APA22_RS00045	SM00464	Found in ATP-dependent protease La (LON)
APA22_RS00075	SM00932	Scaffold protein Nfu/NifU N terminal
APA22_RS00095	SM01209	APA22_RS00095
APA22_RS00095	SM01210	APA22_RS00095
APA22_RS00125	SM00829	Enoylreductase
APA22_RS00140	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
APA22_RS00140	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
APA22_RS00145	SM00859	Semialdehyde dehydrogenase, NAD binding domain
APA22_RS00185	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
APA22_RS00190	SM00861	Transketolase, pyrimidine binding domain
APA22_RS00215	SM00382	ATPases associated with a variety of cellular activities
APA22_RS00255	SM00382	ATPases associated with a variety of cellular activities
APA22_RS00265	SM00493	APA22_RS00265
APA22_RS00275	SM00905	Dihydroneopterin aldolase
APA22_RS00295	SM00316	Ribosomal protein S1-like RNA-binding domain
APA22_RS00330	SM00937	APA22_RS00330
APA22_RS00385	SM00917	LeuA allosteric (dimerisation) domain
APA22_RS00405	SM00387	Histidine kinase-like ATPases
APA22_RS00405	SM00388	His Kinase A (phosphoacceptor) domain
APA22_RS00405	SM00448	cheY-homologous receiver domain
APA22_RS00425	SM00986	Uracil DNA glycosylase superfamily
APA22_RS00425	SM00987	UreE urease accessory protein, C-terminal domain 
APA22_RS00435	SM00564	beta-propeller repeat
APA22_RS00485	SM00490	helicase superfamily c-terminal domain
APA22_RS00495	SM00347	helix_turn_helix multiple antibiotic resistance protein
APA22_RS00540	SM00490	helicase superfamily c-terminal domain
APA22_RS00560	SM00919	Malic enzyme, NAD binding domain
APA22_RS00560	SM01274	APA22_RS00560
APA22_RS00565	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
APA22_RS00565	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
APA22_RS00605	SM00382	ATPases associated with a variety of cellular activities
APA22_RS00620	SM00341	Helicase and RNase D C-terminal
APA22_RS00620	SM00474	3'-5' exonuclease
APA22_RS00645	SM00382	ATPases associated with a variety of cellular activities
APA22_RS00685	SM00342	helix_turn_helix, arabinose operon control protein
APA22_RS00720	SM00357	Cold shock protein domain
APA22_RS00780	SM00421	helix_turn_helix, Lux Regulon
APA22_RS00780	SM00448	cheY-homologous receiver domain
APA22_RS00785	SM00387	Histidine kinase-like ATPases
APA22_RS00785	SM00388	His Kinase A (phosphoacceptor) domain
APA22_RS00785	SM00448	cheY-homologous receiver domain
APA22_RS00805	SM00382	ATPases associated with a variety of cellular activities
APA22_RS00810	SM00382	ATPases associated with a variety of cellular activities
APA22_RS00870	SM00331	Sigma factor PP2C-like phosphatases
APA22_RS00870	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
APA22_RS00875	SM00220	Serine/Threonine protein kinases, catalytic domain
APA22_RS00880	SM00220	Serine/Threonine protein kinases, catalytic domain
APA22_RS00950	SM00347	helix_turn_helix multiple antibiotic resistance protein
APA22_RS01020	SM00028	Tetratricopeptide repeats
APA22_RS01050	SM00867	YceI-like domain 
APA22_RS01070	SM00382	ATPases associated with a variety of cellular activities
APA22_RS01090	SM00271	DnaJ molecular chaperone homology domain
APA22_RS01210	SM00487	DEAD-like helicases superfamily
APA22_RS01210	SM00490	helicase superfamily c-terminal domain
APA22_RS01310	SM01133	APA22_RS01310
APA22_RS01320	SM01040	BRO family, N-terminal domain
APA22_RS01415	SM00382	ATPases associated with a variety of cellular activities
APA22_RS01415	SM01086	C-terminal, D2-small domain, of ClpB protein
APA22_RS01445	SM00387	Histidine kinase-like ATPases
APA22_RS01445	SM00388	His Kinase A (phosphoacceptor) domain
APA22_RS01450	SM00448	cheY-homologous receiver domain
APA22_RS01450	SM00862	Transcriptional regulatory protein, C terminal
APA22_RS01465	SM00271	DnaJ molecular chaperone homology domain
APA22_RS01485	SM00798	AICARFT/IMPCHase bienzyme
APA22_RS01485	SM00851	MGS-like domain
APA22_RS01525	SM00530	Helix-turn-helix XRE-family like proteins 
APA22_RS01550	SM00357	Cold shock protein domain
APA22_RS01550	SM00382	ATPases associated with a variety of cellular activities
APA22_RS01550	SM00959	Rho termination factor, N-terminal domain
APA22_RS01585	SM00382	ATPases associated with a variety of cellular activities
APA22_RS01595	SM00788	Adenylosuccinate synthetase
APA22_RS01600	SM00448	cheY-homologous receiver domain
APA22_RS01600	SM00862	Transcriptional regulatory protein, C terminal
APA22_RS01605	SM00387	Histidine kinase-like ATPases
APA22_RS01605	SM00388	His Kinase A (phosphoacceptor) domain
APA22_RS01635	SM01091	Transporter associated domain
APA22_RS01640	SM00829	Enoylreductase
APA22_RS01645	SM00382	ATPases associated with a variety of cellular activities
APA22_RS01665	SM00822	APA22_RS01665
APA22_RS01670	SM00859	Semialdehyde dehydrogenase, NAD binding domain
APA22_RS01785	SM00477	DNA/RNA non-specific endonuclease
APA22_RS01785	SM00892	DNA/RNA non-specific endonuclease
APA22_RS01800	SM00530	Helix-turn-helix XRE-family like proteins 
APA22_RS01900	SM00450	Rhodanese Homology Domain
APA22_RS01975	SM00729	Elongator protein 3, MiaB family, Radical SAM
APA22_RS01990	SM00861	Transketolase, pyrimidine binding domain
APA22_RS02005	SM01091	Transporter associated domain
APA22_RS02015	SM00986	Uracil DNA glycosylase superfamily
APA22_RS02015	SM00987	UreE urease accessory protein, C-terminal domain 
APA22_RS02020	SM00028	Tetratricopeptide repeats
APA22_RS02060	SM00382	ATPases associated with a variety of cellular activities
APA22_RS02070	SM01400	APA22_RS02070
APA22_RS02075	SM00855	Phosphoglycerate mutase family
APA22_RS02110	SM00822	APA22_RS02110
APA22_RS02145	SM00382	ATPases associated with a variety of cellular activities
APA22_RS02195	SM00421	helix_turn_helix, Lux Regulon
APA22_RS02340	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
APA22_RS02455	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
APA22_RS02470	SM00974	APA22_RS02470
APA22_RS02545	SM00530	Helix-turn-helix XRE-family like proteins 
APA22_RS02575	SM00857	Resolvase, N terminal domain
APA22_RS02585	SM00729	Elongator protein 3, MiaB family, Radical SAM
APA22_RS02620	SM00450	Rhodanese Homology Domain
APA22_RS02790	SM00822	APA22_RS02790
APA22_RS02845	SM00882	Coenzyme A transferase
APA22_RS02900	SM00893	Electron transfer flavoprotein domain
APA22_RS02930	SM00893	Electron transfer flavoprotein domain
APA22_RS03005	SM00861	Transketolase, pyrimidine binding domain
APA22_RS03035	SM00320	WD40 repeats
APA22_RS03040	SM00833	Cobalamin synthesis protein cobW C-terminal domain
APA22_RS03160	SM01329	APA22_RS03160
APA22_RS03185	SM00938	Nitrogen regulatory protein P-II
APA22_RS03190	SM01230	APA22_RS03190
APA22_RS03200	SM00564	beta-propeller repeat
APA22_RS03215	SM00838	Elongation factor G C-terminus
APA22_RS03230	SM00487	DEAD-like helicases superfamily
APA22_RS03230	SM00490	helicase superfamily c-terminal domain
APA22_RS03240	SM00947	Carbonic anhydrase
APA22_RS03255	SM01409	APA22_RS03255
APA22_RS03260	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
APA22_RS03260	SM00954	Region found in RelA / SpoT proteins
APA22_RS03275	SM00358	Double-stranded RNA binding motif
APA22_RS03275	SM00535	Ribonuclease III family
APA22_RS03310	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
APA22_RS03320	SM00935	Outer membrane protein (OmpH-like)
APA22_RS03435	SM00382	ATPases associated with a variety of cellular activities
APA22_RS03450	SM00116	Domain in cystathionine beta-synthase and other proteins.
APA22_RS03455	SM00474	3'-5' exonuclease
APA22_RS03460	SM00967	RNA 2'-O ribose methyltransferase substrate binding
APA22_RS03475	SM00072	Guanylate kinase homologues.
APA22_RS03505	SM00382	ATPases associated with a variety of cellular activities
APA22_RS03520	SM00382	ATPases associated with a variety of cellular activities
APA22_RS03560	SM00345	helix_turn_helix gluconate operon transcriptional repressor
APA22_RS03560	SM00895	APA22_RS03560
APA22_RS03650	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
APA22_RS03655	SM00487	DEAD-like helicases superfamily
APA22_RS03655	SM00490	helicase superfamily c-terminal domain
APA22_RS03655	SM00847	Helicase associated domain (HA2)  Add an annotation
APA22_RS03700	SM01007	Class II Aldolase and Adducin N-terminal domain
APA22_RS03715	SM00904	Riboflavin kinase
APA22_RS03735	SM00853	MutL C terminal dimerisation domain
APA22_RS03735	SM01340	APA22_RS03735
APA22_RS03750	SM00387	Histidine kinase-like ATPases
APA22_RS03750	SM00433	TopoisomeraseII
APA22_RS03785	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
APA22_RS03785	SM00245	tail specific protease
APA22_RS03790	SM00955	APA22_RS03790
APA22_RS03795	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
APA22_RS03795	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
APA22_RS03795	SM00493	APA22_RS03795
APA22_RS03825	SM01207	APA22_RS03825
APA22_RS03860	SM00861	Transketolase, pyrimidine binding domain
APA22_RS03885	SM00996	S-adenosyl-L-homocysteine hydrolase
APA22_RS03885	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
APA22_RS03890	SM00563	Phosphate acyltransferases
APA22_RS03900	SM00849	Metallo-beta-lactamase superfamily
APA22_RS03950	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
APA22_RS03985	SM00852	Probable molybdopterin binding domain
APA22_RS04035	SM00978	APA22_RS04035
APA22_RS04045	SM01235	APA22_RS04045
APA22_RS04050	SM00463	Small MutS-related domain
APA22_RS04155	SM00857	Resolvase, N terminal domain
APA22_RS04230	SM00954	Region found in RelA / SpoT proteins
APA22_RS04305	SM00717	SANT  SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
APA22_RS04350	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
APA22_RS04355	SM00829	Enoylreductase
APA22_RS04405	SM00479	APA22_RS04405
APA22_RS04460	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
APA22_RS04630	SM00448	cheY-homologous receiver domain
APA22_RS04630	SM00862	Transcriptional regulatory protein, C terminal
APA22_RS04635	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
APA22_RS04635	SM00387	Histidine kinase-like ATPases
APA22_RS04635	SM00388	His Kinase A (phosphoacceptor) domain
APA22_RS04655	SM00649	Ribosomal protein L11/L12
APA22_RS04680	SM00663	RNA polymerase I subunit A N-terminus
APA22_RS04700	SM01403	APA22_RS04700
APA22_RS04720	SM01382	APA22_RS04720
APA22_RS04720	SM01383	APA22_RS04720
APA22_RS04735	SM00322	K homology RNA-binding domain
APA22_RS04755	SM01374	APA22_RS04755
APA22_RS04760	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
APA22_RS04825	SM00662	RNA polymerases D
APA22_RS04845	SM00382	ATPases associated with a variety of cellular activities
APA22_RS04920	SM00382	ATPases associated with a variety of cellular activities
APA22_RS04935	SM00382	ATPases associated with a variety of cellular activities
APA22_RS04960	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
APA22_RS04960	SM00245	tail specific protease
APA22_RS04985	SM00851	MGS-like domain
APA22_RS04985	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
APA22_RS04990	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
APA22_RS05000	SM00400	zinc finger
APA22_RS05000	SM00493	APA22_RS05000
APA22_RS05035	SM00650	Ribosomal RNA adenine dimethylases
APA22_RS05065	SM00382	ATPases associated with a variety of cellular activities
APA22_RS05070	SM00345	helix_turn_helix gluconate operon transcriptional repressor
APA22_RS05070	SM00895	APA22_RS05070
APA22_RS05110	SM00028	Tetratricopeptide repeats
APA22_RS05115	SM01058	CarD-like/TRCF domain
APA22_RS05140	SM00382	ATPases associated with a variety of cellular activities
APA22_RS05165	SM00387	Histidine kinase-like ATPases
APA22_RS05170	SM00091	PAS domain
APA22_RS05170	SM00387	Histidine kinase-like ATPases
APA22_RS05170	SM00388	His Kinase A (phosphoacceptor) domain
APA22_RS05170	SM00448	cheY-homologous receiver domain
APA22_RS05180	SM00382	ATPases associated with a variety of cellular activities
APA22_RS05180	SM01086	C-terminal, D2-small domain, of ClpB protein
APA22_RS05190	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
APA22_RS05225	SM00873	B3/4 domain
APA22_RS05225	SM00874	tRNA synthetase B5 domain
APA22_RS05225	SM00896	Ferredoxin-fold anticodon binding domain
APA22_RS05245	SM00100	Cyclic nucleotide-monophosphate binding domain
APA22_RS05255	SM00363	S4 RNA-binding domain
APA22_RS05255	SM01390	APA22_RS05255
APA22_RS05270	SM01329	APA22_RS05270
APA22_RS05305	SM01001	AIR carboxylase
APA22_RS05400	SM00855	Phosphoglycerate mutase family
APA22_RS05405	SM00830	Chorismate mutase type II
APA22_RS05425	SM00968	SMC proteins Flexible Hinge Domain
APA22_RS05435	SM00116	Domain in cystathionine beta-synthase and other proteins.
APA22_RS05435	SM01091	Transporter associated domain
APA22_RS05450	SM00729	Elongator protein 3, MiaB family, Radical SAM
APA22_RS05455	SM00563	Phosphate acyltransferases
APA22_RS05480	SM00278	Helix-hairpin-helix DNA-binding motif class 1
APA22_RS05480	SM00465	GIY-YIG type nucleases (URI domain)
APA22_RS05530	SM00852	Probable molybdopterin binding domain
APA22_RS05545	SM01192	APA22_RS05545
APA22_RS05545	SM01193	APA22_RS05545
APA22_RS05575	SM00487	DEAD-like helicases superfamily
APA22_RS05575	SM00490	helicase superfamily c-terminal domain
APA22_RS05585	SM00487	DEAD-like helicases superfamily
APA22_RS05585	SM00490	helicase superfamily c-terminal domain
APA22_RS05585	SM00982	APA22_RS05585
APA22_RS05585	SM01058	CarD-like/TRCF domain
APA22_RS05610	SM00327	von Willebrand factor (vWF) type A domain
APA22_RS05620	SM00271	DnaJ molecular chaperone homology domain
APA22_RS05655	SM00729	Elongator protein 3, MiaB family, Radical SAM
APA22_RS05705	SM00530	Helix-turn-helix XRE-family like proteins 
APA22_RS05720	SM00937	APA22_RS05720
APA22_RS05780	SM00936	Penicillin-binding protein 5, C-terminal domain 
APA22_RS05805	SM00849	Metallo-beta-lactamase superfamily
APA22_RS05855	SM00729	Elongator protein 3, MiaB family, Radical SAM
APA22_RS05855	SM00876	Biotin and Thiamin Synthesis associated domain
APA22_RS05925	SM00825	Beta-ketoacyl synthase
APA22_RS05935	SM00822	APA22_RS05935
APA22_RS05940	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
APA22_RS05965	SM00857	Resolvase, N terminal domain
APA22_RS05985	SM00357	Cold shock protein domain
APA22_RS05995	SM01130	APA22_RS05995
APA22_RS06025	SM00382	ATPases associated with a variety of cellular activities
APA22_RS06035	SM00450	Rhodanese Homology Domain
APA22_RS06050	SM00155	Phospholipase D. Active site motifs.
APA22_RS06080	SM01211	APA22_RS06080
APA22_RS06100	SM00998	Adenylosuccinate lyase C-terminus
APA22_RS06135	SM00729	Elongator protein 3, MiaB family, Radical SAM
APA22_RS06150	SM00861	Transketolase, pyrimidine binding domain
APA22_RS06210	SM00387	Histidine kinase-like ATPases
APA22_RS06210	SM00433	TopoisomeraseII
APA22_RS06220	SM00480	DNA polymerase III beta subunit
APA22_RS06225	SM00382	ATPases associated with a variety of cellular activities
APA22_RS06225	SM00760	Bacterial dnaA protein helix-turn-helix domain
APA22_RS06235	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
APA22_RS06235	SM01232	APA22_RS06235
APA22_RS06260	SM00382	ATPases associated with a variety of cellular activities
APA22_RS06310	SM00822	APA22_RS06310
APA22_RS06355	SM00420	helix_turn_helix, Deoxyribose operon repressor
APA22_RS06355	SM01134	APA22_RS06355
APA22_RS06360	SM00341	Helicase and RNase D C-terminal
APA22_RS06360	SM00487	DEAD-like helicases superfamily
APA22_RS06360	SM00490	helicase superfamily c-terminal domain
APA22_RS06360	SM00956	APA22_RS06360
APA22_RS06370	SM00382	ATPases associated with a variety of cellular activities
APA22_RS06375	SM00382	ATPases associated with a variety of cellular activities
APA22_RS06380	SM00387	Histidine kinase-like ATPases
APA22_RS06400	SM00448	cheY-homologous receiver domain
APA22_RS06405	SM00382	ATPases associated with a variety of cellular activities
APA22_RS06415	SM00829	Enoylreductase
APA22_RS06455	SM00382	ATPases associated with a variety of cellular activities
APA22_RS06510	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
APA22_RS06515	SM01092	CO dehydrogenase flavoprotein C-terminal domain
APA22_RS06590	SM00382	ATPases associated with a variety of cellular activities
APA22_RS06660	SM01060	APA22_RS06660
APA22_RS06715	SM00382	ATPases associated with a variety of cellular activities
APA22_RS06795	SM00342	helix_turn_helix, arabinose operon control protein
APA22_RS06865	SM00965	Secretin and TonB N terminus short domain
APA22_RS06880	SM00965	Secretin and TonB N terminus short domain
APA22_RS06900	SM00062	Bacterial periplasmic substrate-binding proteins
APA22_RS06905	SM00382	ATPases associated with a variety of cellular activities
APA22_RS07040	SM00382	ATPases associated with a variety of cellular activities
APA22_RS07060	SM00796	Allophanate hydrolase subunit 1
APA22_RS07060	SM00797	Allophanate hydrolase subunit 2
APA22_RS07060	SM00878	Biotin carboxylase C-terminal domain
APA22_RS07140	SM00903	Flavin reductase like domain
APA22_RS07210	SM00487	DEAD-like helicases superfamily
APA22_RS07370	SM00886	Stress responsive A/B Barrel Domain
APA22_RS07395	SM00564	beta-propeller repeat
APA22_RS07450	SM00890	Domain of unknown function
APA22_RS07495	SM00852	Probable molybdopterin binding domain
APA22_RS07555	SM00861	Transketolase, pyrimidine binding domain
APA22_RS07560	SM00363	S4 RNA-binding domain
APA22_RS07605	SM00448	cheY-homologous receiver domain
APA22_RS07605	SM00862	Transcriptional regulatory protein, C terminal
APA22_RS07625	SM00116	Domain in cystathionine beta-synthase and other proteins.
APA22_RS07625	SM01240	APA22_RS07625
APA22_RS07645	SM00382	ATPases associated with a variety of cellular activities
APA22_RS07650	SM00382	ATPases associated with a variety of cellular activities
APA22_RS07660	SM00014	Acid phosphatase homologues
APA22_RS07740	SM00729	Elongator protein 3, MiaB family, Radical SAM
APA22_RS07785	SM00382	ATPases associated with a variety of cellular activities
APA22_RS07790	SM00382	ATPases associated with a variety of cellular activities
APA22_RS07800	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
APA22_RS07810	SM00671	Sel1-like repeats.
APA22_RS07825	SM00870	APA22_RS07825
APA22_RS07870	SM00382	ATPases associated with a variety of cellular activities
APA22_RS07895	SM00829	Enoylreductase
APA22_RS07995	SM01266	APA22_RS07995
APA22_RS08040	SM00387	Histidine kinase-like ATPases
APA22_RS08040	SM00388	His Kinase A (phosphoacceptor) domain
APA22_RS08045	SM00448	cheY-homologous receiver domain
APA22_RS08045	SM00862	Transcriptional regulatory protein, C terminal
APA22_RS08220	SM00346	helix_turn_helix isocitrate lyase regulation
APA22_RS08230	SM00382	ATPases associated with a variety of cellular activities
APA22_RS08245	SM00849	Metallo-beta-lactamase superfamily
APA22_RS08290	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
APA22_RS08295	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
APA22_RS08340	SM00411	bacterial (prokaryotic) histone like domain
APA22_RS08345	SM00382	ATPases associated with a variety of cellular activities
APA22_RS08345	SM00464	Found in ATP-dependent protease La (LON)
APA22_RS08350	SM00382	ATPases associated with a variety of cellular activities
APA22_RS08350	SM00994	ClpX C4-type zinc finger
APA22_RS08350	SM01086	C-terminal, D2-small domain, of ClpB protein
APA22_RS08385	SM00487	DEAD-like helicases superfamily
APA22_RS08385	SM00490	helicase superfamily c-terminal domain
APA22_RS08420	SM00382	ATPases associated with a variety of cellular activities
APA22_RS08450	SM00838	Elongation factor G C-terminus
APA22_RS08450	SM00889	Elongation factor G, domain IV
APA22_RS08465	SM00382	ATPases associated with a variety of cellular activities
APA22_RS08475	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
APA22_RS08480	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
APA22_RS08480	SM00534	ATPase domain of DNA mismatch repair MUTS family
APA22_RS08485	SM00028	Tetratricopeptide repeats
APA22_RS08515	SM00978	APA22_RS08515
APA22_RS08555	SM00344	helix_turn_helix ASNC type
APA22_RS08575	SM00411	bacterial (prokaryotic) histone like domain
APA22_RS08580	SM00986	Uracil DNA glycosylase superfamily
APA22_RS08580	SM00987	UreE urease accessory protein, C-terminal domain 
APA22_RS08600	SM00422	helix_turn_helix, mercury resistance
APA22_RS08605	SM00411	bacterial (prokaryotic) histone like domain
APA22_RS08635	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
APA22_RS08635	SM00387	Histidine kinase-like ATPases
APA22_RS08635	SM00388	His Kinase A (phosphoacceptor) domain
APA22_RS08640	SM00448	cheY-homologous receiver domain
APA22_RS08640	SM00862	Transcriptional regulatory protein, C terminal
APA22_RS08645	SM00347	helix_turn_helix multiple antibiotic resistance protein
APA22_RS08665	SM01329	APA22_RS08665
APA22_RS08700	SM00382	ATPases associated with a variety of cellular activities
APA22_RS08700	SM00962	SRP54-type protein, GTPase domain
APA22_RS08700	SM00963	SRP54-type protein, helical bundle domain
APA22_RS08720	SM00363	S4 RNA-binding domain
APA22_RS08725	SM00382	ATPases associated with a variety of cellular activities
APA22_RS08755	SM00382	ATPases associated with a variety of cellular activities
APA22_RS08760	SM00564	beta-propeller repeat
APA22_RS08830	SM00382	ATPases associated with a variety of cellular activities
APA22_RS08830	SM01086	C-terminal, D2-small domain, of ClpB protein
APA22_RS08850	SM00382	ATPases associated with a variety of cellular activities
APA22_RS08850	SM00448	cheY-homologous receiver domain
APA22_RS08855	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
APA22_RS08855	SM00387	Histidine kinase-like ATPases
APA22_RS08855	SM00388	His Kinase A (phosphoacceptor) domain
APA22_RS08860	SM00382	ATPases associated with a variety of cellular activities
APA22_RS08860	SM00448	cheY-homologous receiver domain
APA22_RS08865	SM00091	PAS domain
APA22_RS08865	SM00387	Histidine kinase-like ATPases
APA22_RS08865	SM00388	His Kinase A (phosphoacceptor) domain
APA22_RS08945	SM00984	UDP binding domain
APA22_RS08955	SM00938	Nitrogen regulatory protein P-II
APA22_RS08960	SM00971	Serine acetyltransferase, N-terminal
APA22_RS09020	SM00841	Elongation factor P, C-terminal
APA22_RS09020	SM01185	APA22_RS09020
APA22_RS09030	SM00491	APA22_RS09030
APA22_RS09035	SM00357	Cold shock protein domain
APA22_RS09045	SM00883	Chaperonin 10 Kd subunit
APA22_RS09250	SM00607	eel-Fucolectin Tachylectin-4 Pentaxrin-1 Domain
APA22_RS09280	SM00487	DEAD-like helicases superfamily
APA22_RS09280	SM00490	helicase superfamily c-terminal domain
APA22_RS09285	SM01323	APA22_RS09285
APA22_RS09335	SM00852	Probable molybdopterin binding domain
APA22_RS09500	SM00487	DEAD-like helicases superfamily
APA22_RS09500	SM00490	helicase superfamily c-terminal domain
APA22_RS09565	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
APA22_RS09665	SM00842	Cell division protein FtsA
APA22_RS09670	SM00864	Tubulin/FtsZ family, GTPase domain
APA22_RS09670	SM00865	Tubulin/FtsZ family, C-terminal domain
APA22_RS09690	SM00292	breast cancer carboxy-terminal domain
APA22_RS09690	SM00532	Ligase N family
APA22_RS09810	SM00487	DEAD-like helicases superfamily
APA22_RS09810	SM00490	helicase superfamily c-terminal domain
APA22_RS09840	SM01004	Delta-aminolevulinic acid dehydratase
APA22_RS09850	SM00434	DNA Topoisomerase IV
APA22_RS09895	SM00481	DNA polymerase alpha chain like domain
APA22_RS09935	SM00507	HNH nucleases
APA22_RS09955	SM00729	Elongator protein 3, MiaB family, Radical SAM
APA22_RS09960	SM00562	APA22_RS09960
APA22_RS09965	SM00382	ATPases associated with a variety of cellular activities
APA22_RS09975	SM00448	cheY-homologous receiver domain
APA22_RS09975	SM00862	Transcriptional regulatory protein, C terminal
APA22_RS09980	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
APA22_RS09980	SM00387	Histidine kinase-like ATPases
APA22_RS09995	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
APA22_RS10005	SM00028	Tetratricopeptide repeats
APA22_RS10085	SM00646	APA22_RS10085
APA22_RS10090	SM00316	Ribosomal protein S1-like RNA-binding domain
APA22_RS10105	SM00316	Ribosomal protein S1-like RNA-binding domain
APA22_RS10240	SM00507	HNH nucleases
APA22_RS10285	SM01040	BRO family, N-terminal domain
APA22_RS10320	SM00479	APA22_RS10320
APA22_RS10410	SM00460	Transglutaminase/protease-like homologues
APA22_RS10520	SM00797	Allophanate hydrolase subunit 2
APA22_RS10525	SM00796	Allophanate hydrolase subunit 1
APA22_RS10540	SM00878	Biotin carboxylase C-terminal domain
APA22_RS10570	SM00642	Alpha-amylase domain
APA22_RS10575	SM00642	Alpha-amylase domain
APA22_RS10580	SM00642	Alpha-amylase domain
APA22_RS10590	SM00642	Alpha-amylase domain
APA22_RS10760	SM00836	DALR anticodon binding domain
APA22_RS10760	SM01016	Arginyl tRNA synthetase N terminal dom
APA22_RS10765	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
APA22_RS10810	SM00729	Elongator protein 3, MiaB family, Radical SAM
APA22_RS10855	SM00363	S4 RNA-binding domain
APA22_RS10865	SM00382	ATPases associated with a variety of cellular activities
APA22_RS10885	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
APA22_RS10885	SM00474	3'-5' exonuclease
APA22_RS10885	SM00475	5'-3' exonuclease
APA22_RS10885	SM00482	DNA polymerase A domain
APA22_RS10895	SM00563	Phosphate acyltransferases
APA22_RS10945	SM00564	beta-propeller repeat
APA22_RS10965	SM00345	helix_turn_helix gluconate operon transcriptional repressor
APA22_RS11005	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
APA22_RS11035	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
APA22_RS11105	SM00530	Helix-turn-helix XRE-family like proteins 
APA22_RS11120	SM00382	ATPases associated with a variety of cellular activities
APA22_RS11150	SM00347	helix_turn_helix multiple antibiotic resistance protein
APA22_RS11160	SM00903	Flavin reductase like domain
APA22_RS11165	SM01007	Class II Aldolase and Adducin N-terminal domain
APA22_RS11180	SM00822	APA22_RS11180
APA22_RS11215	SM00564	beta-propeller repeat
APA22_RS11265	SM00382	ATPases associated with a variety of cellular activities
APA22_RS11290	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
APA22_RS11300	SM00671	Sel1-like repeats.
APA22_RS11415	SM00855	Phosphoglycerate mutase family
APA22_RS11430	SM00833	Cobalamin synthesis protein cobW C-terminal domain
APA22_RS11445	SM00347	helix_turn_helix multiple antibiotic resistance protein
APA22_RS11465	SM00903	Flavin reductase like domain
APA22_RS11475	SM00382	ATPases associated with a variety of cellular activities
APA22_RS11540	SM00857	Resolvase, N terminal domain
APA22_RS11700	SM00382	ATPases associated with a variety of cellular activities
APA22_RS11725	SM00248	ankyrin repeats
APA22_RS11730	SM00861	Transketolase, pyrimidine binding domain
APA22_RS11740	SM01350	APA22_RS11740
APA22_RS11785	SM00829	Enoylreductase
APA22_RS11800	SM00729	Elongator protein 3, MiaB family, Radical SAM
APA22_RS11820	SM00382	ATPases associated with a variety of cellular activities
APA22_RS11845	SM00387	Histidine kinase-like ATPases
APA22_RS11845	SM00388	His Kinase A (phosphoacceptor) domain
APA22_RS11845	SM00448	cheY-homologous receiver domain
APA22_RS11850	SM00421	helix_turn_helix, Lux Regulon
APA22_RS11850	SM00448	cheY-homologous receiver domain
APA22_RS11900	SM00988	UreE urease accessory protein, N-terminal domain
APA22_RS11970	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
APA22_RS11980	SM00849	Metallo-beta-lactamase superfamily
APA22_RS12070	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
APA22_RS12085	SM00347	helix_turn_helix multiple antibiotic resistance protein
APA22_RS12105	SM00382	ATPases associated with a variety of cellular activities
APA22_RS12155	SM00857	Resolvase, N terminal domain
APA22_RS12160	SM00530	Helix-turn-helix XRE-family like proteins 
APA22_RS12275	SM00849	Metallo-beta-lactamase superfamily
APA22_RS12355	SM00434	DNA Topoisomerase IV
APA22_RS12370	SM00316	Ribosomal protein S1-like RNA-binding domain
APA22_RS12370	SM00322	K homology RNA-binding domain
APA22_RS12375	SM01387	APA22_RS12375
APA22_RS12390	SM00382	ATPases associated with a variety of cellular activities
APA22_RS12420	SM00671	Sel1-like repeats.
APA22_RS12430	SM00382	ATPases associated with a variety of cellular activities
APA22_RS12440	SM01018	B12 binding domain
APA22_RS12515	SM00382	ATPases associated with a variety of cellular activities
APA22_RS12515	SM00962	SRP54-type protein, GTPase domain
APA22_RS12515	SM00963	SRP54-type protein, helical bundle domain
APA22_RS12520	SM00729	Elongator protein 3, MiaB family, Radical SAM
APA22_RS12540	SM00487	DEAD-like helicases superfamily
APA22_RS12540	SM00490	helicase superfamily c-terminal domain
APA22_RS12580	SM00382	ATPases associated with a variety of cellular activities
APA22_RS12605	SM00829	Enoylreductase
APA22_RS12615	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
APA22_RS12675	SM01005	Alanine racemase, C-terminal domain
APA22_RS12680	SM00344	helix_turn_helix ASNC type
APA22_RS12700	SM00316	Ribosomal protein S1-like RNA-binding domain
APA22_RS12700	SM00322	K homology RNA-binding domain
APA22_RS12715	SM00382	ATPases associated with a variety of cellular activities
APA22_RS12730	SM00062	Bacterial periplasmic substrate-binding proteins
APA22_RS12730	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
APA22_RS12735	SM00382	ATPases associated with a variety of cellular activities
APA22_RS12745	SM00382	ATPases associated with a variety of cellular activities
APA22_RS12785	SM00878	Biotin carboxylase C-terminal domain
APA22_RS12855	SM00732	Likely ribonuclease with RNase H fold.
APA22_RS12870	SM00845	GatB domain
APA22_RS12880	SM00382	ATPases associated with a variety of cellular activities
APA22_RS12885	SM00478	endonuclease III
APA22_RS12895	SM00478	endonuclease III
APA22_RS12975	SM00893	Electron transfer flavoprotein domain
APA22_RS12980	SM00893	Electron transfer flavoprotein domain
APA22_RS12995	SM00729	Elongator protein 3, MiaB family, Radical SAM
APA22_RS13005	SM00100	Cyclic nucleotide-monophosphate binding domain
APA22_RS13005	SM00419	helix_turn_helix, cAMP Regulatory protein
APA22_RS13010	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
APA22_RS13025	SM00363	S4 RNA-binding domain
APA22_RS13065	SM00857	Resolvase, N terminal domain
APA22_RS13115	SM00855	Phosphoglycerate mutase family
APA22_RS13150	SM00382	ATPases associated with a variety of cellular activities
APA22_RS13150	SM00843	APA22_RS13150
APA22_RS13200	SM00840	APA22_RS13200
APA22_RS13240	SM00448	cheY-homologous receiver domain
APA22_RS13240	SM00862	Transcriptional regulatory protein, C terminal
APA22_RS13255	SM00382	ATPases associated with a variety of cellular activities
APA22_RS13300	SM00382	ATPases associated with a variety of cellular activities
APA22_RS13305	SM00278	Helix-hairpin-helix DNA-binding motif class 1
APA22_RS13320	SM00957	SecA DEAD-like domain
APA22_RS13320	SM00958	SecA preprotein cross-linking domain
APA22_RS13355	SM00271	DnaJ molecular chaperone homology domain
APA22_RS13390	SM00411	bacterial (prokaryotic) histone like domain
APA22_RS13485	SM00470	ParB-like nuclease domain
APA22_RS13500	SM01228	APA22_RS13500
APA22_RS13605	SM00857	Resolvase, N terminal domain
APA22_RS13610	SM00885	D5 N terminal like
APA22_RS13615	SM00943	Bifunctional DNA primase/polymerase, N-terminal
APA22_RS15010	SM00564	beta-propeller repeat
APA22_RS15365	SM00387	Histidine kinase-like ATPases
APA22_RS15365	SM00388	His Kinase A (phosphoacceptor) domain
APA22_RS15365	SM00448	cheY-homologous receiver domain
APA22_RS15585	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
APA22_RS15765	SM00530	Helix-turn-helix XRE-family like proteins 
