locus-tag class description CJF59_RS00100 PF03354 Phage Terminase CJF59_RS00220 PF00589 Phage integrase family CJF59_RS00220 PF02920 DNA binding domain of tn916 integrase CJF59_RS00235 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CJF59_RS00235 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CJF59_RS00240 PF12631 MnmE helical domain CJF59_RS00240 PF01926 50S ribosome-binding GTPase CJF59_RS00240 PF10396 GTP-binding protein TrmE N-terminus CJF59_RS00245 PF01134 Glucose inhibited division protein A CJF59_RS00245 PF13932 GidA associated domain CJF59_RS00250 PF02527 rRNA small subunit methyltransferase G CJF59_RS00255 PF13614 AAA domain CJF59_RS00260 PF02195 ParB-like nuclease domain CJF59_RS00260 PF17762 HTH domain found in ParB protein CJF59_RS00280 PF13811 Domain of unknown function (DUF4186) CJF59_RS00285 PF01494 FAD binding domain CJF59_RS00290 PF00881 Nitroreductase family CJF59_RS00295 PF01230 HIT domain CJF59_RS00300 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CJF59_RS00305 PF00977 Histidine biosynthesis protein CJF59_RS00310 PF00977 Histidine biosynthesis protein CJF59_RS00315 PF00117 Glutamine amidotransferase class-I CJF59_RS00320 PF00475 Imidazoleglycerol-phosphate dehydratase CJF59_RS00325 PF00795 Carbon-nitrogen hydrolase CJF59_RS00325 PF02540 NAD synthase CJF59_RS00335 PF00535 Glycosyl transferase family 2 CJF59_RS00355 PF00216 Bacterial DNA-binding protein CJF59_RS00375 PF03807 NADP oxidoreductase coenzyme F420-dependent CJF59_RS00375 PF14748 Pyrroline-5-carboxylate reductase dimerisation CJF59_RS00390 PF00684 DnaJ central domain CJF59_RS00390 PF01556 DnaJ C terminal domain CJF59_RS00390 PF00226 DnaJ domain CJF59_RS00415 PF01960 ArgJ family CJF59_RS00425 PF02810 SEC-C motif CJF59_RS00425 PF07516 SecA Wing and Scaffold domain CJF59_RS00425 PF01043 SecA preprotein cross-linking domain CJF59_RS00425 PF07517 SecA DEAD-like domain CJF59_RS00430 PF01709 Transcriptional regulator CJF59_RS00435 PF02075 Crossover junction endodeoxyribonuclease RuvC CJF59_RS00440 PF01330 RuvA N terminal domain CJF59_RS00440 PF07499 RuvA, C-terminal domain CJF59_RS00445 PF05496 Holliday junction DNA helicase RuvB P-loop domain CJF59_RS00445 PF17864 RuvB AAA lid domain CJF59_RS00445 PF05491 RuvB C-terminal winged helix domain CJF59_RS00450 PF03061 Thioesterase superfamily CJF59_RS00455 PF01618 MotA/TolQ/ExbB proton channel family CJF59_RS00460 PF02472 Biopolymer transport protein ExbD/TolR CJF59_RS00470 PF07676 WD40-like Beta Propeller Repeat CJF59_RS00470 PF04052 TolB amino-terminal domain CJF59_RS00475 PF00691 OmpA family CJF59_RS00485 PF01171 PP-loop family CJF59_RS00490 PF17862 AAA+ lid domain CJF59_RS00490 PF00004 ATPase family associated with various cellular activities (AAA) CJF59_RS00490 PF06480 FtsH Extracellular CJF59_RS00490 PF01434 Peptidase family M41 CJF59_RS00495 PF00809 Pterin binding enzyme CJF59_RS00500 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CJF59_RS00500 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CJF59_RS00500 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CJF59_RS00500 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CJF59_RS00505 PF00486 Transcriptional regulatory protein, C terminal CJF59_RS00505 PF00072 Response regulator receiver domain CJF59_RS00510 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CJF59_RS00515 PF12705 PD-(D/E)XK nuclease superfamily CJF59_RS00520 PF12705 PD-(D/E)XK nuclease superfamily CJF59_RS00520 PF00580 UvrD/REP helicase N-terminal domain CJF59_RS00520 PF13361 UvrD-like helicase C-terminal domain CJF59_RS00525 PF00085 Thioredoxin CJF59_RS00530 PF17848 Acetyl-coA carboxylase zinc finger domain CJF59_RS00530 PF01039 Carboxyl transferase domain CJF59_RS00535 PF08245 Mur ligase middle domain CJF59_RS00535 PF02875 Mur ligase family, glutamate ligase domain CJF59_RS00545 PF09190 DALR domain CJF59_RS00545 PF01406 tRNA synthetases class I (C) catalytic domain CJF59_RS00555 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CJF59_RS00560 PF00266 Aminotransferase class-V CJF59_RS00565 PF00266 Aminotransferase class-V CJF59_RS00570 PF00111 2Fe-2S iron-sulfur cluster binding domain CJF59_RS00585 PF00534 Glycosyl transferases group 1 CJF59_RS00585 PF13439 Glycosyltransferase Family 4 CJF59_RS00590 PF01479 S4 domain CJF59_RS00590 PF00849 RNA pseudouridylate synthase CJF59_RS00595 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CJF59_RS00595 PF17854 FtsK alpha domain CJF59_RS00595 PF09397 Ftsk gamma domain CJF59_RS00595 PF01580 FtsK/SpoIIIE family CJF59_RS00600 PF00535 Glycosyl transferase family 2 CJF59_RS00605 PF04321 RmlD substrate binding domain CJF59_RS00610 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CJF59_RS00615 PF00483 Nucleotidyl transferase CJF59_RS00620 PF16363 GDP-mannose 4,6 dehydratase CJF59_RS00630 PF00300 Histidine phosphatase superfamily (branch 1) CJF59_RS00635 PF01523 Putative modulator of DNA gyrase CJF59_RS00640 PF00579 tRNA synthetases class I (W and Y) CJF59_RS00660 PF01258 Prokaryotic dksA/traR C4-type zinc finger CJF59_RS00670 PF00436 Single-strand binding protein family CJF59_RS00680 PF00849 RNA pseudouridylate synthase CJF59_RS00680 PF01479 S4 domain CJF59_RS00685 PF07722 Peptidase C26 CJF59_RS00690 PF14437 MafB19-like deaminase CJF59_RS00695 PF13180 PDZ domain CJF59_RS00700 PF13545 Crp-like helix-turn-helix domain CJF59_RS00700 PF00027 Cyclic nucleotide-binding domain CJF59_RS00710 PF04055 Radical SAM superfamily CJF59_RS00725 PF01012 Electron transfer flavoprotein domain CJF59_RS00730 PF01012 Electron transfer flavoprotein domain CJF59_RS00730 PF00766 Electron transfer flavoprotein FAD-binding domain CJF59_RS00740 PF02321 Outer membrane efflux protein CJF59_RS00775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_RS00775 PF03466 LysR substrate binding domain CJF59_RS00785 PF07690 Major Facilitator Superfamily CJF59_RS00790 PF03466 LysR substrate binding domain CJF59_RS00790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_RS00815 PF10502 Signal peptidase, peptidase S26 CJF59_RS00840 PF01381 Helix-turn-helix CJF59_RS00855 PF02899 Phage integrase, N-terminal SAM-like domain CJF59_RS00855 PF00589 Phage integrase family CJF59_RS00870 PF00133 tRNA synthetases class I (I, L, M and V) CJF59_RS00870 PF13603 Leucyl-tRNA synthetase, Domain 2 CJF59_RS00870 PF08264 Anticodon-binding domain of tRNA CJF59_RS00875 PF12100 Domain of unknown function (DUF3576) CJF59_RS00895 PF14815 NUDIX domain CJF59_RS00895 PF00730 HhH-GPD superfamily base excision DNA repair protein CJF59_RS00900 PF00762 Ferrochelatase CJF59_RS00905 PF10576 Iron-sulfur binding domain of endonuclease III CJF59_RS00905 PF00633 Helix-hairpin-helix motif CJF59_RS00905 PF00730 HhH-GPD superfamily base excision DNA repair protein CJF59_RS00910 PF00664 ABC transporter transmembrane region CJF59_RS00910 PF00005 ABC transporter CJF59_RS00920 PF02934 GatB/GatE catalytic domain CJF59_RS00920 PF02637 GatB domain CJF59_RS00925 PF01425 Amidase CJF59_RS00930 PF02686 Glu-tRNAGln amidotransferase C subunit CJF59_RS00935 PF03652 Holliday junction resolvase CJF59_RS00945 PF00202 Aminotransferase class-III CJF59_RS00970 PF04966 Carbohydrate-selective porin, OprB family CJF59_RS00975 PF10634 Fe2+ transport protein CJF59_RS00980 PF03239 Iron permease FTR1 family CJF59_RS00995 PF01964 Radical SAM ThiC family CJF59_RS00995 PF13667 ThiC-associated domain CJF59_RS01000 PF00083 Sugar (and other) transporter CJF59_RS01005 PF00289 Biotin carboxylase, N-terminal domain CJF59_RS01005 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CJF59_RS01005 PF02785 Biotin carboxylase C-terminal domain CJF59_RS01010 PF00364 Biotin-requiring enzyme CJF59_RS01015 PF01220 Dehydroquinase class II CJF59_RS01020 PF03330 Lytic transglycolase CJF59_RS01020 PF05036 Sporulation related domain CJF59_RS01025 PF03631 Virulence factor BrkB CJF59_RS01030 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CJF59_RS01030 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CJF59_RS01040 PF03379 CcmB protein CJF59_RS01045 PF00005 ABC transporter CJF59_RS01050 PF00694 Aconitase C-terminal domain CJF59_RS01050 PF00330 Aconitase family (aconitate hydratase) CJF59_RS01055 PF00005 ABC transporter CJF59_RS01060 PF00528 Binding-protein-dependent transport system inner membrane component CJF59_RS01065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_RS01065 PF03466 LysR substrate binding domain CJF59_RS01075 PF10431 C-terminal, D2-small domain, of ClpB protein CJF59_RS01075 PF02861 Clp amino terminal domain, pathogenicity island component CJF59_RS01075 PF17871 AAA lid domain CJF59_RS01075 PF07724 AAA domain (Cdc48 subfamily) CJF59_RS01075 PF00004 ATPase family associated with various cellular activities (AAA) CJF59_RS01085 PF02576 RimP N-terminal domain CJF59_RS01085 PF17384 RimP C-terminal SH3 domain CJF59_RS01090 PF08529 NusA N-terminal domain CJF59_RS01090 PF13184 NusA-like KH domain CJF59_RS01090 PF00575 S1 RNA binding domain CJF59_RS01100 PF00009 Elongation factor Tu GTP binding domain CJF59_RS01100 PF04760 Translation initiation factor IF-2, N-terminal region CJF59_RS01100 PF08364 Bacterial translation initiation factor IF-2 associated region CJF59_RS01100 PF11987 Translation-initiation factor 2 CJF59_RS01105 PF02033 Ribosome-binding factor A CJF59_RS01110 PF01037 Lrp/AsnC ligand binding domain CJF59_RS01115 PF01168 Alanine racemase, N-terminal domain CJF59_RS01115 PF00842 Alanine racemase, C-terminal domain CJF59_RS01120 PF01266 FAD dependent oxidoreductase CJF59_RS01130 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJF59_RS01135 PF05683 Fumarase C-terminus CJF59_RS01135 PF05681 Fumarate hydratase (Fumerase) CJF59_RS01150 PF02511 Thymidylate synthase complementing protein CJF59_RS01165 PF10609 NUBPL iron-transfer P-loop NTPase CJF59_RS01180 PF13180 PDZ domain CJF59_RS01190 PF00107 Zinc-binding dehydrogenase CJF59_RS01190 PF08240 Alcohol dehydrogenase GroES-like domain CJF59_RS01200 PF00920 Dehydratase family CJF59_RS01205 PF00528 Binding-protein-dependent transport system inner membrane component CJF59_RS01210 PF00528 Binding-protein-dependent transport system inner membrane component CJF59_RS01215 PF00005 ABC transporter CJF59_RS01220 PF01895 PhoU domain CJF59_RS01235 PF00572 Ribosomal protein L13 CJF59_RS01240 PF00380 Ribosomal protein S9/S16 CJF59_RS01255 PF00270 DEAD/DEAH box helicase CJF59_RS01255 PF00271 Helicase conserved C-terminal domain CJF59_RS01255 PF03880 DbpA RNA binding domain CJF59_RS01265 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJF59_RS01270 PF01678 Diaminopimelate epimerase CJF59_RS01275 PF04055 Radical SAM superfamily CJF59_RS01275 PF00919 Uncharacterized protein family UPF0004 CJF59_RS01280 PF00448 SRP54-type protein, GTPase domain CJF59_RS01280 PF02881 SRP54-type protein, helical bundle domain CJF59_RS01285 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter CJF59_RS01290 PF00119 ATP synthase A chain CJF59_RS01295 PF00137 ATP synthase subunit C CJF59_RS01300 PF00430 ATP synthase B/B' CF(0) CJF59_RS01305 PF00430 ATP synthase B/B' CF(0) CJF59_RS01310 PF00535 Glycosyl transferase family 2 CJF59_RS01315 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase CJF59_RS01325 PF04403 Paraquat-inducible protein A CJF59_RS01330 PF02470 MlaD protein CJF59_RS01340 PF13537 Glutamine amidotransferase domain CJF59_RS01340 PF00156 Phosphoribosyl transferase domain CJF59_RS01355 PF02574 Homocysteine S-methyltransferase CJF59_RS01355 PF00809 Pterin binding enzyme CJF59_RS01355 PF02965 Vitamin B12 dependent methionine synthase, activation domain CJF59_RS01355 PF02607 B12 binding domain CJF59_RS01355 PF02310 B12 binding domain CJF59_RS01365 PF00664 ABC transporter transmembrane region CJF59_RS01365 PF03412 Peptidase C39 family CJF59_RS01365 PF00005 ABC transporter CJF59_RS01400 PF02470 MlaD protein CJF59_RS01405 PF00005 ABC transporter CJF59_RS01410 PF02405 Permease MlaE CJF59_RS01415 PF16198 tRNA pseudouridylate synthase B C-terminal domain CJF59_RS01415 PF01509 TruB family pseudouridylate synthase (N terminal domain) CJF59_RS01420 PF00312 Ribosomal protein S15 CJF59_RS01425 PF01138 3' exoribonuclease family, domain 1 CJF59_RS01425 PF03725 3' exoribonuclease family, domain 2 CJF59_RS01425 PF00575 S1 RNA binding domain CJF59_RS01425 PF00013 KH domain CJF59_RS01425 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CJF59_RS01440 PF00521 DNA gyrase/topoisomerase IV, subunit A CJF59_RS01440 PF03989 DNA gyrase C-terminal domain, beta-propeller CJF59_RS01445 PF01467 Cytidylyltransferase-like CJF59_RS01450 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CJF59_RS01470 PF01381 Helix-turn-helix CJF59_RS01505 PF13307 Helicase C-terminal domain CJF59_RS01505 PF04851 Type III restriction enzyme, res subunit CJF59_RS01505 PF00929 Exonuclease CJF59_RS01565 PF02899 Phage integrase, N-terminal SAM-like domain CJF59_RS01565 PF00589 Phage integrase family CJF59_RS01595 PF00574 Clp protease CJF59_RS01710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_RS01710 PF03466 LysR substrate binding domain CJF59_RS01720 PF02675 S-adenosylmethionine decarboxylase CJF59_RS01725 PF17284 Spermidine synthase tetramerisation domain CJF59_RS01730 PF01571 Aminomethyltransferase folate-binding domain CJF59_RS01730 PF08669 Glycine cleavage T-protein C-terminal barrel domain CJF59_RS01735 PF01597 Glycine cleavage H-protein CJF59_RS01740 PF02347 Glycine cleavage system P-protein CJF59_RS01770 PF00753 Metallo-beta-lactamase superfamily CJF59_RS01780 PF01370 NAD dependent epimerase/dehydratase family CJF59_RS01815 PF12802 MarR family CJF59_RS01820 PF01494 FAD binding domain CJF59_RS01825 PF00111 2Fe-2S iron-sulfur cluster binding domain CJF59_RS01825 PF01799 [2Fe-2S] binding domain CJF59_RS01830 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CJF59_RS01830 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CJF59_RS01830 PF00034 Cytochrome c CJF59_RS01840 PF00857 Isochorismatase family CJF59_RS01845 PF00561 alpha/beta hydrolase fold CJF59_RS01850 PF17645 Arylmalonate decarboxylase CJF59_RS01855 PF07690 Major Facilitator Superfamily CJF59_RS01865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_RS01865 PF03466 LysR substrate binding domain CJF59_RS01875 PF13533 Biotin-lipoyl like CJF59_RS01880 PF02321 Outer membrane efflux protein CJF59_RS01890 PF03960 ArsC family CJF59_RS01900 PF01925 Sulfite exporter TauE/SafE CJF59_RS01905 PF00753 Metallo-beta-lactamase superfamily CJF59_RS01910 PF10417 C-terminal domain of 1-Cys peroxiredoxin CJF59_RS01910 PF00578 AhpC/TSA family CJF59_RS01920 PF03352 Methyladenine glycosylase CJF59_RS01930 PF03960 ArsC family CJF59_RS01935 PF00210 Ferritin-like domain CJF59_RS01955 PF00205 Thiamine pyrophosphate enzyme, central domain CJF59_RS01955 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJF59_RS01955 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJF59_RS01960 PF03824 High-affinity nickel-transport protein CJF59_RS01965 PF01774 UreD urease accessory protein CJF59_RS01970 PF00547 Urease, gamma subunit CJF59_RS01975 PF00699 Urease beta subunit CJF59_RS01980 PF00449 Urease alpha-subunit, N-terminal domain CJF59_RS01980 PF01979 Amidohydrolase family CJF59_RS01985 PF05194 UreE urease accessory protein, C-terminal domain CJF59_RS01985 PF02814 UreE urease accessory protein, N-terminal domain CJF59_RS01990 PF01730 UreF CJF59_RS01995 PF02492 CobW/HypB/UreG, nucleotide-binding domain CJF59_RS02010 PF00486 Transcriptional regulatory protein, C terminal CJF59_RS02010 PF00072 Response regulator receiver domain CJF59_RS02015 PF18415 Histidine kinase receptor ArcB trans-membrane domain CJF59_RS02015 PF00989 PAS fold CJF59_RS02015 PF01627 Hpt domain CJF59_RS02015 PF00512 His Kinase A (phospho-acceptor) domain CJF59_RS02015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJF59_RS02015 PF00072 Response regulator receiver domain CJF59_RS02025 PF02653 Branched-chain amino acid transport system / permease component CJF59_RS02035 PF00005 ABC transporter CJF59_RS02035 PF12399 Branched-chain amino acid ATP-binding cassette transporter CJF59_RS02040 PF00005 ABC transporter CJF59_RS02055 PF07690 Major Facilitator Superfamily CJF59_RS02065 PF03466 LysR substrate binding domain CJF59_RS02065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_RS02080 PF01609 Transposase DDE domain CJF59_RS02090 PF00155 Aminotransferase class I and II CJF59_RS02090 PF00392 Bacterial regulatory proteins, gntR family CJF59_RS02100 PF00795 Carbon-nitrogen hydrolase CJF59_RS02115 PF02769 AIR synthase related protein, C-terminal domain CJF59_RS02115 PF00586 AIR synthase related protein, N-terminal domain CJF59_RS02120 PF00534 Glycosyl transferases group 1 CJF59_RS02135 PF13193 AMP-binding enzyme C-terminal domain CJF59_RS02135 PF16177 Acetyl-coenzyme A synthetase N-terminus CJF59_RS02135 PF00501 AMP-binding enzyme CJF59_RS02140 PF07690 Major Facilitator Superfamily CJF59_RS02145 PF00117 Glutamine amidotransferase class-I CJF59_RS02155 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CJF59_RS02155 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CJF59_RS02160 PF00392 Bacterial regulatory proteins, gntR family CJF59_RS02160 PF00155 Aminotransferase class I and II CJF59_RS02170 PF00701 Dihydrodipicolinate synthetase family CJF59_RS02190 PF02311 AraC-like ligand binding domain CJF59_RS02190 PF12833 Helix-turn-helix domain CJF59_RS02195 PF00664 ABC transporter transmembrane region CJF59_RS02195 PF00005 ABC transporter CJF59_RS02195 PF04954 Siderophore-interacting protein CJF59_RS02195 PF08021 Siderophore-interacting FAD-binding domain CJF59_RS02200 PF00664 ABC transporter transmembrane region CJF59_RS02200 PF00005 ABC transporter CJF59_RS02235 PF00561 alpha/beta hydrolase fold CJF59_RS02240 PF09278 MerR, DNA binding CJF59_RS02240 PF00376 MerR family regulatory protein CJF59_RS02260 PF02661 Fic/DOC family CJF59_RS02445 PF06969 HemN C-terminal domain CJF59_RS02445 PF04055 Radical SAM superfamily CJF59_RS02450 PF02705 K+ potassium transporter CJF59_RS02455 PF01168 Alanine racemase, N-terminal domain CJF59_RS02460 PF08240 Alcohol dehydrogenase GroES-like domain CJF59_RS02460 PF00107 Zinc-binding dehydrogenase CJF59_RS02465 PF00654 Voltage gated chloride channel CJF59_RS02490 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CJF59_RS02495 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CJF59_RS02505 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CJF59_RS02505 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CJF59_RS02510 PF00923 Transaldolase/Fructose-6-phosphate aldolase CJF59_RS02515 PF00456 Transketolase, thiamine diphosphate binding domain CJF59_RS02515 PF02780 Transketolase, C-terminal domain CJF59_RS02515 PF02779 Transketolase, pyrimidine binding domain CJF59_RS02525 PF00155 Aminotransferase class I and II CJF59_RS02540 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CJF59_RS02545 PF00005 ABC transporter CJF59_RS02565 PF02578 Multi-copper polyphenol oxidoreductase laccase CJF59_RS02575 PF01790 Prolipoprotein diacylglyceryl transferase CJF59_RS02580 PF01370 NAD dependent epimerase/dehydratase family CJF59_RS02590 PF02652 L-lactate permease CJF59_RS02595 PF01464 Transglycosylase SLT domain CJF59_RS02595 PF10145 Phage-related minor tail protein CJF59_RS02595 PF01551 Peptidase family M23 CJF59_RS02600 PF00083 Sugar (and other) transporter CJF59_RS02615 PF02540 NAD synthase CJF59_RS02615 PF00117 Glutamine amidotransferase class-I CJF59_RS02615 PF00958 GMP synthase C terminal domain CJF59_RS02620 PF00589 Phage integrase family CJF59_RS02620 PF13356 Arm DNA-binding domain CJF59_RS02635 PF10134 Replication initiator protein A CJF59_RS02650 PF00239 Resolvase, N terminal domain CJF59_RS02650 PF02796 Helix-turn-helix domain of resolvase CJF59_RS02655 PF00271 Helicase conserved C-terminal domain CJF59_RS02655 PF00176 SNF2 family N-terminal domain CJF59_RS02660 PF01555 DNA methylase CJF59_RS02670 PF00291 Pyridoxal-phosphate dependent enzyme CJF59_RS02670 PF00571 CBS domain CJF59_RS02685 PF01008 Initiation factor 2 subunit family CJF59_RS02700 PF01475 Ferric uptake regulator family CJF59_RS02710 PF00005 ABC transporter CJF59_RS02715 PF00950 ABC 3 transport family CJF59_RS02720 PF01613 Flavin reductase like domain CJF59_RS02725 PF00378 Enoyl-CoA hydratase/isomerase CJF59_RS02730 PF01184 GPR1/FUN34/yaaH family CJF59_RS02735 PF04632 Fusaric acid resistance protein family CJF59_RS02750 PF07683 Cobalamin synthesis protein cobW C-terminal domain CJF59_RS02750 PF02492 CobW/HypB/UreG, nucleotide-binding domain CJF59_RS02755 PF02514 CobN/Magnesium Chelatase CJF59_RS02760 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CJF59_RS02760 PF07685 CobB/CobQ-like glutamine amidotransferase domain CJF59_RS02770 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CJF59_RS02770 PF12557 Cob(I)alamin adenosyltransferase N terminal CJF59_RS02775 PF07685 CobB/CobQ-like glutamine amidotransferase domain CJF59_RS02775 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CJF59_RS02780 PF00881 Nitroreductase family CJF59_RS02785 PF03186 CobD/Cbib protein CJF59_RS02790 PF00155 Aminotransferase class I and II CJF59_RS02795 PF02654 Cobalamin-5-phosphate synthase CJF59_RS02800 PF02277 Phosphoribosyltransferase CJF59_RS02805 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CJF59_RS02810 PF07690 Major Facilitator Superfamily CJF59_RS02815 PF00171 Aldehyde dehydrogenase family CJF59_RS02820 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CJF59_RS02820 PF00034 Cytochrome c CJF59_RS02825 PF00732 GMC oxidoreductase CJF59_RS02825 PF05199 GMC oxidoreductase CJF59_RS02845 PF00375 Sodium:dicarboxylate symporter family CJF59_RS02850 PF00355 Rieske [2Fe-2S] domain CJF59_RS02865 PF02472 Biopolymer transport protein ExbD/TolR CJF59_RS02870 PF01618 MotA/TolQ/ExbB proton channel family CJF59_RS02885 PF00239 Resolvase, N terminal domain CJF59_RS02885 PF02796 Helix-turn-helix domain of resolvase CJF59_RS02940 PF14824 Sirohaem biosynthesis protein central CJF59_RS02940 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJF59_RS02940 PF10414 Sirohaem synthase dimerisation region CJF59_RS02945 PF02913 FAD linked oxidases, C-terminal domain CJF59_RS02945 PF01565 FAD binding domain CJF59_RS02950 PF03180 NLPA lipoprotein CJF59_RS02955 PF00005 ABC transporter CJF59_RS02955 PF09383 NIL domain CJF59_RS02960 PF00528 Binding-protein-dependent transport system inner membrane component CJF59_RS02965 PF00042 Globin CJF59_RS02965 PF00970 Oxidoreductase FAD-binding domain CJF59_RS02965 PF00175 Oxidoreductase NAD-binding domain CJF59_RS02970 PF01381 Helix-turn-helix CJF59_RS02975 PF00144 Beta-lactamase CJF59_RS02980 PF13532 2OG-Fe(II) oxygenase superfamily CJF59_RS02990 PF00474 Sodium:solute symporter family CJF59_RS03005 PF03702 Anhydro-N-acetylmuramic acid kinase CJF59_RS03015 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CJF59_RS03020 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CJF59_RS03030 PF02556 Preprotein translocase subunit SecB CJF59_RS03040 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CJF59_RS03045 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CJF59_RS03070 PF00324 Amino acid permease CJF59_RS03075 PF04454 Encapsulating protein for peroxidase CJF59_RS03085 PF01654 Cytochrome bd terminal oxidase subunit I CJF59_RS03090 PF02322 Cytochrome bd terminal oxidase subunit II CJF59_RS03105 PF08946 Osmosensory transporter coiled coil CJF59_RS03105 PF00083 Sugar (and other) transporter CJF59_RS03120 PF01367 5'-3' exonuclease, C-terminal SAM fold CJF59_RS03120 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CJF59_RS03120 PF01612 3'-5' exonuclease CJF59_RS03120 PF00476 DNA polymerase family A CJF59_RS03125 PF01063 Amino-transferase class IV CJF59_RS03130 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CJF59_RS03135 PF00005 ABC transporter CJF59_RS03140 PF01032 FecCD transport family CJF59_RS03145 PF00849 RNA pseudouridylate synthase CJF59_RS03150 PF00140 Sigma-70 factor, region 1.2 CJF59_RS03150 PF04542 Sigma-70 region 2 CJF59_RS03150 PF04545 Sigma-70, region 4 CJF59_RS03155 PF01368 DHH family CJF59_RS03155 PF02272 DHHA1 domain CJF59_RS03155 PF17768 RecJ OB domain CJF59_RS03160 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CJF59_RS03165 PF03447 Homoserine dehydrogenase, NAD binding domain CJF59_RS03165 PF00742 Homoserine dehydrogenase CJF59_RS03165 PF01842 ACT domain CJF59_RS03170 PF00155 Aminotransferase class I and II CJF59_RS03180 PF00574 Clp protease CJF59_RS03190 PF13186 Iron-sulfur cluster-binding domain CJF59_RS03190 PF04055 Radical SAM superfamily CJF59_RS03195 PF05402 Coenzyme PQQ synthesis protein D (PqqD) CJF59_RS03200 PF03070 TENA/THI-4/PQQC family CJF59_RS03205 PF12706 Beta-lactamase superfamily domain CJF59_RS03210 PF08042 PqqA family CJF59_RS03230 PF03372 Endonuclease/Exonuclease/phosphatase family CJF59_RS03235 PF01521 Iron-sulphur cluster biosynthesis CJF59_RS03240 PF01966 HD domain CJF59_RS03240 PF13286 Phosphohydrolase-associated domain CJF59_RS03245 PF00750 tRNA synthetases class I (R) CJF59_RS03245 PF05746 DALR anticodon binding domain CJF59_RS03245 PF03485 Arginyl tRNA synthetase N terminal domain CJF59_RS03255 PF02616 Segregation and condensation protein ScpA CJF59_RS03260 PF04079 Segregation and condensation complex subunit ScpB CJF59_RS03265 PF02416 mttA/Hcf106 family CJF59_RS03270 PF00902 Sec-independent protein translocase protein (TatC) CJF59_RS03275 PF02403 Seryl-tRNA synthetase N-terminal domain CJF59_RS03275 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CJF59_RS03280 PF00893 Small Multidrug Resistance protein CJF59_RS03285 PF13098 Thioredoxin-like domain CJF59_RS03285 PF02683 Cytochrome C biogenesis protein transmembrane region CJF59_RS03285 PF11412 Disulphide bond corrector protein DsbC CJF59_RS03310 PF04632 Fusaric acid resistance protein family CJF59_RS03315 PF03466 LysR substrate binding domain CJF59_RS03315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_RS03320 PF00293 NUDIX domain CJF59_RS03365 PF17762 HTH domain found in ParB protein CJF59_RS03365 PF02195 ParB-like nuclease domain CJF59_RS03425 PF01464 Transglycosylase SLT domain CJF59_RS03455 PF02534 Type IV secretory system Conjugative DNA transfer CJF59_RS03470 PF02811 PHP domain CJF59_RS03470 PF00929 Exonuclease CJF59_RS03470 PF07733 Bacterial DNA polymerase III alpha NTPase domain CJF59_RS03470 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CJF59_RS03470 PF14579 Helix-hairpin-helix motif CJF59_RS03495 PF00437 Type II/IV secretion system protein CJF59_RS03500 PF04956 TrbC/VIRB2 family CJF59_RS03530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_RS03530 PF03466 LysR substrate binding domain CJF59_RS03535 PF07729 FCD domain CJF59_RS03535 PF00392 Bacterial regulatory proteins, gntR family CJF59_RS03545 PF03466 LysR substrate binding domain CJF59_RS03545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_RS03560 PF13533 Biotin-lipoyl like CJF59_RS03565 PF02321 Outer membrane efflux protein CJF59_RS03575 PF00593 TonB dependent receptor CJF59_RS03575 PF07715 TonB-dependent Receptor Plug Domain CJF59_RS03580 PF02321 Outer membrane efflux protein CJF59_RS03585 PF13533 Biotin-lipoyl like CJF59_RS03590 PF07690 Major Facilitator Superfamily CJF59_RS03605 PF01548 Transposase CJF59_RS03605 PF02371 Transposase IS116/IS110/IS902 family CJF59_RS03610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_RS03610 PF03466 LysR substrate binding domain CJF59_RS03615 PF08021 Siderophore-interacting FAD-binding domain CJF59_RS03615 PF04954 Siderophore-interacting protein CJF59_RS03670 PF00593 TonB dependent receptor CJF59_RS03670 PF07715 TonB-dependent Receptor Plug Domain CJF59_RS03685 PF01527 Transposase CJF59_RS03700 PF13276 HTH-like domain CJF59_RS03700 PF00665 Integrase core domain CJF59_RS03700 PF13333 Integrase core domain CJF59_RS03725 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CJF59_RS03725 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CJF59_RS03730 PF12833 Helix-turn-helix domain CJF59_RS03730 PF01965 DJ-1/PfpI family CJF59_RS03735 PF04299 Putative FMN-binding domain CJF59_RS03755 PF00196 Bacterial regulatory proteins, luxR family CJF59_RS03755 PF03472 Autoinducer binding domain CJF59_RS03765 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CJF59_RS03765 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CJF59_RS03780 PF01037 Lrp/AsnC ligand binding domain CJF59_RS03810 PF00873 AcrB/AcrD/AcrF family CJF59_RS03815 PF00072 Response regulator receiver domain CJF59_RS03815 PF00486 Transcriptional regulatory protein, C terminal CJF59_RS03820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJF59_RS03820 PF00512 His Kinase A (phospho-acceptor) domain CJF59_RS03850 PF00111 2Fe-2S iron-sulfur cluster binding domain CJF59_RS03850 PF00970 Oxidoreductase FAD-binding domain CJF59_RS03850 PF00175 Oxidoreductase NAD-binding domain CJF59_RS03885 PF00132 Bacterial transferase hexapeptide (six repeats) CJF59_RS03885 PF06426 Serine acetyltransferase, N-terminal CJF59_RS03895 PF00266 Aminotransferase class-V CJF59_RS03915 PF04973 Nicotinamide mononucleotide transporter CJF59_RS03920 PF00581 Rhodanese-like domain CJF59_RS03940 PF03466 LysR substrate binding domain CJF59_RS03940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_RS03965 PF01850 PIN domain CJF59_RS03990 PF01425 Amidase CJF59_RS04010 PF03466 LysR substrate binding domain CJF59_RS04010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_RS04015 PF02678 Pirin CJF59_RS04015 PF05726 Pirin C-terminal cupin domain CJF59_RS04020 PF03358 NADPH-dependent FMN reductase CJF59_RS04030 PF07690 Major Facilitator Superfamily CJF59_RS04035 PF00171 Aldehyde dehydrogenase family CJF59_RS04045 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJF59_RS04050 PF00440 Bacterial regulatory proteins, tetR family CJF59_RS04050 PF16925 Tetracyclin repressor-like, C-terminal domain CJF59_RS04060 PF02445 Quinolinate synthetase A protein CJF59_RS04065 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CJF59_RS04065 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CJF59_RS04075 PF14403 Circularly permuted ATP-grasp type 2 CJF59_RS04085 PF15887 Putative zinc-binding metallo-peptidase CJF59_RS04085 PF10005 zinc-ribbon domain CJF59_RS04090 PF01565 FAD binding domain CJF59_RS04090 PF09330 D-lactate dehydrogenase, membrane binding CJF59_RS04095 PF00171 Aldehyde dehydrogenase family CJF59_RS04180 PF03884 DNA gyrase inhibitor YacG CJF59_RS04190 PF02545 Maf-like protein CJF59_RS04195 PF01176 Translation initiation factor 1A / IF-1 CJF59_RS04200 PF00815 Histidinol dehydrogenase CJF59_RS04205 PF01634 ATP phosphoribosyltransferase CJF59_RS04210 PF00575 S1 RNA binding domain CJF59_RS04210 PF12111 Polyribonucleotide phosphorylase C terminal CJF59_RS04210 PF10150 Ribonuclease E/G family CJF59_RS04215 PF01520 N-acetylmuramoyl-L-alanine amidase CJF59_RS04235 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJF59_RS04235 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CJF59_RS04240 PF00310 Glutamine amidotransferases class-II CJF59_RS04240 PF04898 Glutamate synthase central domain CJF59_RS04240 PF01645 Conserved region in glutamate synthase CJF59_RS04240 PF01493 GXGXG motif CJF59_RS04250 PF03109 ABC1 family CJF59_RS04260 PF02401 LytB protein CJF59_RS04265 PF01636 Phosphotransferase enzyme family CJF59_RS04270 PF00075 RNase H CJF59_RS04285 PF01513 ATP-NAD kinase CJF59_RS04305 PF02824 TGS domain CJF59_RS04305 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CJF59_RS04305 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CJF59_RS04305 PF03129 Anticodon binding domain CJF59_RS04310 PF00707 Translation initiation factor IF-3, C-terminal domain CJF59_RS04310 PF05198 Translation initiation factor IF-3, N-terminal domain CJF59_RS04320 PF00512 His Kinase A (phospho-acceptor) domain CJF59_RS04320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJF59_RS04325 PF00072 Response regulator receiver domain CJF59_RS04325 PF00486 Transcriptional regulatory protein, C terminal CJF59_RS04335 PF12848 ABC transporter CJF59_RS04335 PF00005 ABC transporter CJF59_RS04340 PF00334 Nucleoside diphosphate kinase CJF59_RS04345 PF02310 B12 binding domain CJF59_RS04345 PF04055 Radical SAM superfamily CJF59_RS04370 PF00749 tRNA synthetases class I (E and Q), catalytic domain CJF59_RS04375 PF00155 Aminotransferase class I and II CJF59_RS04380 PF00155 Aminotransferase class I and II CJF59_RS04395 PF01042 Endoribonuclease L-PSP CJF59_RS04400 PF02569 Pantoate-beta-alanine ligase CJF59_RS04405 PF02811 PHP domain CJF59_RS04405 PF14579 Helix-hairpin-helix motif CJF59_RS04405 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CJF59_RS04405 PF07733 Bacterial DNA polymerase III alpha NTPase domain CJF59_RS04410 PF04715 Anthranilate synthase component I, N terminal region CJF59_RS04410 PF00425 chorismate binding enzyme CJF59_RS04415 PF01063 Amino-transferase class IV CJF59_RS04430 PF00355 Rieske [2Fe-2S] domain CJF59_RS04435 PF00318 Ribosomal protein S2 CJF59_RS04440 PF00889 Elongation factor TS CJF59_RS04445 PF11967 Recombination protein O N terminal CJF59_RS04445 PF02565 Recombination protein O C terminal CJF59_RS04450 PF00521 DNA gyrase/topoisomerase IV, subunit A CJF59_RS04450 PF03989 DNA gyrase C-terminal domain, beta-propeller CJF59_RS04455 PF04376 Arginine-tRNA-protein transferase, N terminus CJF59_RS04455 PF04377 Arginine-tRNA-protein transferase, C terminus CJF59_RS04460 PF00490 Delta-aminolevulinic acid dehydratase CJF59_RS04465 PF13520 Amino acid permease CJF59_RS04470 PF00464 Serine hydroxymethyltransferase CJF59_RS04490 PF00270 DEAD/DEAH box helicase CJF59_RS04490 PF00271 Helicase conserved C-terminal domain CJF59_RS04515 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJF59_RS04515 PF00205 Thiamine pyrophosphate enzyme, central domain CJF59_RS04515 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJF59_RS04520 PF10369 Small subunit of acetolactate synthase CJF59_RS04525 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CJF59_RS04525 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CJF59_RS04530 PF05275 Copper resistance protein B precursor (CopB) CJF59_RS04535 PF00394 Multicopper oxidase CJF59_RS04535 PF07731 Multicopper oxidase CJF59_RS04535 PF07732 Multicopper oxidase CJF59_RS04545 PF00403 Heavy-metal-associated domain CJF59_RS04555 PF00857 Isochorismatase family CJF59_RS04560 PF00749 tRNA synthetases class I (E and Q), catalytic domain CJF59_RS04575 PF01474 Class-II DAHP synthetase family CJF59_RS04585 PF01205 Uncharacterized protein family UPF0029 CJF59_RS04595 PF03618 Kinase/pyrophosphorylase CJF59_RS04600 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CJF59_RS04600 PF02896 PEP-utilising enzyme, TIM barrel domain CJF59_RS04600 PF00391 PEP-utilising enzyme, mobile domain CJF59_RS04605 PF00533 BRCA1 C Terminus (BRCT) domain CJF59_RS04605 PF01653 NAD-dependent DNA ligase adenylation domain CJF59_RS04605 PF03120 NAD-dependent DNA ligase OB-fold domain CJF59_RS04605 PF12826 Helix-hairpin-helix motif CJF59_RS04605 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CJF59_RS04610 PF02463 RecF/RecN/SMC N terminal domain CJF59_RS04615 PF13525 Outer membrane lipoprotein CJF59_RS04620 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CJF59_RS04625 PF12327 FtsZ family, C-terminal domain CJF59_RS04625 PF00091 Tubulin/FtsZ family, GTPase domain CJF59_RS04630 PF02491 SHS2 domain inserted in FTSA CJF59_RS04635 PF03799 Cell division protein FtsQ CJF59_RS04635 PF08478 POTRA domain, FtsQ-type CJF59_RS04640 PF01820 D-ala D-ala ligase N-terminus CJF59_RS04640 PF07478 D-ala D-ala ligase C-terminus CJF59_RS04645 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CJF59_RS04645 PF01565 FAD binding domain CJF59_RS04650 PF02875 Mur ligase family, glutamate ligase domain CJF59_RS04650 PF01225 Mur ligase family, catalytic domain CJF59_RS04650 PF08245 Mur ligase middle domain CJF59_RS04655 PF04101 Glycosyltransferase family 28 C-terminal domain CJF59_RS04655 PF03033 Glycosyltransferase family 28 N-terminal domain CJF59_RS04660 PF01098 Cell cycle protein CJF59_RS04665 PF08245 Mur ligase middle domain CJF59_RS04665 PF02875 Mur ligase family, glutamate ligase domain CJF59_RS04670 PF00953 Glycosyl transferase family 4 CJF59_RS04670 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CJF59_RS04675 PF08245 Mur ligase middle domain CJF59_RS04675 PF02875 Mur ligase family, glutamate ligase domain CJF59_RS04675 PF01225 Mur ligase family, catalytic domain CJF59_RS04680 PF02875 Mur ligase family, glutamate ligase domain CJF59_RS04680 PF08245 Mur ligase middle domain CJF59_RS04680 PF01225 Mur ligase family, catalytic domain CJF59_RS04685 PF00905 Penicillin binding protein transpeptidase domain CJF59_RS04685 PF03717 Penicillin-binding Protein dimerisation domain CJF59_RS04695 PF01795 MraW methylase family CJF59_RS04700 PF02381 MraZ protein, putative antitoxin-like CJF59_RS04710 PF07859 alpha/beta hydrolase fold CJF59_RS04720 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CJF59_RS04720 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CJF59_RS04725 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) CJF59_RS04735 PF01472 PUA domain CJF59_RS04735 PF00696 Amino acid kinase family CJF59_RS04740 PF01018 GTP1/OBG CJF59_RS04740 PF01926 50S ribosome-binding GTPase CJF59_RS04745 PF01016 Ribosomal L27 protein CJF59_RS04750 PF00829 Ribosomal prokaryotic L21 protein CJF59_RS04760 PF02796 Helix-turn-helix domain of resolvase CJF59_RS04760 PF00239 Resolvase, N terminal domain CJF59_RS04780 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CJF59_RS04795 PF07859 alpha/beta hydrolase fold CJF59_RS04810 PF00860 Permease family CJF59_RS04825 PF03358 NADPH-dependent FMN reductase CJF59_RS04830 PF00355 Rieske [2Fe-2S] domain CJF59_RS04830 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CJF59_RS04835 PF00033 Cytochrome b/b6/petB CJF59_RS04835 PF00032 Cytochrome b(C-terminal)/b6/petD CJF59_RS04835 PF02167 Cytochrome C1 family CJF59_RS04840 PF00033 Cytochrome b/b6/petB CJF59_RS04840 PF02167 Cytochrome C1 family CJF59_RS04840 PF00032 Cytochrome b(C-terminal)/b6/petD CJF59_RS04845 PF01872 RibD C-terminal domain CJF59_RS04845 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CJF59_RS04850 PF00677 Lumazine binding domain CJF59_RS04855 PF00925 GTP cyclohydrolase II CJF59_RS04855 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CJF59_RS04860 PF00885 6,7-dimethyl-8-ribityllumazine synthase CJF59_RS04890 PF13533 Biotin-lipoyl like CJF59_RS04920 PF00994 Probable molybdopterin binding domain CJF59_RS04930 PF01227 GTP cyclohydrolase I CJF59_RS04935 PF04379 ApaG domain CJF59_RS04940 PF01053 Cys/Met metabolism PLP-dependent enzyme CJF59_RS04945 PF01050 Mannose-6-phosphate isomerase CJF59_RS04945 PF00483 Nucleotidyl transferase CJF59_RS04950 PF00293 NUDIX domain CJF59_RS04955 PF00355 Rieske [2Fe-2S] domain CJF59_RS04965 PF02699 Preprotein translocase subunit CJF59_RS04970 PF17764 3′ DNA-binding domain (3′BD) CJF59_RS04970 PF00270 DEAD/DEAH box helicase CJF59_RS04970 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CJF59_RS04970 PF18074 Primosomal protein N C-terminal domain CJF59_RS04975 PF00589 Phage integrase family CJF59_RS04975 PF02899 Phage integrase, N-terminal SAM-like domain CJF59_RS04980 PF00561 alpha/beta hydrolase fold CJF59_RS04995 PF00909 Ammonium Transporter Family CJF59_RS05005 PF16363 GDP-mannose 4,6 dehydratase CJF59_RS05010 PF01370 NAD dependent epimerase/dehydratase family CJF59_RS05045 PF00118 TCP-1/cpn60 chaperonin family CJF59_RS05050 PF00166 Chaperonin 10 Kd subunit CJF59_RS05055 PF01738 Dienelactone hydrolase family CJF59_RS05060 PF00313 'Cold-shock' DNA-binding domain CJF59_RS05065 PF13307 Helicase C-terminal domain CJF59_RS05065 PF04851 Type III restriction enzyme, res subunit CJF59_RS05070 PF00459 Inositol monophosphatase family CJF59_RS05075 PF08207 Elongation factor P (EF-P) KOW-like domain CJF59_RS05075 PF09285 Elongation factor P, C-terminal CJF59_RS05075 PF01132 Elongation factor P (EF-P) OB domain CJF59_RS05085 PF01050 Mannose-6-phosphate isomerase CJF59_RS05085 PF00483 Nucleotidyl transferase CJF59_RS05090 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CJF59_RS05090 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CJF59_RS05090 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CJF59_RS05090 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CJF59_RS05095 PF09335 SNARE associated Golgi protein CJF59_RS05100 PF01494 FAD binding domain CJF59_RS05105 PF00132 Bacterial transferase hexapeptide (six repeats) CJF59_RS05105 PF06426 Serine acetyltransferase, N-terminal CJF59_RS05110 PF00543 Nitrogen regulatory protein P-II CJF59_RS05115 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CJF59_RS05115 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CJF59_RS05115 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CJF59_RS05145 PF00156 Phosphoribosyl transferase domain CJF59_RS05170 PF03275 UDP-galactopyranose mutase CJF59_RS05185 PF00535 Glycosyl transferase family 2 CJF59_RS05190 PF02542 YgbB family CJF59_RS05190 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CJF59_RS05195 PF01207 Dihydrouridine synthase (Dus) CJF59_RS05200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJF59_RS05200 PF00512 His Kinase A (phospho-acceptor) domain CJF59_RS05200 PF00989 PAS fold CJF59_RS05205 PF00158 Sigma-54 interaction domain CJF59_RS05205 PF00072 Response regulator receiver domain CJF59_RS05205 PF02954 Bacterial regulatory protein, Fis family CJF59_RS05210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJF59_RS05210 PF00672 HAMP domain CJF59_RS05215 PF02954 Bacterial regulatory protein, Fis family CJF59_RS05215 PF00072 Response regulator receiver domain CJF59_RS05215 PF00158 Sigma-54 interaction domain CJF59_RS05220 PF17209 Hfq protein CJF59_RS05225 PF16360 GTP-binding GTPase Middle Region CJF59_RS05225 PF13167 GTP-binding GTPase N-terminal CJF59_RS05225 PF01926 50S ribosome-binding GTPase CJF59_RS05230 PF00293 NUDIX domain CJF59_RS05235 PF07724 AAA domain (Cdc48 subfamily) CJF59_RS05235 PF00004 ATPase family associated with various cellular activities (AAA) CJF59_RS05235 PF02861 Clp amino terminal domain, pathogenicity island component CJF59_RS05235 PF10431 C-terminal, D2-small domain, of ClpB protein CJF59_RS05235 PF17871 AAA lid domain CJF59_RS05240 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CJF59_RS05240 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CJF59_RS05260 PF01794 Ferric reductase like transmembrane component CJF59_RS05265 PF01740 STAS domain CJF59_RS05265 PF00916 Sulfate permease family CJF59_RS05270 PF02684 Lipid-A-disaccharide synthetase CJF59_RS05275 PF01502 Phosphoribosyl-AMP cyclohydrolase CJF59_RS05285 PF13537 Glutamine amidotransferase domain CJF59_RS05285 PF00733 Asparagine synthase CJF59_RS05290 PF00534 Glycosyl transferases group 1 CJF59_RS05290 PF13439 Glycosyltransferase Family 4 CJF59_RS05310 PF13360 PQQ-like domain CJF59_RS05315 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CJF59_RS05315 PF01926 50S ribosome-binding GTPase CJF59_RS05320 PF07690 Major Facilitator Superfamily CJF59_RS05325 PF04107 Glutamate-cysteine ligase family 2(GCS2) CJF59_RS05330 PF04452 RNA methyltransferase CJF59_RS05335 PF01040 UbiA prenyltransferase family CJF59_RS05345 PF16193 AAA C-terminal domain CJF59_RS05345 PF00004 ATPase family associated with various cellular activities (AAA) CJF59_RS05345 PF12002 MgsA AAA+ ATPase C terminal CJF59_RS05350 PF00849 RNA pseudouridylate synthase CJF59_RS05350 PF01479 S4 domain CJF59_RS05370 PF00448 SRP54-type protein, GTPase domain CJF59_RS05370 PF02978 Signal peptide binding domain CJF59_RS05370 PF02881 SRP54-type protein, helical bundle domain CJF59_RS05375 PF00886 Ribosomal protein S16 CJF59_RS05380 PF01782 RimM N-terminal domain CJF59_RS05385 PF01746 tRNA (Guanine-1)-methyltransferase CJF59_RS05390 PF01245 Ribosomal protein L19 CJF59_RS05395 PF00330 Aconitase family (aconitate hydratase) CJF59_RS05400 PF00694 Aconitase C-terminal domain CJF59_RS05405 PF00180 Isocitrate/isopropylmalate dehydrogenase CJF59_RS05410 PF01165 Ribosomal protein S21 CJF59_RS05415 PF01327 Polypeptide deformylase CJF59_RS05425 PF12802 MarR family CJF59_RS05430 PF00486 Transcriptional regulatory protein, C terminal CJF59_RS05430 PF00072 Response regulator receiver domain CJF59_RS05435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJF59_RS05435 PF00512 His Kinase A (phospho-acceptor) domain CJF59_RS05435 PF00672 HAMP domain CJF59_RS05450 PF01783 Ribosomal L32p protein family CJF59_RS05455 PF02504 Fatty acid synthesis protein CJF59_RS05460 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CJF59_RS05460 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CJF59_RS05465 PF00216 Bacterial DNA-binding protein CJF59_RS05470 PF13411 MerR HTH family regulatory protein CJF59_RS05485 PF03023 Lipid II flippase MurJ CJF59_RS05495 PF00216 Bacterial DNA-binding protein CJF59_RS05500 PF05443 ROS/MUCR transcriptional regulator protein CJF59_RS05505 PF03466 LysR substrate binding domain CJF59_RS05505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_RS05510 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJF59_RS05515 PF01037 Lrp/AsnC ligand binding domain CJF59_RS05520 PF00535 Glycosyl transferase family 2 CJF59_RS05530 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CJF59_RS05530 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CJF59_RS05540 PF01209 ubiE/COQ5 methyltransferase family CJF59_RS05545 PF00115 Cytochrome C and Quinol oxidase polypeptide I CJF59_RS05550 PF01040 UbiA prenyltransferase family CJF59_RS05565 PF01523 Putative modulator of DNA gyrase CJF59_RS05570 PF05193 Peptidase M16 inactive domain CJF59_RS05570 PF00675 Insulinase (Peptidase family M16) CJF59_RS05575 PF00291 Pyridoxal-phosphate dependent enzyme CJF59_RS05575 PF14821 Threonine synthase N terminus CJF59_RS05585 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CJF59_RS05595 PF05192 MutS domain III CJF59_RS05595 PF01624 MutS domain I CJF59_RS05595 PF05190 MutS family domain IV CJF59_RS05595 PF00488 MutS domain V CJF59_RS05595 PF05188 MutS domain II CJF59_RS05600 PF01966 HD domain CJF59_RS05600 PF08335 GlnD PII-uridylyltransferase CJF59_RS05610 PF00664 ABC transporter transmembrane region CJF59_RS05610 PF00005 ABC transporter CJF59_RS05620 PF00830 Ribosomal L28 family CJF59_RS05630 PF14492 Elongation Factor G, domain II CJF59_RS05630 PF00679 Elongation factor G C-terminus CJF59_RS05630 PF00009 Elongation factor Tu GTP binding domain CJF59_RS05630 PF03144 Elongation factor Tu domain 2 CJF59_RS05630 PF03764 Elongation factor G, domain IV CJF59_RS05640 PF00311 Phosphoenolpyruvate carboxylase CJF59_RS05645 PF04286 Protein of unknown function (DUF445) CJF59_RS05655 PF01458 Uncharacterized protein family (UPF0051) CJF59_RS05660 PF00005 ABC transporter CJF59_RS05665 PF01458 Uncharacterized protein family (UPF0051) CJF59_RS05670 PF00266 Aminotransferase class-V CJF59_RS05680 PF01883 Iron-sulfur cluster assembly protein CJF59_RS05685 PF01521 Iron-sulphur cluster biosynthesis CJF59_RS05690 PF05958 tRNA (Uracil-5-)-methyltransferase CJF59_RS05695 PF00271 Helicase conserved C-terminal domain CJF59_RS05695 PF00270 DEAD/DEAH box helicase CJF59_RS05705 PF01256 Carbohydrate kinase CJF59_RS05705 PF03853 YjeF-related protein N-terminus CJF59_RS05715 PF05697 Bacterial trigger factor protein (TF) CJF59_RS05715 PF05698 Bacterial trigger factor protein (TF) C-terminus CJF59_RS05715 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CJF59_RS05720 PF00574 Clp protease CJF59_RS05725 PF06689 ClpX C4-type zinc finger CJF59_RS05725 PF10431 C-terminal, D2-small domain, of ClpB protein CJF59_RS05725 PF07724 AAA domain (Cdc48 subfamily) CJF59_RS05730 PF00004 ATPase family associated with various cellular activities (AAA) CJF59_RS05730 PF05362 Lon protease (S16) C-terminal proteolytic domain CJF59_RS05730 PF02190 ATP-dependent protease La (LON) substrate-binding domain CJF59_RS05735 PF00216 Bacterial DNA-binding protein CJF59_RS05745 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CJF59_RS05750 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CJF59_RS05755 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CJF59_RS05760 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CJF59_RS05770 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CJF59_RS05770 PF10531 SLBB domain CJF59_RS05770 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CJF59_RS05775 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CJF59_RS05775 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal CJF59_RS05775 PF00384 Molybdopterin oxidoreductase CJF59_RS05780 PF00146 NADH dehydrogenase CJF59_RS05785 PF12838 4Fe-4S dicluster domain CJF59_RS05790 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CJF59_RS05795 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CJF59_RS05800 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CJF59_RS05800 PF00361 Proton-conducting membrane transporter CJF59_RS05805 PF00361 Proton-conducting membrane transporter CJF59_RS05810 PF03099 Biotin/lipoate A/B protein ligase family CJF59_RS05810 PF02237 Biotin protein ligase C terminal domain CJF59_RS05815 PF03309 Type III pantothenate kinase CJF59_RS05820 PF17770 Ribonuclease J C-terminal domain CJF59_RS05820 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CJF59_RS05820 PF12706 Beta-lactamase superfamily domain CJF59_RS05825 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CJF59_RS05825 PF03129 Anticodon binding domain CJF59_RS05830 PF12704 MacB-like periplasmic core domain CJF59_RS05830 PF02687 FtsX-like permease family CJF59_RS05835 PF00005 ABC transporter CJF59_RS05840 PF00255 Glutathione peroxidase CJF59_RS05855 PF01380 SIS domain CJF59_RS05860 PF12804 MobA-like NTP transferase domain CJF59_RS05860 PF00132 Bacterial transferase hexapeptide (six repeats) CJF59_RS05860 PF14602 Hexapeptide repeat of succinyl-transferase CJF59_RS05865 PF13419 Haloacid dehalogenase-like hydrolase CJF59_RS05890 PF00149 Calcineurin-like phosphoesterase CJF59_RS05905 PF00155 Aminotransferase class I and II CJF59_RS05915 PF00501 AMP-binding enzyme CJF59_RS05955 PF01799 [2Fe-2S] binding domain CJF59_RS05955 PF00111 2Fe-2S iron-sulfur cluster binding domain CJF59_RS05970 PF00248 Aldo/keto reductase family CJF59_RS05975 PF00248 Aldo/keto reductase family CJF59_RS05980 PF03466 LysR substrate binding domain CJF59_RS05980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_RS05985 PF03358 NADPH-dependent FMN reductase CJF59_RS05995 PF07690 Major Facilitator Superfamily CJF59_RS06000 PF00106 short chain dehydrogenase CJF59_RS06005 PF04237 YjbR CJF59_RS06015 PF07690 Major Facilitator Superfamily CJF59_RS06020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_RS06020 PF03466 LysR substrate binding domain CJF59_RS06025 PF09278 MerR, DNA binding CJF59_RS06025 PF00376 MerR family regulatory protein CJF59_RS06035 PF00873 AcrB/AcrD/AcrF family CJF59_RS06045 PF02321 Outer membrane efflux protein CJF59_RS06065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_RS06065 PF03466 LysR substrate binding domain CJF59_RS06070 PF02219 Methylenetetrahydrofolate reductase CJF59_RS06075 PF02677 Epoxyqueuosine reductase QueH CJF59_RS06080 PF01717 Cobalamin-independent synthase, Catalytic domain CJF59_RS06080 PF08267 Cobalamin-independent synthase, N-terminal domain CJF59_RS06105 PF18019 HD domain CJF59_RS06105 PF00271 Helicase conserved C-terminal domain CJF59_RS06105 PF00270 DEAD/DEAH box helicase CJF59_RS06120 PF09344 CT1975-like protein CJF59_RS06125 PF09704 CRISPR-associated protein (Cas_Cas5) CJF59_RS06135 PF01867 CRISPR associated protein Cas1 CJF59_RS06140 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) CJF59_RS06145 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CJF59_RS06160 PF07690 Major Facilitator Superfamily CJF59_RS06175 PF00107 Zinc-binding dehydrogenase CJF59_RS06175 PF08240 Alcohol dehydrogenase GroES-like domain CJF59_RS06180 PF00593 TonB dependent receptor CJF59_RS06180 PF07715 TonB-dependent Receptor Plug Domain CJF59_RS06195 PF12848 ABC transporter CJF59_RS06195 PF00005 ABC transporter CJF59_RS06210 PF06826 Predicted Permease Membrane Region CJF59_RS06210 PF02080 TrkA-C domain CJF59_RS06215 PF00155 Aminotransferase class I and II CJF59_RS06220 PF17763 Glutaminase/Asparaginase C-terminal domain CJF59_RS06220 PF00710 Asparaginase, N-terminal CJF59_RS06235 PF00593 TonB dependent receptor CJF59_RS06235 PF07715 TonB-dependent Receptor Plug Domain CJF59_RS06240 PF18331 PKHD-type hydroxylase C-terminal domain CJF59_RS06240 PF13640 2OG-Fe(II) oxygenase superfamily CJF59_RS06245 PF00005 ABC transporter CJF59_RS06245 PF00664 ABC transporter transmembrane region CJF59_RS06250 PF00005 ABC transporter CJF59_RS06250 PF00664 ABC transporter transmembrane region CJF59_RS06255 PF01654 Cytochrome bd terminal oxidase subunit I CJF59_RS06260 PF02322 Cytochrome bd terminal oxidase subunit II CJF59_RS06270 PF07995 Glucose / Sorbosone dehydrogenase CJF59_RS06275 PF00924 Mechanosensitive ion channel CJF59_RS06275 PF05552 Conserved TM helix CJF59_RS06280 PF07715 TonB-dependent Receptor Plug Domain CJF59_RS06280 PF00593 TonB dependent receptor CJF59_RS06290 PF13282 Domain of unknown function (DUF4070) CJF59_RS06290 PF04055 Radical SAM superfamily CJF59_RS06290 PF02310 B12 binding domain CJF59_RS06300 PF03551 Transcriptional regulator PadR-like family CJF59_RS06320 PF05506 Domain of unknown function (DUF756) CJF59_RS06320 PF04185 Phosphoesterase family CJF59_RS06330 PF01569 PAP2 superfamily CJF59_RS06335 PF03060 Nitronate monooxygenase CJF59_RS06340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJF59_RS06340 PF00005 ABC transporter CJF59_RS06345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJF59_RS06345 PF00005 ABC transporter CJF59_RS06350 PF00528 Binding-protein-dependent transport system inner membrane component CJF59_RS06355 PF00528 Binding-protein-dependent transport system inner membrane component CJF59_RS06355 PF12911 N-terminal TM domain of oligopeptide transport permease C CJF59_RS06360 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJF59_RS06365 PF00571 CBS domain CJF59_RS06365 PF00478 IMP dehydrogenase / GMP reductase domain CJF59_RS06370 PF01189 16S rRNA methyltransferase RsmB/F CJF59_RS06370 PF01029 NusB family CJF59_RS06385 PF00072 Response regulator receiver domain CJF59_RS06385 PF00486 Transcriptional regulatory protein, C terminal CJF59_RS06400 PF00579 tRNA synthetases class I (W and Y) CJF59_RS06410 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CJF59_RS06410 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CJF59_RS06415 PF00764 Arginosuccinate synthase CJF59_RS06420 PF04055 Radical SAM superfamily CJF59_RS06430 PF01479 S4 domain CJF59_RS06430 PF01728 FtsJ-like methyltransferase CJF59_RS06435 PF02779 Transketolase, pyrimidine binding domain CJF59_RS06435 PF02780 Transketolase, C-terminal domain CJF59_RS06435 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CJF59_RS06440 PF00348 Polyprenyl synthetase CJF59_RS06445 PF02609 Exonuclease VII small subunit CJF59_RS06450 PF01206 Sulfurtransferase TusA CJF59_RS06455 PF00480 ROK family CJF59_RS06460 PF01728 FtsJ-like methyltransferase CJF59_RS06465 PF02541 Ppx/GppA phosphatase family CJF59_RS06475 PF01568 Molydopterin dinucleotide binding domain CJF59_RS06475 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CJF59_RS06475 PF00384 Molybdopterin oxidoreductase CJF59_RS06480 PF13247 4Fe-4S dicluster domain CJF59_RS06480 PF09163 Formate dehydrogenase N, transmembrane CJF59_RS06485 PF01292 Prokaryotic cytochrome b561 CJF59_RS06490 PF04216 Protein involved in formate dehydrogenase formation CJF59_RS06495 PF03453 MoeA N-terminal region (domain I and II) CJF59_RS06495 PF03454 MoeA C-terminal region (domain IV) CJF59_RS06495 PF00994 Probable molybdopterin binding domain CJF59_RS06500 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CJF59_RS06505 PF12804 MobA-like NTP transferase domain CJF59_RS06510 PF02634 FdhD/NarQ family CJF59_RS06515 PF14497 Glutathione S-transferase, C-terminal domain CJF59_RS06515 PF02798 Glutathione S-transferase, N-terminal domain CJF59_RS06520 PF02659 Putative manganese efflux pump CJF59_RS06530 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CJF59_RS06530 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJF59_RS06535 PF10371 Domain of unknown function CJF59_RS06535 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CJF59_RS06535 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CJF59_RS06535 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CJF59_RS06535 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJF59_RS06540 PF01180 Dihydroorotate dehydrogenase CJF59_RS06545 PF01515 Phosphate acetyl/butaryl transferase CJF59_RS06550 PF00871 Acetokinase family CJF59_RS06560 PF01594 AI-2E family transporter CJF59_RS06600 PF01011 PQQ enzyme repeat CJF59_RS06610 PF00158 Sigma-54 interaction domain CJF59_RS06610 PF02830 V4R domain CJF59_RS06610 PF06505 Activator of aromatic catabolism CJF59_RS06610 PF02954 Bacterial regulatory protein, Fis family CJF59_RS06620 PF10415 Fumarase C C-terminus CJF59_RS06620 PF00206 Lyase CJF59_RS06630 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CJF59_RS06635 PF02570 Precorrin-8X methylmutase CJF59_RS06640 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJF59_RS06645 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJF59_RS06650 PF02571 Precorrin-6x reductase CbiJ/CobK CJF59_RS06655 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJF59_RS06665 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJF59_RS06670 PF01888 CbiD CJF59_RS06675 PF07690 Major Facilitator Superfamily CJF59_RS06680 PF04399 Glutaredoxin 2, C terminal domain CJF59_RS06680 PF13417 Glutathione S-transferase, N-terminal domain CJF59_RS06685 PF05724 Thiopurine S-methyltransferase (TPMT) CJF59_RS06690 PF00375 Sodium:dicarboxylate symporter family CJF59_RS06695 PF17755 UvrA DNA-binding domain CJF59_RS06730 PF02069 Prokaryotic metallothionein CJF59_RS06735 PF01022 Bacterial regulatory protein, arsR family CJF59_RS06740 PF00005 ABC transporter CJF59_RS06740 PF06472 ABC transporter transmembrane region 2 CJF59_RS06745 PF03129 Anticodon binding domain CJF59_RS06745 PF02824 TGS domain CJF59_RS06745 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CJF59_RS06745 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CJF59_RS06750 PF01475 Ferric uptake regulator family CJF59_RS06765 PF01502 Phosphoribosyl-AMP cyclohydrolase CJF59_RS06770 PF02492 CobW/HypB/UreG, nucleotide-binding domain CJF59_RS06770 PF07683 Cobalamin synthesis protein cobW C-terminal domain CJF59_RS06775 PF00107 Zinc-binding dehydrogenase CJF59_RS06775 PF08240 Alcohol dehydrogenase GroES-like domain CJF59_RS06780 PF00132 Bacterial transferase hexapeptide (six repeats) CJF59_RS06810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_RS06810 PF03466 LysR substrate binding domain CJF59_RS06815 PF00440 Bacterial regulatory proteins, tetR family CJF59_RS06820 PF00248 Aldo/keto reductase family CJF59_RS06845 PF07690 Major Facilitator Superfamily CJF59_RS06855 PF00593 TonB dependent receptor CJF59_RS06855 PF07715 TonB-dependent Receptor Plug Domain CJF59_RS06865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_RS06865 PF03466 LysR substrate binding domain CJF59_RS06890 PF07690 Major Facilitator Superfamily CJF59_RS06900 PF12833 Helix-turn-helix domain CJF59_RS06900 PF01965 DJ-1/PfpI family CJF59_RS06910 PF00905 Penicillin binding protein transpeptidase domain CJF59_RS06910 PF00912 Transglycosylase CJF59_RS06910 PF06832 Penicillin-Binding Protein C-terminus Family CJF59_RS06915 PF11974 Bacterial alpha-2-macroglobulin MG3 domain CJF59_RS06915 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain CJF59_RS06915 PF07703 Alpha-2-macroglobulin bait region domain CJF59_RS06915 PF00207 Alpha-2-macroglobulin family CJF59_RS06915 PF01835 MG2 domain CJF59_RS06915 PF17962 Bacterial macroglobulin domain 6 CJF59_RS06915 PF07678 A-macroglobulin TED domain CJF59_RS06915 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain CJF59_RS06915 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain CJF59_RS06945 PF07859 alpha/beta hydrolase fold CJF59_RS06960 PF07715 TonB-dependent Receptor Plug Domain CJF59_RS06960 PF00593 TonB dependent receptor CJF59_RS06985 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CJF59_RS06995 PF00528 Binding-protein-dependent transport system inner membrane component CJF59_RS07000 PF00005 ABC transporter CJF59_RS07005 PF09084 NMT1/THI5 like CJF59_RS07010 PF04545 Sigma-70, region 4 CJF59_RS07010 PF04539 Sigma-70 region 3 CJF59_RS07010 PF04542 Sigma-70 region 2 CJF59_RS07020 PF00593 TonB dependent receptor CJF59_RS07020 PF07715 TonB-dependent Receptor Plug Domain CJF59_RS07035 PF07715 TonB-dependent Receptor Plug Domain CJF59_RS07035 PF00593 TonB dependent receptor CJF59_RS07050 PF01618 MotA/TolQ/ExbB proton channel family CJF59_RS07055 PF02472 Biopolymer transport protein ExbD/TolR CJF59_RS07070 PF01566 Natural resistance-associated macrophage protein CJF59_RS07075 PF02742 Iron dependent repressor, metal binding and dimerisation domain CJF59_RS07075 PF01325 Iron dependent repressor, N-terminal DNA binding domain CJF59_RS07085 PF01497 Periplasmic binding protein CJF59_RS07090 PF01032 FecCD transport family CJF59_RS07095 PF00005 ABC transporter CJF59_RS07105 PF01126 Heme oxygenase CJF59_RS07110 PF00593 TonB dependent receptor CJF59_RS07110 PF07715 TonB-dependent Receptor Plug Domain CJF59_RS07115 PF00881 Nitroreductase family CJF59_RS07120 PF02770 Acyl-CoA dehydrogenase, middle domain CJF59_RS07120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJF59_RS07120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJF59_RS07130 PF00296 Luciferase-like monooxygenase CJF59_RS07135 PF13087 AAA domain CJF59_RS07135 PF13086 AAA domain CJF59_RS07135 PF13087 AAA domain CJF59_RS07135 PF13195 Protein of unknown function (DUF4011) CJF59_RS07135 PF13086 AAA domain CJF59_RS07135 PF13195 Protein of unknown function (DUF4011) CJF59_RS07140 PF07859 alpha/beta hydrolase fold CJF59_RS07145 PF01425 Amidase CJF59_RS07150 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CJF59_RS07150 PF00364 Biotin-requiring enzyme CJF59_RS07150 PF00289 Biotin carboxylase, N-terminal domain CJF59_RS07150 PF02785 Biotin carboxylase C-terminal domain CJF59_RS07155 PF09347 Domain of unknown function (DUF1989) CJF59_RS07160 PF09347 Domain of unknown function (DUF1989) CJF59_RS07165 PF01402 Ribbon-helix-helix protein, copG family CJF59_RS07165 PF08753 NikR C terminal nickel binding domain CJF59_RS07170 PF00005 ABC transporter CJF59_RS07175 PF00528 Binding-protein-dependent transport system inner membrane component CJF59_RS07185 PF01979 Amidohydrolase family CJF59_RS07185 PF13382 Adenine deaminase C-terminal domain CJF59_RS07190 PF07690 Major Facilitator Superfamily CJF59_RS07230 PF00873 AcrB/AcrD/AcrF family CJF59_RS07235 PF02321 Outer membrane efflux protein CJF59_RS07240 PF00012 Hsp70 protein CJF59_RS07255 PF00005 ABC transporter CJF59_RS07255 PF06472 ABC transporter transmembrane region 2 CJF59_RS07260 PF00593 TonB dependent receptor CJF59_RS07260 PF07715 TonB-dependent Receptor Plug Domain CJF59_RS07275 PF08543 Phosphomethylpyrimidine kinase CJF59_RS07280 PF00583 Acetyltransferase (GNAT) family CJF59_RS07285 PF13382 Adenine deaminase C-terminal domain CJF59_RS07285 PF01979 Amidohydrolase family CJF59_RS07290 PF06165 Glycosyltransferase family 36 CJF59_RS07290 PF10091 Putative glucoamylase CJF59_RS07290 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain CJF59_RS07300 PF00472 RF-1 domain CJF59_RS07305 PF06628 Catalase-related immune-responsive CJF59_RS07305 PF00199 Catalase CJF59_RS07305 PF18011 C-terminal domain found in long catalases CJF59_RS07310 PF06965 Na+/H+ antiporter 1 CJF59_RS07330 PF13243 Squalene-hopene cyclase C-terminal domain CJF59_RS07330 PF13249 Squalene-hopene cyclase N-terminal domain CJF59_RS07350 PF00005 ABC transporter CJF59_RS07355 PF13533 Biotin-lipoyl like CJF59_RS07375 PF01618 MotA/TolQ/ExbB proton channel family CJF59_RS07380 PF02472 Biopolymer transport protein ExbD/TolR CJF59_RS07385 PF02472 Biopolymer transport protein ExbD/TolR CJF59_RS07395 PF01979 Amidohydrolase family CJF59_RS07405 PF13454 FAD-NAD(P)-binding CJF59_RS07420 PF00576 HIUase/Transthyretin family CJF59_RS07425 PF00860 Permease family CJF59_RS07430 PF00111 2Fe-2S iron-sulfur cluster binding domain CJF59_RS07430 PF01799 [2Fe-2S] binding domain CJF59_RS07435 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CJF59_RS07435 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CJF59_RS07445 PF01425 Amidase CJF59_RS07460 PF00266 Aminotransferase class-V CJF59_RS07465 PF01546 Peptidase family M20/M25/M40 CJF59_RS07465 PF07687 Peptidase dimerisation domain CJF59_RS07470 PF00593 TonB dependent receptor CJF59_RS07470 PF07715 TonB-dependent Receptor Plug Domain CJF59_RS07475 PF01979 Amidohydrolase family CJF59_RS07490 PF00005 ABC transporter CJF59_RS07505 PF01979 Amidohydrolase family CJF59_RS07510 PF02567 Phenazine biosynthesis-like protein CJF59_RS07525 PF08274 PhnA Zinc-Ribbon CJF59_RS07525 PF03831 PhnA domain CJF59_RS07530 PF08240 Alcohol dehydrogenase GroES-like domain CJF59_RS07530 PF00107 Zinc-binding dehydrogenase CJF59_RS07535 PF01204 Trehalase CJF59_RS07540 PF00005 ABC transporter CJF59_RS07540 PF16326 ABC transporter C-terminal domain CJF59_RS07545 PF00072 Response regulator receiver domain CJF59_RS07550 PF08281 Sigma-70, region 4 CJF59_RS07550 PF04542 Sigma-70 region 2 CJF59_RS07555 PF08281 Sigma-70, region 4 CJF59_RS07555 PF04542 Sigma-70 region 2 CJF59_RS07565 PF12282 Signal transduction histidine kinase CJF59_RS07565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJF59_RS07565 PF07568 Histidine kinase CJF59_RS07570 PF00664 ABC transporter transmembrane region CJF59_RS07570 PF00005 ABC transporter CJF59_RS07575 PF00005 ABC transporter CJF59_RS07575 PF00664 ABC transporter transmembrane region CJF59_RS07585 PF00270 DEAD/DEAH box helicase CJF59_RS07585 PF16124 RecQ zinc-binding CJF59_RS07585 PF00271 Helicase conserved C-terminal domain CJF59_RS07585 PF09382 RQC domain CJF59_RS07585 PF00570 HRDC domain CJF59_RS07590 PF00455 DeoR C terminal sensor domain CJF59_RS07590 PF08220 DeoR-like helix-turn-helix domain CJF59_RS07595 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CJF59_RS07595 PF01266 FAD dependent oxidoreductase CJF59_RS07600 PF00230 Major intrinsic protein CJF59_RS07605 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CJF59_RS07605 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CJF59_RS07615 PF03477 ATP cone domain CJF59_RS07620 PF01029 NusB family CJF59_RS07625 PF00586 AIR synthase related protein, N-terminal domain CJF59_RS07625 PF02769 AIR synthase related protein, C-terminal domain CJF59_RS07665 PF02321 Outer membrane efflux protein CJF59_RS07675 PF10458 Valyl tRNA synthetase tRNA binding arm CJF59_RS07675 PF08264 Anticodon-binding domain of tRNA CJF59_RS07675 PF00133 tRNA synthetases class I (I, L, M and V) CJF59_RS07680 PF01625 Peptide methionine sulfoxide reductase CJF59_RS07685 PF00005 ABC transporter CJF59_RS07690 PF00528 Binding-protein-dependent transport system inner membrane component CJF59_RS07695 PF00692 dUTPase CJF59_RS07700 PF04127 DNA / pantothenate metabolism flavoprotein CJF59_RS07700 PF02441 Flavoprotein CJF59_RS07705 PF01209 ubiE/COQ5 methyltransferase family CJF59_RS07710 PF06827 Zinc finger found in FPG and IleRS CJF59_RS07710 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CJF59_RS07710 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CJF59_RS07715 PF01649 Ribosomal protein S20 CJF59_RS07720 PF11638 DnaA N-terminal domain CJF59_RS07720 PF00308 Bacterial dnaA protein CJF59_RS07720 PF08299 Bacterial dnaA protein helix-turn-helix CJF59_RS07725 PF02768 DNA polymerase III beta subunit, C-terminal domain CJF59_RS07725 PF02767 DNA polymerase III beta subunit, central domain CJF59_RS07725 PF00712 DNA polymerase III beta subunit, N-terminal domain CJF59_RS07730 PF02463 RecF/RecN/SMC N terminal domain CJF59_RS07735 PF00986 DNA gyrase B subunit, carboxyl terminus CJF59_RS07735 PF00204 DNA gyrase B CJF59_RS07735 PF01751 Toprim domain CJF59_RS07735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJF59_RS07740 PF00793 DAHP synthetase I family CJF59_RS07745 PF06418 CTP synthase N-terminus CJF59_RS07745 PF00117 Glutamine amidotransferase class-I CJF59_RS07755 PF00121 Triosephosphate isomerase CJF59_RS07765 PF04715 Anthranilate synthase component I, N terminal region CJF59_RS07765 PF00425 chorismate binding enzyme CJF59_RS07770 PF00117 Glutamine amidotransferase class-I CJF59_RS07775 PF00591 Glycosyl transferase family, a/b domain CJF59_RS07775 PF02885 Glycosyl transferase family, helical bundle domain CJF59_RS07780 PF00218 Indole-3-glycerol phosphate synthase CJF59_RS07785 PF01967 MoaC family CJF59_RS07790 PF00676 Dehydrogenase E1 component CJF59_RS07795 PF02780 Transketolase, C-terminal domain CJF59_RS07795 PF00364 Biotin-requiring enzyme CJF59_RS07795 PF02779 Transketolase, pyrimidine binding domain CJF59_RS07800 PF00364 Biotin-requiring enzyme CJF59_RS07800 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CJF59_RS07800 PF02817 e3 binding domain CJF59_RS07805 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CJF59_RS07805 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJF59_RS07810 PF04055 Radical SAM superfamily CJF59_RS07825 PF02464 Competence-damaged protein CJF59_RS07835 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CJF59_RS07835 PF01464 Transglycosylase SLT domain CJF59_RS07840 PF03741 Integral membrane protein TerC family CJF59_RS07845 PF10397 Adenylosuccinate lyase C-terminus CJF59_RS07845 PF00206 Lyase CJF59_RS07850 PF01259 SAICAR synthetase CJF59_RS07855 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CJF59_RS07870 PF02769 AIR synthase related protein, C-terminal domain CJF59_RS07870 PF00586 AIR synthase related protein, N-terminal domain CJF59_RS07870 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CJF59_RS07875 PF01722 BolA-like protein CJF59_RS07880 PF00462 Glutaredoxin CJF59_RS07890 PF02021 Uncharacterised protein family UPF0102 CJF59_RS07895 PF13091 PLD-like domain CJF59_RS07895 PF13396 Phospholipase_D-nuclease N-terminal CJF59_RS07910 PF00581 Rhodanese-like domain CJF59_RS07915 PF01053 Cys/Met metabolism PLP-dependent enzyme CJF59_RS07920 PF13335 Magnesium chelatase, subunit ChlI C-terminal CJF59_RS07920 PF01078 Magnesium chelatase, subunit ChlI CJF59_RS07925 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJF59_RS07925 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJF59_RS07930 PF00459 Inositol monophosphatase family CJF59_RS07935 PF00034 Cytochrome c CJF59_RS07940 PF02348 Cytidylyltransferase CJF59_RS07945 PF01842 ACT domain CJF59_RS07945 PF00800 Prephenate dehydratase CJF59_RS07945 PF01817 Chorismate mutase type II CJF59_RS07950 PF00701 Dihydrodipicolinate synthetase family CJF59_RS07955 PF01668 SmpB protein CJF59_RS07960 PF00313 'Cold-shock' DNA-binding domain CJF59_RS07990 PF00698 Acyl transferase domain CJF59_RS08000 PF00550 Phosphopantetheine attachment site CJF59_RS08005 PF00109 Beta-ketoacyl synthase, N-terminal domain CJF59_RS08005 PF02801 Beta-ketoacyl synthase, C-terminal domain CJF59_RS08010 PF02618 YceG-like family CJF59_RS08020 PF00459 Inositol monophosphatase family CJF59_RS08030 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CJF59_RS08035 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CJF59_RS08045 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CJF59_RS08045 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CJF59_RS08055 PF00009 Elongation factor Tu GTP binding domain CJF59_RS08060 PF01507 Phosphoadenosine phosphosulfate reductase family CJF59_RS08065 PF01507 Phosphoadenosine phosphosulfate reductase family CJF59_RS08075 PF04055 Radical SAM superfamily CJF59_RS08075 PF06968 Biotin and Thiamin Synthesis associated domain CJF59_RS08085 PF06508 Queuosine biosynthesis protein QueC CJF59_RS08095 PF06039 Malate:quinone oxidoreductase (Mqo) CJF59_RS08100 PF02566 OsmC-like protein CJF59_RS08105 PF01264 Chorismate synthase CJF59_RS08115 PF01243 Pyridoxamine 5'-phosphate oxidase CJF59_RS08115 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CJF59_RS08130 PF01026 TatD related DNase CJF59_RS08135 PF09334 tRNA synthetases class I (M) CJF59_RS08135 PF08264 Anticodon-binding domain of tRNA CJF59_RS08145 PF02223 Thymidylate kinase CJF59_RS08150 PF07943 Penicillin-binding protein 5, C-terminal domain CJF59_RS08150 PF00768 D-alanyl-D-alanine carboxypeptidase CJF59_RS08155 PF05036 Sporulation related domain CJF59_RS08155 PF03330 Lytic transglycolase CJF59_RS08160 PF13406 Transglycosylase SLT domain CJF59_RS08175 PF13520 Amino acid permease CJF59_RS08180 PF02673 Bacitracin resistance protein BacA CJF59_RS08205 PF13847 Methyltransferase domain CJF59_RS08205 PF17827 PrmC N-terminal domain CJF59_RS08215 PF00472 RF-1 domain CJF59_RS08215 PF03462 PCRF domain CJF59_RS08220 PF13393 Histidyl-tRNA synthetase CJF59_RS08220 PF03129 Anticodon binding domain CJF59_RS08225 PF04551 GcpE protein CJF59_RS08235 PF03060 Nitronate monooxygenase CJF59_RS08240 PF00696 Amino acid kinase family CJF59_RS08240 PF13840 ACT domain CJF59_RS08240 PF01842 ACT domain CJF59_RS08250 PF10282 Lactonase, 7-bladed beta-propeller CJF59_RS08265 PF00462 Glutaredoxin CJF59_RS08275 PF08241 Methyltransferase domain CJF59_RS08280 PF06463 Molybdenum Cofactor Synthesis C CJF59_RS08280 PF04055 Radical SAM superfamily CJF59_RS08285 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CJF59_RS08285 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CJF59_RS08285 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CJF59_RS08285 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CJF59_RS08290 PF00483 Nucleotidyl transferase CJF59_RS08300 PF03099 Biotin/lipoate A/B protein ligase family CJF59_RS08310 PF01722 BolA-like protein CJF59_RS08315 PF00684 DnaJ central domain CJF59_RS08315 PF00226 DnaJ domain CJF59_RS08315 PF01556 DnaJ C terminal domain CJF59_RS08320 PF08406 CbbQ/NirQ/NorQ C-terminal CJF59_RS08320 PF12556 Cobaltochelatase CobS subunit N terminal CJF59_RS08320 PF07728 AAA domain (dynein-related subfamily) CJF59_RS08325 PF06213 Cobalamin biosynthesis protein CobT CJF59_RS08325 PF11775 Cobalamin biosynthesis protein CobT VWA domain CJF59_RS08330 PF00282 Pyridoxal-dependent decarboxylase conserved domain CJF59_RS08335 PF13593 SBF-like CPA transporter family (DUF4137) CJF59_RS08345 PF17757 UvrB interaction domain CJF59_RS08345 PF00270 DEAD/DEAH box helicase CJF59_RS08345 PF03461 TRCF domain CJF59_RS08345 PF00271 Helicase conserved C-terminal domain CJF59_RS08345 PF02559 CarD-like/TRCF domain CJF59_RS08350 PF03937 Flavinator of succinate dehydrogenase CJF59_RS08355 PF17191 RecG wedge domain CJF59_RS08355 PF00270 DEAD/DEAH box helicase CJF59_RS08355 PF00271 Helicase conserved C-terminal domain CJF59_RS08360 PF02581 Thiamine monophosphate synthase CJF59_RS08365 PF05690 Thiazole biosynthesis protein ThiG CJF59_RS08375 PF01266 FAD dependent oxidoreductase CJF59_RS08385 PF03952 Enolase, N-terminal domain CJF59_RS08385 PF00113 Enolase, C-terminal TIM barrel domain CJF59_RS08395 PF00471 Ribosomal protein L33 CJF59_RS08400 PF03453 MoeA N-terminal region (domain I and II) CJF59_RS08400 PF03454 MoeA C-terminal region (domain IV) CJF59_RS08400 PF00994 Probable molybdopterin binding domain CJF59_RS08405 PF00717 Peptidase S24-like CJF59_RS08405 PF01726 LexA DNA binding domain CJF59_RS08410 PF13649 Methyltransferase domain CJF59_RS08420 PF00155 Aminotransferase class I and II CJF59_RS08425 PF00202 Aminotransferase class-III CJF59_RS08430 PF02391 MoaE protein CJF59_RS08435 PF02597 ThiS family CJF59_RS08445 PF01066 CDP-alcohol phosphatidyltransferase CJF59_RS08450 PF08459 UvrC Helix-hairpin-helix N-terminal CJF59_RS08450 PF02151 UvrB/uvrC motif CJF59_RS08450 PF12826 Helix-hairpin-helix motif CJF59_RS08450 PF01541 GIY-YIG catalytic domain CJF59_RS08455 PF01244 Membrane dipeptidase (Peptidase family M19) CJF59_RS08470 PF17243 POTRA domain TamA domain 1 CJF59_RS08470 PF07244 Surface antigen variable number repeat CJF59_RS08470 PF01103 Surface antigen CJF59_RS08480 PF01938 TRAM domain CJF59_RS08480 PF04055 Radical SAM superfamily CJF59_RS08480 PF00919 Uncharacterized protein family UPF0004 CJF59_RS08485 PF02562 PhoH-like protein CJF59_RS08490 PF02130 Uncharacterized protein family UPF0054 CJF59_RS08495 PF00571 CBS domain CJF59_RS08495 PF03471 Transporter associated domain CJF59_RS08500 PF13462 Thioredoxin CJF59_RS08505 PF02463 RecF/RecN/SMC N terminal domain CJF59_RS08515 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CJF59_RS08515 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CJF59_RS08530 PF01817 Chorismate mutase type II CJF59_RS08530 PF02153 Prephenate dehydrogenase CJF59_RS08540 PF00285 Citrate synthase, C-terminal domain CJF59_RS08550 PF00156 Phosphoribosyl transferase domain CJF59_RS08555 PF01177 Asp/Glu/Hydantoin racemase CJF59_RS08560 PF00348 Polyprenyl synthetase CJF59_RS08570 PF00268 Ribonucleotide reductase, small chain CJF59_RS08575 PF02867 Ribonucleotide reductase, barrel domain CJF59_RS08575 PF00317 Ribonucleotide reductase, all-alpha domain CJF59_RS08575 PF03477 ATP cone domain CJF59_RS08580 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CJF59_RS08580 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CJF59_RS08585 PF02355 Protein export membrane protein CJF59_RS08585 PF07549 SecD/SecF GG Motif CJF59_RS08590 PF07549 SecD/SecF GG Motif CJF59_RS08590 PF02355 Protein export membrane protein CJF59_RS08600 PF01741 Large-conductance mechanosensitive channel, MscL CJF59_RS08605 PF01197 Ribosomal protein L31 CJF59_RS08610 PF00011 Hsp20/alpha crystallin family CJF59_RS08630 PF00731 AIR carboxylase CJF59_RS08635 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CJF59_RS08635 PF02222 ATP-grasp domain CJF59_RS08640 PF04002 RadC-like JAB domain CJF59_RS08645 PF04002 RadC-like JAB domain CJF59_RS08650 PF00580 UvrD/REP helicase N-terminal domain CJF59_RS08650 PF13361 UvrD-like helicase C-terminal domain CJF59_RS08660 PF00557 Metallopeptidase family M24 CJF59_RS08660 PF01321 Creatinase/Prolidase N-terminal domain CJF59_RS08665 PF00180 Isocitrate/isopropylmalate dehydrogenase CJF59_RS08665 PF18324 Hypothetical protein TT1725 CJF59_RS08675 PF00009 Elongation factor Tu GTP binding domain CJF59_RS08675 PF03144 Elongation factor Tu domain 2 CJF59_RS08675 PF16658 Class II release factor RF3, C-terminal domain CJF59_RS08680 PF00163 Ribosomal protein S4/S9 N-terminal domain CJF59_RS08680 PF01479 S4 domain CJF59_RS08690 PF00999 Sodium/hydrogen exchanger family CJF59_RS08705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJF59_RS08710 PF12849 PBP superfamily domain CJF59_RS08715 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CJF59_RS08715 PF03483 B3/4 domain CJF59_RS08715 PF03484 tRNA synthetase B5 domain CJF59_RS08715 PF03147 Ferredoxin-fold anticodon binding domain CJF59_RS08715 PF01588 Putative tRNA binding domain CJF59_RS08720 PF01409 tRNA synthetases class II core domain (F) CJF59_RS08720 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CJF59_RS08725 PF00453 Ribosomal protein L20 CJF59_RS08730 PF01632 Ribosomal protein L35 CJF59_RS08735 PF01232 Mannitol dehydrogenase Rossmann domain CJF59_RS08735 PF08125 Mannitol dehydrogenase C-terminal domain CJF59_RS08740 PF00034 Cytochrome c CJF59_RS08740 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CJF59_RS08740 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CJF59_RS08745 PF01799 [2Fe-2S] binding domain CJF59_RS08745 PF00111 2Fe-2S iron-sulfur cluster binding domain CJF59_RS08750 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CJF59_RS08755 PF02657 Fe-S metabolism associated domain CJF59_RS08760 PF10431 C-terminal, D2-small domain, of ClpB protein CJF59_RS08760 PF07724 AAA domain (Cdc48 subfamily) CJF59_RS08760 PF00004 ATPase family associated with various cellular activities (AAA) CJF59_RS08765 PF00227 Proteasome subunit CJF59_RS08770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJF59_RS08770 PF00512 His Kinase A (phospho-acceptor) domain CJF59_RS08770 PF08448 PAS fold CJF59_RS08770 PF00072 Response regulator receiver domain CJF59_RS08770 PF13188 PAS domain CJF59_RS08775 PF00072 Response regulator receiver domain CJF59_RS08775 PF00512 His Kinase A (phospho-acceptor) domain CJF59_RS08775 PF13188 PAS domain CJF59_RS08775 PF08448 PAS fold CJF59_RS08775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJF59_RS08790 PF00005 ABC transporter CJF59_RS08805 PF00756 Putative esterase CJF59_RS08810 PF01062 Bestrophin, RFP-TM, chloride channel CJF59_RS08815 PF02559 CarD-like/TRCF domain CJF59_RS08830 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJF59_RS08840 PF00043 Glutathione S-transferase, C-terminal domain CJF59_RS08840 PF13417 Glutathione S-transferase, N-terminal domain CJF59_RS08845 PF05209 Septum formation inhibitor MinC, N-terminal domain CJF59_RS08845 PF03775 Septum formation inhibitor MinC, C-terminal domain CJF59_RS08850 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CJF59_RS08855 PF03776 Septum formation topological specificity factor MinE CJF59_RS08860 PF00392 Bacterial regulatory proteins, gntR family CJF59_RS08860 PF07729 FCD domain CJF59_RS08865 PF00664 ABC transporter transmembrane region CJF59_RS08865 PF00005 ABC transporter CJF59_RS08885 PF04453 LPS transport system D CJF59_RS08890 PF09312 SurA N-terminal domain CJF59_RS08890 PF00639 PPIC-type PPIASE domain CJF59_RS08895 PF00398 Ribosomal RNA adenine dimethylase CJF59_RS08905 PF01281 Ribosomal protein L9, N-terminal domain CJF59_RS08905 PF03948 Ribosomal protein L9, C-terminal domain CJF59_RS08910 PF01084 Ribosomal protein S18 CJF59_RS08915 PF01250 Ribosomal protein S6 CJF59_RS08925 PF00140 Sigma-70 factor, region 1.2 CJF59_RS08925 PF04545 Sigma-70, region 4 CJF59_RS08925 PF04539 Sigma-70 region 3 CJF59_RS08925 PF04542 Sigma-70 region 2 CJF59_RS08925 PF03979 Sigma-70 factor, region 1.1 CJF59_RS08925 PF04546 Sigma-70, non-essential region CJF59_RS08930 PF01807 CHC2 zinc finger CJF59_RS08930 PF08275 DNA primase catalytic core, N-terminal domain CJF59_RS08930 PF13662 Toprim domain CJF59_RS08930 PF08278 DNA primase DnaG DnaB-binding CJF59_RS08930 PF10410 DnaB-helicase binding domain of primase CJF59_RS08940 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CJF59_RS08940 PF00117 Glutamine amidotransferase class-I CJF59_RS08945 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CJF59_RS08945 PF02142 MGS-like domain CJF59_RS08945 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CJF59_RS08950 PF01272 Transcription elongation factor, GreA/GreB, C-term CJF59_RS08950 PF03449 Transcription elongation factor, N-terminal CJF59_RS08955 PF00291 Pyridoxal-phosphate dependent enzyme CJF59_RS08955 PF13291 ACT domain CJF59_RS08960 PF01676 Metalloenzyme superfamily CJF59_RS08960 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CJF59_RS08975 PF03572 Peptidase family S41 CJF59_RS08975 PF13180 PDZ domain CJF59_RS08985 PF00293 NUDIX domain CJF59_RS08990 PF07690 Major Facilitator Superfamily CJF59_RS08995 PF13533 Biotin-lipoyl like CJF59_RS09000 PF00664 ABC transporter transmembrane region CJF59_RS09000 PF00005 ABC transporter CJF59_RS09005 PF01743 Poly A polymerase head domain CJF59_RS09005 PF12627 Probable RNA and SrmB- binding site of polymerase A CJF59_RS09005 PF13735 tRNA nucleotidyltransferase domain 2 putative CJF59_RS09015 PF07726 ATPase family associated with various cellular activities (AAA) CJF59_RS09015 PF17863 AAA lid domain CJF59_RS09040 PF18755 Restriction Enzyme Adenine Methylase Associated CJF59_RS09040 PF01555 DNA methylase CJF59_RS09045 PF01351 Ribonuclease HII CJF59_RS09050 PF05532 CsbD-like CJF59_RS09055 PF07690 Major Facilitator Superfamily CJF59_RS09060 PF13533 Biotin-lipoyl like CJF59_RS09065 PF00873 AcrB/AcrD/AcrF family CJF59_RS09070 PF00873 AcrB/AcrD/AcrF family CJF59_RS09075 PF02321 Outer membrane efflux protein CJF59_RS09080 PF07043 Protein of unknown function (DUF1328) CJF59_RS09090 PF00005 ABC transporter CJF59_RS09095 PF00528 Binding-protein-dependent transport system inner membrane component CJF59_RS09105 PF01196 Ribosomal protein L17 CJF59_RS09110 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CJF59_RS09110 PF01000 RNA polymerase Rpb3/RpoA insert domain CJF59_RS09110 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CJF59_RS09115 PF00411 Ribosomal protein S11 CJF59_RS09120 PF00416 Ribosomal protein S13/S18 CJF59_RS09125 PF05191 Adenylate kinase, active site lid CJF59_RS09130 PF00344 SecY translocase CJF59_RS09135 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CJF59_RS09140 PF00327 Ribosomal protein L30p/L7e CJF59_RS09145 PF00333 Ribosomal protein S5, N-terminal domain CJF59_RS09145 PF03719 Ribosomal protein S5, C-terminal domain CJF59_RS09150 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CJF59_RS09155 PF00347 Ribosomal protein L6 CJF59_RS09160 PF00410 Ribosomal protein S8 CJF59_RS09165 PF00253 Ribosomal protein S14p/S29e CJF59_RS09170 PF00281 Ribosomal protein L5 CJF59_RS09170 PF00673 ribosomal L5P family C-terminus CJF59_RS09175 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CJF59_RS09180 PF00238 Ribosomal protein L14p/L23e CJF59_RS09185 PF00366 Ribosomal protein S17 CJF59_RS09190 PF00831 Ribosomal L29 protein CJF59_RS09195 PF00252 Ribosomal protein L16p/L10e CJF59_RS09200 PF00189 Ribosomal protein S3, C-terminal domain CJF59_RS09200 PF07650 KH domain CJF59_RS09205 PF00237 Ribosomal protein L22p/L17e CJF59_RS09210 PF00203 Ribosomal protein S19 CJF59_RS09215 PF03947 Ribosomal Proteins L2, C-terminal domain CJF59_RS09215 PF00181 Ribosomal Proteins L2, RNA binding domain CJF59_RS09220 PF00276 Ribosomal protein L23 CJF59_RS09225 PF00573 Ribosomal protein L4/L1 family CJF59_RS09230 PF00297 Ribosomal protein L3 CJF59_RS09235 PF00338 Ribosomal protein S10p/S20e CJF59_RS09240 PF03143 Elongation factor Tu C-terminal domain CJF59_RS09240 PF03144 Elongation factor Tu domain 2 CJF59_RS09240 PF00009 Elongation factor Tu GTP binding domain CJF59_RS09245 PF00177 Ribosomal protein S7p/S5e CJF59_RS09250 PF00164 Ribosomal protein S12/S23 CJF59_RS09255 PF04983 RNA polymerase Rpb1, domain 3 CJF59_RS09255 PF00623 RNA polymerase Rpb1, domain 2 CJF59_RS09255 PF04997 RNA polymerase Rpb1, domain 1 CJF59_RS09255 PF05000 RNA polymerase Rpb1, domain 4 CJF59_RS09255 PF04998 RNA polymerase Rpb1, domain 5 CJF59_RS09260 PF04563 RNA polymerase beta subunit CJF59_RS09260 PF04565 RNA polymerase Rpb2, domain 3 CJF59_RS09260 PF00562 RNA polymerase Rpb2, domain 6 CJF59_RS09260 PF04561 RNA polymerase Rpb2, domain 2 CJF59_RS09260 PF04560 RNA polymerase Rpb2, domain 7 CJF59_RS09260 PF10385 RNA polymerase beta subunit external 1 domain CJF59_RS09270 PF16320 Ribosomal protein L7/L12 dimerisation domain CJF59_RS09270 PF00542 Ribosomal protein L7/L12 C-terminal domain CJF59_RS09275 PF00466 Ribosomal protein L10 CJF59_RS09280 PF00687 Ribosomal protein L1p/L10e family CJF59_RS09285 PF03946 Ribosomal protein L11, N-terminal domain CJF59_RS09285 PF00298 Ribosomal protein L11, RNA binding domain CJF59_RS09290 PF02321 Outer membrane efflux protein CJF59_RS09295 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJF59_RS09300 PF00873 AcrB/AcrD/AcrF family CJF59_RS09305 PF00512 His Kinase A (phospho-acceptor) domain CJF59_RS09305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJF59_RS09310 PF00486 Transcriptional regulatory protein, C terminal CJF59_RS09310 PF00072 Response regulator receiver domain CJF59_RS09315 PF02646 RmuC family CJF59_RS09320 PF00083 Sugar (and other) transporter CJF59_RS09330 PF00578 AhpC/TSA family CJF59_RS09335 PF08335 GlnD PII-uridylyltransferase CJF59_RS09335 PF03710 Glutamate-ammonia ligase adenylyltransferase CJF59_RS09360 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CJF59_RS09365 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJF59_RS09365 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJF59_RS09395 PF01578 Cytochrome C assembly protein CJF59_RS09400 PF03100 CcmE CJF59_RS09405 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CJF59_RS09405 PF01578 Cytochrome C assembly protein CJF59_RS09410 PF08534 Redoxin CJF59_RS09415 PF03918 Cytochrome C biogenesis protein CJF59_RS09435 PF04632 Fusaric acid resistance protein family CJF59_RS09440 PF04632 Fusaric acid resistance protein family CJF59_RS09445 PF07885 Ion channel CJF59_RS09445 PF17655 Inward rectifier potassium channel C-terminal domain CJF59_RS09465 PF00005 ABC transporter CJF59_RS09475 PF00672 HAMP domain CJF59_RS09475 PF02743 Cache domain CJF59_RS09475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJF59_RS09480 PF02541 Ppx/GppA phosphatase family CJF59_RS09485 PF13089 Polyphosphate kinase N-terminal domain CJF59_RS09485 PF02503 Polyphosphate kinase middle domain CJF59_RS09485 PF13090 Polyphosphate kinase C-terminal domain 2 CJF59_RS09485 PF17941 Polyphosphate kinase C-terminal domain 1 CJF59_RS09495 PF00586 AIR synthase related protein, N-terminal domain CJF59_RS09495 PF02769 AIR synthase related protein, C-terminal domain CJF59_RS09500 PF00551 Formyl transferase CJF59_RS09505 PF01189 16S rRNA methyltransferase RsmB/F CJF59_RS09505 PF01029 NusB family CJF59_RS09510 PF00834 Ribulose-phosphate 3 epimerase family CJF59_RS09520 PF00534 Glycosyl transferases group 1 CJF59_RS09520 PF13579 Glycosyl transferase 4-like domain CJF59_RS09530 PF00929 Exonuclease CJF59_RS09535 PF01121 Dephospho-CoA kinase CJF59_RS09540 PF01488 Shikimate / quinate 5-dehydrogenase CJF59_RS09540 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CJF59_RS09540 PF08501 Shikimate dehydrogenase substrate binding domain CJF59_RS09560 PF14698 Argininosuccinate lyase C-terminal CJF59_RS09560 PF00206 Lyase CJF59_RS09565 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CJF59_RS09565 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CJF59_RS09575 PF16363 GDP-mannose 4,6 dehydratase CJF59_RS09580 PF00089 Trypsin CJF59_RS09585 PF08240 Alcohol dehydrogenase GroES-like domain CJF59_RS09590 PF01022 Bacterial regulatory protein, arsR family CJF59_RS09595 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CJF59_RS09600 PF02548 Ketopantoate hydroxymethyltransferase CJF59_RS09715 PF00271 Helicase conserved C-terminal domain CJF59_RS09715 PF08494 DEAD/H associated CJF59_RS09715 PF00270 DEAD/DEAH box helicase CJF59_RS09790 PF12833 Helix-turn-helix domain CJF59_RS09790 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CJF59_RS09820 PF02423 Ornithine cyclodeaminase/mu-crystallin family CJF59_RS09825 PF00881 Nitroreductase family CJF59_RS09845 PF01048 Phosphorylase superfamily CJF59_RS09850 PF02167 Cytochrome C1 family CJF59_RS09850 PF00033 Cytochrome b/b6/petB CJF59_RS09850 PF00032 Cytochrome b(C-terminal)/b6/petD CJF59_RS09855 PF00033 Cytochrome b/b6/petB CJF59_RS09855 PF02167 Cytochrome C1 family CJF59_RS09855 PF00032 Cytochrome b(C-terminal)/b6/petD CJF59_RS09860 PF01218 Coproporphyrinogen III oxidase CJF59_RS09870 PF00488 MutS domain V CJF59_RS09870 PF01713 Smr domain CJF59_RS09875 PF00034 Cytochrome c CJF59_RS09875 PF03150 Di-haem cytochrome c peroxidase CJF59_RS09880 PF01555 DNA methylase CJF59_RS09890 PF00934 PE family CJF59_RS09890 PF00300 Histidine phosphatase superfamily (branch 1) CJF59_RS09895 PF02556 Preprotein translocase subunit SecB CJF59_RS09905 PF03900 Porphobilinogen deaminase, C-terminal domain CJF59_RS09905 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CJF59_RS09910 PF00814 Glycoprotease family CJF59_RS09915 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CJF59_RS09930 PF01921 tRNA synthetases class I (K) CJF59_RS09935 PF18146 Damage-inducible protein CinA KH domain CJF59_RS09935 PF00994 Probable molybdopterin binding domain CJF59_RS09935 PF02464 Competence-damaged protein CJF59_RS09940 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CJF59_RS09945 PF00589 Phage integrase family CJF59_RS09945 PF02899 Phage integrase, N-terminal SAM-like domain CJF59_RS09955 PF01761 3-dehydroquinate synthase CJF59_RS09960 PF00691 OmpA family CJF59_RS09970 PF02272 DHHA1 domain CJF59_RS09970 PF01411 tRNA synthetases class II (A) CJF59_RS09970 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CJF59_RS09975 PF02666 Phosphatidylserine decarboxylase CJF59_RS09980 PF01066 CDP-alcohol phosphatidyltransferase CJF59_RS09985 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CJF59_RS09990 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CJF59_RS10020 PF16123 Hydroxyacylglutathione hydrolase C-terminus CJF59_RS10020 PF00753 Metallo-beta-lactamase superfamily CJF59_RS10035 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CJF59_RS10035 PF05221 S-adenosyl-L-homocysteine hydrolase CJF59_RS10050 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJF59_RS10050 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CJF59_RS10055 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CJF59_RS10055 PF02817 e3 binding domain CJF59_RS10055 PF00364 Biotin-requiring enzyme CJF59_RS10060 PF00676 Dehydrogenase E1 component CJF59_RS10060 PF16078 2-oxoglutarate dehydrogenase N-terminus CJF59_RS10060 PF02779 Transketolase, pyrimidine binding domain CJF59_RS10060 PF16870 2-oxoglutarate dehydrogenase C-terminal CJF59_RS10065 PF03969 AFG1-like ATPase CJF59_RS10070 PF02627 Carboxymuconolactone decarboxylase family CJF59_RS10075 PF13567 Domain of unknown function (DUF4131) CJF59_RS10075 PF03772 Competence protein CJF59_RS10075 PF00753 Metallo-beta-lactamase superfamily CJF59_RS10080 PF00749 tRNA synthetases class I (E and Q), catalytic domain CJF59_RS10085 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CJF59_RS10085 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CJF59_RS10090 PF01979 Amidohydrolase family CJF59_RS10095 PF02660 Glycerol-3-phosphate acyltransferase CJF59_RS10100 PF02481 DNA recombination-mediator protein A CJF59_RS10100 PF17782 DprA winged helix domain CJF59_RS10105 PF01751 Toprim domain CJF59_RS10105 PF13368 Topoisomerase C-terminal repeat CJF59_RS10105 PF01396 Topoisomerase DNA binding C4 zinc finger CJF59_RS10105 PF01131 DNA topoisomerase CJF59_RS10110 PF00575 S1 RNA binding domain CJF59_RS10110 PF00773 RNB domain CJF59_RS10110 PF08461 Ribonuclease R winged-helix domain CJF59_RS10110 PF17876 Cold shock domain CJF59_RS10110 PF08206 Ribonuclease B OB domain CJF59_RS10115 PF03572 Peptidase family S41 CJF59_RS10115 PF13180 PDZ domain CJF59_RS10125 PF00691 OmpA family CJF59_RS10130 PF00291 Pyridoxal-phosphate dependent enzyme CJF59_RS10135 PF02082 Transcriptional regulator CJF59_RS10150 PF00204 DNA gyrase B CJF59_RS10150 PF01751 Toprim domain CJF59_RS10150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJF59_RS10150 PF00986 DNA gyrase B subunit, carboxyl terminus CJF59_RS10155 PF00892 EamA-like transporter family CJF59_RS10160 PF00361 Proton-conducting membrane transporter CJF59_RS10160 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus CJF59_RS10165 PF01119 DNA mismatch repair protein, C-terminal domain CJF59_RS10165 PF08676 MutL C terminal dimerisation domain CJF59_RS10175 PF01252 Signal peptidase (SPase) II CJF59_RS10180 PF06827 Zinc finger found in FPG and IleRS CJF59_RS10180 PF00133 tRNA synthetases class I (I, L, M and V) CJF59_RS10180 PF08264 Anticodon-binding domain of tRNA CJF59_RS10185 PF01687 Riboflavin kinase CJF59_RS10185 PF06574 FAD synthetase CJF59_RS10195 PF03079 ARD/ARD' family CJF59_RS10200 PF00596 Class II Aldolase and Adducin N-terminal domain CJF59_RS10205 PF02416 mttA/Hcf106 family CJF59_RS10220 PF00202 Aminotransferase class-III CJF59_RS10225 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CJF59_RS10225 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CJF59_RS10235 PF01430 Hsp33 protein CJF59_RS10245 PF00270 DEAD/DEAH box helicase CJF59_RS10245 PF04408 Helicase associated domain (HA2) CJF59_RS10245 PF00271 Helicase conserved C-terminal domain CJF59_RS10245 PF08482 ATP-dependent helicase C-terminal CJF59_RS10250 PF13180 PDZ domain CJF59_RS10255 PF00248 Aldo/keto reductase family CJF59_RS10265 PF00883 Cytosol aminopeptidase family, catalytic domain CJF59_RS10265 PF02789 Cytosol aminopeptidase family, N-terminal domain CJF59_RS10270 PF00459 Inositol monophosphatase family CJF59_RS10275 PF01300 Telomere recombination CJF59_RS10275 PF03481 Putative GTP-binding controlling metal-binding CJF59_RS10285 PF02913 FAD linked oxidases, C-terminal domain CJF59_RS10285 PF01565 FAD binding domain CJF59_RS10300 PF01923 Cobalamin adenosyltransferase CJF59_RS10330 PF13193 AMP-binding enzyme C-terminal domain CJF59_RS10330 PF00501 AMP-binding enzyme CJF59_RS10330 PF16177 Acetyl-coenzyme A synthetase N-terminus CJF59_RS10345 PF01619 Proline dehydrogenase CJF59_RS10345 PF00171 Aldehyde dehydrogenase family CJF59_RS10345 PF14850 DNA-binding domain of Proline dehydrogenase CJF59_RS10345 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CJF59_RS10355 PF00324 Amino acid permease CJF59_RS10375 PF18073 Rubredoxin metal binding domain CJF59_RS10375 PF06745 KaiC CJF59_RS10385 PF02405 Permease MlaE CJF59_RS10390 PF00005 ABC transporter CJF59_RS10395 PF12795 Mechanosensitive ion channel porin domain CJF59_RS10395 PF00924 Mechanosensitive ion channel CJF59_RS10395 PF12794 Mechanosensitive ion channel inner membrane domain 1 CJF59_RS10400 PF03796 DnaB-like helicase C terminal domain CJF59_RS10400 PF00772 DnaB-like helicase N terminal domain CJF59_RS10410 PF00294 pfkB family carbohydrate kinase CJF59_RS10410 PF01467 Cytidylyltransferase-like CJF59_RS10415 PF00625 Guanylate kinase CJF59_RS10420 PF00561 alpha/beta hydrolase fold CJF59_RS10420 PF00106 short chain dehydrogenase CJF59_RS10430 PF00588 SpoU rRNA Methylase family CJF59_RS10430 PF08032 RNA 2'-O ribose methyltransferase substrate binding CJF59_RS10435 PF00570 HRDC domain CJF59_RS10435 PF01612 3'-5' exonuclease CJF59_RS10440 PF00571 CBS domain CJF59_RS10440 PF01380 SIS domain CJF59_RS10455 PF00005 ABC transporter CJF59_RS10460 PF03476 MOSC N-terminal beta barrel domain CJF59_RS10460 PF03473 MOSC domain CJF59_RS10460 PF00111 2Fe-2S iron-sulfur cluster binding domain CJF59_RS10470 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CJF59_RS10470 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CJF59_RS10480 PF00011 Hsp20/alpha crystallin family CJF59_RS10490 PF01327 Polypeptide deformylase CJF59_RS10495 PF00551 Formyl transferase CJF59_RS10495 PF02911 Formyl transferase, C-terminal domain CJF59_RS10500 PF01416 tRNA pseudouridine synthase CJF59_RS10510 PF07687 Peptidase dimerisation domain CJF59_RS10510 PF01546 Peptidase family M20/M25/M40 CJF59_RS10515 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CJF59_RS10515 PF14602 Hexapeptide repeat of succinyl-transferase CJF59_RS10515 PF00132 Bacterial transferase hexapeptide (six repeats) CJF59_RS10520 PF00696 Amino acid kinase family CJF59_RS10525 PF01926 50S ribosome-binding GTPase CJF59_RS10530 PF14849 YidC periplasmic domain CJF59_RS10530 PF02096 60Kd inner membrane protein CJF59_RS10535 PF00825 Ribonuclease P CJF59_RS10540 PF00468 Ribosomal protein L34 CJF59_RS10550 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJF59_RS10555 PF06230 LpxI C-terminal domain CJF59_RS10555 PF17930 LpxI N-terminal domain CJF59_RS10560 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CJF59_RS10560 PF00132 Bacterial transferase hexapeptide (six repeats) CJF59_RS10565 PF07977 FabA-like domain CJF59_RS10570 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CJF59_RS10570 PF00132 Bacterial transferase hexapeptide (six repeats) CJF59_RS10580 PF01103 Surface antigen CJF59_RS10580 PF07244 Surface antigen variable number repeat CJF59_RS10585 PF02163 Peptidase family M50 CJF59_RS10585 PF17820 PDZ domain CJF59_RS10590 PF13288 DXP reductoisomerase C-terminal domain CJF59_RS10590 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CJF59_RS10590 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CJF59_RS10600 PF01255 Putative undecaprenyl diphosphate synthase CJF59_RS10605 PF01765 Ribosome recycling factor CJF59_RS10610 PF00696 Amino acid kinase family CJF59_RS10615 PF01926 50S ribosome-binding GTPase CJF59_RS10615 PF07650 KH domain CJF59_RS10620 PF00035 Double-stranded RNA binding motif CJF59_RS10620 PF14622 Ribonuclease-III-like CJF59_RS10625 PF10502 Signal peptidase, peptidase S26 CJF59_RS10630 PF01648 4'-phosphopantetheinyl transferase superfamily CJF59_RS10635 PF02824 TGS domain CJF59_RS10635 PF04607 Region found in RelA / SpoT proteins CJF59_RS10635 PF13291 ACT domain CJF59_RS10640 PF01192 RNA polymerase Rpb6 CJF59_RS10645 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CJF59_RS10655 PF00484 Carbonic anhydrase CJF59_RS10665 PF00271 Helicase conserved C-terminal domain CJF59_RS10665 PF00270 DEAD/DEAH box helicase CJF59_RS10670 PF07021 Methionine biosynthesis protein MetW CJF59_RS10670 PF00561 alpha/beta hydrolase fold CJF59_RS10675 PF00561 alpha/beta hydrolase fold CJF59_RS10680 PF00679 Elongation factor G C-terminus CJF59_RS10680 PF00009 Elongation factor Tu GTP binding domain CJF59_RS10680 PF03144 Elongation factor Tu domain 2 CJF59_RS10680 PF06421 GTP-binding protein LepA C-terminus CJF59_RS10695 PF01011 PQQ enzyme repeat CJF59_RS10705 PF03951 Glutamine synthetase, beta-Grasp domain CJF59_RS10705 PF00120 Glutamine synthetase, catalytic domain CJF59_RS10710 PF00543 Nitrogen regulatory protein P-II CJF59_RS10715 PF00155 Aminotransferase class I and II CJF59_RS10735 PF00180 Isocitrate/isopropylmalate dehydrogenase CJF59_RS10740 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJF59_RS10745 PF01266 FAD dependent oxidoreductase CJF59_RS10755 PF00679 Elongation factor G C-terminus CJF59_RS10755 PF03144 Elongation factor Tu domain 2 CJF59_RS10755 PF00009 Elongation factor Tu GTP binding domain CJF59_RS10775 PF00224 Pyruvate kinase, barrel domain CJF59_RS10775 PF02887 Pyruvate kinase, alpha/beta domain CJF59_RS10785 PF00899 ThiF family CJF59_RS10820 PF03169 OPT oligopeptide transporter protein CJF59_RS10835 PF00561 alpha/beta hydrolase fold CJF59_RS10845 PF01545 Cation efflux family CJF59_RS10850 PF16916 Dimerisation domain of Zinc Transporter CJF59_RS10850 PF01545 Cation efflux family CJF59_RS10855 PF00654 Voltage gated chloride channel CJF59_RS10860 PF02492 CobW/HypB/UreG, nucleotide-binding domain CJF59_RS10860 PF07683 Cobalamin synthesis protein cobW C-terminal domain CJF59_RS10870 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJF59_RS10880 PF00011 Hsp20/alpha crystallin family CJF59_RS10885 PF00364 Biotin-requiring enzyme CJF59_RS10885 PF00561 alpha/beta hydrolase fold CJF59_RS10890 PF02779 Transketolase, pyrimidine binding domain CJF59_RS10890 PF02780 Transketolase, C-terminal domain CJF59_RS10895 PF00676 Dehydrogenase E1 component CJF59_RS10905 PF01384 Phosphate transporter family CJF59_RS10910 PF03976 Polyphosphate kinase 2 (PPK2) CJF59_RS10930 PF05649 Peptidase family M13 CJF59_RS10930 PF01431 Peptidase family M13 CJF59_RS10950 PF03061 Thioesterase superfamily CJF59_RS10970 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CJF59_RS10975 PF00106 short chain dehydrogenase CJF59_RS10980 PF02082 Transcriptional regulator CJF59_RS10985 PF04343 Protein of unknown function, DUF488 CJF59_RS10990 PF00551 Formyl transferase CJF59_RS11020 PF00999 Sodium/hydrogen exchanger family CJF59_RS11135 PF00581 Rhodanese-like domain CJF59_RS11135 PF17773 UPF0176 acylphosphatase like domain CJF59_RS11160 PF01757 Acyltransferase family CJF59_RS11250 PF00593 TonB dependent receptor CJF59_RS11250 PF07715 TonB-dependent Receptor Plug Domain CJF59_RS11320 PF02325 YGGT family CJF59_RS11465 PF03354 Phage Terminase CJF59_RS11580 PF03641 Possible lysine decarboxylase CJF59_RS11585 PF07690 Major Facilitator Superfamily CJF59_RS11595 PF03653 Uncharacterised protein family (UPF0093) CJF59_RS11600 PF13419 Haloacid dehalogenase-like hydrolase CJF59_RS11605 PF01208 Uroporphyrinogen decarboxylase (URO-D) CJF59_RS11610 PF02545 Maf-like protein CJF59_RS11620 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CJF59_RS11620 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CJF59_RS11620 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CJF59_RS11620 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CJF59_RS11625 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CJF59_RS11635 PF07690 Major Facilitator Superfamily CJF59_RS11645 PF03966 Trm112p-like protein CJF59_RS11650 PF05362 Lon protease (S16) C-terminal proteolytic domain CJF59_RS11650 PF02190 ATP-dependent protease La (LON) substrate-binding domain CJF59_RS11650 PF00004 ATPase family associated with various cellular activities (AAA) CJF59_RS11655 PF00085 Thioredoxin CJF59_RS11660 PF17755 UvrA DNA-binding domain CJF59_RS11660 PF17760 UvrA interaction domain CJF59_RS11660 PF00005 ABC transporter CJF59_RS11685 PF00881 Nitroreductase family CJF59_RS11695 PF00583 Acetyltransferase (GNAT) family CJF59_RS11700 PF02844 Phosphoribosylglycinamide synthetase, N domain CJF59_RS11700 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CJF59_RS11700 PF02843 Phosphoribosylglycinamide synthetase, C domain CJF59_RS11705 PF13742 OB-fold nucleic acid binding domain CJF59_RS11705 PF02601 Exonuclease VII, large subunit CJF59_RS11720 PF00266 Aminotransferase class-V CJF59_RS11725 PF00171 Aldehyde dehydrogenase family CJF59_RS11730 PF08240 Alcohol dehydrogenase GroES-like domain CJF59_RS11730 PF00107 Zinc-binding dehydrogenase CJF59_RS11735 PF02233 NAD(P) transhydrogenase beta subunit CJF59_RS11740 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CJF59_RS11745 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CJF59_RS11745 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CJF59_RS11750 PF02774 Semialdehyde dehydrogenase, dimerisation domain CJF59_RS11750 PF01118 Semialdehyde dehydrogenase, NAD binding domain CJF59_RS11755 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CJF59_RS11760 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CJF59_RS11765 PF00890 FAD binding domain CJF59_RS11765 PF02910 Fumarate reductase flavoprotein C-term CJF59_RS11770 PF13085 2Fe-2S iron-sulfur cluster binding domain CJF59_RS11780 PF00892 EamA-like transporter family CJF59_RS11785 PF00162 Phosphoglycerate kinase CJF59_RS11790 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CJF59_RS11790 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CJF59_RS11795 PF00456 Transketolase, thiamine diphosphate binding domain CJF59_RS11795 PF02779 Transketolase, pyrimidine binding domain CJF59_RS11795 PF02780 Transketolase, C-terminal domain CJF59_RS11805 PF00155 Aminotransferase class I and II CJF59_RS11820 PF00154 recA bacterial DNA recombination protein CJF59_RS11830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_RS11830 PF03459 TOBE domain CJF59_RS11835 PF04349 Periplasmic glucan biosynthesis protein, MdoG CJF59_RS11840 PF13632 Glycosyl transferase family group 2 CJF59_RS11845 PF01979 Amidohydrolase family CJF59_RS11850 PF07690 Major Facilitator Superfamily CJF59_RS11865 PF12170 DNA polymerase III tau subunit V interacting with alpha CJF59_RS11865 PF12169 DNA polymerase III subunits gamma and tau domain III CJF59_RS11865 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CJF59_RS11870 PF02575 YbaB/EbfC DNA-binding family CJF59_RS11875 PF13662 Toprim domain CJF59_RS11875 PF02132 RecR protein CJF59_RS11885 PF02152 Dihydroneopterin aldolase CJF59_RS11895 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CJF59_RS11900 PF02224 Cytidylate kinase CJF59_RS11905 PF00575 S1 RNA binding domain CJF59_RS11920 PF01725 Ham1 family CJF59_RS11925 PF03725 3' exoribonuclease family, domain 2 CJF59_RS11925 PF01138 3' exoribonuclease family, domain 1 CJF59_RS11930 PF01628 HrcA protein C terminal domain CJF59_RS11935 PF17092 Penicillin-binding protein OB-like domain CJF59_RS11935 PF00905 Penicillin binding protein transpeptidase domain CJF59_RS11935 PF00912 Transglycosylase CJF59_RS11950 PF01618 MotA/TolQ/ExbB proton channel family CJF59_RS11955 PF02472 Biopolymer transport protein ExbD/TolR CJF59_RS11960 PF02472 Biopolymer transport protein ExbD/TolR CJF59_RS11970 PF01098 Cell cycle protein CJF59_RS11975 PF00905 Penicillin binding protein transpeptidase domain CJF59_RS11975 PF03717 Penicillin-binding Protein dimerisation domain CJF59_RS11995 PF08502 LeuA allosteric (dimerisation) domain CJF59_RS11995 PF00682 HMGL-like CJF59_RS12000 PF02628 Cytochrome oxidase assembly protein CJF59_RS12010 PF07690 Major Facilitator Superfamily CJF59_RS12015 PF00512 His Kinase A (phospho-acceptor) domain CJF59_RS12015 PF13188 PAS domain CJF59_RS12015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJF59_RS12015 PF08448 PAS fold CJF59_RS12015 PF00072 Response regulator receiver domain CJF59_RS12020 PF00156 Phosphoribosyl transferase domain CJF59_RS12025 PF04632 Fusaric acid resistance protein family CJF59_RS12030 PF13660 Domain of unknown function (DUF4147) CJF59_RS12030 PF05161 MOFRL family CJF59_RS12035 PF03167 Uracil DNA glycosylase superfamily CJF59_RS12040 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CJF59_RS12040 PF00034 Cytochrome c CJF59_RS12045 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CJF59_RS12045 PF13360 PQQ-like domain CJF59_RS12055 PF01027 Inhibitor of apoptosis-promoting Bax1 CJF59_RS12065 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CJF59_RS12065 PF06481 COX Aromatic Rich Motif CJF59_RS12070 PF00115 Cytochrome C and Quinol oxidase polypeptide I CJF59_RS12075 PF00510 Cytochrome c oxidase subunit III CJF59_RS12080 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CJF59_RS12085 PF11953 Domain of unknown function (DUF3470) CJF59_RS12085 PF00037 4Fe-4S binding domain CJF59_RS12095 PF02789 Cytosol aminopeptidase family, N-terminal domain CJF59_RS12095 PF00883 Cytosol aminopeptidase family, catalytic domain CJF59_RS12110 PF00953 Glycosyl transferase family 4 CJF59_RS12115 PF02719 Polysaccharide biosynthesis protein CJF59_RS12120 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CJF59_RS12130 PF01979 Amidohydrolase family CJF59_RS12135 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CJF59_RS12135 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJF59_RS12140 PF00175 Oxidoreductase NAD-binding domain CJF59_RS12140 PF00970 Oxidoreductase FAD-binding domain CJF59_RS12160 PF09335 SNARE associated Golgi protein CJF59_RS12165 PF00326 Prolyl oligopeptidase family CJF59_RS12170 PF03949 Malic enzyme, NAD binding domain CJF59_RS12170 PF00390 Malic enzyme, N-terminal domain CJF59_RS12175 PF02357 Transcription termination factor nusG CJF59_RS12175 PF00467 KOW motif CJF59_RS12200 PF00213 ATP synthase delta (OSCP) subunit CJF59_RS12205 PF00306 ATP synthase alpha/beta chain, C terminal domain CJF59_RS12205 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CJF59_RS12205 PF02874 ATP synthase alpha/beta family, beta-barrel domain CJF59_RS12210 PF00231 ATP synthase CJF59_RS12215 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CJF59_RS12215 PF02874 ATP synthase alpha/beta family, beta-barrel domain CJF59_RS12220 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CJF59_RS12225 PF14489 QueF-like protein CJF59_RS12230 PF01612 3'-5' exonuclease CJF59_RS12230 PF00570 HRDC domain CJF59_RS12235 PF00294 pfkB family carbohydrate kinase CJF59_RS12250 PF00324 Amino acid permease CJF59_RS12255 PF12857 TOBE-like domain CJF59_RS12255 PF17850 CysA C-terminal regulatory domain CJF59_RS12255 PF00005 ABC transporter CJF59_RS12260 PF00528 Binding-protein-dependent transport system inner membrane component CJF59_RS12265 PF00528 Binding-protein-dependent transport system inner membrane component CJF59_RS12285 PF12833 Helix-turn-helix domain CJF59_RS12285 PF02311 AraC-like ligand binding domain CJF59_RS12290 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CJF59_RS12295 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CJF59_RS12300 PF00324 Amino acid permease CJF59_RS12310 PF00529 HlyD membrane-fusion protein of T1SS CJF59_RS12310 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJF59_RS12315 PF00873 AcrB/AcrD/AcrF family CJF59_RS12320 PF02321 Outer membrane efflux protein CJF59_RS12325 PF00313 'Cold-shock' DNA-binding domain CJF59_RS12335 PF00593 TonB dependent receptor CJF59_RS12335 PF07660 Secretin and TonB N terminus short domain CJF59_RS12335 PF07715 TonB-dependent Receptor Plug Domain CJF59_RS12345 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CJF59_RS12365 PF00795 Carbon-nitrogen hydrolase CJF59_RS12370 PF00072 Response regulator receiver domain CJF59_RS12375 PF00512 His Kinase A (phospho-acceptor) domain CJF59_RS12375 PF09308 LuxQ, periplasmic CJF59_RS12375 PF00072 Response regulator receiver domain CJF59_RS12375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJF59_RS12395 PF00005 ABC transporter CJF59_RS12395 PF12399 Branched-chain amino acid ATP-binding cassette transporter CJF59_RS12400 PF00005 ABC transporter CJF59_RS12400 PF08402 TOBE domain CJF59_RS12425 PF00239 Resolvase, N terminal domain CJF59_RS12425 PF02796 Helix-turn-helix domain of resolvase CJF59_RS12500 PF00239 Resolvase, N terminal domain CJF59_RS12500 PF02796 Helix-turn-helix domain of resolvase CJF59_RS12540 PF02661 Fic/DOC family CJF59_RS12540 PF12728 Helix-turn-helix domain CJF59_RS12545 PF02796 Helix-turn-helix domain of resolvase CJF59_RS12545 PF00239 Resolvase, N terminal domain CJF59_RS12585 PF03692 Putative zinc- or iron-chelating domain CJF59_RS12600 PF08402 TOBE domain CJF59_RS12600 PF00005 ABC transporter CJF59_RS12625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJF59_RS12625 PF00529 HlyD membrane-fusion protein of T1SS CJF59_RS12630 PF02321 Outer membrane efflux protein CJF59_RS12645 PF13243 Squalene-hopene cyclase C-terminal domain CJF59_RS12645 PF13249 Squalene-hopene cyclase N-terminal domain CJF59_RS12650 PF01593 Flavin containing amine oxidoreductase CJF59_RS12670 PF01370 NAD dependent epimerase/dehydratase family CJF59_RS12680 PF02153 Prephenate dehydrogenase CJF59_RS12690 PF00444 Ribosomal protein L36 CJF59_RS12695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_RS12695 PF03466 LysR substrate binding domain CJF59_RS12700 PF00578 AhpC/TSA family CJF59_RS12705 PF02627 Carboxymuconolactone decarboxylase family CJF59_RS12715 PF04264 YceI-like domain CJF59_RS12725 PF00719 Inorganic pyrophosphatase CJF59_RS12735 PF00005 ABC transporter CJF59_RS12735 PF12848 ABC transporter CJF59_RS12740 PF13302 Acetyltransferase (GNAT) domain CJF59_RS12755 PF05099 Tellurite resistance protein TerB CJF59_RS12755 PF00226 DnaJ domain CJF59_RS12765 PF08331 Domain of unknown function (DUF1730) CJF59_RS12770 PF01702 Queuine tRNA-ribosyltransferase CJF59_RS12775 PF02547 Queuosine biosynthesis protein CJF59_RS12785 PF01161 Phosphatidylethanolamine-binding protein CJF59_RS12800 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CJF59_RS12800 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CJF59_RS12815 PF02867 Ribonucleotide reductase, barrel domain CJF59_RS12815 PF08471 Class II vitamin B12-dependent ribonucleotide reductase CJF59_RS12840 PF02358 Trehalose-phosphatase CJF59_RS12845 PF00982 Glycosyltransferase family 20 CJF59_RS12850 PF02600 Disulfide bond formation protein DsbB CJF59_RS12865 PF00248 Aldo/keto reductase family CJF59_RS12875 PF02151 UvrB/uvrC motif CJF59_RS12875 PF17757 UvrB interaction domain CJF59_RS12875 PF04851 Type III restriction enzyme, res subunit CJF59_RS12875 PF00271 Helicase conserved C-terminal domain CJF59_RS12875 PF12344 Ultra-violet resistance protein B CJF59_RS12885 PF05193 Peptidase M16 inactive domain CJF59_RS12885 PF00675 Insulinase (Peptidase family M16) CJF59_RS12905 PF00535 Glycosyl transferase family 2 CJF59_RS12915 PF00324 Amino acid permease CJF59_RS12920 PF11799 impB/mucB/samB family C-terminal domain CJF59_RS12920 PF00817 impB/mucB/samB family CJF59_RS12930 PF01180 Dihydroorotate dehydrogenase CJF59_RS12940 PF13344 Haloacid dehalogenase-like hydrolase CJF59_RS12940 PF00293 NUDIX domain CJF59_RS12945 PF13277 YmdB-like protein CJF59_RS12950 PF01812 5-formyltetrahydrofolate cyclo-ligase family CJF59_RS12975 PF01791 DeoC/LacD family aldolase CJF59_RS12980 PF02581 Thiamine monophosphate synthase CJF59_RS13000 PF00152 tRNA synthetases class II (D, K and N) CJF59_RS13005 PF04055 Radical SAM superfamily CJF59_RS13005 PF12544 Lysine-2,3-aminomutase CJF59_RS13015 PF00557 Metallopeptidase family M24 CJF59_RS13020 PF07943 Penicillin-binding protein 5, C-terminal domain CJF59_RS13020 PF00768 D-alanyl-D-alanine carboxypeptidase CJF59_RS13025 PF02617 ATP-dependent Clp protease adaptor protein ClpS CJF59_RS13030 PF17871 AAA lid domain CJF59_RS13030 PF02861 Clp amino terminal domain, pathogenicity island component CJF59_RS13030 PF07724 AAA domain (Cdc48 subfamily) CJF59_RS13030 PF00004 ATPase family associated with various cellular activities (AAA) CJF59_RS13030 PF10431 C-terminal, D2-small domain, of ClpB protein CJF59_RS13040 PF03976 Polyphosphate kinase 2 (PPK2) CJF59_RS13045 PF02622 Uncharacterized ACR, COG1678 CJF59_RS13050 PF03668 P-loop ATPase protein family CJF59_RS13060 PF13756 Stimulus-sensing domain CJF59_RS13060 PF00672 HAMP domain CJF59_RS13060 PF13755 Sensor N-terminal transmembrane domain CJF59_RS13060 PF00512 His Kinase A (phospho-acceptor) domain CJF59_RS13060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJF59_RS13065 PF00072 Response regulator receiver domain CJF59_RS13065 PF00486 Transcriptional regulatory protein, C terminal CJF59_RS13070 PF01025 GrpE CJF59_RS13075 PF00012 Hsp70 protein CJF59_RS13080 PF01556 DnaJ C terminal domain CJF59_RS13080 PF00226 DnaJ domain CJF59_RS13080 PF00684 DnaJ central domain CJF59_RS13085 PF01113 Dihydrodipicolinate reductase, N-terminus CJF59_RS13085 PF05173 Dihydrodipicolinate reductase, C-terminus CJF59_RS13090 PF00438 S-adenosylmethionine synthetase, N-terminal domain CJF59_RS13090 PF02772 S-adenosylmethionine synthetase, central domain CJF59_RS13090 PF02773 S-adenosylmethionine synthetase, C-terminal domain CJF59_RS13095 PF02390 Putative methyltransferase CJF59_RS13100 PF02142 MGS-like domain CJF59_RS13100 PF01808 AICARFT/IMPCHase bienzyme CJF59_RS13115 PF00892 EamA-like transporter family CJF59_RS13120 PF05746 DALR anticodon binding domain CJF59_RS13120 PF02092 Glycyl-tRNA synthetase beta subunit CJF59_RS13125 PF02091 Glycyl-tRNA synthetase alpha subunit CJF59_RS13135 PF01381 Helix-turn-helix CJF59_RS13140 PF00795 Carbon-nitrogen hydrolase CJF59_RS13150 PF01475 Ferric uptake regulator family CJF59_RS13160 PF07498 Rho termination factor, N-terminal domain CJF59_RS13160 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CJF59_RS13160 PF07497 Rho termination factor, RNA-binding domain CJF59_RS13170 PF01544 CorA-like Mg2+ transporter protein CJF59_RS13175 PF00291 Pyridoxal-phosphate dependent enzyme CJF59_RS13180 PF00290 Tryptophan synthase alpha chain CJF59_RS13185 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CJF59_RS13185 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJF59_RS13195 PF13393 Histidyl-tRNA synthetase CJF59_RS13200 PF00709 Adenylosuccinate synthetase CJF59_RS13205 PF00486 Transcriptional regulatory protein, C terminal CJF59_RS13205 PF00072 Response regulator receiver domain CJF59_RS13210 PF00989 PAS fold CJF59_RS13210 PF11808 Phosphate regulon sensor protein PhoR CJF59_RS13210 PF00512 His Kinase A (phospho-acceptor) domain CJF59_RS13210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJF59_RS13215 PF12849 PBP superfamily domain CJF59_RS13235 PF00328 Histidine phosphatase superfamily (branch 2) CJF59_RS13240 PF01595 Cyclin M transmembrane N-terminal domain CJF59_RS13240 PF03471 Transporter associated domain CJF59_RS13240 PF00571 CBS domain CJF59_RS13245 PF00107 Zinc-binding dehydrogenase CJF59_RS13245 PF08240 Alcohol dehydrogenase GroES-like domain CJF59_RS13250 PF00664 ABC transporter transmembrane region CJF59_RS13250 PF03412 Peptidase C39 family CJF59_RS13250 PF00005 ABC transporter CJF59_RS13275 PF01118 Semialdehyde dehydrogenase, NAD binding domain CJF59_RS13280 PF03819 MazG nucleotide pyrophosphohydrolase domain CJF59_RS13290 PF00183 Hsp90 protein CJF59_RS13305 PF00589 Phage integrase family CJF59_RS13305 PF13495 Phage integrase, N-terminal SAM-like domain CJF59_RS13395 PF01381 Helix-turn-helix CJF59_RS13420 PF00436 Single-strand binding protein family CJF59_RS13435 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) CJF59_RS13715 PF01757 Acyltransferase family CJF59_RS13740 PF01381 Helix-turn-helix CJF59_RS13740 PF09856 Predicted transcriptional regulator (DUF2083) CJF59_RS13740 PF06114 IrrE N-terminal-like domain CJF59_RS13745 PF03972 MmgE/PrpD family CJF59_RS13750 PF00285 Citrate synthase, C-terminal domain CJF59_RS13760 PF13193 AMP-binding enzyme C-terminal domain CJF59_RS13760 PF00501 AMP-binding enzyme CJF59_RS13760 PF16177 Acetyl-coenzyme A synthetase N-terminus CJF59_RS13765 PF07690 Major Facilitator Superfamily CJF59_RS13780 PF02073 Thermophilic metalloprotease (M29) CJF59_RS13795 PF02938 GAD domain CJF59_RS13795 PF00152 tRNA synthetases class II (D, K and N) CJF59_RS13795 PF01336 OB-fold nucleic acid binding domain CJF59_RS13800 PF01212 Beta-eliminating lyase CJF59_RS13805 PF01386 Ribosomal L25p family CJF59_RS13805 PF14693 Ribosomal protein TL5, C-terminal domain CJF59_RS13810 PF01195 Peptidyl-tRNA hydrolase CJF59_RS13815 PF01926 50S ribosome-binding GTPase CJF59_RS13815 PF06071 Protein of unknown function (DUF933) CJF59_RS13820 PF00171 Aldehyde dehydrogenase family CJF59_RS13825 PF01467 Cytidylyltransferase-like CJF59_RS13835 PF02590 Predicted SPOUT methyltransferase CJF59_RS13845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_RS13845 PF03466 LysR substrate binding domain CJF59_RS13850 PF03306 Alpha-acetolactate decarboxylase CJF59_RS13855 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJF59_RS13855 PF00205 Thiamine pyrophosphate enzyme, central domain CJF59_RS13855 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJF59_RS13865 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJF59_RS13865 PF00205 Thiamine pyrophosphate enzyme, central domain CJF59_RS13865 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJF59_RS13870 PF02754 Cysteine-rich domain CJF59_RS13875 PF02589 LUD domain CJF59_RS13875 PF13183 4Fe-4S dicluster domain CJF59_RS13875 PF11870 Domain of unknown function (DUF3390) CJF59_RS13885 PF13536 Putative multidrug resistance efflux transporter CJF59_RS13890 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CJF59_RS13895 PF00692 dUTPase CJF59_RS13910 PF04794 YdjC-like protein CJF59_RS13945 PF04055 Radical SAM superfamily CJF59_RS13945 PF06463 Molybdenum Cofactor Synthesis C CJF59_RS13950 PF00571 CBS domain CJF59_RS13950 PF03471 Transporter associated domain CJF59_RS13950 PF01595 Cyclin M transmembrane N-terminal domain CJF59_RS13955 PF01464 Transglycosylase SLT domain CJF59_RS13960 PF03167 Uracil DNA glycosylase superfamily CJF59_RS13970 PF00288 GHMP kinases N terminal domain CJF59_RS13970 PF08544 GHMP kinases C terminal CJF59_RS13980 PF00106 short chain dehydrogenase CJF59_RS13995 PF01554 MatE CJF59_RS14000 PF00005 ABC transporter CJF59_RS14010 PF14572 Phosphoribosyl synthetase-associated domain CJF59_RS14010 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CJF59_RS14055 PF03466 LysR substrate binding domain CJF59_RS14055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_RS14060 PF00999 Sodium/hydrogen exchanger family CJF59_RS14065 PF00593 TonB dependent receptor CJF59_RS14065 PF07715 TonB-dependent Receptor Plug Domain CJF59_RS14075 PF01032 FecCD transport family CJF59_RS14080 PF00005 ABC transporter CJF59_RS14085 PF00728 Glycosyl hydrolase family 20, catalytic domain CJF59_RS14085 PF02838 Glycosyl hydrolase family 20, domain 2 CJF59_RS14085 PF07691 PA14 domain CJF59_RS14090 PF01869 BadF/BadG/BcrA/BcrD ATPase family CJF59_RS14095 PF13580 SIS domain CJF59_RS14115 PF03441 FAD binding domain of DNA photolyase CJF59_RS14115 PF00875 DNA photolyase CJF59_RS14120 PF01641 SelR domain CJF59_RS14135 PF00155 Aminotransferase class I and II CJF59_RS14150 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CJF59_RS14150 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CJF59_RS14180 PF03466 LysR substrate binding domain CJF59_RS14180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_RS14190 PF07291 Methylamine utilisation protein MauE CJF59_RS14195 PF00578 AhpC/TSA family CJF59_RS14200 PF02975 Methylamine dehydrogenase, L chain CJF59_RS14215 PF00578 AhpC/TSA family CJF59_RS14225 PF00248 Aldo/keto reductase family CJF59_RS14230 PF03466 LysR substrate binding domain CJF59_RS14230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_RS14235 PF00171 Aldehyde dehydrogenase family CJF59_RS14240 PF00034 Cytochrome c CJF59_RS14240 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CJF59_RS14245 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CJF59_RS14250 PF01799 [2Fe-2S] binding domain CJF59_RS14250 PF00111 2Fe-2S iron-sulfur cluster binding domain CJF59_RS14295 PF00239 Resolvase, N terminal domain CJF59_RS14295 PF02796 Helix-turn-helix domain of resolvase CJF59_RS14335 PF13098 Thioredoxin-like domain CJF59_RS14400 PF05016 ParE toxin of type II toxin-antitoxin system, parDE CJF59_RS14425 PF01527 Transposase CJF59_RS14440 PF13439 Glycosyltransferase Family 4 CJF59_RS14440 PF00534 Glycosyl transferases group 1 CJF59_RS14475 PF13817 IS66 C-terminal element CJF59_RS14475 PF13005 zinc-finger binding domain of transposase IS66 CJF59_RS14475 PF03050 Transposase IS66 family CJF59_RS14475 PF13007 Transposase C of IS166 homeodomain CJF59_RS14485 PF01527 Transposase CJF59_RS14535 PF13276 HTH-like domain CJF59_RS14535 PF00665 Integrase core domain CJF59_RS14535 PF13333 Integrase core domain CJF59_RS14610 PF01475 Ferric uptake regulator family CJF59_RS14620 PF01227 GTP cyclohydrolase I CJF59_RS14625 PF01502 Phosphoribosyl-AMP cyclohydrolase CJF59_RS14630 PF07683 Cobalamin synthesis protein cobW C-terminal domain CJF59_RS14630 PF02492 CobW/HypB/UreG, nucleotide-binding domain CJF59_RS14645 PF11800 Replication protein C C-terminal region CJF59_RS14645 PF03428 Replication protein C N-terminal domain CJF59_RS14675 PF03547 Membrane transport protein CJF59_RS14685 PF13340 Putative transposase of IS4/5 family (DUF4096) CJF59_RS14700 PF02371 Transposase IS116/IS110/IS902 family CJF59_RS14700 PF01548 Transposase CJF59_RS14715 PF02515 CoA-transferase family III CJF59_RS14720 PF00205 Thiamine pyrophosphate enzyme, central domain CJF59_RS14720 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJF59_RS14720 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJF59_RS14725 PF02515 CoA-transferase family III CJF59_RS14785 PF02082 Transcriptional regulator CJF59_RS14795 PF12833 Helix-turn-helix domain CJF59_RS14795 PF01965 DJ-1/PfpI family CJF59_RS14800 PF00106 short chain dehydrogenase CJF59_RS14805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_RS14805 PF03466 LysR substrate binding domain CJF59_RS14825 PF01845 CcdB protein CJF59_RS14845 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system CJF59_RS14850 PF00756 Putative esterase CJF59_RS14860 PF08240 Alcohol dehydrogenase GroES-like domain CJF59_RS14860 PF00107 Zinc-binding dehydrogenase CJF59_RS14865 PF02583 Metal-sensitive transcriptional repressor CJF59_RS14910 PF17762 HTH domain found in ParB protein CJF59_RS14910 PF02195 ParB-like nuclease domain CJF59_RS14945 PF18818 Metallopeptidase superfamily domain CJF59_RS14945 PF08401 Domain of unknown function (DUF1738) CJF59_RS14960 PF00436 Single-strand binding protein family CJF59_RS14975 PF00580 UvrD/REP helicase N-terminal domain CJF59_RS14975 PF13361 UvrD-like helicase C-terminal domain CJF59_RS15010 PF11867 Domain of unknown function (DUF3387) CJF59_RS15010 PF18766 SWI2/SNF2 ATPase CJF59_RS15010 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CJF59_RS15025 PF01420 Type I restriction modification DNA specificity domain CJF59_RS15030 PF01909 Nucleotidyltransferase domain CJF59_RS15040 PF02384 N-6 DNA Methylase CJF59_RS15065 PF01381 Helix-turn-helix CJF59_RS15115 PF05443 ROS/MUCR transcriptional regulator protein CJF59_RS15150 PF00436 Single-strand binding protein family CJF59_RS15170 PF01850 PIN domain CJF59_RS15230 PF00216 Bacterial DNA-binding protein CJF59_RS15240 PF02796 Helix-turn-helix domain of resolvase CJF59_RS15240 PF00239 Resolvase, N terminal domain CJF59_RS15265 PF00535 Glycosyl transferase family 2 CJF59_RS15295 PF05016 ParE toxin of type II toxin-antitoxin system, parDE CJF59_RS15305 PF02661 Fic/DOC family CJF59_RS15315 PF11800 Replication protein C C-terminal region CJF59_RS15315 PF03428 Replication protein C N-terminal domain CJF59_RS15325 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) CJF59_RS15330 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system CJF59_RS15355 PF00239 Resolvase, N terminal domain CJF59_RS15355 PF02796 Helix-turn-helix domain of resolvase CJF59_RS15385 PF01381 Helix-turn-helix CJF59_RS15395 PF02384 N-6 DNA Methylase CJF59_RS15395 PF12161 HsdM N-terminal domain CJF59_RS15400 PF01420 Type I restriction modification DNA specificity domain CJF59_RS15405 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CJF59_RS15405 PF11867 Domain of unknown function (DUF3387) CJF59_RS15405 PF18766 SWI2/SNF2 ATPase CJF59_RS15415 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CJF59_RS15420 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system