S1001342_RS00005	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
S1001342_RS00010	SM00480	DNA polymerase III beta subunit
S1001342_RS00020	SM00387	Histidine kinase-like ATPases
S1001342_RS00020	SM00433	TopoisomeraseII
S1001342_RS00080	SM00861	Transketolase, pyrimidine binding domain
S1001342_RS00095	SM00729	Elongator protein 3, MiaB family, Radical SAM
S1001342_RS00130	SM00998	Adenylosuccinate lyase C-terminus
S1001342_RS00150	SM01211	S1001342_RS00150
S1001342_RS00180	SM00155	Phospholipase D. Active site motifs.
S1001342_RS00195	SM00450	Rhodanese Homology Domain
S1001342_RS00205	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS00255	SM01130	S1001342_RS00255
S1001342_RS00265	SM00357	Cold shock protein domain
S1001342_RS00300	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
S1001342_RS00305	SM00822	S1001342_RS00305
S1001342_RS00315	SM00825	Beta-ketoacyl synthase
S1001342_RS00385	SM00729	Elongator protein 3, MiaB family, Radical SAM
S1001342_RS00385	SM00876	Biotin and Thiamin Synthesis associated domain
S1001342_RS00435	SM00849	Metallo-beta-lactamase superfamily
S1001342_RS00460	SM00936	Penicillin-binding protein 5, C-terminal domain 
S1001342_RS00525	SM00937	S1001342_RS00525
S1001342_RS00540	SM00530	Helix-turn-helix XRE-family like proteins 
S1001342_RS00590	SM00729	Elongator protein 3, MiaB family, Radical SAM
S1001342_RS00625	SM00271	DnaJ molecular chaperone homology domain
S1001342_RS00635	SM00327	von Willebrand factor (vWF) type A domain
S1001342_RS00655	SM00487	DEAD-like helicases superfamily
S1001342_RS00655	SM00490	helicase superfamily c-terminal domain
S1001342_RS00655	SM00982	S1001342_RS00655
S1001342_RS00655	SM01058	CarD-like/TRCF domain
S1001342_RS00665	SM00487	DEAD-like helicases superfamily
S1001342_RS00665	SM00490	helicase superfamily c-terminal domain
S1001342_RS00695	SM01192	S1001342_RS00695
S1001342_RS00695	SM01193	S1001342_RS00695
S1001342_RS00710	SM00852	Probable molybdopterin binding domain
S1001342_RS00760	SM00278	Helix-hairpin-helix DNA-binding motif class 1
S1001342_RS00760	SM00465	GIY-YIG type nucleases (URI domain)
S1001342_RS00785	SM00563	Phosphate acyltransferases
S1001342_RS00790	SM00729	Elongator protein 3, MiaB family, Radical SAM
S1001342_RS00805	SM00116	Domain in cystathionine beta-synthase and other proteins.
S1001342_RS00805	SM01091	Transporter associated domain
S1001342_RS00815	SM00968	SMC proteins Flexible Hinge Domain
S1001342_RS00835	SM00830	Chorismate mutase type II
S1001342_RS00840	SM00855	Phosphoglycerate mutase family
S1001342_RS00940	SM01001	AIR carboxylase
S1001342_RS00975	SM01329	S1001342_RS00975
S1001342_RS00990	SM00363	S4 RNA-binding domain
S1001342_RS00990	SM01390	S1001342_RS00990
S1001342_RS01000	SM00100	Cyclic nucleotide-monophosphate binding domain
S1001342_RS01025	SM00873	B3/4 domain
S1001342_RS01025	SM00874	tRNA synthetase B5 domain
S1001342_RS01025	SM00896	Ferredoxin-fold anticodon binding domain
S1001342_RS01060	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
S1001342_RS01070	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS01070	SM01086	C-terminal, D2-small domain, of ClpB protein
S1001342_RS01080	SM00091	PAS domain
S1001342_RS01080	SM00387	Histidine kinase-like ATPases
S1001342_RS01080	SM00388	His Kinase A (phosphoacceptor) domain
S1001342_RS01080	SM00448	cheY-homologous receiver domain
S1001342_RS01085	SM00387	Histidine kinase-like ATPases
S1001342_RS01085	SM00388	His Kinase A (phosphoacceptor) domain
S1001342_RS01100	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS01125	SM01058	CarD-like/TRCF domain
S1001342_RS01130	SM00028	Tetratricopeptide repeats
S1001342_RS01170	SM00345	helix_turn_helix gluconate operon transcriptional repressor
S1001342_RS01170	SM00895	S1001342_RS01170
S1001342_RS01175	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS01205	SM00650	Ribosomal RNA adenine dimethylases
S1001342_RS01240	SM00400	zinc finger
S1001342_RS01240	SM00493	S1001342_RS01240
S1001342_RS01250	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
S1001342_RS01255	SM00851	MGS-like domain
S1001342_RS01255	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
S1001342_RS01285	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
S1001342_RS01285	SM00245	tail specific protease
S1001342_RS01310	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS01325	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS01400	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS01420	SM00662	RNA polymerases D
S1001342_RS01485	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
S1001342_RS01490	SM01374	S1001342_RS01490
S1001342_RS01510	SM00322	K homology RNA-binding domain
S1001342_RS01525	SM01382	S1001342_RS01525
S1001342_RS01525	SM01383	S1001342_RS01525
S1001342_RS01545	SM01403	S1001342_RS01545
S1001342_RS01565	SM00663	RNA polymerase I subunit A N-terminus
S1001342_RS01590	SM00649	Ribosomal protein L11/L12
S1001342_RS01610	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
S1001342_RS01610	SM00387	Histidine kinase-like ATPases
S1001342_RS01610	SM00388	His Kinase A (phosphoacceptor) domain
S1001342_RS01615	SM00448	cheY-homologous receiver domain
S1001342_RS01615	SM00862	Transcriptional regulatory protein, C terminal
S1001342_RS01780	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
S1001342_RS01835	SM00479	S1001342_RS01835
S1001342_RS01890	SM00829	Enoylreductase
S1001342_RS01895	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
S1001342_RS01925	SM00857	Resolvase, N terminal domain
S1001342_RS02000	SM00463	Small MutS-related domain
S1001342_RS02005	SM01235	S1001342_RS02005
S1001342_RS02015	SM00978	S1001342_RS02015
S1001342_RS02020	SM00855	Phosphoglycerate mutase family
S1001342_RS02065	SM00852	Probable molybdopterin binding domain
S1001342_RS02100	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
S1001342_RS02150	SM00849	Metallo-beta-lactamase superfamily
S1001342_RS02160	SM00563	Phosphate acyltransferases
S1001342_RS02165	SM00996	S-adenosyl-L-homocysteine hydrolase
S1001342_RS02165	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
S1001342_RS02190	SM00861	Transketolase, pyrimidine binding domain
S1001342_RS02225	SM01207	S1001342_RS02225
S1001342_RS02235	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
S1001342_RS02235	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
S1001342_RS02235	SM00493	S1001342_RS02235
S1001342_RS02240	SM00955	S1001342_RS02240
S1001342_RS02245	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
S1001342_RS02245	SM00245	tail specific protease
S1001342_RS02280	SM00387	Histidine kinase-like ATPases
S1001342_RS02280	SM00433	TopoisomeraseII
S1001342_RS02295	SM00853	MutL C terminal dimerisation domain
S1001342_RS02295	SM01340	S1001342_RS02295
S1001342_RS02315	SM00904	Riboflavin kinase
S1001342_RS02330	SM01007	Class II Aldolase and Adducin N-terminal domain
S1001342_RS02380	SM00487	DEAD-like helicases superfamily
S1001342_RS02380	SM00490	helicase superfamily c-terminal domain
S1001342_RS02380	SM00847	Helicase associated domain (HA2)  Add an annotation
S1001342_RS02390	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
S1001342_RS02480	SM00345	helix_turn_helix gluconate operon transcriptional repressor
S1001342_RS02480	SM00895	S1001342_RS02480
S1001342_RS02515	SM00857	Resolvase, N terminal domain
S1001342_RS02530	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS02540	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS02570	SM00072	Guanylate kinase homologues.
S1001342_RS02585	SM00967	RNA 2'-O ribose methyltransferase substrate binding
S1001342_RS02590	SM00474	3'-5' exonuclease
S1001342_RS02595	SM00116	Domain in cystathionine beta-synthase and other proteins.
S1001342_RS02610	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS02730	SM00935	Outer membrane protein (OmpH-like)
S1001342_RS02740	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
S1001342_RS02775	SM00358	Double-stranded RNA binding motif
S1001342_RS02775	SM00535	Ribonuclease III family
S1001342_RS02790	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
S1001342_RS02790	SM00954	Region found in RelA / SpoT proteins
S1001342_RS02795	SM01409	S1001342_RS02795
S1001342_RS02810	SM00947	Carbonic anhydrase
S1001342_RS02830	SM00487	DEAD-like helicases superfamily
S1001342_RS02830	SM00490	helicase superfamily c-terminal domain
S1001342_RS02845	SM00838	Elongation factor G C-terminus
S1001342_RS02860	SM00564	beta-propeller repeat
S1001342_RS02870	SM01230	S1001342_RS02870
S1001342_RS02875	SM00938	Nitrogen regulatory protein P-II
S1001342_RS02900	SM01329	S1001342_RS02900
S1001342_RS03025	SM00833	Cobalamin synthesis protein cobW C-terminal domain
S1001342_RS03030	SM00320	WD40 repeats
S1001342_RS03060	SM00861	Transketolase, pyrimidine binding domain
S1001342_RS03145	SM00822	S1001342_RS03145
S1001342_RS03315	SM00450	Rhodanese Homology Domain
S1001342_RS03345	SM00729	Elongator protein 3, MiaB family, Radical SAM
S1001342_RS03385	SM00530	Helix-turn-helix XRE-family like proteins 
S1001342_RS03485	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
S1001342_RS03575	SM00530	Helix-turn-helix XRE-family like proteins 
S1001342_RS03585	SM00363	S4 RNA-binding domain
S1001342_RS03625	SM00507	HNH nucleases
S1001342_RS03765	SM00507	HNH nucleases
S1001342_RS03790	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
S1001342_RS03940	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS04075	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS04100	SM00248	ankyrin repeats
S1001342_RS04105	SM00861	Transketolase, pyrimidine binding domain
S1001342_RS04115	SM01350	S1001342_RS04115
S1001342_RS04160	SM00829	Enoylreductase
S1001342_RS04175	SM00729	Elongator protein 3, MiaB family, Radical SAM
S1001342_RS04255	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS04340	SM00028	Tetratricopeptide repeats
S1001342_RS04405	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
S1001342_RS04415	SM00849	Metallo-beta-lactamase superfamily
S1001342_RS04500	SM00849	Metallo-beta-lactamase superfamily
S1001342_RS04580	SM00434	DNA Topoisomerase IV
S1001342_RS04595	SM00316	Ribosomal protein S1-like RNA-binding domain
S1001342_RS04595	SM00322	K homology RNA-binding domain
S1001342_RS04600	SM01387	S1001342_RS04600
S1001342_RS04615	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS04645	SM00671	Sel1-like repeats.
S1001342_RS04655	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS04665	SM01018	B12 binding domain
S1001342_RS04740	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS04740	SM00962	SRP54-type protein, GTPase domain
S1001342_RS04740	SM00963	SRP54-type protein, helical bundle domain
S1001342_RS04745	SM00729	Elongator protein 3, MiaB family, Radical SAM
S1001342_RS04765	SM00487	DEAD-like helicases superfamily
S1001342_RS04765	SM00490	helicase superfamily c-terminal domain
S1001342_RS04805	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS04830	SM00829	Enoylreductase
S1001342_RS04840	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
S1001342_RS04905	SM01005	Alanine racemase, C-terminal domain
S1001342_RS04910	SM00344	helix_turn_helix ASNC type
S1001342_RS04930	SM00316	Ribosomal protein S1-like RNA-binding domain
S1001342_RS04930	SM00322	K homology RNA-binding domain
S1001342_RS04945	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS04960	SM00062	Bacterial periplasmic substrate-binding proteins
S1001342_RS04960	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
S1001342_RS04965	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS04975	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS05015	SM00878	Biotin carboxylase C-terminal domain
S1001342_RS05080	SM00732	Likely ribonuclease with RNase H fold.
S1001342_RS05095	SM00845	GatB domain
S1001342_RS05160	SM00530	Helix-turn-helix XRE-family like proteins 
S1001342_RS05205	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS05215	SM00645	Papain family cysteine protease
S1001342_RS05260	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS05265	SM00478	endonuclease III
S1001342_RS05275	SM00478	endonuclease III
S1001342_RS05355	SM00893	Electron transfer flavoprotein domain
S1001342_RS05360	SM00893	Electron transfer flavoprotein domain
S1001342_RS05375	SM00729	Elongator protein 3, MiaB family, Radical SAM
S1001342_RS05385	SM00100	Cyclic nucleotide-monophosphate binding domain
S1001342_RS05385	SM00419	helix_turn_helix, cAMP Regulatory protein
S1001342_RS05390	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
S1001342_RS05405	SM00363	S4 RNA-binding domain
S1001342_RS05450	SM00857	Resolvase, N terminal domain
S1001342_RS05500	SM00855	Phosphoglycerate mutase family
S1001342_RS05535	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS05535	SM00843	S1001342_RS05535
S1001342_RS05585	SM00840	S1001342_RS05585
S1001342_RS05625	SM00448	cheY-homologous receiver domain
S1001342_RS05625	SM00862	Transcriptional regulatory protein, C terminal
S1001342_RS05640	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS05685	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS05690	SM00278	Helix-hairpin-helix DNA-binding motif class 1
S1001342_RS05705	SM00957	SecA DEAD-like domain
S1001342_RS05705	SM00958	SecA preprotein cross-linking domain
S1001342_RS05740	SM00271	DnaJ molecular chaperone homology domain
S1001342_RS05780	SM00411	bacterial (prokaryotic) histone like domain
S1001342_RS05885	SM00470	ParB-like nuclease domain
S1001342_RS05900	SM01228	S1001342_RS05900
S1001342_RS05995	SM00464	Found in ATP-dependent protease La (LON)
S1001342_RS06020	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS06035	SM00932	Scaffold protein Nfu/NifU N terminal
S1001342_RS06055	SM01209	S1001342_RS06055
S1001342_RS06055	SM01210	S1001342_RS06055
S1001342_RS06105	SM00530	Helix-turn-helix XRE-family like proteins 
S1001342_RS06115	SM00829	Enoylreductase
S1001342_RS06130	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
S1001342_RS06130	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
S1001342_RS06135	SM00859	Semialdehyde dehydrogenase, NAD binding domain
S1001342_RS06180	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
S1001342_RS06185	SM00861	Transketolase, pyrimidine binding domain
S1001342_RS06210	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS06255	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS06265	SM00493	S1001342_RS06265
S1001342_RS06275	SM00905	Dihydroneopterin aldolase
S1001342_RS06300	SM00316	Ribosomal protein S1-like RNA-binding domain
S1001342_RS06335	SM00937	S1001342_RS06335
S1001342_RS06390	SM00917	LeuA allosteric (dimerisation) domain
S1001342_RS06410	SM00387	Histidine kinase-like ATPases
S1001342_RS06410	SM00388	His Kinase A (phosphoacceptor) domain
S1001342_RS06410	SM00448	cheY-homologous receiver domain
S1001342_RS06430	SM00986	Uracil DNA glycosylase superfamily
S1001342_RS06430	SM00987	UreE urease accessory protein, C-terminal domain 
S1001342_RS06440	SM00564	beta-propeller repeat
S1001342_RS06490	SM00490	helicase superfamily c-terminal domain
S1001342_RS06500	SM00347	helix_turn_helix multiple antibiotic resistance protein
S1001342_RS06550	SM00490	helicase superfamily c-terminal domain
S1001342_RS06570	SM00919	Malic enzyme, NAD binding domain
S1001342_RS06570	SM01274	S1001342_RS06570
S1001342_RS06575	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
S1001342_RS06575	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
S1001342_RS06615	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS06630	SM00341	Helicase and RNase D C-terminal
S1001342_RS06630	SM00474	3'-5' exonuclease
S1001342_RS06655	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS06685	SM00342	helix_turn_helix, arabinose operon control protein
S1001342_RS06720	SM00357	Cold shock protein domain
S1001342_RS06810	SM00347	helix_turn_helix multiple antibiotic resistance protein
S1001342_RS06880	SM00028	Tetratricopeptide repeats
S1001342_RS06910	SM00867	YceI-like domain 
S1001342_RS06930	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS06950	SM00271	DnaJ molecular chaperone homology domain
S1001342_RS07070	SM00487	DEAD-like helicases superfamily
S1001342_RS07070	SM00490	helicase superfamily c-terminal domain
S1001342_RS07205	SM01133	S1001342_RS07205
S1001342_RS07260	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS07260	SM01086	C-terminal, D2-small domain, of ClpB protein
S1001342_RS07290	SM00387	Histidine kinase-like ATPases
S1001342_RS07290	SM00388	His Kinase A (phosphoacceptor) domain
S1001342_RS07295	SM00448	cheY-homologous receiver domain
S1001342_RS07295	SM00862	Transcriptional regulatory protein, C terminal
S1001342_RS07310	SM00271	DnaJ molecular chaperone homology domain
S1001342_RS07330	SM00798	AICARFT/IMPCHase bienzyme
S1001342_RS07330	SM00851	MGS-like domain
S1001342_RS07365	SM00530	Helix-turn-helix XRE-family like proteins 
S1001342_RS07390	SM00357	Cold shock protein domain
S1001342_RS07390	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS07390	SM00959	Rho termination factor, N-terminal domain
S1001342_RS07420	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS07430	SM00788	Adenylosuccinate synthetase
S1001342_RS07435	SM00448	cheY-homologous receiver domain
S1001342_RS07435	SM00862	Transcriptional regulatory protein, C terminal
S1001342_RS07440	SM00387	Histidine kinase-like ATPases
S1001342_RS07440	SM00388	His Kinase A (phosphoacceptor) domain
S1001342_RS07470	SM01091	Transporter associated domain
S1001342_RS07475	SM00829	Enoylreductase
S1001342_RS07480	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS07500	SM00822	S1001342_RS07500
S1001342_RS07505	SM00859	Semialdehyde dehydrogenase, NAD binding domain
S1001342_RS07520	SM00387	Histidine kinase-like ATPases
S1001342_RS07540	SM00479	S1001342_RS07540
S1001342_RS07570	SM01252	S1001342_RS07570
S1001342_RS07595	SM00717	SANT  SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
S1001342_RS07810	SM00477	DNA/RNA non-specific endonuclease
S1001342_RS07810	SM00892	DNA/RNA non-specific endonuclease
S1001342_RS07825	SM00530	Helix-turn-helix XRE-family like proteins 
S1001342_RS07925	SM00450	Rhodanese Homology Domain
S1001342_RS08000	SM00729	Elongator protein 3, MiaB family, Radical SAM
S1001342_RS08015	SM00861	Transketolase, pyrimidine binding domain
S1001342_RS08035	SM01091	Transporter associated domain
S1001342_RS08050	SM00028	Tetratricopeptide repeats
S1001342_RS08085	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS08095	SM01400	S1001342_RS08095
S1001342_RS08100	SM00855	Phosphoglycerate mutase family
S1001342_RS08135	SM00822	S1001342_RS08135
S1001342_RS08165	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS08175	SM00903	Flavin reductase like domain
S1001342_RS08195	SM00347	helix_turn_helix multiple antibiotic resistance protein
S1001342_RS08205	SM00833	Cobalamin synthesis protein cobW C-terminal domain
S1001342_RS08220	SM00855	Phosphoglycerate mutase family
S1001342_RS08335	SM00671	Sel1-like repeats.
S1001342_RS08345	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
S1001342_RS08390	SM00903	Flavin reductase like domain
S1001342_RS08415	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS08430	SM00530	Helix-turn-helix XRE-family like proteins 
S1001342_RS08500	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
S1001342_RS08530	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
S1001342_RS08555	SM00345	helix_turn_helix gluconate operon transcriptional repressor
S1001342_RS08570	SM00564	beta-propeller repeat
S1001342_RS08620	SM00563	Phosphate acyltransferases
S1001342_RS08630	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
S1001342_RS08630	SM00474	3'-5' exonuclease
S1001342_RS08630	SM00475	5'-3' exonuclease
S1001342_RS08630	SM00482	DNA polymerase A domain
S1001342_RS08645	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS08655	SM00363	S4 RNA-binding domain
S1001342_RS08755	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
S1001342_RS08760	SM00836	DALR anticodon binding domain
S1001342_RS08760	SM01016	Arginyl tRNA synthetase N terminal dom
S1001342_RS08875	SM00479	S1001342_RS08875
S1001342_RS08930	SM00530	Helix-turn-helix XRE-family like proteins 
S1001342_RS08970	SM00990	S1001342_RS08970
S1001342_RS09125	SM01252	S1001342_RS09125
S1001342_RS09325	SM00642	Alpha-amylase domain
S1001342_RS09335	SM00642	Alpha-amylase domain
S1001342_RS09340	SM00642	Alpha-amylase domain
S1001342_RS09345	SM00642	Alpha-amylase domain
S1001342_RS09375	SM00878	Biotin carboxylase C-terminal domain
S1001342_RS09390	SM00796	Allophanate hydrolase subunit 1
S1001342_RS09395	SM00797	Allophanate hydrolase subunit 2
S1001342_RS09515	SM00460	Transglutaminase/protease-like homologues
S1001342_RS09570	SM00316	Ribosomal protein S1-like RNA-binding domain
S1001342_RS09585	SM00316	Ribosomal protein S1-like RNA-binding domain
S1001342_RS09590	SM00646	S1001342_RS09590
S1001342_RS09670	SM00028	Tetratricopeptide repeats
S1001342_RS09680	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
S1001342_RS09695	SM00387	Histidine kinase-like ATPases
S1001342_RS09700	SM00448	cheY-homologous receiver domain
S1001342_RS09700	SM00862	Transcriptional regulatory protein, C terminal
S1001342_RS09710	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS09715	SM00562	S1001342_RS09715
S1001342_RS09720	SM00729	Elongator protein 3, MiaB family, Radical SAM
S1001342_RS09740	SM00507	HNH nucleases
S1001342_RS09790	SM00481	DNA polymerase alpha chain like domain
S1001342_RS09835	SM00434	DNA Topoisomerase IV
S1001342_RS09845	SM01004	Delta-aminolevulinic acid dehydratase
S1001342_RS09875	SM00487	DEAD-like helicases superfamily
S1001342_RS09875	SM00490	helicase superfamily c-terminal domain
S1001342_RS09995	SM00292	breast cancer carboxy-terminal domain
S1001342_RS09995	SM00532	Ligase N family
S1001342_RS10015	SM00864	Tubulin/FtsZ family, GTPase domain
S1001342_RS10015	SM00865	Tubulin/FtsZ family, C-terminal domain
S1001342_RS10020	SM00842	Cell division protein FtsA
S1001342_RS10125	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
S1001342_RS10330	SM00852	Probable molybdopterin binding domain
S1001342_RS10375	SM01323	S1001342_RS10375
S1001342_RS10380	SM00487	DEAD-like helicases superfamily
S1001342_RS10380	SM00490	helicase superfamily c-terminal domain
S1001342_RS10505	SM00883	Chaperonin 10 Kd subunit
S1001342_RS10515	SM00357	Cold shock protein domain
S1001342_RS10520	SM00491	S1001342_RS10520
S1001342_RS10530	SM00841	Elongation factor P, C-terminal
S1001342_RS10530	SM01185	S1001342_RS10530
S1001342_RS10585	SM00971	Serine acetyltransferase, N-terminal
S1001342_RS10590	SM00938	Nitrogen regulatory protein P-II
S1001342_RS10595	SM00984	UDP binding domain
S1001342_RS10695	SM00091	PAS domain
S1001342_RS10695	SM00387	Histidine kinase-like ATPases
S1001342_RS10695	SM00388	His Kinase A (phosphoacceptor) domain
S1001342_RS10700	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS10700	SM00448	cheY-homologous receiver domain
S1001342_RS10705	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
S1001342_RS10705	SM00387	Histidine kinase-like ATPases
S1001342_RS10705	SM00388	His Kinase A (phosphoacceptor) domain
S1001342_RS10710	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS10710	SM00448	cheY-homologous receiver domain
S1001342_RS10730	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS10730	SM01086	C-terminal, D2-small domain, of ClpB protein
S1001342_RS10810	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS10840	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS10845	SM00363	S4 RNA-binding domain
S1001342_RS10865	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS10865	SM00962	SRP54-type protein, GTPase domain
S1001342_RS10865	SM00963	SRP54-type protein, helical bundle domain
S1001342_RS10900	SM01329	S1001342_RS10900
S1001342_RS10920	SM00347	helix_turn_helix multiple antibiotic resistance protein
S1001342_RS10925	SM00448	cheY-homologous receiver domain
S1001342_RS10925	SM00862	Transcriptional regulatory protein, C terminal
S1001342_RS10930	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
S1001342_RS10930	SM00387	Histidine kinase-like ATPases
S1001342_RS10930	SM00388	His Kinase A (phosphoacceptor) domain
S1001342_RS10960	SM00411	bacterial (prokaryotic) histone like domain
S1001342_RS10965	SM00422	helix_turn_helix, mercury resistance
S1001342_RS10985	SM00986	Uracil DNA glycosylase superfamily
S1001342_RS10985	SM00987	UreE urease accessory protein, C-terminal domain 
S1001342_RS10990	SM00411	bacterial (prokaryotic) histone like domain
S1001342_RS11010	SM00344	helix_turn_helix ASNC type
S1001342_RS11050	SM00978	S1001342_RS11050
S1001342_RS11080	SM00028	Tetratricopeptide repeats
S1001342_RS11085	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
S1001342_RS11085	SM00534	ATPase domain of DNA mismatch repair MUTS family
S1001342_RS11090	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
S1001342_RS11100	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS11115	SM00838	Elongation factor G C-terminus
S1001342_RS11115	SM00889	Elongation factor G, domain IV
S1001342_RS11145	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS11180	SM00487	DEAD-like helicases superfamily
S1001342_RS11180	SM00490	helicase superfamily c-terminal domain
S1001342_RS11215	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS11215	SM00994	ClpX C4-type zinc finger
S1001342_RS11215	SM01086	C-terminal, D2-small domain, of ClpB protein
S1001342_RS11220	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS11220	SM00464	Found in ATP-dependent protease La (LON)
S1001342_RS11225	SM00411	bacterial (prokaryotic) histone like domain
S1001342_RS11265	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
S1001342_RS11270	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
S1001342_RS11315	SM00849	Metallo-beta-lactamase superfamily
S1001342_RS11330	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS11340	SM00346	helix_turn_helix isocitrate lyase regulation
S1001342_RS11455	SM01007	Class II Aldolase and Adducin N-terminal domain
S1001342_RS11475	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS11480	SM00062	Bacterial periplasmic substrate-binding proteins
S1001342_RS11515	SM01092	CO dehydrogenase flavoprotein C-terminal domain
S1001342_RS11520	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
S1001342_RS11565	SM00829	Enoylreductase
S1001342_RS11590	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS11630	SM00870	S1001342_RS11630
S1001342_RS11640	SM00671	Sel1-like repeats.
S1001342_RS11665	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
S1001342_RS11670	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS11675	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS11725	SM00729	Elongator protein 3, MiaB family, Radical SAM
S1001342_RS11820	SM00014	Acid phosphatase homologues
S1001342_RS11830	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS11835	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS11855	SM00116	Domain in cystathionine beta-synthase and other proteins.
S1001342_RS11855	SM01240	S1001342_RS11855
S1001342_RS11875	SM00448	cheY-homologous receiver domain
S1001342_RS11875	SM00862	Transcriptional regulatory protein, C terminal
S1001342_RS11920	SM00530	Helix-turn-helix XRE-family like proteins 
S1001342_RS11955	SM00530	Helix-turn-helix XRE-family like proteins 
S1001342_RS11960	SM00530	Helix-turn-helix XRE-family like proteins 
S1001342_RS12265	SM00363	S4 RNA-binding domain
S1001342_RS12270	SM00861	Transketolase, pyrimidine binding domain
S1001342_RS12310	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
S1001342_RS12330	SM00852	Probable molybdopterin binding domain
S1001342_RS12375	SM00890	Domain of unknown function
S1001342_RS12440	SM00564	beta-propeller repeat
S1001342_RS12470	SM00886	Stress responsive A/B Barrel Domain
S1001342_RS12640	SM01266	S1001342_RS12640
S1001342_RS12695	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS12730	SM01068	Putative carbohydrate binding domain
S1001342_RS12745	SM01060	S1001342_RS12745
S1001342_RS12830	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS12905	SM01092	CO dehydrogenase flavoprotein C-terminal domain
S1001342_RS12910	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
S1001342_RS12965	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS13005	SM00829	Enoylreductase
S1001342_RS13015	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS13020	SM00448	cheY-homologous receiver domain
S1001342_RS13045	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS13050	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS13060	SM00341	Helicase and RNase D C-terminal
S1001342_RS13060	SM00487	DEAD-like helicases superfamily
S1001342_RS13060	SM00490	helicase superfamily c-terminal domain
S1001342_RS13060	SM00956	S1001342_RS13060
S1001342_RS13065	SM00420	helix_turn_helix, Deoxyribose operon repressor
S1001342_RS13065	SM01134	S1001342_RS13065
S1001342_RS13110	SM00822	S1001342_RS13110
S1001342_RS13155	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS13180	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
S1001342_RS13180	SM01232	S1001342_RS13180
S1001342_RS13265	SM00857	Resolvase, N terminal domain
S1001342_RS13465	SM00966	SpoVT / AbrB like domain 
S1001342_RS13590	SM00091	PAS domain
S1001342_RS13665	SM00530	Helix-turn-helix XRE-family like proteins 
S1001342_RS13695	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
S1001342_RS13725	SM00966	SpoVT / AbrB like domain 
S1001342_RS13790	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS13800	SM00422	helix_turn_helix, mercury resistance
S1001342_RS13830	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
S1001342_RS13940	SM00773	Proposed nucleic acid binding domain
S1001342_RS13945	SM00411	bacterial (prokaryotic) histone like domain
S1001342_RS13950	SM01040	BRO family, N-terminal domain
S1001342_RS13995	SM00966	SpoVT / AbrB like domain 
S1001342_RS14045	SM00487	DEAD-like helicases superfamily
S1001342_RS14050	SM00470	ParB-like nuclease domain
S1001342_RS14090	SM00822	S1001342_RS14090
S1001342_RS14125	SM00729	Elongator protein 3, MiaB family, Radical SAM
S1001342_RS14140	SM00345	helix_turn_helix gluconate operon transcriptional repressor
S1001342_RS14205	SM00448	cheY-homologous receiver domain
S1001342_RS14205	SM00862	Transcriptional regulatory protein, C terminal
S1001342_RS14210	SM00387	Histidine kinase-like ATPases
S1001342_RS14210	SM00388	His Kinase A (phosphoacceptor) domain
S1001342_RS14235	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
S1001342_RS14275	SM01012	S1001342_RS14275
S1001342_RS14360	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS14375	SM00822	S1001342_RS14375
S1001342_RS14385	SM00448	cheY-homologous receiver domain
S1001342_RS14385	SM00862	Transcriptional regulatory protein, C terminal
S1001342_RS14390	SM00387	Histidine kinase-like ATPases
S1001342_RS14390	SM00388	His Kinase A (phosphoacceptor) domain
S1001342_RS14465	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS14535	SM00421	helix_turn_helix, Lux Regulon
S1001342_RS14540	SM00849	Metallo-beta-lactamase superfamily
S1001342_RS14585	SM00487	DEAD-like helicases superfamily
S1001342_RS14595	SM00966	SpoVT / AbrB like domain 
S1001342_RS14610	SM00477	DNA/RNA non-specific endonuclease
S1001342_RS14610	SM00892	DNA/RNA non-specific endonuclease
S1001342_RS14645	SM00857	Resolvase, N terminal domain
S1001342_RS14670	SM00966	SpoVT / AbrB like domain 
S1001342_RS14730	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS14735	SM00347	helix_turn_helix multiple antibiotic resistance protein
S1001342_RS14735	SM00529	Helix-turn-helix diphteria tox regulatory element
S1001342_RS14765	SM00966	SpoVT / AbrB like domain 
S1001342_RS14785	SM00507	HNH nucleases
S1001342_RS14870	SM00470	ParB-like nuclease domain
S1001342_RS14875	SM00487	DEAD-like helicases superfamily
S1001342_RS14880	SM00470	ParB-like nuclease domain
S1001342_RS14970	SM00342	helix_turn_helix, arabinose operon control protein
S1001342_RS14995	SM00278	Helix-hairpin-helix DNA-binding motif class 1
S1001342_RS14995	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS15005	SM00477	DNA/RNA non-specific endonuclease
S1001342_RS15005	SM00892	DNA/RNA non-specific endonuclease
S1001342_RS15110	SM00966	SpoVT / AbrB like domain 
S1001342_RS15160	SM01040	BRO family, N-terminal domain
S1001342_RS15165	SM00411	bacterial (prokaryotic) histone like domain
S1001342_RS15170	SM00773	Proposed nucleic acid binding domain
S1001342_RS15305	SM00530	Helix-turn-helix XRE-family like proteins 
S1001342_RS15430	SM00507	HNH nucleases
S1001342_RS15535	SM00477	DNA/RNA non-specific endonuclease
S1001342_RS15535	SM00892	DNA/RNA non-specific endonuclease
S1001342_RS15550	SM00966	SpoVT / AbrB like domain 
S1001342_RS15570	SM00382	ATPases associated with a variety of cellular activities
S1001342_RS15590	SM00487	DEAD-like helicases superfamily
S1001342_RS15660	SM00670	Large family of predicted nucleotide-binding domains
S1001342_RS15700	SM00857	Resolvase, N terminal domain
S1001342_RS15735	SM00857	Resolvase, N terminal domain
S1001342_RS15745	SM00857	Resolvase, N terminal domain
S1001342_RS15760	SM01321	S1001342_RS15760
