9.6E-43 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS07740 c219bfbc4c58cb213adf167c33aebbad 173 Gene3D G3DSA:1.20.1260.10 59 161 2.3E-6 T 19-04-2016 IPR012347 Ferritin-related APA12_RS07740 c219bfbc4c58cb213adf167c33aebbad 173 Pfam PF13628 Domain of unknown function (DUF4142) 37 171 3.5E-39 T 19-04-2016 IPR025419 Domain of unknown function DUF4142 APA12_RS08045 36572801cdba86e4339e6f2ccd3e5bb3 223 SUPERFAMILY SSF52172 1 176 1.96E-33 T 19-04-2016 IPR011006 CheY-like superfamily APA12_RS08045 36572801cdba86e4339e6f2ccd3e5bb3 223 SMART SM00448 1 112 4.0E-31 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS08045 36572801cdba86e4339e6f2ccd3e5bb3 223 PANTHER PTHR26402:SF578 1 219 1.7E-69 T 19-04-2016 APA12_RS08045 36572801cdba86e4339e6f2ccd3e5bb3 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 217 5.8E-20 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APA12_RS08045 36572801cdba86e4339e6f2ccd3e5bb3 223 PANTHER PTHR26402 1 219 1.7E-69 T 19-04-2016 APA12_RS08045 36572801cdba86e4339e6f2ccd3e5bb3 223 SMART SM00862 146 217 3.2E-20 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APA12_RS08045 36572801cdba86e4339e6f2ccd3e5bb3 223 Gene3D G3DSA:3.40.50.2300 1 121 3.9E-31 T 19-04-2016 APA12_RS08045 36572801cdba86e4339e6f2ccd3e5bb3 223 Gene3D G3DSA:1.10.10.10 125 218 1.7E-26 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS08045 36572801cdba86e4339e6f2ccd3e5bb3 223 Pfam PF00072 Response regulator receiver domain 3 112 1.6E-22 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS02885 38c9f7c054e950a7c41e73c6f4ac59ae 255 PANTHER PTHR24322 159 190 9.4E-40 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS02885 38c9f7c054e950a7c41e73c6f4ac59ae 255 PANTHER PTHR24322 7 143 9.4E-40 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS02885 38c9f7c054e950a7c41e73c6f4ac59ae 255 Gene3D G3DSA:3.40.50.720 3 251 1.4E-60 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS02885 38c9f7c054e950a7c41e73c6f4ac59ae 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 19-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APA12_RS02885 38c9f7c054e950a7c41e73c6f4ac59ae 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 7.7E-25 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS02885 38c9f7c054e950a7c41e73c6f4ac59ae 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 7.7E-25 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS02885 38c9f7c054e950a7c41e73c6f4ac59ae 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 7.7E-25 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS02885 38c9f7c054e950a7c41e73c6f4ac59ae 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 7.7E-25 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS02885 38c9f7c054e950a7c41e73c6f4ac59ae 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 7.7E-25 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS02885 38c9f7c054e950a7c41e73c6f4ac59ae 255 SUPERFAMILY SSF51735 3 252 6.36E-60 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS02885 38c9f7c054e950a7c41e73c6f4ac59ae 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 250 3.9E-45 T 19-04-2016 APA12_RS02885 38c9f7c054e950a7c41e73c6f4ac59ae 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 7.9E-6 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS02885 38c9f7c054e950a7c41e73c6f4ac59ae 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 7.9E-6 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS02885 38c9f7c054e950a7c41e73c6f4ac59ae 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 7.9E-6 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS09895 4acaea9ff5dad589e84d63c05c1a17f4 1139 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 293 721 4.2E-173 T 19-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APA12_RS09895 4acaea9ff5dad589e84d63c05c1a17f4 1139 PANTHER PTHR32294 2 1138 0.0 T 19-04-2016 APA12_RS09895 4acaea9ff5dad589e84d63c05c1a17f4 1139 PANTHER PTHR32294:SF0 2 1138 0.0 T 19-04-2016 APA12_RS09895 4acaea9ff5dad589e84d63c05c1a17f4 1139 Pfam PF02811 PHP domain 8 174 8.8E-29 T 19-04-2016 IPR004013 PHP domain GO:0003824 APA12_RS09895 4acaea9ff5dad589e84d63c05c1a17f4 1139 SUPERFAMILY SSF160975 822 862 6.8E-5 T 19-04-2016 APA12_RS09895 4acaea9ff5dad589e84d63c05c1a17f4 1139 Gene3D G3DSA:1.10.150.280 823 876 8.6E-6 T 19-04-2016 APA12_RS09895 4acaea9ff5dad589e84d63c05c1a17f4 1139 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1019 0.0 T 19-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APA12_RS09895 4acaea9ff5dad589e84d63c05c1a17f4 1139 Pfam PF01336 OB-fold nucleic acid binding domain 982 1059 9.1E-7 T 19-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 APA12_RS09895 4acaea9ff5dad589e84d63c05c1a17f4 1139 SMART SM00481 7 74 4.5E-16 T 19-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 APA12_RS09895 4acaea9ff5dad589e84d63c05c1a17f4 1139 Gene3D G3DSA:3.20.20.140 6 257 2.8E-15 T 19-04-2016 APA12_RS09895 4acaea9ff5dad589e84d63c05c1a17f4 1139 Pfam PF14579 Helix-hairpin-helix motif 796 887 1.3E-26 T 19-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APA12_RS00065 cd34d6b56301b1c98412e2448e558099 422 Gene3D G3DSA:2.130.10.10 93 410 7.4E-51 T 19-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APA12_RS00065 cd34d6b56301b1c98412e2448e558099 422 PANTHER PTHR13833 268 322 3.9E-13 T 19-04-2016 APA12_RS00065 cd34d6b56301b1c98412e2448e558099 422 PANTHER PTHR13833 54 221 3.9E-13 T 19-04-2016 APA12_RS00065 cd34d6b56301b1c98412e2448e558099 422 SUPERFAMILY SSF50974 93 408 1.78E-60 T 19-04-2016 IPR011045 Nitrous oxide reductase, N-terminal APA12_RS00065 cd34d6b56301b1c98412e2448e558099 422 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 98 134 3.3E-11 T 19-04-2016 IPR011964 YVTN beta-propeller repeat APA12_RS05945 c73ad1d5fb511478b264beb936e0b286 171 Gene3D G3DSA:3.40.50.620 7 131 8.3E-13 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS05945 c73ad1d5fb511478b264beb936e0b286 171 PANTHER PTHR30336 6 132 6.5E-14 T 19-04-2016 APA12_RS05945 c73ad1d5fb511478b264beb936e0b286 171 Pfam PF02698 DUF218 domain 6 136 7.2E-16 T 19-04-2016 IPR003848 Domain of unknown function DUF218 APA12_RS09385 1c05b169fd67418e713a75c785f710ef 336 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 6 300 6.3E-32 T 19-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD APA12_RS09385 1c05b169fd67418e713a75c785f710ef 336 TIGRFAM TIGR03476 HpnL: putative membrane protein 1 316 1.0E-78 T 19-04-2016 APA12_RS08010 6975f26f1c35a254f690a7cf3fb6a649 275 PANTHER PTHR32552:SF26 47 268 4.4E-68 T 19-04-2016 APA12_RS08010 6975f26f1c35a254f690a7cf3fb6a649 275 Gene3D G3DSA:3.30.420.10 113 268 6.1E-49 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS08010 6975f26f1c35a254f690a7cf3fb6a649 275 SUPERFAMILY SSF53098 113 269 1.77E-39 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS08010 6975f26f1c35a254f690a7cf3fb6a649 275 Pfam PF00665 Integrase core domain 118 230 2.1E-26 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APA12_RS08010 6975f26f1c35a254f690a7cf3fb6a649 275 PANTHER PTHR32552 47 268 4.4E-68 T 19-04-2016 APA12_RS00650 a763a761bf36abf631b5a3b125fbae45 345 Pfam PF00005 ABC transporter 20 166 1.0E-32 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS00650 a763a761bf36abf631b5a3b125fbae45 345 Gene3D G3DSA:3.40.50.300 11 240 1.5E-72 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS00650 a763a761bf36abf631b5a3b125fbae45 345 PANTHER PTHR24220:SF123 4 283 9.3E-103 T 19-04-2016 APA12_RS00650 a763a761bf36abf631b5a3b125fbae45 345 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APA12_RS00650 a763a761bf36abf631b5a3b125fbae45 345 SUPERFAMILY SSF52540 14 242 1.12E-74 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS00650 a763a761bf36abf631b5a3b125fbae45 345 SMART SM00382 29 216 9.9E-18 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS00650 a763a761bf36abf631b5a3b125fbae45 345 PANTHER PTHR24220 4 283 9.3E-103 T 19-04-2016 APA12_RS01000 5aeed93d4132c47164427dbc5f3a701f 398 PANTHER PTHR10859:SF75 23 392 3.1E-79 T 19-04-2016 APA12_RS01000 5aeed93d4132c47164427dbc5f3a701f 398 TIGRFAM TIGR03469 HpnB: hopene-associated glycosyltransferase HpnB 3 381 1.1E-149 T 19-04-2016 IPR017832 Glycosyl transferase, family 2, hopene-associated, HpnB APA12_RS01000 5aeed93d4132c47164427dbc5f3a701f 398 Gene3D G3DSA:3.90.550.10 44 250 1.1E-20 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS01000 5aeed93d4132c47164427dbc5f3a701f 398 Pfam PF00535 Glycosyl transferase family 2 47 226 2.9E-16 T 19-04-2016 IPR001173 Glycosyltransferase 2-like APA12_RS01000 5aeed93d4132c47164427dbc5f3a701f 398 SUPERFAMILY SSF53448 38 287 7.22E-30 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS01000 5aeed93d4132c47164427dbc5f3a701f 398 PANTHER PTHR10859 23 392 3.1E-79 T 19-04-2016 APA12_RS02990 bf0a85d84d319815496deeb34009550a 537 PANTHER PTHR11101 49 536 5.8E-203 T 19-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 APA12_RS02990 bf0a85d84d319815496deeb34009550a 537 PANTHER PTHR11101:SF61 49 536 5.8E-203 T 19-04-2016 APA12_RS02990 bf0a85d84d319815496deeb34009550a 537 Pfam PF01384 Phosphate transporter family 77 526 5.7E-73 T 19-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 APA12_RS06710 d36da7e4d30949f8d8ec322314d542e0 567 SMART SM00382 393 564 7.4E-15 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS06710 d36da7e4d30949f8d8ec322314d542e0 567 Gene3D G3DSA:1.20.1560.10 29 346 1.5E-11 T 19-04-2016 APA12_RS06710 d36da7e4d30949f8d8ec322314d542e0 567 SUPERFAMILY SSF52540 361 565 5.72E-41 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS06710 d36da7e4d30949f8d8ec322314d542e0 567 Gene3D G3DSA:3.40.50.300 370 564 1.1E-41 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS06710 d36da7e4d30949f8d8ec322314d542e0 567 PANTHER PTHR11384:SF3 16 566 5.7E-137 T 19-04-2016 APA12_RS06710 d36da7e4d30949f8d8ec322314d542e0 567 Pfam PF06472 ABC transporter transmembrane region 2 19 300 4.4E-51 T 19-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APA12_RS06710 d36da7e4d30949f8d8ec322314d542e0 567 SUPERFAMILY SSF90123 29 346 4.45E-23 T 19-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APA12_RS06710 d36da7e4d30949f8d8ec322314d542e0 567 PANTHER PTHR11384 16 566 5.7E-137 T 19-04-2016 APA12_RS06710 d36da7e4d30949f8d8ec322314d542e0 567 Pfam PF00005 ABC transporter 388 518 4.8E-19 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS06710 d36da7e4d30949f8d8ec322314d542e0 567 ProSitePatterns PS00211 ABC transporters family signature. 490 504 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APA12_RS02810 8ed33ad656a9b8167d493997851979a0 146 PANTHER PTHR11049:SF5 4 132 3.5E-43 T 19-04-2016 APA12_RS02810 8ed33ad656a9b8167d493997851979a0 146 SUPERFAMILY SSF54637 12 135 2.4E-34 T 19-04-2016 IPR029069 HotDog domain APA12_RS02810 8ed33ad656a9b8167d493997851979a0 146 Gene3D G3DSA:3.10.129.10 15 136 5.8E-34 T 19-04-2016 IPR029069 HotDog domain APA12_RS02810 8ed33ad656a9b8167d493997851979a0 146 Pfam PF03061 Thioesterase superfamily 29 99 2.9E-15 T 19-04-2016 IPR006683 Thioesterase domain APA12_RS02810 8ed33ad656a9b8167d493997851979a0 146 PANTHER PTHR11049 4 132 3.5E-43 T 19-04-2016 APA12_RS00625 9655b942a2fb64ae20b7f9bbdfc044e3 402 Gene3D G3DSA:3.30.420.10 13 193 1.9E-16 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS00625 9655b942a2fb64ae20b7f9bbdfc044e3 402 SMART SM00474 12 181 9.2E-34 T 19-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 APA12_RS00625 9655b942a2fb64ae20b7f9bbdfc044e3 402 SUPERFAMILY SSF47819 201 306 9.35E-22 T 19-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 APA12_RS00625 9655b942a2fb64ae20b7f9bbdfc044e3 402 TIGRFAM TIGR01388 rnd: ribonuclease D 14 373 2.8E-110 T 19-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 APA12_RS00625 9655b942a2fb64ae20b7f9bbdfc044e3 402 SUPERFAMILY SSF53098 11 214 2.66E-63 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS00625 9655b942a2fb64ae20b7f9bbdfc044e3 402 SUPERFAMILY SSF47819 315 381 8.04E-12 T 19-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 APA12_RS00625 9655b942a2fb64ae20b7f9bbdfc044e3 402 Pfam PF01612 3'-5' exonuclease 14 181 5.5E-36 T 19-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 APA12_RS00625 9655b942a2fb64ae20b7f9bbdfc044e3 402 Hamap MF_01899 Ribonuclease D [rnd]. 12 378 44.554 T 19-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 APA12_RS00625 9655b942a2fb64ae20b7f9bbdfc044e3 402 SMART SM00341 219 300 1.5E-9 T 19-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 APA12_RS00625 9655b942a2fb64ae20b7f9bbdfc044e3 402 Pfam PF00570 HRDC domain 223 290 1.2E-14 T 19-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 APA12_RS00625 9655b942a2fb64ae20b7f9bbdfc044e3 402 Gene3D G3DSA:1.10.150.80 230 275 1.5E-4 T 19-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 APA12_RS00625 9655b942a2fb64ae20b7f9bbdfc044e3 402 PANTHER PTHR12124 8 315 1.5E-57 T 19-04-2016 APA12_RS10120 5f04d57cd8d0a09821c50d66c487e77a 61 SUPERFAMILY SSF57716 5 56 4.85E-17 T 19-04-2016 APA12_RS10120 5f04d57cd8d0a09821c50d66c487e77a 61 PANTHER PTHR36150 1 60 1.6E-15 T 19-04-2016 APA12_RS10120 5f04d57cd8d0a09821c50d66c487e77a 61 PANTHER PTHR36150:SF1 1 60 1.6E-15 T 19-04-2016 APA12_RS10120 5f04d57cd8d0a09821c50d66c487e77a 61 Pfam PF03884 Domain of unknown function (DUF329) 7 51 1.4E-17 T 19-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 APA12_RS10120 5f04d57cd8d0a09821c50d66c487e77a 61 Gene3D G3DSA:3.30.50.10 4 56 1.9E-22 T 19-04-2016 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 APA12_RS10120 5f04d57cd8d0a09821c50d66c487e77a 61 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 2 60 17.306 T 19-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 APA12_RS08050 e576e93bc468806bf70625fa8347aeaa 1024 SUPERFAMILY SSF82693 42 120 3.87E-18 T 19-04-2016 APA12_RS08050 e576e93bc468806bf70625fa8347aeaa 1024 SUPERFAMILY SSF82866 296 491 1.31E-30 T 19-04-2016 APA12_RS08050 e576e93bc468806bf70625fa8347aeaa 1024 SUPERFAMILY SSF82714 711 796 2.22E-9 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APA12_RS08050 e576e93bc468806bf70625fa8347aeaa 1024 Gene3D G3DSA:3.30.2090.10 713 799 8.8E-11 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APA12_RS08050 e576e93bc468806bf70625fa8347aeaa 1024 PRINTS PR00702 Acriflavin resistance protein family signature 539 556 9.3E-21 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS08050 e576e93bc468806bf70625fa8347aeaa 1024 PRINTS PR00702 Acriflavin resistance protein family signature 466 489 9.3E-21 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS08050 e576e93bc468806bf70625fa8347aeaa 1024 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 9.3E-21 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS08050 e576e93bc468806bf70625fa8347aeaa 1024 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 9.3E-21 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS08050 e576e93bc468806bf70625fa8347aeaa 1024 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 9.3E-21 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS08050 e576e93bc468806bf70625fa8347aeaa 1024 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 9.3E-21 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS08050 e576e93bc468806bf70625fa8347aeaa 1024 PRINTS PR00702 Acriflavin resistance protein family signature 441 464 9.3E-21 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS08050 e576e93bc468806bf70625fa8347aeaa 1024 SUPERFAMILY SSF82693 138 183 4.71E-14 T 19-04-2016 APA12_RS08050 e576e93bc468806bf70625fa8347aeaa 1024 SUPERFAMILY SSF82693 270 324 4.71E-14 T 19-04-2016 APA12_RS08050 e576e93bc468806bf70625fa8347aeaa 1024 Gene3D G3DSA:3.30.2090.10 186 267 1.2E-15 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APA12_RS08050 e576e93bc468806bf70625fa8347aeaa 1024 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 4 1020 5.0E-271 T 19-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 APA12_RS08050 e576e93bc468806bf70625fa8347aeaa 1024 PANTHER PTHR32063 3 1024 0.0 T 19-04-2016 APA12_RS08050 e576e93bc468806bf70625fa8347aeaa 1024 Pfam PF00873 AcrB/AcrD/AcrF family 15 1016 3.7E-238 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS08050 e576e93bc468806bf70625fa8347aeaa 1024 Gene3D G3DSA:1.10.3850.10 803 1020 2.0E-53 T 19-04-2016 APA12_RS08050 e576e93bc468806bf70625fa8347aeaa 1024 Gene3D G3DSA:1.10.3850.10 277 493 2.3E-47 T 19-04-2016 APA12_RS08050 e576e93bc468806bf70625fa8347aeaa 1024 Gene3D G3DSA:3.30.70.1430 42 120 1.4E-20 T 19-04-2016 APA12_RS08050 e576e93bc468806bf70625fa8347aeaa 1024 SUPERFAMILY SSF82714 186 267 2.22E-13 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APA12_RS08050 e576e93bc468806bf70625fa8347aeaa 1024 PANTHER PTHR32063:SF24 3 1024 0.0 T 19-04-2016 APA12_RS08050 e576e93bc468806bf70625fa8347aeaa 1024 SUPERFAMILY SSF82866 797 1019 6.02E-49 T 19-04-2016 APA12_RS06755 2e5cc7f6dfc5566824a28ab34a9b66d5 476 Pfam PF10009 Uncharacterized protein conserved in bacteria (DUF2252) 57 455 4.2E-129 T 19-04-2016 IPR018721 Protein of unknown function DUF2252 APA12_RS06755 2e5cc7f6dfc5566824a28ab34a9b66d5 476 PANTHER PTHR39441 372 466 2.1E-82 T 19-04-2016 APA12_RS06755 2e5cc7f6dfc5566824a28ab34a9b66d5 476 PANTHER PTHR39441 9 352 2.1E-82 T 19-04-2016 APA12_RS09085 407f98f1ef96166571c6de0bd34dd242 275 PANTHER PTHR32552:SF26 47 268 3.1E-68 T 19-04-2016 APA12_RS09085 407f98f1ef96166571c6de0bd34dd242 275 Pfam PF00665 Integrase core domain 118 230 8.3E-27 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APA12_RS09085 407f98f1ef96166571c6de0bd34dd242 275 SUPERFAMILY SSF53098 113 269 2.91E-39 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS09085 407f98f1ef96166571c6de0bd34dd242 275 PANTHER PTHR32552 47 268 3.1E-68 T 19-04-2016 APA12_RS09085 407f98f1ef96166571c6de0bd34dd242 275 Gene3D G3DSA:3.30.420.10 113 268 9.0E-48 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS09950 49a4ec0ace0a7129821f7b8950a56053 220 Gene3D G3DSA:3.40.1410.10 41 218 3.4E-27 T 19-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain APA12_RS09950 49a4ec0ace0a7129821f7b8950a56053 220 SUPERFAMILY SSF64288 36 208 2.83E-22 T 19-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain APA12_RS05120 6ecb990cb8db290044ba3f8e689db054 291 PANTHER PTHR33281 15 283 3.3E-54 T 19-04-2016 APA12_RS05120 6ecb990cb8db290044ba3f8e689db054 291 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 14 267 4.4E-32 T 19-04-2016 IPR021134 Bestrophin/UPF0187 APA12_RS05120 6ecb990cb8db290044ba3f8e689db054 291 PANTHER PTHR33281:SF3 15 283 3.3E-54 T 19-04-2016 APA12_RS02250 1f58e3b86ca6b01a41d699685d137b81 182 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 152 170 1.3E-6 T 19-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 APA12_RS02250 1f58e3b86ca6b01a41d699685d137b81 182 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 56 72 1.3E-6 T 19-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 APA12_RS02250 1f58e3b86ca6b01a41d699685d137b81 182 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 80 96 1.3E-6 T 19-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 APA12_RS02250 1f58e3b86ca6b01a41d699685d137b81 182 PANTHER PTHR30295 14 170 9.1E-54 T 19-04-2016 APA12_RS02250 1f58e3b86ca6b01a41d699685d137b81 182 PANTHER PTHR30295:SF6 14 170 9.1E-54 T 19-04-2016 APA12_RS02250 1f58e3b86ca6b01a41d699685d137b81 182 Pfam PF00210 Ferritin-like domain 38 170 1.3E-24 T 19-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 APA12_RS02250 1f58e3b86ca6b01a41d699685d137b81 182 Gene3D G3DSA:1.20.1260.10 11 170 9.8E-54 T 19-04-2016 IPR012347 Ferritin-related APA12_RS02250 1f58e3b86ca6b01a41d699685d137b81 182 PIRSF PIRSF005900 13 177 5.4E-46 T 19-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 APA12_RS02250 1f58e3b86ca6b01a41d699685d137b81 182 SUPERFAMILY SSF47240 17 172 3.94E-42 T 19-04-2016 IPR009078 Ferritin-like superfamily APA12_RS00280 5cf9bcafa8838aff098a5375c4da9210 133 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 15 128 2.7E-23 T 19-04-2016 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APA12_RS00280 5cf9bcafa8838aff098a5375c4da9210 133 Pfam PF02152 Dihydroneopterin aldolase 16 127 1.2E-25 T 19-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APA12_RS00280 5cf9bcafa8838aff098a5375c4da9210 133 SMART SM00905 16 128 1.7E-28 T 19-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APA12_RS00280 5cf9bcafa8838aff098a5375c4da9210 133 SUPERFAMILY SSF55620 13 129 2.72E-26 T 19-04-2016 APA12_RS00280 5cf9bcafa8838aff098a5375c4da9210 133 TIGRFAM TIGR00526 folB_dom: FolB domain 15 130 3.7E-21 T 19-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APA12_RS00280 5cf9bcafa8838aff098a5375c4da9210 133 Gene3D G3DSA:3.30.1130.10 14 129 6.3E-34 T 19-04-2016 APA12_RS09615 8d69b20d64f34630fd740b6245f183b9 489 SUPERFAMILY SSF53244 336 483 4.12E-42 T 19-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APA12_RS09615 8d69b20d64f34630fd740b6245f183b9 489 Gene3D G3DSA:3.40.1390.10 18 97 3.9E-21 T 19-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APA12_RS09615 8d69b20d64f34630fd740b6245f183b9 489 Gene3D G3DSA:3.40.1190.10 102 339 1.4E-57 T 19-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APA12_RS09615 8d69b20d64f34630fd740b6245f183b9 489 PANTHER PTHR23135 10 485 5.6E-139 T 19-04-2016 APA12_RS09615 8d69b20d64f34630fd740b6245f183b9 489 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 3 486 29.725 T 19-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 APA12_RS09615 8d69b20d64f34630fd740b6245f183b9 489 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 21 484 5.4E-130 T 19-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 APA12_RS09615 8d69b20d64f34630fd740b6245f183b9 489 Pfam PF08245 Mur ligase middle domain 109 316 6.0E-40 T 19-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APA12_RS09615 8d69b20d64f34630fd740b6245f183b9 489 Pfam PF02875 Mur ligase family, glutamate ligase domain 336 421 1.5E-15 T 19-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APA12_RS09615 8d69b20d64f34630fd740b6245f183b9 489 Gene3D G3DSA:3.90.190.20 340 479 9.4E-50 T 19-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APA12_RS09615 8d69b20d64f34630fd740b6245f183b9 489 PANTHER PTHR23135:SF4 10 485 5.6E-139 T 19-04-2016 APA12_RS09615 8d69b20d64f34630fd740b6245f183b9 489 SUPERFAMILY SSF53623 102 335 5.61E-58 T 19-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APA12_RS09615 8d69b20d64f34630fd740b6245f183b9 489 SUPERFAMILY SSF63418 2 98 3.27E-21 T 19-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APA12_RS09615 8d69b20d64f34630fd740b6245f183b9 489 Pfam PF01225 Mur ligase family, catalytic domain 22 70 7.1E-9 T 19-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APA12_RS06420 749123754d0fc66d09f06cd1f4613919 434 PANTHER PTHR35334 5 434 6.2E-223 T 19-04-2016 APA12_RS06420 749123754d0fc66d09f06cd1f4613919 434 PANTHER PTHR35334:SF4 5 434 6.2E-223 T 19-04-2016 APA12_RS06420 749123754d0fc66d09f06cd1f4613919 434 Pfam PF03222 Tryptophan/tyrosine permease family 37 338 3.8E-5 T 19-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 APA12_RS10240 5a91bf9775660f626e8ab08233124de0 109 SMART SM00507 43 94 6.1E-6 T 19-04-2016 IPR003615 HNH nuclease APA12_RS10240 5a91bf9775660f626e8ab08233124de0 109 Pfam PF01844 HNH endonuclease 55 99 2.2E-12 T 19-04-2016 IPR002711 HNH endonuclease GO:0003676|GO:0004519 APA12_RS03000 3bcfd7c8d32a63772be8cf747f7d171b 331 Gene3D G3DSA:3.40.50.970 3 330 1.3E-110 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS03000 3bcfd7c8d32a63772be8cf747f7d171b 331 SUPERFAMILY SSF52518 6 330 5.05E-90 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS03000 3bcfd7c8d32a63772be8cf747f7d171b 331 PANTHER PTHR11516 6 331 2.7E-118 T 19-04-2016 APA12_RS03000 3bcfd7c8d32a63772be8cf747f7d171b 331 Pfam PF00676 Dehydrogenase E1 component 24 318 1.5E-77 T 19-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 APA12_RS03000 3bcfd7c8d32a63772be8cf747f7d171b 331 PANTHER PTHR11516:SF25 6 331 2.7E-118 T 19-04-2016 APA12_RS06810 f681d3abdba71dcc3e3ba5b49e18d20a 285 PRINTS PR01217 Proline rich extensin signature 115 131 5.9E-9 T 19-04-2016 APA12_RS06810 f681d3abdba71dcc3e3ba5b49e18d20a 285 PRINTS PR01217 Proline rich extensin signature 53 69 5.9E-9 T 19-04-2016 APA12_RS06810 f681d3abdba71dcc3e3ba5b49e18d20a 285 PRINTS PR01217 Proline rich extensin signature 137 154 5.9E-9 T 19-04-2016 APA12_RS06810 f681d3abdba71dcc3e3ba5b49e18d20a 285 PRINTS PR01217 Proline rich extensin signature 87 108 5.9E-9 T 19-04-2016 APA12_RS06810 f681d3abdba71dcc3e3ba5b49e18d20a 285 PRINTS PR01217 Proline rich extensin signature 75 87 5.9E-9 T 19-04-2016 APA12_RS06810 f681d3abdba71dcc3e3ba5b49e18d20a 285 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 203 279 8.3E-14 T 19-04-2016 IPR006260 TonB, C-terminal GO:0006810 APA12_RS06810 f681d3abdba71dcc3e3ba5b49e18d20a 285 Gene3D G3DSA:3.30.1150.10 165 280 4.2E-21 T 19-04-2016 APA12_RS06810 f681d3abdba71dcc3e3ba5b49e18d20a 285 SUPERFAMILY SSF74653 198 278 4.05E-14 T 19-04-2016 APA12_RS06810 f681d3abdba71dcc3e3ba5b49e18d20a 285 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 203 280 5.7E-17 T 19-04-2016 IPR006260 TonB, C-terminal GO:0006810 APA12_RS06770 d4f03b71f36d45432d114e9cee184893 293 Pfam PF04909 Amidohydrolase 31 292 2.1E-32 T 19-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APA12_RS06770 d4f03b71f36d45432d114e9cee184893 293 PANTHER PTHR35563:SF1 1 293 1.5E-64 T 19-04-2016 APA12_RS06770 d4f03b71f36d45432d114e9cee184893 293 Gene3D G3DSA:3.20.20.140 14 293 9.7E-88 T 19-04-2016 APA12_RS06770 d4f03b71f36d45432d114e9cee184893 293 SUPERFAMILY SSF51556 27 292 6.96E-69 T 19-04-2016 IPR032466 Metal-dependent hydrolase APA12_RS06770 d4f03b71f36d45432d114e9cee184893 293 PANTHER PTHR35563 1 293 1.5E-64 T 19-04-2016 APA12_RS13215 4fd66da992c8a8e6fe0a734194b2dc23 301 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 282 6.2E-108 T 19-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APA12_RS13215 4fd66da992c8a8e6fe0a734194b2dc23 301 PANTHER PTHR22855 1 289 2.0E-136 T 19-04-2016 APA12_RS13215 4fd66da992c8a8e6fe0a734194b2dc23 301 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 280 36.682 T 19-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APA12_RS13215 4fd66da992c8a8e6fe0a734194b2dc23 301 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 162 180 4.9E-37 T 19-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APA12_RS13215 4fd66da992c8a8e6fe0a734194b2dc23 301 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 128 142 4.9E-37 T 19-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APA12_RS13215 4fd66da992c8a8e6fe0a734194b2dc23 301 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 228 239 4.9E-37 T 19-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APA12_RS13215 4fd66da992c8a8e6fe0a734194b2dc23 301 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 250 259 4.9E-37 T 19-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APA12_RS13215 4fd66da992c8a8e6fe0a734194b2dc23 301 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 199 216 4.9E-37 T 19-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APA12_RS13215 4fd66da992c8a8e6fe0a734194b2dc23 301 PANTHER PTHR22855:SF17 1 289 2.0E-136 T 19-04-2016 APA12_RS13215 4fd66da992c8a8e6fe0a734194b2dc23 301 SUPERFAMILY SSF52096 24 281 2.85E-79 T 19-04-2016 IPR029045 ClpP/crotonase-like domain APA12_RS13215 4fd66da992c8a8e6fe0a734194b2dc23 301 Gene3D G3DSA:3.90.226.10 18 283 9.4E-67 T 19-04-2016 IPR029045 ClpP/crotonase-like domain APA12_RS13215 4fd66da992c8a8e6fe0a734194b2dc23 301 Pfam PF01039 Carboxyl transferase domain 94 239 1.9E-17 T 19-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APA12_RS10840 1d5b56289f1828997eaec94250a5a0f9 332 SUPERFAMILY SSF56655 12 325 9.77E-107 T 19-04-2016 APA12_RS10840 1d5b56289f1828997eaec94250a5a0f9 332 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 15 322 2.9E-138 T 19-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 APA12_RS10840 1d5b56289f1828997eaec94250a5a0f9 332 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 15 327 1.5E-114 T 19-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 APA12_RS10840 1d5b56289f1828997eaec94250a5a0f9 332 PIRSF PIRSF004532 13 330 7.1E-136 T 19-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 APA12_RS10840 1d5b56289f1828997eaec94250a5a0f9 332 PANTHER PTHR30447:SF0 6 322 9.6E-155 T 19-04-2016 APA12_RS10840 1d5b56289f1828997eaec94250a5a0f9 332 Gene3D G3DSA:3.30.540.10 185 327 8.4E-37 T 19-04-2016 APA12_RS10840 1d5b56289f1828997eaec94250a5a0f9 332 Gene3D G3DSA:3.30.540.10 14 184 1.1E-68 T 19-04-2016 APA12_RS10840 1d5b56289f1828997eaec94250a5a0f9 332 PANTHER PTHR30447 6 322 9.6E-155 T 19-04-2016 APA12_RS07935 e6e156a5e268d3e83a2446c879b02fa5 390 Pfam PF02515 CoA-transferase family III 15 376 1.1E-123 T 19-04-2016 IPR003673 CoA-transferase family III GO:0003824 APA12_RS07935 e6e156a5e268d3e83a2446c879b02fa5 390 Gene3D G3DSA:3.30.1540.10 231 313 1.4E-30 T 19-04-2016 APA12_RS07935 e6e156a5e268d3e83a2446c879b02fa5 390 Gene3D G3DSA:3.40.50.10540 10 225 6.7E-99 T 19-04-2016 IPR023606 CoA-transferase family III domain APA12_RS07935 e6e156a5e268d3e83a2446c879b02fa5 390 Gene3D G3DSA:3.40.50.10540 314 383 6.7E-99 T 19-04-2016 IPR023606 CoA-transferase family III domain APA12_RS07935 e6e156a5e268d3e83a2446c879b02fa5 390 SUPERFAMILY SSF89796 12 383 3.01E-126 T 19-04-2016 IPR023606 CoA-transferase family III domain APA12_RS07935 e6e156a5e268d3e83a2446c879b02fa5 390 PANTHER PTHR24023 67 330 8.9E-35 T 19-04-2016 APA12_RS07935 e6e156a5e268d3e83a2446c879b02fa5 390 PANTHER PTHR24023:SF593 67 330 8.9E-35 T 19-04-2016 APA12_RS04845 53fa647c03a113777564be334ea6c441 269 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APA12_RS04845 53fa647c03a113777564be334ea6c441 269 Pfam PF00005 ABC transporter 25 169 9.9E-32 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS04845 53fa647c03a113777564be334ea6c441 269 SUPERFAMILY SSF52540 10 235 2.26E-66 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS04845 53fa647c03a113777564be334ea6c441 269 SMART SM00382 34 218 3.2E-18 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS04845 53fa647c03a113777564be334ea6c441 269 Gene3D G3DSA:3.40.50.300 10 218 1.7E-64 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS04845 53fa647c03a113777564be334ea6c441 269 PANTHER PTHR24220 9 218 9.1E-82 T 19-04-2016 APA12_RS11730 b74ef86b13b823b26b49c165e58458f9 700 Gene3D G3DSA:3.40.50.920 574 697 6.3E-48 T 19-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APA12_RS11730 b74ef86b13b823b26b49c165e58458f9 700 Pfam PF02780 Transketolase, C-terminal domain 584 691 1.1E-9 T 19-04-2016 IPR033248 Transketolase, C-terminal domain APA12_RS11730 b74ef86b13b823b26b49c165e58458f9 700 Pfam PF02779 Transketolase, pyrimidine binding domain 389 559 1.5E-40 T 19-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APA12_RS11730 b74ef86b13b823b26b49c165e58458f9 700 SMART SM00861 386 560 9.4E-66 T 19-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APA12_RS11730 b74ef86b13b823b26b49c165e58458f9 700 Gene3D G3DSA:3.40.50.970 19 356 2.0E-117 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS11730 b74ef86b13b823b26b49c165e58458f9 700 ProSitePatterns PS00801 Transketolase signature 1. 32 52 - T 19-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APA12_RS11730 b74ef86b13b823b26b49c165e58458f9 700 Gene3D G3DSA:3.40.50.970 365 567 3.8E-72 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS11730 b74ef86b13b823b26b49c165e58458f9 700 PANTHER PTHR11624 372 698 0.0 T 19-04-2016 IPR033247 Transketolase family APA12_RS11730 b74ef86b13b823b26b49c165e58458f9 700 PANTHER PTHR11624 20 345 0.0 T 19-04-2016 IPR033247 Transketolase family APA12_RS11730 b74ef86b13b823b26b49c165e58458f9 700 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 24 369 3.6E-131 T 19-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APA12_RS11730 b74ef86b13b823b26b49c165e58458f9 700 SUPERFAMILY SSF52922 570 698 7.98E-41 T 19-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APA12_RS11730 b74ef86b13b823b26b49c165e58458f9 700 TIGRFAM TIGR00232 tktlase_bact: transketolase 27 697 2.7E-251 T 19-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 APA12_RS11730 b74ef86b13b823b26b49c165e58458f9 700 PANTHER PTHR11624:SF1 372 698 0.0 T 19-04-2016 APA12_RS11730 b74ef86b13b823b26b49c165e58458f9 700 PANTHER PTHR11624:SF1 20 345 0.0 T 19-04-2016 APA12_RS11730 b74ef86b13b823b26b49c165e58458f9 700 SUPERFAMILY SSF52518 11 355 9.99E-103 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS11730 b74ef86b13b823b26b49c165e58458f9 700 SUPERFAMILY SSF52518 372 562 1.02E-63 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS00695 3677ad2f1513d883700e5fe45650a016 462 PANTHER PTHR39329:SF1 1 461 3.9E-265 T 19-04-2016 APA12_RS00695 3677ad2f1513d883700e5fe45650a016 462 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 12 443 1.7E-217 T 19-04-2016 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 APA12_RS00695 3677ad2f1513d883700e5fe45650a016 462 Gene3D G3DSA:3.20.20.70 142 444 9.3E-159 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS00695 3677ad2f1513d883700e5fe45650a016 462 Gene3D G3DSA:2.30.170.30 1 54 5.8E-25 T 19-04-2016 APA12_RS00695 3677ad2f1513d883700e5fe45650a016 462 Gene3D G3DSA:1.10.220.70 55 141 3.9E-39 T 19-04-2016 APA12_RS00695 3677ad2f1513d883700e5fe45650a016 462 PANTHER PTHR39329 1 461 3.9E-265 T 19-04-2016 APA12_RS00695 3677ad2f1513d883700e5fe45650a016 462 PIRSF PIRSF018788 1 458 8.9E-231 T 19-04-2016 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 APA12_RS04655 876182f2501444e0b48dec61f2f3b354 144 ProSitePatterns PS00359 Ribosomal protein L11 signature. 128 143 - T 19-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 APA12_RS04655 876182f2501444e0b48dec61f2f3b354 144 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 5.0E-15 T 19-04-2016 APA12_RS04655 876182f2501444e0b48dec61f2f3b354 144 Gene3D G3DSA:3.30.1550.10 2 72 6.5E-38 T 19-04-2016 IPR020784 Ribosomal protein L11, N-terminal APA12_RS04655 876182f2501444e0b48dec61f2f3b354 144 SUPERFAMILY SSF46906 68 141 1.03E-22 T 19-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 APA12_RS04655 876182f2501444e0b48dec61f2f3b354 144 SUPERFAMILY SSF54747 3 73 8.24E-31 T 19-04-2016 IPR020784 Ribosomal protein L11, N-terminal APA12_RS04655 876182f2501444e0b48dec61f2f3b354 144 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 143 30.371 T 19-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 APA12_RS04655 876182f2501444e0b48dec61f2f3b354 144 PANTHER PTHR11661 1 144 8.3E-70 T 19-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 APA12_RS04655 876182f2501444e0b48dec61f2f3b354 144 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 5.6E-30 T 19-04-2016 IPR020784 Ribosomal protein L11, N-terminal APA12_RS04655 876182f2501444e0b48dec61f2f3b354 144 SMART SM00649 9 142 1.0E-78 T 19-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 APA12_RS04655 876182f2501444e0b48dec61f2f3b354 144 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 142 8.6E-62 T 19-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 APA12_RS04655 876182f2501444e0b48dec61f2f3b354 144 Gene3D G3DSA:1.10.10.250 73 142 1.2E-27 T 19-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 APA12_RS04655 876182f2501444e0b48dec61f2f3b354 144 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 141 9.5E-24 T 19-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 APA12_RS10475 69b777c5004116dc5202ce15f247ec7c 308 SUPERFAMILY SSF46785 3 87 4.98E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS10475 69b777c5004116dc5202ce15f247ec7c 308 PANTHER PTHR30537 1 292 5.1E-128 T 19-04-2016 APA12_RS10475 69b777c5004116dc5202ce15f247ec7c 308 Gene3D G3DSA:3.40.190.10 179 261 6.4E-19 T 19-04-2016 APA12_RS10475 69b777c5004116dc5202ce15f247ec7c 308 Gene3D G3DSA:1.10.10.10 3 83 3.2E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS10475 69b777c5004116dc5202ce15f247ec7c 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.8E-14 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS10475 69b777c5004116dc5202ce15f247ec7c 308 Pfam PF03466 LysR substrate binding domain 88 293 5.3E-34 T 19-04-2016 IPR005119 LysR, substrate-binding APA12_RS10475 69b777c5004116dc5202ce15f247ec7c 308 SUPERFAMILY SSF53850 89 295 1.57E-35 T 19-04-2016 APA12_RS10475 69b777c5004116dc5202ce15f247ec7c 308 PANTHER PTHR30537:SF29 1 292 5.1E-128 T 19-04-2016 APA12_RS10475 69b777c5004116dc5202ce15f247ec7c 308 Gene3D G3DSA:3.40.190.10 93 178 1.7E-12 T 19-04-2016 APA12_RS02760 43b78dff5a3b9748ce65677f0d0801d4 187 Pfam PF04973 Nicotinamide mononucleotide transporter 4 180 3.7E-42 T 19-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 APA12_RS02760 43b78dff5a3b9748ce65677f0d0801d4 187 PANTHER PTHR36122:SF1 4 180 4.9E-42 T 19-04-2016 APA12_RS02760 43b78dff5a3b9748ce65677f0d0801d4 187 PANTHER PTHR36122 4 180 4.9E-42 T 19-04-2016 APA12_RS02760 43b78dff5a3b9748ce65677f0d0801d4 187 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 4 180 2.5E-20 T 19-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 APA12_RS05920 45ff91fb00b12013e219843e2648a1eb 410 Gene3D G3DSA:3.40.47.10 262 408 1.2E-55 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APA12_RS05920 45ff91fb00b12013e219843e2648a1eb 410 PANTHER PTHR11712 1 407 7.3E-206 T 19-04-2016 APA12_RS05920 45ff91fb00b12013e219843e2648a1eb 410 Gene3D G3DSA:3.40.47.10 1 259 1.5E-75 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APA12_RS05920 45ff91fb00b12013e219843e2648a1eb 410 SMART SM00825 Beta-ketoacyl synthase 1 410 3.0E-14 T 19-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain APA12_RS05920 45ff91fb00b12013e219843e2648a1eb 410 SUPERFAMILY SSF53901 1 253 3.84E-74 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APA12_RS05920 45ff91fb00b12013e219843e2648a1eb 410 PIRSF PIRSF000447 1 410 3.0E-177 T 19-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 APA12_RS05920 45ff91fb00b12013e219843e2648a1eb 410 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 367 7.2E-35 T 19-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal APA12_RS05920 45ff91fb00b12013e219843e2648a1eb 410 SUPERFAMILY SSF53901 214 409 1.32E-67 T 19-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APA12_RS05920 45ff91fb00b12013e219843e2648a1eb 410 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 246 1.5E-58 T 19-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal APA12_RS05920 45ff91fb00b12013e219843e2648a1eb 410 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 153 169 - T 19-04-2016 IPR018201 Beta-ketoacyl synthase, active site APA12_RS05920 45ff91fb00b12013e219843e2648a1eb 410 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 1 408 5.3E-185 T 19-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 APA12_RS05920 45ff91fb00b12013e219843e2648a1eb 410 PANTHER PTHR11712:SF273 1 407 7.3E-206 T 19-04-2016 APA12_RS10950 daa007c2742de1a7756367831440f800 895 Pfam PF13403 Hint domain 550 689 3.1E-42 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS10950 daa007c2742de1a7756367831440f800 895 SUPERFAMILY SSF51294 551 686 3.14E-11 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS10950 daa007c2742de1a7756367831440f800 895 Gene3D G3DSA:2.170.16.10 550 694 3.0E-7 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS12050 9e48012a4527f747d4911224ba92c04e 263 Hamap MF_00943 Maleate isomerase [maiA]. 18 263 49.206 T 19-04-2016 IPR028615 Maleate isomerase GO:0050076 KEGG: 00650+5.2.1.1|KEGG: 00760+5.2.1.1|MetaCyc: PWY-5033|MetaCyc: PWY-6993|MetaCyc: PWY-7128|MetaCyc: PWY-722 APA12_RS12050 9e48012a4527f747d4911224ba92c04e 263 PIRSF PIRSF015736 6 263 2.3E-62 T 19-04-2016 IPR026286 Maleate isomerase/Arylmalonate decarboxylase APA12_RS12050 9e48012a4527f747d4911224ba92c04e 263 PANTHER PTHR40267 13 259 4.2E-25 T 19-04-2016 APA12_RS11205 a921d99056e1e496c03004e3da9f3559 548 PANTHER PTHR37944 132 541 6.9E-47 T 19-04-2016 APA12_RS11205 a921d99056e1e496c03004e3da9f3559 548 Pfam PF04966 Carbohydrate-selective porin, OprB family 177 518 8.2E-31 T 19-04-2016 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 APA12_RS03015 4028c30269bf2562a663c73704178b0e 161 Pfam PF00011 Hsp20/alpha crystallin family 57 159 2.0E-22 T 19-04-2016 IPR002068 Alpha crystallin/Hsp20 domain APA12_RS03015 4028c30269bf2562a663c73704178b0e 161 Gene3D G3DSA:2.60.40.790 22 159 9.2E-38 T 19-04-2016 IPR008978 HSP20-like chaperone APA12_RS03015 4028c30269bf2562a663c73704178b0e 161 SUPERFAMILY SSF49764 30 158 1.88E-32 T 19-04-2016 IPR008978 HSP20-like chaperone APA12_RS03015 4028c30269bf2562a663c73704178b0e 161 PANTHER PTHR11527 21 159 3.0E-28 T 19-04-2016 IPR031107 Small heat shock protein HSP20 APA12_RS01800 aceebee475f40f988ebcdd8a55d9e77a 471 Gene3D G3DSA:1.10.260.40 8 74 8.4E-16 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APA12_RS01800 aceebee475f40f988ebcdd8a55d9e77a 471 SMART SM00530 13 68 8.0E-12 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APA12_RS01800 aceebee475f40f988ebcdd8a55d9e77a 471 Pfam PF01381 Helix-turn-helix 14 68 1.7E-10 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APA12_RS01800 aceebee475f40f988ebcdd8a55d9e77a 471 Pfam PF09856 Predicted transcriptional regulator (DUF2083) 308 464 5.5E-56 T 19-04-2016 IPR018653 Domain of unknown function DUF2083,transcriptional regulator APA12_RS01800 aceebee475f40f988ebcdd8a55d9e77a 471 PIRSF PIRSF019251 3 469 6.0E-143 T 19-04-2016 IPR026281 HTH-type transcriptional regulator RamB GO:0006355 APA12_RS01800 aceebee475f40f988ebcdd8a55d9e77a 471 Pfam PF06114 Domain of unknown function (DUF955) 190 307 1.6E-11 T 19-04-2016 IPR010359 HTH domain, IrrE-type APA12_RS01800 aceebee475f40f988ebcdd8a55d9e77a 471 PANTHER PTHR10245 11 68 8.7E-12 T 19-04-2016 APA12_RS01800 aceebee475f40f988ebcdd8a55d9e77a 471 SUPERFAMILY SSF47413 9 70 3.75E-13 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APA12_RS10420 0dc73c3247954d8234f5be8ece709f68 340 PANTHER PTHR34595 1 336 7.2E-66 T 19-04-2016 APA12_RS10420 0dc73c3247954d8234f5be8ece709f68 340 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 14 323 8.0E-74 T 19-04-2016 IPR007296 Domain of unknown function DUF403 APA12_RS09870 3306c9fe5a04e7848f7567423f50397a 375 PANTHER PTHR21266:SF19 28 187 2.9E-44 T 19-04-2016 APA12_RS09870 3306c9fe5a04e7848f7567423f50397a 375 SUPERFAMILY SSF50022 28 141 3.54E-31 T 19-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APA12_RS09870 3306c9fe5a04e7848f7567423f50397a 375 SUPERFAMILY SSF55961 130 341 6.32E-24 T 19-04-2016 APA12_RS09870 3306c9fe5a04e7848f7567423f50397a 375 Gene3D G3DSA:2.102.10.10 29 141 3.5E-30 T 19-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APA12_RS09870 3306c9fe5a04e7848f7567423f50397a 375 PANTHER PTHR21266 28 187 2.9E-44 T 19-04-2016 APA12_RS09870 3306c9fe5a04e7848f7567423f50397a 375 Pfam PF00355 Rieske [2Fe-2S] domain 31 121 7.8E-20 T 19-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APA12_RS07085 da59211de1beed5a632546990f8fd99d 440 SUPERFAMILY SSF53098 158 394 5.46E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS07085 da59211de1beed5a632546990f8fd99d 440 Pfam PF13701 Transposase DDE domain group 1 13 394 7.5E-142 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS04000 eb56eb5b8bfa66bf55a081022bf66df2 245 PANTHER PTHR33508:SF1 15 237 8.4E-44 T 19-04-2016 APA12_RS04000 eb56eb5b8bfa66bf55a081022bf66df2 245 Pfam PF01914 MarC family integral membrane protein 20 229 7.0E-36 T 19-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 APA12_RS04000 eb56eb5b8bfa66bf55a081022bf66df2 245 PANTHER PTHR33508 15 237 8.4E-44 T 19-04-2016 APA12_RS04000 eb56eb5b8bfa66bf55a081022bf66df2 245 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 19 227 2.1E-35 T 19-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 APA12_RS01915 ea05227349ab94be4a115de9f15a86ee 562 PANTHER PTHR18968 12 550 4.1E-246 T 19-04-2016 APA12_RS01915 ea05227349ab94be4a115de9f15a86ee 562 Gene3D G3DSA:3.40.50.970 366 552 2.2E-53 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS01915 ea05227349ab94be4a115de9f15a86ee 562 TIGRFAM TIGR02418 acolac_catab: acetolactate synthase, catabolic 12 550 6.1E-237 T 19-04-2016 IPR012782 Acetolactate synthase, catabolic GO:0000287|GO:0003984|GO:0030976|GO:0034077 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00626 APA12_RS01915 ea05227349ab94be4a115de9f15a86ee 562 SUPERFAMILY SSF52518 9 186 4.98E-48 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS01915 ea05227349ab94be4a115de9f15a86ee 562 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 392 538 9.1E-39 T 19-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 APA12_RS01915 ea05227349ab94be4a115de9f15a86ee 562 Gene3D G3DSA:3.40.50.1220 191 337 1.2E-35 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APA12_RS01915 ea05227349ab94be4a115de9f15a86ee 562 Gene3D G3DSA:3.40.50.970 12 184 1.3E-58 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS01915 ea05227349ab94be4a115de9f15a86ee 562 SUPERFAMILY SSF52467 191 357 2.09E-36 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APA12_RS01915 ea05227349ab94be4a115de9f15a86ee 562 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 12 177 5.7E-49 T 19-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 APA12_RS01915 ea05227349ab94be4a115de9f15a86ee 562 PANTHER PTHR18968:SF129 12 550 4.1E-246 T 19-04-2016 APA12_RS01915 ea05227349ab94be4a115de9f15a86ee 562 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 8.7E-29 T 19-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 APA12_RS01915 ea05227349ab94be4a115de9f15a86ee 562 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 429 448 - T 19-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 APA12_RS01915 ea05227349ab94be4a115de9f15a86ee 562 SUPERFAMILY SSF52518 370 554 1.28E-50 T 19-04-2016 IPR029061 Thiamin diphosphate-binding fold APA12_RS12765 640f2a54adfa77b44a054fb248e46922 356 PANTHER PTHR30213:SF2 63 343 2.9E-55 T 19-04-2016 APA12_RS12765 640f2a54adfa77b44a054fb248e46922 356 Pfam PF03631 Virulence factor BrkB 89 344 1.0E-54 T 19-04-2016 IPR017039 Virulence factor BrkB APA12_RS12765 640f2a54adfa77b44a054fb248e46922 356 PANTHER PTHR30213 63 343 2.9E-55 T 19-04-2016 APA12_RS12765 640f2a54adfa77b44a054fb248e46922 356 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 88 343 4.2E-26 T 19-04-2016 IPR017039 Virulence factor BrkB APA12_RS11260 f4f2cd5ed0e351154d7319a8bce830f9 376 Gene3D G3DSA:3.40.190.10 143 288 1.3E-30 T 19-04-2016 APA12_RS11260 f4f2cd5ed0e351154d7319a8bce830f9 376 Pfam PF13416 Bacterial extracellular solute-binding protein 49 320 1.6E-26 T 19-04-2016 APA12_RS11260 f4f2cd5ed0e351154d7319a8bce830f9 376 PANTHER PTHR30222 14 303 1.6E-58 T 19-04-2016 APA12_RS11260 f4f2cd5ed0e351154d7319a8bce830f9 376 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 265 284 7.4E-8 T 19-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APA12_RS11260 f4f2cd5ed0e351154d7319a8bce830f9 376 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 157 171 7.4E-8 T 19-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APA12_RS11260 f4f2cd5ed0e351154d7319a8bce830f9 376 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 83 97 7.4E-8 T 19-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APA12_RS11260 f4f2cd5ed0e351154d7319a8bce830f9 376 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 39 55 7.4E-8 T 19-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APA12_RS11260 f4f2cd5ed0e351154d7319a8bce830f9 376 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 55 76 7.4E-8 T 19-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APA12_RS11260 f4f2cd5ed0e351154d7319a8bce830f9 376 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 132 148 7.4E-8 T 19-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APA12_RS11260 f4f2cd5ed0e351154d7319a8bce830f9 376 Gene3D G3DSA:3.40.190.10 33 141 1.6E-32 T 19-04-2016 APA12_RS11260 f4f2cd5ed0e351154d7319a8bce830f9 376 Gene3D G3DSA:3.40.190.10 289 324 1.6E-32 T 19-04-2016 APA12_RS11260 f4f2cd5ed0e351154d7319a8bce830f9 376 PANTHER PTHR30222:SF5 14 303 1.6E-58 T 19-04-2016 APA12_RS11260 f4f2cd5ed0e351154d7319a8bce830f9 376 SUPERFAMILY SSF53850 33 352 7.06E-61 T 19-04-2016 APA12_RS11070 7fd938f7aca9f6edb1f6835b680d1f2e 369 Pfam PF03702 Uncharacterised protein family (UPF0075) 1 339 1.2E-87 T 19-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 APA12_RS11070 7fd938f7aca9f6edb1f6835b680d1f2e 369 Gene3D G3DSA:3.30.420.40 134 309 7.0E-59 T 19-04-2016 APA12_RS11070 7fd938f7aca9f6edb1f6835b680d1f2e 369 PANTHER PTHR30605 1 354 7.2E-112 T 19-04-2016 APA12_RS11070 7fd938f7aca9f6edb1f6835b680d1f2e 369 SUPERFAMILY SSF53067 132 310 1.42E-17 T 19-04-2016 APA12_RS11070 7fd938f7aca9f6edb1f6835b680d1f2e 369 SUPERFAMILY SSF53067 61 104 1.42E-17 T 19-04-2016 APA12_RS11070 7fd938f7aca9f6edb1f6835b680d1f2e 369 SUPERFAMILY SSF53067 8 28 1.42E-17 T 19-04-2016 APA12_RS11070 7fd938f7aca9f6edb1f6835b680d1f2e 369 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 1 349 34.578 T 19-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 APA12_RS04435 31bec8c8b9a1e93384e39dce730ce989 207 Gene3D G3DSA:3.40.50.170 5 194 2.8E-64 T 19-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APA12_RS04435 31bec8c8b9a1e93384e39dce730ce989 207 Pfam PF00551 Formyl transferase 8 187 1.8E-53 T 19-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APA12_RS04435 31bec8c8b9a1e93384e39dce730ce989 207 SUPERFAMILY SSF53328 8 196 6.54E-58 T 19-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APA12_RS04435 31bec8c8b9a1e93384e39dce730ce989 207 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 8 194 1.1E-64 T 19-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 APA12_RS04435 31bec8c8b9a1e93384e39dce730ce989 207 PANTHER PTHR10520 1 194 2.7E-78 T 19-04-2016 APA12_RS04435 31bec8c8b9a1e93384e39dce730ce989 207 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 139 162 - T 19-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APA12_RS04435 31bec8c8b9a1e93384e39dce730ce989 207 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 7 193 30.042 T 19-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 APA12_RS02595 68266f97c802b9804abb13288cc976d0 729 PANTHER PTHR23028 39 277 1.6E-63 T 19-04-2016 APA12_RS02595 68266f97c802b9804abb13288cc976d0 729 PANTHER PTHR23028 293 425 1.6E-63 T 19-04-2016 APA12_RS02595 68266f97c802b9804abb13288cc976d0 729 Pfam PF01757 Acyltransferase family 65 416 3.8E-17 T 19-04-2016 IPR002656 Acyltransferase 3 GO:0016747 APA12_RS02595 68266f97c802b9804abb13288cc976d0 729 PANTHER PTHR23028:SF53 39 277 1.6E-63 T 19-04-2016 APA12_RS02595 68266f97c802b9804abb13288cc976d0 729 PANTHER PTHR23028:SF53 293 425 1.6E-63 T 19-04-2016 APA12_RS06040 f4d80790c4e4eb6899f4e44ab63caf5b 227 SUPERFAMILY SSF56219 28 221 2.36E-24 T 19-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APA12_RS06040 f4d80790c4e4eb6899f4e44ab63caf5b 227 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 32 214 9.6E-13 T 19-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APA12_RS06040 f4d80790c4e4eb6899f4e44ab63caf5b 227 Gene3D G3DSA:3.60.10.10 25 161 3.9E-11 T 19-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APA12_RS11215 3cec2f247a521c6bc819b46b1d7c72e9 711 Gene3D G3DSA:1.10.760.10 610 700 5.6E-16 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS11215 3cec2f247a521c6bc819b46b1d7c72e9 711 Gene3D G3DSA:2.140.10.10 16 599 1.7E-140 T 19-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain APA12_RS11215 3cec2f247a521c6bc819b46b1d7c72e9 711 TIGRFAM TIGR03075 PQQ_enz_alc_DH: PQQ-dependent dehydrogenase, methanol/ethanol family 29 566 3.6E-192 T 19-04-2016 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family GO:0005509|GO:0016020|GO:0016614|GO:0055114 APA12_RS11215 3cec2f247a521c6bc819b46b1d7c72e9 711 SMART SM00564 84 116 4.2E-5 T 19-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APA12_RS11215 3cec2f247a521c6bc819b46b1d7c72e9 711 SMART SM00564 187 224 0.94 T 19-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APA12_RS11215 3cec2f247a521c6bc819b46b1d7c72e9 711 SMART SM00564 135 167 2.7E-7 T 19-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APA12_RS11215 3cec2f247a521c6bc819b46b1d7c72e9 711 SMART SM00564 294 321 700.0 T 19-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APA12_RS11215 3cec2f247a521c6bc819b46b1d7c72e9 711 SMART SM00564 342 375 110.0 T 19-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APA12_RS11215 3cec2f247a521c6bc819b46b1d7c72e9 711 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 266 287 - T 19-04-2016 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 APA12_RS11215 3cec2f247a521c6bc819b46b1d7c72e9 711 PANTHER PTHR32303:SF2 243 370 5.2E-86 T 19-04-2016 APA12_RS11215 3cec2f247a521c6bc819b46b1d7c72e9 711 PANTHER PTHR32303:SF2 1 226 5.2E-86 T 19-04-2016 APA12_RS11215 3cec2f247a521c6bc819b46b1d7c72e9 711 PANTHER PTHR32303:SF2 403 600 5.2E-86 T 19-04-2016 APA12_RS11215 3cec2f247a521c6bc819b46b1d7c72e9 711 SUPERFAMILY SSF46626 606 697 3.2E-15 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS11215 3cec2f247a521c6bc819b46b1d7c72e9 711 PANTHER PTHR32303 243 370 5.2E-86 T 19-04-2016 APA12_RS11215 3cec2f247a521c6bc819b46b1d7c72e9 711 PANTHER PTHR32303 1 226 5.2E-86 T 19-04-2016 APA12_RS11215 3cec2f247a521c6bc819b46b1d7c72e9 711 PANTHER PTHR32303 403 600 5.2E-86 T 19-04-2016 APA12_RS11215 3cec2f247a521c6bc819b46b1d7c72e9 711 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 620 694 9.9E-10 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS11215 3cec2f247a521c6bc819b46b1d7c72e9 711 SUPERFAMILY SSF50998 36 604 6.15E-157 T 19-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APA12_RS11215 3cec2f247a521c6bc819b46b1d7c72e9 711 Pfam PF13360 PQQ-like domain 70 230 3.2E-14 T 19-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat APA12_RS06880 22c7677edf4def2177a98de6304406a8 325 PANTHER PTHR30273 1 304 2.2E-33 T 19-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component APA12_RS06880 22c7677edf4def2177a98de6304406a8 325 PANTHER PTHR30273:SF2 1 304 2.2E-33 T 19-04-2016 APA12_RS06880 22c7677edf4def2177a98de6304406a8 325 PIRSF PIRSF018266 1 324 1.3E-63 T 19-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component APA12_RS06880 22c7677edf4def2177a98de6304406a8 325 Pfam PF04773 FecR protein 123 209 1.1E-16 T 19-04-2016 IPR006860 FecR protein APA12_RS06880 22c7677edf4def2177a98de6304406a8 325 Pfam PF16220 Domain of unknown function (DUF4880) 10 50 4.1E-10 T 19-04-2016 IPR032623 FecR, N-terminal APA12_RS02025 0ad46acc699efa637a7f0f600abfe983 301 Gene3D G3DSA:3.30.70.890 179 296 1.9E-24 T 19-04-2016 IPR013750 GHMP kinase, C-terminal domain APA12_RS02025 0ad46acc699efa637a7f0f600abfe983 301 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 13 281 5.6E-47 T 19-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 APA12_RS02025 0ad46acc699efa637a7f0f600abfe983 301 SUPERFAMILY SSF54211 13 175 9.11E-35 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APA12_RS02025 0ad46acc699efa637a7f0f600abfe983 301 Pfam PF00288 GHMP kinases N terminal domain 105 160 3.8E-9 T 19-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 APA12_RS02025 0ad46acc699efa637a7f0f600abfe983 301 Pfam PF08544 GHMP kinases C terminal 235 289 3.5E-6 T 19-04-2016 IPR013750 GHMP kinase, C-terminal domain APA12_RS02025 0ad46acc699efa637a7f0f600abfe983 301 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 13 292 28.852 T 19-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 APA12_RS02025 0ad46acc699efa637a7f0f600abfe983 301 Gene3D G3DSA:3.30.230.10 15 176 9.4E-44 T 19-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APA12_RS02025 0ad46acc699efa637a7f0f600abfe983 301 PANTHER PTHR20861 1 295 8.9E-60 T 19-04-2016 APA12_RS02025 0ad46acc699efa637a7f0f600abfe983 301 SUPERFAMILY SSF55060 179 298 1.24E-20 T 19-04-2016 IPR013750 GHMP kinase, C-terminal domain APA12_RS02025 0ad46acc699efa637a7f0f600abfe983 301 PANTHER PTHR20861:SF2 1 295 8.9E-60 T 19-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 APA12_RS02025 0ad46acc699efa637a7f0f600abfe983 301 PIRSF PIRSF010376 11 300 1.2E-72 T 19-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 APA12_RS01700 c06e8143686e37acf89ad61d7bef681d 89 SUPERFAMILY SSF56349 15 71 1.35E-8 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APA12_RS01700 c06e8143686e37acf89ad61d7bef681d 89 Gene3D G3DSA:1.10.443.10 17 72 1.1E-6 T 19-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APA12_RS13310 006c4ce2c0566f65dc7b6d12ea9ddfce 168 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 114 148 - T 19-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 APA12_RS13310 006c4ce2c0566f65dc7b6d12ea9ddfce 168 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 3.4E-31 T 19-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APA12_RS13310 006c4ce2c0566f65dc7b6d12ea9ddfce 168 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 84 100 3.4E-31 T 19-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APA12_RS13310 006c4ce2c0566f65dc7b6d12ea9ddfce 168 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 139 151 3.4E-31 T 19-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APA12_RS13310 006c4ce2c0566f65dc7b6d12ea9ddfce 168 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 62 78 3.4E-31 T 19-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APA12_RS13310 006c4ce2c0566f65dc7b6d12ea9ddfce 168 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 108 127 3.4E-31 T 19-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APA12_RS13310 006c4ce2c0566f65dc7b6d12ea9ddfce 168 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 154 44.165 T 19-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APA12_RS13310 006c4ce2c0566f65dc7b6d12ea9ddfce 168 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 156 2.0E-43 T 19-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APA12_RS13310 006c4ce2c0566f65dc7b6d12ea9ddfce 168 PANTHER PTHR30194 1 168 1.2E-58 T 19-04-2016 APA12_RS13310 006c4ce2c0566f65dc7b6d12ea9ddfce 168 Gene3D G3DSA:3.30.420.10 3 156 3.0E-56 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS13310 006c4ce2c0566f65dc7b6d12ea9ddfce 168 SUPERFAMILY SSF53098 3 155 5.5E-48 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS13310 006c4ce2c0566f65dc7b6d12ea9ddfce 168 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 5 151 1.8E-44 T 19-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APA12_RS10545 85252eae9fc6eb60e7d6636db21ba577 135 Pfam PF00364 Biotin-requiring enzyme 59 132 2.9E-9 T 19-04-2016 IPR000089 Biotin/lipoyl attachment APA12_RS10545 85252eae9fc6eb60e7d6636db21ba577 135 Gene3D G3DSA:2.40.50.100 56 132 5.9E-11 T 19-04-2016 APA12_RS10545 85252eae9fc6eb60e7d6636db21ba577 135 SUPERFAMILY SSF51230 58 132 1.16E-11 T 19-04-2016 IPR011053 Single hybrid motif APA12_RS03700 46d3cd13a88f06826eb6206b5fd8e8e0 207 SMART SM01007 13 200 2.2E-49 T 19-04-2016 IPR001303 Class II aldolase/adducin N-terminal APA12_RS03700 46d3cd13a88f06826eb6206b5fd8e8e0 207 SUPERFAMILY SSF53639 10 203 1.79E-42 T 19-04-2016 IPR001303 Class II aldolase/adducin N-terminal APA12_RS03700 46d3cd13a88f06826eb6206b5fd8e8e0 207 PANTHER PTHR10640 24 205 1.3E-36 T 19-04-2016 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00904 APA12_RS03700 46d3cd13a88f06826eb6206b5fd8e8e0 207 Gene3D G3DSA:3.40.225.10 11 205 2.7E-44 T 19-04-2016 IPR001303 Class II aldolase/adducin N-terminal APA12_RS03700 46d3cd13a88f06826eb6206b5fd8e8e0 207 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 18 205 2.8E-67 T 19-04-2016 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00904 APA12_RS03700 46d3cd13a88f06826eb6206b5fd8e8e0 207 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 15 199 8.7E-39 T 19-04-2016 IPR001303 Class II aldolase/adducin N-terminal APA12_RS03700 46d3cd13a88f06826eb6206b5fd8e8e0 207 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 207 99.153 T 19-04-2016 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00904 APA12_RS02845 f1e473c687a4e5dd097565a248b8ac87 339 SUPERFAMILY SSF100950 280 332 4.19E-7 T 19-04-2016 APA12_RS02845 f1e473c687a4e5dd097565a248b8ac87 339 SMART SM00882 4 249 2.7E-52 T 19-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 APA12_RS02845 f1e473c687a4e5dd097565a248b8ac87 339 Gene3D G3DSA:3.40.810.20 284 317 9.4E-5 T 19-04-2016 APA12_RS02845 f1e473c687a4e5dd097565a248b8ac87 339 PANTHER PTHR13707:SF38 4 324 1.3E-90 T 19-04-2016 APA12_RS02845 f1e473c687a4e5dd097565a248b8ac87 339 Gene3D G3DSA:3.40.1080.10 1 249 5.7E-59 T 19-04-2016 APA12_RS02845 f1e473c687a4e5dd097565a248b8ac87 339 PANTHER PTHR13707 4 324 1.3E-90 T 19-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 APA12_RS02845 f1e473c687a4e5dd097565a248b8ac87 339 Pfam PF01144 Coenzyme A transferase 5 249 1.8E-32 T 19-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 APA12_RS02845 f1e473c687a4e5dd097565a248b8ac87 339 SUPERFAMILY SSF100950 3 267 3.35E-74 T 19-04-2016 APA12_RS07545 33c8a59c55149b3f8c06dea6d2ab2f22 312 PANTHER PTHR12001 21 297 1.7E-97 T 19-04-2016 IPR017446 Polyprenyl synthetase-related APA12_RS07545 33c8a59c55149b3f8c06dea6d2ab2f22 312 SUPERFAMILY SSF48576 30 306 2.4E-81 T 19-04-2016 IPR008949 Isoprenoid synthase domain APA12_RS07545 33c8a59c55149b3f8c06dea6d2ab2f22 312 Gene3D G3DSA:1.10.600.10 24 310 1.7E-91 T 19-04-2016 IPR008949 Isoprenoid synthase domain APA12_RS07545 33c8a59c55149b3f8c06dea6d2ab2f22 312 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 99 115 - T 19-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APA12_RS07545 33c8a59c55149b3f8c06dea6d2ab2f22 312 Pfam PF00348 Polyprenyl synthetase 49 287 3.0E-57 T 19-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APA12_RS07545 33c8a59c55149b3f8c06dea6d2ab2f22 312 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 231 243 - T 19-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APA12_RS07545 33c8a59c55149b3f8c06dea6d2ab2f22 312 PANTHER PTHR12001:SF23 21 297 1.7E-97 T 19-04-2016 APA12_RS07650 32f5860da63ed53743aaf4f347ec3e26 364 Gene3D G3DSA:3.20.20.70 5 332 1.4E-72 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS07650 32f5860da63ed53743aaf4f347ec3e26 364 Pfam PF03060 Nitronate monooxygenase 10 336 1.2E-78 T 19-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 APA12_RS07650 32f5860da63ed53743aaf4f347ec3e26 364 SUPERFAMILY SSF51412 5 342 8.09E-63 T 19-04-2016 APA12_RS07650 32f5860da63ed53743aaf4f347ec3e26 364 PANTHER PTHR32332:SF12 1 81 6.7E-126 T 19-04-2016 APA12_RS07650 32f5860da63ed53743aaf4f347ec3e26 364 PANTHER PTHR32332:SF12 106 359 6.7E-126 T 19-04-2016 APA12_RS07650 32f5860da63ed53743aaf4f347ec3e26 364 PANTHER PTHR32332 1 81 6.7E-126 T 19-04-2016 APA12_RS07650 32f5860da63ed53743aaf4f347ec3e26 364 PANTHER PTHR32332 106 359 6.7E-126 T 19-04-2016 APA12_RS07475 21210f3a2d995c8acc4029c9d4d0ad52 276 PANTHER PTHR30592 13 267 2.3E-70 T 19-04-2016 APA12_RS07475 21210f3a2d995c8acc4029c9d4d0ad52 276 PIRSF PIRSF015626 8 275 9.8E-65 T 19-04-2016 IPR003786 Protein FdhD GO:0016783 APA12_RS07475 21210f3a2d995c8acc4029c9d4d0ad52 276 Pfam PF02634 FdhD/NarQ family 39 269 3.8E-63 T 19-04-2016 IPR003786 Protein FdhD GO:0016783 APA12_RS07475 21210f3a2d995c8acc4029c9d4d0ad52 276 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 38 264 5.8E-50 T 19-04-2016 IPR003786 Protein FdhD GO:0016783 APA12_RS07475 21210f3a2d995c8acc4029c9d4d0ad52 276 PANTHER PTHR30592:SF1 13 267 2.3E-70 T 19-04-2016 APA12_RS07475 21210f3a2d995c8acc4029c9d4d0ad52 276 Gene3D G3DSA:3.40.140.10 146 268 1.3E-39 T 19-04-2016 APA12_RS07475 21210f3a2d995c8acc4029c9d4d0ad52 276 SUPERFAMILY SSF53927 32 269 1.93E-65 T 19-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 APA12_RS07475 21210f3a2d995c8acc4029c9d4d0ad52 276 Gene3D G3DSA:3.10.20.10 41 127 1.3E-24 T 19-04-2016 APA12_RS00880 b3de0bb523d1f66a4bc04c7668ca7370 360 SMART SM00220 15 288 2.7E-43 T 19-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 APA12_RS00880 b3de0bb523d1f66a4bc04c7668ca7370 360 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 130 142 - T 19-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 APA12_RS00880 b3de0bb523d1f66a4bc04c7668ca7370 360 Gene3D G3DSA:1.10.510.10 111 281 1.3E-37 T 19-04-2016 APA12_RS00880 b3de0bb523d1f66a4bc04c7668ca7370 360 SUPERFAMILY SSF50249 287 357 9.14E-8 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS00880 b3de0bb523d1f66a4bc04c7668ca7370 360 Gene3D G3DSA:3.30.200.20 7 110 2.5E-16 T 19-04-2016 APA12_RS00880 b3de0bb523d1f66a4bc04c7668ca7370 360 SUPERFAMILY SSF56112 9 282 3.33E-59 T 19-04-2016 IPR011009 Protein kinase-like domain APA12_RS00880 b3de0bb523d1f66a4bc04c7668ca7370 360 Pfam PF00069 Protein kinase domain 16 281 9.3E-43 T 19-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 APA12_RS00880 b3de0bb523d1f66a4bc04c7668ca7370 360 PANTHER PTHR24362 11 281 3.7E-54 T 19-04-2016 APA12_RS00880 b3de0bb523d1f66a4bc04c7668ca7370 360 Gene3D G3DSA:2.40.50.140 294 357 3.3E-8 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS05695 ceef6593929d3b2e29763fe930792790 361 Gene3D G3DSA:3.20.20.70 34 339 1.2E-50 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS05695 ceef6593929d3b2e29763fe930792790 361 Pfam PF03060 Nitronate monooxygenase 108 343 4.8E-30 T 19-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 APA12_RS05695 ceef6593929d3b2e29763fe930792790 361 Pfam PF03060 Nitronate monooxygenase 33 103 6.0E-18 T 19-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 APA12_RS05695 ceef6593929d3b2e29763fe930792790 361 PANTHER PTHR32332 27 357 3.0E-72 T 19-04-2016 APA12_RS05695 ceef6593929d3b2e29763fe930792790 361 SUPERFAMILY SSF51412 33 347 1.36E-48 T 19-04-2016 APA12_RS05695 ceef6593929d3b2e29763fe930792790 361 PANTHER PTHR32332:SF20 27 357 3.0E-72 T 19-04-2016 APA12_RS04770 adf2ae7a96b73be4b238eea8e2700f24 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 24.208 T 19-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid APA12_RS04770 adf2ae7a96b73be4b238eea8e2700f24 101 Gene3D G3DSA:4.10.830.10 41 101 2.5E-29 T 19-04-2016 APA12_RS04770 adf2ae7a96b73be4b238eea8e2700f24 101 SUPERFAMILY SSF57716 2 101 2.19E-33 T 19-04-2016 APA12_RS04770 adf2ae7a96b73be4b238eea8e2700f24 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 8.3E-25 T 19-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04770 adf2ae7a96b73be4b238eea8e2700f24 101 PANTHER PTHR19836 1 101 1.2E-49 T 19-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04770 adf2ae7a96b73be4b238eea8e2700f24 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 19-04-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 APA12_RS12375 0dfa55a5decf29a175240a5b28b563d3 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 19-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS12375 0dfa55a5decf29a175240a5b28b563d3 89 Pfam PF00312 Ribosomal protein S15 10 88 4.7E-37 T 19-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS12375 0dfa55a5decf29a175240a5b28b563d3 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 1.7E-36 T 19-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 APA12_RS12375 0dfa55a5decf29a175240a5b28b563d3 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.716 T 19-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 APA12_RS12375 0dfa55a5decf29a175240a5b28b563d3 89 SUPERFAMILY SSF47060 3 89 3.24E-35 T 19-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 APA12_RS12375 0dfa55a5decf29a175240a5b28b563d3 89 PANTHER PTHR23321 1 89 1.3E-42 T 19-04-2016 APA12_RS12375 0dfa55a5decf29a175240a5b28b563d3 89 SMART SM01387 8 88 6.1E-51 T 19-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS12375 0dfa55a5decf29a175240a5b28b563d3 89 Gene3D G3DSA:1.10.287.10 3 89 6.2E-38 T 19-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 APA12_RS12375 0dfa55a5decf29a175240a5b28b563d3 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 12 88 2.0E-21 T 19-04-2016 APA12_RS13265 7c4fc920024bef11483942ed44ac2ac5 254 Gene3D G3DSA:1.25.40.10 125 247 1.6E-9 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS13265 7c4fc920024bef11483942ed44ac2ac5 254 SUPERFAMILY SSF48452 126 250 6.24E-10 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS13265 7c4fc920024bef11483942ed44ac2ac5 254 Pfam PF13432 Tetratricopeptide repeat 135 198 5.1E-6 T 19-04-2016 APA12_RS07735 4807e3cd6bbd421f4ef523dd8193a303 526 SMART SM00729 163 376 1.4E-4 T 19-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APA12_RS07735 4807e3cd6bbd421f4ef523dd8193a303 526 SUPERFAMILY SSF102114 149 371 8.11E-21 T 19-04-2016 APA12_RS07735 4807e3cd6bbd421f4ef523dd8193a303 526 Pfam PF02310 B12 binding domain 23 121 9.7E-8 T 19-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 APA12_RS07735 4807e3cd6bbd421f4ef523dd8193a303 526 Gene3D G3DSA:3.80.30.20 165 361 9.8E-27 T 19-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APA12_RS07735 4807e3cd6bbd421f4ef523dd8193a303 526 PANTHER PTHR11918:SF65 29 500 5.9E-165 T 19-04-2016 APA12_RS07735 4807e3cd6bbd421f4ef523dd8193a303 526 PANTHER PTHR11918 29 500 5.9E-165 T 19-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein APA12_RS07735 4807e3cd6bbd421f4ef523dd8193a303 526 Pfam PF04055 Radical SAM superfamily 167 323 1.4E-10 T 19-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APA12_RS07735 4807e3cd6bbd421f4ef523dd8193a303 526 Pfam PF13282 Domain of unknown function (DUF4070) 355 497 6.8E-28 T 19-04-2016 IPR025274 Domain of unknown function DUF4070 APA12_RS05540 a5b10371f44285890637e67e317f5fff 426 Pfam PF00113 Enolase, C-terminal TIM barrel domain 140 424 1.6E-130 T 19-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APA12_RS05540 a5b10371f44285890637e67e317f5fff 426 Hamap MF_00318 Enolase [eno]. 2 411 44.272 T 19-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APA12_RS05540 a5b10371f44285890637e67e317f5fff 426 PIRSF PIRSF001400 1 425 1.3E-187 T 19-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APA12_RS05540 a5b10371f44285890637e67e317f5fff 426 SMART SM01192 139 425 3.4E-220 T 19-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APA12_RS05540 a5b10371f44285890637e67e317f5fff 426 Gene3D G3DSA:3.30.390.10 4 125 5.6E-53 T 19-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APA12_RS05540 a5b10371f44285890637e67e317f5fff 426 Pfam PF03952 Enolase, N-terminal domain 4 134 7.3E-58 T 19-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APA12_RS05540 a5b10371f44285890637e67e317f5fff 426 PANTHER PTHR11902 1 420 8.6E-255 T 19-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APA12_RS05540 a5b10371f44285890637e67e317f5fff 426 SMART SM01193 4 134 5.9E-90 T 19-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APA12_RS05540 a5b10371f44285890637e67e317f5fff 426 Gene3D G3DSA:3.20.20.120 128 424 3.3E-132 T 19-04-2016 IPR029065 Enolase C-terminal domain-like APA12_RS05540 a5b10371f44285890637e67e317f5fff 426 SUPERFAMILY SSF51604 139 423 2.31E-124 T 19-04-2016 IPR029065 Enolase C-terminal domain-like APA12_RS05540 a5b10371f44285890637e67e317f5fff 426 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 424 2.6E-206 T 19-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APA12_RS05540 a5b10371f44285890637e67e317f5fff 426 ProSitePatterns PS00164 Enolase signature. 334 347 - T 19-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APA12_RS05540 a5b10371f44285890637e67e317f5fff 426 SUPERFAMILY SSF54826 4 141 5.58E-55 T 19-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APA12_RS05540 a5b10371f44285890637e67e317f5fff 426 PRINTS PR00148 Enolase signature 37 51 5.0E-48 T 19-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APA12_RS05540 a5b10371f44285890637e67e317f5fff 426 PRINTS PR00148 Enolase signature 161 174 5.0E-48 T 19-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APA12_RS05540 a5b10371f44285890637e67e317f5fff 426 PRINTS PR00148 Enolase signature 311 322 5.0E-48 T 19-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APA12_RS05540 a5b10371f44285890637e67e317f5fff 426 PRINTS PR00148 Enolase signature 334 348 5.0E-48 T 19-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APA12_RS05540 a5b10371f44285890637e67e317f5fff 426 PRINTS PR00148 Enolase signature 107 123 5.0E-48 T 19-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APA12_RS05540 a5b10371f44285890637e67e317f5fff 426 PRINTS PR00148 Enolase signature 363 380 5.0E-48 T 19-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APA12_RS08250 ba8f5819043882221f38ddf1247a83f5 269 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 255 35.06 T 19-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 APA12_RS08250 ba8f5819043882221f38ddf1247a83f5 269 SUPERFAMILY SSF53067 124 253 1.61E-37 T 19-04-2016 APA12_RS08250 ba8f5819043882221f38ddf1247a83f5 269 Pfam PF03309 Type III pantothenate kinase 2 208 7.6E-68 T 19-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 APA12_RS08250 ba8f5819043882221f38ddf1247a83f5 269 Gene3D G3DSA:3.30.420.40 95 254 5.8E-49 T 19-04-2016 APA12_RS08250 ba8f5819043882221f38ddf1247a83f5 269 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 2 250 6.1E-63 T 19-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 APA12_RS08250 ba8f5819043882221f38ddf1247a83f5 269 SUPERFAMILY SSF53067 2 122 6.47E-31 T 19-04-2016 APA12_RS08250 ba8f5819043882221f38ddf1247a83f5 269 PANTHER PTHR34265 1 269 3.6E-65 T 19-04-2016 APA12_RS07540 5688b43fc50d8d1176caa0c69323aa37 76 Pfam PF02609 Exonuclease VII small subunit 10 60 4.2E-19 T 19-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APA12_RS07540 5688b43fc50d8d1176caa0c69323aa37 76 SUPERFAMILY SSF116842 3 74 1.57E-21 T 19-04-2016 APA12_RS07540 5688b43fc50d8d1176caa0c69323aa37 76 PANTHER PTHR34137 1 76 8.2E-20 T 19-04-2016 APA12_RS07540 5688b43fc50d8d1176caa0c69323aa37 76 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 9 64 2.5E-22 T 19-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APA12_RS07540 5688b43fc50d8d1176caa0c69323aa37 76 Gene3D G3DSA:1.10.287.1040 4 74 2.6E-26 T 19-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APA12_RS07540 5688b43fc50d8d1176caa0c69323aa37 76 PIRSF PIRSF006488 1 74 2.5E-21 T 19-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APA12_RS07540 5688b43fc50d8d1176caa0c69323aa37 76 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 9 69 15.718 T 19-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APA12_RS07540 5688b43fc50d8d1176caa0c69323aa37 76 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 9 49 5.0E-15 T 19-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APA12_RS03430 d32dfb9caceca5ea40305ce6b7ef467b 277 Gene3D G3DSA:2.40.33.20 167 268 9.7E-4 T 19-04-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like APA12_RS03430 d32dfb9caceca5ea40305ce6b7ef467b 277 PANTHER PTHR14237 6 271 4.0E-82 T 19-04-2016 APA12_RS03430 d32dfb9caceca5ea40305ce6b7ef467b 277 Pfam PF03476 MOSC N-terminal beta barrel domain 5 118 1.4E-23 T 19-04-2016 IPR005303 MOSC, N-terminal beta barrel APA12_RS03430 d32dfb9caceca5ea40305ce6b7ef467b 277 SUPERFAMILY SSF50800 151 268 4.53E-21 T 19-04-2016 IPR011037 Pyruvate kinase-like, insert domain APA12_RS03430 d32dfb9caceca5ea40305ce6b7ef467b 277 SUPERFAMILY SSF50800 5 52 4.53E-21 T 19-04-2016 IPR011037 Pyruvate kinase-like, insert domain APA12_RS03430 d32dfb9caceca5ea40305ce6b7ef467b 277 PANTHER PTHR14237:SF30 6 271 4.0E-82 T 19-04-2016 APA12_RS03430 d32dfb9caceca5ea40305ce6b7ef467b 277 SUPERFAMILY SSF141673 6 132 6.8E-33 T 19-04-2016 APA12_RS03430 d32dfb9caceca5ea40305ce6b7ef467b 277 Pfam PF03473 MOSC domain 142 266 8.0E-32 T 19-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 APA12_RS04240 62a4cc3502b1d89045f5964059f33c6d 115 Pfam PF05717 IS66 Orf2 like protein 9 105 5.0E-39 T 19-04-2016 IPR008878 Transposase IS66, Orf2 APA12_RS04240 62a4cc3502b1d89045f5964059f33c6d 115 PANTHER PTHR36455 2 105 4.9E-37 T 19-04-2016 APA12_RS10990 62a4cc3502b1d89045f5964059f33c6d 115 Pfam PF05717 IS66 Orf2 like protein 9 105 5.0E-39 T 19-04-2016 IPR008878 Transposase IS66, Orf2 APA12_RS10990 62a4cc3502b1d89045f5964059f33c6d 115 PANTHER PTHR36455 2 105 4.9E-37 T 19-04-2016 APA12_RS09225 62a4cc3502b1d89045f5964059f33c6d 115 Pfam PF05717 IS66 Orf2 like protein 9 105 5.0E-39 T 19-04-2016 IPR008878 Transposase IS66, Orf2 APA12_RS09225 62a4cc3502b1d89045f5964059f33c6d 115 PANTHER PTHR36455 2 105 4.9E-37 T 19-04-2016 APA12_RS00895 62a4cc3502b1d89045f5964059f33c6d 115 Pfam PF05717 IS66 Orf2 like protein 9 105 5.0E-39 T 19-04-2016 IPR008878 Transposase IS66, Orf2 APA12_RS00895 62a4cc3502b1d89045f5964059f33c6d 115 PANTHER PTHR36455 2 105 4.9E-37 T 19-04-2016 APA12_RS09065 62a4cc3502b1d89045f5964059f33c6d 115 Pfam PF05717 IS66 Orf2 like protein 9 105 5.0E-39 T 19-04-2016 IPR008878 Transposase IS66, Orf2 APA12_RS09065 62a4cc3502b1d89045f5964059f33c6d 115 PANTHER PTHR36455 2 105 4.9E-37 T 19-04-2016 APA12_RS05065 f7aae16e1f5adae5dab0900c22cc6870 616 ProSitePatterns PS00211 ABC transporters family signature. 514 528 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APA12_RS05065 f7aae16e1f5adae5dab0900c22cc6870 616 SUPERFAMILY SSF52540 371 613 1.47E-86 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05065 f7aae16e1f5adae5dab0900c22cc6870 616 SUPERFAMILY SSF90123 40 361 9.68E-36 T 19-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APA12_RS05065 f7aae16e1f5adae5dab0900c22cc6870 616 Pfam PF00005 ABC transporter 393 542 5.5E-31 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS05065 f7aae16e1f5adae5dab0900c22cc6870 616 Pfam PF00664 ABC transporter transmembrane region 71 322 3.9E-14 T 19-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APA12_RS05065 f7aae16e1f5adae5dab0900c22cc6870 616 Gene3D G3DSA:1.20.1560.10 45 334 5.1E-28 T 19-04-2016 APA12_RS05065 f7aae16e1f5adae5dab0900c22cc6870 616 PANTHER PTHR24221 30 613 4.0E-161 T 19-04-2016 APA12_RS05065 f7aae16e1f5adae5dab0900c22cc6870 616 SMART SM00382 402 588 2.9E-17 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS05065 f7aae16e1f5adae5dab0900c22cc6870 616 Gene3D G3DSA:3.40.50.300 377 605 3.3E-79 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS06655 13388f60a1b0a5b7a792c26a81c94f88 711 Pfam PF06628 Catalase-related immune-responsive 464 527 4.3E-21 T 19-04-2016 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APA12_RS06655 13388f60a1b0a5b7a792c26a81c94f88 711 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 379 387 - T 19-04-2016 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APA12_RS06655 13388f60a1b0a5b7a792c26a81c94f88 711 SUPERFAMILY SSF52317 562 706 1.12E-18 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like APA12_RS06655 13388f60a1b0a5b7a792c26a81c94f88 711 PANTHER PTHR11465 27 597 0.0 T 19-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APA12_RS06655 13388f60a1b0a5b7a792c26a81c94f88 711 PIRSF PIRSF038927 16 711 1.4E-303 T 19-04-2016 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APA12_RS06655 13388f60a1b0a5b7a792c26a81c94f88 711 Pfam PF00199 Catalase 49 433 5.7E-176 T 19-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APA12_RS06655 13388f60a1b0a5b7a792c26a81c94f88 711 ProSitePatterns PS00438 Catalase proximal active site signature. 85 101 - T 19-04-2016 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APA12_RS06655 13388f60a1b0a5b7a792c26a81c94f88 711 SUPERFAMILY SSF56634 42 539 3.14E-212 T 19-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APA12_RS06655 13388f60a1b0a5b7a792c26a81c94f88 711 PRINTS PR00067 Catalase signature 334 361 2.6E-65 T 19-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APA12_RS06655 13388f60a1b0a5b7a792c26a81c94f88 711 PRINTS PR00067 Catalase signature 125 143 2.6E-65 T 19-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APA12_RS06655 13388f60a1b0a5b7a792c26a81c94f88 711 PRINTS PR00067 Catalase signature 366 392 2.6E-65 T 19-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APA12_RS06655 13388f60a1b0a5b7a792c26a81c94f88 711 PRINTS PR00067 Catalase signature 165 183 2.6E-65 T 19-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APA12_RS06655 13388f60a1b0a5b7a792c26a81c94f88 711 PRINTS PR00067 Catalase signature 62 85 2.6E-65 T 19-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APA12_RS06655 13388f60a1b0a5b7a792c26a81c94f88 711 PRINTS PR00067 Catalase signature 146 163 2.6E-65 T 19-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APA12_RS06655 13388f60a1b0a5b7a792c26a81c94f88 711 Gene3D G3DSA:3.40.50.880 563 709 2.6E-41 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like APA12_RS06655 13388f60a1b0a5b7a792c26a81c94f88 711 SMART SM01060 49 437 7.4E-265 T 19-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APA12_RS06655 13388f60a1b0a5b7a792c26a81c94f88 711 Gene3D G3DSA:2.40.180.10 31 404 1.4E-175 T 19-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APA12_RS06655 13388f60a1b0a5b7a792c26a81c94f88 711 PANTHER PTHR11465:SF7 27 597 0.0 T 19-04-2016 APA12_RS07985 380d0660f04dbdf691649cc0f522c3a4 458 SUPERFAMILY SSF103473 245 444 5.62E-57 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS07985 380d0660f04dbdf691649cc0f522c3a4 458 SUPERFAMILY SSF103473 5 197 5.62E-57 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS07985 380d0660f04dbdf691649cc0f522c3a4 458 Pfam PF07690 Major Facilitator Superfamily 19 406 5.9E-41 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APA12_RS07985 380d0660f04dbdf691649cc0f522c3a4 458 PANTHER PTHR23501 9 451 4.3E-115 T 19-04-2016 APA12_RS07985 380d0660f04dbdf691649cc0f522c3a4 458 Gene3D G3DSA:1.20.1250.20 259 417 1.6E-15 T 19-04-2016 APA12_RS07985 380d0660f04dbdf691649cc0f522c3a4 458 Gene3D G3DSA:1.20.1250.20 11 194 7.6E-23 T 19-04-2016 APA12_RS07985 380d0660f04dbdf691649cc0f522c3a4 458 PANTHER PTHR23501:SF5 9 451 4.3E-115 T 19-04-2016 APA12_RS00165 dfb699b2617010f1b131a56edbebfff5 260 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 171 182 - T 19-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APA12_RS00165 dfb699b2617010f1b131a56edbebfff5 260 PANTHER PTHR11921 1 260 1.0E-151 T 19-04-2016 APA12_RS00165 dfb699b2617010f1b131a56edbebfff5 260 Pfam PF13534 4Fe-4S dicluster domain 170 243 2.1E-8 T 19-04-2016 APA12_RS00165 dfb699b2617010f1b131a56edbebfff5 260 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 29 130 8.0E-31 T 19-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 APA12_RS00165 dfb699b2617010f1b131a56edbebfff5 260 Gene3D G3DSA:3.10.20.30 23 127 6.5E-41 T 19-04-2016 IPR012675 Beta-grasp domain APA12_RS00165 dfb699b2617010f1b131a56edbebfff5 260 Gene3D G3DSA:1.10.1060.10 132 258 2.7E-45 T 19-04-2016 APA12_RS00165 dfb699b2617010f1b131a56edbebfff5 260 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 32 252 6.7E-79 T 19-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 APA12_RS00165 dfb699b2617010f1b131a56edbebfff5 260 SUPERFAMILY SSF46548 132 258 2.09E-35 T 19-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APA12_RS00165 dfb699b2617010f1b131a56edbebfff5 260 SUPERFAMILY SSF54292 28 127 5.52E-31 T 19-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APA12_RS00165 dfb699b2617010f1b131a56edbebfff5 260 PANTHER PTHR11921:SF27 1 260 1.0E-151 T 19-04-2016 APA12_RS00165 dfb699b2617010f1b131a56edbebfff5 260 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 80 88 - T 19-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 APA12_RS06870 30d109f5b9dcbc050d203ffd4635cd5d 177 Gene3D G3DSA:1.10.10.10 113 175 3.3E-11 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS06870 30d109f5b9dcbc050d203ffd4635cd5d 177 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 173 1.9E-22 T 19-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS06870 30d109f5b9dcbc050d203ffd4635cd5d 177 Gene3D G3DSA:1.10.1740.10 16 83 5.1E-14 T 19-04-2016 APA12_RS06870 30d109f5b9dcbc050d203ffd4635cd5d 177 Pfam PF04542 Sigma-70 region 2 17 83 2.3E-15 T 19-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS06870 30d109f5b9dcbc050d203ffd4635cd5d 177 SUPERFAMILY SSF88659 102 174 2.06E-11 T 19-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS06870 30d109f5b9dcbc050d203ffd4635cd5d 177 PANTHER PTHR30173 16 175 5.7E-30 T 19-04-2016 APA12_RS06870 30d109f5b9dcbc050d203ffd4635cd5d 177 Pfam PF08281 Sigma-70, region 4 118 167 3.2E-11 T 19-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS06870 30d109f5b9dcbc050d203ffd4635cd5d 177 SUPERFAMILY SSF88946 14 90 2.28E-15 T 19-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APA12_RS06735 1fafd9283b6334fcbb8bc8f2303c2768 1014 SUPERFAMILY SSF82866 302 490 1.57E-32 T 19-04-2016 APA12_RS06735 1fafd9283b6334fcbb8bc8f2303c2768 1014 Gene3D G3DSA:1.10.3850.10 792 1005 1.3E-50 T 19-04-2016 APA12_RS06735 1fafd9283b6334fcbb8bc8f2303c2768 1014 SUPERFAMILY SSF82866 789 1007 1.02E-41 T 19-04-2016 APA12_RS06735 1fafd9283b6334fcbb8bc8f2303c2768 1014 PANTHER PTHR32063 6 1011 0.0 T 19-04-2016 APA12_RS06735 1fafd9283b6334fcbb8bc8f2303c2768 1014 SUPERFAMILY SSF82693 45 130 2.44E-13 T 19-04-2016 APA12_RS06735 1fafd9283b6334fcbb8bc8f2303c2768 1014 Gene3D G3DSA:3.30.2090.10 187 266 9.8E-6 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APA12_RS06735 1fafd9283b6334fcbb8bc8f2303c2768 1014 Pfam PF00873 AcrB/AcrD/AcrF family 10 1003 1.8E-134 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS06735 1fafd9283b6334fcbb8bc8f2303c2768 1014 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.8E-13 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS06735 1fafd9283b6334fcbb8bc8f2303c2768 1014 PRINTS PR00702 Acriflavin resistance protein family signature 327 350 1.8E-13 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS06735 1fafd9283b6334fcbb8bc8f2303c2768 1014 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.8E-13 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS06735 1fafd9283b6334fcbb8bc8f2303c2768 1014 PRINTS PR00702 Acriflavin resistance protein family signature 43 61 1.8E-13 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS06735 1fafd9283b6334fcbb8bc8f2303c2768 1014 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.8E-13 T 19-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APA12_RS06735 1fafd9283b6334fcbb8bc8f2303c2768 1014 SUPERFAMILY SSF82714 187 265 3.92E-6 T 19-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APA12_RS06735 1fafd9283b6334fcbb8bc8f2303c2768 1014 SUPERFAMILY SSF82693 552 642 1.62E-5 T 19-04-2016 APA12_RS06735 1fafd9283b6334fcbb8bc8f2303c2768 1014 SUPERFAMILY SSF82693 142 184 5.06E-12 T 19-04-2016 APA12_RS06735 1fafd9283b6334fcbb8bc8f2303c2768 1014 SUPERFAMILY SSF82693 269 325 5.06E-12 T 19-04-2016 APA12_RS06735 1fafd9283b6334fcbb8bc8f2303c2768 1014 Gene3D G3DSA:1.20.1640.10 287 495 4.8E-41 T 19-04-2016 APA12_RS06735 1fafd9283b6334fcbb8bc8f2303c2768 1014 PANTHER PTHR32063:SF18 6 1011 0.0 T 19-04-2016 APA12_RS06735 1fafd9283b6334fcbb8bc8f2303c2768 1014 Gene3D G3DSA:3.30.70.1430 556 643 9.8E-4 T 19-04-2016 APA12_RS06735 1fafd9283b6334fcbb8bc8f2303c2768 1014 Gene3D G3DSA:3.30.70.1430 45 130 4.2E-16 T 19-04-2016 APA12_RS11890 9a5c9b931c90d919698141e9f80e175c 204 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 11 181 1.9E-36 T 19-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain APA12_RS11890 9a5c9b931c90d919698141e9f80e175c 204 Gene3D G3DSA:3.40.50.300 9 198 5.3E-18 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS11890 9a5c9b931c90d919698141e9f80e175c 204 PIRSF PIRSF005624 3 204 5.1E-48 T 19-04-2016 APA12_RS11890 9a5c9b931c90d919698141e9f80e175c 204 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 9 199 1.0E-102 T 19-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 APA12_RS11890 9a5c9b931c90d919698141e9f80e175c 204 Hamap MF_01389 Urease accessory protein UreG [ureG]. 7 202 46.943 T 19-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 APA12_RS11890 9a5c9b931c90d919698141e9f80e175c 204 SUPERFAMILY SSF52540 7 200 6.58E-35 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS11890 9a5c9b931c90d919698141e9f80e175c 204 PANTHER PTHR31715 3 204 1.3E-127 T 19-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 APA12_RS07425 75a95960ef2ac6e6e5ca7bd0602bbdd9 624 Pfam PF13502 AsmA-like C-terminal region 382 550 8.6E-10 T 19-04-2016 IPR032712 AsmA-like, C-terminal APA12_RS12970 a36646983889cda34561b01ca4d86776 213 ProSitePatterns PS01081 TetR-type HTH domain signature. 37 67 - T 19-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site APA12_RS12970 a36646983889cda34561b01ca4d86776 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 70 1.2E-19 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APA12_RS12970 a36646983889cda34561b01ca4d86776 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 69 8.6E-11 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APA12_RS12970 a36646983889cda34561b01ca4d86776 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 25 38 8.6E-11 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APA12_RS12970 a36646983889cda34561b01ca4d86776 213 PANTHER PTHR30055 8 211 1.4E-38 T 19-04-2016 APA12_RS12970 a36646983889cda34561b01ca4d86776 213 SUPERFAMILY SSF48498 91 183 1.48E-10 T 19-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APA12_RS12970 a36646983889cda34561b01ca4d86776 213 SUPERFAMILY SSF46689 16 95 6.91E-21 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS12970 a36646983889cda34561b01ca4d86776 213 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 157 211 7.9E-13 T 19-04-2016 APA12_RS12970 a36646983889cda34561b01ca4d86776 213 Gene3D G3DSA:1.10.357.10 16 213 1.3E-66 T 19-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APA12_RS12970 a36646983889cda34561b01ca4d86776 213 PANTHER PTHR30055:SF76 8 211 1.4E-38 T 19-04-2016 APA12_RS04840 6ed49ba85473b08e0edd008c5d291b47 254 SUPERFAMILY SSF161098 57 241 5.76E-26 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS04840 6ed49ba85473b08e0edd008c5d291b47 254 PANTHER PTHR30151 10 254 8.7E-55 T 19-04-2016 APA12_RS04840 6ed49ba85473b08e0edd008c5d291b47 254 PANTHER PTHR30151:SF8 10 254 8.7E-55 T 19-04-2016 APA12_RS04840 6ed49ba85473b08e0edd008c5d291b47 254 Gene3D G3DSA:1.10.3720.10 60 250 4.4E-21 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS04840 6ed49ba85473b08e0edd008c5d291b47 254 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 250 4.8E-17 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS02075 c81356cb26d8b1d39a814349b4e7ec58 200 PANTHER PTHR23029 10 199 7.4E-35 T 19-04-2016 APA12_RS02075 c81356cb26d8b1d39a814349b4e7ec58 200 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 11 169 6.5E-34 T 19-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APA12_RS02075 c81356cb26d8b1d39a814349b4e7ec58 200 PANTHER PTHR23029:SF1 10 199 7.4E-35 T 19-04-2016 APA12_RS02075 c81356cb26d8b1d39a814349b4e7ec58 200 Gene3D G3DSA:3.40.50.1240 11 197 4.5E-42 T 19-04-2016 IPR029033 Histidine phosphatase superfamily APA12_RS02075 c81356cb26d8b1d39a814349b4e7ec58 200 SUPERFAMILY SSF53254 10 195 2.72E-38 T 19-04-2016 IPR029033 Histidine phosphatase superfamily APA12_RS02075 c81356cb26d8b1d39a814349b4e7ec58 200 SMART SM00855 8 164 9.8E-18 T 19-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APA12_RS01140 bd4fdfad8fa694caa65d45c15e0473c6 382 Gene3D G3DSA:3.40.630.30 182 327 8.7E-20 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase APA12_RS01140 bd4fdfad8fa694caa65d45c15e0473c6 382 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 11 379 1.4E-153 T 19-04-2016 IPR007434 Peptidogalycan biosysnthesis/recognition APA12_RS01140 bd4fdfad8fa694caa65d45c15e0473c6 382 PANTHER PTHR31384 48 313 3.1E-58 T 19-04-2016 APA12_RS01140 bd4fdfad8fa694caa65d45c15e0473c6 382 SUPERFAMILY SSF55729 182 348 1.06E-38 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase APA12_RS10440 68ecae3f9eda72a9626cf2457df5ceb6 210 PANTHER PTHR30055 1 195 1.6E-55 T 19-04-2016 APA12_RS10440 68ecae3f9eda72a9626cf2457df5ceb6 210 SUPERFAMILY SSF48498 83 195 2.53E-20 T 19-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APA12_RS10440 68ecae3f9eda72a9626cf2457df5ceb6 210 Gene3D G3DSA:1.10.357.10 11 195 7.0E-37 T 19-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APA12_RS10440 68ecae3f9eda72a9626cf2457df5ceb6 210 PANTHER PTHR30055:SF20 1 195 1.6E-55 T 19-04-2016 APA12_RS10440 68ecae3f9eda72a9626cf2457df5ceb6 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 7.3E-15 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APA12_RS10440 68ecae3f9eda72a9626cf2457df5ceb6 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 1.4E-8 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APA12_RS10440 68ecae3f9eda72a9626cf2457df5ceb6 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 1.4E-8 T 19-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APA12_RS10440 68ecae3f9eda72a9626cf2457df5ceb6 210 Pfam PF16925 Bacterial transcriptional repressor C-terminal 102 194 7.6E-10 T 19-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APA12_RS10440 68ecae3f9eda72a9626cf2457df5ceb6 210 SUPERFAMILY SSF46689 4 69 2.82E-16 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS13445 cf7686416d04f56f713b484c0397a634 144 PANTHER PTHR21256:SF16 28 136 1.9E-34 T 19-04-2016 APA12_RS13445 cf7686416d04f56f713b484c0397a634 144 SUPERFAMILY SSF101386 36 124 1.79E-20 T 19-04-2016 APA12_RS13445 cf7686416d04f56f713b484c0397a634 144 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 37 120 8.4E-27 T 19-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 APA12_RS13445 cf7686416d04f56f713b484c0397a634 144 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 38 123 4.0E-18 T 19-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 APA12_RS13445 cf7686416d04f56f713b484c0397a634 144 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 34 120 18.628 T 19-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 APA12_RS13445 cf7686416d04f56f713b484c0397a634 144 PANTHER PTHR21256 28 136 1.9E-34 T 19-04-2016 APA12_RS02165 571e4dc131febd919d0903fbd1286ea2 488 Pfam PF00474 Sodium:solute symporter family 33 427 3.2E-26 T 19-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APA12_RS02165 571e4dc131febd919d0903fbd1286ea2 488 PANTHER PTHR11819:SF94 2 427 3.3E-61 T 19-04-2016 IPR031155 Urea active transporter GO:0015204|GO:0016021|GO:0071918 APA12_RS02165 571e4dc131febd919d0903fbd1286ea2 488 PANTHER PTHR11819 2 427 3.3E-61 T 19-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APA12_RS12545 6cc28696a2901cf360ba5c82e9bc92df 195 Gene3D G3DSA:1.20.120.20 42 150 3.2E-4 T 19-04-2016 APA12_RS12545 6cc28696a2901cf360ba5c82e9bc92df 195 SUPERFAMILY SSF58113 38 183 6.02E-5 T 19-04-2016 APA12_RS06190 42895eb16bb3ec8b9cc72f8894f8fdb6 114 PANTHER PTHR34182 2 112 7.9E-19 T 19-04-2016 APA12_RS06190 42895eb16bb3ec8b9cc72f8894f8fdb6 114 Pfam PF03840 Preprotein translocase SecG subunit 5 72 3.2E-18 T 19-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APA12_RS06190 42895eb16bb3ec8b9cc72f8894f8fdb6 114 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 72 3.4E-20 T 19-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APA12_RS06190 42895eb16bb3ec8b9cc72f8894f8fdb6 114 PRINTS PR01651 Protein-export SecG membrane protein signature 37 53 6.2E-15 T 19-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APA12_RS06190 42895eb16bb3ec8b9cc72f8894f8fdb6 114 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 6.2E-15 T 19-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APA12_RS06190 42895eb16bb3ec8b9cc72f8894f8fdb6 114 PRINTS PR01651 Protein-export SecG membrane protein signature 53 75 6.2E-15 T 19-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APA12_RS00850 bf9825a1c5e3ab86c609c6c84e8f83ff 461 Pfam PF13701 Transposase DDE domain group 1 13 458 3.2E-165 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS00850 bf9825a1c5e3ab86c609c6c84e8f83ff 461 SUPERFAMILY SSF53098 158 398 1.21E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS00865 bf9825a1c5e3ab86c609c6c84e8f83ff 461 Pfam PF13701 Transposase DDE domain group 1 13 458 3.2E-165 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS00865 bf9825a1c5e3ab86c609c6c84e8f83ff 461 SUPERFAMILY SSF53098 158 398 1.21E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS06175 35a3c01b27fdfb1f4d16d63235a315b0 513 PANTHER PTHR11236 1 504 4.0E-206 T 19-04-2016 APA12_RS06175 35a3c01b27fdfb1f4d16d63235a315b0 513 PANTHER PTHR11236:SF9 1 504 4.0E-206 T 19-04-2016 APA12_RS06175 35a3c01b27fdfb1f4d16d63235a315b0 513 Pfam PF00425 chorismate binding enzyme 239 493 2.3E-95 T 19-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal APA12_RS06175 35a3c01b27fdfb1f4d16d63235a315b0 513 Pfam PF04715 Anthranilate synthase component I, N terminal region 35 183 2.3E-28 T 19-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APA12_RS06175 35a3c01b27fdfb1f4d16d63235a315b0 513 SUPERFAMILY SSF56322 27 502 7.2E-150 T 19-04-2016 IPR005801 ADC synthase GO:0009058 APA12_RS06175 35a3c01b27fdfb1f4d16d63235a315b0 513 PRINTS PR00095 Anthranilate synthase component I signature 450 464 7.9E-21 T 19-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APA12_RS06175 35a3c01b27fdfb1f4d16d63235a315b0 513 PRINTS PR00095 Anthranilate synthase component I signature 435 449 7.9E-21 T 19-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APA12_RS06175 35a3c01b27fdfb1f4d16d63235a315b0 513 PRINTS PR00095 Anthranilate synthase component I signature 341 354 7.9E-21 T 19-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APA12_RS06175 35a3c01b27fdfb1f4d16d63235a315b0 513 PRINTS PR00095 Anthranilate synthase component I signature 355 368 7.9E-21 T 19-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APA12_RS06175 35a3c01b27fdfb1f4d16d63235a315b0 513 Gene3D G3DSA:3.60.120.10 25 504 7.0E-164 T 19-04-2016 IPR005801 ADC synthase GO:0009058 APA12_RS06175 35a3c01b27fdfb1f4d16d63235a315b0 513 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 34 501 8.5E-164 T 19-04-2016 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APA12_RS06130 f48476858c2844d9d8154861727aad6b 326 TIGRFAM TIGR00510 lipA: lipoyl synthase 25 314 3.5E-112 T 19-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APA12_RS06130 f48476858c2844d9d8154861727aad6b 326 Gene3D G3DSA:3.20.20.70 49 317 6.5E-70 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS06130 f48476858c2844d9d8154861727aad6b 326 Hamap MF_00206 Lipoyl synthase [lipA]. 1 319 146.777 T 19-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APA12_RS06130 f48476858c2844d9d8154861727aad6b 326 PANTHER PTHR10949 29 312 6.5E-156 T 19-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APA12_RS06130 f48476858c2844d9d8154861727aad6b 326 SMART SM00729 81 294 6.4E-7 T 19-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APA12_RS06130 f48476858c2844d9d8154861727aad6b 326 PIRSF PIRSF005963 6 326 1.8E-133 T 19-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APA12_RS06130 f48476858c2844d9d8154861727aad6b 326 SUPERFAMILY SSF102114 46 310 3.66E-64 T 19-04-2016 APA12_RS06130 f48476858c2844d9d8154861727aad6b 326 Pfam PF04055 Radical SAM superfamily 87 247 1.7E-11 T 19-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APA12_RS09390 44d951c9e320d47dd32e930a2e3601b2 161 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 20 156 3.2E-44 T 19-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APA12_RS09390 44d951c9e320d47dd32e930a2e3601b2 161 PANTHER PTHR21058 20 160 2.8E-51 T 19-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APA12_RS09390 44d951c9e320d47dd32e930a2e3601b2 161 SUPERFAMILY SSF52121 18 159 5.63E-50 T 19-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APA12_RS09390 44d951c9e320d47dd32e930a2e3601b2 161 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 20 154 6.8E-40 T 19-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APA12_RS09390 44d951c9e320d47dd32e930a2e3601b2 161 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 14 159 25.72 T 19-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APA12_RS09390 44d951c9e320d47dd32e930a2e3601b2 161 Gene3D G3DSA:3.40.50.960 18 160 1.5E-49 T 19-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APA12_RS12275 d00ce574a3439f4b202849ce3380de63 223 SUPERFAMILY SSF56281 8 222 2.62E-49 T 19-04-2016 IPR001279 Metallo-beta-lactamase APA12_RS12275 d00ce574a3439f4b202849ce3380de63 223 PANTHER PTHR11935 1 223 5.5E-83 T 19-04-2016 APA12_RS12275 d00ce574a3439f4b202849ce3380de63 223 SMART SM00849 19 205 1.1E-31 T 19-04-2016 IPR001279 Metallo-beta-lactamase APA12_RS12275 d00ce574a3439f4b202849ce3380de63 223 PANTHER PTHR11935:SF115 1 223 5.5E-83 T 19-04-2016 APA12_RS12275 d00ce574a3439f4b202849ce3380de63 223 Gene3D G3DSA:3.60.15.10 7 222 1.8E-49 T 19-04-2016 IPR001279 Metallo-beta-lactamase APA12_RS12275 d00ce574a3439f4b202849ce3380de63 223 Pfam PF00753 Metallo-beta-lactamase superfamily 16 205 6.7E-26 T 19-04-2016 IPR001279 Metallo-beta-lactamase APA12_RS09345 8fc866293318f8a1cb8de21fe7087681 382 Gene3D G3DSA:3.60.21.10 1 223 2.5E-32 T 19-04-2016 IPR029052 Metallo-dependent phosphatase-like APA12_RS09345 8fc866293318f8a1cb8de21fe7087681 382 SUPERFAMILY SSF56300 1 296 3.23E-31 T 19-04-2016 IPR029052 Metallo-dependent phosphatase-like APA12_RS09345 8fc866293318f8a1cb8de21fe7087681 382 PANTHER PTHR30337 1 89 6.5E-16 T 19-04-2016 APA12_RS09345 8fc866293318f8a1cb8de21fe7087681 382 PIRSF PIRSF033093 1 380 1.2E-76 T 19-04-2016 IPR014577 Uncharacterised conserved protein UCP033093, metallophosphoesterase-type APA12_RS09345 8fc866293318f8a1cb8de21fe7087681 382 Pfam PF00149 Calcineurin-like phosphoesterase 1 95 9.0E-9 T 19-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APA12_RS06475 3fe4641aa2433350b042aabefc536b2f 441 SUPERFAMILY SSF55031 239 350 1.13E-26 T 19-04-2016 IPR011650 Peptidase M20, dimerisation domain APA12_RS06475 3fe4641aa2433350b042aabefc536b2f 441 PANTHER PTHR32494 1 441 5.7E-161 T 19-04-2016 APA12_RS06475 3fe4641aa2433350b042aabefc536b2f 441 Pfam PF01546 Peptidase family M20/M25/M40 104 434 1.1E-28 T 19-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APA12_RS06475 3fe4641aa2433350b042aabefc536b2f 441 PIRSF PIRSF001235 33 440 1.3E-129 T 19-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 APA12_RS06475 3fe4641aa2433350b042aabefc536b2f 441 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 52 432 1.1E-110 T 19-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 APA12_RS06475 3fe4641aa2433350b042aabefc536b2f 441 SUPERFAMILY SSF53187 33 249 2.35E-73 T 19-04-2016 APA12_RS06475 3fe4641aa2433350b042aabefc536b2f 441 SUPERFAMILY SSF53187 362 435 2.35E-73 T 19-04-2016 APA12_RS06475 3fe4641aa2433350b042aabefc536b2f 441 Gene3D G3DSA:3.40.630.10 30 251 4.0E-98 T 19-04-2016 APA12_RS06475 3fe4641aa2433350b042aabefc536b2f 441 Gene3D G3DSA:3.40.630.10 378 435 4.0E-98 T 19-04-2016 APA12_RS06475 3fe4641aa2433350b042aabefc536b2f 441 Gene3D G3DSA:3.30.70.360 252 355 2.3E-36 T 19-04-2016 IPR011650 Peptidase M20, dimerisation domain APA12_RS06475 3fe4641aa2433350b042aabefc536b2f 441 Pfam PF07687 Peptidase dimerisation domain 243 336 2.8E-5 T 19-04-2016 IPR011650 Peptidase M20, dimerisation domain APA12_RS03070 5957a2b13bbd2413d81b322304b88837 271 Gene3D G3DSA:3.40.50.620 219 269 6.6E-9 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS03070 5957a2b13bbd2413d81b322304b88837 271 SUPERFAMILY SSF52402 158 269 4.81E-11 T 19-04-2016 APA12_RS03070 5957a2b13bbd2413d81b322304b88837 271 Pfam PF00582 Universal stress protein family 220 268 2.7E-6 T 19-04-2016 IPR006016 UspA GO:0006950 APA12_RS13220 2bb4678d90c15c24128b2fc92e982b11 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 105 3.3E-39 T 19-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APA12_RS13220 2bb4678d90c15c24128b2fc92e982b11 108 Gene3D G3DSA:3.40.30.10 3 105 2.4E-38 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS13220 2bb4678d90c15c24128b2fc92e982b11 108 SUPERFAMILY SSF52833 4 108 1.36E-38 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS13220 2bb4678d90c15c24128b2fc92e982b11 108 PANTHER PTHR10438 9 105 2.4E-40 T 19-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APA12_RS13220 2bb4678d90c15c24128b2fc92e982b11 108 Pfam PF00085 Thioredoxin 6 105 7.2E-34 T 19-04-2016 IPR013766 Thioredoxin domain GO:0045454 APA12_RS13220 2bb4678d90c15c24128b2fc92e982b11 108 PRINTS PR00421 Thioredoxin family signature 32 41 4.3E-8 T 19-04-2016 APA12_RS13220 2bb4678d90c15c24128b2fc92e982b11 108 PRINTS PR00421 Thioredoxin family signature 24 32 4.3E-8 T 19-04-2016 APA12_RS13220 2bb4678d90c15c24128b2fc92e982b11 108 PRINTS PR00421 Thioredoxin family signature 72 83 4.3E-8 T 19-04-2016 APA12_RS13220 2bb4678d90c15c24128b2fc92e982b11 108 PIRSF PIRSF000077 2 108 5.7E-43 T 19-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APA12_RS13220 2bb4678d90c15c24128b2fc92e982b11 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 19-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 APA12_RS05660 38df23dac1f6c0d69aec8119348e364a 255 PANTHER PTHR11907 15 239 1.2E-37 T 19-04-2016 APA12_RS05660 38df23dac1f6c0d69aec8119348e364a 255 PANTHER PTHR11907:SF9 15 239 1.2E-37 T 19-04-2016 APA12_RS05660 38df23dac1f6c0d69aec8119348e364a 255 Gene3D G3DSA:3.40.50.2020 69 239 3.7E-25 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like APA12_RS05660 38df23dac1f6c0d69aec8119348e364a 255 Pfam PF00156 Phosphoribosyl transferase domain 184 240 7.4E-8 T 19-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APA12_RS05660 38df23dac1f6c0d69aec8119348e364a 255 SUPERFAMILY SSF53271 66 251 2.49E-32 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like APA12_RS01865 90f700219fb0b682f053c6e9bfeeb909 204 Pfam PF01386 Ribosomal L25p family 7 94 4.7E-25 T 19-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 APA12_RS01865 90f700219fb0b682f053c6e9bfeeb909 204 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 5 186 27.506 T 19-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 APA12_RS01865 90f700219fb0b682f053c6e9bfeeb909 204 Gene3D G3DSA:2.40.240.10 6 96 4.6E-31 T 19-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 APA12_RS01865 90f700219fb0b682f053c6e9bfeeb909 204 PANTHER PTHR33284 4 203 8.0E-58 T 19-04-2016 APA12_RS01865 90f700219fb0b682f053c6e9bfeeb909 204 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 8 182 3.6E-40 T 19-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 APA12_RS01865 90f700219fb0b682f053c6e9bfeeb909 204 SUPERFAMILY SSF50715 5 192 3.66E-52 T 19-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 APA12_RS01865 90f700219fb0b682f053c6e9bfeeb909 204 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 103 187 1.2E-26 T 19-04-2016 IPR020057 Ribosomal protein L25, beta domain APA12_RS01865 90f700219fb0b682f053c6e9bfeeb909 204 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 28 97 3.0E-19 T 19-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 APA12_RS01865 90f700219fb0b682f053c6e9bfeeb909 204 Gene3D G3DSA:2.170.120.20 100 193 1.3E-27 T 19-04-2016 IPR020057 Ribosomal protein L25, beta domain APA12_RS10790 87a2dbd390bce9713fa8349082c1a944 441 Pfam PF13440 Polysaccharide biosynthesis protein 228 346 1.0E-6 T 19-04-2016 APA12_RS10790 87a2dbd390bce9713fa8349082c1a944 441 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 352 423 6.9E-7 T 19-04-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain APA12_RS13335 712cf767529624e7d3e69b3e07ed4e7e 209 PANTHER PTHR36115 1 198 4.0E-31 T 19-04-2016 APA12_RS13335 712cf767529624e7d3e69b3e07ed4e7e 209 PANTHER PTHR36115:SF3 1 198 4.0E-31 T 19-04-2016 APA12_RS13335 712cf767529624e7d3e69b3e07ed4e7e 209 Pfam PF06271 RDD family 31 191 3.4E-29 T 19-04-2016 IPR010432 RDD APA12_RS00330 da9e6e1b914449c1734ed3d155904107 920 PANTHER PTHR32282:SF5 15 352 6.7E-209 T 19-04-2016 APA12_RS00330 da9e6e1b914449c1734ed3d155904107 920 PANTHER PTHR32282:SF5 467 649 6.7E-209 T 19-04-2016 APA12_RS00330 da9e6e1b914449c1734ed3d155904107 920 PANTHER PTHR32282:SF5 718 819 6.7E-209 T 19-04-2016 APA12_RS00330 da9e6e1b914449c1734ed3d155904107 920 Pfam PF00912 Transglycosylase 93 269 1.2E-58 T 19-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 APA12_RS00330 da9e6e1b914449c1734ed3d155904107 920 Pfam PF00905 Penicillin binding protein transpeptidase domain 473 638 1.9E-23 T 19-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 APA12_RS00330 da9e6e1b914449c1734ed3d155904107 920 Pfam PF00905 Penicillin binding protein transpeptidase domain 716 808 1.7E-10 T 19-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 APA12_RS00330 da9e6e1b914449c1734ed3d155904107 920 Pfam PF17092 Penicillin-binding protein OB-like domain 359 471 4.7E-15 T 19-04-2016 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00230+2.4.2.-|KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00514+2.4.2.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.-|UniPathway: UPA00219 APA12_RS00330 da9e6e1b914449c1734ed3d155904107 920 SUPERFAMILY SSF56601 303 355 1.63E-120 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APA12_RS00330 da9e6e1b914449c1734ed3d155904107 920 SUPERFAMILY SSF56601 718 842 1.63E-120 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APA12_RS00330 da9e6e1b914449c1734ed3d155904107 920 SUPERFAMILY SSF56601 251 273 1.63E-120 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APA12_RS00330 da9e6e1b914449c1734ed3d155904107 920 SUPERFAMILY SSF56601 468 649 1.63E-120 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APA12_RS00330 da9e6e1b914449c1734ed3d155904107 920 SUPERFAMILY SSF53955 79 293 2.56E-68 T 19-04-2016 IPR023346 Lysozyme-like domain APA12_RS00330 da9e6e1b914449c1734ed3d155904107 920 Gene3D G3DSA:1.10.3810.10 93 271 9.0E-66 T 19-04-2016 APA12_RS00330 da9e6e1b914449c1734ed3d155904107 920 PANTHER PTHR32282 15 352 6.7E-209 T 19-04-2016 APA12_RS00330 da9e6e1b914449c1734ed3d155904107 920 PANTHER PTHR32282 467 649 6.7E-209 T 19-04-2016 APA12_RS00330 da9e6e1b914449c1734ed3d155904107 920 PANTHER PTHR32282 718 819 6.7E-209 T 19-04-2016 APA12_RS00330 da9e6e1b914449c1734ed3d155904107 920 Gene3D G3DSA:3.40.710.10 719 841 2.8E-124 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APA12_RS00330 da9e6e1b914449c1734ed3d155904107 920 Gene3D G3DSA:3.40.710.10 466 650 2.8E-124 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APA12_RS00330 da9e6e1b914449c1734ed3d155904107 920 Gene3D G3DSA:3.40.710.10 272 355 2.8E-124 T 19-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APA12_RS00330 da9e6e1b914449c1734ed3d155904107 920 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 102 811 3.8E-172 T 19-04-2016 APA12_RS05055 e708ec85de6e84bf6bf0917bebe9c01e 384 PANTHER PTHR33529:SF2 12 342 2.9E-49 T 19-04-2016 APA12_RS05055 e708ec85de6e84bf6bf0917bebe9c01e 384 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 17 365 2.0E-71 T 19-04-2016 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 APA12_RS05055 e708ec85de6e84bf6bf0917bebe9c01e 384 Pfam PF03739 Predicted permease YjgP/YjgQ family 19 360 3.0E-62 T 19-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 APA12_RS05055 e708ec85de6e84bf6bf0917bebe9c01e 384 PANTHER PTHR33529 12 342 2.9E-49 T 19-04-2016 APA12_RS04650 e88bbf34fe3ae43ed56b3b62baf45df4 536 Pfam PF02321 Outer membrane efflux protein 73 266 5.4E-15 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APA12_RS04650 e88bbf34fe3ae43ed56b3b62baf45df4 536 Pfam PF02321 Outer membrane efflux protein 291 473 2.2E-21 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APA12_RS04650 e88bbf34fe3ae43ed56b3b62baf45df4 536 PANTHER PTHR30203 9 494 1.4E-72 T 19-04-2016 APA12_RS04650 e88bbf34fe3ae43ed56b3b62baf45df4 536 SUPERFAMILY SSF56954 10 477 4.45E-90 T 19-04-2016 APA12_RS04650 e88bbf34fe3ae43ed56b3b62baf45df4 536 PANTHER PTHR30203:SF3 9 494 1.4E-72 T 19-04-2016 APA12_RS04650 e88bbf34fe3ae43ed56b3b62baf45df4 536 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 20 475 3.3E-96 T 19-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 APA12_RS04650 e88bbf34fe3ae43ed56b3b62baf45df4 536 Gene3D G3DSA:1.20.1600.10 63 477 2.2E-91 T 19-04-2016 APA12_RS11515 a5280f7d9758f72715b0263bf94117dd 346 PANTHER PTHR10314:SF83 19 343 5.5E-147 T 19-04-2016 APA12_RS11515 a5280f7d9758f72715b0263bf94117dd 346 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 23 318 1.3E-69 T 19-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APA12_RS11515 a5280f7d9758f72715b0263bf94117dd 346 Gene3D G3DSA:3.40.50.1100 20 55 7.3E-60 T 19-04-2016 APA12_RS11515 a5280f7d9758f72715b0263bf94117dd 346 Gene3D G3DSA:3.40.50.1100 164 335 7.3E-60 T 19-04-2016 APA12_RS11515 a5280f7d9758f72715b0263bf94117dd 346 PANTHER PTHR10314 19 343 5.5E-147 T 19-04-2016 APA12_RS11515 a5280f7d9758f72715b0263bf94117dd 346 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 46 64 - T 19-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 APA12_RS11515 a5280f7d9758f72715b0263bf94117dd 346 Gene3D G3DSA:3.40.50.1100 56 158 2.4E-39 T 19-04-2016 APA12_RS11515 a5280f7d9758f72715b0263bf94117dd 346 SUPERFAMILY SSF53686 20 338 5.5E-92 T 19-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APA12_RS10110 b96be7f1d45863bc54d351ac8d124d2c 210 SUPERFAMILY SSF52972 15 202 5.82E-52 T 19-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like APA12_RS10110 b96be7f1d45863bc54d351ac8d124d2c 210 Gene3D G3DSA:3.90.950.10 17 202 3.5E-55 T 19-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like APA12_RS10110 b96be7f1d45863bc54d351ac8d124d2c 210 TIGRFAM TIGR00172 maf: septum formation protein Maf 16 202 1.2E-42 T 19-04-2016 IPR003697 Maf-like protein GO:0005737 APA12_RS10110 b96be7f1d45863bc54d351ac8d124d2c 210 Hamap MF_00528 Septum formation protein Maf [maf]. 16 208 27.687 T 19-04-2016 IPR003697 Maf-like protein GO:0005737 APA12_RS10110 b96be7f1d45863bc54d351ac8d124d2c 210 PIRSF PIRSF006305 12 206 2.9E-46 T 19-04-2016 IPR003697 Maf-like protein GO:0005737 APA12_RS10110 b96be7f1d45863bc54d351ac8d124d2c 210 Pfam PF02545 Maf-like protein 17 202 7.9E-46 T 19-04-2016 IPR003697 Maf-like protein GO:0005737 APA12_RS08810 4f9cd39745f581a567682ed255d9b178 221 Pfam PF01794 Ferric reductase like transmembrane component 71 182 3.9E-15 T 19-04-2016 IPR013130 Ferric reductase transmembrane component-like domain APA12_RS08810 4f9cd39745f581a567682ed255d9b178 221 PANTHER PTHR36964 22 216 1.7E-40 T 19-04-2016 APA12_RS00985 3877490073d4901f9deb03739e56d3e1 432 Pfam PF01593 Flavin containing amine oxidoreductase 12 423 1.8E-24 T 19-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 APA12_RS00985 3877490073d4901f9deb03739e56d3e1 432 SUPERFAMILY SSF51905 390 425 1.21E-33 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS00985 3877490073d4901f9deb03739e56d3e1 432 SUPERFAMILY SSF51905 6 297 1.21E-33 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS00985 3877490073d4901f9deb03739e56d3e1 432 Gene3D G3DSA:3.50.50.60 206 289 1.8E-22 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS00985 3877490073d4901f9deb03739e56d3e1 432 Gene3D G3DSA:3.50.50.60 387 426 1.8E-22 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS00985 3877490073d4901f9deb03739e56d3e1 432 Gene3D G3DSA:3.50.50.60 7 41 1.8E-22 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS00985 3877490073d4901f9deb03739e56d3e1 432 PANTHER PTHR10742 7 423 7.1E-12 T 19-04-2016 APA12_RS00985 3877490073d4901f9deb03739e56d3e1 432 TIGRFAM TIGR03467 HpnE: squalene-associated FAD-dependent desaturase 6 425 6.3E-120 T 19-04-2016 IPR017830 Squalene-associated FAD-dependent desaturase APA12_RS03380 3d029794ce07c604a3518d5c67cf9772 282 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 6 70 2.1E-25 T 19-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 APA12_RS03380 3d029794ce07c604a3518d5c67cf9772 282 PANTHER PTHR19136 16 281 1.9E-108 T 19-04-2016 APA12_RS03380 3d029794ce07c604a3518d5c67cf9772 282 PANTHER PTHR19136:SF52 16 281 1.9E-108 T 19-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 APA12_RS03380 3d029794ce07c604a3518d5c67cf9772 282 Gene3D G3DSA:1.10.166.10 4 71 3.9E-28 T 19-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 APA12_RS03380 3d029794ce07c604a3518d5c67cf9772 282 SUPERFAMILY SSF51161 6 264 6.81E-68 T 19-04-2016 IPR011004 Trimeric LpxA-like APA12_RS03380 3d029794ce07c604a3518d5c67cf9772 282 Gene3D G3DSA:2.160.10.10 92 244 4.2E-55 T 19-04-2016 APA12_RS03380 3d029794ce07c604a3518d5c67cf9772 282 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 6 281 2.7E-125 T 19-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 APA12_RS03380 3d029794ce07c604a3518d5c67cf9772 282 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 135 169 1.2E-4 T 19-04-2016 IPR001451 Hexapeptide repeat APA12_RS03380 3d029794ce07c604a3518d5c67cf9772 282 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 3 282 54.939 T 19-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 APA12_RS03380 3d029794ce07c604a3518d5c67cf9772 282 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 178 213 2.5E-12 T 19-04-2016 IPR001451 Hexapeptide repeat APA12_RS07755 02ba43db0d92ebc6ab844444a7f87793 345 PANTHER PTHR19328:SF26 32 341 1.8E-132 T 19-04-2016 APA12_RS07755 02ba43db0d92ebc6ab844444a7f87793 345 PANTHER PTHR19328 32 341 1.8E-132 T 19-04-2016 APA12_RS07755 02ba43db0d92ebc6ab844444a7f87793 345 Gene3D G3DSA:2.120.10.30 33 341 4.7E-52 T 19-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APA12_RS07755 02ba43db0d92ebc6ab844444a7f87793 345 Pfam PF07995 Glucose / Sorbosone dehydrogenase 77 268 5.6E-12 T 19-04-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 APA12_RS07755 02ba43db0d92ebc6ab844444a7f87793 345 SUPERFAMILY SSF50952 32 342 9.29E-34 T 19-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 APA12_RS04140 780d7396c4bb360d254900a5a7e48a10 107 SUPERFAMILY SSF53955 45 105 1.75E-5 T 19-04-2016 IPR023346 Lysozyme-like domain APA12_RS04140 780d7396c4bb360d254900a5a7e48a10 107 Gene3D G3DSA:1.10.530.40 60 105 5.5E-6 T 19-04-2016 IPR023347 Lysozyme domain GO:0003796 APA12_RS08310 8d62f32f30a8480bc10320efe570135d 219 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 44 164 4.2E-44 T 19-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 APA12_RS08310 8d62f32f30a8480bc10320efe570135d 219 PANTHER PTHR10884 40 218 6.5E-81 T 19-04-2016 APA12_RS08310 8d62f32f30a8480bc10320efe570135d 219 SUPERFAMILY SSF143243 31 196 4.97E-55 T 19-04-2016 APA12_RS08310 8d62f32f30a8480bc10320efe570135d 219 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 42 163 1.3E-43 T 19-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 APA12_RS08310 8d62f32f30a8480bc10320efe570135d 219 PANTHER PTHR10884:SF10 40 218 6.5E-81 T 19-04-2016 APA12_RS08310 8d62f32f30a8480bc10320efe570135d 219 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 13 171 31.28 T 19-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 APA12_RS08310 8d62f32f30a8480bc10320efe570135d 219 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 92 150 6.0E-18 T 19-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 APA12_RS08615 df640d5fad9e9f79568423177086a21f 368 PIRSF PIRSF002465 16 352 4.2E-115 T 19-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 APA12_RS08615 df640d5fad9e9f79568423177086a21f 368 PANTHER PTHR30100 16 355 2.4E-125 T 19-04-2016 APA12_RS08615 df640d5fad9e9f79568423177086a21f 368 Pfam PF02504 Fatty acid synthesis protein 20 338 7.5E-101 T 19-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 APA12_RS08615 df640d5fad9e9f79568423177086a21f 368 Gene3D G3DSA:3.40.718.10 18 348 6.3E-122 T 19-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APA12_RS08615 df640d5fad9e9f79568423177086a21f 368 PANTHER PTHR30100:SF1 16 355 2.4E-125 T 19-04-2016 APA12_RS08615 df640d5fad9e9f79568423177086a21f 368 SUPERFAMILY SSF53659 19 348 2.92E-94 T 19-04-2016 APA12_RS08615 df640d5fad9e9f79568423177086a21f 368 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 355 129.972 T 19-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 APA12_RS08615 df640d5fad9e9f79568423177086a21f 368 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 19 348 2.9E-92 T 19-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 APA12_RS07025 858f557b160b0e69cbc749a35a7b2251 330 Gene3D G3DSA:3.40.190.10 116 206 2.5E-14 T 19-04-2016 APA12_RS07025 858f557b160b0e69cbc749a35a7b2251 330 PANTHER PTHR30024 33 288 3.3E-37 T 19-04-2016 APA12_RS07025 858f557b160b0e69cbc749a35a7b2251 330 PANTHER PTHR30024:SF8 33 288 3.3E-37 T 19-04-2016 APA12_RS07025 858f557b160b0e69cbc749a35a7b2251 330 Pfam PF09084 NMT1/THI5 like 46 230 2.9E-11 T 19-04-2016 IPR015168 SsuA/THI5-like APA12_RS07025 858f557b160b0e69cbc749a35a7b2251 330 SUPERFAMILY SSF53850 30 243 1.32E-33 T 19-04-2016 APA12_RS05800 b6b5d4f34204bf53bb9bb32ae41cf4a6 264 SMART SM00849 39 232 1.8E-8 T 19-04-2016 IPR001279 Metallo-beta-lactamase APA12_RS05800 b6b5d4f34204bf53bb9bb32ae41cf4a6 264 Gene3D G3DSA:3.60.15.10 1 261 1.7E-65 T 19-04-2016 IPR001279 Metallo-beta-lactamase APA12_RS05800 b6b5d4f34204bf53bb9bb32ae41cf4a6 264 PANTHER PTHR12553:SF7 1 263 6.3E-46 T 19-04-2016 APA12_RS05800 b6b5d4f34204bf53bb9bb32ae41cf4a6 264 Pfam PF12706 Beta-lactamase superfamily domain 53 233 5.0E-31 T 19-04-2016 IPR001279 Metallo-beta-lactamase APA12_RS05800 b6b5d4f34204bf53bb9bb32ae41cf4a6 264 PANTHER PTHR12553 1 263 6.3E-46 T 19-04-2016 APA12_RS05800 b6b5d4f34204bf53bb9bb32ae41cf4a6 264 SUPERFAMILY SSF56281 1 261 1.97E-49 T 19-04-2016 IPR001279 Metallo-beta-lactamase APA12_RS06460 e8f17acce591ea08cbb232e631021435 376 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 73 177 1.4E-23 T 19-04-2016 IPR026992 Non-haem dioxygenase N-terminal domain APA12_RS06460 e8f17acce591ea08cbb232e631021435 376 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 242 340 1.4E-16 T 19-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 APA12_RS06460 e8f17acce591ea08cbb232e631021435 376 PANTHER PTHR10209 72 376 4.0E-87 T 19-04-2016 APA12_RS06460 e8f17acce591ea08cbb232e631021435 376 Gene3D G3DSA:2.60.120.330 69 374 7.9E-79 T 19-04-2016 IPR027443 Isopenicillin N synthase-like APA12_RS06460 e8f17acce591ea08cbb232e631021435 376 SUPERFAMILY SSF51197 71 371 1.21E-76 T 19-04-2016 APA12_RS06460 e8f17acce591ea08cbb232e631021435 376 PANTHER PTHR10209:SF188 72 376 4.0E-87 T 19-04-2016 APA12_RS12760 4b0da5723166127399c3e5f8ea65ccdc 376 Gene3D G3DSA:3.20.20.10 27 245 3.1E-67 T 19-04-2016 IPR029066 PLP-binding barrel APA12_RS12760 4b0da5723166127399c3e5f8ea65ccdc 376 Gene3D G3DSA:2.40.37.10 246 376 8.7E-18 T 19-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 APA12_RS12760 4b0da5723166127399c3e5f8ea65ccdc 376 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 249 268 1.3E-16 T 19-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APA12_RS12760 4b0da5723166127399c3e5f8ea65ccdc 376 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 166 179 1.3E-16 T 19-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APA12_RS12760 4b0da5723166127399c3e5f8ea65ccdc 376 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 64 76 1.3E-16 T 19-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APA12_RS12760 4b0da5723166127399c3e5f8ea65ccdc 376 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 44 62 1.3E-16 T 19-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APA12_RS12760 4b0da5723166127399c3e5f8ea65ccdc 376 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 272 373 1.0E-9 T 19-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 APA12_RS12760 4b0da5723166127399c3e5f8ea65ccdc 376 PRINTS PR01182 Ornithine decarboxylase signature 42 69 4.8E-19 T 19-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 APA12_RS12760 4b0da5723166127399c3e5f8ea65ccdc 376 PRINTS PR01182 Ornithine decarboxylase signature 86 110 4.8E-19 T 19-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 APA12_RS12760 4b0da5723166127399c3e5f8ea65ccdc 376 PRINTS PR01182 Ornithine decarboxylase signature 16 40 4.8E-19 T 19-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 APA12_RS12760 4b0da5723166127399c3e5f8ea65ccdc 376 PRINTS PR01182 Ornithine decarboxylase signature 318 328 4.8E-19 T 19-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 APA12_RS12760 4b0da5723166127399c3e5f8ea65ccdc 376 PRINTS PR01182 Ornithine decarboxylase signature 116 138 4.8E-19 T 19-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 APA12_RS12760 4b0da5723166127399c3e5f8ea65ccdc 376 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 34 259 8.8E-55 T 19-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 APA12_RS12760 4b0da5723166127399c3e5f8ea65ccdc 376 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 44 62 - T 19-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 APA12_RS12760 4b0da5723166127399c3e5f8ea65ccdc 376 SUPERFAMILY SSF50621 232 376 1.23E-24 T 19-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 APA12_RS12760 4b0da5723166127399c3e5f8ea65ccdc 376 SUPERFAMILY SSF51419 16 261 6.25E-67 T 19-04-2016 IPR029066 PLP-binding barrel APA12_RS12760 4b0da5723166127399c3e5f8ea65ccdc 376 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 201 217 - T 19-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 APA12_RS12760 4b0da5723166127399c3e5f8ea65ccdc 376 PANTHER PTHR11482 4 376 4.3E-107 T 19-04-2016 APA12_RS12760 4b0da5723166127399c3e5f8ea65ccdc 376 PANTHER PTHR11482:SF6 4 376 4.3E-107 T 19-04-2016 APA12_RS01580 6ffcde3ee1b6e5c0cc05dc16456fa3e8 417 Gene3D G3DSA:2.40.30.10 198 290 2.6E-5 T 19-04-2016 APA12_RS01580 6ffcde3ee1b6e5c0cc05dc16456fa3e8 417 SUPERFAMILY SSF160996 201 345 9.16E-15 T 19-04-2016 APA12_RS01580 6ffcde3ee1b6e5c0cc05dc16456fa3e8 417 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 9 399 3.4E-87 T 19-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like APA12_RS01580 6ffcde3ee1b6e5c0cc05dc16456fa3e8 417 PANTHER PTHR10617:SF103 8 302 2.6E-51 T 19-04-2016 APA12_RS01580 6ffcde3ee1b6e5c0cc05dc16456fa3e8 417 PANTHER PTHR10617:SF103 338 407 2.6E-51 T 19-04-2016 APA12_RS01580 6ffcde3ee1b6e5c0cc05dc16456fa3e8 417 Gene3D G3DSA:3.50.50.60 347 400 8.9E-40 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS01580 6ffcde3ee1b6e5c0cc05dc16456fa3e8 417 Gene3D G3DSA:3.50.50.60 8 195 8.9E-40 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS01580 6ffcde3ee1b6e5c0cc05dc16456fa3e8 417 Pfam PF03486 HI0933-like protein 8 399 3.8E-103 T 19-04-2016 APA12_RS01580 6ffcde3ee1b6e5c0cc05dc16456fa3e8 417 PANTHER PTHR10617 8 302 2.6E-51 T 19-04-2016 APA12_RS01580 6ffcde3ee1b6e5c0cc05dc16456fa3e8 417 PANTHER PTHR10617 338 407 2.6E-51 T 19-04-2016 APA12_RS01580 6ffcde3ee1b6e5c0cc05dc16456fa3e8 417 TIGRFAM TIGR03862 flavo_PP4765: flavoprotein, TIGR03862 family 29 406 7.1E-153 T 19-04-2016 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 APA12_RS01580 6ffcde3ee1b6e5c0cc05dc16456fa3e8 417 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 4.5E-5 T 19-04-2016 APA12_RS01580 6ffcde3ee1b6e5c0cc05dc16456fa3e8 417 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 369 376 4.5E-5 T 19-04-2016 APA12_RS01580 6ffcde3ee1b6e5c0cc05dc16456fa3e8 417 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 6.3E-8 T 19-04-2016 APA12_RS01580 6ffcde3ee1b6e5c0cc05dc16456fa3e8 417 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 354 376 6.3E-8 T 19-04-2016 APA12_RS01580 6ffcde3ee1b6e5c0cc05dc16456fa3e8 417 SUPERFAMILY SSF51905 8 197 3.49E-45 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS01580 6ffcde3ee1b6e5c0cc05dc16456fa3e8 417 SUPERFAMILY SSF51905 345 400 3.49E-45 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS12675 cf6e273a091546c6f6dcb9a5d19a41b2 381 SUPERFAMILY SSF50621 246 378 1.22E-40 T 19-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 APA12_RS12675 cf6e273a091546c6f6dcb9a5d19a41b2 381 Pfam PF01168 Alanine racemase, N-terminal domain 26 241 7.8E-58 T 19-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APA12_RS12675 cf6e273a091546c6f6dcb9a5d19a41b2 381 PANTHER PTHR30511:SF0 17 377 3.2E-94 T 19-04-2016 APA12_RS12675 cf6e273a091546c6f6dcb9a5d19a41b2 381 SUPERFAMILY SSF51419 26 252 5.23E-60 T 19-04-2016 IPR029066 PLP-binding barrel APA12_RS12675 cf6e273a091546c6f6dcb9a5d19a41b2 381 PRINTS PR00992 Alanine racemase signature 142 154 1.5E-41 T 19-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APA12_RS12675 cf6e273a091546c6f6dcb9a5d19a41b2 381 PRINTS PR00992 Alanine racemase signature 268 283 1.5E-41 T 19-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APA12_RS12675 cf6e273a091546c6f6dcb9a5d19a41b2 381 PRINTS PR00992 Alanine racemase signature 214 241 1.5E-41 T 19-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APA12_RS12675 cf6e273a091546c6f6dcb9a5d19a41b2 381 PRINTS PR00992 Alanine racemase signature 306 323 1.5E-41 T 19-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APA12_RS12675 cf6e273a091546c6f6dcb9a5d19a41b2 381 PRINTS PR00992 Alanine racemase signature 360 373 1.5E-41 T 19-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APA12_RS12675 cf6e273a091546c6f6dcb9a5d19a41b2 381 PRINTS PR00992 Alanine racemase signature 285 300 1.5E-41 T 19-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APA12_RS12675 cf6e273a091546c6f6dcb9a5d19a41b2 381 PRINTS PR00992 Alanine racemase signature 44 60 1.5E-41 T 19-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APA12_RS12675 cf6e273a091546c6f6dcb9a5d19a41b2 381 PRINTS PR00992 Alanine racemase signature 176 187 1.5E-41 T 19-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APA12_RS12675 cf6e273a091546c6f6dcb9a5d19a41b2 381 SMART SM01005 252 378 6.3E-49 T 19-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APA12_RS12675 cf6e273a091546c6f6dcb9a5d19a41b2 381 Pfam PF00842 Alanine racemase, C-terminal domain 252 377 2.2E-33 T 19-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APA12_RS12675 cf6e273a091546c6f6dcb9a5d19a41b2 381 TIGRFAM TIGR00492 alr: alanine racemase 22 377 3.7E-78 T 19-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APA12_RS12675 cf6e273a091546c6f6dcb9a5d19a41b2 381 Gene3D G3DSA:3.20.20.10 28 233 9.2E-62 T 19-04-2016 IPR029066 PLP-binding barrel APA12_RS12675 cf6e273a091546c6f6dcb9a5d19a41b2 381 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 49 59 - T 19-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APA12_RS12675 cf6e273a091546c6f6dcb9a5d19a41b2 381 PANTHER PTHR30511 17 377 3.2E-94 T 19-04-2016 APA12_RS12675 cf6e273a091546c6f6dcb9a5d19a41b2 381 Hamap MF_01201 Alanine racemase. 19 378 29.046 T 19-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APA12_RS12675 cf6e273a091546c6f6dcb9a5d19a41b2 381 Gene3D G3DSA:2.40.37.10 234 378 2.0E-46 T 19-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 APA12_RS02835 37991e84009d4a454a02d4fd50cecfc5 818 Pfam PF00593 TonB dependent receptor 548 812 9.6E-22 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS02835 37991e84009d4a454a02d4fd50cecfc5 818 SUPERFAMILY SSF56935 111 679 1.34E-86 T 19-04-2016 APA12_RS02835 37991e84009d4a454a02d4fd50cecfc5 818 SUPERFAMILY SSF56935 712 818 1.34E-86 T 19-04-2016 APA12_RS02835 37991e84009d4a454a02d4fd50cecfc5 818 PANTHER PTHR32552 55 683 2.0E-26 T 19-04-2016 APA12_RS02835 37991e84009d4a454a02d4fd50cecfc5 818 PANTHER PTHR32552 709 818 2.0E-26 T 19-04-2016 APA12_RS02835 37991e84009d4a454a02d4fd50cecfc5 818 Gene3D G3DSA:2.170.130.10 105 243 3.2E-12 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS02835 37991e84009d4a454a02d4fd50cecfc5 818 Gene3D G3DSA:2.40.170.20 244 815 6.5E-70 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS15385 6ed3230ca41b16ab982a8f53852da701 113 Pfam PF02653 Branched-chain amino acid transport system / permease component 1 98 4.4E-16 T 19-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APA12_RS15385 6ed3230ca41b16ab982a8f53852da701 113 PANTHER PTHR11795 1 111 4.5E-39 T 19-04-2016 APA12_RS15385 6ed3230ca41b16ab982a8f53852da701 113 PANTHER PTHR11795:SF349 1 111 4.5E-39 T 19-04-2016 APA12_RS01955 6ce0cdc05338270938c152b78c95939d 184 PANTHER PTHR11241:SF1 1 184 3.2E-72 T 19-04-2016 APA12_RS01955 6ce0cdc05338270938c152b78c95939d 184 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 6 184 6.3E-49 T 19-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 APA12_RS01955 6ce0cdc05338270938c152b78c95939d 184 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 184 28.758 T 19-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 APA12_RS01955 6ce0cdc05338270938c152b78c95939d 184 PANTHER PTHR11241 1 184 3.2E-72 T 19-04-2016 APA12_RS01955 6ce0cdc05338270938c152b78c95939d 184 Pfam PF00692 dUTPase 77 179 3.5E-7 T 19-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 APA12_RS01955 6ce0cdc05338270938c152b78c95939d 184 Gene3D G3DSA:2.70.40.10 3 183 1.1E-64 T 19-04-2016 IPR029054 dUTPase-like APA12_RS01955 6ce0cdc05338270938c152b78c95939d 184 SUPERFAMILY SSF51283 3 183 1.44E-50 T 19-04-2016 IPR029054 dUTPase-like APA12_RS05110 1213b1bf700f8ffbc63e1694a4db536e 534 SMART SM00028 147 180 0.05 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APA12_RS05110 1213b1bf700f8ffbc63e1694a4db536e 534 SMART SM00028 181 214 1.4E-5 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APA12_RS05110 1213b1bf700f8ffbc63e1694a4db536e 534 SMART SM00028 113 146 0.0021 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APA12_RS05110 1213b1bf700f8ffbc63e1694a4db536e 534 Pfam PF13432 Tetratricopeptide repeat 91 145 0.0013 T 19-04-2016 APA12_RS05110 1213b1bf700f8ffbc63e1694a4db536e 534 SUPERFAMILY SSF53756 268 526 4.39E-16 T 19-04-2016 APA12_RS05110 1213b1bf700f8ffbc63e1694a4db536e 534 Gene3D G3DSA:3.40.50.2000 447 512 1.3E-8 T 19-04-2016 APA12_RS05110 1213b1bf700f8ffbc63e1694a4db536e 534 Pfam PF13424 Tetratricopeptide repeat 149 211 1.7E-10 T 19-04-2016 APA12_RS05110 1213b1bf700f8ffbc63e1694a4db536e 534 Gene3D G3DSA:1.25.40.10 50 238 8.8E-39 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS05110 1213b1bf700f8ffbc63e1694a4db536e 534 PANTHER PTHR23083 43 233 3.3E-31 T 19-04-2016 APA12_RS05110 1213b1bf700f8ffbc63e1694a4db536e 534 SUPERFAMILY SSF48452 89 244 7.86E-31 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS10765 d4403ae9ce533d6713ad0f3fe438e02c 386 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 1 380 36.07 T 19-04-2016 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 APA12_RS10765 d4403ae9ce533d6713ad0f3fe438e02c 386 SMART SM00471 57 205 1.6E-11 T 19-04-2016 IPR003607 HD/PDEase domain APA12_RS10765 d4403ae9ce533d6713ad0f3fe438e02c 386 Pfam PF13286 Phosphohydrolase-associated domain 288 378 2.8E-28 T 19-04-2016 IPR026875 Phosphohydrolase-associated domain APA12_RS10765 d4403ae9ce533d6713ad0f3fe438e02c 386 Pfam PF01966 HD domain 61 194 8.3E-16 T 19-04-2016 IPR006674 HD domain APA12_RS10765 d4403ae9ce533d6713ad0f3fe438e02c 386 Gene3D G3DSA:1.10.3210.10 281 381 1.5E-77 T 19-04-2016 IPR006674 HD domain APA12_RS10765 d4403ae9ce533d6713ad0f3fe438e02c 386 Gene3D G3DSA:1.10.3210.10 23 204 1.5E-77 T 19-04-2016 IPR006674 HD domain APA12_RS10765 d4403ae9ce533d6713ad0f3fe438e02c 386 Gene3D G3DSA:1.10.3410.10 205 258 8.8E-5 T 19-04-2016 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain APA12_RS10765 d4403ae9ce533d6713ad0f3fe438e02c 386 PANTHER PTHR11373:SF25 2 163 3.5E-75 T 19-04-2016 APA12_RS10765 d4403ae9ce533d6713ad0f3fe438e02c 386 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 23 380 1.8E-95 T 19-04-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 APA12_RS10765 d4403ae9ce533d6713ad0f3fe438e02c 386 SUPERFAMILY SSF109604 14 380 1.5E-85 T 19-04-2016 APA12_RS10765 d4403ae9ce533d6713ad0f3fe438e02c 386 PANTHER PTHR11373 2 163 3.5E-75 T 19-04-2016 APA12_RS03255 dfb2724525fbcc8127476f9e56357ea7 123 SUPERFAMILY SSF63562 1 72 3.92E-20 T 19-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APA12_RS03255 dfb2724525fbcc8127476f9e56357ea7 123 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 61 16.368 T 19-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APA12_RS03255 dfb2724525fbcc8127476f9e56357ea7 123 Gene3D G3DSA:3.90.940.10 1 66 7.7E-13 T 19-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APA12_RS03255 dfb2724525fbcc8127476f9e56357ea7 123 Pfam PF01192 RNA polymerase Rpb6 8 58 7.0E-14 T 19-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APA12_RS03255 dfb2724525fbcc8127476f9e56357ea7 123 PANTHER PTHR34476 2 90 1.5E-18 T 19-04-2016 APA12_RS03255 dfb2724525fbcc8127476f9e56357ea7 123 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 58 1.8E-19 T 19-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APA12_RS03255 dfb2724525fbcc8127476f9e56357ea7 123 SMART SM01409 8 60 4.9E-14 T 19-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APA12_RS12160 3474000a34f8a883a4517a12f90e3df2 126 Pfam PF01381 Helix-turn-helix 64 115 3.0E-5 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APA12_RS12160 3474000a34f8a883a4517a12f90e3df2 126 PANTHER PTHR40455 8 124 6.6E-19 T 19-04-2016 APA12_RS12160 3474000a34f8a883a4517a12f90e3df2 126 PANTHER PTHR40455:SF1 8 124 6.6E-19 T 19-04-2016 APA12_RS12160 3474000a34f8a883a4517a12f90e3df2 126 Gene3D G3DSA:1.10.260.40 44 118 4.0E-13 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APA12_RS12160 3474000a34f8a883a4517a12f90e3df2 126 SMART SM00530 62 116 1.1E-4 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APA12_RS12160 3474000a34f8a883a4517a12f90e3df2 126 SUPERFAMILY SSF47413 56 117 2.47E-6 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APA12_RS03080 a98ab4826d9478b0172ee640b32e692d 656 PANTHER PTHR31645 401 609 6.2E-115 T 19-04-2016 APA12_RS03080 a98ab4826d9478b0172ee640b32e692d 656 PANTHER PTHR31645 5 384 6.2E-115 T 19-04-2016 APA12_RS03080 a98ab4826d9478b0172ee640b32e692d 656 TIGRFAM TIGR00733 TIGR00733: oligopeptide transporter, OPT family 9 608 4.4E-189 T 19-04-2016 IPR004814 Oligopeptide transporter OPT APA12_RS03080 a98ab4826d9478b0172ee640b32e692d 656 TIGRFAM TIGR00728 OPT_sfam: oligopeptide transporter, OPT superfamily 2 605 1.1E-95 T 19-04-2016 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 APA12_RS03080 a98ab4826d9478b0172ee640b32e692d 656 PANTHER PTHR31645:SF0 401 609 6.2E-115 T 19-04-2016 APA12_RS03080 a98ab4826d9478b0172ee640b32e692d 656 PANTHER PTHR31645:SF0 5 384 6.2E-115 T 19-04-2016 APA12_RS03080 a98ab4826d9478b0172ee640b32e692d 656 Pfam PF03169 OPT oligopeptide transporter protein 9 608 9.6E-98 T 19-04-2016 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 APA12_RS12380 0ece20d54deef38b5f3114c2493686a2 305 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 9 305 17.593 T 19-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 APA12_RS12380 0ece20d54deef38b5f3114c2493686a2 305 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 31 179 9.5E-46 T 19-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 APA12_RS12380 0ece20d54deef38b5f3114c2493686a2 305 Gene3D G3DSA:2.30.130.10 241 304 6.4E-6 T 19-04-2016 IPR015947 PUA-like domain APA12_RS12380 0ece20d54deef38b5f3114c2493686a2 305 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 216 2.5E-59 T 19-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 APA12_RS12380 0ece20d54deef38b5f3114c2493686a2 305 PANTHER PTHR13767 1 305 1.0E-102 T 19-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 APA12_RS12380 0ece20d54deef38b5f3114c2493686a2 305 PANTHER PTHR13767:SF2 1 305 1.0E-102 T 19-04-2016 APA12_RS12380 0ece20d54deef38b5f3114c2493686a2 305 SUPERFAMILY SSF55120 8 220 1.15E-69 T 19-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APA12_RS12380 0ece20d54deef38b5f3114c2493686a2 305 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 239 3.5E-9 T 19-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal APA12_RS12380 0ece20d54deef38b5f3114c2493686a2 305 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 243 304 5.9E-8 T 19-04-2016 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 APA12_RS04360 7cd77173cd19d63f43c7415c9295c1d5 253 PANTHER PTHR15462 44 229 1.2E-12 T 19-04-2016 APA12_RS04360 7cd77173cd19d63f43c7415c9295c1d5 253 Pfam PF00089 Trypsin 51 235 1.3E-9 T 19-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 APA12_RS04360 7cd77173cd19d63f43c7415c9295c1d5 253 Gene3D G3DSA:2.40.10.10 162 243 1.7E-6 T 19-04-2016 APA12_RS04360 7cd77173cd19d63f43c7415c9295c1d5 253 PANTHER PTHR15462:SF8 44 229 1.2E-12 T 19-04-2016 APA12_RS04360 7cd77173cd19d63f43c7415c9295c1d5 253 Gene3D G3DSA:2.40.10.10 55 161 4.6E-12 T 19-04-2016 APA12_RS04360 7cd77173cd19d63f43c7415c9295c1d5 253 SUPERFAMILY SSF50494 44 241 1.04E-21 T 19-04-2016 IPR009003 Peptidase S1, PA clan APA12_RS09110 528f7b0f6260b815a96abef3478e2b3c 527 Gene3D G3DSA:3.90.1200.10 362 443 1.7E-5 T 19-04-2016 APA12_RS09110 528f7b0f6260b815a96abef3478e2b3c 527 SUPERFAMILY SSF53448 28 227 7.79E-6 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS09110 528f7b0f6260b815a96abef3478e2b3c 527 SUPERFAMILY SSF56112 237 439 5.04E-8 T 19-04-2016 IPR011009 Protein kinase-like domain APA12_RS10525 da5ec56539e6a3e63f80d3c9bb959ebb 233 PANTHER PTHR34698:SF1 16 232 1.0E-95 T 19-04-2016 APA12_RS10525 da5ec56539e6a3e63f80d3c9bb959ebb 233 PANTHER PTHR34698 16 232 1.0E-95 T 19-04-2016 APA12_RS10525 da5ec56539e6a3e63f80d3c9bb959ebb 233 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 25 226 1.3E-49 T 19-04-2016 IPR010016 KipI family APA12_RS10525 da5ec56539e6a3e63f80d3c9bb959ebb 233 SUPERFAMILY SSF160467 21 106 4.32E-9 T 19-04-2016 APA12_RS10525 da5ec56539e6a3e63f80d3c9bb959ebb 233 Gene3D G3DSA:3.30.1360.40 21 97 6.0E-9 T 19-04-2016 IPR024946 Arginine repressor C-terminal-like domain APA12_RS10525 da5ec56539e6a3e63f80d3c9bb959ebb 233 Gene3D G3DSA:2.40.100.10 104 228 1.5E-39 T 19-04-2016 IPR029000 Cyclophilin-like domain APA12_RS10525 da5ec56539e6a3e63f80d3c9bb959ebb 233 SMART SM00796 20 218 2.2E-81 T 19-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D APA12_RS10525 da5ec56539e6a3e63f80d3c9bb959ebb 233 SUPERFAMILY SSF50891 105 231 3.79E-37 T 19-04-2016 IPR029000 Cyclophilin-like domain APA12_RS10525 da5ec56539e6a3e63f80d3c9bb959ebb 233 Pfam PF02682 Allophanate hydrolase subunit 1 21 217 2.6E-56 T 19-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D APA12_RS01730 4fb483aa8302efa1663c1b2abe46ef58 418 Pfam PF08757 CotH protein 35 409 2.5E-23 T 19-04-2016 IPR014867 Spore coat protein CotH APA12_RS02135 578e2e12a22ba2573117f18abadf988b 303 SUPERFAMILY SSF53807 27 268 1.77E-30 T 19-04-2016 APA12_RS02135 578e2e12a22ba2573117f18abadf988b 303 Gene3D G3DSA:3.40.50.1980 28 128 7.1E-7 T 19-04-2016 APA12_RS02135 578e2e12a22ba2573117f18abadf988b 303 Pfam PF01497 Periplasmic binding protein 32 242 7.7E-20 T 19-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 APA12_RS02135 578e2e12a22ba2573117f18abadf988b 303 Gene3D G3DSA:3.40.50.1980 129 271 3.4E-16 T 19-04-2016 APA12_RS13130 b833210b50bcefc094e40ccb94618b41 303 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 12 296 1.8E-135 T 19-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 APA12_RS13130 b833210b50bcefc094e40ccb94618b41 303 SUPERFAMILY SSF53448 11 295 1.96E-82 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS13130 b833210b50bcefc094e40ccb94618b41 303 Gene3D G3DSA:3.90.550.10 10 271 4.1E-64 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS13130 b833210b50bcefc094e40ccb94618b41 303 PANTHER PTHR22572 12 278 2.4E-150 T 19-04-2016 APA12_RS13130 b833210b50bcefc094e40ccb94618b41 303 PANTHER PTHR22572:SF105 12 278 2.4E-150 T 19-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 APA12_RS13130 b833210b50bcefc094e40ccb94618b41 303 Pfam PF00483 Nucleotidyl transferase 12 248 9.2E-64 T 19-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 APA12_RS10425 1aab292f7b87b120e5e0001ca06513a6 285 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 27 114 2.0E-24 T 19-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 APA12_RS10425 1aab292f7b87b120e5e0001ca06513a6 285 PIRSF PIRSF006250 9 285 2.6E-91 T 19-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD APA12_RS10425 1aab292f7b87b120e5e0001ca06513a6 285 SUPERFAMILY SSF54675 5 115 1.61E-29 T 19-04-2016 APA12_RS10425 1aab292f7b87b120e5e0001ca06513a6 285 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 16 283 4.4E-93 T 19-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 APA12_RS10425 1aab292f7b87b120e5e0001ca06513a6 285 SUPERFAMILY SSF51690 116 283 1.18E-55 T 19-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 APA12_RS10425 1aab292f7b87b120e5e0001ca06513a6 285 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 116 283 5.7E-58 T 19-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 APA12_RS10425 1aab292f7b87b120e5e0001ca06513a6 285 Gene3D G3DSA:3.90.1170.20 5 136 2.0E-44 T 19-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 APA12_RS10425 1aab292f7b87b120e5e0001ca06513a6 285 PANTHER PTHR32179 6 283 9.2E-108 T 19-04-2016 APA12_RS10425 1aab292f7b87b120e5e0001ca06513a6 285 Gene3D G3DSA:3.20.20.70 137 274 4.1E-54 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS12625 b2b9e65e660f958167b51236fe4127bb 403 PANTHER PTHR38592 7 401 8.1E-55 T 19-04-2016 APA12_RS12625 b2b9e65e660f958167b51236fe4127bb 403 Pfam PF10129 OpgC protein 42 391 7.7E-89 T 19-04-2016 IPR014550 Uncharacterised conserved protein UCP028704, OpgC APA12_RS12625 b2b9e65e660f958167b51236fe4127bb 403 PIRSF PIRSF028704 12 403 1.3E-80 T 19-04-2016 IPR014550 Uncharacterised conserved protein UCP028704, OpgC APA12_RS14670 20e5d9e262674b43e6dea38d5eb66808 324 PANTHER PTHR10160:SF24 22 324 2.0E-119 T 19-04-2016 APA12_RS14670 20e5d9e262674b43e6dea38d5eb66808 324 Pfam PF02233 NAD(P) transhydrogenase beta subunit 16 323 5.9E-107 T 19-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 APA12_RS14670 20e5d9e262674b43e6dea38d5eb66808 324 Gene3D G3DSA:3.40.50.1220 244 323 2.7E-34 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APA12_RS14670 20e5d9e262674b43e6dea38d5eb66808 324 SUPERFAMILY SSF52467 245 323 1.39E-28 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APA12_RS14670 20e5d9e262674b43e6dea38d5eb66808 324 PANTHER PTHR10160 22 324 2.0E-119 T 19-04-2016 APA12_RS05960 475a557668daf5cd3bbfb1f07dc5b14a 197 PANTHER PTHR30461 4 188 5.3E-42 T 19-04-2016 APA12_RS05960 475a557668daf5cd3bbfb1f07dc5b14a 197 Pfam PF00239 Resolvase, N terminal domain 6 141 2.5E-41 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APA12_RS05960 475a557668daf5cd3bbfb1f07dc5b14a 197 SUPERFAMILY SSF46689 144 186 2.87E-6 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS05960 475a557668daf5cd3bbfb1f07dc5b14a 197 Pfam PF02796 Helix-turn-helix domain of resolvase 144 186 1.3E-10 T 19-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 APA12_RS05960 475a557668daf5cd3bbfb1f07dc5b14a 197 Gene3D G3DSA:3.40.50.1390 6 126 2.5E-36 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APA12_RS05960 475a557668daf5cd3bbfb1f07dc5b14a 197 ProSitePatterns PS00398 Site-specific recombinases signature 2. 61 73 - T 19-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 APA12_RS05960 475a557668daf5cd3bbfb1f07dc5b14a 197 SUPERFAMILY SSF53041 5 141 8.37E-41 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APA12_RS05960 475a557668daf5cd3bbfb1f07dc5b14a 197 Gene3D G3DSA:1.10.10.60 144 186 3.2E-11 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS05960 475a557668daf5cd3bbfb1f07dc5b14a 197 SMART SM00857 5 142 5.6E-51 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APA12_RS05600 c8e9f0044df1424e2ae53840d260b2cd 481 PANTHER PTHR11999:SF70 4 460 1.9E-123 T 19-04-2016 APA12_RS05600 c8e9f0044df1424e2ae53840d260b2cd 481 Gene3D G3DSA:3.40.640.10 90 362 9.4E-86 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APA12_RS05600 c8e9f0044df1424e2ae53840d260b2cd 481 SUPERFAMILY SSF53383 8 472 2.07E-118 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APA12_RS05600 c8e9f0044df1424e2ae53840d260b2cd 481 PANTHER PTHR11999 4 460 1.9E-123 T 19-04-2016 APA12_RS05600 c8e9f0044df1424e2ae53840d260b2cd 481 Gene3D G3DSA:1.20.1340.10 8 86 1.5E-9 T 19-04-2016 APA12_RS05600 c8e9f0044df1424e2ae53840d260b2cd 481 Gene3D G3DSA:3.90.1150.10 363 470 2.2E-36 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APA12_RS05600 c8e9f0044df1424e2ae53840d260b2cd 481 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 48 409 5.6E-66 T 19-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 APA12_RS05600 c8e9f0044df1424e2ae53840d260b2cd 481 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 391 410 6.9E-15 T 19-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 APA12_RS05600 c8e9f0044df1424e2ae53840d260b2cd 481 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 79 98 6.9E-15 T 19-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 APA12_RS05600 c8e9f0044df1424e2ae53840d260b2cd 481 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 117 136 6.9E-15 T 19-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 APA12_RS05600 c8e9f0044df1424e2ae53840d260b2cd 481 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 12 31 6.9E-15 T 19-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 APA12_RS05600 c8e9f0044df1424e2ae53840d260b2cd 481 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 348 363 6.9E-15 T 19-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 APA12_RS05600 c8e9f0044df1424e2ae53840d260b2cd 481 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 53 72 6.9E-15 T 19-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 APA12_RS08455 905b173daccfe4c7c8f14137463ea15a 101 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 2.6E-25 T 19-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS08455 905b173daccfe4c7c8f14137463ea15a 101 PANTHER PTHR13528 1 96 7.1E-37 T 19-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 APA12_RS08455 905b173daccfe4c7c8f14137463ea15a 101 Gene3D G3DSA:2.30.170.40 2 76 4.4E-31 T 19-04-2016 APA12_RS08455 905b173daccfe4c7c8f14137463ea15a 101 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 68 21.613 T 19-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS08455 905b173daccfe4c7c8f14137463ea15a 101 Pfam PF00830 Ribosomal L28 family 3 61 4.0E-25 T 19-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 APA12_RS08455 905b173daccfe4c7c8f14137463ea15a 101 SUPERFAMILY SSF143800 1 77 1.04E-27 T 19-04-2016 APA12_RS09810 e27fe56404262584071dd64b5cf68b65 400 Pfam PF00271 Helicase conserved C-terminal domain 237 345 3.0E-27 T 19-04-2016 IPR001650 Helicase, C-terminal APA12_RS09810 e27fe56404262584071dd64b5cf68b65 400 PANTHER PTHR24031 4 366 5.1E-127 T 19-04-2016 APA12_RS09810 e27fe56404262584071dd64b5cf68b65 400 SUPERFAMILY SSF52540 34 357 2.3E-63 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS09810 e27fe56404262584071dd64b5cf68b65 400 Pfam PF00270 DEAD/DEAH box helicase 27 200 8.3E-40 T 19-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APA12_RS09810 e27fe56404262584071dd64b5cf68b65 400 SMART SM00487 22 226 6.0E-51 T 19-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APA12_RS09810 e27fe56404262584071dd64b5cf68b65 400 Gene3D G3DSA:3.40.50.300 213 371 8.3E-47 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS09810 e27fe56404262584071dd64b5cf68b65 400 Gene3D G3DSA:3.40.50.300 4 212 2.0E-63 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS09810 e27fe56404262584071dd64b5cf68b65 400 SMART SM00490 264 345 2.3E-30 T 19-04-2016 IPR001650 Helicase, C-terminal APA12_RS09075 5fd6819248b2ef7b4050dca645861e10 359 PANTHER PTHR35604 186 195 2.5E-20 T 19-04-2016 APA12_RS09075 5fd6819248b2ef7b4050dca645861e10 359 PANTHER PTHR35604 45 164 2.5E-20 T 19-04-2016 APA12_RS09075 5fd6819248b2ef7b4050dca645861e10 359 PANTHER PTHR35604 212 358 2.5E-20 T 19-04-2016 APA12_RS09075 5fd6819248b2ef7b4050dca645861e10 359 Pfam PF01609 Transposase DDE domain 138 346 5.0E-12 T 19-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 APA12_RS09075 5fd6819248b2ef7b4050dca645861e10 359 Pfam PF05598 Transposase domain (DUF772) 52 125 6.7E-25 T 19-04-2016 IPR008490 Transposase InsH, N-terminal APA12_RS11465 17c1f63e9e426e3f8be36de56aa82c24 167 PANTHER PTHR30466:SF2 9 159 1.8E-57 T 19-04-2016 APA12_RS11465 17c1f63e9e426e3f8be36de56aa82c24 167 Pfam PF01613 Flavin reductase like domain 13 159 4.7E-32 T 19-04-2016 IPR002563 Flavin reductase like domain GO:0010181 APA12_RS11465 17c1f63e9e426e3f8be36de56aa82c24 167 SMART SM00903 13 158 3.6E-50 T 19-04-2016 IPR002563 Flavin reductase like domain GO:0010181 APA12_RS11465 17c1f63e9e426e3f8be36de56aa82c24 167 Gene3D G3DSA:2.30.110.10 9 163 1.1E-51 T 19-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APA12_RS11465 17c1f63e9e426e3f8be36de56aa82c24 167 PANTHER PTHR30466 9 159 1.8E-57 T 19-04-2016 APA12_RS11465 17c1f63e9e426e3f8be36de56aa82c24 167 SUPERFAMILY SSF50475 9 160 1.47E-44 T 19-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APA12_RS03410 5484634e282b27712f2af4b3556de3b8 169 Pfam PF00011 Hsp20/alpha crystallin family 42 133 1.6E-14 T 19-04-2016 IPR002068 Alpha crystallin/Hsp20 domain APA12_RS03410 5484634e282b27712f2af4b3556de3b8 169 PANTHER PTHR11527:SF127 12 141 2.8E-29 T 19-04-2016 APA12_RS03410 5484634e282b27712f2af4b3556de3b8 169 PANTHER PTHR11527 12 141 2.8E-29 T 19-04-2016 IPR031107 Small heat shock protein HSP20 APA12_RS03410 5484634e282b27712f2af4b3556de3b8 169 Gene3D G3DSA:2.60.40.790 18 133 1.5E-10 T 19-04-2016 IPR008978 HSP20-like chaperone APA12_RS03410 5484634e282b27712f2af4b3556de3b8 169 SUPERFAMILY SSF49764 29 133 6.28E-18 T 19-04-2016 IPR008978 HSP20-like chaperone APA12_RS01965 8b4390ce97650b0614067827fefbca3f 601 Pfam PF04966 Carbohydrate-selective porin, OprB family 233 597 1.4E-59 T 19-04-2016 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 APA12_RS01965 8b4390ce97650b0614067827fefbca3f 601 PANTHER PTHR37944 188 601 6.0E-32 T 19-04-2016 APA12_RS09730 b7c85d7355c74b2966f8b45a8f4587ec 399 Gene3D G3DSA:3.90.1170.20 49 135 2.9E-5 T 19-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 APA12_RS09730 b7c85d7355c74b2966f8b45a8f4587ec 399 SUPERFAMILY SSF51690 124 267 2.65E-33 T 19-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 APA12_RS09730 b7c85d7355c74b2966f8b45a8f4587ec 399 SUPERFAMILY SSF51690 304 387 2.65E-33 T 19-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 APA12_RS09730 b7c85d7355c74b2966f8b45a8f4587ec 399 SUPERFAMILY SSF54675 19 121 1.83E-7 T 19-04-2016 APA12_RS09730 b7c85d7355c74b2966f8b45a8f4587ec 399 Gene3D G3DSA:3.20.20.70 136 267 8.9E-35 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS09730 b7c85d7355c74b2966f8b45a8f4587ec 399 Gene3D G3DSA:3.20.20.70 304 357 8.9E-35 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS08295 70bd0cb6260c6ae7b21aabebea3ff677 442 Pfam PF10531 SLBB domain 245 293 4.9E-7 T 19-04-2016 IPR019554 Soluble ligand binding domain APA12_RS08295 70bd0cb6260c6ae7b21aabebea3ff677 442 SUPERFAMILY SSF140490 327 422 7.72E-37 T 19-04-2016 APA12_RS08295 70bd0cb6260c6ae7b21aabebea3ff677 442 SUPERFAMILY SSF142984 241 326 9.55E-23 T 19-04-2016 APA12_RS08295 70bd0cb6260c6ae7b21aabebea3ff677 442 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 8 417 9.7E-193 T 19-04-2016 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 APA12_RS08295 70bd0cb6260c6ae7b21aabebea3ff677 442 SUPERFAMILY SSF142019 3 240 1.31E-83 T 19-04-2016 APA12_RS08295 70bd0cb6260c6ae7b21aabebea3ff677 442 PANTHER PTHR11780 2 421 2.1E-267 T 19-04-2016 APA12_RS08295 70bd0cb6260c6ae7b21aabebea3ff677 442 SMART SM00928 331 376 4.4E-24 T 19-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 APA12_RS08295 70bd0cb6260c6ae7b21aabebea3ff677 442 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 47 216 1.1E-49 T 19-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain APA12_RS08295 70bd0cb6260c6ae7b21aabebea3ff677 442 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 344 355 - T 19-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 APA12_RS08295 70bd0cb6260c6ae7b21aabebea3ff677 442 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 333 415 8.8E-31 T 19-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 APA12_RS08295 70bd0cb6260c6ae7b21aabebea3ff677 442 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 167 182 - T 19-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 APA12_RS08020 d77eb7d951cc5f98ed7ff6df9f7f170c 321 Pfam PF16220 Domain of unknown function (DUF4880) 9 49 7.3E-11 T 19-04-2016 IPR032623 FecR, N-terminal APA12_RS08020 d77eb7d951cc5f98ed7ff6df9f7f170c 321 PIRSF PIRSF018266 2 319 4.2E-62 T 19-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component APA12_RS08020 d77eb7d951cc5f98ed7ff6df9f7f170c 321 PANTHER PTHR30273 1 321 5.1E-40 T 19-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component APA12_RS08020 d77eb7d951cc5f98ed7ff6df9f7f170c 321 Pfam PF04773 FecR protein 120 206 4.5E-19 T 19-04-2016 IPR006860 FecR protein APA12_RS11325 7b2bd34f1e6c0b059b841464a5711bc9 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 9.2E-14 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS11325 7b2bd34f1e6c0b059b841464a5711bc9 304 Gene3D G3DSA:3.40.190.10 92 175 1.2E-14 T 19-04-2016 APA12_RS11325 7b2bd34f1e6c0b059b841464a5711bc9 304 Gene3D G3DSA:3.40.190.10 176 263 6.4E-14 T 19-04-2016 APA12_RS11325 7b2bd34f1e6c0b059b841464a5711bc9 304 PANTHER PTHR30126:SF34 3 303 5.5E-63 T 19-04-2016 APA12_RS11325 7b2bd34f1e6c0b059b841464a5711bc9 304 PANTHER PTHR30126 3 303 5.5E-63 T 19-04-2016 APA12_RS11325 7b2bd34f1e6c0b059b841464a5711bc9 304 Gene3D G3DSA:1.10.10.10 8 89 1.8E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS11325 7b2bd34f1e6c0b059b841464a5711bc9 304 SUPERFAMILY SSF46785 6 111 6.8E-17 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS11325 7b2bd34f1e6c0b059b841464a5711bc9 304 Pfam PF03466 LysR substrate binding domain 91 295 1.9E-36 T 19-04-2016 IPR005119 LysR, substrate-binding APA12_RS11325 7b2bd34f1e6c0b059b841464a5711bc9 304 SUPERFAMILY SSF53850 92 297 4.5E-31 T 19-04-2016 APA12_RS11045 22b74b5d1cacd18915cc9c24e43f69b2 164 SUPERFAMILY SSF54611 12 161 2.03E-26 T 19-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APA12_RS11045 22b74b5d1cacd18915cc9c24e43f69b2 164 Pfam PF02556 Preprotein translocase subunit SecB 18 161 3.1E-31 T 19-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APA12_RS11045 22b74b5d1cacd18915cc9c24e43f69b2 164 Gene3D G3DSA:3.10.420.10 14 162 4.1E-36 T 19-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APA12_RS07770 d8a21f6de0733820dd621c4558f695c4 379 PIRSF PIRSF000267 2 379 1.2E-98 T 19-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 APA12_RS07770 d8a21f6de0733820dd621c4558f695c4 379 PANTHER PTHR30365:SF6 1 379 1.3E-118 T 19-04-2016 APA12_RS07770 d8a21f6de0733820dd621c4558f695c4 379 PANTHER PTHR30365 1 379 1.3E-118 T 19-04-2016 APA12_RS07770 d8a21f6de0733820dd621c4558f695c4 379 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 4 378 7.8E-111 T 19-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 APA12_RS07770 d8a21f6de0733820dd621c4558f695c4 379 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 363 5.1E-91 T 19-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 APA12_RS00315 8a02cb4b13b7609da5ca3eb0fa14d80d 199 PANTHER PTHR11067 5 194 1.1E-72 T 19-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 APA12_RS00315 8a02cb4b13b7609da5ca3eb0fa14d80d 199 Pfam PF01725 Ham1 family 12 194 4.2E-54 T 19-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 APA12_RS00315 8a02cb4b13b7609da5ca3eb0fa14d80d 199 Gene3D G3DSA:3.90.950.10 8 196 5.6E-78 T 19-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like APA12_RS00315 8a02cb4b13b7609da5ca3eb0fa14d80d 199 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 11 196 5.6E-55 T 19-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 APA12_RS00315 8a02cb4b13b7609da5ca3eb0fa14d80d 199 PANTHER PTHR11067:SF9 5 194 1.1E-72 T 19-04-2016 APA12_RS00315 8a02cb4b13b7609da5ca3eb0fa14d80d 199 SUPERFAMILY SSF52972 10 197 3.14E-67 T 19-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like APA12_RS00315 8a02cb4b13b7609da5ca3eb0fa14d80d 199 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 10 199 46.366 T 19-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 APA12_RS13490 dce672e1f24490712719672d004cf1c0 265 Gene3D G3DSA:3.40.50.300 12 261 2.1E-69 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS13490 dce672e1f24490712719672d004cf1c0 265 PANTHER PTHR13696 5 261 1.6E-85 T 19-04-2016 APA12_RS13490 dce672e1f24490712719672d004cf1c0 265 Pfam PF13614 AAA domain 12 187 3.0E-57 T 19-04-2016 IPR025669 AAA domain APA12_RS13490 dce672e1f24490712719672d004cf1c0 265 PANTHER PTHR13696:SF52 5 261 1.6E-85 T 19-04-2016 APA12_RS13490 dce672e1f24490712719672d004cf1c0 265 SUPERFAMILY SSF52540 12 261 1.05E-64 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS09650 511314e63ba5bf8e2f20226c22888c8c 314 Gene3D G3DSA:3.90.78.10 230 310 1.6E-27 T 19-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APA12_RS09650 511314e63ba5bf8e2f20226c22888c8c 314 PANTHER PTHR21071 5 314 5.3E-105 T 19-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APA12_RS09650 511314e63ba5bf8e2f20226c22888c8c 314 Gene3D G3DSA:3.30.43.10 20 90 1.8E-14 T 19-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 APA12_RS09650 511314e63ba5bf8e2f20226c22888c8c 314 PANTHER PTHR21071:SF4 5 314 5.3E-105 T 19-04-2016 APA12_RS09650 511314e63ba5bf8e2f20226c22888c8c 314 Pfam PF01565 FAD binding domain 43 169 9.9E-18 T 19-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 APA12_RS09650 511314e63ba5bf8e2f20226c22888c8c 314 Gene3D G3DSA:3.30.465.10 94 229 2.8E-37 T 19-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APA12_RS09650 511314e63ba5bf8e2f20226c22888c8c 314 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 204 305 2.2E-27 T 19-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APA12_RS09650 511314e63ba5bf8e2f20226c22888c8c 314 SUPERFAMILY SSF56176 28 207 1.02E-38 T 19-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APA12_RS09650 511314e63ba5bf8e2f20226c22888c8c 314 SUPERFAMILY SSF56194 205 308 1.7E-32 T 19-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APA12_RS09650 511314e63ba5bf8e2f20226c22888c8c 314 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 314 90.344 T 19-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APA12_RS09650 511314e63ba5bf8e2f20226c22888c8c 314 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 32 307 3.2E-57 T 19-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APA12_RS02300 1f9dd2927be9d3f771d982cadaba02aa 169 SUPERFAMILY SSF46626 7 133 3.45E-7 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS02300 1f9dd2927be9d3f771d982cadaba02aa 169 Gene3D G3DSA:1.10.760.10 44 138 2.1E-6 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS04820 7f614df645eab6bd123c5702e16fda15 130 ProSitePatterns PS00054 Ribosomal protein S11 signature. 98 120 - T 19-04-2016 IPR018102 Ribosomal S11, conserved site APA12_RS04820 7f614df645eab6bd123c5702e16fda15 130 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 130 32.959 T 19-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APA12_RS04820 7f614df645eab6bd123c5702e16fda15 130 PANTHER PTHR11759 12 130 1.7E-66 T 19-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APA12_RS04820 7f614df645eab6bd123c5702e16fda15 130 Gene3D G3DSA:3.30.420.80 7 130 6.1E-54 T 19-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APA12_RS04820 7f614df645eab6bd123c5702e16fda15 130 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 11 127 5.4E-57 T 19-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04820 7f614df645eab6bd123c5702e16fda15 130 SUPERFAMILY SSF53137 15 130 2.55E-47 T 19-04-2016 APA12_RS04820 7f614df645eab6bd123c5702e16fda15 130 Pfam PF00411 Ribosomal protein S11 20 129 2.2E-47 T 19-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APA12_RS04820 7f614df645eab6bd123c5702e16fda15 130 PIRSF PIRSF002131 1 130 5.2E-51 T 19-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APA12_RS09415 48860eb7e49360147c7370649605c717 257 SUPERFAMILY SSF46626 25 217 5.55E-53 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS09415 48860eb7e49360147c7370649605c717 257 Gene3D G3DSA:1.20.5.100 222 255 4.1E-7 T 19-04-2016 APA12_RS09415 48860eb7e49360147c7370649605c717 257 PANTHER PTHR10266 28 255 2.0E-72 T 19-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 APA12_RS09415 48860eb7e49360147c7370649605c717 257 PANTHER PTHR10266:SF3 28 255 2.0E-72 T 19-04-2016 APA12_RS09415 48860eb7e49360147c7370649605c717 257 Pfam PF02167 Cytochrome C1 family 34 252 6.2E-71 T 19-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 APA12_RS09415 48860eb7e49360147c7370649605c717 257 Gene3D G3DSA:1.10.760.10 27 219 4.3E-64 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS09415 48860eb7e49360147c7370649605c717 257 PRINTS PR00603 Cytochrome C1 signature 200 219 9.8E-45 T 19-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 APA12_RS09415 48860eb7e49360147c7370649605c717 257 PRINTS PR00603 Cytochrome C1 signature 219 234 9.8E-45 T 19-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 APA12_RS09415 48860eb7e49360147c7370649605c717 257 PRINTS PR00603 Cytochrome C1 signature 180 199 9.8E-45 T 19-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 APA12_RS09415 48860eb7e49360147c7370649605c717 257 PRINTS PR00603 Cytochrome C1 signature 169 180 9.8E-45 T 19-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 APA12_RS09415 48860eb7e49360147c7370649605c717 257 PRINTS PR00603 Cytochrome C1 signature 32 51 9.8E-45 T 19-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 APA12_RS09415 48860eb7e49360147c7370649605c717 257 PRINTS PR00603 Cytochrome C1 signature 97 117 9.8E-45 T 19-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 APA12_RS09415 48860eb7e49360147c7370649605c717 257 PRINTS PR00603 Cytochrome C1 signature 52 71 9.8E-45 T 19-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 APA12_RS09415 48860eb7e49360147c7370649605c717 257 PRINTS PR00603 Cytochrome C1 signature 130 154 9.8E-45 T 19-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 APA12_RS11830 0fdaacc0ad31f98acb8411612e5f53ed 379 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 40 355 4.7E-127 T 19-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC APA12_RS11830 0fdaacc0ad31f98acb8411612e5f53ed 379 PANTHER PTHR30482 34 92 1.6E-141 T 19-04-2016 APA12_RS11830 0fdaacc0ad31f98acb8411612e5f53ed 379 PANTHER PTHR30482 120 355 1.6E-141 T 19-04-2016 APA12_RS11830 0fdaacc0ad31f98acb8411612e5f53ed 379 Pfam PF02653 Branched-chain amino acid transport system / permease component 49 342 2.5E-35 T 19-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APA12_RS11830 0fdaacc0ad31f98acb8411612e5f53ed 379 PANTHER PTHR30482:SF4 34 92 1.6E-141 T 19-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC APA12_RS11830 0fdaacc0ad31f98acb8411612e5f53ed 379 PANTHER PTHR30482:SF4 120 355 1.6E-141 T 19-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC APA12_RS01040 1de437740043da0bd3391284b95430a1 175 SUPERFAMILY SSF69118 3 173 1.04E-41 T 19-04-2016 IPR029032 AhpD-like APA12_RS01040 1de437740043da0bd3391284b95430a1 175 Pfam PF02627 Carboxymuconolactone decarboxylase family 95 172 2.5E-10 T 19-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APA12_RS01040 1de437740043da0bd3391284b95430a1 175 Gene3D G3DSA:1.20.1290.10 1 172 1.2E-49 T 19-04-2016 IPR029032 AhpD-like APA12_RS01040 1de437740043da0bd3391284b95430a1 175 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 111 159 8.6E-13 T 19-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APA12_RS01040 1de437740043da0bd3391284b95430a1 175 TIGRFAM TIGR00777 ahpD: alkylhydroperoxidase, AhpD family 2 173 9.7E-59 T 19-04-2016 IPR004674 Alkylhydroperoxidase AhpD GO:0006979|GO:0032843|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APA12_RS01040 1de437740043da0bd3391284b95430a1 175 Hamap MF_01676 Alkyl hydroperoxide reductase AhpD [ahpD]. 1 175 74.429 T 19-04-2016 IPR004674 Alkylhydroperoxidase AhpD GO:0006979|GO:0032843|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APA12_RS03840 089d512ebcb37b0ba43a71f3ca2ab2b3 468 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 4 466 32.655 T 19-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APA12_RS03840 089d512ebcb37b0ba43a71f3ca2ab2b3 468 Gene3D G3DSA:3.90.800.10 69 182 8.0E-37 T 19-04-2016 APA12_RS03840 089d512ebcb37b0ba43a71f3ca2ab2b3 468 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 305 1.5E-98 T 19-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 APA12_RS03840 089d512ebcb37b0ba43a71f3ca2ab2b3 468 Gene3D G3DSA:1.10.10.350 374 465 1.8E-28 T 19-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APA12_RS03840 089d512ebcb37b0ba43a71f3ca2ab2b3 468 Gene3D G3DSA:3.40.50.620 3 68 4.5E-51 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS03840 089d512ebcb37b0ba43a71f3ca2ab2b3 468 Gene3D G3DSA:3.40.50.620 183 232 4.5E-51 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS03840 089d512ebcb37b0ba43a71f3ca2ab2b3 468 SUPERFAMILY SSF48163 301 465 1.96E-36 T 19-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APA12_RS03840 089d512ebcb37b0ba43a71f3ca2ab2b3 468 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 4 463 9.1E-160 T 19-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APA12_RS03840 089d512ebcb37b0ba43a71f3ca2ab2b3 468 SUPERFAMILY SSF52374 4 298 8.58E-111 T 19-04-2016 APA12_RS03840 089d512ebcb37b0ba43a71f3ca2ab2b3 468 Gene3D G3DSA:1.10.1160.10 235 316 2.1E-29 T 19-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 APA12_RS03840 089d512ebcb37b0ba43a71f3ca2ab2b3 468 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 10 21 - T 19-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APA12_RS03840 089d512ebcb37b0ba43a71f3ca2ab2b3 468 PANTHER PTHR11451:SF41 4 310 4.6E-94 T 19-04-2016 APA12_RS03840 089d512ebcb37b0ba43a71f3ca2ab2b3 468 PANTHER PTHR11451 4 310 4.6E-94 T 19-04-2016 APA12_RS03840 089d512ebcb37b0ba43a71f3ca2ab2b3 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 197 205 2.2E-26 T 19-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APA12_RS03840 089d512ebcb37b0ba43a71f3ca2ab2b3 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 7 19 2.2E-26 T 19-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APA12_RS03840 089d512ebcb37b0ba43a71f3ca2ab2b3 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 181 191 2.2E-26 T 19-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APA12_RS03840 089d512ebcb37b0ba43a71f3ca2ab2b3 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 21 32 2.2E-26 T 19-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APA12_RS03840 089d512ebcb37b0ba43a71f3ca2ab2b3 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 36 49 2.2E-26 T 19-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APA12_RS03065 76899a061669b622ccd71255001ac7a4 265 PANTHER PTHR10992 1 258 4.6E-64 T 19-04-2016 APA12_RS03065 76899a061669b622ccd71255001ac7a4 265 PANTHER PTHR10992:SF768 1 258 4.6E-64 T 19-04-2016 APA12_RS03065 76899a061669b622ccd71255001ac7a4 265 Pfam PF12697 Alpha/beta hydrolase family 19 250 1.4E-17 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APA12_RS03065 76899a061669b622ccd71255001ac7a4 265 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 4.5E-5 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APA12_RS03065 76899a061669b622ccd71255001ac7a4 265 PRINTS PR00111 Alpha/beta hydrolase fold signature 202 216 4.5E-5 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APA12_RS03065 76899a061669b622ccd71255001ac7a4 265 PRINTS PR00111 Alpha/beta hydrolase fold signature 84 97 4.5E-5 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APA12_RS03065 76899a061669b622ccd71255001ac7a4 265 PRINTS PR00111 Alpha/beta hydrolase fold signature 42 57 4.5E-5 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APA12_RS03065 76899a061669b622ccd71255001ac7a4 265 Gene3D G3DSA:3.40.50.1820 5 256 9.8E-49 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS03065 76899a061669b622ccd71255001ac7a4 265 SUPERFAMILY SSF53474 4 255 5.28E-48 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS08055 aa0dc000e5a724f5c188afec60cf1f14 384 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 70 373 2.6E-31 T 19-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APA12_RS08055 aa0dc000e5a724f5c188afec60cf1f14 384 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 53 298 8.2E-19 T 19-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APA12_RS08055 aa0dc000e5a724f5c188afec60cf1f14 384 PANTHER PTHR30097 30 384 7.1E-38 T 19-04-2016 APA12_RS08055 aa0dc000e5a724f5c188afec60cf1f14 384 Gene3D G3DSA:2.40.50.100 70 102 8.7E-9 T 19-04-2016 APA12_RS08055 aa0dc000e5a724f5c188afec60cf1f14 384 Gene3D G3DSA:2.40.50.100 196 226 8.7E-9 T 19-04-2016 APA12_RS08055 aa0dc000e5a724f5c188afec60cf1f14 384 SUPERFAMILY SSF111369 67 303 7.45E-14 T 19-04-2016 APA12_RS08055 aa0dc000e5a724f5c188afec60cf1f14 384 PANTHER PTHR30097:SF4 30 384 7.1E-38 T 19-04-2016 APA12_RS04020 e3922d060189e1fe0bb4f18a5bee6014 242 SUPERFAMILY SSF69618 6 237 1.57E-34 T 19-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APA12_RS04020 e3922d060189e1fe0bb4f18a5bee6014 242 Gene3D G3DSA:3.40.50.10090 123 238 5.2E-11 T 19-04-2016 APA12_RS04020 e3922d060189e1fe0bb4f18a5bee6014 242 Gene3D G3DSA:3.40.50.10090 5 113 4.0E-8 T 19-04-2016 APA12_RS04020 e3922d060189e1fe0bb4f18a5bee6014 242 Pfam PF02602 Uroporphyrinogen-III synthase HemD 19 232 3.5E-29 T 19-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APA12_RS02850 41e744c02ce925253eb1a95277db093b 153 Pfam PF13701 Transposase DDE domain group 1 13 131 1.8E-37 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS02985 497e152966d5d1cc84395e1b65c1a646 305 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 52 273 1.3E-109 T 19-04-2016 IPR022488 Polyphosphate kinase-2-related APA12_RS02985 497e152966d5d1cc84395e1b65c1a646 305 PANTHER PTHR34383 15 305 1.5E-197 T 19-04-2016 APA12_RS02985 497e152966d5d1cc84395e1b65c1a646 305 PIRSF PIRSF028756 18 305 6.6E-134 T 19-04-2016 IPR016898 Polyphosphate kinase 2 APA12_RS02985 497e152966d5d1cc84395e1b65c1a646 305 SUPERFAMILY SSF52540 81 269 2.57E-30 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS02985 497e152966d5d1cc84395e1b65c1a646 305 PANTHER PTHR34383:SF1 15 305 1.5E-197 T 19-04-2016 APA12_RS02985 497e152966d5d1cc84395e1b65c1a646 305 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 52 274 6.8E-115 T 19-04-2016 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 APA12_RS02985 497e152966d5d1cc84395e1b65c1a646 305 Gene3D G3DSA:3.40.50.300 37 285 6.0E-106 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS03180 fd7797330ab20f8ba5b15ae30db57f26 391 PANTHER PTHR11751 8 391 3.2E-148 T 19-04-2016 APA12_RS03180 fd7797330ab20f8ba5b15ae30db57f26 391 Gene3D G3DSA:3.90.1150.10 269 386 4.2E-19 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APA12_RS03180 fd7797330ab20f8ba5b15ae30db57f26 391 SUPERFAMILY SSF53383 5 386 5.72E-99 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APA12_RS03180 fd7797330ab20f8ba5b15ae30db57f26 391 Pfam PF00155 Aminotransferase class I and II 28 382 1.1E-59 T 19-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APA12_RS03180 fd7797330ab20f8ba5b15ae30db57f26 391 PANTHER PTHR11751:SF428 8 391 3.2E-148 T 19-04-2016 APA12_RS03180 fd7797330ab20f8ba5b15ae30db57f26 391 Gene3D G3DSA:3.40.640.10 42 268 2.6E-71 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APA12_RS03930 1040fb7a18ea40483b7373a480ccc3e8 498 SUPERFAMILY SSF56762 158 495 4.06E-54 T 19-04-2016 IPR029014 NiFe hydrogenase-like APA12_RS03930 1040fb7a18ea40483b7373a480ccc3e8 498 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 268 415 8.9E-15 T 19-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 APA12_RS03930 1040fb7a18ea40483b7373a480ccc3e8 498 Gene3D G3DSA:1.10.645.10 150 362 3.3E-21 T 19-04-2016 IPR029014 NiFe hydrogenase-like APA12_RS03930 1040fb7a18ea40483b7373a480ccc3e8 498 PANTHER PTHR11993:SF16 151 493 2.3E-41 T 19-04-2016 APA12_RS03930 1040fb7a18ea40483b7373a480ccc3e8 498 SUPERFAMILY SSF143243 24 153 2.22E-5 T 19-04-2016 APA12_RS03930 1040fb7a18ea40483b7373a480ccc3e8 498 Gene3D G3DSA:1.10.645.10 363 490 2.1E-8 T 19-04-2016 IPR029014 NiFe hydrogenase-like APA12_RS03930 1040fb7a18ea40483b7373a480ccc3e8 498 PANTHER PTHR11993 151 493 2.3E-41 T 19-04-2016 APA12_RS05560 6abef5c6c2e9cf95c62bc6be00b9b488 258 PANTHER PTHR34266 2 253 5.9E-118 T 19-04-2016 APA12_RS05560 6abef5c6c2e9cf95c62bc6be00b9b488 258 Pfam PF05690 Thiazole biosynthesis protein ThiG 6 250 1.1E-104 T 19-04-2016 APA12_RS05560 6abef5c6c2e9cf95c62bc6be00b9b488 258 Hamap MF_00443 Thiazole synthase [thiG]. 2 256 39.667 T 19-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 APA12_RS05560 6abef5c6c2e9cf95c62bc6be00b9b488 258 Gene3D G3DSA:3.20.20.70 14 255 3.0E-52 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS05560 6abef5c6c2e9cf95c62bc6be00b9b488 258 SUPERFAMILY SSF110399 5 242 4.45E-78 T 19-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 APA12_RS05015 f627cd0bb40cc6c8491b03ba41b93ba3 153 SUPERFAMILY SSF54995 1 103 1.7E-31 T 19-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 APA12_RS05015 f627cd0bb40cc6c8491b03ba41b93ba3 153 TIGRFAM TIGR00166 S6: ribosomal protein bS6 2 94 4.6E-22 T 19-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 APA12_RS05015 f627cd0bb40cc6c8491b03ba41b93ba3 153 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 20.005 T 19-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 APA12_RS05015 f627cd0bb40cc6c8491b03ba41b93ba3 153 PANTHER PTHR21011 1 95 1.2E-26 T 19-04-2016 APA12_RS05015 f627cd0bb40cc6c8491b03ba41b93ba3 153 Gene3D G3DSA:3.30.70.60 1 103 3.4E-33 T 19-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 APA12_RS05015 f627cd0bb40cc6c8491b03ba41b93ba3 153 Pfam PF01250 Ribosomal protein S6 4 92 2.9E-27 T 19-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 APA12_RS12885 9c30842a4f491c932bda4fb2455451d2 285 TIGRFAM TIGR01083 nth: endonuclease III 70 257 3.9E-77 T 19-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 APA12_RS12885 9c30842a4f491c932bda4fb2455451d2 285 PANTHER PTHR10359 33 279 1.1E-76 T 19-04-2016 APA12_RS12885 9c30842a4f491c932bda4fb2455451d2 285 PANTHER PTHR10359:SF18 33 279 1.1E-76 T 19-04-2016 APA12_RS12885 9c30842a4f491c932bda4fb2455451d2 285 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 97 229 1.9E-21 T 19-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 APA12_RS12885 9c30842a4f491c932bda4fb2455451d2 285 Hamap MF_00942 Endonuclease III [nth]. 38 272 35.645 T 19-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 APA12_RS12885 9c30842a4f491c932bda4fb2455451d2 285 Gene3D G3DSA:1.10.1670.10 186 268 4.0E-30 T 19-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal APA12_RS12885 9c30842a4f491c932bda4fb2455451d2 285 SUPERFAMILY SSF48150 64 271 1.41E-67 T 19-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APA12_RS12885 9c30842a4f491c932bda4fb2455451d2 285 Gene3D G3DSA:1.10.340.30 85 185 5.9E-35 T 19-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APA12_RS12885 9c30842a4f491c932bda4fb2455451d2 285 Pfam PF00633 Helix-hairpin-helix motif 163 190 2.7E-8 T 19-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 APA12_RS12885 9c30842a4f491c932bda4fb2455451d2 285 SMART SM00478 101 248 2.0E-54 T 19-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 APA12_RS07795 f888ebe0c65cc8e912b322dc4520e805 229 Gene3D G3DSA:2.60.120.10 132 178 2.6E-4 T 19-04-2016 IPR014710 RmlC-like jelly roll fold APA12_RS07795 f888ebe0c65cc8e912b322dc4520e805 229 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 178 9.8E-13 T 19-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 APA12_RS07795 f888ebe0c65cc8e912b322dc4520e805 229 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 229 42.815 T 19-04-2016 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 APA12_RS07795 f888ebe0c65cc8e912b322dc4520e805 229 PANTHER PTHR41536 2 229 1.2E-95 T 19-04-2016 APA12_RS07795 f888ebe0c65cc8e912b322dc4520e805 229 PANTHER PTHR41536:SF1 2 229 1.2E-95 T 19-04-2016 APA12_RS07795 f888ebe0c65cc8e912b322dc4520e805 229 SMART SM00702 1 179 4.6E-13 T 19-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 APA12_RS01880 51eba5f4a0c05d82553ccb1685dd0b18 441 PIRSF PIRSF000151 26 441 1.8E-162 T 19-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APA12_RS01880 51eba5f4a0c05d82553ccb1685dd0b18 441 PANTHER PTHR11063:SF8 36 440 8.3E-163 T 19-04-2016 APA12_RS01880 51eba5f4a0c05d82553ccb1685dd0b18 441 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 32 440 38.882 T 19-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APA12_RS01880 51eba5f4a0c05d82553ccb1685dd0b18 441 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 347 368 - T 19-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APA12_RS01880 51eba5f4a0c05d82553ccb1685dd0b18 441 Pfam PF00171 Aldehyde dehydrogenase family 13 305 5.6E-11 T 19-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APA12_RS01880 51eba5f4a0c05d82553ccb1685dd0b18 441 SUPERFAMILY SSF53720 33 440 4.06E-105 T 19-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APA12_RS01880 51eba5f4a0c05d82553ccb1685dd0b18 441 PANTHER PTHR11063 36 440 8.3E-163 T 19-04-2016 APA12_RS01880 51eba5f4a0c05d82553ccb1685dd0b18 441 Gene3D G3DSA:3.40.309.10 251 397 7.8E-35 T 19-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APA12_RS01880 51eba5f4a0c05d82553ccb1685dd0b18 441 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 40 429 2.4E-130 T 19-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APA12_RS01880 51eba5f4a0c05d82553ccb1685dd0b18 441 Gene3D G3DSA:3.40.605.10 30 248 2.6E-94 T 19-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APA12_RS01880 51eba5f4a0c05d82553ccb1685dd0b18 441 Gene3D G3DSA:3.40.605.10 398 440 2.6E-94 T 19-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APA12_RS00795 175f2a3a37d1df28b3021b9d0eae1b28 421 SUPERFAMILY SSF53822 56 417 1.14E-90 T 19-04-2016 IPR028082 Periplasmic binding protein-like I APA12_RS00795 175f2a3a37d1df28b3021b9d0eae1b28 421 PANTHER PTHR30483:SF8 11 421 1.7E-192 T 19-04-2016 APA12_RS00795 175f2a3a37d1df28b3021b9d0eae1b28 421 Gene3D G3DSA:3.40.50.2300 331 387 4.0E-52 T 19-04-2016 APA12_RS00795 175f2a3a37d1df28b3021b9d0eae1b28 421 Gene3D G3DSA:3.40.50.2300 51 175 4.0E-52 T 19-04-2016 APA12_RS00795 175f2a3a37d1df28b3021b9d0eae1b28 421 Gene3D G3DSA:3.40.50.2300 176 330 3.1E-18 T 19-04-2016 APA12_RS00795 175f2a3a37d1df28b3021b9d0eae1b28 421 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 57 416 5.8E-165 T 19-04-2016 IPR017777 ABC transporter, urea, substrate-binding, UrtA APA12_RS00795 175f2a3a37d1df28b3021b9d0eae1b28 421 Pfam PF13433 Periplasmic binding protein domain 58 418 8.0E-132 T 19-04-2016 APA12_RS00795 175f2a3a37d1df28b3021b9d0eae1b28 421 PANTHER PTHR30483 11 421 1.7E-192 T 19-04-2016 APA12_RS06530 726561722bc403501fbb86ff3d5c7755 297 Pfam PF01522 Polysaccharide deacetylase 75 183 2.5E-10 T 19-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 APA12_RS06530 726561722bc403501fbb86ff3d5c7755 297 PANTHER PTHR10587 8 295 1.5E-154 T 19-04-2016 APA12_RS06530 726561722bc403501fbb86ff3d5c7755 297 PANTHER PTHR10587:SF72 8 295 1.5E-154 T 19-04-2016 APA12_RS06530 726561722bc403501fbb86ff3d5c7755 297 Gene3D G3DSA:3.20.20.370 3 296 5.2E-97 T 19-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 APA12_RS06530 726561722bc403501fbb86ff3d5c7755 297 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 4 297 3.1E-155 T 19-04-2016 IPR017625 Putative urate catabolism protein APA12_RS06530 726561722bc403501fbb86ff3d5c7755 297 SUPERFAMILY SSF88713 3 296 5.28E-84 T 19-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 APA12_RS12815 3748eebddd79837f7e50ccf974590872 173 Pfam PF10634 Fe2+ transport protein 24 170 1.2E-57 T 19-04-2016 IPR018470 Periplasmic metal-binding protein Tp34-type APA12_RS12815 3748eebddd79837f7e50ccf974590872 173 PIRSF PIRSF017018 1 173 1.2E-67 T 19-04-2016 IPR018470 Periplasmic metal-binding protein Tp34-type APA12_RS10035 d3fc9a8e8e9671baf77c6d747402c8f4 324 TIGRFAM TIGR00938 thrB_alt: homoserine kinase 1 312 1.0E-111 T 19-04-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 APA12_RS10035 d3fc9a8e8e9671baf77c6d747402c8f4 324 Pfam PF01636 Phosphotransferase enzyme family 28 262 8.1E-35 T 19-04-2016 IPR002575 Aminoglycoside phosphotransferase APA12_RS10035 d3fc9a8e8e9671baf77c6d747402c8f4 324 Gene3D G3DSA:3.90.1200.10 106 317 2.9E-64 T 19-04-2016 APA12_RS10035 d3fc9a8e8e9671baf77c6d747402c8f4 324 SUPERFAMILY SSF56112 5 315 2.62E-78 T 19-04-2016 IPR011009 Protein kinase-like domain APA12_RS10035 d3fc9a8e8e9671baf77c6d747402c8f4 324 Hamap MF_00301 Homoserine kinase [thrB]. 1 324 149.054 T 19-04-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 APA12_RS10035 d3fc9a8e8e9671baf77c6d747402c8f4 324 Gene3D G3DSA:3.30.200.20 1 104 2.2E-39 T 19-04-2016 APA12_RS10035 d3fc9a8e8e9671baf77c6d747402c8f4 324 PANTHER PTHR21064 9 293 8.4E-42 T 19-04-2016 APA12_RS08015 3252dc2d5da8f96584c877890b6f504a 87 PANTHER PTHR33609 2 87 3.6E-35 T 19-04-2016 APA12_RS08015 3252dc2d5da8f96584c877890b6f504a 87 Gene3D G3DSA:1.10.10.60 15 84 1.1E-14 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS08015 3252dc2d5da8f96584c877890b6f504a 87 Pfam PF01527 Transposase 4 71 7.4E-22 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 APA12_RS08015 3252dc2d5da8f96584c877890b6f504a 87 SUPERFAMILY SSF46689 1 83 9.5E-15 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS13370 d05a40aa7d26c92e45e196ae11fc8c08 273 Gene3D G3DSA:1.10.3730.10 165 271 2.6E-31 T 19-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 APA12_RS13370 d05a40aa7d26c92e45e196ae11fc8c08 273 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 8 271 23.968 T 19-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 APA12_RS13370 d05a40aa7d26c92e45e196ae11fc8c08 273 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 166 271 1.6E-30 T 19-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 APA12_RS13370 d05a40aa7d26c92e45e196ae11fc8c08 273 SUPERFAMILY SSF51735 10 163 6.41E-25 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS13370 d05a40aa7d26c92e45e196ae11fc8c08 273 PANTHER PTHR11645:SF0 13 271 4.1E-71 T 19-04-2016 APA12_RS13370 d05a40aa7d26c92e45e196ae11fc8c08 273 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 10 271 8.2E-66 T 19-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 APA12_RS13370 d05a40aa7d26c92e45e196ae11fc8c08 273 PANTHER PTHR11645 13 271 4.1E-71 T 19-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 APA12_RS13370 d05a40aa7d26c92e45e196ae11fc8c08 273 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 10 97 1.4E-7 T 19-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal APA12_RS13370 d05a40aa7d26c92e45e196ae11fc8c08 273 Gene3D G3DSA:3.40.50.720 10 163 3.8E-31 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS13370 d05a40aa7d26c92e45e196ae11fc8c08 273 SUPERFAMILY SSF48179 165 272 8.16E-29 T 19-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APA12_RS13370 d05a40aa7d26c92e45e196ae11fc8c08 273 PIRSF PIRSF000193 8 273 5.0E-55 T 19-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 APA12_RS06960 c9d6923d90ee991e6361c0ee32157365 278 PANTHER PTHR11662 3 274 4.4E-97 T 19-04-2016 APA12_RS06960 c9d6923d90ee991e6361c0ee32157365 278 SUPERFAMILY SSF103473 2 276 1.31E-43 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS06960 c9d6923d90ee991e6361c0ee32157365 278 Gene3D G3DSA:1.20.1250.20 1 47 1.7E-5 T 19-04-2016 APA12_RS06960 c9d6923d90ee991e6361c0ee32157365 278 Gene3D G3DSA:1.20.1250.20 81 272 4.9E-32 T 19-04-2016 APA12_RS06960 c9d6923d90ee991e6361c0ee32157365 278 PANTHER PTHR11662:SF18 3 274 4.4E-97 T 19-04-2016 APA12_RS06960 c9d6923d90ee991e6361c0ee32157365 278 Pfam PF07690 Major Facilitator Superfamily 156 267 1.9E-8 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APA12_RS06960 c9d6923d90ee991e6361c0ee32157365 278 Pfam PF07690 Major Facilitator Superfamily 2 147 1.1E-18 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APA12_RS02330 0475f68b99113df2bbfbfa95e8cb6a3d 482 Gene3D G3DSA:3.40.605.10 6 264 5.1E-100 T 19-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APA12_RS02330 0475f68b99113df2bbfbfa95e8cb6a3d 482 PANTHER PTHR11699 1 481 8.9E-219 T 19-04-2016 APA12_RS02330 0475f68b99113df2bbfbfa95e8cb6a3d 482 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 250 257 - T 19-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 APA12_RS02330 0475f68b99113df2bbfbfa95e8cb6a3d 482 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 278 289 - T 19-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 APA12_RS02330 0475f68b99113df2bbfbfa95e8cb6a3d 482 SUPERFAMILY SSF53720 5 481 1.44E-169 T 19-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APA12_RS02330 0475f68b99113df2bbfbfa95e8cb6a3d 482 Pfam PF00171 Aldehyde dehydrogenase family 15 478 1.2E-174 T 19-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APA12_RS02330 0475f68b99113df2bbfbfa95e8cb6a3d 482 Gene3D G3DSA:3.40.309.10 265 443 4.7E-70 T 19-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APA12_RS10410 ef1b4e8b296051e04aa75bec0d823d93 278 SUPERFAMILY SSF54001 9 268 3.34E-46 T 19-04-2016 APA12_RS10410 ef1b4e8b296051e04aa75bec0d823d93 278 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 7 84 1.2E-23 T 19-04-2016 IPR013589 Bacterial transglutaminase-like, N-terminal APA12_RS10410 ef1b4e8b296051e04aa75bec0d823d93 278 SMART SM00460 162 232 1.7E-13 T 19-04-2016 IPR002931 Transglutaminase-like APA12_RS10410 ef1b4e8b296051e04aa75bec0d823d93 278 PANTHER PTHR33490 1 269 1.0E-76 T 19-04-2016 APA12_RS10410 ef1b4e8b296051e04aa75bec0d823d93 278 Pfam PF01841 Transglutaminase-like superfamily 127 229 2.2E-21 T 19-04-2016 IPR002931 Transglutaminase-like APA12_RS10410 ef1b4e8b296051e04aa75bec0d823d93 278 PANTHER PTHR33490:SF1 1 269 1.0E-76 T 19-04-2016 APA12_RS10410 ef1b4e8b296051e04aa75bec0d823d93 278 Gene3D G3DSA:3.90.260.10 100 233 1.4E-11 T 19-04-2016 IPR002931 Transglutaminase-like APA12_RS13430 33b6863f07dd112bd09fefaa60c8f963 218 PANTHER PTHR21235 7 212 8.8E-70 T 19-04-2016 APA12_RS13430 33b6863f07dd112bd09fefaa60c8f963 218 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 6 212 30.489 T 19-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 APA12_RS13430 33b6863f07dd112bd09fefaa60c8f963 218 PIRSF PIRSF000495 5 215 5.4E-62 T 19-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 APA12_RS13430 33b6863f07dd112bd09fefaa60c8f963 218 Pfam PF00117 Glutamine amidotransferase class-I 18 210 1.1E-16 T 19-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 APA12_RS13430 33b6863f07dd112bd09fefaa60c8f963 218 Gene3D G3DSA:3.40.50.880 5 212 4.6E-68 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like APA12_RS13430 33b6863f07dd112bd09fefaa60c8f963 218 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 7 211 4.5E-58 T 19-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 APA12_RS13430 33b6863f07dd112bd09fefaa60c8f963 218 SUPERFAMILY SSF52317 7 212 2.29E-49 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like APA12_RS13430 33b6863f07dd112bd09fefaa60c8f963 218 PANTHER PTHR21235:SF1 7 212 8.8E-70 T 19-04-2016 APA12_RS07635 e5d2bc0a1655dcbf8be75d70978abb19 324 SUPERFAMILY SSF161098 92 304 4.58E-12 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS07635 e5d2bc0a1655dcbf8be75d70978abb19 324 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 321 4.5E-29 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS07635 e5d2bc0a1655dcbf8be75d70978abb19 324 PANTHER PTHR30465 1 322 3.6E-78 T 19-04-2016 APA12_RS07635 e5d2bc0a1655dcbf8be75d70978abb19 324 PANTHER PTHR30465:SF0 1 322 3.6E-78 T 19-04-2016 APA12_RS07480 938f322fb168839917b84f6327cd8fe1 209 Pfam PF12804 MobA-like NTP transferase domain 5 151 9.5E-23 T 19-04-2016 IPR025877 MobA-like NTP transferase APA12_RS07480 938f322fb168839917b84f6327cd8fe1 209 PANTHER PTHR19136 2 205 1.2E-23 T 19-04-2016 APA12_RS07480 938f322fb168839917b84f6327cd8fe1 209 SUPERFAMILY SSF53448 1 189 1.69E-21 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS07480 938f322fb168839917b84f6327cd8fe1 209 PANTHER PTHR19136:SF81 2 205 1.2E-23 T 19-04-2016 APA12_RS07480 938f322fb168839917b84f6327cd8fe1 209 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 1 192 22.584 T 19-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 APA12_RS07480 938f322fb168839917b84f6327cd8fe1 209 Gene3D G3DSA:3.90.550.10 1 197 3.8E-37 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS09155 c17d611355b4f89fd38a8447843452b0 297 SUPERFAMILY SSF53448 11 295 2.02E-82 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS09155 c17d611355b4f89fd38a8447843452b0 297 Gene3D G3DSA:3.90.550.10 10 271 3.9E-64 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS09155 c17d611355b4f89fd38a8447843452b0 297 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 12 296 1.7E-135 T 19-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 APA12_RS09155 c17d611355b4f89fd38a8447843452b0 297 Pfam PF00483 Nucleotidyl transferase 12 248 8.6E-64 T 19-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 APA12_RS09155 c17d611355b4f89fd38a8447843452b0 297 PANTHER PTHR22572 12 278 2.4E-150 T 19-04-2016 APA12_RS09155 c17d611355b4f89fd38a8447843452b0 297 PANTHER PTHR22572:SF105 12 278 2.4E-150 T 19-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 APA12_RS00020 c5bd6306cdc09b8a54a0efcea9a26338 159 PANTHER PTHR35146 1 151 2.3E-45 T 19-04-2016 APA12_RS00020 c5bd6306cdc09b8a54a0efcea9a26338 159 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 2 146 30.545 T 19-04-2016 IPR003791 Protein of unknown function UPF0178 APA12_RS00020 c5bd6306cdc09b8a54a0efcea9a26338 159 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 16 143 2.6E-46 T 19-04-2016 IPR003791 Protein of unknown function UPF0178 APA12_RS00020 c5bd6306cdc09b8a54a0efcea9a26338 159 PANTHER PTHR35146:SF1 1 151 2.3E-45 T 19-04-2016 APA12_RS03195 79564dcfc7e8dcf2156e21095a5b3a66 368 SUPERFAMILY SSF74653 286 345 3.73E-9 T 19-04-2016 APA12_RS03195 79564dcfc7e8dcf2156e21095a5b3a66 368 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 290 367 2.3E-11 T 19-04-2016 IPR006260 TonB, C-terminal GO:0006810 APA12_RS03195 79564dcfc7e8dcf2156e21095a5b3a66 368 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 291 366 3.3E-7 T 19-04-2016 IPR006260 TonB, C-terminal GO:0006810 APA12_RS11590 4392d387345cc2361e2c5222951efbea 70 Pfam PF13560 Helix-turn-helix domain 2 50 5.1E-8 T 19-04-2016 APA12_RS11590 4392d387345cc2361e2c5222951efbea 70 SUPERFAMILY SSF47413 2 55 4.07E-8 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APA12_RS11590 4392d387345cc2361e2c5222951efbea 70 Gene3D G3DSA:1.10.260.40 2 47 6.5E-9 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APA12_RS09855 cae89e07b75ace386fe730fd137e7edb 263 Pfam PF11967 Recombination protein O N terminal 12 67 1.2E-6 T 19-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal APA12_RS09855 cae89e07b75ace386fe730fd137e7edb 263 Hamap MF_00201 DNA repair protein RecO [recO]. 9 250 14.635 T 19-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 APA12_RS09855 cae89e07b75ace386fe730fd137e7edb 263 Pfam PF02565 Recombination protein O C terminal 94 229 8.4E-23 T 19-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 APA12_RS09855 cae89e07b75ace386fe730fd137e7edb 263 TIGRFAM TIGR00613 reco: DNA repair protein RecO 16 208 6.9E-19 T 19-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 APA12_RS09855 cae89e07b75ace386fe730fd137e7edb 263 ProDom PD202328 DNA REPAIR RECOMBINATION RECO DAMAGE O O RECO-RELATED RECOMBINATIONAL RP549 146 248 2.0E-21 T 19-04-2016 APA12_RS09855 cae89e07b75ace386fe730fd137e7edb 263 PANTHER PTHR33991 9 259 4.2E-12 T 19-04-2016 APA12_RS09855 cae89e07b75ace386fe730fd137e7edb 263 SUPERFAMILY SSF57863 96 196 1.83E-9 T 19-04-2016 APA12_RS01155 248b34a305fe57f3f05f8368f84cc10d 122 PANTHER PTHR12910 8 122 3.4E-18 T 19-04-2016 IPR007763 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 GO:0008137|GO:0009055|GO:0016020 APA12_RS01155 248b34a305fe57f3f05f8368f84cc10d 122 Pfam PF05071 NADH ubiquinone oxidoreductase subunit NDUFA12 14 120 5.1E-23 T 19-04-2016 IPR007763 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 GO:0008137|GO:0009055|GO:0016020 APA12_RS01155 248b34a305fe57f3f05f8368f84cc10d 122 PANTHER PTHR12910:SF3 8 122 3.4E-18 T 19-04-2016 APA12_RS08525 e3d55ca9e0c30d84528b52ea5be0983d 322 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 82 104 - T 19-04-2016 IPR030470 UbiA prenyltransferase conserved site APA12_RS08525 e3d55ca9e0c30d84528b52ea5be0983d 322 PANTHER PTHR11048 30 321 2.1E-69 T 19-04-2016 APA12_RS08525 e3d55ca9e0c30d84528b52ea5be0983d 322 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 28 317 19.525 T 19-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 APA12_RS08525 e3d55ca9e0c30d84528b52ea5be0983d 322 Pfam PF01040 UbiA prenyltransferase family 45 281 1.8E-57 T 19-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 APA12_RS08525 e3d55ca9e0c30d84528b52ea5be0983d 322 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 31 315 1.3E-98 T 19-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 APA12_RS11330 669f6e7672ff658ca39b3e66606455f3 351 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 71 93 - T 19-04-2016 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 APA12_RS11330 669f6e7672ff658ca39b3e66606455f3 351 SUPERFAMILY SSF50022 19 139 4.45E-34 T 19-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APA12_RS11330 669f6e7672ff658ca39b3e66606455f3 351 Gene3D G3DSA:2.102.10.10 31 142 6.5E-31 T 19-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APA12_RS11330 669f6e7672ff658ca39b3e66606455f3 351 PANTHER PTHR21266:SF19 28 343 1.7E-46 T 19-04-2016 APA12_RS11330 669f6e7672ff658ca39b3e66606455f3 351 PANTHER PTHR21266 28 343 1.7E-46 T 19-04-2016 APA12_RS11330 669f6e7672ff658ca39b3e66606455f3 351 SUPERFAMILY SSF55961 138 343 4.39E-26 T 19-04-2016 APA12_RS11330 669f6e7672ff658ca39b3e66606455f3 351 Pfam PF00355 Rieske [2Fe-2S] domain 32 111 1.4E-18 T 19-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APA12_RS05085 88fe46431caacccbb24583a56a3ad21f 220 PANTHER PTHR34108 9 219 1.2E-42 T 19-04-2016 APA12_RS05085 88fe46431caacccbb24583a56a3ad21f 220 SUPERFAMILY SSF63848 114 219 6.93E-28 T 19-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 APA12_RS05085 88fe46431caacccbb24583a56a3ad21f 220 Gene3D G3DSA:2.160.20.70 102 219 1.5E-33 T 19-04-2016 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 APA12_RS05085 88fe46431caacccbb24583a56a3ad21f 220 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 15 71 3.1E-5 T 19-04-2016 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 APA12_RS05085 88fe46431caacccbb24583a56a3ad21f 220 PANTHER PTHR34108:SF1 9 219 1.2E-42 T 19-04-2016 APA12_RS05085 88fe46431caacccbb24583a56a3ad21f 220 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 1 220 22.039 T 19-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 APA12_RS05085 88fe46431caacccbb24583a56a3ad21f 220 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 117 215 1.2E-27 T 19-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 APA12_RS05085 88fe46431caacccbb24583a56a3ad21f 220 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 16 218 1.1E-42 T 19-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 APA12_RS04670 22280568898413a82cce4937d5904785 124 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 1 124 24.695 T 19-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04670 22280568898413a82cce4937d5904785 124 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 58 124 1.5E-31 T 19-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 APA12_RS04670 22280568898413a82cce4937d5904785 124 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 124 2.2E-48 T 19-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04670 22280568898413a82cce4937d5904785 124 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 50 1.5E-18 T 19-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04670 22280568898413a82cce4937d5904785 124 SUPERFAMILY SSF54736 53 124 5.76E-26 T 19-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like APA12_RS04670 22280568898413a82cce4937d5904785 124 Gene3D G3DSA:1.20.5.710 6 50 8.8E-17 T 19-04-2016 APA12_RS04670 22280568898413a82cce4937d5904785 124 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 60 124 1.0E-23 T 19-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 APA12_RS04670 22280568898413a82cce4937d5904785 124 SUPERFAMILY SSF48300 4 60 7.85E-16 T 19-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04670 22280568898413a82cce4937d5904785 124 Gene3D G3DSA:3.30.1390.10 53 124 2.7E-35 T 19-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like APA12_RS08355 8454ba1d534b3dbd08a376d19856f99d 217 SUPERFAMILY SSF52096 21 206 4.66E-71 T 19-04-2016 IPR029045 ClpP/crotonase-like domain APA12_RS08355 8454ba1d534b3dbd08a376d19856f99d 217 Pfam PF00574 Clp protease 23 203 3.8E-83 T 19-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA APA12_RS08355 8454ba1d534b3dbd08a376d19856f99d 217 PRINTS PR00127 Clp protease catalytic subunit P signature 101 118 2.3E-50 T 19-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APA12_RS08355 8454ba1d534b3dbd08a376d19856f99d 217 PRINTS PR00127 Clp protease catalytic subunit P signature 122 141 2.3E-50 T 19-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APA12_RS08355 8454ba1d534b3dbd08a376d19856f99d 217 PRINTS PR00127 Clp protease catalytic subunit P signature 179 198 2.3E-50 T 19-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APA12_RS08355 8454ba1d534b3dbd08a376d19856f99d 217 PRINTS PR00127 Clp protease catalytic subunit P signature 30 45 2.3E-50 T 19-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APA12_RS08355 8454ba1d534b3dbd08a376d19856f99d 217 PRINTS PR00127 Clp protease catalytic subunit P signature 70 90 2.3E-50 T 19-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APA12_RS08355 8454ba1d534b3dbd08a376d19856f99d 217 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 101 112 - T 19-04-2016 IPR018215 ClpP, Ser active site APA12_RS08355 8454ba1d534b3dbd08a376d19856f99d 217 PANTHER PTHR10381:SF11 14 203 7.0E-134 T 19-04-2016 APA12_RS08355 8454ba1d534b3dbd08a376d19856f99d 217 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 123 136 - T 19-04-2016 IPR033135 ClpP, histidine active site APA12_RS08355 8454ba1d534b3dbd08a376d19856f99d 217 Gene3D G3DSA:3.90.226.10 22 209 5.0E-86 T 19-04-2016 IPR029045 ClpP/crotonase-like domain APA12_RS08355 8454ba1d534b3dbd08a376d19856f99d 217 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 14 204 42.621 T 19-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APA12_RS08355 8454ba1d534b3dbd08a376d19856f99d 217 PANTHER PTHR10381 14 203 7.0E-134 T 19-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA APA12_RS07020 926e48a690bdb7a607389788d24506f3 497 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 5 481 2.5E-212 T 19-04-2016 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373 APA12_RS07020 926e48a690bdb7a607389788d24506f3 497 PANTHER PTHR11699:SF188 1 493 3.2E-274 T 19-04-2016 APA12_RS07020 926e48a690bdb7a607389788d24506f3 497 Gene3D G3DSA:3.40.605.10 3 260 5.1E-90 T 19-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APA12_RS07020 926e48a690bdb7a607389788d24506f3 497 Pfam PF00171 Aldehyde dehydrogenase family 17 477 1.5E-142 T 19-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APA12_RS07020 926e48a690bdb7a607389788d24506f3 497 PANTHER PTHR11699 1 493 3.2E-274 T 19-04-2016 APA12_RS07020 926e48a690bdb7a607389788d24506f3 497 Gene3D G3DSA:3.40.309.10 261 442 1.2E-64 T 19-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APA12_RS07020 926e48a690bdb7a607389788d24506f3 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 274 285 - T 19-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 APA12_RS07020 926e48a690bdb7a607389788d24506f3 497 SUPERFAMILY SSF53720 3 481 3.01E-150 T 19-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APA12_RS06365 bc27b7dea94e01da5097fa49e9ff9955 564 PANTHER PTHR24222 33 557 1.4E-137 T 19-04-2016 APA12_RS06365 bc27b7dea94e01da5097fa49e9ff9955 564 SUPERFAMILY SSF90123 20 327 7.59E-32 T 19-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APA12_RS06365 bc27b7dea94e01da5097fa49e9ff9955 564 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 20 542 1.3E-128 T 19-04-2016 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0006810|GO:0016021|GO:0042626 APA12_RS06365 bc27b7dea94e01da5097fa49e9ff9955 564 Pfam PF00664 ABC transporter transmembrane region 76 275 1.3E-9 T 19-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APA12_RS06365 bc27b7dea94e01da5097fa49e9ff9955 564 Pfam PF00005 ABC transporter 364 511 6.8E-30 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS06365 bc27b7dea94e01da5097fa49e9ff9955 564 SUPERFAMILY SSF52540 340 558 1.01E-65 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS06365 bc27b7dea94e01da5097fa49e9ff9955 564 Gene3D G3DSA:3.40.50.300 345 558 4.4E-61 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS06365 bc27b7dea94e01da5097fa49e9ff9955 564 PANTHER PTHR24222:SF30 33 557 1.4E-137 T 19-04-2016 APA12_RS06365 bc27b7dea94e01da5097fa49e9ff9955 564 Gene3D G3DSA:1.20.1560.10 22 333 5.8E-24 T 19-04-2016 APA12_RS06365 bc27b7dea94e01da5097fa49e9ff9955 564 SMART SM00382 372 558 3.9E-12 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS03495 967a0cb6fa925bce87c48cc7e77790bc 262 Pfam PF08378 Nuclease-related domain 84 193 2.4E-23 T 19-04-2016 IPR011528 Nuclease-related domain, NERD APA12_RS04195 ef810bea7e187d65a4abd6e844862dc7 122 Gene3D G3DSA:3.30.1330.70 10 121 9.2E-21 T 19-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 APA12_RS04195 ef810bea7e187d65a4abd6e844862dc7 122 SUPERFAMILY SSF103084 10 121 1.11E-17 T 19-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 APA12_RS04195 ef810bea7e187d65a4abd6e844862dc7 122 Pfam PF05866 Endodeoxyribonuclease RusA 19 121 2.9E-22 T 19-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 APA12_RS04390 e7955b6072c2152c104407c6d09d3cdf 259 PIRSF PIRSF029730 3 256 9.9E-91 T 19-04-2016 IPR011227 Uncharacterised conserved protein UCP029730 APA12_RS04390 e7955b6072c2152c104407c6d09d3cdf 259 SUPERFAMILY SSF53187 7 251 2.95E-76 T 19-04-2016 APA12_RS04390 e7955b6072c2152c104407c6d09d3cdf 259 Pfam PF05013 N-formylglutamate amidohydrolase 22 227 7.4E-46 T 19-04-2016 IPR007709 N-formylglutamate amidohydrolase APA12_RS04390 e7955b6072c2152c104407c6d09d3cdf 259 Gene3D G3DSA:3.40.630.40 12 252 9.7E-84 T 19-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APA12_RS05680 994850626612bd76ef129683ddd103fc 420 Pfam PF10282 Lactonase, 7-bladed beta-propeller 50 415 2.1E-105 T 19-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 APA12_RS05680 994850626612bd76ef129683ddd103fc 420 PANTHER PTHR30344 51 420 7.9E-91 T 19-04-2016 APA12_RS05680 994850626612bd76ef129683ddd103fc 420 PANTHER PTHR30344:SF1 51 420 7.9E-91 T 19-04-2016 APA12_RS05680 994850626612bd76ef129683ddd103fc 420 SUPERFAMILY SSF51004 211 415 4.05E-47 T 19-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain APA12_RS05680 994850626612bd76ef129683ddd103fc 420 SUPERFAMILY SSF51004 62 184 4.05E-47 T 19-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain APA12_RS05680 994850626612bd76ef129683ddd103fc 420 Gene3D G3DSA:2.130.10.10 50 416 9.8E-96 T 19-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APA12_RS07605 5fc606f146586c8741d07f4381f33b77 170 PANTHER PTHR38589 22 158 1.0E-28 T 19-04-2016 APA12_RS07605 5fc606f146586c8741d07f4381f33b77 170 PANTHER PTHR38589:SF1 22 158 1.0E-28 T 19-04-2016 APA12_RS07605 5fc606f146586c8741d07f4381f33b77 170 Pfam PF03734 L,D-transpeptidase catalytic domain 21 155 3.7E-9 T 19-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 APA12_RS06250 e80a4af499f61b56ab80cef58375a055 582 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 262 1.9E-16 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS06250 e80a4af499f61b56ab80cef58375a055 582 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 396 580 4.7E-10 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS06250 e80a4af499f61b56ab80cef58375a055 582 PANTHER PTHR30151:SF10 73 231 6.5E-130 T 19-04-2016 APA12_RS06250 e80a4af499f61b56ab80cef58375a055 582 PANTHER PTHR30151:SF10 373 579 6.5E-130 T 19-04-2016 APA12_RS06250 e80a4af499f61b56ab80cef58375a055 582 PANTHER PTHR30151 73 231 6.5E-130 T 19-04-2016 APA12_RS06250 e80a4af499f61b56ab80cef58375a055 582 PANTHER PTHR30151 373 579 6.5E-130 T 19-04-2016 APA12_RS06250 e80a4af499f61b56ab80cef58375a055 582 SUPERFAMILY SSF161098 377 563 1.44E-10 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS06250 e80a4af499f61b56ab80cef58375a055 582 Gene3D G3DSA:1.10.3720.10 70 261 9.8E-23 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS06250 e80a4af499f61b56ab80cef58375a055 582 SUPERFAMILY SSF161098 69 263 4.19E-23 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS06250 e80a4af499f61b56ab80cef58375a055 582 Gene3D G3DSA:1.10.3720.10 380 568 5.3E-9 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS05765 7f26fc68941e621d427ef9360dfdc220 331 Gene3D G3DSA:1.10.530.10 81 138 5.7E-51 T 19-04-2016 APA12_RS05765 7f26fc68941e621d427ef9360dfdc220 331 Gene3D G3DSA:1.10.530.10 219 330 5.7E-51 T 19-04-2016 APA12_RS05765 7f26fc68941e621d427ef9360dfdc220 331 PANTHER PTHR30163:SF2 35 331 1.1E-100 T 19-04-2016 APA12_RS05765 7f26fc68941e621d427ef9360dfdc220 331 PANTHER PTHR30163 35 331 1.1E-100 T 19-04-2016 IPR011757 Lytic transglycosylase MltB APA12_RS05765 7f26fc68941e621d427ef9360dfdc220 331 Pfam PF13406 Transglycosylase SLT domain 39 328 8.7E-97 T 19-04-2016 IPR031304 Transglycosylase SLT domain 2 APA12_RS05765 7f26fc68941e621d427ef9360dfdc220 331 SUPERFAMILY SSF53955 25 330 9.0E-88 T 19-04-2016 IPR023346 Lysozyme-like domain APA12_RS05765 7f26fc68941e621d427ef9360dfdc220 331 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 37 330 6.4E-101 T 19-04-2016 IPR011970 Lytic murein transglycosylase APA12_RS12365 21c80b938476d04311ff7e98d664e5ff 472 Gene3D G3DSA:3.20.20.70 133 309 1.5E-5 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS12365 21c80b938476d04311ff7e98d664e5ff 472 Gene3D G3DSA:3.20.20.70 27 92 1.5E-5 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS12365 21c80b938476d04311ff7e98d664e5ff 472 PANTHER PTHR32332:SF18 3 50 1.9E-13 T 19-04-2016 APA12_RS12365 21c80b938476d04311ff7e98d664e5ff 472 PANTHER PTHR32332:SF18 76 311 1.9E-13 T 19-04-2016 APA12_RS12365 21c80b938476d04311ff7e98d664e5ff 472 SUPERFAMILY SSF51412 25 64 3.11E-7 T 19-04-2016 APA12_RS12365 21c80b938476d04311ff7e98d664e5ff 472 SUPERFAMILY SSF51412 95 311 3.11E-7 T 19-04-2016 APA12_RS12365 21c80b938476d04311ff7e98d664e5ff 472 PANTHER PTHR32332 3 50 1.9E-13 T 19-04-2016 APA12_RS12365 21c80b938476d04311ff7e98d664e5ff 472 PANTHER PTHR32332 76 311 1.9E-13 T 19-04-2016 APA12_RS10095 7c0293cff1a34d7ab2fbbadbcea6b396 243 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 169 190 - T 19-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 APA12_RS10095 7c0293cff1a34d7ab2fbbadbcea6b396 243 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 21 234 43.811 T 19-04-2016 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 APA12_RS10095 7c0293cff1a34d7ab2fbbadbcea6b396 243 Pfam PF01634 ATP phosphoribosyltransferase 73 230 7.0E-46 T 19-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 APA12_RS10095 7c0293cff1a34d7ab2fbbadbcea6b396 243 PANTHER PTHR21403 5 233 2.8E-70 T 19-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 APA12_RS10095 7c0293cff1a34d7ab2fbbadbcea6b396 243 PANTHER PTHR21403:SF3 5 233 2.8E-70 T 19-04-2016 APA12_RS10095 7c0293cff1a34d7ab2fbbadbcea6b396 243 Gene3D G3DSA:3.40.190.10 21 168 7.2E-35 T 19-04-2016 APA12_RS10095 7c0293cff1a34d7ab2fbbadbcea6b396 243 SUPERFAMILY SSF53850 20 233 4.34E-58 T 19-04-2016 APA12_RS10095 7c0293cff1a34d7ab2fbbadbcea6b396 243 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 23 210 4.4E-52 T 19-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 APA12_RS06375 f513a9472c0f88d3d01a927d735c7c71 560 SMART SM00387 457 555 3.2E-4 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS06375 f513a9472c0f88d3d01a927d735c7c71 560 SUPERFAMILY SSF55874 418 555 7.99E-15 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS06375 f513a9472c0f88d3d01a927d735c7c71 560 PANTHER PTHR24423 325 532 3.3E-23 T 19-04-2016 APA12_RS06375 f513a9472c0f88d3d01a927d735c7c71 560 Pfam PF13581 Histidine kinase-like ATPase domain 445 541 1.6E-7 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS06375 f513a9472c0f88d3d01a927d735c7c71 560 Pfam PF07568 Histidine kinase 360 433 9.8E-23 T 19-04-2016 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain APA12_RS06375 f513a9472c0f88d3d01a927d735c7c71 560 Gene3D G3DSA:3.30.565.10 423 553 2.9E-11 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS06375 f513a9472c0f88d3d01a927d735c7c71 560 PANTHER PTHR24423:SF472 325 532 3.3E-23 T 19-04-2016 APA12_RS12345 a14448fcbe8b3657058a87f1f73b1e87 163 SUPERFAMILY SSF50891 6 154 6.57E-51 T 19-04-2016 IPR029000 Cyclophilin-like domain APA12_RS12345 a14448fcbe8b3657058a87f1f73b1e87 163 Gene3D G3DSA:2.40.100.10 3 155 2.1E-49 T 19-04-2016 IPR029000 Cyclophilin-like domain APA12_RS12345 a14448fcbe8b3657058a87f1f73b1e87 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 49 61 2.0E-16 T 19-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APA12_RS12345 a14448fcbe8b3657058a87f1f73b1e87 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 2.0E-16 T 19-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APA12_RS12345 a14448fcbe8b3657058a87f1f73b1e87 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 23 38 2.0E-16 T 19-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APA12_RS12345 a14448fcbe8b3657058a87f1f73b1e87 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 105 117 2.0E-16 T 19-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APA12_RS12345 a14448fcbe8b3657058a87f1f73b1e87 163 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 155 4.8E-47 T 19-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APA12_RS12345 a14448fcbe8b3657058a87f1f73b1e87 163 PANTHER PTHR11071 8 136 1.1E-50 T 19-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 APA12_RS12345 a14448fcbe8b3657058a87f1f73b1e87 163 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 44 61 - T 19-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 APA12_RS00840 0bf87991b93973320f56486f0e4f360d 457 Gene3D G3DSA:1.10.443.10 250 418 6.5E-25 T 19-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APA12_RS00840 0bf87991b93973320f56486f0e4f360d 457 Pfam PF00589 Phage integrase family 276 418 4.2E-10 T 19-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APA12_RS00840 0bf87991b93973320f56486f0e4f360d 457 PANTHER PTHR30349 205 418 1.1E-14 T 19-04-2016 APA12_RS00840 0bf87991b93973320f56486f0e4f360d 457 PANTHER PTHR30349 133 178 1.1E-14 T 19-04-2016 APA12_RS00840 0bf87991b93973320f56486f0e4f360d 457 PANTHER PTHR30349:SF20 205 418 1.1E-14 T 19-04-2016 APA12_RS00840 0bf87991b93973320f56486f0e4f360d 457 PANTHER PTHR30349:SF20 133 178 1.1E-14 T 19-04-2016 APA12_RS00840 0bf87991b93973320f56486f0e4f360d 457 SUPERFAMILY SSF56349 205 418 7.65E-37 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APA12_RS00840 0bf87991b93973320f56486f0e4f360d 457 SUPERFAMILY SSF56349 134 176 7.65E-37 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APA12_RS04215 3a245f1da4a68d92c18ca0835596e2ab 287 Pfam PF14491 Protein of unknown function (DUF4435) 25 233 1.3E-14 T 19-04-2016 IPR029492 Domain of unknown function DUF4435 APA12_RS07340 8035f57b57873635d4cbee8d852b9780 267 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 9 255 9.3E-72 T 19-04-2016 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 APA12_RS07340 8035f57b57873635d4cbee8d852b9780 267 PANTHER PTHR36925 6 261 4.8E-61 T 19-04-2016 APA12_RS07340 8035f57b57873635d4cbee8d852b9780 267 TIGRFAM TIGR00715 precor6x_red: precorrin-6x reductase 9 256 1.6E-40 T 19-04-2016 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 APA12_RS08510 5de75018d0caf381cee07caab85c2689 446 Pfam PF01523 Putative modulator of DNA gyrase 24 315 3.9E-52 T 19-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APA12_RS08510 5de75018d0caf381cee07caab85c2689 446 SUPERFAMILY SSF111283 3 445 3.79E-118 T 19-04-2016 APA12_RS08510 5de75018d0caf381cee07caab85c2689 446 PANTHER PTHR30624 1 446 7.1E-115 T 19-04-2016 APA12_RS08510 5de75018d0caf381cee07caab85c2689 446 PANTHER PTHR30624:SF1 1 446 7.1E-115 T 19-04-2016 APA12_RS09380 3b446ae4d9c5e4a1990cb0fc21f91663 864 TIGRFAM TIGR03480 HpnN: hopanoid biosynthesis associated RND transporter like protein HpnN 8 860 2.7E-298 T 19-04-2016 IPR017841 Hopanoid biosynthesis associated RND transporter-like protein HpnN APA12_RS09380 3b446ae4d9c5e4a1990cb0fc21f91663 864 SUPERFAMILY SSF82866 236 432 3.53E-25 T 19-04-2016 APA12_RS09380 3b446ae4d9c5e4a1990cb0fc21f91663 864 SUPERFAMILY SSF82866 692 856 2.35E-22 T 19-04-2016 APA12_RS09380 3b446ae4d9c5e4a1990cb0fc21f91663 864 Pfam PF03176 MMPL family 681 856 1.1E-5 T 19-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 APA12_RS09380 3b446ae4d9c5e4a1990cb0fc21f91663 864 Pfam PF03176 MMPL family 233 429 6.2E-15 T 19-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 APA12_RS09380 3b446ae4d9c5e4a1990cb0fc21f91663 864 Gene3D G3DSA:1.20.1640.10 232 432 3.4E-24 T 19-04-2016 APA12_RS09380 3b446ae4d9c5e4a1990cb0fc21f91663 864 Gene3D G3DSA:1.20.1640.10 705 856 1.7E-14 T 19-04-2016 APA12_RS09380 3b446ae4d9c5e4a1990cb0fc21f91663 864 PANTHER PTHR33406 1 100 2.7E-45 T 19-04-2016 APA12_RS09380 3b446ae4d9c5e4a1990cb0fc21f91663 864 PANTHER PTHR33406 168 856 2.7E-45 T 19-04-2016 APA12_RS11390 e19c706eb3dda5c69bc16a187235216f 372 Gene3D G3DSA:3.40.640.10 78 276 1.2E-46 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APA12_RS11390 e19c706eb3dda5c69bc16a187235216f 372 PANTHER PTHR11751 33 369 9.4E-51 T 19-04-2016 APA12_RS11390 e19c706eb3dda5c69bc16a187235216f 372 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 232 245 - T 19-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 APA12_RS11390 e19c706eb3dda5c69bc16a187235216f 372 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 41 366 5.9E-95 T 19-04-2016 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443|UniPathway: UPA00148 APA12_RS11390 e19c706eb3dda5c69bc16a187235216f 372 PANTHER PTHR11751:SF3 33 369 9.4E-51 T 19-04-2016 APA12_RS11390 e19c706eb3dda5c69bc16a187235216f 372 Pfam PF00155 Aminotransferase class I and II 93 354 2.6E-36 T 19-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APA12_RS11390 e19c706eb3dda5c69bc16a187235216f 372 Gene3D G3DSA:3.90.1150.10 277 341 1.4E-4 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APA12_RS11390 e19c706eb3dda5c69bc16a187235216f 372 SUPERFAMILY SSF53383 38 369 1.03E-55 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APA12_RS01815 157283285302542bb6a6a450668848be 310 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 12 297 47.319 T 19-04-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 APA12_RS01815 157283285302542bb6a6a450668848be 310 Gene3D G3DSA:3.20.20.60 15 292 5.2E-92 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APA12_RS01815 157283285302542bb6a6a450668848be 310 Pfam PF13714 Phosphoenolpyruvate phosphomutase 18 259 6.3E-51 T 19-04-2016 APA12_RS01815 157283285302542bb6a6a450668848be 310 PANTHER PTHR21631:SF4 8 288 3.1E-129 T 19-04-2016 APA12_RS01815 157283285302542bb6a6a450668848be 310 ProSitePatterns PS00161 Isocitrate lyase signature. 127 132 - T 19-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 APA12_RS01815 157283285302542bb6a6a450668848be 310 PANTHER PTHR21631 8 288 3.1E-129 T 19-04-2016 APA12_RS01815 157283285302542bb6a6a450668848be 310 SUPERFAMILY SSF51621 14 293 2.83E-96 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APA12_RS01815 157283285302542bb6a6a450668848be 310 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 15 295 2.1E-128 T 19-04-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 APA12_RS09340 b6e071a548605c1637c38c8b14aca4b5 901 Gene3D G3DSA:3.40.50.300 198 296 5.5E-13 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS09340 b6e071a548605c1637c38c8b14aca4b5 901 Gene3D G3DSA:3.40.50.300 150 151 5.5E-13 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS09340 b6e071a548605c1637c38c8b14aca4b5 901 Gene3D G3DSA:3.40.50.300 3 79 5.5E-13 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS09340 b6e071a548605c1637c38c8b14aca4b5 901 Gene3D G3DSA:3.40.50.300 793 881 5.5E-13 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS09340 b6e071a548605c1637c38c8b14aca4b5 901 Pfam PF13476 AAA domain 23 259 2.7E-7 T 19-04-2016 APA12_RS09340 b6e071a548605c1637c38c8b14aca4b5 901 SUPERFAMILY SSF52540 786 891 9.85E-14 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS09340 b6e071a548605c1637c38c8b14aca4b5 901 SUPERFAMILY SSF52540 23 87 9.85E-14 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS09945 5b646d99b99d74ffd215b81d8f99341d 70 Pfam PF00403 Heavy-metal-associated domain 8 68 3.7E-19 T 19-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APA12_RS09945 5b646d99b99d74ffd215b81d8f99341d 70 Gene3D G3DSA:3.30.70.100 4 69 2.9E-23 T 19-04-2016 APA12_RS09945 5b646d99b99d74ffd215b81d8f99341d 70 PRINTS PR00946 Mercury scavenger protein signature 29 44 8.1E-12 T 19-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 APA12_RS09945 5b646d99b99d74ffd215b81d8f99341d 70 PRINTS PR00946 Mercury scavenger protein signature 13 29 8.1E-12 T 19-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 APA12_RS09945 5b646d99b99d74ffd215b81d8f99341d 70 PRINTS PR00946 Mercury scavenger protein signature 58 70 8.1E-12 T 19-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 APA12_RS09945 5b646d99b99d74ffd215b81d8f99341d 70 PRINTS PR00946 Mercury scavenger protein signature 2 13 8.1E-12 T 19-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 APA12_RS09945 5b646d99b99d74ffd215b81d8f99341d 70 PRINTS PR00946 Mercury scavenger protein signature 44 58 8.1E-12 T 19-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 APA12_RS09945 5b646d99b99d74ffd215b81d8f99341d 70 SUPERFAMILY SSF55008 4 69 6.68E-22 T 19-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APA12_RS09945 5b646d99b99d74ffd215b81d8f99341d 70 ProSitePatterns PS01047 Heavy-metal-associated domain. 10 39 - T 19-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 APA12_RS08885 4fc408ddafeb4b484701dacb0f66ef52 608 SUPERFAMILY SSF53448 168 364 7.12E-12 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS08885 4fc408ddafeb4b484701dacb0f66ef52 608 Pfam PF00535 Glycosyl transferase family 2 169 287 4.4E-6 T 19-04-2016 IPR001173 Glycosyltransferase 2-like APA12_RS06520 14c5a89595fb2cd3641e10dc59f5572a 110 PRINTS PR00189 Transthyretin signature 88 110 2.2E-5 T 19-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase APA12_RS06520 14c5a89595fb2cd3641e10dc59f5572a 110 PRINTS PR00189 Transthyretin signature 3 23 2.2E-5 T 19-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase APA12_RS06520 14c5a89595fb2cd3641e10dc59f5572a 110 ProSitePatterns PS00768 Transthyretin signature 1. 7 22 - T 19-04-2016 IPR023418 Transthyretin, thyroxine binding site APA12_RS06520 14c5a89595fb2cd3641e10dc59f5572a 110 Gene3D G3DSA:2.60.40.180 2 110 1.9E-31 T 19-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily APA12_RS06520 14c5a89595fb2cd3641e10dc59f5572a 110 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 2 110 7.1E-32 T 19-04-2016 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394 APA12_RS06520 14c5a89595fb2cd3641e10dc59f5572a 110 SUPERFAMILY SSF49472 1 110 2.35E-33 T 19-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily APA12_RS06520 14c5a89595fb2cd3641e10dc59f5572a 110 PANTHER PTHR10395 1 110 4.2E-38 T 19-04-2016 APA12_RS06520 14c5a89595fb2cd3641e10dc59f5572a 110 PANTHER PTHR10395:SF7 1 110 4.2E-38 T 19-04-2016 APA12_RS06520 14c5a89595fb2cd3641e10dc59f5572a 110 Pfam PF00576 HIUase/Transthyretin family 4 109 1.8E-30 T 19-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily APA12_RS04575 4d3de0e4df2350683e7afd30158dbfac 213 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 213 80.207 T 19-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 APA12_RS04575 4d3de0e4df2350683e7afd30158dbfac 213 SUPERFAMILY SSF55729 3 198 1.01E-73 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase APA12_RS04575 4d3de0e4df2350683e7afd30158dbfac 213 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 10 193 4.1E-53 T 19-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 APA12_RS04575 4d3de0e4df2350683e7afd30158dbfac 213 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 8 179 2.0E-64 T 19-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 APA12_RS04575 4d3de0e4df2350683e7afd30158dbfac 213 PANTHER PTHR30098 1 213 4.5E-69 T 19-04-2016 APA12_RS14040 d848c7a70af167cd08f8cc69b13799f4 90 SUPERFAMILY SSF46626 2 50 4.19E-7 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS14040 d848c7a70af167cd08f8cc69b13799f4 90 PANTHER PTHR35008 1 89 6.2E-21 T 19-04-2016 APA12_RS14040 d848c7a70af167cd08f8cc69b13799f4 90 Gene3D G3DSA:1.10.760.10 25 89 6.5E-4 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS14040 d848c7a70af167cd08f8cc69b13799f4 90 PANTHER PTHR35008:SF3 1 89 6.2E-21 T 19-04-2016 APA12_RS06785 42e5efa19e0e3f7088b7fdf8c0548093 128 SUPERFAMILY SSF54427 1 106 1.26E-15 T 19-04-2016 IPR032710 NTF2-like domain APA12_RS06785 42e5efa19e0e3f7088b7fdf8c0548093 128 Gene3D G3DSA:3.10.450.50 3 111 5.4E-9 T 19-04-2016 IPR032710 NTF2-like domain APA12_RS06785 42e5efa19e0e3f7088b7fdf8c0548093 128 Pfam PF12680 SnoaL-like domain 8 107 4.6E-11 T 19-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain APA12_RS11860 aa37de81448bcf2fd2c44e4a425450e0 318 SUPERFAMILY SSF56935 189 316 2.93E-7 T 19-04-2016 APA12_RS11860 aa37de81448bcf2fd2c44e4a425450e0 318 SUPERFAMILY SSF56935 22 158 2.93E-7 T 19-04-2016 APA12_RS08590 27ff9f8a83d2eb12794936a1f73cd084 390 PANTHER PTHR21716 37 381 9.2E-78 T 19-04-2016 IPR002549 Transmembrane protein TqsA-like APA12_RS08590 27ff9f8a83d2eb12794936a1f73cd084 390 Pfam PF01594 Domain of unknown function DUF20 51 375 1.0E-29 T 19-04-2016 IPR002549 Transmembrane protein TqsA-like APA12_RS08590 27ff9f8a83d2eb12794936a1f73cd084 390 PANTHER PTHR21716:SF12 37 381 9.2E-78 T 19-04-2016 APA12_RS10265 10cd21594846048ac84c8c5b893d82e4 66 Pfam PF10049 Protein of unknown function (DUF2283) 3 52 2.8E-17 T 19-04-2016 IPR019270 Protein of unknown function DUF2283 APA12_RS09825 818fa2f455658ca55cf85a8d04ef0b49 376 Gene3D G3DSA:3.40.630.10 81 219 6.3E-8 T 19-04-2016 APA12_RS09825 818fa2f455658ca55cf85a8d04ef0b49 376 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 88 307 3.5E-12 T 19-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 APA12_RS09825 818fa2f455658ca55cf85a8d04ef0b49 376 SUPERFAMILY SSF53187 55 367 4.63E-48 T 19-04-2016 APA12_RS10795 28376e1e80cf16209bc5d38bb01296c5 303 SUPERFAMILY SSF56281 3 301 4.53E-51 T 19-04-2016 IPR001279 Metallo-beta-lactamase APA12_RS10795 28376e1e80cf16209bc5d38bb01296c5 303 Hamap MF_00653 Coenzyme PQQ synthesis protein B [pqqB]. 1 303 141.55 T 19-04-2016 IPR011842 Coenzyme PQQ biosynthesis protein B GO:0006810|GO:0018189 UniPathway: UPA00539 APA12_RS10795 28376e1e80cf16209bc5d38bb01296c5 303 TIGRFAM TIGR02108 PQQ_syn_pqqB: coenzyme PQQ biosynthesis protein B 4 302 3.1E-122 T 19-04-2016 IPR011842 Coenzyme PQQ biosynthesis protein B GO:0006810|GO:0018189 UniPathway: UPA00539 APA12_RS10795 28376e1e80cf16209bc5d38bb01296c5 303 Pfam PF12706 Beta-lactamase superfamily domain 51 270 1.9E-49 T 19-04-2016 IPR001279 Metallo-beta-lactamase APA12_RS10795 28376e1e80cf16209bc5d38bb01296c5 303 Gene3D G3DSA:3.60.15.10 1 303 2.0E-99 T 19-04-2016 IPR001279 Metallo-beta-lactamase APA12_RS12405 3d2eff13ca358cdd66570eda44c61239 479 Gene3D G3DSA:3.40.50.2000 177 382 1.4E-15 T 19-04-2016 APA12_RS12405 3d2eff13ca358cdd66570eda44c61239 479 SUPERFAMILY SSF53756 17 405 3.23E-41 T 19-04-2016 APA12_RS12405 3d2eff13ca358cdd66570eda44c61239 479 Pfam PF00534 Glycosyl transferases group 1 211 382 1.0E-17 T 19-04-2016 IPR001296 Glycosyl transferase, family 1 APA12_RS12405 3d2eff13ca358cdd66570eda44c61239 479 Pfam PF12000 Gkycosyl transferase family 4 group 26 191 1.4E-56 T 19-04-2016 IPR022623 Domain of unknown function DUF3495 APA12_RS12405 3d2eff13ca358cdd66570eda44c61239 479 PANTHER PTHR12526 178 418 1.3E-25 T 19-04-2016 APA12_RS03650 a52dc701411cd5cf882d1e8916fc27af 372 PANTHER PTHR22939:SF79 87 363 1.0E-95 T 19-04-2016 APA12_RS03650 a52dc701411cd5cf882d1e8916fc27af 372 PANTHER PTHR22939:SF79 48 69 1.0E-95 T 19-04-2016 APA12_RS03650 a52dc701411cd5cf882d1e8916fc27af 372 SUPERFAMILY SSF50494 45 269 1.62E-61 T 19-04-2016 IPR009003 Peptidase S1, PA clan APA12_RS03650 a52dc701411cd5cf882d1e8916fc27af 372 Gene3D G3DSA:2.40.10.10 44 169 1.3E-31 T 19-04-2016 APA12_RS03650 a52dc701411cd5cf882d1e8916fc27af 372 Gene3D G3DSA:2.30.42.10 280 364 1.8E-19 T 19-04-2016 IPR001478 PDZ domain GO:0005515 APA12_RS03650 a52dc701411cd5cf882d1e8916fc27af 372 Gene3D G3DSA:2.40.10.10 170 279 1.2E-37 T 19-04-2016 APA12_RS03650 a52dc701411cd5cf882d1e8916fc27af 372 SMART SM00228 278 350 5.2E-10 T 19-04-2016 IPR001478 PDZ domain GO:0005515 APA12_RS03650 a52dc701411cd5cf882d1e8916fc27af 372 PRINTS PR00834 HtrA/DegQ protease family signature 232 249 4.5E-49 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APA12_RS03650 a52dc701411cd5cf882d1e8916fc27af 372 PRINTS PR00834 HtrA/DegQ protease family signature 114 126 4.5E-49 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APA12_RS03650 a52dc701411cd5cf882d1e8916fc27af 372 PRINTS PR00834 HtrA/DegQ protease family signature 210 227 4.5E-49 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APA12_RS03650 a52dc701411cd5cf882d1e8916fc27af 372 PRINTS PR00834 HtrA/DegQ protease family signature 135 155 4.5E-49 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APA12_RS03650 a52dc701411cd5cf882d1e8916fc27af 372 PRINTS PR00834 HtrA/DegQ protease family signature 176 200 4.5E-49 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APA12_RS03650 a52dc701411cd5cf882d1e8916fc27af 372 PRINTS PR00834 HtrA/DegQ protease family signature 308 320 4.5E-49 T 19-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APA12_RS03650 a52dc701411cd5cf882d1e8916fc27af 372 Pfam PF13180 PDZ domain 278 357 2.2E-15 T 19-04-2016 IPR001478 PDZ domain GO:0005515 APA12_RS03650 a52dc701411cd5cf882d1e8916fc27af 372 SUPERFAMILY SSF50156 276 362 5.39E-18 T 19-04-2016 IPR001478 PDZ domain GO:0005515 APA12_RS03650 a52dc701411cd5cf882d1e8916fc27af 372 Pfam PF13365 Trypsin-like peptidase domain 105 239 3.4E-30 T 19-04-2016 APA12_RS03650 a52dc701411cd5cf882d1e8916fc27af 372 PANTHER PTHR22939 87 363 1.0E-95 T 19-04-2016 APA12_RS03650 a52dc701411cd5cf882d1e8916fc27af 372 PANTHER PTHR22939 48 69 1.0E-95 T 19-04-2016 APA12_RS06675 43d18d1e398672ef5e6a02d2e8e3c9a6 446 Gene3D G3DSA:3.20.20.140 82 399 4.9E-58 T 19-04-2016 APA12_RS06675 43d18d1e398672ef5e6a02d2e8e3c9a6 446 PANTHER PTHR11271:SF42 332 424 7.3E-26 T 19-04-2016 APA12_RS06675 43d18d1e398672ef5e6a02d2e8e3c9a6 446 PANTHER PTHR11271:SF42 49 302 7.3E-26 T 19-04-2016 APA12_RS06675 43d18d1e398672ef5e6a02d2e8e3c9a6 446 PANTHER PTHR11271 332 424 7.3E-26 T 19-04-2016 APA12_RS06675 43d18d1e398672ef5e6a02d2e8e3c9a6 446 PANTHER PTHR11271 49 302 7.3E-26 T 19-04-2016 APA12_RS06675 43d18d1e398672ef5e6a02d2e8e3c9a6 446 Gene3D G3DSA:2.30.40.10 402 439 1.3E-21 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APA12_RS06675 43d18d1e398672ef5e6a02d2e8e3c9a6 446 Gene3D G3DSA:2.30.40.10 24 80 1.3E-21 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APA12_RS06675 43d18d1e398672ef5e6a02d2e8e3c9a6 446 Pfam PF01979 Amidohydrolase family 76 436 1.6E-26 T 19-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APA12_RS06675 43d18d1e398672ef5e6a02d2e8e3c9a6 446 SUPERFAMILY SSF51556 331 401 6.32E-50 T 19-04-2016 IPR032466 Metal-dependent hydrolase APA12_RS06675 43d18d1e398672ef5e6a02d2e8e3c9a6 446 SUPERFAMILY SSF51556 78 303 6.32E-50 T 19-04-2016 IPR032466 Metal-dependent hydrolase APA12_RS06675 43d18d1e398672ef5e6a02d2e8e3c9a6 446 SUPERFAMILY SSF51338 402 426 1.34E-13 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APA12_RS06675 43d18d1e398672ef5e6a02d2e8e3c9a6 446 SUPERFAMILY SSF51338 22 79 1.34E-13 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APA12_RS12790 fec8f3becf2ce53c25521eb267b1c6a2 495 PANTHER PTHR23500 25 494 1.1E-138 T 19-04-2016 APA12_RS12790 fec8f3becf2ce53c25521eb267b1c6a2 495 SUPERFAMILY SSF103473 17 460 3.4E-75 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS12790 fec8f3becf2ce53c25521eb267b1c6a2 495 Gene3D G3DSA:1.20.1250.20 30 215 1.5E-32 T 19-04-2016 APA12_RS12790 fec8f3becf2ce53c25521eb267b1c6a2 495 Gene3D G3DSA:1.20.1250.20 265 458 3.3E-19 T 19-04-2016 APA12_RS12790 fec8f3becf2ce53c25521eb267b1c6a2 495 ProSitePatterns PS00216 Sugar transport proteins signature 1. 82 99 - T 19-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APA12_RS12790 fec8f3becf2ce53c25521eb267b1c6a2 495 PRINTS PR00171 Sugar transporter signature 274 284 4.3E-15 T 19-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APA12_RS12790 fec8f3becf2ce53c25521eb267b1c6a2 495 PRINTS PR00171 Sugar transporter signature 364 385 4.3E-15 T 19-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APA12_RS12790 fec8f3becf2ce53c25521eb267b1c6a2 495 PRINTS PR00171 Sugar transporter signature 387 399 4.3E-15 T 19-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APA12_RS12790 fec8f3becf2ce53c25521eb267b1c6a2 495 PRINTS PR00171 Sugar transporter signature 119 138 4.3E-15 T 19-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APA12_RS12790 fec8f3becf2ce53c25521eb267b1c6a2 495 PRINTS PR00171 Sugar transporter signature 36 46 4.3E-15 T 19-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APA12_RS12790 fec8f3becf2ce53c25521eb267b1c6a2 495 Pfam PF00083 Sugar (and other) transporter 29 462 1.4E-89 T 19-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 APA12_RS12790 fec8f3becf2ce53c25521eb267b1c6a2 495 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 20 459 2.8E-90 T 19-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APA12_RS05425 1faac36862ca6a561dd41d7adca1561d 206 Pfam PF13462 Thioredoxin 38 202 1.8E-34 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS05425 1faac36862ca6a561dd41d7adca1561d 206 PANTHER PTHR13887 40 205 2.4E-19 T 19-04-2016 APA12_RS05425 1faac36862ca6a561dd41d7adca1561d 206 SUPERFAMILY SSF52833 35 202 4.26E-29 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS05425 1faac36862ca6a561dd41d7adca1561d 206 Gene3D G3DSA:3.40.30.10 38 205 4.1E-29 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS06070 11e8fd460607b67a38adee43dfb41ecf 734 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 17 730 8.6E-280 T 19-04-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APA12_RS06070 11e8fd460607b67a38adee43dfb41ecf 734 PANTHER PTHR10099:SF2 9 674 0.0 T 19-04-2016 APA12_RS06070 11e8fd460607b67a38adee43dfb41ecf 734 Pfam PF02769 AIR synthase related protein, C-terminal domain 574 702 3.7E-18 T 19-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APA12_RS06070 11e8fd460607b67a38adee43dfb41ecf 734 Pfam PF02769 AIR synthase related protein, C-terminal domain 201 354 9.7E-35 T 19-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APA12_RS06070 11e8fd460607b67a38adee43dfb41ecf 734 SUPERFAMILY SSF55326 393 565 8.5E-56 T 19-04-2016 APA12_RS06070 11e8fd460607b67a38adee43dfb41ecf 734 PIRSF PIRSF001587 2 734 1.1E-280 T 19-04-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APA12_RS06070 11e8fd460607b67a38adee43dfb41ecf 734 SUPERFAMILY SSF56042 198 420 8.52E-58 T 19-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APA12_RS06070 11e8fd460607b67a38adee43dfb41ecf 734 SUPERFAMILY SSF56042 571 732 1.27E-31 T 19-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APA12_RS06070 11e8fd460607b67a38adee43dfb41ecf 734 PANTHER PTHR10099 9 674 0.0 T 19-04-2016 APA12_RS06070 11e8fd460607b67a38adee43dfb41ecf 734 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 734 317.705 T 19-04-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APA12_RS06070 11e8fd460607b67a38adee43dfb41ecf 734 Gene3D G3DSA:3.30.1330.10 409 562 1.1E-51 T 19-04-2016 IPR016188 PurM-like, N-terminal domain APA12_RS06070 11e8fd460607b67a38adee43dfb41ecf 734 Gene3D G3DSA:3.30.1330.10 49 193 1.2E-48 T 19-04-2016 IPR016188 PurM-like, N-terminal domain APA12_RS06070 11e8fd460607b67a38adee43dfb41ecf 734 Pfam PF00586 AIR synthase related protein, N-terminal domain 86 187 8.9E-23 T 19-04-2016 IPR016188 PurM-like, N-terminal domain APA12_RS06070 11e8fd460607b67a38adee43dfb41ecf 734 Pfam PF00586 AIR synthase related protein, N-terminal domain 436 557 5.4E-22 T 19-04-2016 IPR016188 PurM-like, N-terminal domain APA12_RS06070 11e8fd460607b67a38adee43dfb41ecf 734 Gene3D G3DSA:3.90.650.10 247 355 1.1E-5 T 19-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APA12_RS06070 11e8fd460607b67a38adee43dfb41ecf 734 SUPERFAMILY SSF55326 14 195 2.39E-50 T 19-04-2016 APA12_RS00905 e1d43d69dc2c5efc775a71bc44a14fcf 353 Gene3D G3DSA:1.10.150.130 237 345 2.6E-4 T 19-04-2016 IPR023109 Integrase/recombinase, N-terminal APA12_RS00905 e1d43d69dc2c5efc775a71bc44a14fcf 353 SUPERFAMILY SSF56349 239 282 2.12E-6 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APA12_RS00905 e1d43d69dc2c5efc775a71bc44a14fcf 353 SUPERFAMILY SSF56349 310 345 2.12E-6 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APA12_RS11220 bda1b0fec1a8f89f8ea966ade5e4d424 441 SUPERFAMILY SSF103473 7 409 8.89E-52 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS11220 bda1b0fec1a8f89f8ea966ade5e4d424 441 PANTHER PTHR23505 1 411 1.3E-45 T 19-04-2016 APA12_RS11220 bda1b0fec1a8f89f8ea966ade5e4d424 441 Pfam PF07690 Major Facilitator Superfamily 14 369 1.1E-36 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APA12_RS11220 bda1b0fec1a8f89f8ea966ade5e4d424 441 Gene3D G3DSA:1.20.1250.20 221 414 3.7E-11 T 19-04-2016 APA12_RS11220 bda1b0fec1a8f89f8ea966ade5e4d424 441 Gene3D G3DSA:1.20.1250.20 9 199 2.8E-32 T 19-04-2016 APA12_RS14255 93b53ff58f01b8c8616efd504fc6a8a0 87 Pfam PF00294 pfkB family carbohydrate kinase 1 75 2.4E-6 T 19-04-2016 IPR011611 Carbohydrate kinase PfkB APA12_RS14255 93b53ff58f01b8c8616efd504fc6a8a0 87 Gene3D G3DSA:3.40.1190.20 1 87 6.6E-16 T 19-04-2016 IPR029056 Ribokinase-like APA12_RS14255 93b53ff58f01b8c8616efd504fc6a8a0 87 PANTHER PTHR10584 1 87 2.4E-13 T 19-04-2016 APA12_RS14255 93b53ff58f01b8c8616efd504fc6a8a0 87 SUPERFAMILY SSF53613 1 87 2.11E-14 T 19-04-2016 IPR029056 Ribokinase-like APA12_RS07905 176853815a1d1852c830ba9f9880e15a 154 Gene3D G3DSA:3.10.450.50 12 152 5.5E-72 T 19-04-2016 IPR032710 NTF2-like domain APA12_RS07905 176853815a1d1852c830ba9f9880e15a 154 SUPERFAMILY SSF54427 2 154 1.88E-76 T 19-04-2016 IPR032710 NTF2-like domain APA12_RS07905 176853815a1d1852c830ba9f9880e15a 154 PANTHER PTHR31757:SF0 1 154 1.1E-82 T 19-04-2016 APA12_RS07905 176853815a1d1852c830ba9f9880e15a 154 PANTHER PTHR31757 1 154 1.1E-82 T 19-04-2016 APA12_RS07905 176853815a1d1852c830ba9f9880e15a 154 Pfam PF07080 Protein of unknown function (DUF1348) 3 144 4.2E-70 T 19-04-2016 IPR009783 Protein of unknown function DUF1348 APA12_RS10770 d354b982e3e422a998942aa286ccca5c 122 PANTHER PTHR10072 7 121 1.2E-36 T 19-04-2016 APA12_RS10770 d354b982e3e422a998942aa286ccca5c 122 Pfam PF01521 Iron-sulphur cluster biosynthesis 8 116 6.4E-16 T 19-04-2016 IPR000361 FeS cluster biogenesis APA12_RS10770 d354b982e3e422a998942aa286ccca5c 122 Gene3D G3DSA:2.60.300.12 2 107 1.6E-26 T 19-04-2016 IPR000361 FeS cluster biogenesis APA12_RS10770 d354b982e3e422a998942aa286ccca5c 122 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 8 121 4.7E-30 T 19-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 APA12_RS10770 d354b982e3e422a998942aa286ccca5c 122 SUPERFAMILY SSF89360 7 110 1.39E-21 T 19-04-2016 IPR000361 FeS cluster biogenesis APA12_RS10770 d354b982e3e422a998942aa286ccca5c 122 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 102 119 - T 19-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site APA12_RS12025 86821ecd4002136022f736f6d78b6fb8 307 Gene3D G3DSA:3.40.190.10 172 269 3.1E-22 T 19-04-2016 APA12_RS12025 86821ecd4002136022f736f6d78b6fb8 307 PANTHER PTHR30118:SF5 1 307 7.0E-82 T 19-04-2016 APA12_RS12025 86821ecd4002136022f736f6d78b6fb8 307 Pfam PF03466 LysR substrate binding domain 96 295 1.1E-18 T 19-04-2016 IPR005119 LysR, substrate-binding APA12_RS12025 86821ecd4002136022f736f6d78b6fb8 307 SUPERFAMILY SSF53850 92 296 6.33E-33 T 19-04-2016 APA12_RS12025 86821ecd4002136022f736f6d78b6fb8 307 Gene3D G3DSA:1.10.10.10 2 83 7.7E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS12025 86821ecd4002136022f736f6d78b6fb8 307 Gene3D G3DSA:3.40.190.10 273 301 1.7E-19 T 19-04-2016 APA12_RS12025 86821ecd4002136022f736f6d78b6fb8 307 Gene3D G3DSA:3.40.190.10 94 171 1.7E-19 T 19-04-2016 APA12_RS12025 86821ecd4002136022f736f6d78b6fb8 307 PANTHER PTHR30118 1 307 7.0E-82 T 19-04-2016 APA12_RS12025 86821ecd4002136022f736f6d78b6fb8 307 SUPERFAMILY SSF46785 3 82 1.48E-14 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS12025 86821ecd4002136022f736f6d78b6fb8 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 1.5E-13 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS00720 9e05cae41b14cc4240bf17dc10e87352 494 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 23 489 1.1E-108 T 19-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 APA12_RS00720 9e05cae41b14cc4240bf17dc10e87352 494 Gene3D G3DSA:1.20.1600.10 63 101 2.9E-96 T 19-04-2016 APA12_RS00720 9e05cae41b14cc4240bf17dc10e87352 494 Gene3D G3DSA:1.20.1600.10 166 338 2.9E-96 T 19-04-2016 APA12_RS00720 9e05cae41b14cc4240bf17dc10e87352 494 Gene3D G3DSA:1.20.1600.10 376 490 2.9E-96 T 19-04-2016 APA12_RS00720 9e05cae41b14cc4240bf17dc10e87352 494 PANTHER PTHR30203 1 492 1.9E-128 T 19-04-2016 APA12_RS00720 9e05cae41b14cc4240bf17dc10e87352 494 Pfam PF02321 Outer membrane efflux protein 307 487 1.0E-22 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APA12_RS00720 9e05cae41b14cc4240bf17dc10e87352 494 Pfam PF02321 Outer membrane efflux protein 75 278 2.8E-25 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APA12_RS00720 9e05cae41b14cc4240bf17dc10e87352 494 Gene3D G3DSA:2.20.200.10 142 165 2.0E-14 T 19-04-2016 APA12_RS00720 9e05cae41b14cc4240bf17dc10e87352 494 Gene3D G3DSA:2.20.200.10 339 374 2.0E-14 T 19-04-2016 APA12_RS00720 9e05cae41b14cc4240bf17dc10e87352 494 SUPERFAMILY SSF56954 11 490 3.92E-101 T 19-04-2016 APA12_RS00720 9e05cae41b14cc4240bf17dc10e87352 494 PANTHER PTHR30203:SF15 1 492 1.9E-128 T 19-04-2016 APA12_RS05450 ef35aa526f1336d52ab0cc39ab8cc804 363 SMART SM00563 113 243 1.5E-24 T 19-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APA12_RS05450 ef35aa526f1336d52ab0cc39ab8cc804 363 Pfam PF01553 Acyltransferase 108 210 4.0E-20 T 19-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APA12_RS05450 ef35aa526f1336d52ab0cc39ab8cc804 363 PANTHER PTHR10434 73 209 1.5E-22 T 19-04-2016 APA12_RS05450 ef35aa526f1336d52ab0cc39ab8cc804 363 SUPERFAMILY SSF69593 54 304 9.15E-25 T 19-04-2016 APA12_RS05450 ef35aa526f1336d52ab0cc39ab8cc804 363 Gene3D G3DSA:3.40.1130.10 103 227 1.4E-8 T 19-04-2016 APA12_RS08620 a543b51a0c5c8f26e8f4a4daab3871e1 67 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 2.6E-27 T 19-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 APA12_RS08620 a543b51a0c5c8f26e8f4a4daab3871e1 67 PANTHER PTHR21026 1 56 5.2E-24 T 19-04-2016 APA12_RS08620 a543b51a0c5c8f26e8f4a4daab3871e1 67 SUPERFAMILY SSF57829 1 55 1.46E-23 T 19-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 APA12_RS08620 a543b51a0c5c8f26e8f4a4daab3871e1 67 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 55 20.986 T 19-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 APA12_RS08620 a543b51a0c5c8f26e8f4a4daab3871e1 67 Pfam PF01783 Ribosomal L32p protein family 2 56 2.8E-28 T 19-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 APA12_RS00980 73ad41282ac90b9af8539b4baef3f649 656 Gene3D G3DSA:1.50.10.20 311 644 4.9E-116 T 19-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid APA12_RS00980 73ad41282ac90b9af8539b4baef3f649 656 Pfam PF13249 Squalene-hopene cyclase N-terminal domain 24 312 1.4E-110 T 19-04-2016 IPR032697 Squalene cyclase, N-terminal APA12_RS00980 73ad41282ac90b9af8539b4baef3f649 656 TIGRFAM TIGR01787 squalene_cyclas: squalene/oxidosqualene cyclases 22 643 2.4E-183 T 19-04-2016 IPR018333 Squalene cyclase GO:0016866 APA12_RS00980 73ad41282ac90b9af8539b4baef3f649 656 TIGRFAM TIGR01507 hopene_cyclase: squalene-hopene cyclase 18 646 2.3E-235 T 19-04-2016 IPR006400 Squalene hopene cyclase GO:0016866|GO:0019746 KEGG: 00030+4.2.1.12|KEGG: 00909+4.2.1.129+5.4.99.17|MetaCyc: PWY-6098|MetaCyc: PWY-7072|UniPathway: UPA00337 APA12_RS00980 73ad41282ac90b9af8539b4baef3f649 656 SUPERFAMILY SSF48239 47 316 4.71E-69 T 19-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid APA12_RS00980 73ad41282ac90b9af8539b4baef3f649 656 Gene3D G3DSA:1.50.10.20 44 310 1.4E-56 T 19-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid APA12_RS00980 73ad41282ac90b9af8539b4baef3f649 656 PANTHER PTHR11764 10 651 3.7E-268 T 19-04-2016 APA12_RS00980 73ad41282ac90b9af8539b4baef3f649 656 SUPERFAMILY SSF48239 316 643 4.55E-106 T 19-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid APA12_RS00980 73ad41282ac90b9af8539b4baef3f649 656 SUPERFAMILY SSF48239 248 271 4.55E-106 T 19-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid APA12_RS00980 73ad41282ac90b9af8539b4baef3f649 656 PANTHER PTHR11764:SF12 10 651 3.7E-268 T 19-04-2016 APA12_RS00980 73ad41282ac90b9af8539b4baef3f649 656 Pfam PF13243 Squalene-hopene cyclase C-terminal domain 320 643 7.0E-142 T 19-04-2016 IPR032696 Squalene cyclase, C-terminal APA12_RS08400 f33f8f54afbcb871b586fb2785d029e8 162 PANTHER PTHR13696:SF62 65 160 3.0E-23 T 19-04-2016 APA12_RS08400 f33f8f54afbcb871b586fb2785d029e8 162 PANTHER PTHR13696 65 160 3.0E-23 T 19-04-2016 APA12_RS08400 f33f8f54afbcb871b586fb2785d029e8 162 SUPERFAMILY SSF117916 64 160 2.68E-32 T 19-04-2016 APA12_RS08400 f33f8f54afbcb871b586fb2785d029e8 162 Pfam PF01883 Domain of unknown function DUF59 66 140 6.7E-21 T 19-04-2016 IPR002744 Domain of unknown function DUF59 APA12_RS08400 f33f8f54afbcb871b586fb2785d029e8 162 TIGRFAM TIGR02945 SUF_assoc: FeS assembly SUF system protein 66 162 1.9E-45 T 19-04-2016 IPR014291 SUF system FeS cluster assembly associated APA12_RS06085 424bfcc9bb24f7eada24e98ea7d60ce4 80 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 1 79 8.2E-28 T 19-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APA12_RS06085 424bfcc9bb24f7eada24e98ea7d60ce4 80 PANTHER PTHR34696 1 80 3.5E-28 T 19-04-2016 APA12_RS06085 424bfcc9bb24f7eada24e98ea7d60ce4 80 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 1 78 22.007 T 19-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APA12_RS06085 424bfcc9bb24f7eada24e98ea7d60ce4 80 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 2 78 9.8E-32 T 19-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APA12_RS06085 424bfcc9bb24f7eada24e98ea7d60ce4 80 Gene3D G3DSA:3.30.1280.10 1 80 7.8E-34 T 19-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APA12_RS06085 424bfcc9bb24f7eada24e98ea7d60ce4 80 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 9 78 1.0E-15 T 19-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APA12_RS06085 424bfcc9bb24f7eada24e98ea7d60ce4 80 SUPERFAMILY SSF82697 1 78 3.49E-28 T 19-04-2016 APA12_RS06995 f603feef312d7f288f1fe8b50a0d3337 319 Gene3D G3DSA:1.10.10.60 13 61 1.6E-6 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS06995 f603feef312d7f288f1fe8b50a0d3337 319 Pfam PF00665 Integrase core domain 133 252 2.5E-22 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APA12_RS06995 f603feef312d7f288f1fe8b50a0d3337 319 SUPERFAMILY SSF53098 130 301 2.91E-38 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS06995 f603feef312d7f288f1fe8b50a0d3337 319 PANTHER PTHR24559 136 293 1.6E-14 T 19-04-2016 APA12_RS06995 f603feef312d7f288f1fe8b50a0d3337 319 Gene3D G3DSA:3.30.420.10 131 302 1.4E-38 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS11705 680e0d9b67d007bab658e9ac51a10562 116 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 9 114 8.5E-34 T 19-04-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 APA12_RS11705 680e0d9b67d007bab658e9ac51a10562 116 PANTHER PTHR36116:SF1 6 114 4.0E-42 T 19-04-2016 APA12_RS11705 680e0d9b67d007bab658e9ac51a10562 116 SUPERFAMILY SSF103481 15 114 1.96E-9 T 19-04-2016 APA12_RS11705 680e0d9b67d007bab658e9ac51a10562 116 PANTHER PTHR36116 6 114 4.0E-42 T 19-04-2016 APA12_RS11705 680e0d9b67d007bab658e9ac51a10562 116 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 9 114 23.168 T 19-04-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 APA12_RS08115 84b6ed0d10a8b5f64150c9b7d337608c 588 Gene3D G3DSA:3.40.50.980 198 363 5.2E-28 T 19-04-2016 APA12_RS08115 84b6ed0d10a8b5f64150c9b7d337608c 588 Gene3D G3DSA:2.30.38.10 397 470 3.8E-20 T 19-04-2016 APA12_RS08115 84b6ed0d10a8b5f64150c9b7d337608c 588 Gene3D G3DSA:3.30.300.30 471 573 2.6E-15 T 19-04-2016 APA12_RS08115 84b6ed0d10a8b5f64150c9b7d337608c 588 Gene3D G3DSA:3.40.50.980 60 197 3.2E-16 T 19-04-2016 APA12_RS08115 84b6ed0d10a8b5f64150c9b7d337608c 588 PANTHER PTHR22754 75 579 6.1E-99 T 19-04-2016 APA12_RS08115 84b6ed0d10a8b5f64150c9b7d337608c 588 SUPERFAMILY SSF56801 59 367 7.2E-92 T 19-04-2016 APA12_RS08115 84b6ed0d10a8b5f64150c9b7d337608c 588 SUPERFAMILY SSF56801 393 579 7.2E-92 T 19-04-2016 APA12_RS08115 84b6ed0d10a8b5f64150c9b7d337608c 588 Pfam PF00501 AMP-binding enzyme 62 477 3.5E-65 T 19-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APA12_RS05785 b79e29100feb52fd4796af88bb258969 314 Gene3D G3DSA:1.10.8.60 163 213 8.6E-4 T 19-04-2016 APA12_RS05785 b79e29100feb52fd4796af88bb258969 314 Pfam PF13177 DNA polymerase III, delta subunit 14 174 1.3E-36 T 19-04-2016 APA12_RS05785 b79e29100feb52fd4796af88bb258969 314 PANTHER PTHR11669 10 213 8.0E-52 T 19-04-2016 APA12_RS05785 b79e29100feb52fd4796af88bb258969 314 SUPERFAMILY SSF52540 11 213 6.39E-45 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05785 b79e29100feb52fd4796af88bb258969 314 PANTHER PTHR11669:SF8 10 213 8.0E-52 T 19-04-2016 APA12_RS05785 b79e29100feb52fd4796af88bb258969 314 Gene3D G3DSA:3.40.50.300 10 162 1.3E-43 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS12300 fdb9acf0e61763c782272b25d6e6214b 257 SUPERFAMILY SSF54001 75 190 4.32E-16 T 19-04-2016 APA12_RS12300 fdb9acf0e61763c782272b25d6e6214b 257 Pfam PF05257 CHAP domain 84 156 5.8E-9 T 19-04-2016 IPR007921 CHAP domain APA12_RS11835 97f45d49872d3e36ddd8b0bbdb2ccdf0 534 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 240 530 1.0E-120 T 19-04-2016 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type APA12_RS11835 97f45d49872d3e36ddd8b0bbdb2ccdf0 534 SUPERFAMILY SSF48371 122 231 7.57E-6 T 19-04-2016 IPR016024 Armadillo-type fold GO:0005488 APA12_RS11835 97f45d49872d3e36ddd8b0bbdb2ccdf0 534 Gene3D G3DSA:1.25.10.10 125 230 9.7E-5 T 19-04-2016 IPR011989 Armadillo-like helical APA12_RS11835 97f45d49872d3e36ddd8b0bbdb2ccdf0 534 PANTHER PTHR11795 76 533 7.7E-144 T 19-04-2016 APA12_RS11835 97f45d49872d3e36ddd8b0bbdb2ccdf0 534 PANTHER PTHR11795:SF349 76 533 7.7E-144 T 19-04-2016 APA12_RS11835 97f45d49872d3e36ddd8b0bbdb2ccdf0 534 Pfam PF02653 Branched-chain amino acid transport system / permease component 242 502 1.9E-46 T 19-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APA12_RS08960 15f8b591fa2d3fc7be1d1aaa37435a1e 289 Gene3D G3DSA:1.10.3130.10 31 163 6.3E-39 T 19-04-2016 APA12_RS08960 15f8b591fa2d3fc7be1d1aaa37435a1e 289 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 223 251 - T 19-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APA12_RS08960 15f8b591fa2d3fc7be1d1aaa37435a1e 289 SMART SM00971 32 134 9.6E-40 T 19-04-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 APA12_RS08960 15f8b591fa2d3fc7be1d1aaa37435a1e 289 Gene3D G3DSA:2.160.10.10 164 272 1.0E-31 T 19-04-2016 APA12_RS08960 15f8b591fa2d3fc7be1d1aaa37435a1e 289 SUPERFAMILY SSF51161 58 268 2.22E-57 T 19-04-2016 IPR011004 Trimeric LpxA-like APA12_RS08960 15f8b591fa2d3fc7be1d1aaa37435a1e 289 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 104 263 6.9E-69 T 19-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 APA12_RS08960 15f8b591fa2d3fc7be1d1aaa37435a1e 289 PANTHER PTHR23416 28 289 1.5E-109 T 19-04-2016 APA12_RS08960 15f8b591fa2d3fc7be1d1aaa37435a1e 289 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 215 247 4.6E-8 T 19-04-2016 IPR001451 Hexapeptide repeat APA12_RS08960 15f8b591fa2d3fc7be1d1aaa37435a1e 289 Pfam PF06426 Serine acetyltransferase, N-terminal 32 134 1.4E-29 T 19-04-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 APA12_RS08960 15f8b591fa2d3fc7be1d1aaa37435a1e 289 PANTHER PTHR23416:SF2 28 289 1.5E-109 T 19-04-2016 APA12_RS02160 8b9c70352d961bc62b64b096607c4a87 310 Gene3D G3DSA:3.40.50.10490 12 252 5.9E-63 T 19-04-2016 APA12_RS02160 8b9c70352d961bc62b64b096607c4a87 310 PANTHER PTHR10088 12 297 3.6E-80 T 19-04-2016 APA12_RS02160 8b9c70352d961bc62b64b096607c4a87 310 SUPERFAMILY SSF53697 12 251 1.31E-54 T 19-04-2016 APA12_RS02160 8b9c70352d961bc62b64b096607c4a87 310 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 188 205 - T 19-04-2016 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 APA12_RS03880 eb1af42e076073926c8b35fbf366647b 131 Pfam PF12200 Domain of unknown function (DUF3597) 3 128 5.5E-51 T 19-04-2016 IPR022016 Domain of unknown function DUF3597 APA12_RS03880 eb1af42e076073926c8b35fbf366647b 131 SUPERFAMILY SSF158634 1 131 9.42E-47 T 19-04-2016 APA12_RS03710 6993d9f07940316fe47e94e5a7b2a07b 234 SUPERFAMILY SSF56784 7 218 3.82E-50 T 19-04-2016 IPR023214 HAD-like domain APA12_RS03710 6993d9f07940316fe47e94e5a7b2a07b 234 Hamap MF_01681 Enolase-phosphatase E1 [mtnC]. 7 224 37.893 T 19-04-2016 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|UniPathway: UPA00904|UniPathway: UPA00904 APA12_RS03710 6993d9f07940316fe47e94e5a7b2a07b 234 Pfam PF00702 haloacid dehalogenase-like hydrolase 10 196 1.4E-7 T 19-04-2016 APA12_RS03710 6993d9f07940316fe47e94e5a7b2a07b 234 PANTHER PTHR20371 6 205 3.2E-75 T 19-04-2016 APA12_RS03710 6993d9f07940316fe47e94e5a7b2a07b 234 TIGRFAM TIGR01691 enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 9 222 1.8E-81 T 19-04-2016 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|UniPathway: UPA00904|UniPathway: UPA00904 APA12_RS03710 6993d9f07940316fe47e94e5a7b2a07b 234 Gene3D G3DSA:3.40.50.1000 8 211 3.9E-23 T 19-04-2016 IPR023214 HAD-like domain APA12_RS06115 e98dce77ee506a88e75c2fa1e635c7fd 170 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 23 169 1.0E-45 T 19-04-2016 IPR008136 CinA, C-terminal APA12_RS06115 e98dce77ee506a88e75c2fa1e635c7fd 170 PANTHER PTHR13939 31 169 2.7E-55 T 19-04-2016 APA12_RS06115 e98dce77ee506a88e75c2fa1e635c7fd 170 Gene3D G3DSA:3.90.950.20 16 169 7.2E-54 T 19-04-2016 IPR008136 CinA, C-terminal APA12_RS06115 e98dce77ee506a88e75c2fa1e635c7fd 170 SUPERFAMILY SSF142433 14 169 6.15E-50 T 19-04-2016 IPR008136 CinA, C-terminal APA12_RS06115 e98dce77ee506a88e75c2fa1e635c7fd 170 Pfam PF02464 Competence-damaged protein 17 168 4.2E-53 T 19-04-2016 IPR008136 CinA, C-terminal APA12_RS09135 5a740f9b6b34b9a3590df08cb6911083 113 Pfam PF13586 Transposase DDE domain 29 112 2.5E-20 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS09135 5a740f9b6b34b9a3590df08cb6911083 113 PANTHER PTHR30007 1 112 1.6E-27 T 19-04-2016 APA12_RS09135 5a740f9b6b34b9a3590df08cb6911083 113 PANTHER PTHR30007:SF22 1 112 1.6E-27 T 19-04-2016 APA12_RS07745 5e0db6ff34266747105307eef4283c73 758 Gene3D G3DSA:2.170.130.10 74 216 1.0E-19 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS07745 5e0db6ff34266747105307eef4283c73 758 Gene3D G3DSA:2.40.170.20 222 756 3.0E-92 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS07745 5e0db6ff34266747105307eef4283c73 758 Pfam PF00593 TonB dependent receptor 519 755 4.2E-20 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS07745 5e0db6ff34266747105307eef4283c73 758 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 107 756 1.9E-90 T 19-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 APA12_RS07745 5e0db6ff34266747105307eef4283c73 758 PANTHER PTHR32552:SF14 97 758 7.8E-141 T 19-04-2016 IPR030149 TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 APA12_RS07745 5e0db6ff34266747105307eef4283c73 758 PANTHER PTHR32552:SF14 52 72 7.8E-141 T 19-04-2016 IPR030149 TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 APA12_RS07745 5e0db6ff34266747105307eef4283c73 758 Pfam PF07715 TonB-dependent Receptor Plug Domain 107 202 3.5E-10 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS07745 5e0db6ff34266747105307eef4283c73 758 PANTHER PTHR32552 97 758 7.8E-141 T 19-04-2016 APA12_RS07745 5e0db6ff34266747105307eef4283c73 758 PANTHER PTHR32552 52 72 7.8E-141 T 19-04-2016 APA12_RS07745 5e0db6ff34266747105307eef4283c73 758 SUPERFAMILY SSF56935 69 756 4.89E-88 T 19-04-2016 APA12_RS04630 8b4c9a6bc12e0d6dde18a1f30077ff48 243 SUPERFAMILY SSF52172 18 198 1.05E-35 T 19-04-2016 IPR011006 CheY-like superfamily APA12_RS04630 8b4c9a6bc12e0d6dde18a1f30077ff48 243 SMART SM00862 164 239 4.4E-25 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APA12_RS04630 8b4c9a6bc12e0d6dde18a1f30077ff48 243 PANTHER PTHR26402:SF600 20 240 1.7E-85 T 19-04-2016 APA12_RS04630 8b4c9a6bc12e0d6dde18a1f30077ff48 243 Pfam PF00072 Response regulator receiver domain 22 132 2.1E-21 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS04630 8b4c9a6bc12e0d6dde18a1f30077ff48 243 SMART SM00448 20 131 7.8E-30 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS04630 8b4c9a6bc12e0d6dde18a1f30077ff48 243 Pfam PF00486 Transcriptional regulatory protein, C terminal 164 239 2.8E-24 T 19-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APA12_RS04630 8b4c9a6bc12e0d6dde18a1f30077ff48 243 Gene3D G3DSA:3.40.50.2300 17 141 5.1E-33 T 19-04-2016 APA12_RS04630 8b4c9a6bc12e0d6dde18a1f30077ff48 243 Gene3D G3DSA:1.10.10.10 142 242 1.8E-33 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS04630 8b4c9a6bc12e0d6dde18a1f30077ff48 243 PANTHER PTHR26402 20 240 1.7E-85 T 19-04-2016 APA12_RS05510 8920c6a24ac27efc1243c33ca13c6feb 230 Pfam PF12697 Alpha/beta hydrolase family 7 217 1.6E-6 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APA12_RS05510 8920c6a24ac27efc1243c33ca13c6feb 230 Gene3D G3DSA:3.40.50.1820 7 221 4.8E-7 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS05510 8920c6a24ac27efc1243c33ca13c6feb 230 SUPERFAMILY SSF53474 7 220 1.56E-11 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS00420 8fc84434e950f0b730103c91ae6d680e 744 PANTHER PTHR30509 34 288 6.8E-46 T 19-04-2016 APA12_RS00420 8fc84434e950f0b730103c91ae6d680e 744 PANTHER PTHR30509 363 707 6.8E-46 T 19-04-2016 APA12_RS00420 8fc84434e950f0b730103c91ae6d680e 744 PANTHER PTHR30509:SF1 363 707 6.8E-46 T 19-04-2016 APA12_RS00420 8fc84434e950f0b730103c91ae6d680e 744 Pfam PF04632 Fusaric acid resistance protein family 47 731 4.9E-132 T 19-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 APA12_RS00420 8fc84434e950f0b730103c91ae6d680e 744 PANTHER PTHR30509:SF1 34 288 6.8E-46 T 19-04-2016 APA12_RS00760 1c60028c0b4e5a87a5e15b8194559719 1051 Gene3D G3DSA:2.170.16.10 705 849 1.8E-4 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS00760 1c60028c0b4e5a87a5e15b8194559719 1051 SUPERFAMILY SSF51294 706 843 3.4E-9 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS00760 1c60028c0b4e5a87a5e15b8194559719 1051 Pfam PF13403 Hint domain 705 846 2.3E-43 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS08405 1c4f30cc03e8c8d939cd9cd8835cb60a 150 Gene3D G3DSA:3.90.1010.10 11 147 7.3E-27 T 19-04-2016 APA12_RS08405 1c4f30cc03e8c8d939cd9cd8835cb60a 150 SUPERFAMILY SSF82649 7 147 5.49E-35 T 19-04-2016 APA12_RS08405 1c4f30cc03e8c8d939cd9cd8835cb60a 150 Pfam PF01592 NifU-like N terminal domain 12 115 6.8E-15 T 19-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 APA12_RS08405 1c4f30cc03e8c8d939cd9cd8835cb60a 150 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 9 145 2.8E-33 T 19-04-2016 APA12_RS11910 ad7ed635da9218ce198dfea86277067d 114 Pfam PF00699 Urease beta subunit 14 110 8.0E-43 T 19-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APA12_RS11910 ad7ed635da9218ce198dfea86277067d 114 Gene3D G3DSA:2.10.150.10 13 113 1.8E-47 T 19-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APA12_RS11910 ad7ed635da9218ce198dfea86277067d 114 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 13 113 6.8E-41 T 19-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APA12_RS11910 ad7ed635da9218ce198dfea86277067d 114 PANTHER PTHR33569 6 113 1.4E-54 T 19-04-2016 APA12_RS11910 ad7ed635da9218ce198dfea86277067d 114 Hamap MF_01954 Urease subunit beta [ureB]. 12 112 30.555 T 19-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APA12_RS11910 ad7ed635da9218ce198dfea86277067d 114 SUPERFAMILY SSF51278 13 113 7.98E-45 T 19-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APA12_RS11910 ad7ed635da9218ce198dfea86277067d 114 PANTHER PTHR33569:SF1 6 113 1.4E-54 T 19-04-2016 APA12_RS03185 a869227abe1ba828f83f1fae8d552dd2 112 SUPERFAMILY SSF54913 1 112 3.89E-46 T 19-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta APA12_RS03185 a869227abe1ba828f83f1fae8d552dd2 112 PIRSF PIRSF039144 1 112 1.9E-54 T 19-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APA12_RS03185 a869227abe1ba828f83f1fae8d552dd2 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 19-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 APA12_RS03185 a869227abe1ba828f83f1fae8d552dd2 112 PANTHER PTHR30115 1 112 4.8E-64 T 19-04-2016 APA12_RS03185 a869227abe1ba828f83f1fae8d552dd2 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 4.6E-42 T 19-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APA12_RS03185 a869227abe1ba828f83f1fae8d552dd2 112 SMART SM00938 4 105 5.0E-67 T 19-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APA12_RS03185 a869227abe1ba828f83f1fae8d552dd2 112 Gene3D G3DSA:3.30.70.120 1 112 2.2E-51 T 19-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal APA12_RS03185 a869227abe1ba828f83f1fae8d552dd2 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 19-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 APA12_RS03185 a869227abe1ba828f83f1fae8d552dd2 112 PRINTS PR00340 P-II protein signature 23 41 9.1E-42 T 19-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APA12_RS03185 a869227abe1ba828f83f1fae8d552dd2 112 PRINTS PR00340 P-II protein signature 52 75 9.1E-42 T 19-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APA12_RS03185 a869227abe1ba828f83f1fae8d552dd2 112 PRINTS PR00340 P-II protein signature 83 103 9.1E-42 T 19-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APA12_RS03185 a869227abe1ba828f83f1fae8d552dd2 112 PRINTS PR00340 P-II protein signature 2 17 9.1E-42 T 19-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APA12_RS05125 50eedf507621faa6a1f2ade927f2a7bc 288 Pfam PF00756 Putative esterase 35 279 3.2E-50 T 19-04-2016 IPR000801 Putative esterase APA12_RS05125 50eedf507621faa6a1f2ade927f2a7bc 288 Gene3D G3DSA:3.40.50.1820 10 286 1.2E-65 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS05125 50eedf507621faa6a1f2ade927f2a7bc 288 PANTHER PTHR10061 7 288 6.9E-139 T 19-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 APA12_RS05125 50eedf507621faa6a1f2ade927f2a7bc 288 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 13 285 2.1E-124 T 19-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 APA12_RS05125 50eedf507621faa6a1f2ade927f2a7bc 288 SUPERFAMILY SSF53474 9 286 9.76E-73 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS04710 ab2071ba18ef6779e35f79882df483ac 204 SUPERFAMILY SSF52166 1 203 2.75E-66 T 19-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 APA12_RS04710 ab2071ba18ef6779e35f79882df483ac 204 PANTHER PTHR10746 1 203 1.6E-79 T 19-04-2016 IPR013005 50S ribosomal protein uL4 APA12_RS04710 ab2071ba18ef6779e35f79882df483ac 204 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 17 200 6.9E-67 T 19-04-2016 IPR013005 50S ribosomal protein uL4 APA12_RS04710 ab2071ba18ef6779e35f79882df483ac 204 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 204 30.397 T 19-04-2016 IPR013005 50S ribosomal protein uL4 APA12_RS04710 ab2071ba18ef6779e35f79882df483ac 204 Gene3D G3DSA:3.40.1370.10 57 204 1.3E-51 T 19-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 APA12_RS04710 ab2071ba18ef6779e35f79882df483ac 204 Pfam PF00573 Ribosomal protein L4/L1 family 17 202 1.9E-59 T 19-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 APA12_RS09055 2107ad408302e1166e0aee32dcc95557 734 SUPERFAMILY SSF56784 381 507 9.61E-17 T 19-04-2016 IPR023214 HAD-like domain APA12_RS09055 2107ad408302e1166e0aee32dcc95557 734 TIGRFAM TIGR01681 HAD-SF-IIIC: HAD phosphatase, family IIIC 384 505 3.0E-17 T 19-04-2016 IPR010033 HAD-superfamily phosphatase, subfamily IIIC APA12_RS09055 2107ad408302e1166e0aee32dcc95557 734 Gene3D G3DSA:3.40.50.1000 382 506 2.5E-15 T 19-04-2016 IPR023214 HAD-like domain APA12_RS09055 2107ad408302e1166e0aee32dcc95557 734 TIGRFAM TIGR01686 FkbH: FkbH domain 383 705 5.5E-61 T 19-04-2016 IPR010037 FkbH domain APA12_RS01135 2f42654fe37daefc7b1f496b6d472ff2 304 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 137 298 1.9E-62 T 19-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APA12_RS01135 2f42654fe37daefc7b1f496b6d472ff2 304 Gene3D G3DSA:3.40.192.10 19 152 2.9E-45 T 19-04-2016 APA12_RS01135 2f42654fe37daefc7b1f496b6d472ff2 304 PANTHER PTHR10025 7 300 6.7E-145 T 19-04-2016 APA12_RS01135 2f42654fe37daefc7b1f496b6d472ff2 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 46 68 7.6E-81 T 19-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APA12_RS01135 2f42654fe37daefc7b1f496b6d472ff2 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 167 187 7.6E-81 T 19-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APA12_RS01135 2f42654fe37daefc7b1f496b6d472ff2 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 255 271 7.6E-81 T 19-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APA12_RS01135 2f42654fe37daefc7b1f496b6d472ff2 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 272 290 7.6E-81 T 19-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APA12_RS01135 2f42654fe37daefc7b1f496b6d472ff2 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 87 114 7.6E-81 T 19-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APA12_RS01135 2f42654fe37daefc7b1f496b6d472ff2 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 216 245 7.6E-81 T 19-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APA12_RS01135 2f42654fe37daefc7b1f496b6d472ff2 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 122 143 7.6E-81 T 19-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APA12_RS01135 2f42654fe37daefc7b1f496b6d472ff2 304 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 276 284 - T 19-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APA12_RS01135 2f42654fe37daefc7b1f496b6d472ff2 304 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 88 113 - T 19-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APA12_RS01135 2f42654fe37daefc7b1f496b6d472ff2 304 Gene3D G3DSA:3.40.50.720 153 280 4.2E-49 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS01135 2f42654fe37daefc7b1f496b6d472ff2 304 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 17 133 1.0E-37 T 19-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APA12_RS01135 2f42654fe37daefc7b1f496b6d472ff2 304 SUPERFAMILY SSF51735 137 297 1.56E-48 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS01135 2f42654fe37daefc7b1f496b6d472ff2 304 Hamap MF_01576 Bifunctional protein FolD [folD]. 15 299 36.369 T 19-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APA12_RS01135 2f42654fe37daefc7b1f496b6d472ff2 304 SUPERFAMILY SSF53223 15 134 1.06E-39 T 19-04-2016 APA12_RS07725 107a197ff951adea20f96347a7d5b28f 608 Pfam PF04632 Fusaric acid resistance protein family 40 576 1.1E-16 T 19-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 APA12_RS07725 107a197ff951adea20f96347a7d5b28f 608 PANTHER PTHR30509 62 308 3.1E-49 T 19-04-2016 APA12_RS07725 107a197ff951adea20f96347a7d5b28f 608 PANTHER PTHR30509 328 545 3.1E-49 T 19-04-2016 APA12_RS07725 107a197ff951adea20f96347a7d5b28f 608 PANTHER PTHR30509:SF3 62 308 3.1E-49 T 19-04-2016 APA12_RS07725 107a197ff951adea20f96347a7d5b28f 608 PANTHER PTHR30509:SF3 328 545 3.1E-49 T 19-04-2016 APA12_RS14175 e3c2bf0e2d6adbe8d77bef991e0be0a7 229 PANTHER PTHR11731:SF75 24 228 4.8E-31 T 19-04-2016 APA12_RS14175 e3c2bf0e2d6adbe8d77bef991e0be0a7 229 PANTHER PTHR11731 24 228 4.8E-31 T 19-04-2016 APA12_RS14175 e3c2bf0e2d6adbe8d77bef991e0be0a7 229 Gene3D G3DSA:2.120.10.30 108 208 8.3E-4 T 19-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APA12_RS14175 e3c2bf0e2d6adbe8d77bef991e0be0a7 229 SUPERFAMILY SSF69322 105 214 1.7E-5 T 19-04-2016 APA12_RS10785 d74a1649d23f001383826964536b8d1b 345 Pfam PF06258 Mitochondrial fission ELM1 21 266 2.3E-30 T 19-04-2016 IPR009367 Mitochondrial fission protein ELM1-like APA12_RS00545 6647cb86a8b387b30aeb34545bc481ed 782 SUPERFAMILY SSF52540 310 586 2.79E-32 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS00545 6647cb86a8b387b30aeb34545bc481ed 782 Gene3D G3DSA:3.40.50.300 307 431 9.8E-8 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS00545 6647cb86a8b387b30aeb34545bc481ed 782 Pfam PF00271 Helicase conserved C-terminal domain 473 574 5.1E-12 T 19-04-2016 IPR001650 Helicase, C-terminal APA12_RS00545 6647cb86a8b387b30aeb34545bc481ed 782 SMART SM00490 485 574 4.5E-18 T 19-04-2016 IPR001650 Helicase, C-terminal APA12_RS00545 6647cb86a8b387b30aeb34545bc481ed 782 Pfam PF12513 Mitochondrial degradasome RNA helicase subunit C terminal 725 771 1.2E-12 T 19-04-2016 IPR022192 Mitochondrial degradasome RNA helicase subunit, C-terminal domain GO:0016817 APA12_RS00545 6647cb86a8b387b30aeb34545bc481ed 782 PANTHER PTHR12131 306 778 2.7E-141 T 19-04-2016 APA12_RS00545 6647cb86a8b387b30aeb34545bc481ed 782 Gene3D G3DSA:3.40.50.300 478 581 4.4E-16 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05840 44d43c230cbaaabcba1265dce2da5789 246 Gene3D G3DSA:3.40.50.620 10 240 2.7E-76 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS05840 44d43c230cbaaabcba1265dce2da5789 246 PANTHER PTHR11587:SF3 5 235 2.9E-77 T 19-04-2016 APA12_RS05840 44d43c230cbaaabcba1265dce2da5789 246 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 12 228 5.0E-63 T 19-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 APA12_RS05840 44d43c230cbaaabcba1265dce2da5789 246 PIRSF PIRSF006293 8 246 2.0E-71 T 19-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 APA12_RS05840 44d43c230cbaaabcba1265dce2da5789 246 Pfam PF06508 Queuosine biosynthesis protein QueC 12 235 4.7E-74 T 19-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 APA12_RS05840 44d43c230cbaaabcba1265dce2da5789 246 PANTHER PTHR11587 5 235 2.9E-77 T 19-04-2016 APA12_RS05840 44d43c230cbaaabcba1265dce2da5789 246 SUPERFAMILY SSF52402 10 235 6.84E-57 T 19-04-2016 APA12_RS05840 44d43c230cbaaabcba1265dce2da5789 246 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 10 241 50.402 T 19-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 APA12_RS11345 635b4718923f5cf554841b74adc7fa0a 154 PANTHER PTHR36919 20 140 1.9E-15 T 19-04-2016 APA12_RS11345 635b4718923f5cf554841b74adc7fa0a 154 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 36 140 1.2E-22 T 19-04-2016 IPR019223 Domain of unknown function DUF2147 APA12_RS11345 635b4718923f5cf554841b74adc7fa0a 154 PANTHER PTHR36919:SF2 20 140 1.9E-15 T 19-04-2016 APA12_RS07230 312a023af2efe13af990843823a8bbf5 145 SUPERFAMILY SSF46689 35 86 5.64E-9 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS07230 312a023af2efe13af990843823a8bbf5 145 Pfam PF01527 Transposase 33 82 8.1E-11 T 19-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 APA12_RS07230 312a023af2efe13af990843823a8bbf5 145 Gene3D G3DSA:1.10.10.60 122 139 2.4E-6 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS07230 312a023af2efe13af990843823a8bbf5 145 Gene3D G3DSA:1.10.10.60 40 87 2.4E-6 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS12825 b59af2f4e5fc9c4b88bef1cd2389ad9c 244 Pfam PF09490 Probable cobalt transporter subunit (CbtA) 3 229 3.2E-64 T 19-04-2016 IPR012666 Cobalt transporter subunit CbtA, putative APA12_RS03690 c25cfb4c1a6fb5db6967a2021b4d270e 152 Pfam PF05257 CHAP domain 25 90 2.0E-9 T 19-04-2016 IPR007921 CHAP domain APA12_RS03690 c25cfb4c1a6fb5db6967a2021b4d270e 152 SUPERFAMILY SSF54001 26 144 1.08E-22 T 19-04-2016 APA12_RS00450 d29aa95f4a9e9ab0cd75a455df31057b 258 PANTHER PTHR23291 25 258 1.1E-51 T 19-04-2016 IPR006214 Bax inhibitor 1-related APA12_RS00450 d29aa95f4a9e9ab0cd75a455df31057b 258 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 28 251 2.7E-48 T 19-04-2016 APA12_RS00450 d29aa95f4a9e9ab0cd75a455df31057b 258 PANTHER PTHR23291:SF42 25 258 1.1E-51 T 19-04-2016 APA12_RS09270 50ddfc3989884d9b276ee41a2696fab0 315 Pfam PF00589 Phage integrase family 139 298 4.0E-37 T 19-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APA12_RS09270 50ddfc3989884d9b276ee41a2696fab0 315 PANTHER PTHR30349:SF5 3 315 9.7E-76 T 19-04-2016 APA12_RS09270 50ddfc3989884d9b276ee41a2696fab0 315 SUPERFAMILY SSF47823 5 108 7.26E-11 T 19-04-2016 IPR010998 Integrase, Lambda-type, N-terminal APA12_RS09270 50ddfc3989884d9b276ee41a2696fab0 315 Gene3D G3DSA:1.10.443.10 141 301 8.5E-49 T 19-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APA12_RS09270 50ddfc3989884d9b276ee41a2696fab0 315 PANTHER PTHR30349 3 315 9.7E-76 T 19-04-2016 APA12_RS09270 50ddfc3989884d9b276ee41a2696fab0 315 Gene3D G3DSA:1.10.150.130 4 113 2.4E-23 T 19-04-2016 IPR023109 Integrase/recombinase, N-terminal APA12_RS09270 50ddfc3989884d9b276ee41a2696fab0 315 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 7 106 8.6E-13 T 19-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 APA12_RS09270 50ddfc3989884d9b276ee41a2696fab0 315 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 3 314 30.2 T 19-04-2016 IPR023009 Tyrosine recombinase XerC/XerD APA12_RS09270 50ddfc3989884d9b276ee41a2696fab0 315 SUPERFAMILY SSF56349 147 312 4.12E-49 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APA12_RS00915 3725e9468f0785f0d874e7295727c182 225 PANTHER PTHR30399:SF3 20 223 1.3E-42 T 19-04-2016 APA12_RS00915 3725e9468f0785f0d874e7295727c182 225 PANTHER PTHR30399 20 223 1.3E-42 T 19-04-2016 APA12_RS00915 3725e9468f0785f0d874e7295727c182 225 Pfam PF01863 Protein of unknown function DUF45 23 216 1.5E-47 T 19-04-2016 IPR002725 Protein of unknown function DUF45 APA12_RS08865 777f315ad8800609f7204d43e7ab5465 369 Gene3D G3DSA:3.30.565.10 199 361 2.3E-36 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS08865 777f315ad8800609f7204d43e7ab5465 369 SMART SM00091 12 79 1.1E-5 T 19-04-2016 IPR000014 PAS domain APA12_RS08865 777f315ad8800609f7204d43e7ab5465 369 Pfam PF00512 His Kinase A (phospho-acceptor) domain 140 192 7.2E-12 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS08865 777f315ad8800609f7204d43e7ab5465 369 PANTHER PTHR24423:SF520 17 275 4.6E-64 T 19-04-2016 APA12_RS08865 777f315ad8800609f7204d43e7ab5465 369 PANTHER PTHR24423 17 275 4.6E-64 T 19-04-2016 APA12_RS08865 777f315ad8800609f7204d43e7ab5465 369 PANTHER PTHR24423:SF520 295 361 4.6E-64 T 19-04-2016 APA12_RS08865 777f315ad8800609f7204d43e7ab5465 369 PANTHER PTHR24423 295 361 4.6E-64 T 19-04-2016 APA12_RS08865 777f315ad8800609f7204d43e7ab5465 369 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 241 360 1.6E-18 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS08865 777f315ad8800609f7204d43e7ab5465 369 SUPERFAMILY SSF47384 130 195 5.49E-10 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS08865 777f315ad8800609f7204d43e7ab5465 369 SUPERFAMILY SSF55785 15 87 4.19E-7 T 19-04-2016 IPR000014 PAS domain APA12_RS08865 777f315ad8800609f7204d43e7ab5465 369 SUPERFAMILY SSF55874 205 360 1.83E-33 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS08865 777f315ad8800609f7204d43e7ab5465 369 Gene3D G3DSA:3.30.450.20 16 88 1.7E-10 T 19-04-2016 APA12_RS08865 777f315ad8800609f7204d43e7ab5465 369 Gene3D G3DSA:1.10.287.130 134 191 2.8E-10 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS08865 777f315ad8800609f7204d43e7ab5465 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 295 309 2.1E-12 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS08865 777f315ad8800609f7204d43e7ab5465 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 324 342 2.1E-12 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS08865 777f315ad8800609f7204d43e7ab5465 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 313 323 2.1E-12 T 19-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APA12_RS08865 777f315ad8800609f7204d43e7ab5465 369 SMART SM00388 137 201 1.1E-11 T 19-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APA12_RS08865 777f315ad8800609f7204d43e7ab5465 369 SMART SM00387 241 363 9.7E-30 T 19-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APA12_RS02895 dbd5cd3ab78ec098582b94f3e09dc0a8 285 Gene3D G3DSA:3.20.20.150 11 284 5.4E-48 T 19-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APA12_RS02895 dbd5cd3ab78ec098582b94f3e09dc0a8 285 PANTHER PTHR12110:SF27 4 277 2.0E-56 T 19-04-2016 APA12_RS02895 dbd5cd3ab78ec098582b94f3e09dc0a8 285 SUPERFAMILY SSF51658 21 267 4.01E-44 T 19-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APA12_RS02895 dbd5cd3ab78ec098582b94f3e09dc0a8 285 Pfam PF01261 Xylose isomerase-like TIM barrel 37 236 2.6E-25 T 19-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APA12_RS02895 dbd5cd3ab78ec098582b94f3e09dc0a8 285 PANTHER PTHR12110 4 277 2.0E-56 T 19-04-2016 APA12_RS11760 9a6f8cd04a44d85d887a438622df05ab 194 Gene3D G3DSA:3.40.50.300 24 188 1.9E-62 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS11760 9a6f8cd04a44d85d887a438622df05ab 194 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 28 180 8.4E-53 T 19-04-2016 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530|UniPathway: UPA00792 APA12_RS11760 9a6f8cd04a44d85d887a438622df05ab 194 Pfam PF13671 AAA domain 27 160 3.1E-11 T 19-04-2016 APA12_RS11760 9a6f8cd04a44d85d887a438622df05ab 194 PANTHER PTHR11603 26 188 7.7E-66 T 19-04-2016 APA12_RS11760 9a6f8cd04a44d85d887a438622df05ab 194 SUPERFAMILY SSF52540 26 188 7.24E-23 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS06195 bca45ead6902d6b174b783781eee629d 544 SUPERFAMILY SSF52317 288 541 1.38E-76 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like APA12_RS06195 bca45ead6902d6b174b783781eee629d 544 Hamap MF_01227 CTP synthase [pyrG]. 2 541 49.703 T 19-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 APA12_RS06195 bca45ead6902d6b174b783781eee629d 544 Gene3D G3DSA:3.40.50.300 1 283 1.2E-125 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS06195 bca45ead6902d6b174b783781eee629d 544 Pfam PF00117 Glutamine amidotransferase class-I 301 534 1.5E-52 T 19-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 APA12_RS06195 bca45ead6902d6b174b783781eee629d 544 Pfam PF06418 CTP synthase N-terminus 3 264 3.3E-119 T 19-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 APA12_RS06195 bca45ead6902d6b174b783781eee629d 544 PANTHER PTHR11550 1 540 0.0 T 19-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 APA12_RS06195 bca45ead6902d6b174b783781eee629d 544 SUPERFAMILY SSF52540 1 267 1.75E-118 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS06195 bca45ead6902d6b174b783781eee629d 544 TIGRFAM TIGR00337 PyrG: CTP synthase 2 536 9.5E-228 T 19-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 APA12_RS06195 bca45ead6902d6b174b783781eee629d 544 Gene3D G3DSA:3.40.50.880 288 543 4.9E-90 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like APA12_RS06700 e7742bdc464c470b00d35c0991531bec 473 SUPERFAMILY SSF56935 90 457 3.8E-53 T 19-04-2016 APA12_RS06700 e7742bdc464c470b00d35c0991531bec 473 PANTHER PTHR32552 111 445 3.5E-55 T 19-04-2016 APA12_RS06700 e7742bdc464c470b00d35c0991531bec 473 Gene3D G3DSA:2.170.130.10 87 231 1.4E-30 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS06700 e7742bdc464c470b00d35c0991531bec 473 PANTHER PTHR32552:SF37 111 445 3.5E-55 T 19-04-2016 APA12_RS06700 e7742bdc464c470b00d35c0991531bec 473 Gene3D G3DSA:2.40.170.20 238 462 5.3E-29 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS06700 e7742bdc464c470b00d35c0991531bec 473 Pfam PF07715 TonB-dependent Receptor Plug Domain 123 221 2.8E-15 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS06395 4be520920a2fcf2c98caa5ebb9401df9 249 Gene3D G3DSA:3.40.50.2300 126 246 8.0E-23 T 19-04-2016 APA12_RS06395 4be520920a2fcf2c98caa5ebb9401df9 249 SMART SM00448 127 237 1.1E-14 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS06395 4be520920a2fcf2c98caa5ebb9401df9 249 SUPERFAMILY SSF52172 128 243 1.42E-22 T 19-04-2016 IPR011006 CheY-like superfamily APA12_RS06395 4be520920a2fcf2c98caa5ebb9401df9 249 PANTHER PTHR26402:SF413 127 230 8.2E-24 T 19-04-2016 APA12_RS06395 4be520920a2fcf2c98caa5ebb9401df9 249 Pfam PF00072 Response regulator receiver domain 129 233 6.4E-13 T 19-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APA12_RS06395 4be520920a2fcf2c98caa5ebb9401df9 249 PANTHER PTHR26402 127 230 8.2E-24 T 19-04-2016 APA12_RS11750 a84088548302be6a132a53e468c075b9 248 Gene3D G3DSA:3.40.50.1360 11 243 3.0E-72 T 19-04-2016 APA12_RS11750 a84088548302be6a132a53e468c075b9 248 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 20 243 5.3E-63 T 19-04-2016 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31|UniPathway: UPA00115 APA12_RS11750 a84088548302be6a132a53e468c075b9 248 PANTHER PTHR11054 10 243 2.4E-78 T 19-04-2016 APA12_RS11750 a84088548302be6a132a53e468c075b9 248 SUPERFAMILY SSF100950 12 244 7.78E-66 T 19-04-2016 APA12_RS11750 a84088548302be6a132a53e468c075b9 248 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 16 236 9.3E-68 T 19-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 APA12_RS02750 d5fa95575428ac5741eb19205ca1ed36 807 Gene3D G3DSA:2.170.130.10 87 183 3.4E-9 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS02750 d5fa95575428ac5741eb19205ca1ed36 807 SUPERFAMILY SSF56935 59 771 8.42E-76 T 19-04-2016 APA12_RS02750 d5fa95575428ac5741eb19205ca1ed36 807 Pfam PF07715 TonB-dependent Receptor Plug Domain 87 186 9.2E-10 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS02750 d5fa95575428ac5741eb19205ca1ed36 807 Pfam PF00593 TonB dependent receptor 531 770 4.0E-18 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS02750 d5fa95575428ac5741eb19205ca1ed36 807 Gene3D G3DSA:2.40.170.20 192 805 1.5E-67 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS08750 e1a0abde8649bde78938d31033112232 463 SUPERFAMILY SSF103473 256 451 6.41E-60 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS08750 e1a0abde8649bde78938d31033112232 463 SUPERFAMILY SSF103473 19 207 6.41E-60 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS08750 e1a0abde8649bde78938d31033112232 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 148 172 3.2E-8 T 19-04-2016 APA12_RS08750 e1a0abde8649bde78938d31033112232 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 118 138 3.2E-8 T 19-04-2016 APA12_RS08750 e1a0abde8649bde78938d31033112232 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 27 51 3.2E-8 T 19-04-2016 APA12_RS08750 e1a0abde8649bde78938d31033112232 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 275 300 3.2E-8 T 19-04-2016 APA12_RS08750 e1a0abde8649bde78938d31033112232 463 Pfam PF07690 Major Facilitator Superfamily 28 418 6.1E-45 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APA12_RS08750 e1a0abde8649bde78938d31033112232 463 PANTHER PTHR23501:SF5 14 431 7.7E-112 T 19-04-2016 APA12_RS08750 e1a0abde8649bde78938d31033112232 463 PANTHER PTHR23501 14 431 7.7E-112 T 19-04-2016 APA12_RS08750 e1a0abde8649bde78938d31033112232 463 Gene3D G3DSA:1.20.1250.20 21 202 2.9E-23 T 19-04-2016 APA12_RS08750 e1a0abde8649bde78938d31033112232 463 Gene3D G3DSA:1.20.1250.20 268 452 1.3E-17 T 19-04-2016 APA12_RS10550 871c13bf06d23060f8a2870db173fc92 400 PANTHER PTHR11751:SF306 14 397 2.6E-150 T 19-04-2016 APA12_RS10550 871c13bf06d23060f8a2870db173fc92 400 Gene3D G3DSA:3.40.640.10 44 275 3.8E-73 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APA12_RS10550 871c13bf06d23060f8a2870db173fc92 400 SUPERFAMILY SSF53383 2 398 1.33E-113 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APA12_RS10550 871c13bf06d23060f8a2870db173fc92 400 Pfam PF00155 Aminotransferase class I and II 32 392 6.3E-79 T 19-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APA12_RS10550 871c13bf06d23060f8a2870db173fc92 400 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 19-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 APA12_RS10550 871c13bf06d23060f8a2870db173fc92 400 Gene3D G3DSA:3.90.1150.10 276 399 7.1E-47 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APA12_RS10550 871c13bf06d23060f8a2870db173fc92 400 PANTHER PTHR11751 14 397 2.6E-150 T 19-04-2016 APA12_RS02325 240c516e0f6b57f32eb2eccfde371bc0 288 Gene3D G3DSA:1.10.10.10 4 81 4.1E-20 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS02325 240c516e0f6b57f32eb2eccfde371bc0 288 PANTHER PTHR30126 4 282 2.7E-60 T 19-04-2016 APA12_RS02325 240c516e0f6b57f32eb2eccfde371bc0 288 SUPERFAMILY SSF53850 90 284 7.6E-37 T 19-04-2016 APA12_RS02325 240c516e0f6b57f32eb2eccfde371bc0 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 7.0E-16 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS02325 240c516e0f6b57f32eb2eccfde371bc0 288 Gene3D G3DSA:3.40.190.10 196 256 3.6E-12 T 19-04-2016 APA12_RS02325 240c516e0f6b57f32eb2eccfde371bc0 288 Pfam PF03466 LysR substrate binding domain 90 281 3.1E-40 T 19-04-2016 IPR005119 LysR, substrate-binding APA12_RS02325 240c516e0f6b57f32eb2eccfde371bc0 288 SUPERFAMILY SSF46785 4 111 2.38E-18 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS02325 240c516e0f6b57f32eb2eccfde371bc0 288 Gene3D G3DSA:3.40.190.10 89 195 3.2E-21 T 19-04-2016 APA12_RS08345 869fcdbd9b73c2a949a84c2d431c53d9 840 PIRSF PIRSF001174 37 814 0.0 T 19-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 APA12_RS08345 869fcdbd9b73c2a949a84c2d431c53d9 840 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 634 650 6.38E-55 T 19-04-2016 APA12_RS08345 869fcdbd9b73c2a949a84c2d431c53d9 840 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 712 731 6.38E-55 T 19-04-2016 APA12_RS08345 869fcdbd9b73c2a949a84c2d431c53d9 840 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 765 783 6.38E-55 T 19-04-2016 APA12_RS08345 869fcdbd9b73c2a949a84c2d431c53d9 840 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 742 761 6.38E-55 T 19-04-2016 APA12_RS08345 869fcdbd9b73c2a949a84c2d431c53d9 840 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 396 415 6.38E-55 T 19-04-2016 APA12_RS08345 869fcdbd9b73c2a949a84c2d431c53d9 840 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 392 528 2.7E-20 T 19-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APA12_RS08345 869fcdbd9b73c2a949a84c2d431c53d9 840 PANTHER PTHR10046:SF43 20 815 0.0 T 19-04-2016 APA12_RS08345 869fcdbd9b73c2a949a84c2d431c53d9 840 Gene3D G3DSA:3.30.230.10 629 809 9.3E-72 T 19-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APA12_RS08345 869fcdbd9b73c2a949a84c2d431c53d9 840 SUPERFAMILY SSF88697 51 241 1.07E-45 T 19-04-2016 IPR015947 PUA-like domain APA12_RS08345 869fcdbd9b73c2a949a84c2d431c53d9 840 Gene3D G3DSA:3.40.50.300 351 542 9.6E-37 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS08345 869fcdbd9b73c2a949a84c2d431c53d9 840 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 715 723 - T 19-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 APA12_RS08345 869fcdbd9b73c2a949a84c2d431c53d9 840 Gene3D G3DSA:1.10.8.60 543 623 4.1E-31 T 19-04-2016 APA12_RS08345 869fcdbd9b73c2a949a84c2d431c53d9 840 Hamap MF_01973 Lon protease [lon]. 51 811 71.93 T 19-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 APA12_RS08345 869fcdbd9b73c2a949a84c2d431c53d9 840 PANTHER PTHR10046 20 815 0.0 T 19-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 APA12_RS08345 869fcdbd9b73c2a949a84c2d431c53d9 840 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 51 240 3.4E-38 T 19-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 APA12_RS08345 869fcdbd9b73c2a949a84c2d431c53d9 840 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 609 811 3.4E-96 T 19-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 APA12_RS08345 869fcdbd9b73c2a949a84c2d431c53d9 840 SMART SM00382 388 540 2.4E-11 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS08345 869fcdbd9b73c2a949a84c2d431c53d9 840 SUPERFAMILY SSF52540 353 625 4.92E-55 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS08345 869fcdbd9b73c2a949a84c2d431c53d9 840 TIGRFAM TIGR00763 lon: endopeptidase La 53 810 2.6E-300 T 19-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 APA12_RS08345 869fcdbd9b73c2a949a84c2d431c53d9 840 SUPERFAMILY SSF54211 634 809 1.25E-56 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APA12_RS08345 869fcdbd9b73c2a949a84c2d431c53d9 840 SMART SM00464 50 242 4.6E-71 T 19-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 APA12_RS09115 596afd3f6d202a0d841f7cf8043f16c6 124 SUPERFAMILY SSF56784 2 103 5.13E-20 T 19-04-2016 IPR023214 HAD-like domain APA12_RS09115 596afd3f6d202a0d841f7cf8043f16c6 124 TIGRFAM TIGR01689 EcbF-BcbF: capsule biosynthesis phosphatase 1 122 3.1E-54 T 19-04-2016 IPR010039 Capsule biosynthesis phosphatase APA12_RS09115 596afd3f6d202a0d841f7cf8043f16c6 124 Gene3D G3DSA:3.40.50.1000 2 120 2.7E-33 T 19-04-2016 IPR023214 HAD-like domain APA12_RS03245 3355ee1b03cb6d4843120330ed5a27cd 207 Pfam PF01936 NYN domain 8 165 8.6E-36 T 19-04-2016 IPR021139 NYN domain, limkain-b1-type APA12_RS03245 3355ee1b03cb6d4843120330ed5a27cd 207 Gene3D G3DSA:3.40.50.1010 3 168 3.1E-44 T 19-04-2016 IPR029060 PIN domain-like APA12_RS03245 3355ee1b03cb6d4843120330ed5a27cd 207 PANTHER PTHR35458:SF1 6 204 1.4E-71 T 19-04-2016 APA12_RS03245 3355ee1b03cb6d4843120330ed5a27cd 207 PANTHER PTHR35458 6 204 1.4E-71 T 19-04-2016 APA12_RS07880 34ffcfd65d7b681cd9dca451efe2dac2 746 Pfam PF13403 Hint domain 396 537 7.4E-45 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS07880 34ffcfd65d7b681cd9dca451efe2dac2 746 Pfam PF16168 Adhesin of bacterial autotransporter system, probable stalk 182 230 2.7E-7 T 19-04-2016 IPR030930 Adhesin of bacterial autotransporter system APA12_RS07880 34ffcfd65d7b681cd9dca451efe2dac2 746 SUPERFAMILY SSF51294 397 534 4.19E-12 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS07880 34ffcfd65d7b681cd9dca451efe2dac2 746 Gene3D G3DSA:2.170.16.10 393 541 6.2E-7 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS07880 34ffcfd65d7b681cd9dca451efe2dac2 746 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 128 162 1.6E-6 T 19-04-2016 IPR030930 Adhesin of bacterial autotransporter system APA12_RS07880 34ffcfd65d7b681cd9dca451efe2dac2 746 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 203 238 1.7E-6 T 19-04-2016 IPR030930 Adhesin of bacterial autotransporter system APA12_RS07880 34ffcfd65d7b681cd9dca451efe2dac2 746 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 220 253 5.8E-7 T 19-04-2016 IPR030930 Adhesin of bacterial autotransporter system APA12_RS07880 34ffcfd65d7b681cd9dca451efe2dac2 746 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 94 126 1.8E-6 T 19-04-2016 IPR030930 Adhesin of bacterial autotransporter system APA12_RS07385 364e58a737d2713cb3b1e97477ffc9aa 280 Gene3D G3DSA:2.40.170.20 169 266 1.9E-6 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS07385 364e58a737d2713cb3b1e97477ffc9aa 280 Pfam PF13557 Putative MetA-pathway of phenol degradation 53 275 3.7E-24 T 19-04-2016 IPR025737 MetA-pathway of phenol degradation, putative APA12_RS12055 efdebdaf3e2ef297b81c31dd0d32844e 264 Gene3D G3DSA:3.40.50.1820 13 261 2.3E-46 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS12055 efdebdaf3e2ef297b81c31dd0d32844e 264 SUPERFAMILY SSF53474 13 261 3.48E-47 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS12055 efdebdaf3e2ef297b81c31dd0d32844e 264 Pfam PF12697 Alpha/beta hydrolase family 31 255 1.9E-18 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APA12_RS12055 efdebdaf3e2ef297b81c31dd0d32844e 264 PANTHER PTHR10992 15 261 2.6E-35 T 19-04-2016 APA12_RS09260 09e3865deff25ffb3236c8e835f08a0f 311 SUPERFAMILY SSF50630 187 294 4.57E-10 T 19-04-2016 IPR021109 Aspartic peptidase domain APA12_RS09260 09e3865deff25ffb3236c8e835f08a0f 311 Pfam PF13650 Aspartyl protease 195 286 1.6E-9 T 19-04-2016 APA12_RS09260 09e3865deff25ffb3236c8e835f08a0f 311 Pfam PF13650 Aspartyl protease 50 144 4.1E-10 T 19-04-2016 APA12_RS09260 09e3865deff25ffb3236c8e835f08a0f 311 SUPERFAMILY SSF50630 44 153 6.19E-9 T 19-04-2016 IPR021109 Aspartic peptidase domain APA12_RS12890 ba3ced2b849a365b23ba3244c1392fb0 342 SUPERFAMILY SSF53800 17 341 1.03E-95 T 19-04-2016 APA12_RS12890 ba3ced2b849a365b23ba3244c1392fb0 342 PANTHER PTHR11108 1 338 1.2E-111 T 19-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 APA12_RS12890 ba3ced2b849a365b23ba3244c1392fb0 342 Pfam PF00762 Ferrochelatase 19 337 7.2E-103 T 19-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 APA12_RS12890 ba3ced2b849a365b23ba3244c1392fb0 342 TIGRFAM TIGR00109 hemH: ferrochelatase 17 335 7.8E-87 T 19-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 APA12_RS12890 ba3ced2b849a365b23ba3244c1392fb0 342 Gene3D G3DSA:3.40.50.1400 217 339 1.9E-30 T 19-04-2016 APA12_RS12890 ba3ced2b849a365b23ba3244c1392fb0 342 Hamap MF_00323 Ferrochelatase [hemH]. 17 338 36.515 T 19-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 APA12_RS12890 ba3ced2b849a365b23ba3244c1392fb0 342 Gene3D G3DSA:3.40.50.1400 17 216 1.3E-64 T 19-04-2016 APA12_RS12890 ba3ced2b849a365b23ba3244c1392fb0 342 ProSitePatterns PS00534 Ferrochelatase signature. 207 227 - T 19-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 APA12_RS09455 f4e9b5cbde4cc77e19a82baa312d149f 318 Pfam PF07859 alpha/beta hydrolase fold 83 291 1.8E-60 T 19-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 APA12_RS09455 f4e9b5cbde4cc77e19a82baa312d149f 318 SUPERFAMILY SSF53474 38 316 2.38E-66 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS09455 f4e9b5cbde4cc77e19a82baa312d149f 318 PANTHER PTHR23024 64 317 8.8E-64 T 19-04-2016 APA12_RS09455 f4e9b5cbde4cc77e19a82baa312d149f 318 Gene3D G3DSA:3.40.50.1820 5 317 5.5E-81 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS06035 bce2c7f84c2033cfd55c7e40616b9dc3 363 PANTHER PTHR21716:SF20 10 358 9.1E-65 T 19-04-2016 APA12_RS06035 bce2c7f84c2033cfd55c7e40616b9dc3 363 PANTHER PTHR21716 10 358 9.1E-65 T 19-04-2016 IPR002549 Transmembrane protein TqsA-like APA12_RS06035 bce2c7f84c2033cfd55c7e40616b9dc3 363 Pfam PF01594 Domain of unknown function DUF20 16 339 3.8E-43 T 19-04-2016 IPR002549 Transmembrane protein TqsA-like APA12_RS08840 00626e7c1d9fe762e146fd5cc9302673 439 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 212 232 2.7E-9 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 APA12_RS08840 00626e7c1d9fe762e146fd5cc9302673 439 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 279 297 2.7E-9 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 APA12_RS08840 00626e7c1d9fe762e146fd5cc9302673 439 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 233 251 2.7E-9 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 APA12_RS08840 00626e7c1d9fe762e146fd5cc9302673 439 PANTHER PTHR10229 15 431 1.4E-162 T 19-04-2016 IPR016496 GTPase HflX GO:0005525 APA12_RS08840 00626e7c1d9fe762e146fd5cc9302673 439 SUPERFAMILY SSF52540 210 382 1.83E-38 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS08840 00626e7c1d9fe762e146fd5cc9302673 439 Pfam PF16360 GTP-binding GTPase Middle Region 125 204 8.1E-29 T 19-04-2016 IPR032305 GTP-binding protein, middle domain APA12_RS08840 00626e7c1d9fe762e146fd5cc9302673 439 PANTHER PTHR10229:SF0 15 431 1.4E-162 T 19-04-2016 APA12_RS08840 00626e7c1d9fe762e146fd5cc9302673 439 Pfam PF13167 GTP-binding GTPase N-terminal 36 122 1.3E-24 T 19-04-2016 IPR025121 GTPase HflX, N-terminal APA12_RS08840 00626e7c1d9fe762e146fd5cc9302673 439 Gene3D G3DSA:3.40.50.300 211 377 3.0E-30 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS08840 00626e7c1d9fe762e146fd5cc9302673 439 PIRSF PIRSF006809 7 436 2.0E-141 T 19-04-2016 IPR016496 GTPase HflX GO:0005525 APA12_RS08840 00626e7c1d9fe762e146fd5cc9302673 439 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 32 374 3.0E-131 T 19-04-2016 IPR016496 GTPase HflX GO:0005525 APA12_RS08840 00626e7c1d9fe762e146fd5cc9302673 439 Hamap MF_00900 GTPase HflX [hflX]. 38 404 45.082 T 19-04-2016 IPR016496 GTPase HflX GO:0005525 APA12_RS08840 00626e7c1d9fe762e146fd5cc9302673 439 Pfam PF01926 50S ribosome-binding GTPase 212 337 2.9E-19 T 19-04-2016 IPR006073 GTP binding domain GO:0005525 APA12_RS07845 5a898c7735ee3926f38d9bcfd4aac986 243 PANTHER PTHR12993 27 214 3.3E-24 T 19-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related APA12_RS07845 5a898c7735ee3926f38d9bcfd4aac986 243 PANTHER PTHR12993:SF11 27 214 3.3E-24 T 19-04-2016 APA12_RS07845 5a898c7735ee3926f38d9bcfd4aac986 243 Pfam PF02585 GlcNAc-PI de-N-acetylase 27 153 1.8E-22 T 19-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related APA12_RS07845 5a898c7735ee3926f38d9bcfd4aac986 243 Gene3D G3DSA:3.40.50.10320 26 218 1.9E-34 T 19-04-2016 IPR024078 Putative deacetylase LmbE-like domain APA12_RS07845 5a898c7735ee3926f38d9bcfd4aac986 243 SUPERFAMILY SSF102588 25 216 3.4E-36 T 19-04-2016 IPR024078 Putative deacetylase LmbE-like domain APA12_RS12285 59ace51669ec87d6cc3137893671fed7 363 Pfam PF02625 XdhC and CoxI family 20 87 3.0E-22 T 19-04-2016 IPR003777 XdhC- CoxI APA12_RS12285 59ace51669ec87d6cc3137893671fed7 363 PANTHER PTHR30388:SF4 167 361 1.7E-93 T 19-04-2016 APA12_RS12285 59ace51669ec87d6cc3137893671fed7 363 PANTHER PTHR30388:SF4 11 136 1.7E-93 T 19-04-2016 APA12_RS12285 59ace51669ec87d6cc3137893671fed7 363 PANTHER PTHR30388 167 361 1.7E-93 T 19-04-2016 APA12_RS12285 59ace51669ec87d6cc3137893671fed7 363 PANTHER PTHR30388 11 136 1.7E-93 T 19-04-2016 APA12_RS12285 59ace51669ec87d6cc3137893671fed7 363 Pfam PF13478 XdhC Rossmann domain 203 348 1.1E-40 T 19-04-2016 IPR027051 XdhC Rossmann domain APA12_RS12285 59ace51669ec87d6cc3137893671fed7 363 Gene3D G3DSA:3.40.50.720 201 288 8.3E-4 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS05460 1344569663e7d8e218c02d6113328608 1409 PANTHER PTHR36985 682 1397 1.1E-25 T 19-04-2016 APA12_RS05460 1344569663e7d8e218c02d6113328608 1409 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 1047 1409 2.1E-52 T 19-04-2016 IPR007452 Translocation and assembly module TamB APA12_RS08670 9b5bb79c8a83fceabd06b42d8e0a7c0e 207 PANTHER PTHR11670:SF38 1 199 2.9E-97 T 19-04-2016 APA12_RS08670 9b5bb79c8a83fceabd06b42d8e0a7c0e 207 Pfam PF00694 Aconitase C-terminal domain 1 123 1.8E-34 T 19-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS08670 9b5bb79c8a83fceabd06b42d8e0a7c0e 207 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 201 38.972 T 19-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS08670 9b5bb79c8a83fceabd06b42d8e0a7c0e 207 SUPERFAMILY SSF52016 1 191 1.35E-56 T 19-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APA12_RS08670 9b5bb79c8a83fceabd06b42d8e0a7c0e 207 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 187 2.0E-73 T 19-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS08670 9b5bb79c8a83fceabd06b42d8e0a7c0e 207 Gene3D G3DSA:3.20.19.10 1 193 1.2E-46 T 19-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APA12_RS08670 9b5bb79c8a83fceabd06b42d8e0a7c0e 207 PANTHER PTHR11670 1 199 2.9E-97 T 19-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APA12_RS07065 be7ef43a07d91679f6d73c226062c928 314 Pfam PF07859 alpha/beta hydrolase fold 81 291 5.2E-60 T 19-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 APA12_RS07065 be7ef43a07d91679f6d73c226062c928 314 PANTHER PTHR23024 62 314 7.1E-65 T 19-04-2016 APA12_RS07065 be7ef43a07d91679f6d73c226062c928 314 SUPERFAMILY SSF53474 45 312 1.33E-59 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS07065 be7ef43a07d91679f6d73c226062c928 314 Gene3D G3DSA:3.40.50.1820 5 314 6.2E-76 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS06110 bebbb3a7f413514d846d9716337a51e0 158 PIRSF PIRSF006162 1 156 9.3E-39 T 19-04-2016 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 APA12_RS06110 bebbb3a7f413514d846d9716337a51e0 158 SUPERFAMILY SSF101307 5 147 3.92E-30 T 19-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 APA12_RS06110 bebbb3a7f413514d846d9716337a51e0 158 Pfam PF04608 Phosphatidylglycerophosphatase A 5 148 1.9E-42 T 19-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 APA12_RS06110 bebbb3a7f413514d846d9716337a51e0 158 PANTHER PTHR36305 6 155 1.1E-29 T 19-04-2016 APA12_RS08120 70be3cce8118f71a16ca0db3a4fad49d 83 Pfam PF00550 Phosphopantetheine attachment site 33 76 2.2E-8 T 19-04-2016 IPR009081 Phosphopantetheine binding ACP domain APA12_RS08120 70be3cce8118f71a16ca0db3a4fad49d 83 SUPERFAMILY SSF47336 7 79 2.75E-13 T 19-04-2016 IPR009081 Phosphopantetheine binding ACP domain APA12_RS08120 70be3cce8118f71a16ca0db3a4fad49d 83 Gene3D G3DSA:1.10.1200.10 1 81 2.7E-15 T 19-04-2016 IPR009081 Phosphopantetheine binding ACP domain APA12_RS01085 1c444b5894ecb31224cef8fb7dae7541 245 PRINTS PR01805 VacJ lipoprotein signature 101 118 2.9E-18 T 19-04-2016 IPR007428 MlaA lipoprotein GO:0016020 APA12_RS01085 1c444b5894ecb31224cef8fb7dae7541 245 PRINTS PR01805 VacJ lipoprotein signature 137 154 2.9E-18 T 19-04-2016 IPR007428 MlaA lipoprotein GO:0016020 APA12_RS01085 1c444b5894ecb31224cef8fb7dae7541 245 PRINTS PR01805 VacJ lipoprotein signature 33 46 2.9E-18 T 19-04-2016 IPR007428 MlaA lipoprotein GO:0016020 APA12_RS01085 1c444b5894ecb31224cef8fb7dae7541 245 PRINTS PR01805 VacJ lipoprotein signature 50 66 2.9E-18 T 19-04-2016 IPR007428 MlaA lipoprotein GO:0016020 APA12_RS01085 1c444b5894ecb31224cef8fb7dae7541 245 PANTHER PTHR30035:SF3 22 237 8.5E-34 T 19-04-2016 APA12_RS01085 1c444b5894ecb31224cef8fb7dae7541 245 PANTHER PTHR30035 22 237 8.5E-34 T 19-04-2016 IPR007428 MlaA lipoprotein GO:0016020 APA12_RS01085 1c444b5894ecb31224cef8fb7dae7541 245 Pfam PF04333 MlaA lipoprotein 32 227 1.2E-60 T 19-04-2016 IPR007428 MlaA lipoprotein GO:0016020 APA12_RS04445 f143e0292ad955573728daeab50bd598 255 PANTHER PTHR30050:SF5 28 251 1.3E-20 T 19-04-2016 APA12_RS04445 f143e0292ad955573728daeab50bd598 255 SUPERFAMILY SSF52540 38 230 6.09E-14 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS04445 f143e0292ad955573728daeab50bd598 255 PANTHER PTHR30050 28 251 1.3E-20 T 19-04-2016 APA12_RS04445 f143e0292ad955573728daeab50bd598 255 Gene3D G3DSA:1.10.8.60 189 248 8.2E-7 T 19-04-2016 APA12_RS04445 f143e0292ad955573728daeab50bd598 255 Gene3D G3DSA:3.40.50.300 19 178 8.2E-22 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS09355 101c75cf874237b60a60c343eb7ab386 66 Pfam PF07869 Protein of unknown function (DUF1656) 7 61 2.0E-13 T 19-04-2016 IPR012451 Protein of unknown function DUF1656 APA12_RS02575 9efe8384299decbec43563adb88ae811 186 Gene3D G3DSA:3.40.50.1390 16 120 2.3E-9 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APA12_RS02575 9efe8384299decbec43563adb88ae811 186 SMART SM00857 4 136 2.6E-4 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APA12_RS02575 9efe8384299decbec43563adb88ae811 186 Gene3D G3DSA:1.10.10.60 138 177 1.1E-7 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS02575 9efe8384299decbec43563adb88ae811 186 SUPERFAMILY SSF46689 138 179 1.97E-6 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS02575 9efe8384299decbec43563adb88ae811 186 Pfam PF00239 Resolvase, N terminal domain 47 134 9.9E-11 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APA12_RS02575 9efe8384299decbec43563adb88ae811 186 SUPERFAMILY SSF53041 10 135 1.18E-12 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APA12_RS02575 9efe8384299decbec43563adb88ae811 186 PANTHER PTHR30461 56 182 8.5E-14 T 19-04-2016 APA12_RS06465 e62ce2bfdf81b3e574db3e885820fa69 441 PANTHER PTHR11271 1 439 1.5E-181 T 19-04-2016 APA12_RS06465 e62ce2bfdf81b3e574db3e885820fa69 441 SUPERFAMILY SSF51556 46 362 8.62E-93 T 19-04-2016 IPR032466 Metal-dependent hydrolase APA12_RS06465 e62ce2bfdf81b3e574db3e885820fa69 441 Pfam PF01979 Amidohydrolase family 43 411 1.7E-62 T 19-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APA12_RS06465 e62ce2bfdf81b3e574db3e885820fa69 441 Gene3D G3DSA:2.30.40.10 5 48 2.3E-14 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APA12_RS06465 e62ce2bfdf81b3e574db3e885820fa69 441 Gene3D G3DSA:2.30.40.10 373 414 2.3E-14 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APA12_RS06465 e62ce2bfdf81b3e574db3e885820fa69 441 SUPERFAMILY SSF51338 5 46 2.36E-23 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APA12_RS06465 e62ce2bfdf81b3e574db3e885820fa69 441 SUPERFAMILY SSF51338 363 438 2.36E-23 T 19-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APA12_RS06465 e62ce2bfdf81b3e574db3e885820fa69 441 PANTHER PTHR11271:SF37 1 439 1.5E-181 T 19-04-2016 APA12_RS06465 e62ce2bfdf81b3e574db3e885820fa69 441 Gene3D G3DSA:3.20.20.140 49 372 3.0E-107 T 19-04-2016 APA12_RS08145 545aa776edcfbf75e620530d41996ece 399 PANTHER PTHR33529:SF2 17 397 3.7E-44 T 19-04-2016 APA12_RS08145 545aa776edcfbf75e620530d41996ece 399 Pfam PF03739 Predicted permease YjgP/YjgQ family 25 376 6.0E-56 T 19-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 APA12_RS08145 545aa776edcfbf75e620530d41996ece 399 PANTHER PTHR33529 17 397 3.7E-44 T 19-04-2016 APA12_RS12410 64e1114a4cda77b14f6240bd07edc6cf 381 Pfam PF07538 Clostridial hydrophobic W 199 231 4.5E-5 T 19-04-2016 IPR006637 Clostridial hydrophobic repeat APA12_RS12040 ce6018269f19eb40a4743323b69b20c2 435 Pfam PF07690 Major Facilitator Superfamily 32 394 5.9E-38 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APA12_RS12040 ce6018269f19eb40a4743323b69b20c2 435 Gene3D G3DSA:1.20.1250.20 247 429 3.0E-16 T 19-04-2016 APA12_RS12040 ce6018269f19eb40a4743323b69b20c2 435 PANTHER PTHR11662 2 429 4.6E-114 T 19-04-2016 APA12_RS12040 ce6018269f19eb40a4743323b69b20c2 435 PANTHER PTHR11662:SF3 2 429 4.6E-114 T 19-04-2016 APA12_RS12040 ce6018269f19eb40a4743323b69b20c2 435 Gene3D G3DSA:1.20.1250.20 26 223 7.2E-41 T 19-04-2016 APA12_RS12040 ce6018269f19eb40a4743323b69b20c2 435 SUPERFAMILY SSF103473 18 431 4.19E-77 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS11985 93564cc45617ed96ca34fd9424efb091 261 PANTHER PTHR30269:SF9 6 261 8.8E-49 T 19-04-2016 APA12_RS11985 93564cc45617ed96ca34fd9424efb091 261 PANTHER PTHR30269 6 261 8.8E-49 T 19-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 APA12_RS11985 93564cc45617ed96ca34fd9424efb091 261 Pfam PF01925 Sulfite exporter TauE/SafE 14 253 1.0E-53 T 19-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 APA12_RS05380 b5657f4c68be3335862abcfe59042319 251 SUPERFAMILY SSF53271 26 234 1.53E-45 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like APA12_RS05380 b5657f4c68be3335862abcfe59042319 251 PANTHER PTHR19278 27 226 6.8E-39 T 19-04-2016 APA12_RS05380 b5657f4c68be3335862abcfe59042319 251 Pfam PF00156 Phosphoribosyl transferase domain 86 165 9.4E-9 T 19-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APA12_RS05380 b5657f4c68be3335862abcfe59042319 251 Gene3D G3DSA:3.40.50.2020 25 231 7.9E-46 T 19-04-2016 IPR029057 Phosphoribosyltransferase-like APA12_RS05380 b5657f4c68be3335862abcfe59042319 251 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 251 30.478 T 19-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 APA12_RS02105 51ab625dbdedf0535f8f96254adb2eb3 728 Gene3D G3DSA:2.40.170.20 286 724 7.5E-51 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS02105 51ab625dbdedf0535f8f96254adb2eb3 728 Gene3D G3DSA:2.40.170.20 151 254 7.5E-51 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS02105 51ab625dbdedf0535f8f96254adb2eb3 728 SUPERFAMILY SSF56935 33 728 1.36E-66 T 19-04-2016 APA12_RS02105 51ab625dbdedf0535f8f96254adb2eb3 728 Pfam PF00593 TonB dependent receptor 449 724 3.3E-19 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS08385 72d48e495bc77098bf8a7038235949c4 636 SUPERFAMILY SSF52540 227 511 1.63E-75 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS08385 72d48e495bc77098bf8a7038235949c4 636 PANTHER PTHR24031 156 583 2.9E-174 T 19-04-2016 APA12_RS08385 72d48e495bc77098bf8a7038235949c4 636 PANTHER PTHR24031:SF261 156 583 2.9E-174 T 19-04-2016 APA12_RS08385 72d48e495bc77098bf8a7038235949c4 636 Pfam PF00271 Helicase conserved C-terminal domain 383 491 8.3E-28 T 19-04-2016 IPR001650 Helicase, C-terminal APA12_RS08385 72d48e495bc77098bf8a7038235949c4 636 SMART SM00490 410 491 1.1E-33 T 19-04-2016 IPR001650 Helicase, C-terminal APA12_RS08385 72d48e495bc77098bf8a7038235949c4 636 SMART SM00487 174 374 2.5E-60 T 19-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APA12_RS08385 72d48e495bc77098bf8a7038235949c4 636 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 305 313 - T 19-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site APA12_RS08385 72d48e495bc77098bf8a7038235949c4 636 Gene3D G3DSA:3.40.50.300 363 525 1.7E-51 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS08385 72d48e495bc77098bf8a7038235949c4 636 Pfam PF00270 DEAD/DEAH box helicase 179 347 5.0E-51 T 19-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APA12_RS08385 72d48e495bc77098bf8a7038235949c4 636 Gene3D G3DSA:3.40.50.300 149 362 2.8E-81 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS02640 25abb9fb7e792dba436110e713233f85 345 Pfam PF09950 Uncharacterized protein conserved in bacteria (DUF2184) 131 299 1.6E-13 T 19-04-2016 IPR020049 Protein of unknown function DUF2184 APA12_RS05390 c4335ccd864d360e1d27c0af4ea2bae6 436 SUPERFAMILY SSF48256 14 436 8.5E-167 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 APA12_RS05390 c4335ccd864d360e1d27c0af4ea2bae6 436 PANTHER PTHR11739 44 436 3.5E-202 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 APA12_RS05390 c4335ccd864d360e1d27c0af4ea2bae6 436 Gene3D G3DSA:1.10.580.10 59 287 7.1E-101 T 19-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 APA12_RS05390 c4335ccd864d360e1d27c0af4ea2bae6 436 PRINTS PR00143 Citrate synthase signature 226 241 2.9E-57 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 APA12_RS05390 c4335ccd864d360e1d27c0af4ea2bae6 436 PRINTS PR00143 Citrate synthase signature 172 185 2.9E-57 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 APA12_RS05390 c4335ccd864d360e1d27c0af4ea2bae6 436 PRINTS PR00143 Citrate synthase signature 248 276 2.9E-57 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 APA12_RS05390 c4335ccd864d360e1d27c0af4ea2bae6 436 PRINTS PR00143 Citrate synthase signature 367 383 2.9E-57 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 APA12_RS05390 c4335ccd864d360e1d27c0af4ea2bae6 436 PRINTS PR00143 Citrate synthase signature 303 323 2.9E-57 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 APA12_RS05390 c4335ccd864d360e1d27c0af4ea2bae6 436 PRINTS PR00143 Citrate synthase signature 387 401 2.9E-57 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 APA12_RS05390 c4335ccd864d360e1d27c0af4ea2bae6 436 PIRSF PIRSF001369 45 436 3.9E-170 T 19-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 APA12_RS05390 c4335ccd864d360e1d27c0af4ea2bae6 436 Pfam PF00285 Citrate synthase, C-terminal domain 54 419 7.6E-135 T 19-04-2016 IPR002020 Citrate synthase GO:0046912 APA12_RS05390 c4335ccd864d360e1d27c0af4ea2bae6 436 ProSitePatterns PS00480 Citrate synthase signature. 310 322 - T 19-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 APA12_RS05390 c4335ccd864d360e1d27c0af4ea2bae6 436 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 20 430 4.3E-224 T 19-04-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 APA12_RS05390 c4335ccd864d360e1d27c0af4ea2bae6 436 Gene3D G3DSA:1.10.230.10 288 381 1.4E-41 T 19-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain APA12_RS08740 d36620b47d48a45adf8bc3528f7cbcc6 275 Gene3D G3DSA:3.40.1280.10 40 268 4.2E-61 T 19-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APA12_RS08740 d36620b47d48a45adf8bc3528f7cbcc6 275 SUPERFAMILY SSF88697 41 100 1.62E-11 T 19-04-2016 IPR015947 PUA-like domain APA12_RS08740 d36620b47d48a45adf8bc3528f7cbcc6 275 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 46 264 4.3E-34 T 19-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APA12_RS08740 d36620b47d48a45adf8bc3528f7cbcc6 275 PIRSF PIRSF015601 29 270 4.9E-56 T 19-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APA12_RS08740 d36620b47d48a45adf8bc3528f7cbcc6 275 PANTHER PTHR30027:SF3 8 273 1.9E-48 T 19-04-2016 APA12_RS08740 d36620b47d48a45adf8bc3528f7cbcc6 275 SUPERFAMILY SSF75217 104 264 1.67E-37 T 19-04-2016 IPR029028 Alpha/beta knot methyltransferases APA12_RS08740 d36620b47d48a45adf8bc3528f7cbcc6 275 PANTHER PTHR30027 8 273 1.9E-48 T 19-04-2016 APA12_RS08740 d36620b47d48a45adf8bc3528f7cbcc6 275 Pfam PF04452 RNA methyltransferase 49 263 6.8E-52 T 19-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APA12_RS06060 8f969e27621f22dccc6063ee69c794ed 112 Pfam PF00462 Glutaredoxin 18 82 1.3E-19 T 19-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 APA12_RS06060 8f969e27621f22dccc6063ee69c794ed 112 SUPERFAMILY SSF52833 5 105 2.25E-35 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS06060 8f969e27621f22dccc6063ee69c794ed 112 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 6 102 1.8E-47 T 19-04-2016 IPR004480 Monothiol glutaredoxin-related APA12_RS06060 8f969e27621f22dccc6063ee69c794ed 112 Gene3D G3DSA:3.40.30.10 8 103 2.0E-35 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS06060 8f969e27621f22dccc6063ee69c794ed 112 PANTHER PTHR10293 1 106 8.6E-66 T 19-04-2016 IPR004480 Monothiol glutaredoxin-related APA12_RS06060 8f969e27621f22dccc6063ee69c794ed 112 PIRSF PIRSF005894 1 109 4.5E-50 T 19-04-2016 IPR014434 Monothiol glutaredoxin APA12_RS01370 e5847a328b23936672aad9e028fa1559 141 Pfam PF10696 Protein of unknown function (DUF2501) 70 139 5.4E-18 T 19-04-2016 IPR019637 Protein of unknown function DUF2501 APA12_RS13075 c5f6b656874a52e78914298079d0204e 461 Pfam PF13701 Transposase DDE domain group 1 13 458 7.8E-165 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS13075 c5f6b656874a52e78914298079d0204e 461 SUPERFAMILY SSF53098 158 398 1.14E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS10855 70e6759e96404db019a355b760a5c1ab 334 SUPERFAMILY SSF55120 89 328 1.71E-71 T 19-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APA12_RS10855 70e6759e96404db019a355b760a5c1ab 334 PANTHER PTHR11079:SF73 18 334 1.4E-110 T 19-04-2016 APA12_RS10855 70e6759e96404db019a355b760a5c1ab 334 Pfam PF00849 RNA pseudouridylate synthase 101 258 5.5E-34 T 19-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APA12_RS10855 70e6759e96404db019a355b760a5c1ab 334 Gene3D G3DSA:3.10.290.10 27 75 2.0E-7 T 19-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APA12_RS10855 70e6759e96404db019a355b760a5c1ab 334 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 23 329 6.8E-84 T 19-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 APA12_RS10855 70e6759e96404db019a355b760a5c1ab 334 SUPERFAMILY SSF55174 27 114 4.71E-8 T 19-04-2016 APA12_RS10855 70e6759e96404db019a355b760a5c1ab 334 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 148 162 - T 19-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 APA12_RS10855 70e6759e96404db019a355b760a5c1ab 334 PANTHER PTHR11079 18 334 1.4E-110 T 19-04-2016 APA12_RS10855 70e6759e96404db019a355b760a5c1ab 334 SMART SM00363 27 86 0.0038 T 19-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APA12_RS11745 22674ef7f7e0685d0f31b837635ad4cf 295 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 21 248 1.6E-26 T 19-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APA12_RS11745 22674ef7f7e0685d0f31b837635ad4cf 295 Gene3D G3DSA:3.30.1240.10 100 194 1.6E-9 T 19-04-2016 APA12_RS11745 22674ef7f7e0685d0f31b837635ad4cf 295 PANTHER PTHR10000:SF8 18 281 2.0E-58 T 19-04-2016 APA12_RS11745 22674ef7f7e0685d0f31b837635ad4cf 295 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 21 274 2.2E-50 T 19-04-2016 IPR000150 Cof protein GO:0016787 APA12_RS11745 22674ef7f7e0685d0f31b837635ad4cf 295 ProSitePatterns PS01228 Hypothetical cof family signature 1. 21 32 - T 19-04-2016 IPR000150 Cof protein GO:0016787 APA12_RS11745 22674ef7f7e0685d0f31b837635ad4cf 295 Pfam PF08282 haloacid dehalogenase-like hydrolase 22 275 9.7E-55 T 19-04-2016 IPR023214 HAD-like domain APA12_RS11745 22674ef7f7e0685d0f31b837635ad4cf 295 SUPERFAMILY SSF56784 17 280 1.36E-61 T 19-04-2016 IPR023214 HAD-like domain APA12_RS11745 22674ef7f7e0685d0f31b837635ad4cf 295 Gene3D G3DSA:3.40.50.1000 17 89 2.1E-45 T 19-04-2016 IPR023214 HAD-like domain APA12_RS11745 22674ef7f7e0685d0f31b837635ad4cf 295 Gene3D G3DSA:3.40.50.1000 195 280 2.1E-45 T 19-04-2016 IPR023214 HAD-like domain APA12_RS11745 22674ef7f7e0685d0f31b837635ad4cf 295 PANTHER PTHR10000 18 281 2.0E-58 T 19-04-2016 APA12_RS06660 ff1748f9bbd52cdccf1c62f987d7b288 140 PANTHER PTHR11075 8 124 1.8E-32 T 19-04-2016 APA12_RS06660 ff1748f9bbd52cdccf1c62f987d7b288 140 SUPERFAMILY SSF110916 15 101 4.84E-13 T 19-04-2016 APA12_RS06660 ff1748f9bbd52cdccf1c62f987d7b288 140 Gene3D G3DSA:3.30.160.200 6 105 4.9E-31 T 19-04-2016 APA12_RS06660 ff1748f9bbd52cdccf1c62f987d7b288 140 Pfam PF00472 RF-1 domain 8 134 4.0E-24 T 19-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APA12_RS02825 eed3bbbcdd7ab3cbe76ded26862d4c54 401 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 323 396 6.2E-7 T 19-04-2016 IPR006260 TonB, C-terminal GO:0006810 APA12_RS02825 eed3bbbcdd7ab3cbe76ded26862d4c54 401 SUPERFAMILY SSF74653 297 395 7.59E-12 T 19-04-2016 APA12_RS02825 eed3bbbcdd7ab3cbe76ded26862d4c54 401 Gene3D G3DSA:3.30.1150.10 301 395 1.2E-10 T 19-04-2016 APA12_RS02825 eed3bbbcdd7ab3cbe76ded26862d4c54 401 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 321 397 9.5E-12 T 19-04-2016 IPR006260 TonB, C-terminal GO:0006810 APA12_RS06590 53f156ed5f8e6dc8c9166c603bf683b0 375 PANTHER PTHR30294 1 375 1.5E-110 T 19-04-2016 APA12_RS06590 53f156ed5f8e6dc8c9166c603bf683b0 375 PANTHER PTHR30294:SF22 1 375 1.5E-110 T 19-04-2016 APA12_RS06590 53f156ed5f8e6dc8c9166c603bf683b0 375 Pfam PF12698 ABC-2 family transporter protein 24 365 2.2E-34 T 19-04-2016 APA12_RS07300 bf8bd496359af4ebab4893624f9bfb74 418 Pfam PF00375 Sodium:dicarboxylate symporter family 15 405 2.6E-107 T 19-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APA12_RS07300 bf8bd496359af4ebab4893624f9bfb74 418 PANTHER PTHR11958:SF26 14 411 4.1E-139 T 19-04-2016 IPR033380 Glutamate-aspartate symport protein GltP/GltT GO:0015293|GO:0015810|GO:0015813|GO:0016021 APA12_RS07300 bf8bd496359af4ebab4893624f9bfb74 418 PRINTS PR00173 Glutamate-aspartate symporter signature 197 216 2.9E-38 T 19-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APA12_RS07300 bf8bd496359af4ebab4893624f9bfb74 418 PRINTS PR00173 Glutamate-aspartate symporter signature 86 111 2.9E-38 T 19-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APA12_RS07300 bf8bd496359af4ebab4893624f9bfb74 418 PRINTS PR00173 Glutamate-aspartate symporter signature 11 31 2.9E-38 T 19-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APA12_RS07300 bf8bd496359af4ebab4893624f9bfb74 418 PRINTS PR00173 Glutamate-aspartate symporter signature 56 76 2.9E-38 T 19-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APA12_RS07300 bf8bd496359af4ebab4893624f9bfb74 418 PRINTS PR00173 Glutamate-aspartate symporter signature 231 250 2.9E-38 T 19-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APA12_RS07300 bf8bd496359af4ebab4893624f9bfb74 418 PRINTS PR00173 Glutamate-aspartate symporter signature 359 379 2.9E-38 T 19-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APA12_RS07300 bf8bd496359af4ebab4893624f9bfb74 418 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 2.9E-38 T 19-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APA12_RS07300 bf8bd496359af4ebab4893624f9bfb74 418 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 2.9E-38 T 19-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APA12_RS07300 bf8bd496359af4ebab4893624f9bfb74 418 PANTHER PTHR11958 14 411 4.1E-139 T 19-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APA12_RS07300 bf8bd496359af4ebab4893624f9bfb74 418 SUPERFAMILY SSF118215 15 406 1.19E-109 T 19-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APA12_RS07300 bf8bd496359af4ebab4893624f9bfb74 418 Gene3D G3DSA:1.10.3860.10 13 408 2.2E-112 T 19-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APA12_RS03765 aadcf3c85437dedacf43e38bb368efb7 149 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 7 130 5.7E-23 T 19-04-2016 IPR000944 Transcription regulator Rrf2-type APA12_RS03765 aadcf3c85437dedacf43e38bb368efb7 149 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 51 69 - T 19-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site APA12_RS03765 aadcf3c85437dedacf43e38bb368efb7 149 Gene3D G3DSA:1.10.10.10 9 134 1.7E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS03765 aadcf3c85437dedacf43e38bb368efb7 149 PANTHER PTHR33221 4 135 1.7E-23 T 19-04-2016 APA12_RS03765 aadcf3c85437dedacf43e38bb368efb7 149 SUPERFAMILY SSF46785 10 132 1.43E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS03765 aadcf3c85437dedacf43e38bb368efb7 149 Pfam PF02082 Transcriptional regulator 7 85 1.2E-17 T 19-04-2016 IPR000944 Transcription regulator Rrf2-type APA12_RS07815 04292f7970b7e749af6c8b864fd15a37 329 Gene3D G3DSA:2.40.160.60 238 308 4.8E-4 T 19-04-2016 APA12_RS01355 547bf8cff5454d0bd05f3410dfc64c69 226 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 23 73 6.2E-10 T 19-04-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain APA12_RS01355 547bf8cff5454d0bd05f3410dfc64c69 226 Pfam PF01610 Transposase 88 220 8.2E-27 T 19-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain APA12_RS01355 547bf8cff5454d0bd05f3410dfc64c69 226 PANTHER PTHR33498:SF1 1 201 4.1E-21 T 19-04-2016 APA12_RS01355 547bf8cff5454d0bd05f3410dfc64c69 226 PANTHER PTHR33498 1 201 4.1E-21 T 19-04-2016 APA12_RS07710 f3b231520ffe6aa7cc08b19e8104efe4 196 Gene3D G3DSA:1.10.10.10 40 136 3.3E-29 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS07710 f3b231520ffe6aa7cc08b19e8104efe4 196 Pfam PF03551 Transcriptional regulator PadR-like family 55 123 2.8E-18 T 19-04-2016 IPR005149 Transcription regulator PadR, N-terminal APA12_RS07710 f3b231520ffe6aa7cc08b19e8104efe4 196 PANTHER PTHR33169:SF2 34 136 3.7E-27 T 19-04-2016 APA12_RS07710 f3b231520ffe6aa7cc08b19e8104efe4 196 SUPERFAMILY SSF46785 39 133 1.63E-23 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS07710 f3b231520ffe6aa7cc08b19e8104efe4 196 PANTHER PTHR33169 34 136 3.7E-27 T 19-04-2016 APA12_RS13510 b967e9d397bfe070951cdbe22cc595a1 154 Gene3D G3DSA:1.10.10.10 67 150 1.0E-32 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS13510 b967e9d397bfe070951cdbe22cc595a1 154 PANTHER PTHR10815:SF5 34 150 3.6E-42 T 19-04-2016 APA12_RS13510 b967e9d397bfe070951cdbe22cc595a1 154 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 1 149 35.175 T 19-04-2016 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 APA12_RS13510 b967e9d397bfe070951cdbe22cc595a1 154 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 116 122 - T 19-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 APA12_RS13510 b967e9d397bfe070951cdbe22cc595a1 154 SUPERFAMILY SSF46767 67 147 8.63E-26 T 19-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 APA12_RS13510 b967e9d397bfe070951cdbe22cc595a1 154 SUPERFAMILY SSF53155 4 73 2.08E-9 T 19-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 APA12_RS13510 b967e9d397bfe070951cdbe22cc595a1 154 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 69 147 2.2E-28 T 19-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 APA12_RS13510 b967e9d397bfe070951cdbe22cc595a1 154 PANTHER PTHR10815 34 150 3.6E-42 T 19-04-2016 APA12_RS13510 b967e9d397bfe070951cdbe22cc595a1 154 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 68 146 7.8E-28 T 19-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 APA12_RS13000 8a5339c235e8b676ce1fd30e8d5dc50d 277 SUPERFAMILY SSF56925 69 277 1.73E-17 T 19-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APA12_RS13000 8a5339c235e8b676ce1fd30e8d5dc50d 277 PANTHER PTHR36920:SF1 69 277 3.2E-32 T 19-04-2016 APA12_RS13000 8a5339c235e8b676ce1fd30e8d5dc50d 277 PANTHER PTHR36920 69 277 3.2E-32 T 19-04-2016 APA12_RS13000 8a5339c235e8b676ce1fd30e8d5dc50d 277 Gene3D G3DSA:2.40.160.20 69 277 2.9E-45 T 19-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APA12_RS13000 8a5339c235e8b676ce1fd30e8d5dc50d 277 Pfam PF03922 OmpW family 69 277 5.3E-39 T 19-04-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 APA12_RS03225 c97abd3b42ebef41c45bc7aa615b0dec 201 SUPERFAMILY SSF53335 7 179 7.76E-25 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS03225 c97abd3b42ebef41c45bc7aa615b0dec 201 PANTHER PTHR10108 7 164 9.2E-52 T 19-04-2016 APA12_RS03225 c97abd3b42ebef41c45bc7aa615b0dec 201 PANTHER PTHR10108:SF831 7 164 9.2E-52 T 19-04-2016 APA12_RS03225 c97abd3b42ebef41c45bc7aa615b0dec 201 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 2 196 2.5E-66 T 19-04-2016 IPR010743 Methionine biosynthesis MetW APA12_RS03225 c97abd3b42ebef41c45bc7aa615b0dec 201 Gene3D G3DSA:3.40.50.150 12 180 7.8E-20 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS03225 c97abd3b42ebef41c45bc7aa615b0dec 201 Pfam PF07021 Methionine biosynthesis protein MetW 2 196 2.1E-70 T 19-04-2016 IPR010743 Methionine biosynthesis MetW APA12_RS00925 e3623654211b8a6d91b985c6947276ec 145 SUPERFAMILY SSF161098 30 141 7.63E-6 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS00925 e3623654211b8a6d91b985c6947276ec 145 Gene3D G3DSA:1.10.3720.10 31 139 2.6E-4 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS05490 9f1c6df006f3e083ce054d5db85aa144 87 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 5 87 2.5E-19 T 19-04-2016 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 UniPathway: UPA00344 APA12_RS05490 9f1c6df006f3e083ce054d5db85aa144 87 Gene3D G3DSA:3.10.20.30 4 87 1.9E-20 T 19-04-2016 IPR012675 Beta-grasp domain APA12_RS05490 9f1c6df006f3e083ce054d5db85aa144 87 Pfam PF02597 ThiS family 7 87 1.3E-15 T 19-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 APA12_RS05490 9f1c6df006f3e083ce054d5db85aa144 87 SUPERFAMILY SSF54285 5 87 5.61E-17 T 19-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp APA12_RS05490 9f1c6df006f3e083ce054d5db85aa144 87 PANTHER PTHR33359 1 87 2.4E-19 T 19-04-2016 APA12_RS11080 06a6652d5d6d92e135514ef4044580d2 59 Pfam PF11755 Protein of unknown function (DUF3311) 7 55 1.3E-19 T 19-04-2016 IPR021741 Protein of unknown function DUF3311 APA12_RS09700 60f6e384e4220855f3180af3747de946 274 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 5 274 52.647 T 19-04-2016 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein APA12_RS09700 60f6e384e4220855f3180af3747de946 274 PANTHER PTHR31756 7 273 3.7E-87 T 19-04-2016 APA12_RS09700 60f6e384e4220855f3180af3747de946 274 Pfam PF03618 Kinase/pyrophosphorylase 7 268 7.0E-88 T 19-04-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 APA12_RS09700 60f6e384e4220855f3180af3747de946 274 PANTHER PTHR31756:SF3 7 273 3.7E-87 T 19-04-2016 APA12_RS02010 1c881d41e8b06391ce18d45f660de08a 653 Gene3D G3DSA:1.10.530.10 468 622 2.3E-33 T 19-04-2016 APA12_RS02010 1c881d41e8b06391ce18d45f660de08a 653 Pfam PF01464 Transglycosylase SLT domain 468 583 4.3E-19 T 19-04-2016 IPR008258 Transglycosylase SLT domain 1 APA12_RS02010 1c881d41e8b06391ce18d45f660de08a 653 PANTHER PTHR21666 469 619 4.8E-25 T 19-04-2016 APA12_RS02010 1c881d41e8b06391ce18d45f660de08a 653 SUPERFAMILY SSF53955 468 628 4.28E-35 T 19-04-2016 IPR023346 Lysozyme-like domain APA12_RS02010 1c881d41e8b06391ce18d45f660de08a 653 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 477 505 - T 19-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 APA12_RS02010 1c881d41e8b06391ce18d45f660de08a 653 SUPERFAMILY SSF48435 69 442 1.57E-6 T 19-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 APA12_RS09675 d45d5c42c3dada98892a4c4b198a45de 326 PANTHER PTHR33694 31 317 6.1E-102 T 19-04-2016 APA12_RS09675 d45d5c42c3dada98892a4c4b198a45de 326 Gene3D G3DSA:3.30.1700.10 160 314 3.9E-52 T 19-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 APA12_RS09675 d45d5c42c3dada98892a4c4b198a45de 326 SUPERFAMILY SSF54211 165 309 9.86E-45 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APA12_RS09675 d45d5c42c3dada98892a4c4b198a45de 326 SUPERFAMILY SSF54211 32 157 7.59E-38 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APA12_RS09675 d45d5c42c3dada98892a4c4b198a45de 326 PANTHER PTHR33694:SF1 31 317 6.1E-102 T 19-04-2016 APA12_RS09675 d45d5c42c3dada98892a4c4b198a45de 326 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 33 322 1.1E-93 T 19-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 APA12_RS09675 d45d5c42c3dada98892a4c4b198a45de 326 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 31 312 41.812 T 19-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 APA12_RS09675 d45d5c42c3dada98892a4c4b198a45de 326 Gene3D G3DSA:3.30.230.20 32 157 6.4E-43 T 19-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 APA12_RS09675 d45d5c42c3dada98892a4c4b198a45de 326 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 33 307 9.7E-101 T 19-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 APA12_RS05745 149d0db402d2d36dfa86cf5ac2340888 282 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 278 15.498 T 19-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 APA12_RS05745 149d0db402d2d36dfa86cf5ac2340888 282 Pfam PF02673 Bacitracin resistance protein BacA 6 272 1.0E-66 T 19-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 APA12_RS05745 149d0db402d2d36dfa86cf5ac2340888 282 PANTHER PTHR30622:SF4 1 281 2.6E-65 T 19-04-2016 APA12_RS05745 149d0db402d2d36dfa86cf5ac2340888 282 PANTHER PTHR30622 1 281 2.6E-65 T 19-04-2016 APA12_RS11400 9df0ca3a31b121757e1d6e0f0c3b3b60 212 Pfam PF00881 Nitroreductase family 20 183 1.4E-26 T 19-04-2016 IPR029479 Nitroreductase APA12_RS11400 9df0ca3a31b121757e1d6e0f0c3b3b60 212 TIGRFAM TIGR02476 BluB: 5,6-dimethylbenzimidazole synthase 6 206 5.2E-74 T 19-04-2016 IPR012825 5,6-dimethylbenzimidazole synthase BluB KEGG: 00740+1.13.11.79|MetaCyc: PWY-5508|MetaCyc: PWY-5523 APA12_RS11400 9df0ca3a31b121757e1d6e0f0c3b3b60 212 Gene3D G3DSA:3.40.109.10 10 205 3.6E-41 T 19-04-2016 IPR000415 Nitroreductase-like GO:0016491 APA12_RS11400 9df0ca3a31b121757e1d6e0f0c3b3b60 212 SUPERFAMILY SSF55469 6 202 4.71E-43 T 19-04-2016 IPR000415 Nitroreductase-like GO:0016491 APA12_RS11400 9df0ca3a31b121757e1d6e0f0c3b3b60 212 PANTHER PTHR23026 12 212 2.3E-25 T 19-04-2016 APA12_RS10505 4efb17156f7b65f448bc5c6d65eb2a14 406 Pfam PF07690 Major Facilitator Superfamily 16 358 7.1E-44 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APA12_RS10505 4efb17156f7b65f448bc5c6d65eb2a14 406 PANTHER PTHR11662 9 400 2.6E-60 T 19-04-2016 APA12_RS10505 4efb17156f7b65f448bc5c6d65eb2a14 406 SUPERFAMILY SSF103473 7 401 2.22E-67 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS10505 4efb17156f7b65f448bc5c6d65eb2a14 406 Gene3D G3DSA:1.20.1250.20 9 199 2.3E-41 T 19-04-2016 APA12_RS10505 4efb17156f7b65f448bc5c6d65eb2a14 406 Gene3D G3DSA:1.20.1250.20 209 401 2.6E-17 T 19-04-2016 APA12_RS07785 a2af783f5df577b34f1397f921e1457f 562 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 23 545 1.6E-161 T 19-04-2016 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 APA12_RS07785 a2af783f5df577b34f1397f921e1457f 562 SUPERFAMILY SSF90123 11 323 1.83E-39 T 19-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APA12_RS07785 a2af783f5df577b34f1397f921e1457f 562 SUPERFAMILY SSF52540 336 553 1.02E-59 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS07785 a2af783f5df577b34f1397f921e1457f 562 SMART SM00382 366 550 1.2E-14 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS07785 a2af783f5df577b34f1397f921e1457f 562 Gene3D G3DSA:3.40.50.300 342 552 7.1E-59 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS07785 a2af783f5df577b34f1397f921e1457f 562 Gene3D G3DSA:1.20.1560.10 12 323 4.0E-32 T 19-04-2016 APA12_RS07785 a2af783f5df577b34f1397f921e1457f 562 Pfam PF00005 ABC transporter 357 504 2.4E-30 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS07785 a2af783f5df577b34f1397f921e1457f 562 Pfam PF00664 ABC transporter transmembrane region 28 289 4.3E-17 T 19-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APA12_RS07785 a2af783f5df577b34f1397f921e1457f 562 PANTHER PTHR24221:SF261 23 533 1.3E-113 T 19-04-2016 APA12_RS07785 a2af783f5df577b34f1397f921e1457f 562 PANTHER PTHR24221 23 533 1.3E-113 T 19-04-2016 APA12_RS02890 d7cd544d104389b6a72c9f6c5a13a098 383 SUPERFAMILY SSF51569 48 330 7.94E-13 T 19-04-2016 APA12_RS02890 d7cd544d104389b6a72c9f6c5a13a098 383 Pfam PF06187 Protein of unknown function (DUF993) 4 381 2.9E-180 T 19-04-2016 IPR009334 Protein of unknown function DUF993 APA12_RS02890 d7cd544d104389b6a72c9f6c5a13a098 383 Gene3D G3DSA:3.20.20.70 52 321 5.0E-9 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS04080 db28057dc5509becc16973a63b3030e4 193 Pfam PF14016 Protein of unknown function (DUF4232) 53 169 1.9E-11 T 19-04-2016 IPR025326 Protein of unknown function DUF4232 APA12_RS04955 46977753f5d8358fe51dc0633063c654 363 Pfam PF04748 Divergent polysaccharide deacetylase 119 329 1.1E-53 T 19-04-2016 IPR006837 Protein of unknown function DUF610, YibQ APA12_RS04955 46977753f5d8358fe51dc0633063c654 363 Gene3D G3DSA:3.20.20.370 102 333 1.9E-50 T 19-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 APA12_RS04955 46977753f5d8358fe51dc0633063c654 363 SUPERFAMILY SSF88713 114 329 3.45E-35 T 19-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 APA12_RS04955 46977753f5d8358fe51dc0633063c654 363 PANTHER PTHR30105 101 346 2.9E-23 T 19-04-2016 APA12_RS08150 3c1d4944106e05fa316150c57e435be4 364 Pfam PF03739 Predicted permease YjgP/YjgQ family 14 360 1.3E-49 T 19-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 APA12_RS08150 3c1d4944106e05fa316150c57e435be4 364 PANTHER PTHR33529 6 362 8.5E-40 T 19-04-2016 APA12_RS08150 3c1d4944106e05fa316150c57e435be4 364 PANTHER PTHR33529:SF1 6 362 8.5E-40 T 19-04-2016 APA12_RS08805 e0fa72654eef6768a85999350f2a899f 485 PANTHER PTHR11814:SF76 9 479 3.7E-219 T 19-04-2016 APA12_RS08805 e0fa72654eef6768a85999350f2a899f 485 SUPERFAMILY SSF52091 393 484 2.16E-12 T 19-04-2016 IPR002645 STAS domain APA12_RS08805 e0fa72654eef6768a85999350f2a899f 485 Gene3D G3DSA:3.30.750.24 394 484 9.7E-9 T 19-04-2016 IPR002645 STAS domain APA12_RS08805 e0fa72654eef6768a85999350f2a899f 485 Pfam PF01740 STAS domain 402 481 2.8E-5 T 19-04-2016 IPR002645 STAS domain APA12_RS08805 e0fa72654eef6768a85999350f2a899f 485 Pfam PF00916 Sulfate permease family 153 355 1.4E-27 T 19-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 APA12_RS08805 e0fa72654eef6768a85999350f2a899f 485 Pfam PF00916 Sulfate permease family 17 144 5.3E-20 T 19-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 APA12_RS08805 e0fa72654eef6768a85999350f2a899f 485 PANTHER PTHR11814 9 479 3.7E-219 T 19-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 APA12_RS07405 c3c9ce89c2725b0cf9c2576e3db9776a 483 PANTHER PTHR34219:SF3 2 474 1.8E-77 T 19-04-2016 APA12_RS07405 c3c9ce89c2725b0cf9c2576e3db9776a 483 PANTHER PTHR34219 2 474 1.8E-77 T 19-04-2016 APA12_RS07405 c3c9ce89c2725b0cf9c2576e3db9776a 483 Pfam PF03929 PepSY-associated TM region 13 378 3.1E-46 T 19-04-2016 IPR005625 PepSY-associated TM protein APA12_RS11665 52971bb933b3d76090e47f9ce6e1ab4b 279 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 4 265 1.3E-72 T 19-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 APA12_RS11665 52971bb933b3d76090e47f9ce6e1ab4b 279 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 141 153 - T 19-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 APA12_RS11665 52971bb933b3d76090e47f9ce6e1ab4b 279 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 9 266 18.715 T 19-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 APA12_RS11665 52971bb933b3d76090e47f9ce6e1ab4b 279 PANTHER PTHR30589 1 264 7.9E-88 T 19-04-2016 APA12_RS11665 52971bb933b3d76090e47f9ce6e1ab4b 279 PANTHER PTHR30589:SF0 1 264 7.9E-88 T 19-04-2016 APA12_RS11665 52971bb933b3d76090e47f9ce6e1ab4b 279 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 12 261 4.9E-76 T 19-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 APA12_RS09040 012ef8523973f0624cbdb3184ad846e2 222 SUPERFAMILY SSF53474 4 218 1.71E-39 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS09040 012ef8523973f0624cbdb3184ad846e2 222 Pfam PF01738 Dienelactone hydrolase family 28 218 1.8E-40 T 19-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 APA12_RS09040 012ef8523973f0624cbdb3184ad846e2 222 PANTHER PTHR17630:SF42 30 221 1.2E-36 T 19-04-2016 APA12_RS09040 012ef8523973f0624cbdb3184ad846e2 222 Gene3D G3DSA:3.40.50.1820 6 219 4.6E-44 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS09040 012ef8523973f0624cbdb3184ad846e2 222 PANTHER PTHR17630 30 221 1.2E-36 T 19-04-2016 APA12_RS04705 6311d3e8e911615f2c11cbe88a65d4b8 227 PANTHER PTHR11229 1 219 8.3E-113 T 19-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04705 6311d3e8e911615f2c11cbe88a65d4b8 227 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 205 1.2E-85 T 19-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04705 6311d3e8e911615f2c11cbe88a65d4b8 227 Gene3D G3DSA:4.10.960.10 77 158 3.4E-30 T 19-04-2016 APA12_RS04705 6311d3e8e911615f2c11cbe88a65d4b8 227 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 208 36.606 T 19-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04705 6311d3e8e911615f2c11cbe88a65d4b8 227 Pfam PF00297 Ribosomal protein L3 65 182 9.6E-14 T 19-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04705 6311d3e8e911615f2c11cbe88a65d4b8 227 Gene3D G3DSA:2.40.30.10 159 211 2.5E-9 T 19-04-2016 APA12_RS04705 6311d3e8e911615f2c11cbe88a65d4b8 227 Gene3D G3DSA:2.40.30.10 3 33 2.5E-9 T 19-04-2016 APA12_RS04705 6311d3e8e911615f2c11cbe88a65d4b8 227 SUPERFAMILY SSF50447 1 213 6.89E-81 T 19-04-2016 IPR009000 Translation protein, beta-barrel domain APA12_RS04705 6311d3e8e911615f2c11cbe88a65d4b8 227 ProSitePatterns PS00474 Ribosomal protein L3 signature. 102 125 - T 19-04-2016 IPR019926 Ribosomal protein L3, conserved site APA12_RS03440 64cfa7a0bb556bde7f01f39e122a9dd4 368 Gene3D G3DSA:2.60.450.10 215 354 6.9E-16 T 19-04-2016 APA12_RS03440 64cfa7a0bb556bde7f01f39e122a9dd4 368 Gene3D G3DSA:2.60.450.10 51 89 1.7E-12 T 19-04-2016 APA12_RS03440 64cfa7a0bb556bde7f01f39e122a9dd4 368 Gene3D G3DSA:2.60.450.10 159 213 1.7E-12 T 19-04-2016 APA12_RS03440 64cfa7a0bb556bde7f01f39e122a9dd4 368 Pfam PF03968 OstA-like protein 55 221 5.4E-7 T 19-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal APA12_RS01540 7fd975c815951acd77e59ce06a110e60 162 Gene3D G3DSA:1.10.10.10 11 89 6.1E-27 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS01540 7fd975c815951acd77e59ce06a110e60 162 PANTHER PTHR33202 5 140 9.5E-35 T 19-04-2016 APA12_RS01540 7fd975c815951acd77e59ce06a110e60 162 SUPERFAMILY SSF46785 11 141 7.71E-37 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS01540 7fd975c815951acd77e59ce06a110e60 162 Pfam PF01475 Ferric uptake regulator family 18 137 3.6E-34 T 19-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 APA12_RS05610 1ab89c38177d0cb5395d02fcc5cf3e6f 335 Gene3D G3DSA:3.40.50.300 67 238 1.6E-23 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05610 1ab89c38177d0cb5395d02fcc5cf3e6f 335 Pfam PF07728 AAA domain (dynein-related subfamily) 77 201 2.5E-10 T 19-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 APA12_RS05610 1ab89c38177d0cb5395d02fcc5cf3e6f 335 SUPERFAMILY SSF52540 52 295 1.6E-27 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05610 1ab89c38177d0cb5395d02fcc5cf3e6f 335 TIGRFAM TIGR01650 PD_CobS: cobaltochelatase, CobS subunit 20 328 1.2E-169 T 19-04-2016 IPR006537 Cobaltochelatase subunit CobS KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 APA12_RS05610 1ab89c38177d0cb5395d02fcc5cf3e6f 335 Pfam PF12556 Cobaltochelatase CobS subunit N terminal 20 50 1.7E-17 T 19-04-2016 IPR025865 Cobaltochelatase subunit CobS N-terminal domain KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 APA12_RS11200 ae5e38dc70d6c08eb386df2e2db8b73c 384 PANTHER PTHR10909 19 329 1.4E-77 T 19-04-2016 APA12_RS11200 ae5e38dc70d6c08eb386df2e2db8b73c 384 Gene3D G3DSA:2.40.110.10 118 201 1.2E-17 T 19-04-2016 APA12_RS11200 ae5e38dc70d6c08eb386df2e2db8b73c 384 SUPERFAMILY SSF56645 22 208 2.62E-22 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 APA12_RS11200 ae5e38dc70d6c08eb386df2e2db8b73c 384 Gene3D G3DSA:1.20.140.10 202 377 5.8E-35 T 19-04-2016 APA12_RS11200 ae5e38dc70d6c08eb386df2e2db8b73c 384 PANTHER PTHR10909:SF279 19 329 1.4E-77 T 19-04-2016 APA12_RS11200 ae5e38dc70d6c08eb386df2e2db8b73c 384 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 233 362 7.7E-22 T 19-04-2016 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain APA12_RS11200 ae5e38dc70d6c08eb386df2e2db8b73c 384 SUPERFAMILY SSF47203 226 376 4.54E-12 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APA12_RS11200 ae5e38dc70d6c08eb386df2e2db8b73c 384 Gene3D G3DSA:1.10.540.10 18 114 3.4E-28 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 APA12_RS11200 ae5e38dc70d6c08eb386df2e2db8b73c 384 PIRSF PIRSF016578 3 381 1.4E-83 T 19-04-2016 APA12_RS08880 15e629894dc0952c1a25ebc3d897af80 324 SUPERFAMILY SSF53448 6 238 4.13E-32 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS08880 15e629894dc0952c1a25ebc3d897af80 324 PANTHER PTHR10859 10 323 6.0E-148 T 19-04-2016 APA12_RS08880 15e629894dc0952c1a25ebc3d897af80 324 Gene3D G3DSA:3.90.550.10 7 136 7.7E-22 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS08880 15e629894dc0952c1a25ebc3d897af80 324 Pfam PF00535 Glycosyl transferase family 2 10 175 1.7E-29 T 19-04-2016 IPR001173 Glycosyltransferase 2-like APA12_RS08880 15e629894dc0952c1a25ebc3d897af80 324 PANTHER PTHR10859:SF81 10 323 6.0E-148 T 19-04-2016 APA12_RS09435 ee602a08460ef850888b45b75f584ff1 438 Pfam PF07642 Putative beta-barrel porin-2, OmpL-like. bbp2 52 438 8.4E-52 T 19-04-2016 IPR011486 Putative beta-barrel porin-2, OmpL-like. bbp2 APA12_RS07485 c58124f4f648e0ba6e45bced51ef42b1 174 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 9 167 1.0E-37 T 19-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 APA12_RS07485 c58124f4f648e0ba6e45bced51ef42b1 174 PANTHER PTHR40072 8 165 2.4E-16 T 19-04-2016 APA12_RS07485 c58124f4f648e0ba6e45bced51ef42b1 174 Gene3D G3DSA:3.40.50.300 9 169 1.3E-48 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS07485 c58124f4f648e0ba6e45bced51ef42b1 174 SUPERFAMILY SSF52540 9 165 1.18E-18 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS07485 c58124f4f648e0ba6e45bced51ef42b1 174 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 9 139 5.6E-43 T 19-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 APA12_RS00475 6da57f7ab33989748519fa9683300f52 110 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 20 93 6.4E-16 T 19-04-2016 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 APA12_RS00475 6da57f7ab33989748519fa9683300f52 110 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 13 108 5.5E-33 T 19-04-2016 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 APA12_RS00475 6da57f7ab33989748519fa9683300f52 110 PANTHER PTHR36835 1 110 2.2E-29 T 19-04-2016 APA12_RS04095 696b9a5550434f0b90a5ee60a506d28d 216 SUPERFAMILY SSF55469 3 214 1.57E-58 T 19-04-2016 IPR000415 Nitroreductase-like GO:0016491 APA12_RS04095 696b9a5550434f0b90a5ee60a506d28d 216 PANTHER PTHR23026:SF101 2 216 4.0E-67 T 19-04-2016 APA12_RS04095 696b9a5550434f0b90a5ee60a506d28d 216 Gene3D G3DSA:3.40.109.10 3 214 8.5E-57 T 19-04-2016 IPR000415 Nitroreductase-like GO:0016491 APA12_RS04095 696b9a5550434f0b90a5ee60a506d28d 216 Pfam PF00881 Nitroreductase family 9 192 1.1E-24 T 19-04-2016 IPR029479 Nitroreductase APA12_RS04095 696b9a5550434f0b90a5ee60a506d28d 216 PANTHER PTHR23026 2 216 4.0E-67 T 19-04-2016 APA12_RS01935 2e76c2ca5588cf7ceb896ab48d4ce38b 467 SUPERFAMILY SSF46548 299 390 4.45E-16 T 19-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APA12_RS01935 2e76c2ca5588cf7ceb896ab48d4ce38b 467 Gene3D G3DSA:3.40.50.10420 63 126 6.6E-40 T 19-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain APA12_RS01935 2e76c2ca5588cf7ceb896ab48d4ce38b 467 Gene3D G3DSA:3.40.50.10420 188 286 6.6E-40 T 19-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain APA12_RS01935 2e76c2ca5588cf7ceb896ab48d4ce38b 467 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 306 317 - T 19-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APA12_RS01935 2e76c2ca5588cf7ceb896ab48d4ce38b 467 Pfam PF13183 4Fe-4S dicluster domain 304 369 3.3E-10 T 19-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APA12_RS01935 2e76c2ca5588cf7ceb896ab48d4ce38b 467 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 68 287 4.5E-37 T 19-04-2016 IPR003741 LUD domain APA12_RS01935 2e76c2ca5588cf7ceb896ab48d4ce38b 467 PANTHER PTHR32479:SF10 12 458 1.1E-171 T 19-04-2016 APA12_RS01935 2e76c2ca5588cf7ceb896ab48d4ce38b 467 SUPERFAMILY SSF100950 133 288 2.76E-33 T 19-04-2016 APA12_RS01935 2e76c2ca5588cf7ceb896ab48d4ce38b 467 SUPERFAMILY SSF100950 62 87 2.76E-33 T 19-04-2016 APA12_RS01935 2e76c2ca5588cf7ceb896ab48d4ce38b 467 PANTHER PTHR32479 12 458 1.1E-171 T 19-04-2016 APA12_RS01935 2e76c2ca5588cf7ceb896ab48d4ce38b 467 Gene3D G3DSA:1.10.1060.10 287 387 5.8E-12 T 19-04-2016 APA12_RS11380 f09e56ae938545c68f21cd2074b0ba1d 349 Pfam PF02277 Phosphoribosyltransferase 28 345 5.2E-106 T 19-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 APA12_RS11380 f09e56ae938545c68f21cd2074b0ba1d 349 SUPERFAMILY SSF52733 22 346 1.19E-98 T 19-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 APA12_RS11380 f09e56ae938545c68f21cd2074b0ba1d 349 Gene3D G3DSA:1.10.1610.10 17 88 1.2E-28 T 19-04-2016 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 APA12_RS11380 f09e56ae938545c68f21cd2074b0ba1d 349 PANTHER PTHR21712 25 348 5.3E-80 T 19-04-2016 APA12_RS11380 f09e56ae938545c68f21cd2074b0ba1d 349 PANTHER PTHR21712:SF4 25 348 5.3E-80 T 19-04-2016 APA12_RS11380 f09e56ae938545c68f21cd2074b0ba1d 349 Gene3D G3DSA:3.40.50.10210 89 328 2.2E-80 T 19-04-2016 APA12_RS11380 f09e56ae938545c68f21cd2074b0ba1d 349 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 31 345 3.9E-105 T 19-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 APA12_RS10570 eea56c3c13d4a0448a8d7d84594466b6 875 Pfam PF00128 Alpha amylase, catalytic domain 27 120 4.9E-13 T 19-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APA12_RS10570 eea56c3c13d4a0448a8d7d84594466b6 875 TIGRFAM TIGR02401 trehalose_TreY: malto-oligosyltrehalose synthase 6 869 8.6E-241 T 19-04-2016 IPR012767 Malto-oligosyltrehalose synthase MetaCyc: PWY-2661 APA12_RS10570 eea56c3c13d4a0448a8d7d84594466b6 875 Gene3D G3DSA:1.10.10.470 574 668 4.3E-23 T 19-04-2016 IPR013797 Maltooligosyl trehalose synthase, N-terminal MetaCyc: PWY-2661 APA12_RS10570 eea56c3c13d4a0448a8d7d84594466b6 875 SMART SM00642 13 454 2.4E-4 T 19-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APA12_RS10570 eea56c3c13d4a0448a8d7d84594466b6 875 Gene3D G3DSA:3.30.1590.10 217 255 2.8E-37 T 19-04-2016 APA12_RS10570 eea56c3c13d4a0448a8d7d84594466b6 875 Gene3D G3DSA:3.30.1590.10 98 180 2.8E-37 T 19-04-2016 APA12_RS10570 eea56c3c13d4a0448a8d7d84594466b6 875 PANTHER PTHR10357:SF166 672 875 1.9E-122 T 19-04-2016 APA12_RS10570 eea56c3c13d4a0448a8d7d84594466b6 875 PANTHER PTHR10357:SF166 223 389 1.9E-122 T 19-04-2016 APA12_RS10570 eea56c3c13d4a0448a8d7d84594466b6 875 PANTHER PTHR10357:SF166 1 125 1.9E-122 T 19-04-2016 APA12_RS10570 eea56c3c13d4a0448a8d7d84594466b6 875 PANTHER PTHR10357 672 875 1.9E-122 T 19-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APA12_RS10570 eea56c3c13d4a0448a8d7d84594466b6 875 PANTHER PTHR10357 223 389 1.9E-122 T 19-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APA12_RS10570 eea56c3c13d4a0448a8d7d84594466b6 875 PANTHER PTHR10357 1 125 1.9E-122 T 19-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APA12_RS10570 eea56c3c13d4a0448a8d7d84594466b6 875 SUPERFAMILY SSF51445 6 138 4.52E-100 T 19-04-2016 IPR017853 Glycoside hydrolase superfamily APA12_RS10570 eea56c3c13d4a0448a8d7d84594466b6 875 SUPERFAMILY SSF51445 213 771 4.52E-100 T 19-04-2016 IPR017853 Glycoside hydrolase superfamily APA12_RS10570 eea56c3c13d4a0448a8d7d84594466b6 875 Gene3D G3DSA:3.20.20.80 7 97 7.6E-63 T 19-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APA12_RS10570 eea56c3c13d4a0448a8d7d84594466b6 875 Gene3D G3DSA:3.20.20.80 271 355 7.6E-63 T 19-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APA12_RS10570 eea56c3c13d4a0448a8d7d84594466b6 875 Gene3D G3DSA:3.20.20.80 680 801 7.6E-63 T 19-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APA12_RS10570 eea56c3c13d4a0448a8d7d84594466b6 875 Gene3D G3DSA:3.20.20.80 532 572 7.6E-63 T 19-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APA12_RS03630 571de43ba9ed83643d745060249e6ccf 260 Gene3D G3DSA:3.30.540.10 12 159 8.3E-43 T 19-04-2016 APA12_RS03630 571de43ba9ed83643d745060249e6ccf 260 Gene3D G3DSA:3.40.190.80 160 258 1.8E-33 T 19-04-2016 APA12_RS03630 571de43ba9ed83643d745060249e6ccf 260 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 218 232 - T 19-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 APA12_RS03630 571de43ba9ed83643d745060249e6ccf 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 90 106 5.6E-8 T 19-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APA12_RS03630 571de43ba9ed83643d745060249e6ccf 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 67 83 5.6E-8 T 19-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APA12_RS03630 571de43ba9ed83643d745060249e6ccf 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 45 65 5.6E-8 T 19-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APA12_RS03630 571de43ba9ed83643d745060249e6ccf 260 SUPERFAMILY SSF56655 12 254 1.96E-71 T 19-04-2016 APA12_RS03630 571de43ba9ed83643d745060249e6ccf 260 Pfam PF00459 Inositol monophosphatase family 13 248 1.2E-48 T 19-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APA12_RS03630 571de43ba9ed83643d745060249e6ccf 260 PANTHER PTHR20854:SF5 4 244 4.5E-69 T 19-04-2016 APA12_RS03630 571de43ba9ed83643d745060249e6ccf 260 PANTHER PTHR20854 4 244 4.5E-69 T 19-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APA12_RS03630 571de43ba9ed83643d745060249e6ccf 260 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 17 257 4.0E-74 T 19-04-2016 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 APA12_RS07520 3f4607d477208a4c939115553b61e6dd 360 PANTHER PTHR30005 4 341 3.3E-74 T 19-04-2016 APA12_RS07520 3f4607d477208a4c939115553b61e6dd 360 SUPERFAMILY SSF53067 143 331 1.9E-37 T 19-04-2016 APA12_RS07520 3f4607d477208a4c939115553b61e6dd 360 SUPERFAMILY SSF53067 14 134 8.02E-37 T 19-04-2016 APA12_RS07520 3f4607d477208a4c939115553b61e6dd 360 Gene3D G3DSA:3.30.420.150 141 331 6.8E-49 T 19-04-2016 APA12_RS07520 3f4607d477208a4c939115553b61e6dd 360 Gene3D G3DSA:3.30.420.40 10 132 2.4E-45 T 19-04-2016 APA12_RS07520 3f4607d477208a4c939115553b61e6dd 360 Pfam PF02541 Ppx/GppA phosphatase family 28 330 7.0E-49 T 19-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 APA12_RS07615 10891eb919980e40d536dcc207274c33 437 SUPERFAMILY SSF53335 125 427 8.44E-71 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS07615 10891eb919980e40d536dcc207274c33 437 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 410 427 1.3E-27 T 19-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APA12_RS07615 10891eb919980e40d536dcc207274c33 437 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 359 375 1.3E-27 T 19-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APA12_RS07615 10891eb919980e40d536dcc207274c33 437 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 241 251 1.3E-27 T 19-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APA12_RS07615 10891eb919980e40d536dcc207274c33 437 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 212 226 1.3E-27 T 19-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APA12_RS07615 10891eb919980e40d536dcc207274c33 437 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 309 321 1.3E-27 T 19-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APA12_RS07615 10891eb919980e40d536dcc207274c33 437 Gene3D G3DSA:3.30.70.1170 163 220 1.3E-13 T 19-04-2016 APA12_RS07615 10891eb919980e40d536dcc207274c33 437 Pfam PF01189 16S rRNA methyltransferase RsmB/F 237 425 8.1E-48 T 19-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APA12_RS07615 10891eb919980e40d536dcc207274c33 437 PANTHER PTHR22807 126 427 4.1E-99 T 19-04-2016 APA12_RS07615 10891eb919980e40d536dcc207274c33 437 Gene3D G3DSA:3.40.50.150 222 427 4.0E-53 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS07615 10891eb919980e40d536dcc207274c33 437 PANTHER PTHR22807:SF33 126 427 4.1E-99 T 19-04-2016 APA12_RS07615 10891eb919980e40d536dcc207274c33 437 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 308 319 - T 19-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APA12_RS12480 608068b96a2c3a640a69c121f4ea02dd 563 PANTHER PTHR33908:SF3 1 453 2.8E-48 T 19-04-2016 APA12_RS12480 608068b96a2c3a640a69c121f4ea02dd 563 PANTHER PTHR33908 1 453 2.8E-48 T 19-04-2016 APA12_RS12480 608068b96a2c3a640a69c121f4ea02dd 563 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 29 242 7.8E-9 T 19-04-2016 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 APA12_RS09710 f4ddc2c4b3dd51037ba5ae38caa2cfdc 199 PANTHER PTHR16301 3 196 5.6E-51 T 19-04-2016 IPR023582 Impact family APA12_RS09710 f4ddc2c4b3dd51037ba5ae38caa2cfdc 199 Pfam PF01205 Uncharacterized protein family UPF0029 16 118 3.6E-29 T 19-04-2016 IPR001498 Impact, N-terminal APA12_RS09710 f4ddc2c4b3dd51037ba5ae38caa2cfdc 199 SUPERFAMILY SSF54980 132 198 2.7E-9 T 19-04-2016 IPR009022 Elongation factor G, III-V domain APA12_RS09710 f4ddc2c4b3dd51037ba5ae38caa2cfdc 199 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 73 102 - T 19-04-2016 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site APA12_RS09710 f4ddc2c4b3dd51037ba5ae38caa2cfdc 199 Gene3D G3DSA:3.30.70.240 131 198 1.1E-9 T 19-04-2016 IPR000640 Translation elongation factor EFG, V domain APA12_RS09710 f4ddc2c4b3dd51037ba5ae38caa2cfdc 199 Gene3D G3DSA:3.30.230.30 5 122 4.1E-42 T 19-04-2016 IPR001498 Impact, N-terminal APA12_RS09710 f4ddc2c4b3dd51037ba5ae38caa2cfdc 199 SUPERFAMILY SSF54211 4 123 6.07E-37 T 19-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APA12_RS09710 f4ddc2c4b3dd51037ba5ae38caa2cfdc 199 Pfam PF09186 Domain of unknown function (DUF1949) 135 190 2.3E-7 T 19-04-2016 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal APA12_RS03740 2f946e90744903ae51caa53072dc05da 505 PANTHER PTHR22773:SF40 1 486 1.8E-169 T 19-04-2016 APA12_RS03740 2f946e90744903ae51caa53072dc05da 505 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 139 158 3.0E-40 T 19-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 APA12_RS03740 2f946e90744903ae51caa53072dc05da 505 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 238 262 3.0E-40 T 19-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 APA12_RS03740 2f946e90744903ae51caa53072dc05da 505 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 326 345 3.0E-40 T 19-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 APA12_RS03740 2f946e90744903ae51caa53072dc05da 505 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 169 193 3.0E-40 T 19-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 APA12_RS03740 2f946e90744903ae51caa53072dc05da 505 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 378 404 3.0E-40 T 19-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 APA12_RS03740 2f946e90744903ae51caa53072dc05da 505 PANTHER PTHR22773 1 486 1.8E-169 T 19-04-2016 APA12_RS03740 2f946e90744903ae51caa53072dc05da 505 Pfam PF00361 Proton-conducting membrane transporter 133 418 2.1E-73 T 19-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 APA12_RS03740 2f946e90744903ae51caa53072dc05da 505 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 6 484 4.1E-167 T 19-04-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 APA12_RS05805 448da770bccf1dfd24f89fbe80052ef8 292 PRINTS PR01438 Universal stress protein signature 4 22 1.7E-5 T 19-04-2016 IPR006015 Universal stress protein A APA12_RS05805 448da770bccf1dfd24f89fbe80052ef8 292 PRINTS PR01438 Universal stress protein signature 270 292 1.7E-5 T 19-04-2016 IPR006015 Universal stress protein A APA12_RS05805 448da770bccf1dfd24f89fbe80052ef8 292 PRINTS PR01438 Universal stress protein signature 252 264 1.7E-5 T 19-04-2016 IPR006015 Universal stress protein A APA12_RS05805 448da770bccf1dfd24f89fbe80052ef8 292 Gene3D G3DSA:3.40.50.620 172 292 1.5E-13 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS05805 448da770bccf1dfd24f89fbe80052ef8 292 Pfam PF00582 Universal stress protein family 172 291 4.2E-9 T 19-04-2016 IPR006016 UspA GO:0006950 APA12_RS05805 448da770bccf1dfd24f89fbe80052ef8 292 Gene3D G3DSA:3.40.50.620 1 84 1.6E-8 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS05805 448da770bccf1dfd24f89fbe80052ef8 292 SUPERFAMILY SSF52402 171 292 4.35E-17 T 19-04-2016 APA12_RS05805 448da770bccf1dfd24f89fbe80052ef8 292 SUPERFAMILY SSF52402 4 80 1.59E-6 T 19-04-2016 APA12_RS02455 99a9d5b6e4cf0454a77a25a1fe2eef42 166 Pfam PF07452 CHRD domain 51 150 3.5E-14 T 19-04-2016 IPR010895 CHRD APA12_RS02455 99a9d5b6e4cf0454a77a25a1fe2eef42 166 SMART SM00754 16 152 2.8E-14 T 19-04-2016 IPR010895 CHRD APA12_RS05310 13a35418db2928f549f2bd19f59e9db0 196 Pfam PF06242 Protein of unknown function (DUF1013) 35 171 4.4E-65 T 19-04-2016 IPR010421 Protein of unknown function DUF1013 APA12_RS04940 d8b6188a2f780b5feaed672ef2518940 401 SUPERFAMILY SSF111369 223 321 2.48E-12 T 19-04-2016 APA12_RS04940 d8b6188a2f780b5feaed672ef2518940 401 SUPERFAMILY SSF111369 72 131 5.23E-11 T 19-04-2016 APA12_RS04940 d8b6188a2f780b5feaed672ef2518940 401 Pfam PF00529 HlyD membrane-fusion protein of T1SS 52 369 1.6E-10 T 19-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APA12_RS04940 d8b6188a2f780b5feaed672ef2518940 401 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 76 323 1.0E-19 T 19-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APA12_RS04940 d8b6188a2f780b5feaed672ef2518940 401 Gene3D G3DSA:2.40.50.100 78 110 4.4E-21 T 19-04-2016 APA12_RS04940 d8b6188a2f780b5feaed672ef2518940 401 Gene3D G3DSA:2.40.50.100 247 279 4.4E-21 T 19-04-2016 APA12_RS04940 d8b6188a2f780b5feaed672ef2518940 401 PANTHER PTHR30386 39 378 2.8E-83 T 19-04-2016 APA12_RS04940 d8b6188a2f780b5feaed672ef2518940 401 PANTHER PTHR30386:SF7 39 378 2.8E-83 T 19-04-2016 APA12_RS01500 0321ee511310731a9d0413033796ec41 319 Pfam PF00892 EamA-like transporter family 9 143 2.9E-10 T 19-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APA12_RS01500 0321ee511310731a9d0413033796ec41 319 SUPERFAMILY SSF103481 213 309 1.31E-6 T 19-04-2016 APA12_RS01500 0321ee511310731a9d0413033796ec41 319 PANTHER PTHR12715 7 307 9.7E-81 T 19-04-2016 APA12_RS01500 0321ee511310731a9d0413033796ec41 319 PANTHER PTHR12715:SF21 7 307 9.7E-81 T 19-04-2016 APA12_RS04415 492f419d3488e76d849b6ba017a08a9e 369 Pfam PF13579 Glycosyl transferase 4-like domain 20 168 4.5E-23 T 19-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APA12_RS04415 492f419d3488e76d849b6ba017a08a9e 369 Gene3D G3DSA:3.40.50.2000 165 348 1.1E-33 T 19-04-2016 APA12_RS04415 492f419d3488e76d849b6ba017a08a9e 369 Gene3D G3DSA:3.40.50.2000 21 109 0.001 T 19-04-2016 APA12_RS04415 492f419d3488e76d849b6ba017a08a9e 369 PANTHER PTHR12526 11 367 4.2E-68 T 19-04-2016 APA12_RS04415 492f419d3488e76d849b6ba017a08a9e 369 Pfam PF00534 Glycosyl transferases group 1 183 348 8.7E-35 T 19-04-2016 IPR001296 Glycosyl transferase, family 1 APA12_RS04415 492f419d3488e76d849b6ba017a08a9e 369 SUPERFAMILY SSF53756 13 367 1.66E-86 T 19-04-2016 APA12_RS07800 94434b86035e49a2339c3c057a998a67 812 Pfam PF07715 TonB-dependent Receptor Plug Domain 109 207 1.6E-15 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS07800 94434b86035e49a2339c3c057a998a67 812 SUPERFAMILY SSF56935 73 811 1.05E-99 T 19-04-2016 APA12_RS07800 94434b86035e49a2339c3c057a998a67 812 Pfam PF00593 TonB dependent receptor 571 808 1.3E-22 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS07800 94434b86035e49a2339c3c057a998a67 812 PANTHER PTHR32552:SF8 402 492 2.6E-88 T 19-04-2016 IPR030148 Catecholate siderophore receptor Fiu GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 APA12_RS07800 94434b86035e49a2339c3c057a998a67 812 PANTHER PTHR32552:SF8 517 812 2.6E-88 T 19-04-2016 IPR030148 Catecholate siderophore receptor Fiu GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 APA12_RS07800 94434b86035e49a2339c3c057a998a67 812 PANTHER PTHR32552:SF8 101 363 2.6E-88 T 19-04-2016 IPR030148 Catecholate siderophore receptor Fiu GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 APA12_RS07800 94434b86035e49a2339c3c057a998a67 812 Gene3D G3DSA:2.40.170.20 222 812 1.9E-111 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS07800 94434b86035e49a2339c3c057a998a67 812 Gene3D G3DSA:2.170.130.10 74 216 3.5E-30 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS07800 94434b86035e49a2339c3c057a998a67 812 PANTHER PTHR32552 402 492 2.6E-88 T 19-04-2016 APA12_RS07800 94434b86035e49a2339c3c057a998a67 812 PANTHER PTHR32552 517 812 2.6E-88 T 19-04-2016 APA12_RS07800 94434b86035e49a2339c3c057a998a67 812 PANTHER PTHR32552 101 363 2.6E-88 T 19-04-2016 APA12_RS11235 03a9bd76aace5d27f4eebc1ed96123e0 262 SUPERFAMILY SSF161098 6 255 5.42E-43 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS11235 03a9bd76aace5d27f4eebc1ed96123e0 262 PANTHER PTHR30193:SF20 6 262 3.7E-49 T 19-04-2016 APA12_RS11235 03a9bd76aace5d27f4eebc1ed96123e0 262 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 249 7.1E-11 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS11235 03a9bd76aace5d27f4eebc1ed96123e0 262 Gene3D G3DSA:1.10.3720.10 8 257 1.8E-44 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS11235 03a9bd76aace5d27f4eebc1ed96123e0 262 PANTHER PTHR30193 6 262 3.7E-49 T 19-04-2016 APA12_RS07345 94ffa7e33d29551fc84294f2af9136f5 252 PANTHER PTHR21091 1 168 3.8E-37 T 19-04-2016 APA12_RS07345 94ffa7e33d29551fc84294f2af9136f5 252 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 213 2.9E-32 T 19-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 APA12_RS07345 94ffa7e33d29551fc84294f2af9136f5 252 Gene3D G3DSA:3.30.950.10 119 227 3.5E-9 T 19-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 APA12_RS07345 94ffa7e33d29551fc84294f2af9136f5 252 SUPERFAMILY SSF53790 1 241 1.44E-48 T 19-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 APA12_RS07345 94ffa7e33d29551fc84294f2af9136f5 252 Gene3D G3DSA:3.40.1010.10 2 118 3.7E-24 T 19-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 APA12_RS07345 94ffa7e33d29551fc84294f2af9136f5 252 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 5 247 4.5E-81 T 19-04-2016 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 APA12_RS07345 94ffa7e33d29551fc84294f2af9136f5 252 PANTHER PTHR21091:SF9 1 168 3.8E-37 T 19-04-2016 APA12_RS05300 c05f22600d2b77c634c80d082d7c246c 68 Pfam PF04325 Protein of unknown function (DUF465) 13 58 2.6E-13 T 19-04-2016 IPR007420 Protein of unknown function DUF465 APA12_RS04700 b065d3e5d5e5bc392dc4f840fbd3a2f8 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 4.8E-47 T 19-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APA12_RS04700 b065d3e5d5e5bc392dc4f840fbd3a2f8 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 2.8E-18 T 19-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APA12_RS04700 b065d3e5d5e5bc392dc4f840fbd3a2f8 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 2.8E-18 T 19-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APA12_RS04700 b065d3e5d5e5bc392dc4f840fbd3a2f8 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 2.8E-18 T 19-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APA12_RS04700 b065d3e5d5e5bc392dc4f840fbd3a2f8 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 8.5E-38 T 19-04-2016 IPR027486 Ribosomal protein S10 domain APA12_RS04700 b065d3e5d5e5bc392dc4f840fbd3a2f8 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 19-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04700 b065d3e5d5e5bc392dc4f840fbd3a2f8 102 SUPERFAMILY SSF54999 6 102 5.89E-40 T 19-04-2016 IPR027486 Ribosomal protein S10 domain APA12_RS04700 b065d3e5d5e5bc392dc4f840fbd3a2f8 102 Gene3D G3DSA:3.30.70.600 3 102 4.4E-46 T 19-04-2016 IPR027486 Ribosomal protein S10 domain APA12_RS04700 b065d3e5d5e5bc392dc4f840fbd3a2f8 102 PANTHER PTHR11700 1 102 1.4E-54 T 19-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APA12_RS04700 b065d3e5d5e5bc392dc4f840fbd3a2f8 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.699 T 19-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APA12_RS04700 b065d3e5d5e5bc392dc4f840fbd3a2f8 102 SMART SM01403 7 101 3.2E-60 T 19-04-2016 IPR027486 Ribosomal protein S10 domain APA12_RS13545 768d896e41c52b39041f210881dbc18e 410 PANTHER PTHR23517 1 403 1.5E-79 T 19-04-2016 APA12_RS13545 768d896e41c52b39041f210881dbc18e 410 Pfam PF07690 Major Facilitator Superfamily 27 315 1.3E-16 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APA12_RS13545 768d896e41c52b39041f210881dbc18e 410 SUPERFAMILY SSF103473 20 405 1.7E-39 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS13545 768d896e41c52b39041f210881dbc18e 410 PANTHER PTHR23517:SF4 1 403 1.5E-79 T 19-04-2016 APA12_RS13545 768d896e41c52b39041f210881dbc18e 410 Gene3D G3DSA:1.20.1250.20 19 200 3.6E-17 T 19-04-2016 APA12_RS13545 768d896e41c52b39041f210881dbc18e 410 Gene3D G3DSA:1.20.1250.20 231 403 1.4E-13 T 19-04-2016 APA12_RS07145 292bd9d9f0f08a5d4068dc8d5a1dc761 479 PANTHER PTHR40254:SF1 7 478 2.9E-48 T 19-04-2016 APA12_RS07145 292bd9d9f0f08a5d4068dc8d5a1dc761 479 Pfam PF13454 FAD-NAD(P)-binding 11 163 1.4E-33 T 19-04-2016 APA12_RS07145 292bd9d9f0f08a5d4068dc8d5a1dc761 479 Gene3D G3DSA:3.50.50.60 202 235 4.2E-4 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS07145 292bd9d9f0f08a5d4068dc8d5a1dc761 479 Gene3D G3DSA:3.50.50.60 317 376 4.2E-4 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS07145 292bd9d9f0f08a5d4068dc8d5a1dc761 479 SUPERFAMILY SSF51905 5 238 1.81E-23 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS07145 292bd9d9f0f08a5d4068dc8d5a1dc761 479 PANTHER PTHR40254 7 478 2.9E-48 T 19-04-2016 APA12_RS07145 292bd9d9f0f08a5d4068dc8d5a1dc761 479 Gene3D G3DSA:3.50.50.60 8 163 2.3E-16 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS10560 5c576aabe5407305cbd4e56a920cffe0 453 Gene3D G3DSA:3.90.1300.10 10 452 9.0E-110 T 19-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APA12_RS10560 5c576aabe5407305cbd4e56a920cffe0 453 SUPERFAMILY SSF75304 6 451 4.97E-109 T 19-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APA12_RS10560 5c576aabe5407305cbd4e56a920cffe0 453 Pfam PF01425 Amidase 25 440 4.0E-80 T 19-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APA12_RS10560 5c576aabe5407305cbd4e56a920cffe0 453 PANTHER PTHR11895:SF73 4 453 4.6E-113 T 19-04-2016 APA12_RS10560 5c576aabe5407305cbd4e56a920cffe0 453 PANTHER PTHR11895 4 453 4.6E-113 T 19-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APA12_RS01910 4dc1e6cf5ccb2bc107f07aa010d1977d 268 SUPERFAMILY SSF117856 35 266 3.66E-77 T 19-04-2016 APA12_RS01910 4dc1e6cf5ccb2bc107f07aa010d1977d 268 Pfam PF03306 Alpha-acetolactate decarboxylase 37 254 3.9E-82 T 19-04-2016 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939|UniPathway: UPA00626 APA12_RS01910 4dc1e6cf5ccb2bc107f07aa010d1977d 268 PIRSF PIRSF001332 10 267 1.2E-95 T 19-04-2016 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939|UniPathway: UPA00626 APA12_RS01910 4dc1e6cf5ccb2bc107f07aa010d1977d 268 PANTHER PTHR35524 35 267 6.6E-87 T 19-04-2016 APA12_RS01910 4dc1e6cf5ccb2bc107f07aa010d1977d 268 Gene3D G3DSA:3.30.1330.80 113 232 5.6E-44 T 19-04-2016 APA12_RS01910 4dc1e6cf5ccb2bc107f07aa010d1977d 268 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 35 266 1.2E-84 T 19-04-2016 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939|UniPathway: UPA00626 APA12_RS13095 fc3baf2ad50cc30cccd6f5709a8311e2 372 Pfam PF00534 Glycosyl transferases group 1 191 346 1.6E-28 T 19-04-2016 IPR001296 Glycosyl transferase, family 1 APA12_RS13095 fc3baf2ad50cc30cccd6f5709a8311e2 372 Gene3D G3DSA:3.40.50.2000 192 346 2.1E-23 T 19-04-2016 APA12_RS13095 fc3baf2ad50cc30cccd6f5709a8311e2 372 SUPERFAMILY SSF53756 16 368 9.94E-59 T 19-04-2016 APA12_RS13095 fc3baf2ad50cc30cccd6f5709a8311e2 372 PANTHER PTHR12526 7 357 3.6E-42 T 19-04-2016 APA12_RS11960 f2436ace4bf18fe5d92f432e390a8807 148 SUPERFAMILY SSF54197 20 144 2.76E-15 T 19-04-2016 IPR011146 HIT-like domain GO:0003824 APA12_RS11960 f2436ace4bf18fe5d92f432e390a8807 148 Gene3D G3DSA:3.30.428.10 16 143 9.0E-18 T 19-04-2016 IPR011146 HIT-like domain GO:0003824 APA12_RS04915 78bce4de7960a0f405032f4c84ec82bc 328 PANTHER PTHR33608 31 327 5.8E-44 T 19-04-2016 APA12_RS04915 78bce4de7960a0f405032f4c84ec82bc 328 SUPERFAMILY SSF53300 119 261 2.96E-5 T 19-04-2016 IPR002035 von Willebrand factor, type A APA12_RS04915 78bce4de7960a0f405032f4c84ec82bc 328 PANTHER PTHR33608:SF2 31 327 5.8E-44 T 19-04-2016 APA12_RS04915 78bce4de7960a0f405032f4c84ec82bc 328 Pfam PF01882 Protein of unknown function DUF58 81 166 1.8E-15 T 19-04-2016 IPR002881 Domain of unknown function DUF58 APA12_RS07245 f6ced8d176df802ead4c1176da4cf695 461 Pfam PF13701 Transposase DDE domain group 1 13 458 4.2E-165 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS07245 f6ced8d176df802ead4c1176da4cf695 461 SUPERFAMILY SSF53098 158 398 1.14E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS00935 a3e778ead115a7d777b285ec995bd027 371 Gene3D G3DSA:3.40.50.300 24 232 4.1E-28 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS00935 a3e778ead115a7d777b285ec995bd027 371 SUPERFAMILY SSF52540 28 247 1.68E-27 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS00935 a3e778ead115a7d777b285ec995bd027 371 PANTHER PTHR24220 91 255 3.5E-25 T 19-04-2016 APA12_RS00935 a3e778ead115a7d777b285ec995bd027 371 SUPERFAMILY SSF50331 243 366 1.28E-6 T 19-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APA12_RS00935 a3e778ead115a7d777b285ec995bd027 371 PANTHER PTHR24220:SF524 91 255 3.5E-25 T 19-04-2016 APA12_RS00935 a3e778ead115a7d777b285ec995bd027 371 Pfam PF00005 ABC transporter 25 167 3.8E-5 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS11965 5fb8f68a92a37586cf972362c10683ae 187 PANTHER PTHR30037:SF4 7 186 4.4E-89 T 19-04-2016 APA12_RS11965 5fb8f68a92a37586cf972362c10683ae 187 Pfam PF03352 Methyladenine glycosylase 10 182 3.3E-71 T 19-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 APA12_RS11965 5fb8f68a92a37586cf972362c10683ae 187 Gene3D G3DSA:1.10.340.30 6 183 5.7E-74 T 19-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APA12_RS11965 5fb8f68a92a37586cf972362c10683ae 187 SUPERFAMILY SSF48150 6 186 8.24E-69 T 19-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APA12_RS11965 5fb8f68a92a37586cf972362c10683ae 187 PANTHER PTHR30037 7 186 4.4E-89 T 19-04-2016 APA12_RS04685 c9f789b25118021a8c2be86f2eac6b54 123 PANTHER PTHR11652 1 116 2.9E-70 T 19-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04685 c9f789b25118021a8c2be86f2eac6b54 123 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.846 T 19-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APA12_RS04685 c9f789b25118021a8c2be86f2eac6b54 123 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 19-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04685 c9f789b25118021a8c2be86f2eac6b54 123 PIRSF PIRSF002133 1 123 8.7E-54 T 19-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04685 c9f789b25118021a8c2be86f2eac6b54 123 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 7.9E-66 T 19-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APA12_RS04685 c9f789b25118021a8c2be86f2eac6b54 123 Pfam PF00164 Ribosomal protein S12/S23 11 123 8.1E-42 T 19-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04685 c9f789b25118021a8c2be86f2eac6b54 123 PRINTS PR01034 Ribosomal protein S12 signature 77 94 2.6E-59 T 19-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APA12_RS04685 c9f789b25118021a8c2be86f2eac6b54 123 PRINTS PR01034 Ribosomal protein S12 signature 27 42 2.6E-59 T 19-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APA12_RS04685 c9f789b25118021a8c2be86f2eac6b54 123 PRINTS PR01034 Ribosomal protein S12 signature 42 57 2.6E-59 T 19-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APA12_RS04685 c9f789b25118021a8c2be86f2eac6b54 123 PRINTS PR01034 Ribosomal protein S12 signature 110 122 2.6E-59 T 19-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APA12_RS04685 c9f789b25118021a8c2be86f2eac6b54 123 PRINTS PR01034 Ribosomal protein S12 signature 94 110 2.6E-59 T 19-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APA12_RS04685 c9f789b25118021a8c2be86f2eac6b54 123 PRINTS PR01034 Ribosomal protein S12 signature 58 77 2.6E-59 T 19-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APA12_RS04685 c9f789b25118021a8c2be86f2eac6b54 123 Gene3D G3DSA:2.40.50.140 1 123 1.6E-64 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS04685 c9f789b25118021a8c2be86f2eac6b54 123 SUPERFAMILY SSF50249 2 123 2.14E-51 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS11310 9b4a836117613a3dac6b6cad63f6db8d 249 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 15 224 2.4E-92 T 19-04-2016 IPR014164 TonB-system energizer ExbB type-1 GO:0006810|GO:0016020 APA12_RS11310 9b4a836117613a3dac6b6cad63f6db8d 249 Pfam PF01618 MotA/TolQ/ExbB proton channel family 99 210 1.0E-33 T 19-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 APA12_RS11310 9b4a836117613a3dac6b6cad63f6db8d 249 PANTHER PTHR30572:SF11 7 246 9.0E-46 T 19-04-2016 APA12_RS11310 9b4a836117613a3dac6b6cad63f6db8d 249 PANTHER PTHR30572 7 246 9.0E-46 T 19-04-2016 APA12_RS10865 222be265120c427c229b2b37c6f0e00c 270 PANTHER PTHR24220 11 258 8.8E-58 T 19-04-2016 APA12_RS10865 222be265120c427c229b2b37c6f0e00c 270 SUPERFAMILY SSF52540 11 241 4.64E-51 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS10865 222be265120c427c229b2b37c6f0e00c 270 Gene3D G3DSA:3.40.50.300 12 259 1.3E-53 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS10865 222be265120c427c229b2b37c6f0e00c 270 Pfam PF00005 ABC transporter 33 178 6.5E-23 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS10865 222be265120c427c229b2b37c6f0e00c 270 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APA12_RS10865 222be265120c427c229b2b37c6f0e00c 270 PANTHER PTHR24220:SF73 11 258 8.8E-58 T 19-04-2016 APA12_RS10865 222be265120c427c229b2b37c6f0e00c 270 SMART SM00382 35 260 4.1E-13 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS06100 7ef1ff271205d87900c85cb1d1ce0cf8 203 PANTHER PTHR30060 14 193 3.7E-33 T 19-04-2016 APA12_RS06100 7ef1ff271205d87900c85cb1d1ce0cf8 203 Pfam PF03741 Integral membrane protein TerC family 18 192 1.0E-41 T 19-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 APA12_RS06100 7ef1ff271205d87900c85cb1d1ce0cf8 203 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 15 192 1.6E-59 T 19-04-2016 IPR022301 Integral membrane protein YjbE APA12_RS07465 8dfeacb53a27fba043584733e9d0fb34 196 Pfam PF02659 Putative manganese efflux pump 32 187 4.1E-48 T 19-04-2016 IPR003810 Putative manganese efflux pump APA12_RS07465 8dfeacb53a27fba043584733e9d0fb34 196 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 3 190 23.022 T 19-04-2016 IPR022929 Putative manganese efflux pump MntP APA12_RS07465 8dfeacb53a27fba043584733e9d0fb34 196 PANTHER PTHR35529 3 194 1.3E-56 T 19-04-2016 APA12_RS00040 1442cc79a680bf2116c6daf5023282eb 61 Pfam PF03966 Trm112p-like protein 8 47 2.4E-9 T 19-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 APA12_RS00040 1442cc79a680bf2116c6daf5023282eb 61 Gene3D G3DSA:2.20.25.10 14 60 3.4E-26 T 19-04-2016 APA12_RS00040 1442cc79a680bf2116c6daf5023282eb 61 SUPERFAMILY SSF158997 7 60 1.83E-20 T 19-04-2016 APA12_RS00040 1442cc79a680bf2116c6daf5023282eb 61 PANTHER PTHR33505 6 60 1.1E-27 T 19-04-2016 APA12_RS00040 1442cc79a680bf2116c6daf5023282eb 61 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 7 60 26.76 T 19-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 APA12_RS05175 cc787dd7057fb7604f6511da4faadc96 147 PANTHER PTHR12735 13 147 8.4E-45 T 19-04-2016 APA12_RS05175 cc787dd7057fb7604f6511da4faadc96 147 PANTHER PTHR12735:SF26 13 147 8.4E-45 T 19-04-2016 APA12_RS05175 cc787dd7057fb7604f6511da4faadc96 147 Gene3D G3DSA:3.90.1010.10 6 145 4.4E-50 T 19-04-2016 APA12_RS05175 cc787dd7057fb7604f6511da4faadc96 147 Pfam PF02657 Fe-S metabolism associated domain 22 139 1.2E-42 T 19-04-2016 IPR003808 Fe-S metabolism associated domain, SufE-like UniPathway: UPA00266 APA12_RS05175 cc787dd7057fb7604f6511da4faadc96 147 SUPERFAMILY SSF82649 9 143 5.18E-42 T 19-04-2016 APA12_RS10755 6d24ec1c17e338a727bb7cff068b66c9 332 Pfam PF05036 Sporulation related domain 251 331 3.7E-14 T 19-04-2016 IPR007730 Sporulation-related domain GO:0042834 APA12_RS10755 6d24ec1c17e338a727bb7cff068b66c9 332 SUPERFAMILY SSF110997 251 331 3.53E-8 T 19-04-2016 IPR007730 Sporulation-related domain GO:0042834 APA12_RS10755 6d24ec1c17e338a727bb7cff068b66c9 332 Gene3D G3DSA:3.30.70.1070 250 331 3.5E-5 T 19-04-2016 IPR007730 Sporulation-related domain GO:0042834 APA12_RS09890 da523ea5bf6d103872eb6137a1250d7e 459 PANTHER PTHR11236 21 456 8.7E-137 T 19-04-2016 APA12_RS09890 da523ea5bf6d103872eb6137a1250d7e 459 Pfam PF04715 Anthranilate synthase component I, N terminal region 11 149 8.0E-16 T 19-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APA12_RS09890 da523ea5bf6d103872eb6137a1250d7e 459 PRINTS PR00095 Anthranilate synthase component I signature 392 406 3.2E-10 T 19-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APA12_RS09890 da523ea5bf6d103872eb6137a1250d7e 459 PRINTS PR00095 Anthranilate synthase component I signature 407 421 3.2E-10 T 19-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APA12_RS09890 da523ea5bf6d103872eb6137a1250d7e 459 PRINTS PR00095 Anthranilate synthase component I signature 298 311 3.2E-10 T 19-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APA12_RS09890 da523ea5bf6d103872eb6137a1250d7e 459 PRINTS PR00095 Anthranilate synthase component I signature 312 325 3.2E-10 T 19-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APA12_RS09890 da523ea5bf6d103872eb6137a1250d7e 459 Gene3D G3DSA:3.60.120.10 11 454 9.8E-134 T 19-04-2016 IPR005801 ADC synthase GO:0009058 APA12_RS09890 da523ea5bf6d103872eb6137a1250d7e 459 Pfam PF00425 chorismate binding enzyme 192 450 2.0E-90 T 19-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal APA12_RS09890 da523ea5bf6d103872eb6137a1250d7e 459 SUPERFAMILY SSF56322 14 456 2.09E-126 T 19-04-2016 IPR005801 ADC synthase GO:0009058 APA12_RS07400 08614882607c9f5d64d4184ade1d5690 397 Pfam PF00999 Sodium/hydrogen exchanger family 12 391 3.6E-27 T 19-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 APA12_RS07400 08614882607c9f5d64d4184ade1d5690 397 PANTHER PTHR32468 4 397 5.6E-29 T 19-04-2016 APA12_RS03855 59c50862c4de246cf705c79aa56bc533 411 PANTHER PTHR12169 5 396 1.6E-142 T 19-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 APA12_RS03855 59c50862c4de246cf705c79aa56bc533 411 Pfam PF03969 AFG1-like ATPase 18 396 4.2E-108 T 19-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 APA12_RS03855 59c50862c4de246cf705c79aa56bc533 411 SUPERFAMILY SSF52540 92 213 6.23E-12 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS03855 59c50862c4de246cf705c79aa56bc533 411 Gene3D G3DSA:3.40.50.300 88 208 5.5E-18 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS10710 dea33eaa6abe3af3e7e60869f4cb4dbf 369 PRINTS PR00111 Alpha/beta hydrolase fold signature 160 173 2.3E-8 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APA12_RS10710 dea33eaa6abe3af3e7e60869f4cb4dbf 369 PRINTS PR00111 Alpha/beta hydrolase fold signature 272 286 2.3E-8 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APA12_RS10710 dea33eaa6abe3af3e7e60869f4cb4dbf 369 PRINTS PR00111 Alpha/beta hydrolase fold signature 112 127 2.3E-8 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APA12_RS10710 dea33eaa6abe3af3e7e60869f4cb4dbf 369 SUPERFAMILY SSF53474 35 328 1.34E-41 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS10710 dea33eaa6abe3af3e7e60869f4cb4dbf 369 Pfam PF12146 Serine aminopeptidase, S33 83 316 2.4E-43 T 19-04-2016 IPR022742 Serine aminopeptidase, S33 APA12_RS10710 dea33eaa6abe3af3e7e60869f4cb4dbf 369 Gene3D G3DSA:3.40.50.1820 69 329 2.5E-42 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS10710 dea33eaa6abe3af3e7e60869f4cb4dbf 369 PANTHER PTHR11614 43 330 9.3E-40 T 19-04-2016 APA12_RS02355 e73d550985693ae713d3fea578ae246e 365 Gene3D G3DSA:3.40.50.150 157 268 2.0E-17 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS02355 e73d550985693ae713d3fea578ae246e 365 SUPERFAMILY SSF53335 125 254 4.56E-16 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS02355 e73d550985693ae713d3fea578ae246e 365 Pfam PF08241 Methyltransferase domain 156 203 4.8E-13 T 19-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 APA12_RS05835 76beb632a9fbfa6d3f13c8507f16061e 182 SUPERFAMILY SSF55620 7 147 2.11E-18 T 19-04-2016 APA12_RS05835 76beb632a9fbfa6d3f13c8507f16061e 182 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 7 147 1.5E-18 T 19-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein APA12_RS05835 76beb632a9fbfa6d3f13c8507f16061e 182 Gene3D G3DSA:3.30.479.10 9 147 9.0E-16 T 19-04-2016 APA12_RS04780 ed15101b74e00abdd352b491b74cb01f 177 PANTHER PTHR11655:SF14 1 176 2.3E-81 T 19-04-2016 APA12_RS04780 ed15101b74e00abdd352b491b74cb01f 177 PIRSF PIRSF002162 1 177 2.3E-47 T 19-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 APA12_RS04780 ed15101b74e00abdd352b491b74cb01f 177 Pfam PF00347 Ribosomal protein L6 91 164 1.4E-20 T 19-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APA12_RS04780 ed15101b74e00abdd352b491b74cb01f 177 Pfam PF00347 Ribosomal protein L6 11 82 5.4E-13 T 19-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APA12_RS04780 ed15101b74e00abdd352b491b74cb01f 177 SUPERFAMILY SSF56053 83 177 1.31E-36 T 19-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APA12_RS04780 ed15101b74e00abdd352b491b74cb01f 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 35.853 T 19-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APA12_RS04780 ed15101b74e00abdd352b491b74cb01f 177 Gene3D G3DSA:3.90.930.12 2 82 1.5E-24 T 19-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APA12_RS04780 ed15101b74e00abdd352b491b74cb01f 177 PANTHER PTHR11655 1 176 2.3E-81 T 19-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 APA12_RS04780 ed15101b74e00abdd352b491b74cb01f 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 6.2E-71 T 19-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APA12_RS04780 ed15101b74e00abdd352b491b74cb01f 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 3.87E-30 T 19-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APA12_RS04780 ed15101b74e00abdd352b491b74cb01f 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 3.87E-30 T 19-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APA12_RS04780 ed15101b74e00abdd352b491b74cb01f 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 3.87E-30 T 19-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APA12_RS04780 ed15101b74e00abdd352b491b74cb01f 177 SUPERFAMILY SSF56053 2 82 1.67E-20 T 19-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APA12_RS04780 ed15101b74e00abdd352b491b74cb01f 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 19-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04780 ed15101b74e00abdd352b491b74cb01f 177 Gene3D G3DSA:3.90.930.12 83 177 3.4E-40 T 19-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APA12_RS06745 becb67dee7a516bec7299f12c379e787 109 PANTHER PTHR30561 1 108 3.5E-32 T 19-04-2016 APA12_RS06745 becb67dee7a516bec7299f12c379e787 109 PANTHER PTHR30561:SF1 1 108 3.5E-32 T 19-04-2016 APA12_RS06745 becb67dee7a516bec7299f12c379e787 109 Pfam PF00893 Small Multidrug Resistance protein 4 94 3.1E-20 T 19-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 APA12_RS06745 becb67dee7a516bec7299f12c379e787 109 SUPERFAMILY SSF103481 6 103 3.01E-19 T 19-04-2016 APA12_RS10620 30309740721edd22b0762237158e5940 355 SUPERFAMILY SSF51905 3 172 7.21E-62 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS10620 30309740721edd22b0762237158e5940 355 SUPERFAMILY SSF51905 260 350 7.21E-62 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS10620 30309740721edd22b0762237158e5940 355 Gene3D G3DSA:3.30.9.10 321 347 1.8E-11 T 19-04-2016 APA12_RS10620 30309740721edd22b0762237158e5940 355 Gene3D G3DSA:3.30.9.10 163 266 1.8E-11 T 19-04-2016 APA12_RS10620 30309740721edd22b0762237158e5940 355 PANTHER PTHR13789:SF90 1 355 3.5E-93 T 19-04-2016 APA12_RS10620 30309740721edd22b0762237158e5940 355 Gene3D G3DSA:3.50.50.60 271 310 8.2E-59 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS10620 30309740721edd22b0762237158e5940 355 Gene3D G3DSA:3.50.50.60 2 162 8.2E-59 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS10620 30309740721edd22b0762237158e5940 355 Pfam PF01494 FAD binding domain 4 336 1.7E-80 T 19-04-2016 IPR002938 FAD-binding domain GO:0071949 APA12_RS10620 30309740721edd22b0762237158e5940 355 PANTHER PTHR13789 1 355 3.5E-93 T 19-04-2016 APA12_RS10620 30309740721edd22b0762237158e5940 355 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 6.2E-44 T 19-04-2016 APA12_RS10620 30309740721edd22b0762237158e5940 355 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 6.2E-44 T 19-04-2016 APA12_RS10620 30309740721edd22b0762237158e5940 355 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 324 340 6.2E-44 T 19-04-2016 APA12_RS10620 30309740721edd22b0762237158e5940 355 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 306 324 6.2E-44 T 19-04-2016 APA12_RS10620 30309740721edd22b0762237158e5940 355 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 273 288 6.2E-44 T 19-04-2016 APA12_RS10620 30309740721edd22b0762237158e5940 355 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 288 304 6.2E-44 T 19-04-2016 APA12_RS08925 181bb0d92e39350529cbe9858a3e3e5c 461 PANTHER PTHR12526 179 460 8.1E-31 T 19-04-2016 APA12_RS08925 181bb0d92e39350529cbe9858a3e3e5c 461 Gene3D G3DSA:3.40.50.2000 254 440 1.4E-13 T 19-04-2016 APA12_RS08925 181bb0d92e39350529cbe9858a3e3e5c 461 SUPERFAMILY SSF53756 180 457 9.42E-40 T 19-04-2016 APA12_RS08925 181bb0d92e39350529cbe9858a3e3e5c 461 Pfam PF00534 Glycosyl transferases group 1 284 441 1.5E-16 T 19-04-2016 IPR001296 Glycosyl transferase, family 1 APA12_RS12105 90249d3765438bae7c41c6d106aa7544 327 SUPERFAMILY SSF52540 81 320 9.55E-44 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS12105 90249d3765438bae7c41c6d106aa7544 327 PANTHER PTHR23077 100 321 1.1E-30 T 19-04-2016 APA12_RS12105 90249d3765438bae7c41c6d106aa7544 327 SMART SM00382 122 254 3.4E-15 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS12105 90249d3765438bae7c41c6d106aa7544 327 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 126 250 3.9E-25 T 19-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APA12_RS12105 90249d3765438bae7c41c6d106aa7544 327 Gene3D G3DSA:3.40.50.300 83 267 6.7E-37 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS04665 67d5c61faf1dc6bc75728a4e204ccf1b 172 PANTHER PTHR11560 1 167 4.0E-49 T 19-04-2016 APA12_RS04665 67d5c61faf1dc6bc75728a4e204ccf1b 172 Pfam PF00466 Ribosomal protein L10 2 98 4.6E-23 T 19-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 APA12_RS04665 67d5c61faf1dc6bc75728a4e204ccf1b 172 SUPERFAMILY SSF160369 2 167 1.05E-52 T 19-04-2016 APA12_RS04665 67d5c61faf1dc6bc75728a4e204ccf1b 172 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 1 158 24.44 T 19-04-2016 IPR022973 Ribosomal protein L10 APA12_RS04665 67d5c61faf1dc6bc75728a4e204ccf1b 172 ProSitePatterns PS01109 Ribosomal protein L10 signature. 6 40 - T 19-04-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS05760 a5669befbb4fe38d61d73c7c17c9b86d 188 Pfam PF09335 SNARE associated Golgi protein 45 144 3.2E-11 T 19-04-2016 IPR032816 SNARE associated Golgi protein APA12_RS00210 5e6a5a79be4a49b87bd39890a8a1954a 292 Gene3D G3DSA:3.40.30.10 128 289 8.9E-41 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS00210 5e6a5a79be4a49b87bd39890a8a1954a 292 SUPERFAMILY SSF52833 126 286 2.21E-35 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS00210 5e6a5a79be4a49b87bd39890a8a1954a 292 PANTHER PTHR13887 64 291 1.3E-46 T 19-04-2016 APA12_RS00210 5e6a5a79be4a49b87bd39890a8a1954a 292 Pfam PF13462 Thioredoxin 128 287 2.2E-20 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS00210 5e6a5a79be4a49b87bd39890a8a1954a 292 PANTHER PTHR13887:SF25 64 291 1.3E-46 T 19-04-2016 APA12_RS01420 bc0e7defb4aa09cec0f28a26d53ac2f3 167 Pfam PF11948 Protein of unknown function (DUF3465) 39 167 9.4E-32 T 19-04-2016 IPR021856 Protein of unknown function DUF3465 APA12_RS09190 2db50cb23389a3def1c3e9519338b097 433 SUPERFAMILY SSF53098 127 370 1.82E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS09190 2db50cb23389a3def1c3e9519338b097 433 Pfam PF13701 Transposase DDE domain group 1 1 430 4.5E-159 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS12180 2db50cb23389a3def1c3e9519338b097 433 SUPERFAMILY SSF53098 127 370 1.82E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS12180 2db50cb23389a3def1c3e9519338b097 433 Pfam PF13701 Transposase DDE domain group 1 1 430 4.5E-159 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS08275 125599ccb4b19b62bba35eb4fdcefbce 237 PANTHER PTHR33269:SF4 1 195 1.6E-62 T 19-04-2016 APA12_RS08275 125599ccb4b19b62bba35eb4fdcefbce 237 PANTHER PTHR33269 1 195 1.6E-62 T 19-04-2016 APA12_RS08275 125599ccb4b19b62bba35eb4fdcefbce 237 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 17 164 4.9E-38 T 19-04-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 APA12_RS05505 f47348ef40958a8f2559e9108a736754 393 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 240 249 - T 19-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 APA12_RS05505 f47348ef40958a8f2559e9108a736754 393 Pfam PF00155 Aminotransferase class I and II 43 384 5.2E-52 T 19-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APA12_RS05505 f47348ef40958a8f2559e9108a736754 393 Gene3D G3DSA:3.90.1150.10 278 387 1.1E-27 T 19-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APA12_RS05505 f47348ef40958a8f2559e9108a736754 393 SUPERFAMILY SSF53383 5 389 1.18E-92 T 19-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APA12_RS05505 f47348ef40958a8f2559e9108a736754 393 PANTHER PTHR13693:SF53 43 390 4.2E-122 T 19-04-2016 APA12_RS05505 f47348ef40958a8f2559e9108a736754 393 Gene3D G3DSA:3.40.640.10 68 277 1.2E-69 T 19-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APA12_RS05505 f47348ef40958a8f2559e9108a736754 393 PANTHER PTHR13693 43 390 4.2E-122 T 19-04-2016 APA12_RS13405 49f204a44c887667116edad1a1e6c124 473 Gene3D G3DSA:2.150.10.10 112 242 1.7E-7 T 19-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APA12_RS13405 49f204a44c887667116edad1a1e6c124 473 Gene3D G3DSA:2.150.10.10 247 466 2.2E-9 T 19-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APA12_RS13405 49f204a44c887667116edad1a1e6c124 473 SUPERFAMILY SSF51120 275 463 5.36E-9 T 19-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APA12_RS13405 49f204a44c887667116edad1a1e6c124 473 SUPERFAMILY SSF51120 90 240 1.31E-7 T 19-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APA12_RS08895 2c4ba2d191eeaadaa64c489adee73433 383 PANTHER PTHR21197:SF0 1 383 1.1E-96 T 19-04-2016 APA12_RS08895 2c4ba2d191eeaadaa64c489adee73433 383 SUPERFAMILY SSF51971 332 368 5.41E-53 T 19-04-2016 APA12_RS08895 2c4ba2d191eeaadaa64c489adee73433 383 SUPERFAMILY SSF51971 3 262 5.41E-53 T 19-04-2016 APA12_RS08895 2c4ba2d191eeaadaa64c489adee73433 383 Pfam PF03275 UDP-galactopyranose mutase 147 347 1.4E-75 T 19-04-2016 IPR015899 UDP-galactopyranose mutase, C-terminal GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 APA12_RS08895 2c4ba2d191eeaadaa64c489adee73433 383 Gene3D G3DSA:3.40.50.720 322 362 4.8E-40 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS08895 2c4ba2d191eeaadaa64c489adee73433 383 Gene3D G3DSA:3.40.50.720 4 79 4.8E-40 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS08895 2c4ba2d191eeaadaa64c489adee73433 383 Gene3D G3DSA:3.40.50.720 182 253 4.8E-40 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS08895 2c4ba2d191eeaadaa64c489adee73433 383 Pfam PF13450 NAD(P)-binding Rossmann-like domain 5 73 2.7E-19 T 19-04-2016 APA12_RS08895 2c4ba2d191eeaadaa64c489adee73433 383 PANTHER PTHR21197 1 383 1.1E-96 T 19-04-2016 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 APA12_RS08895 2c4ba2d191eeaadaa64c489adee73433 383 SUPERFAMILY SSF54373 244 314 5.1E-24 T 19-04-2016 APA12_RS08895 2c4ba2d191eeaadaa64c489adee73433 383 TIGRFAM TIGR00031 UDP-GALP_mutase: UDP-galactopyranose mutase 3 360 4.4E-97 T 19-04-2016 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 APA12_RS15585 22b608b7507d9952a7bcb2e04d5d1d10 72 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 6 68 9.2E-22 T 19-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain APA12_RS15585 22b608b7507d9952a7bcb2e04d5d1d10 72 SMART SM01002 3 71 1.6E-4 T 19-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain APA12_RS15585 22b608b7507d9952a7bcb2e04d5d1d10 72 Gene3D G3DSA:3.40.50.720 6 66 1.9E-22 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS15585 22b608b7507d9952a7bcb2e04d5d1d10 72 PANTHER PTHR10160 6 68 6.1E-21 T 19-04-2016 APA12_RS15585 22b608b7507d9952a7bcb2e04d5d1d10 72 SUPERFAMILY SSF51735 7 67 5.34E-15 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS10915 60ba40613797535a591cde68bffa53cc 339 PANTHER PTHR30365 1 339 4.5E-131 T 19-04-2016 APA12_RS10915 60ba40613797535a591cde68bffa53cc 339 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 8 328 2.7E-92 T 19-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 APA12_RS10915 60ba40613797535a591cde68bffa53cc 339 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 8 222 4.9E-41 T 19-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 APA12_RS10915 60ba40613797535a591cde68bffa53cc 339 PANTHER PTHR30365:SF4 1 339 4.5E-131 T 19-04-2016 APA12_RS09635 8c58d39c34f12025a6f57ba5f9869244 387 PANTHER PTHR30474:SF2 1 384 7.6E-85 T 19-04-2016 APA12_RS09635 8c58d39c34f12025a6f57ba5f9869244 387 Pfam PF01098 Cell cycle protein 23 367 1.0E-65 T 19-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 APA12_RS09635 8c58d39c34f12025a6f57ba5f9869244 387 PANTHER PTHR30474 1 384 7.6E-85 T 19-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 APA12_RS02490 591a3ac56a456e75b3be60154c3518ca 176 Gene3D G3DSA:1.10.760.10 29 134 1.8E-15 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS02490 591a3ac56a456e75b3be60154c3518ca 176 SUPERFAMILY SSF46626 21 140 3.53E-19 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS02490 591a3ac56a456e75b3be60154c3518ca 176 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 57 130 9.8E-9 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS13110 4df2e425073071231dc209b6e2120b57 485 PIRSF PIRSF004919 24 485 1.2E-133 T 19-04-2016 IPR025502 TldD KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APA12_RS13110 4df2e425073071231dc209b6e2120b57 485 PANTHER PTHR30624:SF4 22 485 1.1E-205 T 19-04-2016 APA12_RS13110 4df2e425073071231dc209b6e2120b57 485 SUPERFAMILY SSF111283 27 484 6.02E-125 T 19-04-2016 APA12_RS13110 4df2e425073071231dc209b6e2120b57 485 PANTHER PTHR30624 22 485 1.1E-205 T 19-04-2016 APA12_RS13110 4df2e425073071231dc209b6e2120b57 485 Pfam PF01523 Putative modulator of DNA gyrase 46 336 3.5E-62 T 19-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APA12_RS05465 5aa66545bc900e81065867bd8a1f1458 270 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 31 40 - T 19-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 APA12_RS05465 5aa66545bc900e81065867bd8a1f1458 270 Gene3D G3DSA:3.60.10.10 5 267 3.2E-70 T 19-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APA12_RS05465 5aa66545bc900e81065867bd8a1f1458 270 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 8 259 1.3E-23 T 19-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APA12_RS05465 5aa66545bc900e81065867bd8a1f1458 270 PANTHER PTHR22748:SF7 4 270 5.9E-80 T 19-04-2016 APA12_RS05465 5aa66545bc900e81065867bd8a1f1458 270 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 5 266 2.1E-54 T 19-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 APA12_RS05465 5aa66545bc900e81065867bd8a1f1458 270 PANTHER PTHR22748 4 270 5.9E-80 T 19-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 APA12_RS05465 5aa66545bc900e81065867bd8a1f1458 270 SUPERFAMILY SSF56219 5 268 4.84E-70 T 19-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APA12_RS03945 9833e6cd9dcdcf76fad6848c05569707 229 TIGRFAM TIGR00164 PS_decarb_rel: phosphatidylserine decarboxylase homolog 50 228 7.5E-55 T 19-04-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 APA12_RS03945 9833e6cd9dcdcf76fad6848c05569707 229 Hamap MF_00664 Phosphatidylserine decarboxylase proenzyme [psd]. 13 229 34.185 T 19-04-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 APA12_RS03945 9833e6cd9dcdcf76fad6848c05569707 229 Pfam PF02666 Phosphatidylserine decarboxylase 56 226 1.2E-32 T 19-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 APA12_RS03945 9833e6cd9dcdcf76fad6848c05569707 229 PANTHER PTHR35809 10 229 3.2E-66 T 19-04-2016 APA12_RS13065 99c0223746a7d2e0a19815174d9a0be1 192 Gene3D G3DSA:3.40.50.1390 9 131 1.5E-36 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APA12_RS13065 99c0223746a7d2e0a19815174d9a0be1 192 SUPERFAMILY SSF53041 9 148 4.58E-41 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APA12_RS13065 99c0223746a7d2e0a19815174d9a0be1 192 Pfam PF02796 Helix-turn-helix domain of resolvase 150 191 4.3E-11 T 19-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 APA12_RS13065 99c0223746a7d2e0a19815174d9a0be1 192 SUPERFAMILY SSF46689 150 190 1.48E-5 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS13065 99c0223746a7d2e0a19815174d9a0be1 192 PANTHER PTHR30461:SF9 7 190 4.0E-55 T 19-04-2016 APA12_RS13065 99c0223746a7d2e0a19815174d9a0be1 192 PANTHER PTHR30461 7 190 4.0E-55 T 19-04-2016 APA12_RS13065 99c0223746a7d2e0a19815174d9a0be1 192 Gene3D G3DSA:1.10.10.60 148 191 3.2E-14 T 19-04-2016 IPR009057 Homeodomain-like GO:0003677 APA12_RS13065 99c0223746a7d2e0a19815174d9a0be1 192 Pfam PF00239 Resolvase, N terminal domain 9 148 7.5E-43 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APA12_RS13065 99c0223746a7d2e0a19815174d9a0be1 192 SMART SM00857 9 148 1.5E-53 T 19-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APA12_RS10645 22b77be5ded219f52a0b56316b8e7d3e 275 PANTHER PTHR32552:SF26 47 268 1.8E-67 T 19-04-2016 APA12_RS10645 22b77be5ded219f52a0b56316b8e7d3e 275 SUPERFAMILY SSF53098 113 269 2.4E-40 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS10645 22b77be5ded219f52a0b56316b8e7d3e 275 Pfam PF00665 Integrase core domain 118 230 1.9E-27 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APA12_RS10645 22b77be5ded219f52a0b56316b8e7d3e 275 PANTHER PTHR32552 47 268 1.8E-67 T 19-04-2016 APA12_RS10645 22b77be5ded219f52a0b56316b8e7d3e 275 Gene3D G3DSA:3.30.420.10 113 268 3.9E-50 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS11115 1e02629cfeb7ab270f71eb3a4a7ab642 224 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 215 1.9E-19 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS11115 1e02629cfeb7ab270f71eb3a4a7ab642 224 PANTHER PTHR30450:SF1 1 223 1.6E-100 T 19-04-2016 APA12_RS11115 1e02629cfeb7ab270f71eb3a4a7ab642 224 Gene3D G3DSA:1.10.3720.10 8 215 3.1E-37 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS11115 1e02629cfeb7ab270f71eb3a4a7ab642 224 PANTHER PTHR30450 1 223 1.6E-100 T 19-04-2016 APA12_RS11115 1e02629cfeb7ab270f71eb3a4a7ab642 224 SUPERFAMILY SSF161098 8 201 1.44E-43 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS01980 17b8529f76d952fd6c4d29939ca366ee 389 TIGRFAM TIGR03472 HpnI: hopanoid biosynthesis associated glycosyl transferase protein HpnI 7 374 4.2E-135 T 19-04-2016 IPR017835 Hopanoid biosynthesis associated glycosyltransferase, HpnI APA12_RS01980 17b8529f76d952fd6c4d29939ca366ee 389 Pfam PF13506 Glycosyl transferase family 21 101 274 2.4E-43 T 19-04-2016 IPR025993 Ceramide glucosyltransferase GO:0016757 KEGG: 00600+2.4.1.80|MetaCyc: PWY-5129|UniPathway: UPA00222 APA12_RS01980 17b8529f76d952fd6c4d29939ca366ee 389 SUPERFAMILY SSF53448 41 277 4.76E-32 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS01980 17b8529f76d952fd6c4d29939ca366ee 389 PANTHER PTHR12726:SF0 33 328 3.4E-47 T 19-04-2016 APA12_RS01980 17b8529f76d952fd6c4d29939ca366ee 389 PANTHER PTHR12726 33 328 3.4E-47 T 19-04-2016 APA12_RS01980 17b8529f76d952fd6c4d29939ca366ee 389 Gene3D G3DSA:3.90.550.10 47 265 3.0E-20 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS11670 814238609f154832dc54e3a773f37cce 342 SUPERFAMILY SSF53335 13 336 1.35E-87 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS11670 814238609f154832dc54e3a773f37cce 342 PANTHER PTHR12049 32 342 6.1E-86 T 19-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA APA12_RS11670 814238609f154832dc54e3a773f37cce 342 PANTHER PTHR12049:SF7 32 342 6.1E-86 T 19-04-2016 APA12_RS11670 814238609f154832dc54e3a773f37cce 342 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 46 268 5.2E-57 T 19-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA APA12_RS05770 84d1917a70ab38d6235eb35729cc77c0 288 SUPERFAMILY SSF110997 236 286 6.67E-5 T 19-04-2016 IPR007730 Sporulation-related domain GO:0042834 APA12_RS05770 84d1917a70ab38d6235eb35729cc77c0 288 Pfam PF05036 Sporulation related domain 234 277 9.4E-6 T 19-04-2016 IPR007730 Sporulation-related domain GO:0042834 APA12_RS05770 84d1917a70ab38d6235eb35729cc77c0 288 PANTHER PTHR34183 64 288 1.9E-24 T 19-04-2016 APA12_RS05770 84d1917a70ab38d6235eb35729cc77c0 288 PANTHER PTHR34183:SF1 64 288 1.9E-24 T 19-04-2016 APA12_RS05770 84d1917a70ab38d6235eb35729cc77c0 288 Pfam PF03330 Lytic transglycolase 64 130 1.1E-8 T 19-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain APA12_RS06445 5c62d7d3940099c0925b1a38acee03f2 176 Pfam PF09933 Predicted small integral membrane protein (DUF2165) 20 175 1.9E-62 T 19-04-2016 IPR018681 Protein of unknown function DUF2165, transmembrane APA12_RS00025 7d729281665cb8d74ba78cb1f3501503 175 Pfam PF07813 LTXXQ motif family protein 57 148 2.3E-7 T 19-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 APA12_RS14180 c86c202ec3ddbb58278f369aa55bed31 319 Gene3D G3DSA:3.40.50.1820 127 316 3.2E-43 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS14180 c86c202ec3ddbb58278f369aa55bed31 319 PANTHER PTHR11731 144 319 3.7E-61 T 19-04-2016 APA12_RS14180 c86c202ec3ddbb58278f369aa55bed31 319 PANTHER PTHR11731:SF75 144 319 3.7E-61 T 19-04-2016 APA12_RS14180 c86c202ec3ddbb58278f369aa55bed31 319 Pfam PF00326 Prolyl oligopeptidase family 216 315 1.7E-27 T 19-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 APA12_RS14180 c86c202ec3ddbb58278f369aa55bed31 319 SUPERFAMILY SSF53474 168 315 4.87E-37 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS07525 7218aea35e30de06ffb9926e7a20613b 263 Pfam PF01728 FtsJ-like methyltransferase 80 253 5.4E-56 T 19-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 APA12_RS07525 7218aea35e30de06ffb9926e7a20613b 263 Gene3D G3DSA:3.40.50.150 45 255 2.2E-69 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS07525 7218aea35e30de06ffb9926e7a20613b 263 SUPERFAMILY SSF53335 50 255 5.98E-41 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS07525 7218aea35e30de06ffb9926e7a20613b 263 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 60 253 29.46 T 19-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 APA12_RS07525 7218aea35e30de06ffb9926e7a20613b 263 PANTHER PTHR10920 50 255 1.8E-99 T 19-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 APA12_RS12835 4aed905f1f80a109959717588c52f2e0 530 PANTHER PTHR37944 96 530 7.2E-57 T 19-04-2016 APA12_RS12835 4aed905f1f80a109959717588c52f2e0 530 PANTHER PTHR37944:SF2 96 530 7.2E-57 T 19-04-2016 APA12_RS12835 4aed905f1f80a109959717588c52f2e0 530 Pfam PF04966 Carbohydrate-selective porin, OprB family 136 530 7.5E-90 T 19-04-2016 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 APA12_RS09320 153777c630539c4769a5a17957e372ab 201 PANTHER PTHR11109 13 195 2.8E-96 T 19-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APA12_RS09320 153777c630539c4769a5a17957e372ab 201 Gene3D G3DSA:3.30.1130.10 67 194 2.1E-55 T 19-04-2016 APA12_RS09320 153777c630539c4769a5a17957e372ab 201 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 16 194 2.6E-66 T 19-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APA12_RS09320 153777c630539c4769a5a17957e372ab 201 Pfam PF01227 GTP cyclohydrolase I 16 193 1.1E-73 T 19-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APA12_RS09320 153777c630539c4769a5a17957e372ab 201 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 121 131 - T 19-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APA12_RS09320 153777c630539c4769a5a17957e372ab 201 SUPERFAMILY SSF55620 5 194 5.63E-75 T 19-04-2016 APA12_RS09320 153777c630539c4769a5a17957e372ab 201 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 73 89 - T 19-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APA12_RS09320 153777c630539c4769a5a17957e372ab 201 Gene3D G3DSA:1.10.286.10 10 61 1.0E-22 T 19-04-2016 APA12_RS09320 153777c630539c4769a5a17957e372ab 201 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 11 194 38.788 T 19-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APA12_RS02650 b7ab17c908c9498ca942a245e6aea55a 168 Pfam PF13262 Protein of unknown function (DUF4054) 34 147 7.1E-25 T 19-04-2016 IPR025127 Protein of unknown function DUF4054 APA12_RS04925 85703b97dd6bee2a8f68638cfa3148da 201 Gene3D G3DSA:3.10.540.10 25 84 1.3E-17 T 19-04-2016 APA12_RS04925 85703b97dd6bee2a8f68638cfa3148da 201 Pfam PF06938 Protein of unknown function (DUF1285) 35 188 3.3E-47 T 19-04-2016 IPR010707 Protein of unknown function DUF1285 APA12_RS04925 85703b97dd6bee2a8f68638cfa3148da 201 Gene3D G3DSA:2.30.270.10 85 164 4.8E-26 T 19-04-2016 IPR023361 Protein of unknown function DUF1285, beta-roll domain APA12_RS02800 af83ce63f882fc23f93d45b4be294431 127 Gene3D G3DSA:3.10.180.10 1 121 5.0E-16 T 19-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APA12_RS02800 af83ce63f882fc23f93d45b4be294431 127 PANTHER PTHR35006 1 120 1.1E-53 T 19-04-2016 APA12_RS02800 af83ce63f882fc23f93d45b4be294431 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 121 1.4E-4 T 19-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APA12_RS02800 af83ce63f882fc23f93d45b4be294431 127 SUPERFAMILY SSF54593 2 126 1.22E-18 T 19-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APA12_RS02800 af83ce63f882fc23f93d45b4be294431 127 PANTHER PTHR35006:SF1 1 120 1.1E-53 T 19-04-2016 APA12_RS01240 46f83879d0194d5a3043c39a96cc1715 256 Gene3D G3DSA:3.90.550.10 27 236 1.6E-46 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS01240 46f83879d0194d5a3043c39a96cc1715 256 SUPERFAMILY SSF53448 24 233 3.64E-49 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS01240 46f83879d0194d5a3043c39a96cc1715 256 PANTHER PTHR22916 27 251 8.1E-47 T 19-04-2016 APA12_RS01240 46f83879d0194d5a3043c39a96cc1715 256 Pfam PF00535 Glycosyl transferase family 2 29 153 8.7E-28 T 19-04-2016 IPR001173 Glycosyltransferase 2-like APA12_RS05140 87d4e3089e995c4778fb387ef97245b7 226 SMART SM00382 30 217 1.5E-8 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS05140 87d4e3089e995c4778fb387ef97245b7 226 SUPERFAMILY SSF52540 2 221 3.38E-56 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05140 87d4e3089e995c4778fb387ef97245b7 226 PANTHER PTHR24220:SF470 3 222 7.5E-78 T 19-04-2016 APA12_RS05140 87d4e3089e995c4778fb387ef97245b7 226 Pfam PF00005 ABC transporter 20 169 3.4E-31 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS05140 87d4e3089e995c4778fb387ef97245b7 226 Gene3D G3DSA:3.40.50.300 1 221 2.2E-60 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS05140 87d4e3089e995c4778fb387ef97245b7 226 PANTHER PTHR24220 3 222 7.5E-78 T 19-04-2016 APA12_RS02245 75aac4973049c3049f4817e9d9f2cb89 633 Pfam PF13403 Hint domain 283 423 1.1E-37 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS02245 75aac4973049c3049f4817e9d9f2cb89 633 SUPERFAMILY SSF51294 283 420 4.19E-8 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS00485 d32bfc36b1a327d6415b21e0fa79516d 110 Pfam PF00037 4Fe-4S binding domain 34 55 1.6E-7 T 19-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APA12_RS00485 d32bfc36b1a327d6415b21e0fa79516d 110 Gene3D G3DSA:3.30.70.20 3 99 1.6E-20 T 19-04-2016 APA12_RS00485 d32bfc36b1a327d6415b21e0fa79516d 110 PRINTS PR00354 7Fe ferredoxin signature 35 52 2.8E-17 T 19-04-2016 IPR000813 7Fe ferredoxin GO:0009055 APA12_RS00485 d32bfc36b1a327d6415b21e0fa79516d 110 PRINTS PR00354 7Fe ferredoxin signature 19 29 2.8E-17 T 19-04-2016 IPR000813 7Fe ferredoxin GO:0009055 APA12_RS00485 d32bfc36b1a327d6415b21e0fa79516d 110 PRINTS PR00354 7Fe ferredoxin signature 9 19 2.8E-17 T 19-04-2016 IPR000813 7Fe ferredoxin GO:0009055 APA12_RS00485 d32bfc36b1a327d6415b21e0fa79516d 110 PANTHER PTHR11938:SF101 1 82 3.7E-33 T 19-04-2016 APA12_RS00485 d32bfc36b1a327d6415b21e0fa79516d 110 SUPERFAMILY SSF54862 3 99 7.09E-23 T 19-04-2016 APA12_RS00485 d32bfc36b1a327d6415b21e0fa79516d 110 Pfam PF11953 Domain of unknown function (DUF3470) 65 103 2.2E-18 T 19-04-2016 IPR022569 Ferredoxin, C-terminal APA12_RS00485 d32bfc36b1a327d6415b21e0fa79516d 110 PANTHER PTHR11938 1 82 3.7E-33 T 19-04-2016 APA12_RS00485 d32bfc36b1a327d6415b21e0fa79516d 110 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 19-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APA12_RS12110 9dc0bcd86be3292953551e38df3bb39d 76 Pfam PF10038 Protein of unknown function (DUF2274) 1 70 1.0E-31 T 19-04-2016 IPR018733 Protein of unknown function DUF2274 APA12_RS00800 51ff8fff5f63c9380f93c32d238d84d7 308 PANTHER PTHR11795 12 308 7.8E-100 T 19-04-2016 APA12_RS00800 51ff8fff5f63c9380f93c32d238d84d7 308 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 16 307 2.4E-119 T 19-04-2016 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type APA12_RS00800 51ff8fff5f63c9380f93c32d238d84d7 308 Pfam PF02653 Branched-chain amino acid transport system / permease component 19 294 1.6E-45 T 19-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APA12_RS00800 51ff8fff5f63c9380f93c32d238d84d7 308 PANTHER PTHR11795:SF349 12 308 7.8E-100 T 19-04-2016 APA12_RS01295 254734f695c3ab281431da133a339081 122 Pfam PF05164 Cell division protein ZapA 4 101 4.0E-18 T 19-04-2016 IPR007838 Cell division protein ZapA-like APA12_RS01295 254734f695c3ab281431da133a339081 122 SUPERFAMILY SSF102829 4 67 2.75E-14 T 19-04-2016 IPR007838 Cell division protein ZapA-like APA12_RS07095 7fb56f1b04632fb7fd7c5ff9199221b7 100 SUPERFAMILY SSF48613 8 94 6.04E-17 T 19-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 APA12_RS07095 7fb56f1b04632fb7fd7c5ff9199221b7 100 Pfam PF01126 Heme oxygenase 8 59 1.7E-4 T 19-04-2016 IPR016053 Haem oxygenase-like GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|Reactome: REACT_9431 APA12_RS07095 7fb56f1b04632fb7fd7c5ff9199221b7 100 Gene3D G3DSA:1.20.910.10 4 95 2.0E-27 T 19-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 APA12_RS10100 4aadabffc1ad8ecd6eef6a2fb8faadc8 437 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 5 427 41.28 T 19-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APA12_RS10100 4aadabffc1ad8ecd6eef6a2fb8faadc8 437 Pfam PF00815 Histidinol dehydrogenase 22 427 5.2E-166 T 19-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APA12_RS10100 4aadabffc1ad8ecd6eef6a2fb8faadc8 437 SUPERFAMILY SSF53720 27 429 1.04E-80 T 19-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APA12_RS10100 4aadabffc1ad8ecd6eef6a2fb8faadc8 437 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 426 2.3E-160 T 19-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APA12_RS10100 4aadabffc1ad8ecd6eef6a2fb8faadc8 437 PIRSF PIRSF000099 2 430 1.6E-160 T 19-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APA12_RS10100 4aadabffc1ad8ecd6eef6a2fb8faadc8 437 PANTHER PTHR21256 1 433 4.5E-196 T 19-04-2016 APA12_RS10100 4aadabffc1ad8ecd6eef6a2fb8faadc8 437 PRINTS PR00083 Histidinol dehydrogenase signature 361 379 3.0E-80 T 19-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APA12_RS10100 4aadabffc1ad8ecd6eef6a2fb8faadc8 437 PRINTS PR00083 Histidinol dehydrogenase signature 170 196 3.0E-80 T 19-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APA12_RS10100 4aadabffc1ad8ecd6eef6a2fb8faadc8 437 PRINTS PR00083 Histidinol dehydrogenase signature 136 162 3.0E-80 T 19-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APA12_RS10100 4aadabffc1ad8ecd6eef6a2fb8faadc8 437 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 3.0E-80 T 19-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APA12_RS10100 4aadabffc1ad8ecd6eef6a2fb8faadc8 437 PRINTS PR00083 Histidinol dehydrogenase signature 229 250 3.0E-80 T 19-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APA12_RS10100 4aadabffc1ad8ecd6eef6a2fb8faadc8 437 PRINTS PR00083 Histidinol dehydrogenase signature 320 345 3.0E-80 T 19-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APA12_RS10100 4aadabffc1ad8ecd6eef6a2fb8faadc8 437 PRINTS PR00083 Histidinol dehydrogenase signature 251 270 3.0E-80 T 19-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APA12_RS10100 4aadabffc1ad8ecd6eef6a2fb8faadc8 437 PRINTS PR00083 Histidinol dehydrogenase signature 200 225 3.0E-80 T 19-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APA12_RS10100 4aadabffc1ad8ecd6eef6a2fb8faadc8 437 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 229 261 - T 19-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APA12_RS10100 4aadabffc1ad8ecd6eef6a2fb8faadc8 437 Gene3D G3DSA:3.40.50.1980 27 239 1.7E-80 T 19-04-2016 APA12_RS06920 87873fe4e838295fb0e9bf4c89e0da02 551 PANTHER PTHR32552 2 551 8.5E-45 T 19-04-2016 APA12_RS06920 87873fe4e838295fb0e9bf4c89e0da02 551 Pfam PF00593 TonB dependent receptor 273 524 1.4E-26 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS06920 87873fe4e838295fb0e9bf4c89e0da02 551 SUPERFAMILY SSF56935 269 550 2.78E-61 T 19-04-2016 APA12_RS06920 87873fe4e838295fb0e9bf4c89e0da02 551 SUPERFAMILY SSF56935 67 237 2.78E-61 T 19-04-2016 APA12_RS06920 87873fe4e838295fb0e9bf4c89e0da02 551 Gene3D G3DSA:2.40.170.20 5 550 4.7E-69 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS06920 87873fe4e838295fb0e9bf4c89e0da02 551 PANTHER PTHR32552:SF33 2 551 8.5E-45 T 19-04-2016 APA12_RS07325 2205550aecd6b9e5b2aa697cc0c4f2ff 252 Gene3D G3DSA:3.40.1010.10 2 110 2.8E-31 T 19-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 APA12_RS07325 2205550aecd6b9e5b2aa697cc0c4f2ff 252 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 208 6.1E-43 T 19-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 APA12_RS07325 2205550aecd6b9e5b2aa697cc0c4f2ff 252 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 3 249 3.6E-94 T 19-04-2016 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 APA12_RS07325 2205550aecd6b9e5b2aa697cc0c4f2ff 252 Gene3D G3DSA:3.30.950.10 111 230 6.1E-41 T 19-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 APA12_RS07325 2205550aecd6b9e5b2aa697cc0c4f2ff 252 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 6 20 - T 19-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APA12_RS07325 2205550aecd6b9e5b2aa697cc0c4f2ff 252 PANTHER PTHR21091 1 208 3.9E-58 T 19-04-2016 APA12_RS07325 2205550aecd6b9e5b2aa697cc0c4f2ff 252 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 76 109 - T 19-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APA12_RS07325 2205550aecd6b9e5b2aa697cc0c4f2ff 252 SUPERFAMILY SSF53790 2 248 1.16E-63 T 19-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 APA12_RS07325 2205550aecd6b9e5b2aa697cc0c4f2ff 252 PANTHER PTHR21091:SF17 1 208 3.9E-58 T 19-04-2016 APA12_RS06330 600b47016b1ce13145ed9cc46a28a660 172 Pfam PF04314 Protein of unknown function (DUF461) 58 154 4.8E-15 T 19-04-2016 IPR007410 DR1885-like metal-binding protein APA12_RS06330 600b47016b1ce13145ed9cc46a28a660 172 SUPERFAMILY SSF110087 45 162 4.97E-24 T 19-04-2016 IPR007410 DR1885-like metal-binding protein APA12_RS06185 8e87579ef0c36bc2503fa609e90d3439 246 PANTHER PTHR21139 1 243 2.9E-93 T 19-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APA12_RS06185 8e87579ef0c36bc2503fa609e90d3439 246 Pfam PF00121 Triosephosphate isomerase 5 240 4.5E-78 T 19-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APA12_RS06185 8e87579ef0c36bc2503fa609e90d3439 246 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 243 37.126 T 19-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APA12_RS06185 8e87579ef0c36bc2503fa609e90d3439 246 Gene3D G3DSA:3.20.20.70 1 243 7.6E-89 T 19-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APA12_RS06185 8e87579ef0c36bc2503fa609e90d3439 246 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 234 2.8E-52 T 19-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APA12_RS06185 8e87579ef0c36bc2503fa609e90d3439 246 SUPERFAMILY SSF51351 1 242 4.58E-83 T 19-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APA12_RS06185 8e87579ef0c36bc2503fa609e90d3439 246 ProSitePatterns PS00171 Triosephosphate isomerase active site. 159 169 - T 19-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APA12_RS04645 e50fa76219b86e91a328b5faa257acf9 450 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 66 394 4.6E-57 T 19-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APA12_RS04645 e50fa76219b86e91a328b5faa257acf9 450 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 90 313 9.9E-22 T 19-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APA12_RS04645 e50fa76219b86e91a328b5faa257acf9 450 PANTHER PTHR30469:SF4 15 405 8.8E-106 T 19-04-2016 APA12_RS04645 e50fa76219b86e91a328b5faa257acf9 450 PANTHER PTHR30469 15 405 8.8E-106 T 19-04-2016 APA12_RS04645 e50fa76219b86e91a328b5faa257acf9 450 SUPERFAMILY SSF111369 77 317 9.94E-29 T 19-04-2016 APA12_RS04645 e50fa76219b86e91a328b5faa257acf9 450 Gene3D G3DSA:2.40.50.100 89 122 2.4E-15 T 19-04-2016 APA12_RS04645 e50fa76219b86e91a328b5faa257acf9 450 Gene3D G3DSA:2.40.50.100 197 223 2.4E-15 T 19-04-2016 APA12_RS09660 6c0551b5bf3ffab6f06b93aae0026644 320 Pfam PF03799 Cell division protein FtsQ 139 257 2.3E-17 T 19-04-2016 IPR005548 Cell division protein FtsQ/DivIB APA12_RS09660 6c0551b5bf3ffab6f06b93aae0026644 320 Pfam PF08478 POTRA domain, FtsQ-type 68 135 4.7E-14 T 19-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type APA12_RS09660 6c0551b5bf3ffab6f06b93aae0026644 320 PANTHER PTHR35851:SF1 1 282 2.2E-26 T 19-04-2016 APA12_RS09660 6c0551b5bf3ffab6f06b93aae0026644 320 PANTHER PTHR35851 1 282 2.2E-26 T 19-04-2016 APA12_RS09660 6c0551b5bf3ffab6f06b93aae0026644 320 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 24 275 17.849 T 19-04-2016 IPR026579 Cell division protein FtsQ GO:0000917 APA12_RS10170 da75fff70a8c1615ec06d653de564de4 1960 Pfam PF06791 Prophage tail length tape measure protein 398 591 1.7E-14 T 19-04-2016 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal APA12_RS01410 fb37a7d447338ee43d2555ed3c1c5151 110 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 28 106 3.4E-36 T 19-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 APA12_RS01410 fb37a7d447338ee43d2555ed3c1c5151 110 SUPERFAMILY SSF54736 25 109 3.14E-33 T 19-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like APA12_RS01410 fb37a7d447338ee43d2555ed3c1c5151 110 PANTHER PTHR33473 21 110 4.8E-37 T 19-04-2016 APA12_RS01410 fb37a7d447338ee43d2555ed3c1c5151 110 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 9 105 29.423 T 19-04-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS APA12_RS01410 fb37a7d447338ee43d2555ed3c1c5151 110 Gene3D G3DSA:3.30.1390.10 14 110 2.6E-45 T 19-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like APA12_RS13080 7a9b5df3cab3399a99f5f8a53ebb075e 645 SUPERFAMILY SSF52540 23 138 7.88E-8 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS13080 7a9b5df3cab3399a99f5f8a53ebb075e 645 Gene3D G3DSA:3.40.50.300 20 138 9.7E-6 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS11180 3ab4247d9019e21b445f2a0dd4b16ed9 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 2.9E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS11180 3ab4247d9019e21b445f2a0dd4b16ed9 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 2.9E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS11180 3ab4247d9019e21b445f2a0dd4b16ed9 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 2.9E-8 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS11180 3ab4247d9019e21b445f2a0dd4b16ed9 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 19-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APA12_RS11180 3ab4247d9019e21b445f2a0dd4b16ed9 244 PANTHER PTHR24322 6 133 1.6E-48 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS11180 3ab4247d9019e21b445f2a0dd4b16ed9 244 PANTHER PTHR24322 150 182 1.6E-48 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS11180 3ab4247d9019e21b445f2a0dd4b16ed9 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 8 241 2.2E-50 T 19-04-2016 APA12_RS11180 3ab4247d9019e21b445f2a0dd4b16ed9 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2 181 0.0075 T 19-04-2016 APA12_RS11180 3ab4247d9019e21b445f2a0dd4b16ed9 244 Gene3D G3DSA:3.40.50.720 2 243 4.1E-67 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS11180 3ab4247d9019e21b445f2a0dd4b16ed9 244 SUPERFAMILY SSF51735 2 243 1.86E-64 T 19-04-2016 IPR016040 NAD(P)-binding domain APA12_RS11180 3ab4247d9019e21b445f2a0dd4b16ed9 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.5E-31 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS11180 3ab4247d9019e21b445f2a0dd4b16ed9 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 2.5E-31 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS11180 3ab4247d9019e21b445f2a0dd4b16ed9 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 2.5E-31 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS11180 3ab4247d9019e21b445f2a0dd4b16ed9 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 2.5E-31 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS11180 3ab4247d9019e21b445f2a0dd4b16ed9 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 2.5E-31 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS11180 3ab4247d9019e21b445f2a0dd4b16ed9 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 2.5E-31 T 19-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APA12_RS11180 3ab4247d9019e21b445f2a0dd4b16ed9 244 PANTHER PTHR24322:SF513 6 133 1.6E-48 T 19-04-2016 APA12_RS11180 3ab4247d9019e21b445f2a0dd4b16ed9 244 PANTHER PTHR24322:SF513 150 182 1.6E-48 T 19-04-2016 APA12_RS08720 1314beaea67b2fb85656d67522364370 328 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 11 311 3.3E-64 T 19-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 APA12_RS08720 1314beaea67b2fb85656d67522364370 328 Gene3D G3DSA:3.10.290.10 15 63 8.2E-6 T 19-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APA12_RS08720 1314beaea67b2fb85656d67522364370 328 PANTHER PTHR11079:SF74 80 322 1.7E-74 T 19-04-2016 APA12_RS08720 1314beaea67b2fb85656d67522364370 328 PANTHER PTHR11079:SF74 8 60 1.7E-74 T 19-04-2016 APA12_RS08720 1314beaea67b2fb85656d67522364370 328 PANTHER PTHR11079 80 322 1.7E-74 T 19-04-2016 APA12_RS08720 1314beaea67b2fb85656d67522364370 328 PANTHER PTHR11079 8 60 1.7E-74 T 19-04-2016 APA12_RS08720 1314beaea67b2fb85656d67522364370 328 SUPERFAMILY SSF55120 84 312 5.12E-60 T 19-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APA12_RS08720 1314beaea67b2fb85656d67522364370 328 Pfam PF00849 RNA pseudouridylate synthase 98 251 9.1E-34 T 19-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APA12_RS08720 1314beaea67b2fb85656d67522364370 328 SMART SM00363 15 85 9.4E-4 T 19-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APA12_RS08720 1314beaea67b2fb85656d67522364370 328 SUPERFAMILY SSF55174 14 63 4.58E-8 T 19-04-2016 APA12_RS08720 1314beaea67b2fb85656d67522364370 328 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 138 152 - T 19-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 APA12_RS08690 765f08deab0107b5d367962e662f7937 180 SUPERFAMILY SSF50447 5 91 2.97E-11 T 19-04-2016 IPR009000 Translation protein, beta-barrel domain APA12_RS08690 765f08deab0107b5d367962e662f7937 180 Pfam PF01782 RimM N-terminal domain 8 87 5.6E-11 T 19-04-2016 IPR002676 RimM protein GO:0006364 APA12_RS08690 765f08deab0107b5d367962e662f7937 180 Gene3D G3DSA:2.40.30.60 3 91 1.0E-13 T 19-04-2016 IPR002676 RimM protein GO:0006364 APA12_RS08690 765f08deab0107b5d367962e662f7937 180 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 5 162 19.025 T 19-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 APA12_RS08690 765f08deab0107b5d367962e662f7937 180 Gene3D G3DSA:2.30.30.240 97 161 1.2E-10 T 19-04-2016 APA12_RS08690 765f08deab0107b5d367962e662f7937 180 PANTHER PTHR33692 4 161 4.3E-24 T 19-04-2016 APA12_RS08690 765f08deab0107b5d367962e662f7937 180 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 6 161 5.4E-29 T 19-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 APA12_RS08690 765f08deab0107b5d367962e662f7937 180 SUPERFAMILY SSF50346 97 161 1.77E-10 T 19-04-2016 IPR011033 PRC-barrel-like APA12_RS04890 944eb9cc4b02de6c416f771b966a06ac 210 PANTHER PTHR10954 14 201 6.7E-61 T 19-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 APA12_RS04890 944eb9cc4b02de6c416f771b966a06ac 210 Hamap MF_00052_B Ribonuclease HII [rnhB]. 13 196 35.315 T 19-04-2016 IPR022898 Ribonuclease HII GO:0004523 APA12_RS04890 944eb9cc4b02de6c416f771b966a06ac 210 Pfam PF01351 Ribonuclease HII 15 195 5.7E-39 T 19-04-2016 IPR024567 Ribonuclease HII/HIII domain APA12_RS04890 944eb9cc4b02de6c416f771b966a06ac 210 Gene3D G3DSA:3.30.420.10 13 157 1.8E-42 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS04890 944eb9cc4b02de6c416f771b966a06ac 210 SUPERFAMILY SSF53098 13 204 2.88E-62 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS11275 5dd06e7b44bea1e8c7a398d2f9367de8 255 Pfam PF13520 Amino acid permease 31 205 5.5E-16 T 19-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APA12_RS11275 5dd06e7b44bea1e8c7a398d2f9367de8 255 PANTHER PTHR11785 1 228 3.4E-27 T 19-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APA12_RS00805 7702c54b0c73c739b9aa714d0e69fda8 371 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 26 343 5.0E-131 T 19-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC APA12_RS00805 7702c54b0c73c739b9aa714d0e69fda8 371 Pfam PF02653 Branched-chain amino acid transport system / permease component 33 333 1.3E-37 T 19-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APA12_RS00805 7702c54b0c73c739b9aa714d0e69fda8 371 PANTHER PTHR30482 4 77 6.3E-91 T 19-04-2016 APA12_RS00805 7702c54b0c73c739b9aa714d0e69fda8 371 PANTHER PTHR30482 108 350 6.3E-91 T 19-04-2016 APA12_RS00805 7702c54b0c73c739b9aa714d0e69fda8 371 PANTHER PTHR30482:SF1 4 77 6.3E-91 T 19-04-2016 APA12_RS00805 7702c54b0c73c739b9aa714d0e69fda8 371 PANTHER PTHR30482:SF1 108 350 6.3E-91 T 19-04-2016 APA12_RS03220 58252f59c77500f5e9cde6387b66940b 391 Pfam PF00561 alpha/beta hydrolase fold 48 369 4.0E-29 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APA12_RS03220 58252f59c77500f5e9cde6387b66940b 391 PANTHER PTHR32268:SF11 9 381 5.7E-168 T 19-04-2016 APA12_RS03220 58252f59c77500f5e9cde6387b66940b 391 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 19 381 5.4E-137 T 19-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 APA12_RS03220 58252f59c77500f5e9cde6387b66940b 391 PANTHER PTHR32268 9 381 5.7E-168 T 19-04-2016 APA12_RS03220 58252f59c77500f5e9cde6387b66940b 391 Hamap MF_00296 Homoserine O-acetyltransferase [metX]. 4 383 46.287 T 19-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 APA12_RS03220 58252f59c77500f5e9cde6387b66940b 391 SUPERFAMILY SSF53474 12 381 4.13E-98 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS03220 58252f59c77500f5e9cde6387b66940b 391 Gene3D G3DSA:3.40.50.1820 274 381 1.7E-34 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS03220 58252f59c77500f5e9cde6387b66940b 391 Gene3D G3DSA:3.40.50.1820 28 241 1.7E-34 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS03220 58252f59c77500f5e9cde6387b66940b 391 PIRSF PIRSF000443 2 389 6.8E-134 T 19-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 APA12_RS11435 9c8bc27cb0a37850292ee815d7abd3f1 142 Pfam PF07845 Protein of unknown function (DUF1636) 18 133 6.5E-31 T 19-04-2016 IPR012863 Protein of unknown function DUF1636 APA12_RS11435 9c8bc27cb0a37850292ee815d7abd3f1 142 SUPERFAMILY SSF52833 15 113 1.45E-5 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS01940 ae2243c3cc988167e295d224a54ffa67 196 SUPERFAMILY SSF100950 32 192 4.6E-22 T 19-04-2016 APA12_RS01940 ae2243c3cc988167e295d224a54ffa67 196 Gene3D G3DSA:3.40.50.10420 37 192 5.3E-22 T 19-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain APA12_RS01940 ae2243c3cc988167e295d224a54ffa67 196 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 84 188 6.6E-7 T 19-04-2016 IPR003741 LUD domain APA12_RS02585 1aaa02ca6cbefce72c58e703903f2e05 447 Gene3D G3DSA:3.80.30.20 171 403 1.7E-37 T 19-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APA12_RS02585 1aaa02ca6cbefce72c58e703903f2e05 447 SMART SM00729 169 377 4.8E-21 T 19-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APA12_RS02585 1aaa02ca6cbefce72c58e703903f2e05 447 SUPERFAMILY SSF102114 143 381 1.57E-34 T 19-04-2016 APA12_RS02585 1aaa02ca6cbefce72c58e703903f2e05 447 PANTHER PTHR11918 29 361 1.5E-74 T 19-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein APA12_RS02585 1aaa02ca6cbefce72c58e703903f2e05 447 PANTHER PTHR11918:SF64 29 361 1.5E-74 T 19-04-2016 APA12_RS02585 1aaa02ca6cbefce72c58e703903f2e05 447 Pfam PF02310 B12 binding domain 31 124 2.3E-8 T 19-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 APA12_RS02585 1aaa02ca6cbefce72c58e703903f2e05 447 Pfam PF04055 Radical SAM superfamily 174 334 8.0E-16 T 19-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APA12_RS11300 46b15f2ba38c999a9862907304e207d4 234 Pfam PF08238 Sel1 repeat 96 128 1.1E-7 T 19-04-2016 IPR006597 Sel1-like repeat APA12_RS11300 46b15f2ba38c999a9862907304e207d4 234 Pfam PF08238 Sel1 repeat 134 165 4.3 T 19-04-2016 IPR006597 Sel1-like repeat APA12_RS11300 46b15f2ba38c999a9862907304e207d4 234 Pfam PF08238 Sel1 repeat 58 92 0.7 T 19-04-2016 IPR006597 Sel1-like repeat APA12_RS11300 46b15f2ba38c999a9862907304e207d4 234 SMART SM00671 58 93 0.0042 T 19-04-2016 IPR006597 Sel1-like repeat APA12_RS11300 46b15f2ba38c999a9862907304e207d4 234 SMART SM00671 94 129 8.0E-6 T 19-04-2016 IPR006597 Sel1-like repeat APA12_RS11300 46b15f2ba38c999a9862907304e207d4 234 SMART SM00671 130 165 22.0 T 19-04-2016 IPR006597 Sel1-like repeat APA12_RS11300 46b15f2ba38c999a9862907304e207d4 234 SMART SM00671 26 57 100.0 T 19-04-2016 IPR006597 Sel1-like repeat APA12_RS11300 46b15f2ba38c999a9862907304e207d4 234 PANTHER PTHR11102 27 197 2.5E-26 T 19-04-2016 APA12_RS11300 46b15f2ba38c999a9862907304e207d4 234 SUPERFAMILY SSF81901 30 200 1.48E-31 T 19-04-2016 APA12_RS11300 46b15f2ba38c999a9862907304e207d4 234 Gene3D G3DSA:1.25.40.10 27 205 2.4E-36 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS04515 db24e2892ac72267e12785cb1727a650 243 SUPERFAMILY SSF48452 150 223 7.17E-5 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS04515 db24e2892ac72267e12785cb1727a650 243 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 1 111 4.7E-21 T 19-04-2016 IPR017560 Cytochrome c-type biogenesis protein CcmI APA12_RS04515 db24e2892ac72267e12785cb1727a650 243 Gene3D G3DSA:1.25.40.10 150 222 3.4E-5 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS13465 7f9593d7b40f2a9bd106f75be96c4367 138 ProDom PD076485 YNEG CYTOPLASMIC ECS2130 STY1535 18 125 1.0E-33 T 19-04-2016 IPR020378 Protein of unknown function DUF4186 APA12_RS13465 7f9593d7b40f2a9bd106f75be96c4367 138 Pfam PF13811 Domain of unknown function (DUF4186) 19 126 3.7E-47 T 19-04-2016 IPR020378 Protein of unknown function DUF4186 APA12_RS08745 0d9c83c4be35a302f0337e0c03d3033e 469 TIGRFAM TIGR01436 glu_cys_lig_pln: glutamate--cysteine ligase 14 468 9.7E-163 T 19-04-2016 IPR011556 Glutamate--cysteine ligase, plant GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 APA12_RS08745 0d9c83c4be35a302f0337e0c03d3033e 469 SUPERFAMILY SSF55931 319 452 3.04E-62 T 19-04-2016 APA12_RS08745 0d9c83c4be35a302f0337e0c03d3033e 469 SUPERFAMILY SSF55931 81 279 3.04E-62 T 19-04-2016 APA12_RS08745 0d9c83c4be35a302f0337e0c03d3033e 469 SUPERFAMILY SSF55931 25 47 3.04E-62 T 19-04-2016 APA12_RS08745 0d9c83c4be35a302f0337e0c03d3033e 469 PIRSF PIRSF017901 1 469 1.8E-167 T 19-04-2016 APA12_RS08745 0d9c83c4be35a302f0337e0c03d3033e 469 PANTHER PTHR34378 18 469 3.8E-175 T 19-04-2016 APA12_RS08745 0d9c83c4be35a302f0337e0c03d3033e 469 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 74 372 1.0E-83 T 19-04-2016 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 APA12_RS08745 0d9c83c4be35a302f0337e0c03d3033e 469 PANTHER PTHR34378:SF1 18 469 3.8E-175 T 19-04-2016 APA12_RS04325 b6ff63dac7e225c6f2de0e3318e9cd4d 853 Pfam PF13155 Toprim-like 160 222 1.3E-4 T 19-04-2016 APA12_RS04325 b6ff63dac7e225c6f2de0e3318e9cd4d 853 Pfam PF06048 Domain of unknown function (DUF927) 268 555 1.9E-82 T 19-04-2016 IPR009270 Domain of unknown function DUF927 APA12_RS04325 b6ff63dac7e225c6f2de0e3318e9cd4d 853 Gene3D G3DSA:3.40.1360.10 127 225 1.4E-7 T 19-04-2016 APA12_RS04885 423180b282a4d0058ec28706861fcd5d 101 Gene3D G3DSA:1.10.1470.10 11 68 2.4E-12 T 19-04-2016 IPR008462 CsbD-like APA12_RS04885 423180b282a4d0058ec28706861fcd5d 101 SUPERFAMILY SSF69047 11 67 1.09E-10 T 19-04-2016 IPR008462 CsbD-like APA12_RS04885 423180b282a4d0058ec28706861fcd5d 101 Pfam PF05532 CsbD-like 12 62 2.9E-15 T 19-04-2016 IPR008462 CsbD-like APA12_RS05165 48a05afc1fe12cad96f9cb629868ad9c 199 SUPERFAMILY SSF56235 16 190 1.51E-57 T 19-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APA12_RS05165 48a05afc1fe12cad96f9cb629868ad9c 199 PIRSF PIRSF039093 13 193 1.3E-82 T 19-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 APA12_RS05165 48a05afc1fe12cad96f9cb629868ad9c 199 Pfam PF00227 Proteasome subunit 17 189 6.4E-23 T 19-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 APA12_RS05165 48a05afc1fe12cad96f9cb629868ad9c 199 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 18 190 40.314 T 19-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 APA12_RS05165 48a05afc1fe12cad96f9cb629868ad9c 199 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 19 190 9.0E-82 T 19-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 APA12_RS05165 48a05afc1fe12cad96f9cb629868ad9c 199 Gene3D G3DSA:3.60.20.10 19 191 2.7E-84 T 19-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APA12_RS05165 48a05afc1fe12cad96f9cb629868ad9c 199 PANTHER PTHR32194 1 199 8.2E-125 T 19-04-2016 APA12_RS02755 5f26a8a8df771793ca66227aa4621161 416 SUPERFAMILY SSF56112 85 186 3.64E-38 T 19-04-2016 IPR011009 Protein kinase-like domain APA12_RS02755 5f26a8a8df771793ca66227aa4621161 416 SUPERFAMILY SSF56112 234 370 3.64E-38 T 19-04-2016 IPR011009 Protein kinase-like domain APA12_RS02755 5f26a8a8df771793ca66227aa4621161 416 Pfam PF01636 Phosphotransferase enzyme family 84 307 2.5E-20 T 19-04-2016 IPR002575 Aminoglycoside phosphotransferase APA12_RS02755 5f26a8a8df771793ca66227aa4621161 416 Gene3D G3DSA:3.90.1200.10 162 370 2.3E-26 T 19-04-2016 APA12_RS04785 61f9b94fc791ee2fa2e398c70ca9efa2 120 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 5 120 1.9E-40 T 19-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04785 61f9b94fc791ee2fa2e398c70ca9efa2 120 Gene3D G3DSA:3.30.420.100 25 120 6.4E-40 T 19-04-2016 APA12_RS04785 61f9b94fc791ee2fa2e398c70ca9efa2 120 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 3 120 28.424 T 19-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS04785 61f9b94fc791ee2fa2e398c70ca9efa2 120 SUPERFAMILY SSF53137 6 118 7.2E-49 T 19-04-2016 APA12_RS04785 61f9b94fc791ee2fa2e398c70ca9efa2 120 PANTHER PTHR12899 6 120 4.9E-40 T 19-04-2016 APA12_RS04785 61f9b94fc791ee2fa2e398c70ca9efa2 120 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 3 120 1.3E-42 T 19-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS05665 ba349ceee5e941526557c3d83d75bc38 88 SUPERFAMILY SSF52833 2 84 3.17E-23 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS05665 ba349ceee5e941526557c3d83d75bc38 88 PANTHER PTHR10168 4 83 5.1E-20 T 19-04-2016 APA12_RS05665 ba349ceee5e941526557c3d83d75bc38 88 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 82 6.6E-29 T 19-04-2016 IPR011900 Glutaredoxin, GrxC GO:0045454 APA12_RS05665 ba349ceee5e941526557c3d83d75bc38 88 PRINTS PR00160 Glutaredoxin signature 4 22 1.0E-13 T 19-04-2016 IPR014025 Glutaredoxin subgroup APA12_RS05665 ba349ceee5e941526557c3d83d75bc38 88 PRINTS PR00160 Glutaredoxin signature 47 60 1.0E-13 T 19-04-2016 IPR014025 Glutaredoxin subgroup APA12_RS05665 ba349ceee5e941526557c3d83d75bc38 88 PRINTS PR00160 Glutaredoxin signature 61 74 1.0E-13 T 19-04-2016 IPR014025 Glutaredoxin subgroup APA12_RS05665 ba349ceee5e941526557c3d83d75bc38 88 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 19-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 APA12_RS05665 ba349ceee5e941526557c3d83d75bc38 88 Pfam PF00462 Glutaredoxin 4 63 1.6E-16 T 19-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 APA12_RS05665 ba349ceee5e941526557c3d83d75bc38 88 Gene3D G3DSA:3.40.30.10 3 80 2.5E-24 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS12450 1cc0eb4fab5dcd756ed5b42014a3a389 174 PANTHER PTHR36926:SF1 1 158 4.6E-25 T 19-04-2016 APA12_RS12450 1cc0eb4fab5dcd756ed5b42014a3a389 174 Pfam PF02674 Colicin V production protein 4 143 1.9E-28 T 19-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 APA12_RS12450 1cc0eb4fab5dcd756ed5b42014a3a389 174 PANTHER PTHR36926 1 158 4.6E-25 T 19-04-2016 APA12_RS09970 913ac2e8ff4d8d4ae8afb5de62bece28 347 Pfam PF01594 Domain of unknown function DUF20 12 335 3.0E-47 T 19-04-2016 IPR002549 Transmembrane protein TqsA-like APA12_RS09970 913ac2e8ff4d8d4ae8afb5de62bece28 347 PANTHER PTHR21716 16 335 2.7E-63 T 19-04-2016 IPR002549 Transmembrane protein TqsA-like APA12_RS09970 913ac2e8ff4d8d4ae8afb5de62bece28 347 PANTHER PTHR21716:SF7 16 335 2.7E-63 T 19-04-2016 APA12_RS08530 e77e3fd004186bd90a7399851c5f4b14 418 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 28 308 3.0E-11 T 19-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APA12_RS08530 e77e3fd004186bd90a7399851c5f4b14 418 Gene3D G3DSA:1.20.210.10 200 371 7.4E-6 T 19-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APA12_RS08530 e77e3fd004186bd90a7399851c5f4b14 418 Gene3D G3DSA:1.20.210.10 130 190 9.6E-4 T 19-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APA12_RS08530 e77e3fd004186bd90a7399851c5f4b14 418 Gene3D G3DSA:1.20.210.10 56 122 6.5E-9 T 19-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APA12_RS08530 e77e3fd004186bd90a7399851c5f4b14 418 SUPERFAMILY SSF81442 27 403 7.98E-21 T 19-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APA12_RS08135 5f1db6e68b0cd469cac6a273c5e5c7c1 326 SUPERFAMILY SSF111331 3 314 1.4E-26 T 19-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain APA12_RS08135 5f1db6e68b0cd469cac6a273c5e5c7c1 326 Pfam PF00781 Diacylglycerol kinase catalytic domain 6 116 1.7E-10 T 19-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 APA12_RS12120 4b67e88abb0f5cead01e26bde868f763 171 Pfam PF03524 Conjugal transfer protein 2 165 3.0E-46 T 19-04-2016 IPR010258 Conjugal transfer, TrbG/VirB9/CagX APA12_RS02170 c58188505de3ebcd26a8e3cc6bd28915 428 TIGRFAM TIGR04414 hepto_Aah_TibC: autotransporter strand-loop-strand O-heptosyltransferase 39 423 7.8E-193 T 19-04-2016 IPR030929 Glycosyltransferase Aah/TibC GO:0016757 KEGG: 00540+2.4.-.- APA12_RS02170 c58188505de3ebcd26a8e3cc6bd28915 428 SUPERFAMILY SSF53756 129 425 1.44E-22 T 19-04-2016 APA12_RS02170 c58188505de3ebcd26a8e3cc6bd28915 428 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 252 380 2.3E-8 T 19-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 APA12_RS02170 c58188505de3ebcd26a8e3cc6bd28915 428 Gene3D G3DSA:3.40.50.2000 239 426 1.4E-24 T 19-04-2016 APA12_RS00340 8ed67a1ee844ae59fe6ff4c013992d2c 239 PRINTS PR01374 Gram-negative bacterial tonB protein signature 63 73 1.83E-5 T 19-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 APA12_RS00340 8ed67a1ee844ae59fe6ff4c013992d2c 239 PRINTS PR01374 Gram-negative bacterial tonB protein signature 175 193 1.83E-5 T 19-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 APA12_RS00340 8ed67a1ee844ae59fe6ff4c013992d2c 239 PRINTS PR01374 Gram-negative bacterial tonB protein signature 154 175 1.83E-5 T 19-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 APA12_RS00340 8ed67a1ee844ae59fe6ff4c013992d2c 239 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 159 235 9.2E-15 T 19-04-2016 IPR006260 TonB, C-terminal GO:0006810 APA12_RS00340 8ed67a1ee844ae59fe6ff4c013992d2c 239 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 160 237 8.6E-11 T 19-04-2016 IPR006260 TonB, C-terminal GO:0006810 APA12_RS00340 8ed67a1ee844ae59fe6ff4c013992d2c 239 Gene3D G3DSA:3.30.1150.10 122 239 3.3E-10 T 19-04-2016 APA12_RS00340 8ed67a1ee844ae59fe6ff4c013992d2c 239 SUPERFAMILY SSF74653 153 231 1.96E-16 T 19-04-2016 APA12_RS05470 ef0ca1ef5466a594a81dd5019f651d5e 353 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 15 341 1.9E-99 T 19-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 APA12_RS05470 ef0ca1ef5466a594a81dd5019f651d5e 353 PANTHER PTHR10443 12 353 4.3E-93 T 19-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 APA12_RS05470 ef0ca1ef5466a594a81dd5019f651d5e 353 Gene3D G3DSA:3.20.20.140 10 350 1.6E-109 T 19-04-2016 APA12_RS05470 ef0ca1ef5466a594a81dd5019f651d5e 353 SUPERFAMILY SSF51556 9 348 1.62E-86 T 19-04-2016 IPR032466 Metal-dependent hydrolase APA12_RS03745 cc23a19191fe567bc5fb25e209a91c70 308 SUPERFAMILY SSF103481 58 145 2.48E-6 T 19-04-2016 APA12_RS03745 cc23a19191fe567bc5fb25e209a91c70 308 SUPERFAMILY SSF103481 197 291 3.27E-12 T 19-04-2016 APA12_RS03745 cc23a19191fe567bc5fb25e209a91c70 308 PANTHER PTHR22911 17 303 2.1E-61 T 19-04-2016 APA12_RS03745 cc23a19191fe567bc5fb25e209a91c70 308 PANTHER PTHR22911:SF37 17 303 2.1E-61 T 19-04-2016 APA12_RS03745 cc23a19191fe567bc5fb25e209a91c70 308 Pfam PF00892 EamA-like transporter family 154 287 3.1E-17 T 19-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APA12_RS06905 fb42903d7855ba3ddb0cae81a0888137 258 Gene3D G3DSA:1.10.3720.10 52 244 8.6E-24 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS06905 fb42903d7855ba3ddb0cae81a0888137 258 PANTHER PTHR30151 1 257 2.6E-77 T 19-04-2016 APA12_RS06905 fb42903d7855ba3ddb0cae81a0888137 258 SUPERFAMILY SSF161098 53 236 6.15E-32 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS06905 fb42903d7855ba3ddb0cae81a0888137 258 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 244 3.1E-24 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS06905 fb42903d7855ba3ddb0cae81a0888137 258 PANTHER PTHR30151:SF22 1 257 2.6E-77 T 19-04-2016 APA12_RS01145 dee9b4d495ed94acd0815d55f2b7474a 153 PANTHER PTHR11803:SF2 1 152 5.4E-49 T 19-04-2016 APA12_RS01145 dee9b4d495ed94acd0815d55f2b7474a 153 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 5 147 4.9E-39 T 19-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APA12_RS01145 dee9b4d495ed94acd0815d55f2b7474a 153 PANTHER PTHR11803 1 152 5.4E-49 T 19-04-2016 IPR006175 YjgF/YER057c/UK114 family APA12_RS01145 dee9b4d495ed94acd0815d55f2b7474a 153 Gene3D G3DSA:3.30.1330.40 1 152 1.2E-64 T 19-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APA12_RS01145 dee9b4d495ed94acd0815d55f2b7474a 153 SUPERFAMILY SSF55298 1 152 4.4E-55 T 19-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APA12_RS05145 c4ee038dd0378cbd12b9624476717ef7 372 Pfam PF13717 zinc-ribbon domain 17 51 5.7E-10 T 19-04-2016 APA12_RS13190 c2871204629ef2088f8cd037c190e8bd 221 SUPERFAMILY SSF53474 4 209 3.41E-45 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS13190 c2871204629ef2088f8cd037c190e8bd 221 PANTHER PTHR12277 28 207 1.0E-46 T 19-04-2016 APA12_RS13190 c2871204629ef2088f8cd037c190e8bd 221 Pfam PF12146 Serine aminopeptidase, S33 36 133 2.2E-8 T 19-04-2016 IPR022742 Serine aminopeptidase, S33 APA12_RS13190 c2871204629ef2088f8cd037c190e8bd 221 PANTHER PTHR12277:SF79 28 207 1.0E-46 T 19-04-2016 APA12_RS13190 c2871204629ef2088f8cd037c190e8bd 221 Gene3D G3DSA:3.40.50.1820 3 211 1.2E-54 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS02015 6ee6faca06852f87f53a471099d0bfbc 284 SUPERFAMILY SSF52141 99 279 2.62E-33 T 19-04-2016 IPR005122 Uracil-DNA glycosylase-like APA12_RS02015 6ee6faca06852f87f53a471099d0bfbc 284 PANTHER PTHR33693 92 284 2.8E-26 T 19-04-2016 APA12_RS02015 6ee6faca06852f87f53a471099d0bfbc 284 Pfam PF03167 Uracil DNA glycosylase superfamily 123 269 1.4E-20 T 19-04-2016 IPR005122 Uracil-DNA glycosylase-like APA12_RS02015 6ee6faca06852f87f53a471099d0bfbc 284 PANTHER PTHR33693:SF1 92 284 2.8E-26 T 19-04-2016 APA12_RS02015 6ee6faca06852f87f53a471099d0bfbc 284 Gene3D G3DSA:3.40.470.10 99 279 3.1E-36 T 19-04-2016 IPR005122 Uracil-DNA glycosylase-like APA12_RS02015 6ee6faca06852f87f53a471099d0bfbc 284 SMART SM00986 122 271 1.0E-11 T 19-04-2016 IPR005122 Uracil-DNA glycosylase-like APA12_RS02015 6ee6faca06852f87f53a471099d0bfbc 284 SMART SM00987 122 271 1.0E-11 T 19-04-2016 APA12_RS03115 3b4b9ce3169bc9535772b134f0462cf1 338 Pfam PF06347 Bacterial SH3 domain 276 328 2.1E-10 T 19-04-2016 IPR010466 Protein of unknown function DUF1058 APA12_RS03115 3b4b9ce3169bc9535772b134f0462cf1 338 Pfam PF06347 Bacterial SH3 domain 167 221 1.1E-13 T 19-04-2016 IPR010466 Protein of unknown function DUF1058 APA12_RS00615 d786746b851278fa30619a9fd12a56d1 136 SUPERFAMILY SSF51344 2 83 1.19E-18 T 19-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 APA12_RS00615 d786746b851278fa30619a9fd12a56d1 136 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 8 88 8.0E-18 T 19-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 APA12_RS00615 d786746b851278fa30619a9fd12a56d1 136 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 3 82 1.1E-19 T 19-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 APA12_RS00615 d786746b851278fa30619a9fd12a56d1 136 Gene3D G3DSA:2.60.15.10 3 88 1.2E-22 T 19-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 APA12_RS00615 d786746b851278fa30619a9fd12a56d1 136 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 131 6.9E-22 T 19-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APA12_RS00615 d786746b851278fa30619a9fd12a56d1 136 PANTHER PTHR13822 3 99 2.8E-17 T 19-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APA12_RS00615 d786746b851278fa30619a9fd12a56d1 136 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 1 131 16.309 T 19-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APA12_RS10880 3663b695d640a5289cb054e70a077c7f 366 PIRSF PIRSF006468 6 366 4.5E-131 T 19-04-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 APA12_RS10880 3663b695d640a5289cb054e70a077c7f 366 PANTHER PTHR11825:SF2 15 364 1.8E-136 T 19-04-2016 APA12_RS10880 3663b695d640a5289cb054e70a077c7f 366 Gene3D G3DSA:3.30.470.10 14 182 6.6E-71 T 19-04-2016 APA12_RS10880 3663b695d640a5289cb054e70a077c7f 366 Gene3D G3DSA:3.20.10.10 183 351 5.5E-63 T 19-04-2016 APA12_RS10880 3663b695d640a5289cb054e70a077c7f 366 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 51 364 6.9E-123 T 19-04-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 APA12_RS10880 3663b695d640a5289cb054e70a077c7f 366 SUPERFAMILY SSF56752 6 362 2.75E-112 T 19-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 APA12_RS10880 3663b695d640a5289cb054e70a077c7f 366 Pfam PF01063 Amino-transferase class IV 77 319 2.6E-34 T 19-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 APA12_RS10880 3663b695d640a5289cb054e70a077c7f 366 PANTHER PTHR11825 15 364 1.8E-136 T 19-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 APA12_RS05285 7f90f1bd48e4a9373163ddf35913315a 249 Pfam PF04002 RadC-like JAB domain 130 247 6.8E-40 T 19-04-2016 IPR025657 RadC-like JAB domain APA12_RS05285 7f90f1bd48e4a9373163ddf35913315a 249 TIGRFAM TIGR00608 radc: DNA repair protein RadC 47 249 1.3E-45 T 19-04-2016 IPR001405 RadC protein APA12_RS05285 7f90f1bd48e4a9373163ddf35913315a 249 Gene3D G3DSA:3.40.140.10 128 249 4.4E-42 T 19-04-2016 APA12_RS05285 7f90f1bd48e4a9373163ddf35913315a 249 PANTHER PTHR30471 47 249 3.3E-53 T 19-04-2016 APA12_RS05285 7f90f1bd48e4a9373163ddf35913315a 249 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 198 203 - T 19-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site APA12_RS05285 7f90f1bd48e4a9373163ddf35913315a 249 SUPERFAMILY SSF102712 174 217 5.49E-5 T 19-04-2016 APA12_RS01340 b62456b526e6b5fd3f216e69e9978225 78 Pfam PF13711 Domain of unknown function (DUF4160) 9 72 4.9E-18 T 19-04-2016 IPR025427 Protein of unknown function DUF4160 APA12_RS10630 5bce25e586a617886399c992fc7cabab 761 Pfam PF07715 TonB-dependent Receptor Plug Domain 63 166 4.0E-15 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS10630 5bce25e586a617886399c992fc7cabab 761 Gene3D G3DSA:2.40.170.20 311 761 2.3E-59 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS10630 5bce25e586a617886399c992fc7cabab 761 Gene3D G3DSA:2.40.170.20 169 279 2.3E-59 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS10630 5bce25e586a617886399c992fc7cabab 761 Gene3D G3DSA:2.170.130.10 35 168 4.0E-22 T 19-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APA12_RS10630 5bce25e586a617886399c992fc7cabab 761 PANTHER PTHR32552 39 450 1.4E-29 T 19-04-2016 APA12_RS10630 5bce25e586a617886399c992fc7cabab 761 PANTHER PTHR32552 477 761 1.4E-29 T 19-04-2016 APA12_RS10630 5bce25e586a617886399c992fc7cabab 761 SUPERFAMILY SSF56935 39 761 3.0E-82 T 19-04-2016 APA12_RS10630 5bce25e586a617886399c992fc7cabab 761 Pfam PF00593 TonB dependent receptor 475 759 1.1E-17 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS04320 de2857f337eb971e3d5cc4cc11879f1d 116 Gene3D G3DSA:3.90.580.10 34 111 2.3E-11 T 19-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 APA12_RS04320 de2857f337eb971e3d5cc4cc11879f1d 116 SUPERFAMILY SSF57783 33 112 1.29E-13 T 19-04-2016 APA12_RS02065 f1b1a907d300a98331d8706e186595de 343 PANTHER PTHR30413:SF9 87 343 9.8E-38 T 19-04-2016 APA12_RS02065 f1b1a907d300a98331d8706e186595de 343 Pfam PF01061 ABC-2 type transporter 104 303 1.0E-7 T 19-04-2016 IPR013525 ABC-2 type transporter GO:0016020 APA12_RS02065 f1b1a907d300a98331d8706e186595de 343 PANTHER PTHR30413 87 343 9.8E-38 T 19-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APA12_RS07110 9a53eee224ca949418a2ac9c4f72d64b 129 Pfam PF13586 Transposase DDE domain 44 126 3.2E-19 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS07110 9a53eee224ca949418a2ac9c4f72d64b 129 PANTHER PTHR30007 1 127 4.5E-29 T 19-04-2016 APA12_RS07110 9a53eee224ca949418a2ac9c4f72d64b 129 PANTHER PTHR30007:SF22 1 127 4.5E-29 T 19-04-2016 APA12_RS04905 6c4dc903764255c56de57e167fbccfdc 714 PANTHER PTHR37947 1 697 6.3E-41 T 19-04-2016 APA12_RS04905 6c4dc903764255c56de57e167fbccfdc 714 Gene3D G3DSA:3.40.50.880 269 533 6.3E-33 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like APA12_RS04905 6c4dc903764255c56de57e167fbccfdc 714 SUPERFAMILY SSF52317 270 534 6.64E-49 T 19-04-2016 IPR029062 Class I glutamine amidotransferase-like APA12_RS08445 9aa864d3e8346ae8cc585663b37a90f7 341 PANTHER PTHR10992 49 340 3.0E-34 T 19-04-2016 APA12_RS08445 9aa864d3e8346ae8cc585663b37a90f7 341 Pfam PF12697 Alpha/beta hydrolase family 121 329 2.1E-11 T 19-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APA12_RS08445 9aa864d3e8346ae8cc585663b37a90f7 341 SUPERFAMILY SSF53474 95 339 1.47E-43 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS08445 9aa864d3e8346ae8cc585663b37a90f7 341 Gene3D G3DSA:3.40.50.1820 95 338 1.6E-39 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS02925 04050adae8420f9ee25981a514bf5fc3 141 PANTHER PTHR30007:SF21 1 115 9.2E-16 T 19-04-2016 APA12_RS02925 04050adae8420f9ee25981a514bf5fc3 141 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 11 82 1.4E-19 T 19-04-2016 IPR025161 Putative transposase IS4/IS5 family APA12_RS02925 04050adae8420f9ee25981a514bf5fc3 141 PANTHER PTHR30007 1 115 9.2E-16 T 19-04-2016 APA12_RS01170 e019e249f36a59388d9b0844ee0b3f56 195 Pfam PF09923 Uncharacterized protein conserved in bacteria (DUF2155) 46 134 2.4E-25 T 19-04-2016 IPR019225 Protein of unknown function DUF2155 APA12_RS06850 16af0a4681204676a0c5e94fbc10e0a7 491 PANTHER PTHR32552:SF17 47 491 1.6E-57 T 19-04-2016 APA12_RS06850 16af0a4681204676a0c5e94fbc10e0a7 491 Pfam PF00593 TonB dependent receptor 236 490 4.4E-27 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS06850 16af0a4681204676a0c5e94fbc10e0a7 491 SUPERFAMILY SSF56935 46 491 2.75E-64 T 19-04-2016 APA12_RS06850 16af0a4681204676a0c5e94fbc10e0a7 491 PANTHER PTHR32552 47 491 1.6E-57 T 19-04-2016 APA12_RS06850 16af0a4681204676a0c5e94fbc10e0a7 491 Gene3D G3DSA:2.40.170.20 47 491 9.5E-102 T 19-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APA12_RS08005 37fc1d3330c63b54e4b6aa31ec398cf9 447 Pfam PF13403 Hint domain 99 238 3.0E-40 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS08005 37fc1d3330c63b54e4b6aa31ec398cf9 447 SUPERFAMILY SSF51294 100 216 4.45E-8 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS08005 37fc1d3330c63b54e4b6aa31ec398cf9 447 Gene3D G3DSA:2.170.16.10 100 261 1.8E-4 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS03235 1019d720c8cbbe4c0d09ea6da4bff83c 321 Gene3D G3DSA:3.60.10.10 47 236 2.5E-8 T 19-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APA12_RS03235 1019d720c8cbbe4c0d09ea6da4bff83c 321 SUPERFAMILY SSF56219 48 312 4.19E-23 T 19-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APA12_RS03235 1019d720c8cbbe4c0d09ea6da4bff83c 321 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 54 303 2.3E-10 T 19-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APA12_RS01290 acc6b7a1e8f715102b3ed0fc267ac013 195 PANTHER PTHR23407 12 194 1.4E-29 T 19-04-2016 APA12_RS01290 acc6b7a1e8f715102b3ed0fc267ac013 195 Gene3D G3DSA:3.40.50.10420 20 194 7.8E-41 T 19-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain APA12_RS01290 acc6b7a1e8f715102b3ed0fc267ac013 195 SUPERFAMILY SSF100950 20 194 4.19E-41 T 19-04-2016 APA12_RS01290 acc6b7a1e8f715102b3ed0fc267ac013 195 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 20 188 4.6E-24 T 19-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase APA12_RS01290 acc6b7a1e8f715102b3ed0fc267ac013 195 PIRSF PIRSF006806 15 191 2.0E-24 T 19-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase APA12_RS01290 acc6b7a1e8f715102b3ed0fc267ac013 195 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 20 188 2.4E-38 T 19-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase APA12_RS01290 acc6b7a1e8f715102b3ed0fc267ac013 195 PANTHER PTHR23407:SF1 12 194 1.4E-29 T 19-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase APA12_RS15010 de3429b85890ec5cb8a8f6131ff1a109 228 SMART SM00564 1 25 180.0 T 19-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APA12_RS15010 de3429b85890ec5cb8a8f6131ff1a109 228 SMART SM00564 44 76 3.3E-5 T 19-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APA12_RS15010 de3429b85890ec5cb8a8f6131ff1a109 228 SMART SM00564 95 133 3.5E-4 T 19-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APA12_RS15010 de3429b85890ec5cb8a8f6131ff1a109 228 PANTHER PTHR32303 152 228 1.0E-29 T 19-04-2016 APA12_RS15010 de3429b85890ec5cb8a8f6131ff1a109 228 PANTHER PTHR32303 1 135 1.0E-29 T 19-04-2016 APA12_RS15010 de3429b85890ec5cb8a8f6131ff1a109 228 Pfam PF13360 PQQ-like domain 11 137 1.5E-12 T 19-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat APA12_RS15010 de3429b85890ec5cb8a8f6131ff1a109 228 Gene3D G3DSA:2.140.10.10 1 228 1.8E-57 T 19-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain APA12_RS15010 de3429b85890ec5cb8a8f6131ff1a109 228 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 175 196 - T 19-04-2016 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 APA12_RS15010 de3429b85890ec5cb8a8f6131ff1a109 228 SUPERFAMILY SSF50998 1 228 2.09E-57 T 19-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APA12_RS15010 de3429b85890ec5cb8a8f6131ff1a109 228 PANTHER PTHR32303:SF2 152 228 1.0E-29 T 19-04-2016 APA12_RS15010 de3429b85890ec5cb8a8f6131ff1a109 228 PANTHER PTHR32303:SF2 1 135 1.0E-29 T 19-04-2016 APA12_RS07915 3111b3a9ddd779d7c2d140bcdce742a3 189 Gene3D G3DSA:3.40.50.1240 4 102 9.0E-6 T 19-04-2016 IPR029033 Histidine phosphatase superfamily APA12_RS07915 3111b3a9ddd779d7c2d140bcdce742a3 189 SUPERFAMILY SSF53254 3 107 8.35E-8 T 19-04-2016 IPR029033 Histidine phosphatase superfamily APA12_RS01060 aee30af24f65317d21236b45f2bf16bd 175 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 173 36.712 T 19-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 APA12_RS01060 aee30af24f65317d21236b45f2bf16bd 175 SUPERFAMILY SSF50324 6 172 3.92E-66 T 19-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 APA12_RS01060 aee30af24f65317d21236b45f2bf16bd 175 PANTHER PTHR10286:SF15 1 173 1.7E-70 T 19-04-2016 APA12_RS01060 aee30af24f65317d21236b45f2bf16bd 175 Gene3D G3DSA:3.90.80.10 5 173 3.0E-61 T 19-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 APA12_RS01060 aee30af24f65317d21236b45f2bf16bd 175 PANTHER PTHR10286 1 173 1.7E-70 T 19-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 APA12_RS01060 aee30af24f65317d21236b45f2bf16bd 175 Pfam PF00719 Inorganic pyrophosphatase 18 171 3.3E-55 T 19-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 APA12_RS11225 c737ca38e53e91093cdb363bf533cb32 191 SUPERFAMILY SSF54427 11 177 1.38E-26 T 19-04-2016 IPR032710 NTF2-like domain APA12_RS11225 c737ca38e53e91093cdb363bf533cb32 191 Gene3D G3DSA:3.10.450.50 9 178 1.2E-32 T 19-04-2016 IPR032710 NTF2-like domain APA12_RS11225 c737ca38e53e91093cdb363bf533cb32 191 Pfam PF13577 SnoaL-like domain 20 162 1.9E-16 T 19-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain APA12_RS10270 f04e8844d4c51dff310d8e38f70210c6 86 Pfam PF14076 Domain of unknown function (DUF4258) 5 74 1.4E-8 T 19-04-2016 IPR025354 Protein of unknown function DUF4258 APA12_RS03940 a1d717f2b8a22a9deeeed59bd1ea2752 301 Pfam PF01066 CDP-alcohol phosphatidyltransferase 42 105 4.6E-13 T 19-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 APA12_RS03940 a1d717f2b8a22a9deeeed59bd1ea2752 301 PANTHER PTHR15362:SF2 33 172 1.6E-25 T 19-04-2016 APA12_RS03940 a1d717f2b8a22a9deeeed59bd1ea2752 301 PANTHER PTHR15362 33 172 1.6E-25 T 19-04-2016 APA12_RS03940 a1d717f2b8a22a9deeeed59bd1ea2752 301 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 83 105 - T 19-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 APA12_RS03940 a1d717f2b8a22a9deeeed59bd1ea2752 301 Pfam PF08009 CDP-alcohol phosphatidyltransferase 2 233 269 1.5E-11 T 19-04-2016 IPR012616 CDP-alcohol phosphatidyltransferase, C-terminal APA12_RS11995 2f07ae5970f51ff2df2cee394d953d87 93 Gene3D G3DSA:3.40.30.10 1 83 6.1E-29 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS11995 2f07ae5970f51ff2df2cee394d953d87 93 PANTHER PTHR30041:SF4 1 83 1.6E-19 T 19-04-2016 APA12_RS11995 2f07ae5970f51ff2df2cee394d953d87 93 SUPERFAMILY SSF52833 2 83 1.46E-19 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS11995 2f07ae5970f51ff2df2cee394d953d87 93 PANTHER PTHR30041 1 83 1.6E-19 T 19-04-2016 APA12_RS02880 e906343ca64fd530fff4a1618df345bf 380 Gene3D G3DSA:2.40.110.10 118 212 8.1E-37 T 19-04-2016 APA12_RS02880 e906343ca64fd530fff4a1618df345bf 380 Gene3D G3DSA:1.10.540.10 3 114 4.7E-33 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 APA12_RS02880 e906343ca64fd530fff4a1618df345bf 380 SUPERFAMILY SSF56645 2 238 6.68E-72 T 19-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 APA12_RS02880 e906343ca64fd530fff4a1618df345bf 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 112 1.2E-26 T 19-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 APA12_RS02880 e906343ca64fd530fff4a1618df345bf 380 PANTHER PTHR10909 1 376 2.4E-145 T 19-04-2016 APA12_RS02880 e906343ca64fd530fff4a1618df345bf 380 SUPERFAMILY SSF47203 224 376 1.61E-56 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APA12_RS02880 e906343ca64fd530fff4a1618df345bf 380 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 225 373 9.8E-49 T 19-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APA12_RS02880 e906343ca64fd530fff4a1618df345bf 380 PANTHER PTHR10909:SF305 1 376 2.4E-145 T 19-04-2016 APA12_RS02880 e906343ca64fd530fff4a1618df345bf 380 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 118 213 3.2E-26 T 19-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 APA12_RS02880 e906343ca64fd530fff4a1618df345bf 380 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 120 132 - T 19-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 APA12_RS02880 e906343ca64fd530fff4a1618df345bf 380 Gene3D G3DSA:1.20.140.10 213 377 2.3E-64 T 19-04-2016 APA12_RS02870 2d7bfb985e219addd88adc2b8a8cbd3d 197 Gene3D G3DSA:3.40.810.20 2 189 2.3E-34 T 19-04-2016 APA12_RS02870 2d7bfb985e219addd88adc2b8a8cbd3d 197 PANTHER PTHR13707:SF38 1 188 1.1E-49 T 19-04-2016 APA12_RS02870 2d7bfb985e219addd88adc2b8a8cbd3d 197 SUPERFAMILY SSF100950 1 196 1.76E-44 T 19-04-2016 APA12_RS02870 2d7bfb985e219addd88adc2b8a8cbd3d 197 PANTHER PTHR13707 1 188 1.1E-49 T 19-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 APA12_RS09985 6e06e0978c3c5d5d09c833d8f76ac683 272 Pfam PF04402 Protein of unknown function (DUF541) 73 267 2.4E-22 T 19-04-2016 IPR007497 Protein of unknown function DUF541 APA12_RS05700 4321ba3fd9f716e021755a70d6310afa 426 PANTHER PTHR34475 16 343 5.9E-34 T 19-04-2016 APA12_RS05700 4321ba3fd9f716e021755a70d6310afa 426 Pfam PF13464 Domain of unknown function (DUF4115) 262 332 3.5E-16 T 19-04-2016 IPR025194 Domain of unknown function DUF4115 APA12_RS05700 4321ba3fd9f716e021755a70d6310afa 426 PANTHER PTHR34475:SF1 16 343 5.9E-34 T 19-04-2016 APA12_RS05700 4321ba3fd9f716e021755a70d6310afa 426 SUPERFAMILY SSF47413 29 91 1.13E-6 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APA12_RS05700 4321ba3fd9f716e021755a70d6310afa 426 Pfam PF13413 Helix-turn-helix domain 33 92 3.7E-21 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APA12_RS05700 4321ba3fd9f716e021755a70d6310afa 426 Gene3D G3DSA:1.10.260.40 29 104 1.2E-8 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APA12_RS05700 4321ba3fd9f716e021755a70d6310afa 426 SMART SM00530 32 93 2.4E-5 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APA12_RS11695 c016816302c0cf7b57b6e3c2f501fa49 287 PANTHER PTHR30413:SF9 33 287 1.2E-32 T 19-04-2016 APA12_RS11695 c016816302c0cf7b57b6e3c2f501fa49 287 Pfam PF01061 ABC-2 type transporter 47 247 7.2E-12 T 19-04-2016 IPR013525 ABC-2 type transporter GO:0016020 APA12_RS11695 c016816302c0cf7b57b6e3c2f501fa49 287 PANTHER PTHR30413 33 287 1.2E-32 T 19-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APA12_RS02820 62c2cdb91ea7b5d22139e497bef193c3 564 SUPERFAMILY SSF51294 217 353 3.34E-11 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS02820 62c2cdb91ea7b5d22139e497bef193c3 564 Pfam PF13403 Hint domain 216 355 3.7E-43 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS02820 62c2cdb91ea7b5d22139e497bef193c3 564 Gene3D G3DSA:2.170.16.10 217 328 1.8E-4 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS00400 03c5de915e0c90efecf14c8a09cb6e45 259 PANTHER PTHR12677 84 257 6.2E-18 T 19-04-2016 IPR015414 Transmembrane protein TMEM64/TMEM41 GO:0016021 APA12_RS00400 03c5de915e0c90efecf14c8a09cb6e45 259 Pfam PF09335 SNARE associated Golgi protein 105 221 2.7E-18 T 19-04-2016 IPR032816 SNARE associated Golgi protein APA12_RS02460 e05b2317cac72c49597fac80ed9bbedb 274 Pfam PF03724 META domain 141 269 1.2E-15 T 19-04-2016 IPR005184 Domain of unknown function DUF306, Meta/HslJ APA12_RS09350 c1e7e2f3305433ccac5233c7e67145ac 694 PANTHER PTHR30509 31 265 1.3E-68 T 19-04-2016 APA12_RS09350 c1e7e2f3305433ccac5233c7e67145ac 694 PANTHER PTHR30509 318 656 1.3E-68 T 19-04-2016 APA12_RS09350 c1e7e2f3305433ccac5233c7e67145ac 694 Pfam PF04632 Fusaric acid resistance protein family 31 612 1.6E-118 T 19-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 APA12_RS09350 c1e7e2f3305433ccac5233c7e67145ac 694 PANTHER PTHR30509:SF1 31 265 1.3E-68 T 19-04-2016 APA12_RS09350 c1e7e2f3305433ccac5233c7e67145ac 694 PANTHER PTHR30509:SF1 318 656 1.3E-68 T 19-04-2016 APA12_RS08775 a4179d44a71f74ba96c72eadc18d93c7 301 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 126 270 9.0E-26 T 19-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 APA12_RS08775 a4179d44a71f74ba96c72eadc18d93c7 301 Gene3D G3DSA:3.40.50.2000 133 298 4.2E-38 T 19-04-2016 APA12_RS08775 a4179d44a71f74ba96c72eadc18d93c7 301 PANTHER PTHR30160 1 269 2.2E-26 T 19-04-2016 APA12_RS08775 a4179d44a71f74ba96c72eadc18d93c7 301 Gene3D G3DSA:3.40.50.2000 1 105 2.4E-15 T 19-04-2016 APA12_RS08775 a4179d44a71f74ba96c72eadc18d93c7 301 PANTHER PTHR30160:SF7 1 269 2.2E-26 T 19-04-2016 APA12_RS08775 a4179d44a71f74ba96c72eadc18d93c7 301 SUPERFAMILY SSF53756 1 298 9.84E-65 T 19-04-2016 APA12_RS05865 f81b4d8b0de373cc4ed321d081e67187 264 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 25 217 3.8E-37 T 19-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 APA12_RS05865 f81b4d8b0de373cc4ed321d081e67187 264 Gene3D G3DSA:3.40.50.620 3 213 1.3E-50 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS05865 f81b4d8b0de373cc4ed321d081e67187 264 PANTHER PTHR23293 169 264 3.5E-57 T 19-04-2016 APA12_RS05865 f81b4d8b0de373cc4ed321d081e67187 264 PANTHER PTHR23293 2 149 3.5E-57 T 19-04-2016 APA12_RS05865 f81b4d8b0de373cc4ed321d081e67187 264 PANTHER PTHR23293:SF6 169 264 3.5E-57 T 19-04-2016 APA12_RS05865 f81b4d8b0de373cc4ed321d081e67187 264 PANTHER PTHR23293:SF6 2 149 3.5E-57 T 19-04-2016 APA12_RS05865 f81b4d8b0de373cc4ed321d081e67187 264 SUPERFAMILY SSF52402 2 201 7.18E-54 T 19-04-2016 APA12_RS07930 acde0aa0a496421c6a9169377727e393 238 Pfam PF06912 Protein of unknown function (DUF1275) 27 228 3.7E-30 T 19-04-2016 IPR010699 Protein of unknown function DUF1275 APA12_RS10495 749fe792e3865d0130d66fadd5e804e0 209 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 129 205 5.9E-16 T 19-04-2016 IPR006260 TonB, C-terminal GO:0006810 APA12_RS10495 749fe792e3865d0130d66fadd5e804e0 209 SUPERFAMILY SSF74653 123 201 4.19E-17 T 19-04-2016 APA12_RS10495 749fe792e3865d0130d66fadd5e804e0 209 PRINTS PR01217 Proline rich extensin signature 80 101 7.8E-9 T 19-04-2016 APA12_RS10495 749fe792e3865d0130d66fadd5e804e0 209 PRINTS PR01217 Proline rich extensin signature 31 43 7.8E-9 T 19-04-2016 APA12_RS10495 749fe792e3865d0130d66fadd5e804e0 209 PRINTS PR01217 Proline rich extensin signature 65 77 7.8E-9 T 19-04-2016 APA12_RS10495 749fe792e3865d0130d66fadd5e804e0 209 PRINTS PR01217 Proline rich extensin signature 45 61 7.8E-9 T 19-04-2016 APA12_RS10495 749fe792e3865d0130d66fadd5e804e0 209 Gene3D G3DSA:3.30.1150.10 99 209 7.1E-11 T 19-04-2016 APA12_RS10495 749fe792e3865d0130d66fadd5e804e0 209 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 130 207 1.1E-11 T 19-04-2016 IPR006260 TonB, C-terminal GO:0006810 APA12_RS06050 421ec4c44d5468a0a199952024a33063 155 PANTHER PTHR34039:SF1 39 145 7.2E-24 T 19-04-2016 APA12_RS06050 421ec4c44d5468a0a199952024a33063 155 PANTHER PTHR34039 39 145 7.2E-24 T 19-04-2016 APA12_RS06050 421ec4c44d5468a0a199952024a33063 155 Hamap MF_00048 UPF0102 protein YraN [yraN]. 43 152 17.768 T 19-04-2016 IPR003509 Uncharacterised protein family UPF0102 APA12_RS06050 421ec4c44d5468a0a199952024a33063 155 Gene3D G3DSA:3.40.1350.10 50 153 2.6E-29 T 19-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 APA12_RS06050 421ec4c44d5468a0a199952024a33063 155 Pfam PF02021 Uncharacterised protein family UPF0102 50 137 7.3E-21 T 19-04-2016 IPR003509 Uncharacterised protein family UPF0102 APA12_RS06050 421ec4c44d5468a0a199952024a33063 155 SUPERFAMILY SSF52980 44 147 1.61E-18 T 19-04-2016 IPR011335 Restriction endonuclease type II-like APA12_RS08660 ca028d50e132640ebf919db394a3aea9 67 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 10 55 12.436 T 19-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APA12_RS08660 ca028d50e132640ebf919db394a3aea9 67 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 13 36 5.0E-6 T 19-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APA12_RS08660 ca028d50e132640ebf919db394a3aea9 67 Pfam PF01165 Ribosomal protein S21 2 55 3.2E-20 T 19-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APA12_RS08660 ca028d50e132640ebf919db394a3aea9 67 PANTHER PTHR21109:SF3 3 67 4.7E-29 T 19-04-2016 APA12_RS08660 ca028d50e132640ebf919db394a3aea9 67 PANTHER PTHR21109 3 67 4.7E-29 T 19-04-2016 APA12_RS08660 ca028d50e132640ebf919db394a3aea9 67 ProSitePatterns PS01181 Ribosomal protein S21 signature. 11 23 - T 19-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS08660 ca028d50e132640ebf919db394a3aea9 67 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 57 1.2E-21 T 19-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APA12_RS01345 83b141db38cf159a3c79b2ff863b6471 64 Pfam PF10387 Protein of unknown function (DUF2442) 5 62 2.0E-17 T 19-04-2016 IPR018841 Protein of unknown function DUF2442 APA12_RS12685 3354634abd976732ba37e5f3edaa0ee3 154 Gene3D G3DSA:3.30.300.20 27 141 1.3E-31 T 19-04-2016 IPR015946 K homology domain-like, alpha/beta APA12_RS12685 3354634abd976732ba37e5f3edaa0ee3 154 SUPERFAMILY SSF89919 26 136 2.62E-29 T 19-04-2016 IPR023799 Ribosome-binding factor A domain APA12_RS12685 3354634abd976732ba37e5f3edaa0ee3 154 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 28 136 2.4E-20 T 19-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 APA12_RS12685 3354634abd976732ba37e5f3edaa0ee3 154 PANTHER PTHR33515 25 154 1.9E-28 T 19-04-2016 APA12_RS12685 3354634abd976732ba37e5f3edaa0ee3 154 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 32 118 6.0E-27 T 19-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 APA12_RS12685 3354634abd976732ba37e5f3edaa0ee3 154 Pfam PF02033 Ribosome-binding factor A 29 134 1.2E-24 T 19-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 APA12_RS12685 3354634abd976732ba37e5f3edaa0ee3 154 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 25 141 19.845 T 19-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 APA12_RS00130 38d12a9a0d0155fe33aa51761989bf9d 471 PANTHER PTHR10160:SF24 1 471 1.1E-193 T 19-04-2016 APA12_RS00130 38d12a9a0d0155fe33aa51761989bf9d 471 PANTHER PTHR10160 1 471 1.1E-193 T 19-04-2016 APA12_RS00130 38d12a9a0d0155fe33aa51761989bf9d 471 Pfam PF02233 NAD(P) transhydrogenase beta subunit 11 463 2.7E-165 T 19-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 APA12_RS00130 38d12a9a0d0155fe33aa51761989bf9d 471 PIRSF PIRSF000204 2 467 1.7E-147 T 19-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 APA12_RS00130 38d12a9a0d0155fe33aa51761989bf9d 471 SUPERFAMILY SSF52467 292 466 3.87E-69 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APA12_RS00130 38d12a9a0d0155fe33aa51761989bf9d 471 Gene3D G3DSA:3.40.50.1220 291 467 4.7E-81 T 19-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APA12_RS02630 cda474df8a6c5647a4df889a198c2ea3 333 Pfam PF09979 Uncharacterized protein conserved in bacteria (DUF2213) 32 197 1.2E-47 T 19-04-2016 IPR016913 Uncharacterised conserved protein UCP029215 APA12_RS08060 369b507d8232418cfd74b2b7c3ea41b1 411 Gene3D G3DSA:1.20.1600.10 82 408 2.2E-33 T 19-04-2016 APA12_RS08060 369b507d8232418cfd74b2b7c3ea41b1 411 PANTHER PTHR30203 63 409 9.0E-22 T 19-04-2016 APA12_RS08060 369b507d8232418cfd74b2b7c3ea41b1 411 Pfam PF02321 Outer membrane efflux protein 235 408 2.7E-21 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APA12_RS08060 369b507d8232418cfd74b2b7c3ea41b1 411 Pfam PF02321 Outer membrane efflux protein 53 209 6.3E-10 T 19-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APA12_RS08060 369b507d8232418cfd74b2b7c3ea41b1 411 SUPERFAMILY SSF56954 4 409 7.85E-45 T 19-04-2016 APA12_RS01710 a5f12f0445c0cd1ccea46192981c2476 266 Pfam PF13884 Chaperone of endosialidase 193 256 1.3E-7 T 19-04-2016 IPR030392 Intramolecular chaperone auto-processing domain APA12_RS12295 b98a6f0c3c49c4f23947b1ec066b638a 116 SUPERFAMILY SSF55298 7 113 5.5E-25 T 19-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APA12_RS12295 b98a6f0c3c49c4f23947b1ec066b638a 116 PANTHER PTHR11803:SF11 6 113 1.9E-26 T 19-04-2016 APA12_RS12295 b98a6f0c3c49c4f23947b1ec066b638a 116 Gene3D G3DSA:3.30.1330.40 13 113 7.3E-21 T 19-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APA12_RS12295 b98a6f0c3c49c4f23947b1ec066b638a 116 Pfam PF01042 Endoribonuclease L-PSP 14 113 8.7E-19 T 19-04-2016 IPR006175 YjgF/YER057c/UK114 family APA12_RS12295 b98a6f0c3c49c4f23947b1ec066b638a 116 PANTHER PTHR11803 6 113 1.9E-26 T 19-04-2016 IPR006175 YjgF/YER057c/UK114 family APA12_RS08515 72d4277d1793b2dd5f955f1b82921cc7 323 PANTHER PTHR41542 69 321 3.9E-36 T 19-04-2016 APA12_RS08515 72d4277d1793b2dd5f955f1b82921cc7 323 SUPERFAMILY SSF54427 197 321 8.0E-23 T 19-04-2016 IPR032710 NTF2-like domain APA12_RS08515 72d4277d1793b2dd5f955f1b82921cc7 323 Pfam PF04280 Tim44-like domain 197 320 8.0E-28 T 19-04-2016 IPR007379 Tim44-like domain APA12_RS08515 72d4277d1793b2dd5f955f1b82921cc7 323 PANTHER PTHR41542 2 52 3.9E-36 T 19-04-2016 APA12_RS08515 72d4277d1793b2dd5f955f1b82921cc7 323 SMART SM00978 182 320 3.2E-33 T 19-04-2016 IPR007379 Tim44-like domain APA12_RS08515 72d4277d1793b2dd5f955f1b82921cc7 323 PANTHER PTHR41542:SF1 2 52 3.9E-36 T 19-04-2016 APA12_RS08515 72d4277d1793b2dd5f955f1b82921cc7 323 PANTHER PTHR41542:SF1 69 321 3.9E-36 T 19-04-2016 APA12_RS11355 c3412e64ea2e91af1b985a049df0ea72 545 SUPERFAMILY SSF54373 380 447 1.57E-6 T 19-04-2016 APA12_RS11355 c3412e64ea2e91af1b985a049df0ea72 545 Gene3D G3DSA:3.50.50.60 8 149 1.1E-60 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS11355 c3412e64ea2e91af1b985a049df0ea72 545 Gene3D G3DSA:3.50.50.60 450 541 1.1E-60 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS11355 c3412e64ea2e91af1b985a049df0ea72 545 Gene3D G3DSA:3.50.50.60 221 326 1.1E-60 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS11355 c3412e64ea2e91af1b985a049df0ea72 545 PANTHER PTHR11552 5 545 3.9E-70 T 19-04-2016 APA12_RS11355 c3412e64ea2e91af1b985a049df0ea72 545 SUPERFAMILY SSF51905 482 542 3.21E-59 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS11355 c3412e64ea2e91af1b985a049df0ea72 545 SUPERFAMILY SSF51905 7 328 3.21E-59 T 19-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APA12_RS11355 c3412e64ea2e91af1b985a049df0ea72 545 PANTHER PTHR11552:SF139 5 545 3.9E-70 T 19-04-2016 APA12_RS11355 c3412e64ea2e91af1b985a049df0ea72 545 Pfam PF01266 FAD dependent oxidoreductase 11 43 5.2E-6 T 19-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 APA12_RS11355 c3412e64ea2e91af1b985a049df0ea72 545 Pfam PF05199 GMC oxidoreductase 414 533 1.4E-18 T 19-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 APA12_RS01615 fc5669c9ece29a4d71ca14b37500b7a3 551 Pfam PF07396 Phosphate-selective porin O and P 168 551 9.2E-39 T 19-04-2016 IPR010870 Phosphate-selective porin O/P APA12_RS01615 fc5669c9ece29a4d71ca14b37500b7a3 551 Gene3D G3DSA:2.40.160.10 141 551 2.5E-102 T 19-04-2016 IPR023614 Porin domain APA12_RS13045 d968500b425872fd294eecc67fc4ec3e 137 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 99 123 - T 19-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site APA12_RS13045 d968500b425872fd294eecc67fc4ec3e 137 PANTHER PTHR33823 1 132 5.6E-44 T 19-04-2016 APA12_RS13045 d968500b425872fd294eecc67fc4ec3e 137 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 17 125 1.6E-42 T 19-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 APA12_RS13045 d968500b425872fd294eecc67fc4ec3e 137 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 94 129 4.9E-12 T 19-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 APA12_RS13045 d968500b425872fd294eecc67fc4ec3e 137 SUPERFAMILY SSF57716 96 134 3.42E-9 T 19-04-2016 APA12_RS13045 d968500b425872fd294eecc67fc4ec3e 137 PANTHER PTHR33823:SF2 1 132 5.6E-44 T 19-04-2016 APA12_RS13045 d968500b425872fd294eecc67fc4ec3e 137 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 13 135 27.224 T 19-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 APA12_RS13045 d968500b425872fd294eecc67fc4ec3e 137 SUPERFAMILY SSF109635 2 95 5.36E-31 T 19-04-2016 APA12_RS00555 e6840ce7f0db4f03a356dd3a2d8c3416 220 PANTHER PTHR30353 4 214 3.5E-40 T 19-04-2016 IPR032818 DedA family APA12_RS00555 e6840ce7f0db4f03a356dd3a2d8c3416 220 Pfam PF09335 SNARE associated Golgi protein 35 162 2.6E-13 T 19-04-2016 IPR032816 SNARE associated Golgi protein APA12_RS00555 e6840ce7f0db4f03a356dd3a2d8c3416 220 PANTHER PTHR30353:SF2 4 214 3.5E-40 T 19-04-2016 APA12_RS01765 feb277331ff9ebf7ef66d6e4bf68817c 241 Pfam PF08795 Putative papain-like cysteine peptidase (DUF1796) 36 170 5.7E-31 T 19-04-2016 IPR014903 Protein of unknown function DUF1796 APA12_RS00830 0d9d099da308d0500d3d34d2ca7ca2e9 333 PANTHER PTHR34580 1 328 1.3E-29 T 19-04-2016 APA12_RS00830 0d9d099da308d0500d3d34d2ca7ca2e9 333 Pfam PF13280 WYL domain 150 318 9.6E-27 T 19-04-2016 IPR026881 WYL domain APA12_RS04810 52f416f55fc56ce3d29aa486afd6e2d4 222 PANTHER PTHR23359 1 216 2.8E-97 T 19-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APA12_RS04810 52f416f55fc56ce3d29aa486afd6e2d4 222 Pfam PF05191 Adenylate kinase, active site lid 127 163 2.6E-13 T 19-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APA12_RS04810 52f416f55fc56ce3d29aa486afd6e2d4 222 Pfam PF00406 Adenylate kinase 6 191 3.2E-58 T 19-04-2016 APA12_RS04810 52f416f55fc56ce3d29aa486afd6e2d4 222 SUPERFAMILY SSF57774 126 163 1.14E-12 T 19-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APA12_RS04810 52f416f55fc56ce3d29aa486afd6e2d4 222 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 19-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APA12_RS04810 52f416f55fc56ce3d29aa486afd6e2d4 222 Gene3D G3DSA:3.40.50.300 1 212 3.7E-77 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS04810 52f416f55fc56ce3d29aa486afd6e2d4 222 SUPERFAMILY SSF52540 1 127 9.31E-43 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS04810 52f416f55fc56ce3d29aa486afd6e2d4 222 SUPERFAMILY SSF52540 163 214 9.31E-43 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS04810 52f416f55fc56ce3d29aa486afd6e2d4 222 PRINTS PR00094 Adenylate kinase signature 81 97 2.6E-33 T 19-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APA12_RS04810 52f416f55fc56ce3d29aa486afd6e2d4 222 PRINTS PR00094 Adenylate kinase signature 4 17 2.6E-33 T 19-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APA12_RS04810 52f416f55fc56ce3d29aa486afd6e2d4 222 PRINTS PR00094 Adenylate kinase signature 161 176 2.6E-33 T 19-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APA12_RS04810 52f416f55fc56ce3d29aa486afd6e2d4 222 PRINTS PR00094 Adenylate kinase signature 32 46 2.6E-33 T 19-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APA12_RS04810 52f416f55fc56ce3d29aa486afd6e2d4 222 PRINTS PR00094 Adenylate kinase signature 178 192 2.6E-33 T 19-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APA12_RS04810 52f416f55fc56ce3d29aa486afd6e2d4 222 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 5.0E-78 T 19-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APA12_RS04810 52f416f55fc56ce3d29aa486afd6e2d4 222 Hamap MF_00235 Adenylate kinase [adk]. 1 214 49.798 T 19-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APA12_RS15755 5e0f1f6b1795faa733968b2e0750e3b6 71 Pfam PF01609 Transposase DDE domain 4 59 8.4E-9 T 19-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 APA12_RS06830 1d88aa61469bf818c2ecedebfac2c195 235 PANTHER PTHR34219:SF3 1 213 4.4E-37 T 19-04-2016 APA12_RS06830 1d88aa61469bf818c2ecedebfac2c195 235 PANTHER PTHR34219 1 213 4.4E-37 T 19-04-2016 APA12_RS06830 1d88aa61469bf818c2ecedebfac2c195 235 Pfam PF03929 PepSY-associated TM region 1 205 3.3E-27 T 19-04-2016 IPR005625 PepSY-associated TM protein APA12_RS01020 f0bf60b935a3e6fb47ccb9cee339c55c 229 Pfam PF13432 Tetratricopeptide repeat 124 171 4.5E-5 T 19-04-2016 APA12_RS01020 f0bf60b935a3e6fb47ccb9cee339c55c 229 Gene3D G3DSA:1.25.40.10 110 217 3.7E-16 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS01020 f0bf60b935a3e6fb47ccb9cee339c55c 229 SUPERFAMILY SSF48452 74 208 2.04E-16 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS01020 f0bf60b935a3e6fb47ccb9cee339c55c 229 SMART SM00028 177 210 0.8 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APA12_RS01020 f0bf60b935a3e6fb47ccb9cee339c55c 229 SMART SM00028 109 142 110.0 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APA12_RS01020 f0bf60b935a3e6fb47ccb9cee339c55c 229 SMART SM00028 143 176 6.0 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APA12_RS01205 3b439638f59fedfac368e8027f70f348 150 SUPERFAMILY SSF46955 25 79 3.39E-5 T 19-04-2016 IPR009061 Putative DNA-binding domain APA12_RS09315 2746c1fcdea9ea7117d16aab082e693c 156 Gene3D G3DSA:2.60.40.1470 27 150 5.0E-45 T 19-04-2016 IPR007474 ApaG domain APA12_RS09315 2746c1fcdea9ea7117d16aab082e693c 156 PANTHER PTHR14289 29 149 4.1E-50 T 19-04-2016 APA12_RS09315 2746c1fcdea9ea7117d16aab082e693c 156 Pfam PF04379 Protein of unknown function (DUF525) 45 129 7.9E-32 T 19-04-2016 IPR007474 ApaG domain APA12_RS09315 2746c1fcdea9ea7117d16aab082e693c 156 SUPERFAMILY SSF110069 30 153 6.41E-45 T 19-04-2016 IPR007474 ApaG domain APA12_RS09315 2746c1fcdea9ea7117d16aab082e693c 156 Hamap MF_00791 Protein ApaG [apaG]. 27 156 29.403 T 19-04-2016 IPR023065 Uncharacterised protein family ApaG APA12_RS03640 8fa7aa8ab87298c37eeadaa5d0be1b82 148 Gene3D G3DSA:3.40.50.10110 1 140 3.8E-38 T 19-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 APA12_RS03640 8fa7aa8ab87298c37eeadaa5d0be1b82 148 SUPERFAMILY SSF102400 1 139 8.5E-36 T 19-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 APA12_RS03640 8fa7aa8ab87298c37eeadaa5d0be1b82 148 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 134 1.2E-33 T 19-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 APA12_RS13400 4a272f7bb285c0787eaa00aafa3a2eb5 939 SUPERFAMILY SSF53756 539 907 8.52E-43 T 19-04-2016 APA12_RS13400 4a272f7bb285c0787eaa00aafa3a2eb5 939 Pfam PF13692 Glycosyl transferases group 1 376 491 5.7E-11 T 19-04-2016 APA12_RS13400 4a272f7bb285c0787eaa00aafa3a2eb5 939 SUPERFAMILY SSF53756 284 518 2.93E-19 T 19-04-2016 APA12_RS13400 4a272f7bb285c0787eaa00aafa3a2eb5 939 Pfam PF13579 Glycosyl transferase 4-like domain 550 744 3.3E-22 T 19-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APA12_RS13400 4a272f7bb285c0787eaa00aafa3a2eb5 939 Gene3D G3DSA:3.40.50.2000 759 901 1.8E-12 T 19-04-2016 APA12_RS13400 4a272f7bb285c0787eaa00aafa3a2eb5 939 PANTHER PTHR12526 505 680 1.7E-17 T 19-04-2016 APA12_RS13400 4a272f7bb285c0787eaa00aafa3a2eb5 939 PANTHER PTHR12526 6 14 1.7E-17 T 19-04-2016 APA12_RS13400 4a272f7bb285c0787eaa00aafa3a2eb5 939 PANTHER PTHR12526 705 903 1.7E-17 T 19-04-2016 APA12_RS13400 4a272f7bb285c0787eaa00aafa3a2eb5 939 Pfam PF00534 Glycosyl transferases group 1 759 909 2.7E-17 T 19-04-2016 IPR001296 Glycosyl transferase, family 1 APA12_RS12465 ed1a311e04325faf40138e82fa616b67 569 Pfam PF02470 MlaD protein 315 407 6.3E-9 T 19-04-2016 IPR003399 Mce/MlaD APA12_RS12465 ed1a311e04325faf40138e82fa616b67 569 Pfam PF02470 MlaD protein 53 144 4.4E-10 T 19-04-2016 IPR003399 Mce/MlaD APA12_RS12465 ed1a311e04325faf40138e82fa616b67 569 PANTHER PTHR30462:SF0 8 342 3.0E-78 T 19-04-2016 APA12_RS12465 ed1a311e04325faf40138e82fa616b67 569 PANTHER PTHR30462 8 342 3.0E-78 T 19-04-2016 APA12_RS09845 ec3f71bda4bcb3b4f4500531d1359992 257 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 18 87 1.4E-12 T 19-04-2016 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 APA12_RS09845 ec3f71bda4bcb3b4f4500531d1359992 257 PIRSF PIRSF037208 1 248 1.0E-83 T 19-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic APA12_RS09845 ec3f71bda4bcb3b4f4500531d1359992 257 PANTHER PTHR21367:SF0 18 241 5.5E-59 T 19-04-2016 APA12_RS09845 ec3f71bda4bcb3b4f4500531d1359992 257 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 1 238 42.685 T 19-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic APA12_RS09845 ec3f71bda4bcb3b4f4500531d1359992 257 PANTHER PTHR21367 18 241 5.5E-59 T 19-04-2016 IPR030700 Arginine-tRNA-protein transferase APA12_RS09845 ec3f71bda4bcb3b4f4500531d1359992 257 SUPERFAMILY SSF55729 81 238 1.32E-22 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase APA12_RS09845 ec3f71bda4bcb3b4f4500531d1359992 257 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 107 229 2.1E-34 T 19-04-2016 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 APA12_RS01660 8e1cb1c4f067767e5d68b12852218c7a 472 Pfam PF13403 Hint domain 128 266 3.7E-39 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS01660 8e1cb1c4f067767e5d68b12852218c7a 472 SUPERFAMILY SSF51294 128 263 3.92E-10 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS07140 d5c1ff9b4c106d440d537cfc708cee77 496 SUPERFAMILY SSF103473 28 456 3.01E-53 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS07140 d5c1ff9b4c106d440d537cfc708cee77 496 Pfam PF00083 Sugar (and other) transporter 66 454 8.5E-35 T 19-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 APA12_RS07140 d5c1ff9b4c106d440d537cfc708cee77 496 PANTHER PTHR24064 41 454 8.7E-39 T 19-04-2016 APA12_RS07140 d5c1ff9b4c106d440d537cfc708cee77 496 Gene3D G3DSA:1.20.1250.20 35 221 1.6E-20 T 19-04-2016 APA12_RS07140 d5c1ff9b4c106d440d537cfc708cee77 496 Gene3D G3DSA:1.20.1250.20 276 454 1.4E-10 T 19-04-2016 APA12_RS10615 6572fe4b58191ee48f216fccb0816542 275 PANTHER PTHR32552 47 268 7.7E-67 T 19-04-2016 APA12_RS10615 6572fe4b58191ee48f216fccb0816542 275 Pfam PF00665 Integrase core domain 118 230 2.1E-26 T 19-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APA12_RS10615 6572fe4b58191ee48f216fccb0816542 275 PANTHER PTHR32552:SF26 47 268 7.7E-67 T 19-04-2016 APA12_RS10615 6572fe4b58191ee48f216fccb0816542 275 Gene3D G3DSA:3.30.420.10 113 268 8.2E-48 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS10615 6572fe4b58191ee48f216fccb0816542 275 SUPERFAMILY SSF53098 113 269 2.4E-39 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS00045 597bc909be1970b78350a63ac8a6d203 234 SUPERFAMILY SSF88697 30 223 3.98E-46 T 19-04-2016 IPR015947 PUA-like domain APA12_RS00045 597bc909be1970b78350a63ac8a6d203 234 SMART SM00464 30 224 1.9E-11 T 19-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 APA12_RS00045 597bc909be1970b78350a63ac8a6d203 234 PANTHER PTHR10046 6 223 1.6E-21 T 19-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 APA12_RS00045 597bc909be1970b78350a63ac8a6d203 234 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 31 222 5.8E-27 T 19-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 APA12_RS10380 f2f935a1ae2c8c7e12049ab19461822d 156 Pfam PF00034 Cytochrome c 25 115 2.4E-12 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS10380 f2f935a1ae2c8c7e12049ab19461822d 156 SUPERFAMILY SSF46626 26 120 2.33E-23 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS10380 f2f935a1ae2c8c7e12049ab19461822d 156 Gene3D G3DSA:1.10.760.10 27 137 2.4E-26 T 19-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APA12_RS10895 629fbace283900798e8561e26167a660 248 SMART SM00563 85 194 4.8E-16 T 19-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APA12_RS10895 629fbace283900798e8561e26167a660 248 Pfam PF01553 Acyltransferase 79 191 1.8E-15 T 19-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APA12_RS10895 629fbace283900798e8561e26167a660 248 SUPERFAMILY SSF69593 8 195 5.89E-22 T 19-04-2016 APA12_RS10895 629fbace283900798e8561e26167a660 248 PANTHER PTHR10434 85 187 2.8E-18 T 19-04-2016 APA12_RS10895 629fbace283900798e8561e26167a660 248 Gene3D G3DSA:3.40.1130.10 76 192 4.8E-12 T 19-04-2016 APA12_RS11925 f524c5229ae6291131dbab1ded0358f0 344 TIGRFAM TIGR00802 nico: transition metal uptake transporter, Ni2+-Co2+ transporter (NiCoT) family 52 332 3.4E-115 T 19-04-2016 IPR004688 Transition metal uptake transporter nickel/cobalt GO:0015099|GO:0016021|GO:0035444|GO:0046872 APA12_RS11925 f524c5229ae6291131dbab1ded0358f0 344 Pfam PF03824 High-affinity nickel-transport protein 49 337 1.5E-81 T 19-04-2016 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 APA12_RS11925 f524c5229ae6291131dbab1ded0358f0 344 PANTHER PTHR31611 12 344 8.1E-97 T 19-04-2016 APA12_RS11155 b118856cb052000cb666c2aed1c4817b 411 SUPERFAMILY SSF75304 11 403 6.15E-98 T 19-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APA12_RS11155 b118856cb052000cb666c2aed1c4817b 411 Gene3D G3DSA:3.90.1300.10 9 404 3.1E-101 T 19-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APA12_RS11155 b118856cb052000cb666c2aed1c4817b 411 Pfam PF01425 Amidase 12 393 9.1E-70 T 19-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APA12_RS11155 b118856cb052000cb666c2aed1c4817b 411 PANTHER PTHR11895 7 410 1.3E-88 T 19-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APA12_RS07115 2aa5b9a2c7f009a796c799ee374b789f 434 Pfam PF13347 MFS/sugar transport protein 14 422 6.1E-64 T 19-04-2016 APA12_RS07115 2aa5b9a2c7f009a796c799ee374b789f 434 SUPERFAMILY SSF103473 13 421 6.67E-32 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS07115 2aa5b9a2c7f009a796c799ee374b789f 434 PANTHER PTHR11328 7 428 1.2E-55 T 19-04-2016 APA12_RS07115 2aa5b9a2c7f009a796c799ee374b789f 434 Gene3D G3DSA:1.20.1250.20 230 415 4.8E-8 T 19-04-2016 APA12_RS07115 2aa5b9a2c7f009a796c799ee374b789f 434 Gene3D G3DSA:1.20.1250.20 21 205 1.5E-7 T 19-04-2016 APA12_RS03815 76c456c58fb7abe0b95d395fc48638c5 227 PANTHER PTHR33627:SF1 1 190 1.4E-14 T 19-04-2016 APA12_RS03815 76c456c58fb7abe0b95d395fc48638c5 227 Pfam PF01609 Transposase DDE domain 15 189 2.5E-11 T 19-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 APA12_RS03815 76c456c58fb7abe0b95d395fc48638c5 227 SUPERFAMILY SSF53098 4 215 5.31E-18 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS03815 76c456c58fb7abe0b95d395fc48638c5 227 PANTHER PTHR33627 1 190 1.4E-14 T 19-04-2016 APA12_RS08910 be692b3ebe29aea06c02196446167a6a 101 Pfam PF04800 ETC complex I subunit conserved region 3 95 3.0E-29 T 19-04-2016 IPR006885 NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial GO:0016651|GO:0022900 APA12_RS08910 be692b3ebe29aea06c02196446167a6a 101 PANTHER PTHR12219:SF18 3 99 1.5E-21 T 19-04-2016 APA12_RS08910 be692b3ebe29aea06c02196446167a6a 101 PANTHER PTHR12219 3 99 1.5E-21 T 19-04-2016 IPR006885 NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial GO:0016651|GO:0022900 APA12_RS08910 be692b3ebe29aea06c02196446167a6a 101 Gene3D G3DSA:3.30.160.190 1 78 1.4E-26 T 19-04-2016 APA12_RS12115 372ef372398e681abe70fcf4f24aa35b 389 Pfam PF03743 Bacterial conjugation TrbI-like protein 202 378 2.6E-55 T 19-04-2016 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI APA12_RS10480 56773e2725e26c348741d9615a213148 147 Pfam PF02472 Biopolymer transport protein ExbD/TolR 15 139 4.3E-22 T 19-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 APA12_RS10480 56773e2725e26c348741d9615a213148 147 PANTHER PTHR30558 12 147 2.7E-21 T 19-04-2016 APA12_RS01625 2df52398baaca147e2db24a8bf9c20b3 288 SUPERFAMILY SSF53448 7 199 1.66E-10 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS01625 2df52398baaca147e2db24a8bf9c20b3 288 Gene3D G3DSA:3.90.550.10 90 122 1.4E-4 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS02765 25c19d97634d63c8e20d00940557d635 181 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 83 136 6.0E-5 T 19-04-2016 IPR024572 Nickel/cobalt homeostasis protein RcnB APA12_RS02765 25c19d97634d63c8e20d00940557d635 181 Pfam PF11776 Nickel/cobalt transporter regulator 95 137 2.0E-10 T 19-04-2016 IPR024572 Nickel/cobalt homeostasis protein RcnB APA12_RS11560 b76af63e7d1f27372e615029af92b2af 101 Gene3D G3DSA:1.10.10.10 37 90 9.1E-5 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS11560 b76af63e7d1f27372e615029af92b2af 101 SUPERFAMILY SSF46955 35 91 3.84E-6 T 19-04-2016 IPR009061 Putative DNA-binding domain APA12_RS02215 0ab778a3bf3024642bfbce74a64c71a9 146 PANTHER PTHR35519 24 134 1.1E-29 T 19-04-2016 APA12_RS02215 0ab778a3bf3024642bfbce74a64c71a9 146 Pfam PF13430 Domain of unknown function (DUF4112) 32 134 1.4E-33 T 19-04-2016 IPR025187 Protein of unknown function DUF4112 APA12_RS00360 adac74afa63e0da580fb73c2bbea3038 409 SUPERFAMILY SSF48452 65 172 1.19E-6 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS00360 adac74afa63e0da580fb73c2bbea3038 409 Gene3D G3DSA:1.25.40.10 111 172 3.3E-6 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS00360 adac74afa63e0da580fb73c2bbea3038 409 Gene3D G3DSA:1.25.40.10 320 383 3.3E-6 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS00360 adac74afa63e0da580fb73c2bbea3038 409 Pfam PF13432 Tetratricopeptide repeat 117 167 7.3E-5 T 19-04-2016 APA12_RS10805 a9384dbd83d528254152add8db6af172 91 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 27 87 2.0E-11 T 19-04-2016 IPR008792 Coenzyme PQQ synthesis D UniPathway: UPA00539 APA12_RS10805 a9384dbd83d528254152add8db6af172 91 TIGRFAM TIGR03859 PQQ_PqqD: coenzyme PQQ biosynthesis protein PqqD 9 88 1.3E-22 T 19-04-2016 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 UniPathway: UPA00539 APA12_RS05625 4040de83f5c47a54543496a6ea07de02 190 Gene3D G3DSA:2.50.20.10 39 187 7.5E-7 T 19-04-2016 APA12_RS05625 4040de83f5c47a54543496a6ea07de02 190 SUPERFAMILY SSF89392 39 187 5.1E-10 T 19-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX APA12_RS05625 4040de83f5c47a54543496a6ea07de02 190 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 54 187 4.5E-8 T 19-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like APA12_RS05255 67c56c47d7159d4bccfcaf5adb9f8572 245 Gene3D G3DSA:3.90.79.10 96 235 1.3E-5 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APA12_RS05255 67c56c47d7159d4bccfcaf5adb9f8572 245 SUPERFAMILY SSF55811 88 225 2.27E-6 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APA12_RS11370 f8d14c150a4a08d1e20402edbeb67bb6 398 PANTHER PTHR23501:SF4 14 378 1.4E-55 T 19-04-2016 APA12_RS11370 f8d14c150a4a08d1e20402edbeb67bb6 398 Gene3D G3DSA:1.20.1250.20 209 381 7.7E-8 T 19-04-2016 APA12_RS11370 f8d14c150a4a08d1e20402edbeb67bb6 398 Pfam PF07690 Major Facilitator Superfamily 17 348 1.5E-29 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APA12_RS11370 f8d14c150a4a08d1e20402edbeb67bb6 398 PANTHER PTHR23501 14 378 1.4E-55 T 19-04-2016 APA12_RS11370 f8d14c150a4a08d1e20402edbeb67bb6 398 Gene3D G3DSA:1.20.1250.20 15 190 8.2E-26 T 19-04-2016 APA12_RS11370 f8d14c150a4a08d1e20402edbeb67bb6 398 SUPERFAMILY SSF103473 9 382 3.53E-47 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS12100 01863459c16e54b752f2f99c069a7209 718 Gene3D G3DSA:3.40.50.200 278 614 2.2E-22 T 19-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APA12_RS12100 01863459c16e54b752f2f99c069a7209 718 SUPERFAMILY SSF52743 201 677 2.75E-38 T 19-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APA12_RS12100 01863459c16e54b752f2f99c069a7209 718 Pfam PF00082 Subtilase family 277 610 1.4E-39 T 19-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APA12_RS06945 7e4f404ab79488c6876f397cf27e14b5 451 Pfam PF07690 Major Facilitator Superfamily 48 409 3.0E-47 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APA12_RS06945 7e4f404ab79488c6876f397cf27e14b5 451 Gene3D G3DSA:1.20.1250.20 270 443 6.2E-13 T 19-04-2016 APA12_RS06945 7e4f404ab79488c6876f397cf27e14b5 451 Gene3D G3DSA:1.20.1250.20 38 237 2.7E-47 T 19-04-2016 APA12_RS06945 7e4f404ab79488c6876f397cf27e14b5 451 SUPERFAMILY SSF103473 28 445 7.98E-75 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS06945 7e4f404ab79488c6876f397cf27e14b5 451 PANTHER PTHR11662 12 445 1.4E-105 T 19-04-2016 APA12_RS06945 7e4f404ab79488c6876f397cf27e14b5 451 PANTHER PTHR11662:SF3 12 445 1.4E-105 T 19-04-2016 APA12_RS10685 983fbbc3de4d6485be64c548aab16af0 139 Pfam PF00293 NUDIX domain 14 113 9.5E-8 T 19-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APA12_RS10685 983fbbc3de4d6485be64c548aab16af0 139 PANTHER PTHR22769:SF5 8 128 2.2E-25 T 19-04-2016 APA12_RS10685 983fbbc3de4d6485be64c548aab16af0 139 SUPERFAMILY SSF55811 4 130 1.26E-19 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APA12_RS10685 983fbbc3de4d6485be64c548aab16af0 139 PANTHER PTHR22769 8 128 2.2E-25 T 19-04-2016 APA12_RS10685 983fbbc3de4d6485be64c548aab16af0 139 Gene3D G3DSA:3.90.79.10 3 134 5.2E-17 T 19-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APA12_RS11425 bfe2e7753c9fa3ee7594636308bb6268 1154 PANTHER PTHR23304 142 1145 1.3E-213 T 19-04-2016 APA12_RS11425 bfe2e7753c9fa3ee7594636308bb6268 1154 PANTHER PTHR23304 1 126 1.3E-213 T 19-04-2016 APA12_RS11425 bfe2e7753c9fa3ee7594636308bb6268 1154 PANTHER PTHR23304:SF96 142 1145 1.3E-213 T 19-04-2016 APA12_RS11425 bfe2e7753c9fa3ee7594636308bb6268 1154 PANTHER PTHR23304:SF96 1 126 1.3E-213 T 19-04-2016 APA12_RS11425 bfe2e7753c9fa3ee7594636308bb6268 1154 Pfam PF02514 CobN/Magnesium Chelatase 162 1141 5.4E-270 T 19-04-2016 IPR003672 CobN/magnesium chelatase GO:0009058 APA12_RS01885 d04427500be7867c88e5d10d94c868ba 239 Gene3D G3DSA:3.40.50.620 39 223 1.0E-40 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS01885 d04427500be7867c88e5d10d94c868ba 239 Pfam PF01467 Cytidylyltransferase-like 42 222 6.0E-18 T 19-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APA12_RS01885 d04427500be7867c88e5d10d94c868ba 239 PANTHER PTHR39321 35 188 3.5E-32 T 19-04-2016 APA12_RS01885 d04427500be7867c88e5d10d94c868ba 239 PANTHER PTHR39321 204 223 3.5E-32 T 19-04-2016 APA12_RS01885 d04427500be7867c88e5d10d94c868ba 239 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 38 222 20.1 T 19-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 APA12_RS01885 d04427500be7867c88e5d10d94c868ba 239 SUPERFAMILY SSF52374 38 222 1.09E-36 T 19-04-2016 APA12_RS02350 39a8fb9194231543eaaa4b1be6a6feb4 360 Pfam PF04577 Protein of unknown function (DUF563) 120 317 4.7E-44 T 19-04-2016 IPR007657 Glycosyltransferase AER61, uncharacterised GO:0016757 APA12_RS02350 39a8fb9194231543eaaa4b1be6a6feb4 360 PANTHER PTHR20961 217 315 8.0E-14 T 19-04-2016 APA12_RS01260 ad36737bbfafcfd90f5b50b9ab6a6d9a 252 PANTHER PTHR12366 37 210 5.3E-53 T 19-04-2016 APA12_RS01260 ad36737bbfafcfd90f5b50b9ab6a6d9a 252 Gene3D G3DSA:2.60.120.330 110 209 3.5E-12 T 19-04-2016 IPR027443 Isopenicillin N synthase-like APA12_RS01260 ad36737bbfafcfd90f5b50b9ab6a6d9a 252 SUPERFAMILY SSF51197 81 218 1.04E-14 T 19-04-2016 APA12_RS01260 ad36737bbfafcfd90f5b50b9ab6a6d9a 252 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 55 210 1.7E-46 T 19-04-2016 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 APA12_RS11940 5594a3aca30888c007d9d3801159b3e1 654 SUPERFAMILY SSF53474 342 620 3.08E-16 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS11940 5594a3aca30888c007d9d3801159b3e1 654 Gene3D G3DSA:3.40.50.1820 550 616 1.8E-21 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS11940 5594a3aca30888c007d9d3801159b3e1 654 Gene3D G3DSA:3.40.50.1820 342 439 1.8E-21 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS11940 5594a3aca30888c007d9d3801159b3e1 654 Gene3D G3DSA:3.40.50.1820 474 493 1.8E-21 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS09915 e76924805f7cbbf69f1ed9cdf15cfe84 344 Pfam PF09084 NMT1/THI5 like 62 270 6.9E-10 T 19-04-2016 IPR015168 SsuA/THI5-like APA12_RS09915 e76924805f7cbbf69f1ed9cdf15cfe84 344 PANTHER PTHR30024:SF1 47 331 1.9E-17 T 19-04-2016 APA12_RS09915 e76924805f7cbbf69f1ed9cdf15cfe84 344 SUPERFAMILY SSF53850 48 274 2.28E-21 T 19-04-2016 APA12_RS09915 e76924805f7cbbf69f1ed9cdf15cfe84 344 PANTHER PTHR30024 47 331 1.9E-17 T 19-04-2016 APA12_RS09915 e76924805f7cbbf69f1ed9cdf15cfe84 344 Gene3D G3DSA:3.40.190.10 130 213 4.7E-9 T 19-04-2016 APA12_RS05615 51b52f71db6d675fb7943d7c65d8041b 205 SMART SM00271 139 197 2.6E-10 T 19-04-2016 IPR001623 DnaJ domain APA12_RS05615 51b52f71db6d675fb7943d7c65d8041b 205 Gene3D G3DSA:1.10.287.110 140 192 9.7E-14 T 19-04-2016 IPR001623 DnaJ domain APA12_RS05615 51b52f71db6d675fb7943d7c65d8041b 205 SUPERFAMILY SSF46565 118 192 6.8E-14 T 19-04-2016 IPR001623 DnaJ domain APA12_RS05615 51b52f71db6d675fb7943d7c65d8041b 205 PRINTS PR00625 DnaJ domain signature 142 160 4.4E-7 T 19-04-2016 IPR001623 DnaJ domain APA12_RS05615 51b52f71db6d675fb7943d7c65d8041b 205 PRINTS PR00625 DnaJ domain signature 177 197 4.4E-7 T 19-04-2016 IPR001623 DnaJ domain APA12_RS05615 51b52f71db6d675fb7943d7c65d8041b 205 PRINTS PR00625 DnaJ domain signature 160 175 4.4E-7 T 19-04-2016 IPR001623 DnaJ domain APA12_RS05615 51b52f71db6d675fb7943d7c65d8041b 205 Pfam PF00226 DnaJ domain 143 193 2.8E-11 T 19-04-2016 IPR001623 DnaJ domain APA12_RS01690 24980a96ad5045237822542df71d364b 308 Pfam PF05013 N-formylglutamate amidohydrolase 46 273 1.5E-66 T 19-04-2016 IPR007709 N-formylglutamate amidohydrolase APA12_RS01690 24980a96ad5045237822542df71d364b 308 Gene3D G3DSA:3.40.630.40 37 301 1.8E-90 T 19-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APA12_RS01690 24980a96ad5045237822542df71d364b 308 SUPERFAMILY SSF53187 37 300 3.77E-80 T 19-04-2016 APA12_RS06605 7700d60b10f77a69ac3a5a8d03d168c1 365 PANTHER PTHR30106:SF2 19 344 3.1E-64 T 19-04-2016 APA12_RS06605 7700d60b10f77a69ac3a5a8d03d168c1 365 PANTHER PTHR30106 19 344 3.1E-64 T 19-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 APA12_RS06605 7700d60b10f77a69ac3a5a8d03d168c1 365 Pfam PF03601 Conserved hypothetical protein 698 39 343 1.1E-61 T 19-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 APA12_RS10920 f3400d3f3f6ffb5984844dcd5473929e 477 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 11 441 2.1E-154 T 19-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 APA12_RS10920 f3400d3f3f6ffb5984844dcd5473929e 477 PANTHER PTHR30365:SF8 1 463 3.6E-235 T 19-04-2016 APA12_RS10920 f3400d3f3f6ffb5984844dcd5473929e 477 PIRSF PIRSF006446 5 468 8.0E-188 T 19-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 APA12_RS10920 f3400d3f3f6ffb5984844dcd5473929e 477 PANTHER PTHR30365 1 463 3.6E-235 T 19-04-2016 APA12_RS13290 596a56b5becad9c2d03db3162f8f411e 239 PANTHER PTHR30625 5 238 8.4E-54 T 19-04-2016 APA12_RS13290 596a56b5becad9c2d03db3162f8f411e 239 PANTHER PTHR30625:SF3 5 238 8.4E-54 T 19-04-2016 APA12_RS13290 596a56b5becad9c2d03db3162f8f411e 239 Pfam PF01618 MotA/TolQ/ExbB proton channel family 89 221 4.7E-36 T 19-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 APA12_RS13290 596a56b5becad9c2d03db3162f8f411e 239 TIGRFAM TIGR02796 tolQ: protein TolQ 19 233 6.0E-80 T 19-04-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 APA12_RS04260 9b9a761a7008d967180688f55bb1fdac 211 Gene3D G3DSA:1.10.260.40 16 65 2.9E-8 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APA12_RS04260 9b9a761a7008d967180688f55bb1fdac 211 SUPERFAMILY SSF47413 14 65 5.09E-8 T 19-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APA12_RS04260 9b9a761a7008d967180688f55bb1fdac 211 Pfam PF01381 Helix-turn-helix 17 60 8.6E-7 T 19-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APA12_RS10845 1cfeb6aa447c856e4048cc7f848d323c 610 Pfam PF01368 DHH family 114 210 4.6E-8 T 19-04-2016 IPR001667 DDH domain APA12_RS10845 1cfeb6aa447c856e4048cc7f848d323c 610 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 57 606 2.1E-152 T 19-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 APA12_RS10845 1cfeb6aa447c856e4048cc7f848d323c 610 Pfam PF02272 DHHA1 domain 413 477 2.8E-11 T 19-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 APA12_RS10845 1cfeb6aa447c856e4048cc7f848d323c 610 PANTHER PTHR30255:SF2 26 610 2.8E-168 T 19-04-2016 APA12_RS10845 1cfeb6aa447c856e4048cc7f848d323c 610 SUPERFAMILY SSF64182 86 484 3.79E-107 T 19-04-2016 APA12_RS10845 1cfeb6aa447c856e4048cc7f848d323c 610 PANTHER PTHR30255 26 610 2.8E-168 T 19-04-2016 APA12_RS11240 790e963d581f183e8112af51d13f588f 126 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 2 115 1.5E-15 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS11240 790e963d581f183e8112af51d13f588f 126 Gene3D G3DSA:1.10.3720.10 3 120 9.1E-27 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS11240 790e963d581f183e8112af51d13f588f 126 SUPERFAMILY SSF161098 2 120 3.14E-29 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS11240 790e963d581f183e8112af51d13f588f 126 PANTHER PTHR30193:SF5 1 119 3.2E-33 T 19-04-2016 APA12_RS11240 790e963d581f183e8112af51d13f588f 126 PANTHER PTHR30193 1 119 3.2E-33 T 19-04-2016 APA12_RS07315 e10db67e5eb95486b8fba36820e8b6fd 451 SUPERFAMILY SSF103473 11 413 4.05E-50 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS07315 e10db67e5eb95486b8fba36820e8b6fd 451 Pfam PF07690 Major Facilitator Superfamily 42 276 9.1E-19 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APA12_RS07315 e10db67e5eb95486b8fba36820e8b6fd 451 Gene3D G3DSA:1.20.1250.20 231 430 3.9E-20 T 19-04-2016 APA12_RS07315 e10db67e5eb95486b8fba36820e8b6fd 451 Gene3D G3DSA:1.20.1250.20 24 207 4.7E-20 T 19-04-2016 APA12_RS11620 3f8354015f7c6cdce0788240bbaca175 320 Pfam PF13391 HNH endonuclease 216 268 2.2E-11 T 19-04-2016 IPR003615 HNH nuclease APA12_RS06910 376a9877e5c6710aeb5f312026e8d4d4 431 PIRSF PIRSF029171 9 419 3.6E-98 T 19-04-2016 IPR005152 Lipase, secreted GO:0004806|GO:0016042 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 APA12_RS06910 376a9877e5c6710aeb5f312026e8d4d4 431 Gene3D G3DSA:3.40.50.1820 304 406 2.7E-18 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS06910 376a9877e5c6710aeb5f312026e8d4d4 431 Gene3D G3DSA:3.40.50.1820 105 225 2.7E-18 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS06910 376a9877e5c6710aeb5f312026e8d4d4 431 Pfam PF03583 Secretory lipase 155 242 5.7E-10 T 19-04-2016 IPR005152 Lipase, secreted GO:0004806|GO:0016042 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 APA12_RS06910 376a9877e5c6710aeb5f312026e8d4d4 431 SUPERFAMILY SSF53474 104 260 4.27E-22 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS06910 376a9877e5c6710aeb5f312026e8d4d4 431 SUPERFAMILY SSF53474 321 396 4.27E-22 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS12810 359086b1126a98e92f69113b99bc5a90 273 Pfam PF03239 Iron permease FTR1 family 1 258 2.2E-31 T 19-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 APA12_RS12810 359086b1126a98e92f69113b99bc5a90 273 PANTHER PTHR31632 1 260 3.0E-21 T 19-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 APA12_RS06555 973147bf90ea12f8f112103413582ffd 146 Pfam PF02472 Biopolymer transport protein ExbD/TolR 15 139 4.2E-22 T 19-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 APA12_RS06555 973147bf90ea12f8f112103413582ffd 146 PANTHER PTHR30558 12 146 1.6E-20 T 19-04-2016 APA12_RS00355 973147bf90ea12f8f112103413582ffd 146 Pfam PF02472 Biopolymer transport protein ExbD/TolR 15 139 4.2E-22 T 19-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 APA12_RS00355 973147bf90ea12f8f112103413582ffd 146 PANTHER PTHR30558 12 146 1.6E-20 T 19-04-2016 APA12_RS03905 a64f049835bcd8f989149305693e57e5 257 Pfam PF08241 Methyltransferase domain 82 129 1.2E-5 T 19-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 APA12_RS03905 a64f049835bcd8f989149305693e57e5 257 SUPERFAMILY SSF53335 83 188 4.35E-15 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS03905 a64f049835bcd8f989149305693e57e5 257 Gene3D G3DSA:3.40.50.150 85 210 2.6E-11 T 19-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APA12_RS02955 bfab98327221d8ec91f8069bf1336a46 411 Pfam PF04966 Carbohydrate-selective porin, OprB family 38 408 1.9E-71 T 19-04-2016 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 APA12_RS02955 bfab98327221d8ec91f8069bf1336a46 411 PANTHER PTHR37944 1 411 4.2E-41 T 19-04-2016 APA12_RS11350 d8a140a928e758fcf34ccd1a2a4d154c 224 Pfam PF12318 Membrane bound FAD containing D-sorbitol dehydrogenase 45 202 3.2E-49 T 19-04-2016 IPR024651 FAD-containing D-sorbitol dehydrogenase small subunit APA12_RS03045 e4480e94a1910e6232edb0d8b498aead 464 Gene3D G3DSA:1.10.3080.10 17 431 7.6E-74 T 19-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 APA12_RS03045 e4480e94a1910e6232edb0d8b498aead 464 PRINTS PR00762 Chloride channel signature 388 407 3.0E-26 T 19-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APA12_RS03045 e4480e94a1910e6232edb0d8b498aead 464 PRINTS PR00762 Chloride channel signature 370 386 3.0E-26 T 19-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APA12_RS03045 e4480e94a1910e6232edb0d8b498aead 464 PRINTS PR00762 Chloride channel signature 174 193 3.0E-26 T 19-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APA12_RS03045 e4480e94a1910e6232edb0d8b498aead 464 PRINTS PR00762 Chloride channel signature 341 361 3.0E-26 T 19-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APA12_RS03045 e4480e94a1910e6232edb0d8b498aead 464 PRINTS PR00762 Chloride channel signature 122 141 3.0E-26 T 19-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APA12_RS03045 e4480e94a1910e6232edb0d8b498aead 464 PRINTS PR00762 Chloride channel signature 88 105 3.0E-26 T 19-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APA12_RS03045 e4480e94a1910e6232edb0d8b498aead 464 Pfam PF00654 Voltage gated chloride channel 75 420 6.2E-79 T 19-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APA12_RS03045 e4480e94a1910e6232edb0d8b498aead 464 PANTHER PTHR11689 55 398 4.1E-48 T 19-04-2016 APA12_RS03045 e4480e94a1910e6232edb0d8b498aead 464 PANTHER PTHR11689 25 33 4.1E-48 T 19-04-2016 APA12_RS03045 e4480e94a1910e6232edb0d8b498aead 464 SUPERFAMILY SSF81340 16 436 8.5E-91 T 19-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 APA12_RS07215 bf766c4b1bf15e692e8eae069c446582 514 PANTHER PTHR30195:SF15 2 421 3.9E-51 T 19-04-2016 APA12_RS07215 bf766c4b1bf15e692e8eae069c446582 514 PANTHER PTHR30195 2 421 3.9E-51 T 19-04-2016 APA12_RS02570 398ba173786e74b1fc63b3f6c68ef80a 586 SUPERFAMILY SSF51294 240 377 1.75E-12 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS02570 398ba173786e74b1fc63b3f6c68ef80a 586 Gene3D G3DSA:2.170.16.10 239 378 1.0E-5 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS02570 398ba173786e74b1fc63b3f6c68ef80a 586 Pfam PF13403 Hint domain 239 379 1.2E-41 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS00680 0a027432424f22ef15efdf541a6bf6bb 290 Gene3D G3DSA:2.40.160.10 2 290 1.4E-64 T 19-04-2016 IPR023614 Porin domain APA12_RS00680 0a027432424f22ef15efdf541a6bf6bb 290 Pfam PF07396 Phosphate-selective porin O and P 2 290 5.3E-24 T 19-04-2016 IPR010870 Phosphate-selective porin O/P APA12_RS06695 36d0a833442a3fb4852f2df5fd1ab454 146 Pfam PF11162 Protein of unknown function (DUF2946) 8 139 8.0E-9 T 19-04-2016 IPR021333 Protein of unknown function DUF2946 APA12_RS05955 ce153062e11dc44e7774f56b8ee0ba53 249 Gene3D G3DSA:3.40.190.10 4 64 3.4E-4 T 19-04-2016 APA12_RS05955 ce153062e11dc44e7774f56b8ee0ba53 249 SUPERFAMILY SSF53850 4 241 1.43E-23 T 19-04-2016 APA12_RS05955 ce153062e11dc44e7774f56b8ee0ba53 249 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 3 241 6.5E-24 T 19-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 APA12_RS05955 ce153062e11dc44e7774f56b8ee0ba53 249 Gene3D G3DSA:3.40.190.100 114 201 3.4E-6 T 19-04-2016 APA12_RS00960 9f20998c4bdb36178d93915eaee09817 303 Gene3D G3DSA:2.40.50.100 46 79 5.2E-17 T 19-04-2016 APA12_RS00960 9f20998c4bdb36178d93915eaee09817 303 Gene3D G3DSA:2.40.50.100 152 185 5.2E-17 T 19-04-2016 APA12_RS00960 9f20998c4bdb36178d93915eaee09817 303 SUPERFAMILY SSF111369 44 199 2.88E-20 T 19-04-2016 APA12_RS00960 9f20998c4bdb36178d93915eaee09817 303 PANTHER PTHR30367:SF5 8 290 1.4E-111 T 19-04-2016 APA12_RS00960 9f20998c4bdb36178d93915eaee09817 303 Pfam PF13533 Biotin-lipoyl like 46 93 1.6E-15 T 19-04-2016 APA12_RS00960 9f20998c4bdb36178d93915eaee09817 303 PANTHER PTHR30367 8 290 1.4E-111 T 19-04-2016 APA12_RS00960 9f20998c4bdb36178d93915eaee09817 303 Pfam PF13437 HlyD family secretion protein 154 237 3.0E-9 T 19-04-2016 APA12_RS07240 c99ecdf6edbbc420c2ab3d10efcfcc9b 304 PANTHER PTHR33678:SF1 17 303 3.5E-55 T 19-04-2016 APA12_RS07240 c99ecdf6edbbc420c2ab3d10efcfcc9b 304 Pfam PF03050 Transposase IS66 family 184 303 5.6E-33 T 19-04-2016 IPR004291 Transposase, IS66 APA12_RS07240 c99ecdf6edbbc420c2ab3d10efcfcc9b 304 Pfam PF13005 zinc-finger binding domain of transposase IS66 124 169 9.2E-17 T 19-04-2016 IPR024474 Zinc-finger binding domain of transposase IS66 APA12_RS07240 c99ecdf6edbbc420c2ab3d10efcfcc9b 304 Pfam PF13007 Transposase C of IS166 homeodomain 45 119 3.7E-17 T 19-04-2016 IPR024463 Transposase TnpC, homeodomain APA12_RS07240 c99ecdf6edbbc420c2ab3d10efcfcc9b 304 PANTHER PTHR33678 17 303 3.5E-55 T 19-04-2016 APA12_RS08570 238193913b2e60025b55178a7a0d51aa 154 Pfam PF05443 ROS/MUCR transcriptional regulator protein 10 129 1.6E-49 T 19-04-2016 IPR008807 ROSMUCR transcriptional regulator GO:0003677|GO:0006355|GO:0008270 APA12_RS10485 c68397bab4a9d07de8e8599a0582afa9 139 PANTHER PTHR30558:SF3 18 139 2.9E-22 T 19-04-2016 APA12_RS10485 c68397bab4a9d07de8e8599a0582afa9 139 PANTHER PTHR30558 18 139 2.9E-22 T 19-04-2016 APA12_RS10485 c68397bab4a9d07de8e8599a0582afa9 139 Pfam PF02472 Biopolymer transport protein ExbD/TolR 16 137 1.5E-25 T 19-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 APA12_RS07645 627111ed6532953746cd3cbb294bece9 326 Gene3D G3DSA:3.40.50.300 9 260 3.9E-81 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS07645 627111ed6532953746cd3cbb294bece9 326 PANTHER PTHR24220 12 324 2.9E-148 T 19-04-2016 APA12_RS07645 627111ed6532953746cd3cbb294bece9 326 SUPERFAMILY SSF52540 10 258 4.77E-73 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS07645 627111ed6532953746cd3cbb294bece9 326 SMART SM00382 40 237 1.2E-14 T 19-04-2016 IPR003593 AAA+ ATPase domain APA12_RS07645 627111ed6532953746cd3cbb294bece9 326 Pfam PF00005 ABC transporter 32 187 1.4E-30 T 19-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APA12_RS07645 627111ed6532953746cd3cbb294bece9 326 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 19-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APA12_RS07645 627111ed6532953746cd3cbb294bece9 326 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 239 303 3.2E-17 T 19-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APA12_RS07645 627111ed6532953746cd3cbb294bece9 326 PANTHER PTHR24220:SF336 12 324 2.9E-148 T 19-04-2016 APA12_RS07645 627111ed6532953746cd3cbb294bece9 326 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 324 2.8E-27 T 19-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APA12_RS00510 ac2831bab8f990e6ff7ec052c22a126c 365 PANTHER PTHR22926 47 349 6.7E-45 T 19-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APA12_RS00510 ac2831bab8f990e6ff7ec052c22a126c 365 Pfam PF00953 Glycosyl transferase family 4 105 247 5.8E-27 T 19-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APA12_RS00510 ac2831bab8f990e6ff7ec052c22a126c 365 PANTHER PTHR22926:SF3 47 349 6.7E-45 T 19-04-2016 APA12_RS03730 a9c5b7f4b9f16b14bf820b3187aa131b 176 Pfam PF11233 Protein of unknown function (DUF3035) 20 161 1.6E-38 T 19-04-2016 IPR021395 Protein of unknown function DUF3035 APA12_RS01185 a0b4ac402c0a2cf52e84422f1dab125f 171 Pfam PF02600 Disulfide bond formation protein DsbB 8 157 8.6E-24 T 19-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 APA12_RS01185 a0b4ac402c0a2cf52e84422f1dab125f 171 Gene3D G3DSA:1.20.1550.10 6 168 3.2E-24 T 19-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain APA12_RS01185 a0b4ac402c0a2cf52e84422f1dab125f 171 SUPERFAMILY SSF158442 12 157 6.02E-21 T 19-04-2016 APA12_RS09480 87abc72d8ca3bbe08d701e9141a4a7a9 77 Pfam PF13156 Restriction endonuclease 34 67 2.6E-6 T 19-04-2016 APA12_RS10115 e8f1c54602bdadc5777cd35b33bc1992 361 Pfam PF10150 Ribonuclease E/G family 163 282 7.7E-21 T 19-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 APA12_RS10115 e8f1c54602bdadc5777cd35b33bc1992 361 SUPERFAMILY SSF50249 39 99 1.64E-6 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS10115 e8f1c54602bdadc5777cd35b33bc1992 361 PANTHER PTHR30001 174 294 1.7E-18 T 19-04-2016 APA12_RS10115 e8f1c54602bdadc5777cd35b33bc1992 361 Gene3D G3DSA:2.40.50.140 36 98 3.0E-6 T 19-04-2016 IPR012340 Nucleic acid-binding, OB-fold APA12_RS12210 36a12798b44b6c5bdeb007c3949e2851 176 Pfam PF10134 Replication initiator protein A 29 176 9.3E-55 T 19-04-2016 IPR018777 Replication initiator protein A APA12_RS03445 ff2f3ef404756d33955927476784e376 245 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 113 221 1.8E-5 T 19-04-2016 IPR010664 Lipopolysaccharide assembly, LptC-related APA12_RS08695 332df29bd72c2e75c4e93bcfc78ba019 117 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 80 24.629 T 19-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS08695 332df29bd72c2e75c4e93bcfc78ba019 117 ProSitePatterns PS00732 Ribosomal protein S16 signature. 3 12 - T 19-04-2016 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS08695 332df29bd72c2e75c4e93bcfc78ba019 117 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 82 2.3E-32 T 19-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS08695 332df29bd72c2e75c4e93bcfc78ba019 117 Gene3D G3DSA:3.30.1320.10 3 83 2.7E-34 T 19-04-2016 IPR023803 Ribosomal protein S16 domain APA12_RS08695 332df29bd72c2e75c4e93bcfc78ba019 117 Pfam PF00886 Ribosomal protein S16 9 70 1.9E-27 T 19-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS08695 332df29bd72c2e75c4e93bcfc78ba019 117 PANTHER PTHR12919 2 117 1.2E-45 T 19-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APA12_RS08695 332df29bd72c2e75c4e93bcfc78ba019 117 SUPERFAMILY SSF54565 3 95 6.67E-33 T 19-04-2016 IPR023803 Ribosomal protein S16 domain APA12_RS01895 05594b65057e9c393f366246c15c989d 151 SUPERFAMILY SSF75217 2 146 6.02E-43 T 19-04-2016 IPR029028 Alpha/beta knot methyltransferases APA12_RS01895 05594b65057e9c393f366246c15c989d 151 PANTHER PTHR33603 1 147 9.0E-48 T 19-04-2016 APA12_RS01895 05594b65057e9c393f366246c15c989d 151 Gene3D G3DSA:3.40.1280.10 1 147 1.2E-51 T 19-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APA12_RS01895 05594b65057e9c393f366246c15c989d 151 PIRSF PIRSF004505 1 147 1.2E-43 T 19-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APA12_RS01895 05594b65057e9c393f366246c15c989d 151 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 147 25.484 T 19-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APA12_RS01895 05594b65057e9c393f366246c15c989d 151 Pfam PF02590 Predicted SPOUT methyltransferase 2 146 7.6E-46 T 19-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APA12_RS01895 05594b65057e9c393f366246c15c989d 151 PANTHER PTHR33603:SF1 1 147 9.0E-48 T 19-04-2016 APA12_RS02625 34e3c4b467a9a17ca66c3dff6dcdb5d7 459 Pfam PF06381 Protein of unknown function (DUF1073) 108 454 3.3E-91 T 19-04-2016 IPR024459 Protein of unknown function DUF1073 APA12_RS03780 5a51a8023f0cfc1f882e3a86daeab972 113 Pfam PF07372 Protein of unknown function (DUF1491) 7 105 3.9E-29 T 19-04-2016 IPR009964 Protein of unknown function DUF1491 APA12_RS00635 3e68ce5947e53fd44c76411ddcf53806 169 PANTHER PTHR35024 30 163 7.6E-19 T 19-04-2016 APA12_RS00635 3e68ce5947e53fd44c76411ddcf53806 169 Pfam PF04519 Polymer-forming cytoskeletal 48 143 8.0E-19 T 19-04-2016 IPR007607 Protein of unknown function DUF583 APA12_RS00635 3e68ce5947e53fd44c76411ddcf53806 169 PANTHER PTHR35024:SF2 30 163 7.6E-19 T 19-04-2016 APA12_RS02260 39d641b45380f12856e2edbeab9f4196 77 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 50 2.9E-7 T 19-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain APA12_RS06950 af1f27abcf0d08e38902e3251fcedef0 478 Pfam PF13372 Alginate export 63 469 1.3E-25 T 19-04-2016 IPR025388 Alginate export domain UniPathway: UPA00286 APA12_RS10925 73d98695fdec3958b5189dd42c55b02b 343 Pfam PF04261 Dyp-type peroxidase family 5 301 4.6E-93 T 19-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- APA12_RS10925 73d98695fdec3958b5189dd42c55b02b 343 SUPERFAMILY SSF54909 4 304 3.93E-102 T 19-04-2016 IPR011008 Dimeric alpha-beta barrel APA12_RS10925 73d98695fdec3958b5189dd42c55b02b 343 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 6 300 1.3E-85 T 19-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- APA12_RS10925 73d98695fdec3958b5189dd42c55b02b 343 PANTHER PTHR30521:SF0 19 314 4.0E-110 T 19-04-2016 APA12_RS10925 73d98695fdec3958b5189dd42c55b02b 343 PANTHER PTHR30521 19 314 4.0E-110 T 19-04-2016 APA12_RS13555 e449446da04ba469a53d85865115e470 150 Pfam PF03653 Uncharacterised protein family (UPF0093) 11 150 2.4E-58 T 19-04-2016 IPR005265 Uncharacterised protein family UPF0093 APA12_RS13555 e449446da04ba469a53d85865115e470 150 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 11 150 4.9E-49 T 19-04-2016 IPR014351 Conserved hypothetical protein CHP00701 APA12_RS13555 e449446da04ba469a53d85865115e470 150 PANTHER PTHR40255 8 150 3.0E-47 T 19-04-2016 APA12_RS13555 e449446da04ba469a53d85865115e470 150 PIRSF PIRSF004638 4 150 1.5E-55 T 19-04-2016 IPR005265 Uncharacterised protein family UPF0093 APA12_RS02970 88c807b1d759da5218b0769de3410702 105 PANTHER PTHR30007 1 97 2.3E-38 T 19-04-2016 APA12_RS02970 88c807b1d759da5218b0769de3410702 105 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 79 5.0E-26 T 19-04-2016 IPR025161 Putative transposase IS4/IS5 family APA12_RS02970 88c807b1d759da5218b0769de3410702 105 PANTHER PTHR30007:SF21 1 97 2.3E-38 T 19-04-2016 APA12_RS05975 3759cd75dfc03226f683103739d9e629 353 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 48 351 6.0E-77 T 19-04-2016 IPR018707 Protein of unknown function DUF2219 APA12_RS05975 3759cd75dfc03226f683103739d9e629 353 Gene3D G3DSA:2.40.128.140 33 350 3.5E-86 T 19-04-2016 APA12_RS06360 da8898b09af7cdbb5e852fc8afa38b91 125 Pfam PF00691 OmpA family 27 98 2.4E-10 T 19-04-2016 IPR006665 OmpA-like domain APA12_RS06360 da8898b09af7cdbb5e852fc8afa38b91 125 Gene3D G3DSA:3.30.1330.60 26 122 5.5E-14 T 19-04-2016 IPR006665 OmpA-like domain APA12_RS06360 da8898b09af7cdbb5e852fc8afa38b91 125 SUPERFAMILY SSF103088 23 121 6.41E-16 T 19-04-2016 IPR006665 OmpA-like domain APA12_RS02905 92c72c82a24f9c98c1faded3d1d836ba 75 Pfam PF13586 Transposase DDE domain 4 74 2.4E-12 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS08200 92c72c82a24f9c98c1faded3d1d836ba 75 Pfam PF13586 Transposase DDE domain 4 74 2.4E-12 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS00640 6207c39576f6923126d68f7e77b2b957 202 Pfam PF07750 GcrA cell cycle regulator 1 89 4.8E-19 T 19-04-2016 IPR011681 GcrA cell cycle regulator APA12_RS00640 6207c39576f6923126d68f7e77b2b957 202 Pfam PF07750 GcrA cell cycle regulator 96 198 5.7E-14 T 19-04-2016 IPR011681 GcrA cell cycle regulator APA12_RS10395 fae046d90f65550de0c55624fa7f0e48 502 PANTHER PTHR11699 25 493 8.1E-202 T 19-04-2016 APA12_RS10395 fae046d90f65550de0c55624fa7f0e48 502 Gene3D G3DSA:3.40.309.10 280 457 3.8E-62 T 19-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APA12_RS10395 fae046d90f65550de0c55624fa7f0e48 502 Gene3D G3DSA:3.40.605.10 28 279 3.6E-83 T 19-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APA12_RS10395 fae046d90f65550de0c55624fa7f0e48 502 PANTHER PTHR11699:SF214 25 493 8.1E-202 T 19-04-2016 APA12_RS10395 fae046d90f65550de0c55624fa7f0e48 502 SUPERFAMILY SSF53720 26 492 2.09E-150 T 19-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APA12_RS10395 fae046d90f65550de0c55624fa7f0e48 502 Pfam PF00171 Aldehyde dehydrogenase family 35 492 3.4E-150 T 19-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APA12_RS02725 38cf32d60f320cfeb356e01a85ee7ab0 192 Pfam PF11041 Protein of unknown function (DUF2612) 5 188 3.9E-66 T 19-04-2016 IPR021283 Protein of unknown function DUF2612 APA12_RS10085 bb0648075cbf2536aed60a104b681a14 299 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 73 287 4.3E-42 T 19-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APA12_RS10085 bb0648075cbf2536aed60a104b681a14 299 SUPERFAMILY SSF53187 214 290 1.63E-47 T 19-04-2016 APA12_RS10085 bb0648075cbf2536aed60a104b681a14 299 SUPERFAMILY SSF53187 72 167 1.63E-47 T 19-04-2016 APA12_RS10085 bb0648075cbf2536aed60a104b681a14 299 PANTHER PTHR30404 71 292 5.7E-65 T 19-04-2016 APA12_RS10085 bb0648075cbf2536aed60a104b681a14 299 Gene3D G3DSA:3.40.630.40 215 290 3.0E-50 T 19-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APA12_RS10085 bb0648075cbf2536aed60a104b681a14 299 Gene3D G3DSA:3.40.630.40 72 168 3.0E-50 T 19-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APA12_RS10085 bb0648075cbf2536aed60a104b681a14 299 SMART SM00646 133 287 9.8E-29 T 19-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APA12_RS10085 bb0648075cbf2536aed60a104b681a14 299 PANTHER PTHR30404:SF0 71 292 5.7E-65 T 19-04-2016 APA12_RS11990 bd0a17f9b1af36a51e0acf4bb4022d49 563 SUPERFAMILY SSF52091 444 553 2.16E-13 T 19-04-2016 IPR002645 STAS domain APA12_RS11990 bd0a17f9b1af36a51e0acf4bb4022d49 563 Pfam PF01740 STAS domain 446 549 1.1E-15 T 19-04-2016 IPR002645 STAS domain APA12_RS11990 bd0a17f9b1af36a51e0acf4bb4022d49 563 PANTHER PTHR11814 22 553 4.2E-115 T 19-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 APA12_RS11990 bd0a17f9b1af36a51e0acf4bb4022d49 563 Pfam PF00916 Sulfate permease family 22 388 1.4E-67 T 19-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 APA12_RS11990 bd0a17f9b1af36a51e0acf4bb4022d49 563 Gene3D G3DSA:3.30.750.24 443 554 2.7E-12 T 19-04-2016 IPR002645 STAS domain APA12_RS10780 ee820c08200ffb23453cb1b00a6774c5 381 Pfam PF13641 Glycosyltransferase like family 2 60 274 1.1E-11 T 19-04-2016 APA12_RS10780 ee820c08200ffb23453cb1b00a6774c5 381 SUPERFAMILY SSF53448 53 187 6.38E-27 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS10780 ee820c08200ffb23453cb1b00a6774c5 381 SUPERFAMILY SSF53448 217 347 6.38E-27 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS10780 ee820c08200ffb23453cb1b00a6774c5 381 Gene3D G3DSA:3.90.550.10 55 313 2.8E-18 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS09205 1fc72626c00d794702136ab1d05975e0 219 Pfam PF05598 Transposase domain (DUF772) 38 109 3.0E-22 T 19-04-2016 IPR008490 Transposase InsH, N-terminal APA12_RS09205 1fc72626c00d794702136ab1d05975e0 219 PANTHER PTHR35604 38 146 1.7E-14 T 19-04-2016 APA12_RS05090 b30b0f6ca5cf867a78274190625058e8 222 PANTHER PTHR11260 1 206 8.3E-63 T 19-04-2016 APA12_RS05090 b30b0f6ca5cf867a78274190625058e8 222 Gene3D G3DSA:1.20.1050.10 92 217 3.0E-31 T 19-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APA12_RS05090 b30b0f6ca5cf867a78274190625058e8 222 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 78 2.1E-21 T 19-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APA12_RS05090 b30b0f6ca5cf867a78274190625058e8 222 SUPERFAMILY SSF52833 1 102 2.16E-24 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS05090 b30b0f6ca5cf867a78274190625058e8 222 Gene3D G3DSA:3.40.30.10 3 91 1.1E-28 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS05090 b30b0f6ca5cf867a78274190625058e8 222 PANTHER PTHR11260:SF286 1 206 8.3E-63 T 19-04-2016 APA12_RS05090 b30b0f6ca5cf867a78274190625058e8 222 SUPERFAMILY SSF47616 70 215 5.99E-27 T 19-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APA12_RS05090 b30b0f6ca5cf867a78274190625058e8 222 Pfam PF00043 Glutathione S-transferase, C-terminal domain 134 198 1.9E-6 T 19-04-2016 IPR004046 Glutathione S-transferase, C-terminal APA12_RS11920 de0fe53b37c793893ab84c20e5fc17ed 270 Pfam PF01774 UreD urease accessory protein 47 250 1.6E-39 T 19-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 APA12_RS11920 de0fe53b37c793893ab84c20e5fc17ed 270 PANTHER PTHR33643:SF1 34 258 1.3E-24 T 19-04-2016 APA12_RS11920 de0fe53b37c793893ab84c20e5fc17ed 270 Hamap MF_01384 Urease accessory protein UreD [ureD]. 7 262 22.176 T 19-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 APA12_RS11920 de0fe53b37c793893ab84c20e5fc17ed 270 PANTHER PTHR33643 34 258 1.3E-24 T 19-04-2016 APA12_RS09440 0fddf099f4e903f5ac92f1367ea61b09 452 PANTHER PTHR11119:SF9 9 380 1.5E-79 T 19-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 APA12_RS09440 0fddf099f4e903f5ac92f1367ea61b09 452 PANTHER PTHR11119 9 380 1.5E-79 T 19-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APA12_RS09440 0fddf099f4e903f5ac92f1367ea61b09 452 Pfam PF00860 Permease family 27 389 5.4E-23 T 19-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APA12_RS07030 7c0d75c2b1abcd0324e2d0dc38cff448 320 Gene3D G3DSA:1.10.3720.10 101 312 1.1E-17 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS07030 7c0d75c2b1abcd0324e2d0dc38cff448 320 Gene3D G3DSA:1.10.3720.10 28 52 1.1E-17 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS07030 7c0d75c2b1abcd0324e2d0dc38cff448 320 SUPERFAMILY SSF161098 121 300 6.54E-25 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS07030 7c0d75c2b1abcd0324e2d0dc38cff448 320 PANTHER PTHR30151:SF0 91 319 1.2E-49 T 19-04-2016 APA12_RS07030 7c0d75c2b1abcd0324e2d0dc38cff448 320 PANTHER PTHR30151 91 319 1.2E-49 T 19-04-2016 APA12_RS07030 7c0d75c2b1abcd0324e2d0dc38cff448 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 143 305 1.4E-17 T 19-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APA12_RS08900 1b88e79b0033348ab3fc6218a626a811 609 Pfam PF13641 Glycosyltransferase like family 2 167 383 2.6E-7 T 19-04-2016 APA12_RS08900 1b88e79b0033348ab3fc6218a626a811 609 Gene3D G3DSA:3.90.550.10 166 364 8.2E-4 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS08900 1b88e79b0033348ab3fc6218a626a811 609 SUPERFAMILY SSF53448 167 407 1.97E-15 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS06320 2130198559a1215fbf16fd532904491c 174 Gene3D G3DSA:1.10.940.10 16 162 1.9E-29 T 19-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APA12_RS06320 2130198559a1215fbf16fd532904491c 174 Pfam PF01029 NusB family 19 155 4.8E-21 T 19-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APA12_RS06320 2130198559a1215fbf16fd532904491c 174 PANTHER PTHR11078 7 173 2.3E-22 T 19-04-2016 IPR011605 NusB antitermination factor GO:0006353 APA12_RS06320 2130198559a1215fbf16fd532904491c 174 SUPERFAMILY SSF48013 16 159 3.79E-25 T 19-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APA12_RS06320 2130198559a1215fbf16fd532904491c 174 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 17 158 4.2E-30 T 19-04-2016 IPR011605 NusB antitermination factor GO:0006353 APA12_RS01795 67d6db54b509fd7ef4f1a5b33399027b 226 Pfam PF10938 YfdX protein 48 210 5.0E-43 T 19-04-2016 IPR021236 Uncharacterised protein family YfdX APA12_RS00285 df92c0149938f281126ed6ef3060a098 111 Pfam PF09538 Protein of unknown function (FYDLN_acid) 1 98 8.3E-26 T 19-04-2016 IPR012644 Conserved hypothetical protein CHP02300, FYDLN acid APA12_RS00285 df92c0149938f281126ed6ef3060a098 111 TIGRFAM TIGR02300 FYDLN_acid: TIGR02300 family protein 1 101 3.1E-11 T 19-04-2016 IPR012644 Conserved hypothetical protein CHP02300, FYDLN acid APA12_RS03100 b304f35a17a414470d0d16f2024518ee 76 Pfam PF11324 Protein of unknown function (DUF3126) 9 71 7.0E-25 T 19-04-2016 IPR021473 Protein of unknown function DUF3126 APA12_RS05305 698d09c15d28ff6d9d94577cfd39023d 75 Pfam PF04325 Protein of unknown function (DUF465) 29 73 4.1E-9 T 19-04-2016 IPR007420 Protein of unknown function DUF465 APA12_RS09185 56c0eb0f2fa68e3f133b34d935b70138 479 SUPERFAMILY SSF53098 176 416 1.44E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS09185 56c0eb0f2fa68e3f133b34d935b70138 479 Pfam PF13701 Transposase DDE domain group 1 31 476 2.4E-164 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS02220 f32af523b28cb7fc879bc23c206f64e6 402 Pfam PF01594 Domain of unknown function DUF20 65 388 2.7E-48 T 19-04-2016 IPR002549 Transmembrane protein TqsA-like APA12_RS02220 f32af523b28cb7fc879bc23c206f64e6 402 PANTHER PTHR21716:SF7 55 392 1.2E-62 T 19-04-2016 APA12_RS02220 f32af523b28cb7fc879bc23c206f64e6 402 PANTHER PTHR21716 55 392 1.2E-62 T 19-04-2016 IPR002549 Transmembrane protein TqsA-like APA12_RS02510 95032f433f12eb0beb6e57db0484cc71 143 Pfam PF07007 Protein of unknown function (DUF1311) 31 118 3.3E-12 T 19-04-2016 IPR009739 Protein of unknown function DUF1311 APA12_RS09235 f742ddd49e22c647548e8fe67971d668 192 Pfam PF01609 Transposase DDE domain 45 179 1.8E-10 T 19-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 APA12_RS03090 c0c0e2b116b4242911da6f47561df323 622 Pfam PF13372 Alginate export 413 611 5.5E-23 T 19-04-2016 IPR025388 Alginate export domain UniPathway: UPA00286 APA12_RS08210 902038c194831b51c7f10e3e0a055692 141 PANTHER PTHR30007 1 115 1.2E-14 T 19-04-2016 APA12_RS08210 902038c194831b51c7f10e3e0a055692 141 PANTHER PTHR30007:SF21 1 115 1.2E-14 T 19-04-2016 APA12_RS08210 902038c194831b51c7f10e3e0a055692 141 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 11 82 1.4E-19 T 19-04-2016 IPR025161 Putative transposase IS4/IS5 family APA12_RS08980 cee6cc5992669eabfe1fc921c045b525 185 SUPERFAMILY SSF52799 14 144 1.09E-12 T 19-04-2016 IPR029021 Protein-tyrosine phosphatase-like APA12_RS08980 cee6cc5992669eabfe1fc921c045b525 185 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 89 99 - T 19-04-2016 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311|GO:0016791 APA12_RS08980 cee6cc5992669eabfe1fc921c045b525 185 Gene3D G3DSA:3.90.190.10 4 134 4.7E-12 T 19-04-2016 IPR029021 Protein-tyrosine phosphatase-like APA12_RS01775 5193cec911e6c78b3cff81d4d3331913 366 Pfam PF01757 Acyltransferase family 10 342 4.3E-20 T 19-04-2016 IPR002656 Acyltransferase 3 GO:0016747 APA12_RS01775 5193cec911e6c78b3cff81d4d3331913 366 PANTHER PTHR23028 11 356 5.2E-17 T 19-04-2016 APA12_RS05130 27ae64b325a965b61eba23e1b2066ac9 194 Pfam PF02698 DUF218 domain 41 173 8.1E-11 T 19-04-2016 IPR003848 Domain of unknown function DUF218 APA12_RS05130 27ae64b325a965b61eba23e1b2066ac9 194 Gene3D G3DSA:3.40.50.620 91 150 6.3E-8 T 19-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APA12_RS01930 b9d877ccc7a2bcdcc238cc1ac87d25bf 247 PANTHER PTHR30296 2 247 5.0E-96 T 19-04-2016 APA12_RS01930 b9d877ccc7a2bcdcc238cc1ac87d25bf 247 Pfam PF02754 Cysteine-rich domain 128 221 1.7E-11 T 19-04-2016 IPR004017 Cysteine-rich domain APA12_RS01930 b9d877ccc7a2bcdcc238cc1ac87d25bf 247 Pfam PF02754 Cysteine-rich domain 4 83 3.1E-12 T 19-04-2016 IPR004017 Cysteine-rich domain APA12_RS01930 b9d877ccc7a2bcdcc238cc1ac87d25bf 247 PANTHER PTHR30296:SF0 2 247 5.0E-96 T 19-04-2016 APA12_RS08630 e4a75f166a27c32c6386dea97bfba43e 185 Pfam PF04355 SmpA / OmlA family 39 113 1.6E-13 T 19-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 APA12_RS06630 6fc648ee8e9e570455b72effe831b637 394 PIRSF PIRSF029171 18 389 2.7E-118 T 19-04-2016 IPR005152 Lipase, secreted GO:0004806|GO:0016042 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 APA12_RS06630 6fc648ee8e9e570455b72effe831b637 394 SUPERFAMILY SSF53474 70 248 1.26E-23 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS06630 6fc648ee8e9e570455b72effe831b637 394 SUPERFAMILY SSF53474 296 362 1.26E-23 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS06630 6fc648ee8e9e570455b72effe831b637 394 Pfam PF03583 Secretory lipase 124 242 4.5E-14 T 19-04-2016 IPR005152 Lipase, secreted GO:0004806|GO:0016042 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 APA12_RS06630 6fc648ee8e9e570455b72effe831b637 394 Gene3D G3DSA:3.40.50.1820 309 366 2.8E-20 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS06630 6fc648ee8e9e570455b72effe831b637 394 Gene3D G3DSA:3.40.50.1820 75 218 2.8E-20 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS01520 2fe967430f33338c3af4527453b4fa91 272 Pfam PF09849 Uncharacterized protein conserved in bacteria (DUF2076) 1 270 2.0E-67 T 19-04-2016 IPR018648 Protein of unknown function DUF2076 APA12_RS02935 c36c6ee401be3a92aeee776ac7ecf18c 499 PANTHER PTHR11699 10 489 5.6E-216 T 19-04-2016 APA12_RS02935 c36c6ee401be3a92aeee776ac7ecf18c 499 Gene3D G3DSA:3.40.309.10 277 458 1.4E-66 T 19-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APA12_RS02935 c36c6ee401be3a92aeee776ac7ecf18c 499 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 262 269 - T 19-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 APA12_RS02935 c36c6ee401be3a92aeee776ac7ecf18c 499 Pfam PF00171 Aldehyde dehydrogenase family 25 486 1.2E-166 T 19-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APA12_RS02935 c36c6ee401be3a92aeee776ac7ecf18c 499 Gene3D G3DSA:3.40.605.10 16 276 2.7E-90 T 19-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APA12_RS02935 c36c6ee401be3a92aeee776ac7ecf18c 499 SUPERFAMILY SSF53720 7 490 3.53E-164 T 19-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APA12_RS02270 fce7973eb85b13e7628fce73bce3f454 161 Pfam PF05232 Chlorhexidine efflux transporter 86 148 6.4E-21 T 19-04-2016 IPR007896 Chlorhexidine efflux transporter APA12_RS02270 fce7973eb85b13e7628fce73bce3f454 161 Pfam PF05232 Chlorhexidine efflux transporter 16 79 6.5E-22 T 19-04-2016 IPR007896 Chlorhexidine efflux transporter APA12_RS02270 fce7973eb85b13e7628fce73bce3f454 161 PANTHER PTHR42641 12 150 3.5E-24 T 19-04-2016 APA12_RS05855 af26151b5c676dca0f05b5bc56b9b136 120 Pfam PF03891 Domain of unknown function (DUF333) 69 114 3.1E-21 T 19-04-2016 IPR005590 Protein of unknown function DUF333 APA12_RS00445 dad6cfdc194af965fc7a5098c4bd1dd1 187 Gene3D G3DSA:3.90.1140.10 7 174 6.1E-6 T 19-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase APA12_RS02305 55445f3aa182f520810aaa7e316ae934 453 Pfam PF07642 Putative beta-barrel porin-2, OmpL-like. bbp2 71 432 1.2E-41 T 19-04-2016 IPR011486 Putative beta-barrel porin-2, OmpL-like. bbp2 APA12_RS08545 2182f555d6f4d5a974f7831ef8ad191a 497 PANTHER PTHR33908:SF1 21 325 5.0E-51 T 19-04-2016 APA12_RS08545 2182f555d6f4d5a974f7831ef8ad191a 497 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 55 226 3.4E-19 T 19-04-2016 APA12_RS08545 2182f555d6f4d5a974f7831ef8ad191a 497 PANTHER PTHR33908 21 325 5.0E-51 T 19-04-2016 APA12_RS11340 3e6661630baa045eb2dec0994835b97f 530 PANTHER PTHR37944 131 530 2.8E-40 T 19-04-2016 APA12_RS11340 3e6661630baa045eb2dec0994835b97f 530 Pfam PF04966 Carbohydrate-selective porin, OprB family 160 526 2.0E-63 T 19-04-2016 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 APA12_RS12065 b3dcf35500eeb430ce56e4d09302061f 345 SUPERFAMILY SSF144052 147 342 8.63E-7 T 19-04-2016 APA12_RS11145 7692e3b90eeacffeae3c233efc6765d0 318 PANTHER PTHR23024 66 304 1.7E-69 T 19-04-2016 APA12_RS11145 7692e3b90eeacffeae3c233efc6765d0 318 Gene3D G3DSA:3.40.50.1820 7 317 6.5E-84 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS11145 7692e3b90eeacffeae3c233efc6765d0 318 PANTHER PTHR23024:SF195 66 304 1.7E-69 T 19-04-2016 APA12_RS11145 7692e3b90eeacffeae3c233efc6765d0 318 Pfam PF07859 alpha/beta hydrolase fold 83 291 8.4E-62 T 19-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 APA12_RS11145 7692e3b90eeacffeae3c233efc6765d0 318 SUPERFAMILY SSF53474 33 316 6.78E-65 T 19-04-2016 IPR029058 Alpha/Beta hydrolase fold APA12_RS03595 9d6b6e5365a86c2a63d792df9b6781fc 116 Pfam PF04241 Protein of unknown function (DUF423) 13 98 9.0E-12 T 19-04-2016 IPR006696 Protein of unknown function DUF423 APA12_RS07925 0e3ba98f982a4ddff19571355d4a5e0b 93 Gene3D G3DSA:3.40.630.30 2 91 2.9E-22 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase APA12_RS07925 0e3ba98f982a4ddff19571355d4a5e0b 93 Pfam PF14542 GCN5-related N-acetyl-transferase 14 90 2.8E-19 T 19-04-2016 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase APA12_RS07925 0e3ba98f982a4ddff19571355d4a5e0b 93 SUPERFAMILY SSF55729 4 91 1.35E-20 T 19-04-2016 IPR016181 Acyl-CoA N-acyltransferase APA12_RS07925 0e3ba98f982a4ddff19571355d4a5e0b 93 PANTHER PTHR31435 7 91 2.5E-19 T 19-04-2016 APA12_RS06325 31bcda9a1de0fe8aaeddbb5cc6d5b61c 158 PANTHER PTHR30455 2 156 1.9E-63 T 19-04-2016 APA12_RS06325 31bcda9a1de0fe8aaeddbb5cc6d5b61c 158 Pfam PF03477 ATP cone domain 50 135 1.6E-18 T 19-04-2016 IPR005144 ATP-cone domain APA12_RS06325 31bcda9a1de0fe8aaeddbb5cc6d5b61c 158 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 82.692 T 19-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 APA12_RS06325 31bcda9a1de0fe8aaeddbb5cc6d5b61c 158 PANTHER PTHR30455:SF2 2 156 1.9E-63 T 19-04-2016 APA12_RS06325 31bcda9a1de0fe8aaeddbb5cc6d5b61c 158 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 144 2.5E-50 T 19-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 APA12_RS06865 f0adff278f76cffbe86a4b5f6cb1ee91 341 PIRSF PIRSF018266 22 341 2.3E-65 T 19-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component APA12_RS06865 f0adff278f76cffbe86a4b5f6cb1ee91 341 Pfam PF16220 Domain of unknown function (DUF4880) 31 72 1.2E-10 T 19-04-2016 IPR032623 FecR, N-terminal APA12_RS06865 f0adff278f76cffbe86a4b5f6cb1ee91 341 PANTHER PTHR30273 23 336 2.2E-38 T 19-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component APA12_RS06865 f0adff278f76cffbe86a4b5f6cb1ee91 341 Pfam PF04773 FecR protein 139 229 9.2E-17 T 19-04-2016 IPR006860 FecR protein APA12_RS06865 f0adff278f76cffbe86a4b5f6cb1ee91 341 PANTHER PTHR30273:SF3 23 336 2.2E-38 T 19-04-2016 APA12_RS11085 bdca2e2cfff92d0c3c534d529893d6cc 484 PANTHER PTHR11819:SF2 5 474 2.7E-142 T 19-04-2016 APA12_RS11085 bdca2e2cfff92d0c3c534d529893d6cc 484 Pfam PF00474 Sodium:solute symporter family 47 382 3.3E-19 T 19-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APA12_RS11085 bdca2e2cfff92d0c3c534d529893d6cc 484 PANTHER PTHR11819 5 474 2.7E-142 T 19-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APA12_RS00155 42edd5e39cbe2cbb9fb4fcec16e8f1ba 137 SUPERFAMILY SSF81343 19 127 6.32E-22 T 19-04-2016 APA12_RS00155 42edd5e39cbe2cbb9fb4fcec16e8f1ba 137 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 25 127 8.2E-20 T 19-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 APA12_RS00155 42edd5e39cbe2cbb9fb4fcec16e8f1ba 137 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 14 111 8.3E-13 T 19-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 APA12_RS00155 42edd5e39cbe2cbb9fb4fcec16e8f1ba 137 Gene3D G3DSA:1.20.1300.10 18 127 1.7E-21 T 19-04-2016 APA12_RS00230 6fb3dda122d3db743f954093aad97c5d 121 PANTHER PTHR30432 1 112 6.1E-18 T 19-04-2016 APA12_RS00230 6fb3dda122d3db743f954093aad97c5d 121 SUPERFAMILY SSF46785 4 102 1.09E-22 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS00230 6fb3dda122d3db743f954093aad97c5d 121 Gene3D G3DSA:1.10.10.10 2 113 1.6E-37 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS00230 6fb3dda122d3db743f954093aad97c5d 121 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 23 82 8.2E-12 T 19-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APA12_RS02470 1eff2ec84d58c9c4e9313c752928dd35 220 SMART SM00974 28 106 3.4E-20 T 19-04-2016 IPR018306 Bacteriophage T5, Orf172 DNA-binding APA12_RS02470 1eff2ec84d58c9c4e9313c752928dd35 220 Pfam PF10544 T5orf172 domain 20 105 4.4E-16 T 19-04-2016 IPR018306 Bacteriophage T5, Orf172 DNA-binding APA12_RS00135 0e9dd22ecc4c274e75bfde76b186659a 108 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 13 95 5.2E-29 T 19-04-2016 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2 APA12_RS01320 c2d22acb7ef2299436cb37af01efe326 247 PANTHER PTHR36180 8 142 1.0E-27 T 19-04-2016 APA12_RS01320 c2d22acb7ef2299436cb37af01efe326 247 PANTHER PTHR36180:SF2 8 142 1.0E-27 T 19-04-2016 APA12_RS01320 c2d22acb7ef2299436cb37af01efe326 247 Pfam PF03374 Phage antirepressor protein KilAC domain 136 239 4.3E-30 T 19-04-2016 IPR005039 Antirepressor protein, C-terminal GO:0003677 APA12_RS01320 c2d22acb7ef2299436cb37af01efe326 247 Pfam PF02498 BRO family, N-terminal domain 14 99 8.8E-21 T 19-04-2016 IPR003497 BRO N-terminal domain APA12_RS01320 c2d22acb7ef2299436cb37af01efe326 247 SMART SM01040 14 99 1.8E-36 T 19-04-2016 IPR003497 BRO N-terminal domain APA12_RS15315 e413c0eb64dc7acfa47735c9d8e0695b 124 Pfam PF13546 DDE superfamily endonuclease 1 78 4.3E-15 T 19-04-2016 APA12_RS02965 dd79df9f9f601f63996c41b83b092592 585 Gene3D G3DSA:2.170.16.10 234 377 1.4E-6 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS02965 dd79df9f9f601f63996c41b83b092592 585 SUPERFAMILY SSF51294 236 372 2.35E-13 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS02965 dd79df9f9f601f63996c41b83b092592 585 Pfam PF13403 Hint domain 236 374 1.3E-41 T 19-04-2016 IPR028992 Hedgehog/Intein (Hint) domain APA12_RS02920 d9fce99e4ee0add71131db0c49383ed0 461 SUPERFAMILY SSF53098 155 398 1.82E-5 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS02920 d9fce99e4ee0add71131db0c49383ed0 461 Pfam PF13701 Transposase DDE domain group 1 13 458 3.9E-165 T 19-04-2016 IPR025668 Transposase DDE domain APA12_RS07200 ab2ea0955ef9bcbc10aba25f4545be70 194 SUPERFAMILY SSF116734 7 192 1.96E-38 T 19-04-2016 APA12_RS07200 ab2ea0955ef9bcbc10aba25f4545be70 194 Pfam PF01420 Type I restriction modification DNA specificity domain 16 164 5.4E-19 T 19-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 APA12_RS04945 769728a02fd2404157f053ab4fe1b1dc 525 PANTHER PTHR23501:SF69 19 512 6.1E-128 T 19-04-2016 APA12_RS04945 769728a02fd2404157f053ab4fe1b1dc 525 SUPERFAMILY SSF103473 489 512 7.32E-69 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS04945 769728a02fd2404157f053ab4fe1b1dc 525 SUPERFAMILY SSF103473 13 206 7.32E-69 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS04945 769728a02fd2404157f053ab4fe1b1dc 525 SUPERFAMILY SSF103473 258 429 7.32E-69 T 19-04-2016 IPR020846 Major facilitator superfamily domain APA12_RS04945 769728a02fd2404157f053ab4fe1b1dc 525 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 21 502 4.6E-124 T 19-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 APA12_RS04945 769728a02fd2404157f053ab4fe1b1dc 525 Pfam PF07690 Major Facilitator Superfamily 26 419 4.4E-50 T 19-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APA12_RS04945 769728a02fd2404157f053ab4fe1b1dc 525 PANTHER PTHR23501 19 512 6.1E-128 T 19-04-2016 APA12_RS04945 769728a02fd2404157f053ab4fe1b1dc 525 Gene3D G3DSA:1.20.1250.20 23 205 9.2E-34 T 19-04-2016 APA12_RS04945 769728a02fd2404157f053ab4fe1b1dc 525 Gene3D G3DSA:1.20.1250.20 490 512 7.6E-14 T 19-04-2016 APA12_RS04945 769728a02fd2404157f053ab4fe1b1dc 525 Gene3D G3DSA:1.20.1250.20 273 430 7.6E-14 T 19-04-2016 APA12_RS04945 769728a02fd2404157f053ab4fe1b1dc 525 PRINTS PR01036 Tetracycline resistance protein TetB signature 145 169 6.88E-6 T 19-04-2016 APA12_RS04945 769728a02fd2404157f053ab4fe1b1dc 525 PRINTS PR01036 Tetracycline resistance protein TetB signature 24 48 6.88E-6 T 19-04-2016 APA12_RS12385 5a42e4fae7e50282baf10ad639202d20 385 PANTHER PTHR30188 47 379 5.0E-54 T 19-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 APA12_RS12385 5a42e4fae7e50282baf10ad639202d20 385 Pfam PF02405 Permease MlaE 171 379 9.4E-56 T 19-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 APA12_RS12205 b21e90b1aecdc740a000b90be6cf4a87 89 SUPERFAMILY SSF46955 11 61 1.46E-8 T 19-04-2016 IPR009061 Putative DNA-binding domain APA12_RS12205 b21e90b1aecdc740a000b90be6cf4a87 89 Gene3D G3DSA:1.10.10.10 12 61 8.5E-5 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS05135 8a69892945459790d6b61b73189a788e 315 Pfam PF02687 FtsX-like permease family 182 306 4.5E-6 T 19-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APA12_RS12665 5419aa8d3ad864ed3ed8cda798d5627c 510 Pfam PF10091 Putative glucoamylase 243 478 4.3E-81 T 19-04-2016 IPR019282 Domain of unknown function DUF2329 APA12_RS12665 5419aa8d3ad864ed3ed8cda798d5627c 510 PIRSF PIRSF028431 29 503 5.9E-161 T 19-04-2016 IPR016883 Uncharacterised conserved protein UCP028431 APA12_RS07105 e9728c7f0b0ca784e981ac0bad257f46 148 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 7 77 1.3E-21 T 19-04-2016 IPR025161 Putative transposase IS4/IS5 family APA12_RS07105 e9728c7f0b0ca784e981ac0bad257f46 148 PANTHER PTHR30007 6 121 7.1E-20 T 19-04-2016 APA12_RS07105 e9728c7f0b0ca784e981ac0bad257f46 148 PANTHER PTHR30007:SF0 6 121 7.1E-20 T 19-04-2016 APA12_RS02430 3fd6dc1c6b6cf2721b8b848d23a08616 228 Pfam PF06912 Protein of unknown function (DUF1275) 18 214 2.6E-27 T 19-04-2016 IPR010699 Protein of unknown function DUF1275 APA12_RS02045 fece7d337eef104b3cec840aeac0b186 192 Pfam PF09335 SNARE associated Golgi protein 38 155 1.2E-8 T 19-04-2016 IPR032816 SNARE associated Golgi protein APA12_RS01365 0c36509084dc62c86e7672326a0bbff2 147 Pfam PF01610 Transposase 2 92 5.4E-17 T 19-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain APA12_RS07660 b8a45d980f81bdcc3b6a2a542e542fca 276 Gene3D G3DSA:3.90.730.10 43 258 2.2E-26 T 19-04-2016 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 APA12_RS07660 b8a45d980f81bdcc3b6a2a542e542fca 276 SUPERFAMILY SSF55895 43 256 2.49E-24 T 19-04-2016 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 APA12_RS07660 b8a45d980f81bdcc3b6a2a542e542fca 276 Pfam PF00445 Ribonuclease T2 family 47 230 3.6E-12 T 19-04-2016 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 APA12_RS00070 2fe06a97760a5c631c455635f7ffdca1 411 SUPERFAMILY SSF52540 13 76 4.55E-12 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS00070 2fe06a97760a5c631c455635f7ffdca1 411 SUPERFAMILY SSF52540 124 212 4.55E-12 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS00070 2fe06a97760a5c631c455635f7ffdca1 411 Gene3D G3DSA:3.40.50.300 7 216 8.0E-11 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS00070 2fe06a97760a5c631c455635f7ffdca1 411 Pfam PF09848 Uncharacterized conserved protein (DUF2075) 49 396 1.3E-105 T 19-04-2016 IPR018647 Domain of unknown function DUF2075 APA12_RS04475 8668d315cfa8f1b461227604c39aa0f2 316 Pfam PF02470 MlaD protein 57 132 1.9E-9 T 19-04-2016 IPR003399 Mce/MlaD APA12_RS13145 7e3b89eaccd6c6cbc2956c97c2091c2f 315 SUPERFAMILY SSF53448 12 226 1.88E-32 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS13145 7e3b89eaccd6c6cbc2956c97c2091c2f 315 Pfam PF00535 Glycosyl transferase family 2 14 127 2.9E-10 T 19-04-2016 IPR001173 Glycosyltransferase 2-like APA12_RS13145 7e3b89eaccd6c6cbc2956c97c2091c2f 315 PANTHER PTHR22916 12 314 6.2E-19 T 19-04-2016 APA12_RS13145 7e3b89eaccd6c6cbc2956c97c2091c2f 315 Gene3D G3DSA:3.90.550.10 12 224 1.4E-28 T 19-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APA12_RS06490 1a5d274d2b988759b0b920fa2dd84d85 62 Pfam PF13318 Protein of unknown function (DUF4089) 12 57 2.7E-14 T 19-04-2016 IPR025148 Protein of unknown function DUF4089 APA12_RS11870 88af2b49d472273da9626c27728ba3dc 150 Gene3D G3DSA:3.30.420.10 107 149 9.5E-9 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS11870 88af2b49d472273da9626c27728ba3dc 150 Pfam PF13276 HTH-like domain 35 91 7.7E-15 T 19-04-2016 IPR025948 HTH-like domain APA12_RS11870 88af2b49d472273da9626c27728ba3dc 150 PANTHER PTHR32552 13 150 3.6E-20 T 19-04-2016 APA12_RS11870 88af2b49d472273da9626c27728ba3dc 150 SUPERFAMILY SSF53098 111 150 9.48E-12 T 19-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APA12_RS05730 c5863dfd660e214982fb9c5a06d2b0e2 143 Pfam PF13763 Domain of unknown function (DUF4167) 15 90 4.4E-32 T 19-04-2016 IPR025430 Domain of unknown function DUF4167 APA12_RS08440 086887ec170104179e96ae2f398a043b 932 SUPERFAMILY SSF51621 48 868 3.14E-106 T 19-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APA12_RS08440 086887ec170104179e96ae2f398a043b 932 Pfam PF00311 Phosphoenolpyruvate carboxylase 409 554 1.6E-11 T 19-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APA12_RS01680 0f0534bd3f0a95a93d825efd917dc829 175 Pfam PF10696 Protein of unknown function (DUF2501) 106 173 4.2E-6 T 19-04-2016 IPR019637 Protein of unknown function DUF2501 APA12_RS04180 8604cfc6073739c1de12bcb3642c95fe 84 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 23 81 1.5E-9 T 19-04-2016 IPR012933 HicA mRNA interferase family GO:0003729 APA12_RS11510 983fd40223d90d47ee6fa745d09bd7d0 307 Pfam PF10030 Uncharacterized protein conserved in bacteria (DUF2272) 106 295 3.9E-59 T 19-04-2016 IPR019262 Domain of unknown function DUF2272 APA12_RS02285 79a416f096139faf28739baea59ba397 180 Pfam PF07291 Methylamine utilisation protein MauE 17 161 5.6E-23 T 19-04-2016 IPR009908 Methylamine utilisation protein, MauE GO:0016021|GO:0030416 UniPathway: UPA00895 APA12_RS02095 30dfa52e35b74bb7ad4aed0ea743b269 178 Pfam PF06897 Protein of unknown function (DUF1269) 65 168 1.5E-34 T 19-04-2016 IPR009200 Protein of unknown function DUF1269, membrane associated APA12_RS01835 569c1d5a5eb242c457bbb394a2c2ddb1 188 Pfam PF07799 Protein of unknown function (DUF1643) 36 170 1.7E-42 T 19-04-2016 IPR012441 Protein of unknown function DUF1643 APA12_RS11945 2ebb2c84f498d286c46f1d063a551c3c 341 Pfam PF13387 Domain of unknown function (DUF4105) 126 265 7.6E-39 T 19-04-2016 IPR025178 Domain of unknown function DUF4105 APA12_RS12400 f9f2d375840fcc5028c282e6e55a5f62 196 Gene3D G3DSA:3.40.50.10610 20 152 2.2E-14 T 19-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component APA12_RS12400 f9f2d375840fcc5028c282e6e55a5f62 196 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 30 188 5.5E-25 T 19-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component APA12_RS12400 f9f2d375840fcc5028c282e6e55a5f62 196 SUPERFAMILY SSF159594 28 189 1.91E-17 T 19-04-2016 APA12_RS10215 10c29579ebfd9621820a5c42ed8979e5 412 SUPERFAMILY SSF56563 116 397 3.01E-71 T 19-04-2016 APA12_RS10215 10c29579ebfd9621820a5c42ed8979e5 412 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 13 394 8.0E-51 T 19-04-2016 IPR006444 Phage major capsid protein, HK97 APA12_RS10215 10c29579ebfd9621820a5c42ed8979e5 412 Pfam PF05065 Phage capsid family 125 394 1.6E-51 T 19-04-2016 IPR024455 Phage capsid APA12_RS13365 bdf816a06b82825f34d524be0dcd93c4 166 Pfam PF10722 Putative bacterial sensory transduction regulator 15 142 3.1E-26 T 19-04-2016 IPR019660 Putative sensory transduction regulator YbjN APA12_RS05910 fa2615917278a28c580668d6762146b2 281 Pfam PF04366 Las17-binding protein actin regulator 107 228 1.5E-21 T 19-04-2016 IPR007461 Ysc84 actin-binding domain APA12_RS05910 fa2615917278a28c580668d6762146b2 281 PANTHER PTHR15629 72 226 5.5E-12 T 19-04-2016 APA12_RS03895 95b27a920e363cc78ea6acb8c9d3c0c4 360 Pfam PF09898 Uncharacterized protein conserved in bacteria (DUF2125) 25 336 1.5E-48 T 19-04-2016 IPR018666 Protein of unknown function DUF2125 APA12_RS07685 d6f5367feba8c73539d9aae3019f1d43 398 Pfam PF12006 Protein of unknown function (DUF3500) 120 392 6.5E-77 T 19-04-2016 IPR021889 Protein of unknown function DUF3500 APA12_RS07685 d6f5367feba8c73539d9aae3019f1d43 398 PANTHER PTHR37489 122 392 8.0E-50 T 19-04-2016 APA12_RS01440 d3356fbf3b732aebfcc0039cfbe2383c 132 Gene3D G3DSA:3.30.1330.40 36 100 6.0E-9 T 19-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APA12_RS01440 d3356fbf3b732aebfcc0039cfbe2383c 132 SUPERFAMILY SSF55298 25 108 5.5E-11 T 19-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APA12_RS00700 49129647811c28c4b99dfc0a890c4035 261 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 18 245 4.3E-85 T 19-04-2016 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 APA12_RS00700 49129647811c28c4b99dfc0a890c4035 261 PIRSF PIRSF018982 1 255 2.6E-88 T 19-04-2016 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 APA12_RS00700 49129647811c28c4b99dfc0a890c4035 261 PANTHER PTHR39330 14 259 3.1E-74 T 19-04-2016 APA12_RS10715 b4e0f11bb8ed473c4f28cc839b345046 71 Gene3D G3DSA:2.60.260.40 16 61 7.3E-19 T 19-04-2016 IPR019401 Zinc finger, CHCC-type APA12_RS10715 b4e0f11bb8ed473c4f28cc839b345046 71 Pfam PF10276 Zinc-finger domain 25 59 4.1E-15 T 19-04-2016 IPR019401 Zinc finger, CHCC-type APA12_RS10220 797e6e165f99625461b5a196954ed5d8 283 Pfam PF04586 Caudovirus prohead serine protease 20 170 5.2E-24 T 19-04-2016 IPR006433 Prohead protease APA12_RS10220 797e6e165f99625461b5a196954ed5d8 283 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 26 171 1.4E-28 T 19-04-2016 IPR006433 Prohead protease APA12_RS02480 b2f06acb296ea273f84518def2bef4a4 229 Pfam PF06776 Invasion associated locus B (IalB) protein 72 217 4.9E-17 T 19-04-2016 IPR010642 Invasion protein B APA12_RS12755 098570fd9fb93486dc43c58e054a6877 247 Pfam PF10938 YfdX protein 65 231 2.6E-41 T 19-04-2016 IPR021236 Uncharacterised protein family YfdX APA12_RS00670 dd976f0eb8c65d7c4cbef64dc3eb59cf 265 Gene3D G3DSA:2.40.160.10 139 263 1.6E-26 T 19-04-2016 IPR023614 Porin domain APA12_RS02390 5e1b8f03e607821558cd4f277b96fe30 101 SUPERFAMILY SSF56349 1 71 9.42E-12 T 19-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APA12_RS08215 e75ff1759cdd2c05a07dad0c1226300d 277 Pfam PF11306 Protein of unknown function (DUF3108) 32 270 9.1E-14 T 19-04-2016 IPR021457 Protein of unknown function DUF3108 APA12_RS12135 95ccf9a9f32ce319a80ac0c7a72727e5 177 Pfam PF03524 Conjugal transfer protein 101 155 6.9E-12 T 19-04-2016 IPR010258 Conjugal transfer, TrbG/VirB9/CagX APA12_RS03515 867462f0cf2aba857df044c6bec435ef 343 SUPERFAMILY SSF52540 75 272 4.91E-10 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS03515 867462f0cf2aba857df044c6bec435ef 343 Gene3D G3DSA:3.40.50.300 97 272 1.4E-7 T 19-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APA12_RS04370 c76b8401855624e2762ed9b4747db9bb 933 Pfam PF13779 Domain of unknown function (DUF4175) 38 931 5.9E-222 T 19-04-2016 IPR012683 Conserved hypothetical protein CHP02302, transmembrane APA12_RS03105 4a1119fb153d65a9c390bbfaff1f2c0c 203 Pfam PF11159 Protein of unknown function (DUF2939) 31 117 2.3E-20 T 19-04-2016 IPR021330 Protein of unknown function DUF2939 APA12_RS06485 1ba09c38757521491e207a0cf1ec4c1c 134 SUPERFAMILY SSF54427 1 123 1.34E-34 T 19-04-2016 IPR032710 NTF2-like domain APA12_RS06485 1ba09c38757521491e207a0cf1ec4c1c 134 Gene3D G3DSA:3.10.450.50 1 124 3.8E-52 T 19-04-2016 IPR032710 NTF2-like domain APA12_RS06485 1ba09c38757521491e207a0cf1ec4c1c 134 Pfam PF11533 Protein of unknown function (DUF3225) 1 124 3.1E-52 T 19-04-2016 IPR024507 Protein of unknown function DUF3225 APA12_RS02290 1c0a9b2bc8ea11d0aca3302cfe6941a6 201 Gene3D G3DSA:3.40.30.10 12 179 7.7E-12 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS02290 1c0a9b2bc8ea11d0aca3302cfe6941a6 201 SUPERFAMILY SSF52833 45 166 1.91E-12 T 19-04-2016 IPR012336 Thioredoxin-like fold APA12_RS02555 494dee56c1fcffc203587fc39b463f07 278 SUPERFAMILY SSF46785 34 106 9.59E-5 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS03550 80b06ec3fd93c5039f23d85b9dd7d147 243 Pfam PF06912 Protein of unknown function (DUF1275) 32 221 3.9E-20 T 19-04-2016 IPR010699 Protein of unknown function DUF1275 APA12_RS08765 e8a55a9f1903567d29d1489869565013 231 Pfam PF09976 Tetratricopeptide repeat-like domain 24 210 3.9E-8 T 19-04-2016 IPR018704 Tetratricopeptide repeat-like domain APA12_RS13395 7280b1cc584203d644f1550cf1e4f16f 319 Pfam PF05045 Rhamnan synthesis protein F 83 255 4.8E-9 T 19-04-2016 IPR007739 Rhamnan synthesis F APA12_RS02720 7f22ab372a16c3e815c56085202c6bfd 411 Pfam PF04865 Baseplate J-like protein 91 362 7.5E-19 T 19-04-2016 IPR006949 Baseplate protein J-like APA12_RS15760 cad1eb805ce220f505797f55918b66aa 339 SUPERFAMILY SSF103088 235 327 3.92E-8 T 19-04-2016 IPR006665 OmpA-like domain APA12_RS15760 cad1eb805ce220f505797f55918b66aa 339 Gene3D G3DSA:3.30.1330.60 217 325 5.3E-6 T 19-04-2016 IPR006665 OmpA-like domain APA12_RS07250 c807261d107bf4f58e07edd89f248925 114 Pfam PF03050 Transposase IS66 family 1 98 9.6E-20 T 19-04-2016 IPR004291 Transposase, IS66 APA12_RS12360 9bd9fff7d3d30267e4824318c90d8fdd 61 Pfam PF01679 Proteolipid membrane potential modulator 1 46 1.3E-5 T 19-04-2016 IPR000612 Proteolipid membrane potential modulator GO:0016021 APA12_RS02400 68d4b28b348cc9e658a34d2ef3fe97e5 120 Pfam PF02325 YGGT family 33 105 9.2E-18 T 19-04-2016 IPR003425 CCB3/YggT GO:0016020 APA12_RS08820 cb8a25bda6672cb37065b90dabfc38b5 284 SUPERFAMILY SSF48576 38 212 4.6E-13 T 19-04-2016 IPR008949 Isoprenoid synthase domain APA12_RS08820 cb8a25bda6672cb37065b90dabfc38b5 284 Pfam PF00494 Squalene/phytoene synthase 40 204 9.3E-13 T 19-04-2016 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 APA12_RS05060 af34d400a1a7df15fed7825f684dabaa 551 SUPERFAMILY SSF56935 167 547 2.96E-21 T 19-04-2016 APA12_RS10245 a6a27a408afa60877e95673857ac44ed 210 Pfam PF11363 Protein of unknown function (DUF3164) 10 204 9.1E-71 T 19-04-2016 IPR021505 Bacteriophage B3, Orf6 APA12_RS10230 d6e6cb03441faf10ee972323c09a5a92 597 Pfam PF03354 Phage Terminase 102 574 5.0E-30 T 19-04-2016 IPR005021 Phage terminase APA12_RS10230 d6e6cb03441faf10ee972323c09a5a92 597 PANTHER PTHR41287 11 595 9.8E-35 T 19-04-2016 APA12_RS12330 a745a1319c05e5e85944bb5148d15282 820 Gene3D G3DSA:1.25.40.10 622 746 5.8E-5 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS12330 a745a1319c05e5e85944bb5148d15282 820 Gene3D G3DSA:1.25.40.10 537 568 5.8E-5 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS12330 a745a1319c05e5e85944bb5148d15282 820 SUPERFAMILY SSF48452 616 755 6.51E-6 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS02600 302026f5f35db14821722ed9db6aa1b0 212 Gene3D G3DSA:3.30.50.10 14 40 8.9E-4 T 19-04-2016 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 APA12_RS12830 8720a1d5502a145c659c9b235749de49 72 Pfam PF09489 Probable cobalt transporter subunit (CbtB) 22 72 5.6E-13 T 19-04-2016 IPR012667 Cobalt transporter subunit CbtB, putative APA12_RS05675 b883a95c14f6f4de521a4fadf3b89dfb 170 PANTHER PTHR36919 46 166 3.9E-17 T 19-04-2016 APA12_RS05675 b883a95c14f6f4de521a4fadf3b89dfb 170 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 51 157 3.8E-24 T 19-04-2016 IPR019223 Domain of unknown function DUF2147 APA12_RS11600 dd86590dd70077f7d2e51b6fc4a65983 203 Pfam PF13643 Domain of unknown function (DUF4145) 66 166 5.8E-22 T 19-04-2016 IPR025285 Domain of unknown function DUF4145 APA12_RS10005 c646759d0352c814030440a99ac84808 287 Gene3D G3DSA:1.25.40.10 139 270 1.1E-17 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS10005 c646759d0352c814030440a99ac84808 287 SUPERFAMILY SSF48452 139 270 1.52E-16 T 19-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APA12_RS10005 c646759d0352c814030440a99ac84808 287 SMART SM00028 200 233 0.23 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APA12_RS10005 c646759d0352c814030440a99ac84808 287 SMART SM00028 234 267 3.9 T 19-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APA12_RS08650 ddc0e41884947054f953a9bbab12ee21 219 Pfam PF08511 COQ9 138 205 5.9E-15 T 19-04-2016 IPR013718 COQ9 UniPathway: UPA00232 APA12_RS04420 404cd007ebc4dc9bd369655c1036df1c 595 Pfam PF07940 Heparinase II/III-like protein 301 513 3.0E-40 T 19-04-2016 IPR012480 Heparinase II/III-like MetaCyc: PWY-7651 APA12_RS11285 05ea318ad1161e54bb04d0f8dbb54be7 498 Pfam PF07642 Putative beta-barrel porin-2, OmpL-like. bbp2 103 475 2.0E-39 T 19-04-2016 IPR011486 Putative beta-barrel porin-2, OmpL-like. bbp2 APA12_RS10370 c5fdb922c6249e6b1adade4ceb79197c 74 Gene3D G3DSA:1.10.10.10 9 66 1.4E-5 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS03575 5b554ddfa9cc3f6faa22fba0e82e00ed 72 Gene3D G3DSA:2.30.30.320 4 67 2.0E-21 T 19-04-2016 IPR023387 DUF1653-like domain APA12_RS03575 5b554ddfa9cc3f6faa22fba0e82e00ed 72 Pfam PF07866 Protein of unknown function (DUF1653) 6 60 9.6E-19 T 19-04-2016 IPR023387 DUF1653-like domain APA12_RS09370 9f75937233c796e4790fbc995b527b6b 78 Pfam PF11730 Protein of unknown function (DUF3297) 6 75 2.8E-40 T 19-04-2016 IPR021724 Protein of unknown function DUF3297 APA12_RS08705 b3d168d0f1203818df0697edec30e41c 171 Pfam PF13801 Heavy-metal resistance 7 137 1.4E-8 T 19-04-2016 IPR025961 Heavy-metal resistance protein APA12_RS12280 2d8f6b2cf242507e13d5792a33d32d65 140 Pfam PF10116 Protein required for attachment to host cells 37 128 1.6E-15 T 19-04-2016 IPR019291 Host attachment protein APA12_RS13040 4efdd45cd765cab25be6f8d946f9b2d1 424 Pfam PF04932 O-Antigen ligase 200 356 1.0E-12 T 19-04-2016 IPR007016 O-antigen ligase-related APA12_RS00775 3bc5a5662e5244f532954e81731ac6a4 358 SUPERFAMILY SSF56935 228 357 1.01E-5 T 19-04-2016 APA12_RS00775 3bc5a5662e5244f532954e81731ac6a4 358 SUPERFAMILY SSF56935 60 198 1.01E-5 T 19-04-2016 APA12_RS06805 9e9e322ef5f7583f00dfc33da3a435f1 171 SUPERFAMILY SSF46785 31 160 1.05E-14 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS06805 9e9e322ef5f7583f00dfc33da3a435f1 171 Gene3D G3DSA:1.10.10.10 31 108 6.4E-7 T 19-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APA12_RS02445 e84757dcd214101f6a8850cbe317ca82 130 Pfam PF05656 Protein of unknown function (DUF805) 12 129 1.2E-18 T 19-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 APA12_RS10260 c8eeba7d3767dc40affada6f8b5c0d18 64 Pfam PF10387 Protein of unknown function (DUF2442) 4 62 6.1E-18 T 19-04-2016 IPR018841 Protein of unknown function DUF2442 APA12_RS13360 7fe0f7e4b18b0a5d523bd0b75ec97b7a 100 Pfam PF04380 Membrane fusogenic activity 3 78 1.9E-23 T 19-04-2016 IPR007475 Membrane fusogenic activity APA12_RS11545 ead443e72c07f2dfd1266f0dfad3d1d6 647 Pfam PF06048 Domain of unknown function (DUF927) 66 340 8.2E-84 T 19-04-2016 IPR009270 Domain of unknown function DUF927 APA12_RS00955 236a38e01aec1eb3c2e3fea85ff7136d 64 Pfam PF07869 Protein of unknown function (DUF1656) 4 59 2.3E-17 T 19-04-2016 IPR012451 Protein of unknown function DUF1656 APA12_RS13345 70925edd90b8331d0e0137b01f521ecb 250 Pfam PF10014 2OG-Fe dioxygenase 52 246 9.2E-68 T 19-04-2016 IPR018724 2OG-Fe dioxygenase APA12_RS11040 65c8373140dd3491462e0b0c0fafae22 115 Pfam PF06305 Protein of unknown function (DUF1049) 21 82 3.7E-8 T 19-04-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 APA12_RS05535 eabee87bb125d8e6082f0cedcfb463fd 109 Pfam PF04977 Septum formation initiator 23 102 2.2E-9 T 19-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 APA12_RS09515 68445b614fb863db953bb0d25d5c22d2 200 Gene3D G3DSA:3.40.1360.10 3 98 1.2E-4 T 19-04-2016 APA12_RS05875 1f68645020e81ced2ddab188c793af12 113 Pfam PF11011 Protein of unknown function (DUF2849) 14 99 5.0E-28 T 19-04-2016 IPR021270 Protein of unknown function DUF2849 APA12_RS12195 ae598b6c3818c83156521c2e5e15cb0f 166 Pfam PF10074 Uncharacterized conserved protein (DUF2285) 51 153 8.7E-31 T 19-04-2016 IPR018754 Protein of unknown function DUF2285 APA12_RS07395 6b5c81981893d7295c446ceb45b3ab14 498 Pfam PF07642 Putative beta-barrel porin-2, OmpL-like. bbp2 103 475 4.6E-40 T 19-04-2016 IPR011486 Putative beta-barrel porin-2, OmpL-like. bbp2 APA12_RS08625 38dbef5fb97ed62169d93b63c0b519e4 233 Pfam PF02620 Uncharacterized ACR, COG1399 113 229 7.1E-16 T 19-04-2016 IPR003772 Protein of unknown function DUF177