locus-tag class description acear_RS00005 PF00308 Bacterial dnaA protein acear_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix acear_RS00005 PF11638 DnaA N-terminal domain acear_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain acear_RS00010 PF02767 DNA polymerase III beta subunit, central domain acear_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain acear_RS00020 PF02463 RecF/RecN/SMC N terminal domain acear_RS00030 PF04025 Domain of unknown function (DUF370) acear_RS00035 PF00986 DNA gyrase B subunit, carboxyl terminus acear_RS00035 PF00204 DNA gyrase B acear_RS00035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase acear_RS00035 PF01751 Toprim domain acear_RS00040 PF00521 DNA gyrase/topoisomerase IV, subunit A acear_RS00040 PF03989 DNA gyrase C-terminal domain, beta-propeller acear_RS00070 PF00578 AhpC/TSA family acear_RS00075 PF01343 Peptidase family S49 acear_RS00085 PF17910 FeoB cytosolic helical domain acear_RS00085 PF07664 Ferrous iron transport protein B C terminus acear_RS00085 PF02421 Ferrous iron transport protein B acear_RS00085 PF07670 Nucleoside recognition acear_RS00090 PF02421 Ferrous iron transport protein B acear_RS00090 PF07670 Nucleoside recognition acear_RS00090 PF07664 Ferrous iron transport protein B C terminus acear_RS00090 PF17910 FeoB cytosolic helical domain acear_RS00095 PF01325 Iron dependent repressor, N-terminal DNA binding domain acear_RS00095 PF02742 Iron dependent repressor, metal binding and dimerisation domain acear_RS00135 PF05067 Manganese containing catalase acear_RS00140 PF12652 CotJB protein acear_RS00155 PF00266 Aminotransferase class-V acear_RS00160 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain acear_RS00160 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain acear_RS00160 PF01842 ACT domain acear_RS00165 PF02403 Seryl-tRNA synthetase N-terminal domain acear_RS00165 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) acear_RS00190 PF14437 MafB19-like deaminase acear_RS00200 PF12169 DNA polymerase III subunits gamma and tau domain III acear_RS00205 PF02575 YbaB/EbfC DNA-binding family acear_RS00210 PF13662 Toprim domain acear_RS00210 PF02132 RecR protein acear_RS00220 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase acear_RS00225 PF00037 4Fe-4S binding domain acear_RS00230 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II acear_RS00230 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg acear_RS00235 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain acear_RS00240 PF00037 4Fe-4S binding domain acear_RS00255 PF00571 CBS domain acear_RS00255 PF00478 IMP dehydrogenase / GMP reductase domain acear_RS00260 PF02223 Thymidylate kinase acear_RS00265 PF03885 Protein of unknown function (DUF327) acear_RS00270 PF09115 DNA polymerase III, delta subunit, C terminal acear_RS00275 PF04468 PSP1 C-terminal conserved region acear_RS00280 PF06156 Initiation control protein YabA acear_RS00285 PF05175 Methyltransferase small domain acear_RS00290 PF01541 GIY-YIG catalytic domain acear_RS00295 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases acear_RS00300 PF18277 AbrB C-terminal domain acear_RS00300 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin acear_RS00315 PF01588 Putative tRNA binding domain acear_RS00315 PF09334 tRNA synthetases class I (M) acear_RS00315 PF08264 Anticodon-binding domain of tRNA acear_RS00320 PF01026 TatD related DNase acear_RS00330 PF00923 Transaldolase/Fructose-6-phosphate aldolase acear_RS00335 PF00398 Ribosomal RNA adenine dimethylase acear_RS00345 PF06257 Biofilm formation stimulator VEG acear_RS00350 PF01614 Bacterial transcriptional regulator acear_RS00350 PF09339 IclR helix-turn-helix domain acear_RS00355 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase acear_RS00355 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain acear_RS00360 PF00175 Oxidoreductase NAD-binding domain acear_RS00360 PF00970 Oxidoreductase FAD-binding domain acear_RS00360 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B acear_RS00365 PF07992 Pyridine nucleotide-disulphide oxidoreductase acear_RS00365 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region acear_RS00365 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster acear_RS00380 PF07664 Ferrous iron transport protein B C terminus acear_RS00380 PF07670 Nucleoside recognition acear_RS00380 PF02421 Ferrous iron transport protein B acear_RS00380 PF17910 FeoB cytosolic helical domain acear_RS00415 PF01235 Sodium:alanine symporter family acear_RS00440 PF01476 LysM domain acear_RS00445 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain acear_RS00445 PF17770 Ribonuclease J C-terminal domain acear_RS00445 PF00753 Metallo-beta-lactamase superfamily acear_RS00450 PF03734 L,D-transpeptidase catalytic domain acear_RS00450 PF01476 LysM domain acear_RS00455 PF08544 GHMP kinases C terminal acear_RS00455 PF00288 GHMP kinases N terminal domain acear_RS00465 PF09182 Bacterial purine repressor, N-terminal acear_RS00465 PF00156 Phosphoribosyl transferase domain acear_RS00475 PF13411 MerR HTH family regulatory protein acear_RS00480 PF07969 Amidohydrolase family acear_RS00485 PF12804 MobA-like NTP transferase domain acear_RS00485 PF00132 Bacterial transferase hexapeptide (six repeats) acear_RS00490 PF14572 Phosphoribosyl synthetase-associated domain acear_RS00490 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase acear_RS00495 PF14693 Ribosomal protein TL5, C-terminal domain acear_RS00495 PF01386 Ribosomal L25p family acear_RS00500 PF01195 Peptidyl-tRNA hydrolase acear_RS00510 PF02559 CarD-like/TRCF domain acear_RS00510 PF00270 DEAD/DEAH box helicase acear_RS00510 PF00271 Helicase conserved C-terminal domain acear_RS00510 PF03461 TRCF domain acear_RS00510 PF17757 UvrB interaction domain acear_RS00515 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin acear_RS00515 PF15714 Stage V sporulation protein T C-terminal, transcription factor acear_RS00520 PF01943 Polysaccharide biosynthesis protein acear_RS00520 PF14667 Polysaccharide biosynthesis C-terminal domain acear_RS00525 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases acear_RS00525 PF03819 MazG nucleotide pyrophosphohydrolase domain acear_RS00530 PF07943 Penicillin-binding protein 5, C-terminal domain acear_RS00530 PF00768 D-alanyl-D-alanine carboxypeptidase acear_RS00535 PF08486 Stage II sporulation protein acear_RS00555 PF16921 Tex protein YqgF-like domain acear_RS00555 PF09371 Tex-like protein N-terminal domain acear_RS00555 PF00575 S1 RNA binding domain acear_RS00555 PF17674 HHH domain acear_RS00560 PF00575 S1 RNA binding domain acear_RS00565 PF12849 PBP superfamily domain acear_RS00570 PF00528 Binding-protein-dependent transport system inner membrane component acear_RS00575 PF00528 Binding-protein-dependent transport system inner membrane component acear_RS00590 PF02541 Ppx/GppA phosphatase family acear_RS00610 PF07228 Stage II sporulation protein E (SpoIIE) acear_RS00615 PF11734 TilS substrate C-terminal domain acear_RS00615 PF01171 PP-loop family acear_RS00620 PF01171 PP-loop family acear_RS00620 PF11734 TilS substrate C-terminal domain acear_RS00620 PF00156 Phosphoribosyl transferase domain acear_RS00625 PF17862 AAA+ lid domain acear_RS00625 PF06480 FtsH Extracellular acear_RS00625 PF01434 Peptidase family M41 acear_RS00625 PF00004 ATPase family associated with various cellular activities (AAA) acear_RS00630 PF01268 Formate--tetrahydrofolate ligase acear_RS00640 PF02548 Ketopantoate hydroxymethyltransferase acear_RS00645 PF02569 Pantoate-beta-alanine ligase acear_RS00650 PF02261 Aspartate decarboxylase acear_RS00655 PF03099 Biotin/lipoate A/B protein ligase family acear_RS00655 PF02237 Biotin protein ligase C terminal domain acear_RS00655 PF08279 HTH domain acear_RS00660 PF03309 Type III pantothenate kinase acear_RS00665 PF01207 Dihydrouridine synthase (Dus) acear_RS00675 PF00202 Aminotransferase class-III acear_RS00680 PF01272 Transcription elongation factor, GreA/GreB, C-term acear_RS00680 PF03449 Transcription elongation factor, N-terminal acear_RS00685 PF00152 tRNA synthetases class II (D, K and N) acear_RS00685 PF01336 OB-fold nucleic acid binding domain acear_RS00690 PF02583 Metal-sensitive transcriptional repressor acear_RS00765 PF05848 CtsR N-terminal HTH domain acear_RS00765 PF17727 CtsR C-terminal dimerization domain acear_RS00770 PF02151 UvrB/uvrC motif acear_RS00775 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain acear_RS00780 PF00004 ATPase family associated with various cellular activities (AAA) acear_RS00780 PF07724 AAA domain (Cdc48 subfamily) acear_RS00780 PF17871 AAA lid domain acear_RS00780 PF02861 Clp amino terminal domain, pathogenicity island component acear_RS00780 PF10431 C-terminal, D2-small domain, of ClpB protein acear_RS00785 PF18073 Rubredoxin metal binding domain acear_RS00790 PF10635 DisA bacterial checkpoint controller linker region acear_RS00790 PF02457 DisA bacterial checkpoint controller nucleotide-binding acear_RS00790 PF12826 Helix-hairpin-helix motif acear_RS00795 PF02559 CarD-like/TRCF domain acear_RS00805 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase acear_RS00810 PF02542 YgbB family acear_RS00815 PF00571 CBS domain acear_RS00815 PF00478 IMP dehydrogenase / GMP reductase domain acear_RS00820 PF00749 tRNA synthetases class I (E and Q), catalytic domain acear_RS00825 PF00132 Bacterial transferase hexapeptide (six repeats) acear_RS00825 PF06426 Serine acetyltransferase, N-terminal acear_RS00830 PF09190 DALR domain acear_RS00830 PF01406 tRNA synthetases class I (C) catalytic domain acear_RS00835 PF00636 Ribonuclease III domain acear_RS00840 PF02511 Thymidylate synthase complementing protein acear_RS00845 PF08032 RNA 2'-O ribose methyltransferase substrate binding acear_RS00845 PF00588 SpoU rRNA Methylase family acear_RS00855 PF04542 Sigma-70 region 2 acear_RS00855 PF08281 Sigma-70, region 4 acear_RS00865 PF03144 Elongation factor Tu domain 2 acear_RS00865 PF03143 Elongation factor Tu C-terminal domain acear_RS00865 PF00009 Elongation factor Tu GTP binding domain acear_RS00870 PF00471 Ribosomal protein L33 acear_RS00875 PF00584 SecE/Sec61-gamma subunits of protein translocation complex acear_RS00880 PF00467 KOW motif acear_RS00880 PF02357 Transcription termination factor nusG acear_RS00885 PF00298 Ribosomal protein L11, RNA binding domain acear_RS00885 PF03946 Ribosomal protein L11, N-terminal domain acear_RS00890 PF00687 Ribosomal protein L1p/L10e family acear_RS00895 PF00466 Ribosomal protein L10 acear_RS00900 PF16320 Ribosomal protein L7/L12 dimerisation domain acear_RS00900 PF00542 Ribosomal protein L7/L12 C-terminal domain acear_RS00905 PF04565 RNA polymerase Rpb2, domain 3 acear_RS00905 PF04563 RNA polymerase beta subunit acear_RS00905 PF00562 RNA polymerase Rpb2, domain 6 acear_RS00905 PF04560 RNA polymerase Rpb2, domain 7 acear_RS00905 PF10385 RNA polymerase beta subunit external 1 domain acear_RS00905 PF04561 RNA polymerase Rpb2, domain 2 acear_RS00910 PF04997 RNA polymerase Rpb1, domain 1 acear_RS00910 PF04998 RNA polymerase Rpb1, domain 5 acear_RS00910 PF05000 RNA polymerase Rpb1, domain 4 acear_RS00910 PF04983 RNA polymerase Rpb1, domain 3 acear_RS00910 PF00623 RNA polymerase Rpb1, domain 2 acear_RS00915 PF00164 Ribosomal protein S12/S23 acear_RS00920 PF00177 Ribosomal protein S7p/S5e acear_RS00925 PF03764 Elongation factor G, domain IV acear_RS00925 PF00679 Elongation factor G C-terminus acear_RS00925 PF14492 Elongation Factor G, domain II acear_RS00925 PF03144 Elongation factor Tu domain 2 acear_RS00925 PF00009 Elongation factor Tu GTP binding domain acear_RS00930 PF00009 Elongation factor Tu GTP binding domain acear_RS00930 PF03144 Elongation factor Tu domain 2 acear_RS00930 PF03143 Elongation factor Tu C-terminal domain acear_RS00935 PF00338 Ribosomal protein S10p/S20e acear_RS00940 PF00297 Ribosomal protein L3 acear_RS00945 PF00573 Ribosomal protein L4/L1 family acear_RS00950 PF00276 Ribosomal protein L23 acear_RS00955 PF03947 Ribosomal Proteins L2, C-terminal domain acear_RS00955 PF00181 Ribosomal Proteins L2, RNA binding domain acear_RS00960 PF00203 Ribosomal protein S19 acear_RS00965 PF00237 Ribosomal protein L22p/L17e acear_RS00970 PF00189 Ribosomal protein S3, C-terminal domain acear_RS00970 PF07650 KH domain acear_RS00975 PF00252 Ribosomal protein L16p/L10e acear_RS00980 PF00831 Ribosomal L29 protein acear_RS00985 PF00366 Ribosomal protein S17 acear_RS00990 PF00238 Ribosomal protein L14p/L23e acear_RS00995 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 acear_RS00995 PF00467 KOW motif acear_RS01000 PF00281 Ribosomal protein L5 acear_RS01000 PF00673 ribosomal L5P family C-terminus acear_RS01005 PF00253 Ribosomal protein S14p/S29e acear_RS01010 PF00410 Ribosomal protein S8 acear_RS01015 PF00347 Ribosomal protein L6 acear_RS01020 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast acear_RS01025 PF03719 Ribosomal protein S5, C-terminal domain acear_RS01025 PF00333 Ribosomal protein S5, N-terminal domain acear_RS01030 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A acear_RS01035 PF00344 SecY translocase acear_RS01040 PF05191 Adenylate kinase, active site lid acear_RS01045 PF00557 Metallopeptidase family M24 acear_RS01050 PF01176 Translation initiation factor 1A / IF-1 acear_RS01055 PF00444 Ribosomal protein L36 acear_RS01060 PF00416 Ribosomal protein S13/S18 acear_RS01065 PF00411 Ribosomal protein S11 acear_RS01070 PF01479 S4 domain acear_RS01070 PF00163 Ribosomal protein S4/S9 N-terminal domain acear_RS01075 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain acear_RS01075 PF01000 RNA polymerase Rpb3/RpoA insert domain acear_RS01075 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain acear_RS01080 PF01196 Ribosomal protein L17 acear_RS01085 PF00005 ABC transporter acear_RS01090 PF00005 ABC transporter acear_RS01095 PF02361 Cobalt transport protein acear_RS01100 PF01416 tRNA pseudouridine synthase acear_RS01105 PF00572 Ribosomal protein L13 acear_RS01110 PF00380 Ribosomal protein S9/S16 acear_RS01115 PF00491 Arginase family acear_RS01120 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase acear_RS01120 PF01871 AMMECR1 acear_RS01130 PF00011 Hsp20/alpha crystallin family acear_RS01135 PF00155 Aminotransferase class I and II acear_RS01145 PF02913 FAD linked oxidases, C-terminal domain acear_RS01145 PF01565 FAD binding domain acear_RS01145 PF13183 4Fe-4S dicluster domain acear_RS01150 PF00920 Dehydratase family acear_RS01155 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain acear_RS01155 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain acear_RS01155 PF00205 Thiamine pyrophosphate enzyme, central domain acear_RS01160 PF10369 Small subunit of acetolactate synthase acear_RS01165 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain acear_RS01165 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain acear_RS01170 PF08502 LeuA allosteric (dimerisation) domain acear_RS01170 PF00682 HMGL-like acear_RS01175 PF00330 Aconitase family (aconitate hydratase) acear_RS01180 PF00694 Aconitase C-terminal domain acear_RS01185 PF00180 Isocitrate/isopropylmalate dehydrogenase acear_RS01190 PF08502 LeuA allosteric (dimerisation) domain acear_RS01190 PF00682 HMGL-like acear_RS01195 PF00939 Sodium:sulfate symporter transmembrane region acear_RS01215 PF01238 Phosphomannose isomerase type I acear_RS01220 PF08486 Stage II sporulation protein acear_RS01220 PF08486 Stage II sporulation protein acear_RS01225 PF02811 PHP domain acear_RS01235 PF01966 HD domain acear_RS01235 PF00072 Response regulator receiver domain acear_RS01240 PF08645 Polynucleotide kinase 3 phosphatase acear_RS01245 PF00294 pfkB family carbohydrate kinase acear_RS01245 PF01467 Cytidylyltransferase-like acear_RS01250 PF01467 Cytidylyltransferase-like acear_RS01250 PF00294 pfkB family carbohydrate kinase acear_RS01260 PF00672 HAMP domain acear_RS01260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain acear_RS01260 PF02743 Cache domain acear_RS01270 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit acear_RS01270 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region acear_RS01270 PF10531 SLBB domain acear_RS01275 PF02906 Iron only hydrogenase large subunit, C-terminal domain acear_RS01275 PF02256 Iron hydrogenase small subunit acear_RS01275 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region acear_RS01275 PF00037 4Fe-4S binding domain acear_RS01280 PF05384 Sensor protein DegS acear_RS01280 PF07730 Histidine kinase acear_RS01280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase acear_RS01310 PF00263 Bacterial type II and III secretion system protein acear_RS01310 PF03958 Bacterial type II/III secretion system short domain acear_RS01315 PF00072 Response regulator receiver domain acear_RS01315 PF00196 Bacterial regulatory proteins, luxR family acear_RS01320 PF00437 Type II/IV secretion system protein acear_RS01345 PF08281 Sigma-70, region 4 acear_RS01345 PF04542 Sigma-70 region 2 acear_RS01350 PF00271 Helicase conserved C-terminal domain acear_RS01350 PF04851 Type III restriction enzyme, res subunit acear_RS01355 PF00156 Phosphoribosyl transferase domain acear_RS01390 PF02623 FliW protein acear_RS01395 PF02599 Global regulator protein family acear_RS01400 PF00700 Bacterial flagellin C-terminal helical region acear_RS01400 PF00669 Bacterial flagellin N-terminal helical region acear_RS01405 PF07196 Flagellin hook IN motif acear_RS01405 PF07195 Flagellar hook-associated protein 2 C-terminus acear_RS01405 PF02465 Flagellar hook-associated protein 2 N-terminus acear_RS01410 PF00535 Glycosyl transferase family 2 acear_RS01425 PF02561 Flagellar protein FliS acear_RS01460 PF02540 NAD synthase acear_RS01465 PF00731 AIR carboxylase acear_RS01470 PF01969 Protein of unknown function DUF111 acear_RS01490 PF00037 4Fe-4S binding domain acear_RS01490 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit acear_RS01490 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region acear_RS01495 PF00037 4Fe-4S binding domain acear_RS01495 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region acear_RS01495 PF02906 Iron only hydrogenase large subunit, C-terminal domain acear_RS01495 PF02256 Iron hydrogenase small subunit acear_RS01500 PF00497 Bacterial extracellular solute-binding proteins, family 3 acear_RS01505 PF00528 Binding-protein-dependent transport system inner membrane component acear_RS01510 PF00005 ABC transporter acear_RS01515 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus acear_RS01515 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein acear_RS01520 PF02810 SEC-C motif acear_RS01520 PF07517 SecA DEAD-like domain acear_RS01520 PF01043 SecA preprotein cross-linking domain acear_RS01520 PF07516 SecA Wing and Scaffold domain acear_RS01525 PF03462 PCRF domain acear_RS01525 PF00472 RF-1 domain acear_RS01545 PF03808 Glycosyl transferase WecB/TagA/CpsF family acear_RS01550 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) acear_RS01550 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 acear_RS01555 PF00456 Transketolase, thiamine diphosphate binding domain acear_RS01560 PF02780 Transketolase, C-terminal domain acear_RS01560 PF02779 Transketolase, pyrimidine binding domain acear_RS01565 PF03572 Peptidase family S41 acear_RS01565 PF13180 PDZ domain acear_RS01575 PF17757 UvrB interaction domain acear_RS01575 PF00271 Helicase conserved C-terminal domain acear_RS01575 PF12344 Ultra-violet resistance protein B acear_RS01575 PF02151 UvrB/uvrC motif acear_RS01575 PF04851 Type III restriction enzyme, res subunit acear_RS01580 PF17760 UvrA interaction domain acear_RS01580 PF17755 UvrA DNA-binding domain acear_RS01585 PF08459 UvrC Helix-hairpin-helix N-terminal acear_RS01585 PF01541 GIY-YIG catalytic domain acear_RS01585 PF12826 Helix-hairpin-helix motif acear_RS01585 PF02151 UvrB/uvrC motif acear_RS01600 PF00294 pfkB family carbohydrate kinase acear_RS01615 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain acear_RS01615 PF00056 lactate/malate dehydrogenase, NAD binding domain acear_RS01620 PF02583 Metal-sensitive transcriptional repressor acear_RS01635 PF00962 Adenosine/AMP deaminase acear_RS01640 PF10079 Bacillithiol biosynthesis BshC acear_RS01645 PF02585 GlcNAc-PI de-N-acetylase acear_RS01650 PF00534 Glycosyl transferases group 1 acear_RS01650 PF13439 Glycosyltransferase Family 4 acear_RS01655 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III acear_RS01655 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain acear_RS01655 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I acear_RS01655 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II acear_RS01665 PF01642 Methylmalonyl-CoA mutase acear_RS01665 PF02310 B12 binding domain acear_RS01670 PF00480 ROK family acear_RS01690 PF03065 Glycosyl hydrolase family 57 acear_RS01690 PF09210 Domain of unknown function (DUF1957) acear_RS01695 PF00534 Glycosyl transferases group 1 acear_RS01695 PF13439 Glycosyltransferase Family 4 acear_RS01700 PF00483 Nucleotidyl transferase acear_RS01710 PF02811 PHP domain acear_RS01720 PF02811 PHP domain acear_RS01725 PF03668 P-loop ATPase protein family acear_RS01730 PF01933 Uncharacterised protein family UPF0052 acear_RS01735 PF14527 WhiA LAGLIDADG-like domain acear_RS01735 PF10298 WhiA N-terminal LAGLIDADG-like domain acear_RS01735 PF02650 WhiA C-terminal HTH domain acear_RS01740 PF04552 Sigma-54, DNA binding domain acear_RS01740 PF04963 Sigma-54 factor, core binding domain acear_RS01740 PF00309 Sigma-54 factor, Activator interacting domain (AID) acear_RS01750 PF04198 Putative sugar-binding domain acear_RS01755 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain acear_RS01755 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain acear_RS01760 PF00162 Phosphoglycerate kinase acear_RS01765 PF00121 Triosephosphate isomerase acear_RS01770 PF01676 Metalloenzyme superfamily acear_RS01770 PF06415 BPG-independent PGAM N-terminus (iPGM_N) acear_RS01775 PF00113 Enolase, C-terminal TIM barrel domain acear_RS01775 PF03952 Enolase, N-terminal domain acear_RS01780 PF03840 Preprotein translocase SecG subunit acear_RS01785 PF03030 Inorganic H+ pyrophosphatase acear_RS01805 PF00575 S1 RNA binding domain acear_RS01805 PF00773 RNB domain acear_RS01805 PF08206 Ribonuclease B OB domain acear_RS01805 PF17876 Cold shock domain acear_RS01810 PF01668 SmpB protein acear_RS01820 PF00072 Response regulator receiver domain acear_RS01820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase acear_RS01820 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) acear_RS01820 PF01627 Hpt domain acear_RS01820 PF00512 His Kinase A (phospho-acceptor) domain acear_RS01820 PF00672 HAMP domain acear_RS01835 PF00395 S-layer homology domain acear_RS01835 PF00963 Cohesin domain acear_RS01850 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain acear_RS01850 PF01367 5'-3' exonuclease, C-terminal SAM fold acear_RS01850 PF00476 DNA polymerase family A acear_RS01855 PF01523 Putative modulator of DNA gyrase acear_RS01860 PF01523 Putative modulator of DNA gyrase acear_RS01865 PF01545 Cation efflux family acear_RS01865 PF16916 Dimerisation domain of Zinc Transporter acear_RS01870 PF02659 Putative manganese efflux pump acear_RS01875 PF01121 Dephospho-CoA kinase acear_RS01880 PF02142 MGS-like domain acear_RS01885 PF01464 Transglycosylase SLT domain acear_RS01895 PF00586 AIR synthase related protein, N-terminal domain acear_RS01895 PF02769 AIR synthase related protein, C-terminal domain acear_RS01910 PF06253 Trimethylamine methyltransferase (MTTB) acear_RS01915 PF06253 Trimethylamine methyltransferase (MTTB) acear_RS01920 PF02607 B12 binding domain acear_RS01920 PF02310 B12 binding domain acear_RS01935 PF06968 Biotin and Thiamin Synthesis associated domain acear_RS01935 PF04055 Radical SAM superfamily acear_RS01940 PF05378 Hydantoinase/oxoprolinase N-terminal region acear_RS01940 PF01968 Hydantoinase/oxoprolinase acear_RS01945 PF07478 D-ala D-ala ligase C-terminus acear_RS01945 PF01820 D-ala D-ala ligase N-terminus acear_RS01955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family acear_RS01955 PF03466 LysR substrate binding domain acear_RS01965 PF13375 RnfC Barrel sandwich hybrid domain acear_RS01965 PF12838 4Fe-4S dicluster domain acear_RS01965 PF10531 SLBB domain acear_RS01965 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit acear_RS01970 PF03116 NQR2, RnfD, RnfE family acear_RS01980 PF02508 Rnf-Nqr subunit, membrane protein acear_RS01985 PF02508 Rnf-Nqr subunit, membrane protein acear_RS01990 PF00970 Oxidoreductase FAD-binding domain acear_RS01990 PF00111 2Fe-2S iron-sulfur cluster binding domain acear_RS01990 PF00175 Oxidoreductase NAD-binding domain acear_RS02005 PF03129 Anticodon binding domain acear_RS02005 PF04073 Aminoacyl-tRNA editing domain acear_RS02005 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) acear_RS02015 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain acear_RS02015 PF06827 Zinc finger found in FPG and IleRS acear_RS02015 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain acear_RS02020 PF00005 ABC transporter acear_RS02020 PF12848 ABC transporter acear_RS02020 PF16326 ABC transporter C-terminal domain acear_RS02025 PF12704 MacB-like periplasmic core domain acear_RS02025 PF02687 FtsX-like permease family acear_RS02025 PF00005 ABC transporter acear_RS02030 PF12704 MacB-like periplasmic core domain acear_RS02030 PF00005 ABC transporter acear_RS02030 PF02687 FtsX-like permease family acear_RS02035 PF12704 MacB-like periplasmic core domain acear_RS02035 PF02687 FtsX-like permease family acear_RS02055 PF00301 Rubredoxin acear_RS02060 PF00753 Metallo-beta-lactamase superfamily acear_RS02060 PF00258 Flavodoxin acear_RS02070 PF00313 'Cold-shock' DNA-binding domain acear_RS02075 PF07486 Cell Wall Hydrolase acear_RS02075 PF01471 Putative peptidoglycan binding domain acear_RS02080 PF14620 YpeB sporulation acear_RS02100 PF02080 TrkA-C domain acear_RS02100 PF02254 TrkA-N domain acear_RS02105 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) acear_RS02105 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain acear_RS02105 PF03129 Anticodon binding domain acear_RS02105 PF02824 TGS domain acear_RS02110 PF00707 Translation initiation factor IF-3, C-terminal domain acear_RS02110 PF05198 Translation initiation factor IF-3, N-terminal domain acear_RS02115 PF01632 Ribosomal protein L35 acear_RS02120 PF00453 Ribosomal protein L20 acear_RS02125 PF02386 Cation transport protein acear_RS02130 PF02254 TrkA-N domain acear_RS02130 PF02080 TrkA-C domain acear_RS02135 PF02386 Cation transport protein acear_RS02140 PF02254 TrkA-N domain acear_RS02140 PF02080 TrkA-C domain acear_RS02145 PF00588 SpoU rRNA Methylase family acear_RS02145 PF08032 RNA 2'-O ribose methyltransferase substrate binding acear_RS02150 PF01409 tRNA synthetases class II core domain (F) acear_RS02150 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain acear_RS02155 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain acear_RS02155 PF03147 Ferredoxin-fold anticodon binding domain acear_RS02155 PF03483 B3/4 domain acear_RS02155 PF01588 Putative tRNA binding domain acear_RS02155 PF03484 tRNA synthetase B5 domain acear_RS02205 PF14791 DNA polymerase beta thumb acear_RS02205 PF14716 Helix-hairpin-helix domain acear_RS02205 PF02811 PHP domain acear_RS02215 PF01713 Smr domain acear_RS02215 PF00488 MutS domain V acear_RS02225 PF00912 Transglycosylase acear_RS02225 PF00905 Penicillin binding protein transpeptidase domain acear_RS02230 PF01479 S4 domain acear_RS02230 PF00579 tRNA synthetases class I (W and Y) acear_RS02250 PF01594 AI-2E family transporter acear_RS02255 PF02272 DHHA1 domain acear_RS02255 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain acear_RS02255 PF01411 tRNA synthetases class II (A) acear_RS02260 PF06135 IreB regulatory phosphoprotein acear_RS02270 PF03652 Holliday junction resolvase acear_RS02275 PF06949 Protein of unknown function (DUF1292) acear_RS02285 PF02618 YceG-like family acear_RS02290 PF01596 O-methyltransferase acear_RS02295 PF16325 Peptidase family U32 C-terminal domain acear_RS02295 PF01136 Peptidase family U32 acear_RS02325 PF04542 Sigma-70 region 2 acear_RS02325 PF04545 Sigma-70, region 4 acear_RS02345 PF01471 Putative peptidoglycan binding domain acear_RS02345 PF07486 Cell Wall Hydrolase acear_RS02360 PF18277 AbrB C-terminal domain acear_RS02360 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin acear_RS02365 PF00005 ABC transporter acear_RS02365 PF00571 CBS domain acear_RS02370 PF00528 Binding-protein-dependent transport system inner membrane component acear_RS02375 PF04069 Substrate binding domain of ABC-type glycine betaine transport system acear_RS02380 PF04069 Substrate binding domain of ABC-type glycine betaine transport system acear_RS02385 PF00528 Binding-protein-dependent transport system inner membrane component acear_RS02390 PF02607 B12 binding domain acear_RS02390 PF02310 B12 binding domain acear_RS02400 PF00158 Sigma-54 interaction domain acear_RS02400 PF13426 PAS domain acear_RS02400 PF02954 Bacterial regulatory protein, Fis family acear_RS02405 PF06253 Trimethylamine methyltransferase (MTTB) acear_RS02410 PF02028 BCCT, betaine/carnitine/choline family transporter acear_RS02415 PF02607 B12 binding domain acear_RS02415 PF02310 B12 binding domain acear_RS02425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain acear_RS02425 PF00672 HAMP domain acear_RS02425 PF02743 Cache domain acear_RS02445 PF00939 Sodium:sulfate symporter transmembrane region acear_RS02450 PF00871 Acetokinase family acear_RS02455 PF01515 Phosphate acetyl/butaryl transferase acear_RS02465 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg acear_RS02465 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase acear_RS02465 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II acear_RS02470 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain acear_RS02480 PF00111 2Fe-2S iron-sulfur cluster binding domain acear_RS02480 PF01799 [2Fe-2S] binding domain acear_RS02485 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain acear_RS02485 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase acear_RS02490 PF00941 FAD binding domain in molybdopterin dehydrogenase acear_RS02495 PF01180 Dihydroorotate dehydrogenase acear_RS02505 PF00795 Carbon-nitrogen hydrolase acear_RS02515 PF03594 Benzoate membrane transport protein acear_RS02520 PF08402 TOBE domain acear_RS02520 PF00005 ABC transporter acear_RS02525 PF02464 Competence-damaged protein acear_RS02525 PF00994 Probable molybdopterin binding domain acear_RS02530 PF13478 XdhC Rossmann domain acear_RS02530 PF02625 XdhC and CoxI family acear_RS02545 PF00528 Binding-protein-dependent transport system inner membrane component acear_RS02560 PF02625 XdhC and CoxI family acear_RS02560 PF13478 XdhC Rossmann domain acear_RS02570 PF00132 Bacterial transferase hexapeptide (six repeats) acear_RS02570 PF12804 MobA-like NTP transferase domain acear_RS02580 PF02310 B12 binding domain acear_RS02585 PF13941 MutL protein acear_RS02590 PF06368 Methylaspartate mutase E chain (MutE) acear_RS02595 PF07476 Methylaspartate ammonia-lyase C-terminus acear_RS02595 PF05034 Methylaspartate ammonia-lyase N-terminus acear_RS02610 PF00989 PAS fold acear_RS02610 PF00158 Sigma-54 interaction domain acear_RS02610 PF02954 Bacterial regulatory protein, Fis family acear_RS02625 PF03553 Na+/H+ antiporter family acear_RS02630 PF03746 LamB/YcsF family acear_RS02635 PF01566 Natural resistance-associated macrophage protein acear_RS02645 PF07286 Protein of unknown function (DUF1445) acear_RS02650 PF02682 Carboxyltransferase domain, subdomain C and D acear_RS02655 PF02626 Carboxyltransferase domain, subdomain A and B acear_RS02670 PF03725 3' exoribonuclease family, domain 2 acear_RS02670 PF01138 3' exoribonuclease family, domain 1 acear_RS02675 PF01725 Ham1 family acear_RS02715 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase acear_RS02715 PF05698 Bacterial trigger factor protein (TF) C-terminus acear_RS02715 PF05697 Bacterial trigger factor protein (TF) acear_RS02720 PF00574 Clp protease acear_RS02725 PF07724 AAA domain (Cdc48 subfamily) acear_RS02725 PF10431 C-terminal, D2-small domain, of ClpB protein acear_RS02725 PF06689 ClpX C4-type zinc finger acear_RS02730 PF05362 Lon protease (S16) C-terminal proteolytic domain acear_RS02730 PF00004 ATPase family associated with various cellular activities (AAA) acear_RS02735 PF05362 Lon protease (S16) C-terminal proteolytic domain acear_RS02735 PF00004 ATPase family associated with various cellular activities (AAA) acear_RS02735 PF02190 ATP-dependent protease La (LON) substrate-binding domain acear_RS02740 PF01926 50S ribosome-binding GTPase acear_RS02750 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase acear_RS02755 PF01040 UbiA prenyltransferase family acear_RS02760 PF04055 Radical SAM superfamily acear_RS02765 PF02621 Menaquinone biosynthesis acear_RS02770 PF04055 Radical SAM superfamily acear_RS02775 PF01979 Amidohydrolase family acear_RS02780 PF02441 Flavoprotein acear_RS02785 PF00133 tRNA synthetases class I (I, L, M and V) acear_RS02785 PF08264 Anticodon-binding domain of tRNA acear_RS02785 PF10458 Valyl tRNA synthetase tRNA binding arm acear_RS02790 PF02954 Bacterial regulatory protein, Fis family acear_RS02790 PF00158 Sigma-54 interaction domain acear_RS02790 PF13426 PAS domain acear_RS02800 PF03553 Na+/H+ antiporter family acear_RS02805 PF00710 Asparaginase, N-terminal acear_RS02805 PF17763 Glutaminase/Asparaginase C-terminal domain acear_RS02810 PF00390 Malic enzyme, N-terminal domain acear_RS02810 PF03949 Malic enzyme, NAD binding domain acear_RS02815 PF10415 Fumarase C C-terminus acear_RS02815 PF00206 Lyase acear_RS02820 PF01177 Asp/Glu/Hydantoin racemase acear_RS02835 PF00285 Citrate synthase, C-terminal domain acear_RS02840 PF07669 Eco57I restriction-modification methylase acear_RS02860 PF05860 haemagglutination activity domain acear_RS02860 PF13332 Hemagglutinin repeat acear_RS02860 PF02661 Fic/DOC family acear_RS02860 PF13018 Extended Signal Peptide of Type V secretion system acear_RS02860 PF03543 Yersinia/Haemophilus virulence surface antigen acear_RS02865 PF08245 Mur ligase middle domain acear_RS02865 PF02875 Mur ligase family, glutamate ligase domain acear_RS02880 PF00571 CBS domain acear_RS02880 PF00478 IMP dehydrogenase / GMP reductase domain acear_RS02890 PF10531 SLBB domain acear_RS02890 PF13375 RnfC Barrel sandwich hybrid domain acear_RS02890 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit acear_RS02890 PF13237 4Fe-4S dicluster domain acear_RS02895 PF03116 NQR2, RnfD, RnfE family acear_RS02900 PF04205 FMN-binding domain acear_RS02905 PF02508 Rnf-Nqr subunit, membrane protein acear_RS02910 PF02508 Rnf-Nqr subunit, membrane protein acear_RS02915 PF13187 4Fe-4S dicluster domain acear_RS02915 PF04060 Putative Fe-S cluster acear_RS02915 PF00037 4Fe-4S binding domain acear_RS02920 PF01209 ubiE/COQ5 methyltransferase family acear_RS02925 PF00348 Polyprenyl synthetase acear_RS02930 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain acear_RS02930 PF01488 Shikimate / quinate 5-dehydrogenase acear_RS02930 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain acear_RS02935 PF10414 Sirohaem synthase dimerisation region acear_RS02935 PF14824 Sirohaem biosynthesis protein central acear_RS02935 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases acear_RS02940 PF03900 Porphobilinogen deaminase, C-terminal domain acear_RS02940 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain acear_RS02945 PF02602 Uroporphyrinogen-III synthase HemD acear_RS02945 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases acear_RS02950 PF00490 Delta-aminolevulinic acid dehydratase acear_RS02955 PF17805 AsnC-like ligand binding domain acear_RS02955 PF13404 AsnC-type helix-turn-helix domain acear_RS02960 PF17805 AsnC-like ligand binding domain acear_RS02965 PF00202 Aminotransferase class-III acear_RS02970 PF02424 ApbE family acear_RS02975 PF12804 MobA-like NTP transferase domain acear_RS02985 PF03205 Molybdopterin guanine dinucleotide synthesis protein B acear_RS02995 PF02545 Maf-like protein acear_RS03000 PF04002 RadC-like JAB domain acear_RS03020 PF00905 Penicillin binding protein transpeptidase domain acear_RS03020 PF03717 Penicillin-binding Protein dimerisation domain acear_RS03030 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain acear_RS03035 PF03776 Septum formation topological specificity factor MinE acear_RS03040 PF01098 Cell cycle protein acear_RS03060 PF10150 Ribonuclease E/G family acear_RS03060 PF00575 S1 RNA binding domain acear_RS03065 PF00829 Ribosomal prokaryotic L21 protein acear_RS03075 PF01016 Ribosomal L27 protein acear_RS03080 PF01926 50S ribosome-binding GTPase acear_RS03080 PF09269 Domain of unknown function (DUF1967) acear_RS03080 PF01018 GTP1/OBG acear_RS03085 PF01985 CRS1 / YhbY (CRM) domain acear_RS03090 PF01472 PUA domain acear_RS03090 PF00696 Amino acid kinase family acear_RS03095 PF00171 Aldehyde dehydrogenase family acear_RS03110 PF01467 Cytidylyltransferase-like acear_RS03115 PF01966 HD domain acear_RS03120 PF03816 Cell envelope-related transcriptional attenuator domain acear_RS03135 PF08264 Anticodon-binding domain of tRNA acear_RS03135 PF00133 tRNA synthetases class I (I, L, M and V) acear_RS03135 PF13603 Leucyl-tRNA synthetase, Domain 2 acear_RS03135 PF09334 tRNA synthetases class I (M) acear_RS03145 PF00753 Metallo-beta-lactamase superfamily acear_RS03145 PF03772 Competence protein acear_RS03150 PF02899 Phage integrase, N-terminal SAM-like domain acear_RS03150 PF00589 Phage integrase family acear_RS03155 PF00512 His Kinase A (phospho-acceptor) domain acear_RS03155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase acear_RS03155 PF00672 HAMP domain acear_RS03195 PF00269 Small, acid-soluble spore proteins, alpha/beta type acear_RS03200 PF00269 Small, acid-soluble spore proteins, alpha/beta type acear_RS03210 PF01649 Ribosomal protein S20 acear_RS03220 PF03418 Germination protease acear_RS03230 PF03144 Elongation factor Tu domain 2 acear_RS03230 PF06421 GTP-binding protein LepA C-terminus acear_RS03230 PF00679 Elongation factor G C-terminus acear_RS03230 PF00009 Elongation factor Tu GTP binding domain acear_RS03235 PF04055 Radical SAM superfamily acear_RS03235 PF06969 HemN C-terminal domain acear_RS03240 PF01628 HrcA protein C terminal domain acear_RS03245 PF01025 GrpE acear_RS03250 PF00012 Hsp70 protein acear_RS03255 PF00226 DnaJ domain acear_RS03255 PF01556 DnaJ C terminal domain acear_RS03255 PF00684 DnaJ central domain acear_RS03265 PF04452 RNA methyltransferase acear_RS03270 PF04055 Radical SAM superfamily acear_RS03270 PF01938 TRAM domain acear_RS03270 PF00919 Uncharacterized protein family UPF0004 acear_RS03275 PF01230 HIT domain acear_RS03280 PF09424 Yqey-like protein acear_RS03285 PF01972 Serine dehydrogenase proteinase acear_RS03285 PF01957 NfeD-like C-terminal, partner-binding acear_RS03290 PF12127 SigmaW regulon antibacterial acear_RS03300 PF01740 STAS domain acear_RS03300 PF00916 Sulfate permease family acear_RS03305 PF07873 YabP family acear_RS03315 PF02562 PhoH-like protein acear_RS03320 PF07698 7TM receptor with intracellular HD hydrolase acear_RS03320 PF01966 HD domain acear_RS03320 PF07697 7TM-HD extracellular acear_RS03325 PF02130 Uncharacterized protein family UPF0054 acear_RS03330 PF00571 CBS domain acear_RS03330 PF01595 Cyclin M transmembrane N-terminal domain acear_RS03330 PF03471 Transporter associated domain acear_RS03340 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region acear_RS03350 PF07650 KH domain acear_RS03350 PF01926 50S ribosome-binding GTPase acear_RS03355 PF03448 MgtE intracellular N domain acear_RS03355 PF01769 Divalent cation transporter acear_RS03355 PF00571 CBS domain acear_RS03360 PF01791 DeoC/LacD family aldolase acear_RS03365 PF00266 Aminotransferase class-V acear_RS03370 PF00528 Binding-protein-dependent transport system inner membrane component acear_RS03375 PF00528 Binding-protein-dependent transport system inner membrane component acear_RS03375 PF12911 N-terminal TM domain of oligopeptide transport permease C acear_RS03380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region acear_RS03380 PF00005 ABC transporter acear_RS03385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region acear_RS03385 PF00005 ABC transporter acear_RS03390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle acear_RS03400 PF04879 Molybdopterin oxidoreductase Fe4S4 domain acear_RS03400 PF01568 Molydopterin dinucleotide binding domain acear_RS03400 PF00384 Molybdopterin oxidoreductase acear_RS03405 PF00205 Thiamine pyrophosphate enzyme, central domain acear_RS03405 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain acear_RS03405 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain acear_RS03410 PF10369 Small subunit of acetolactate synthase acear_RS03420 PF03099 Biotin/lipoate A/B protein ligase family acear_RS03420 PF10437 Bacterial lipoate protein ligase C-terminus acear_RS03425 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain acear_RS03425 PF07992 Pyridine nucleotide-disulphide oxidoreductase acear_RS03455 PF00270 DEAD/DEAH box helicase acear_RS03455 PF00271 Helicase conserved C-terminal domain acear_RS03475 PF00183 Hsp90 protein acear_RS03480 PF01609 Transposase DDE domain acear_RS03485 PF01381 Helix-turn-helix acear_RS03510 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal acear_RS03510 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit acear_RS03515 PF00374 Nickel-dependent hydrogenase acear_RS03520 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA acear_RS03525 PF02492 CobW/HypB/UreG, nucleotide-binding domain acear_RS03530 PF17788 HypF Kae1-like domain acear_RS03530 PF01300 Telomere recombination acear_RS03530 PF07503 HypF finger acear_RS03530 PF00708 Acylphosphatase acear_RS03535 PF01455 HupF/HypC family acear_RS03540 PF01924 Hydrogenase formation hypA family acear_RS03545 PF02769 AIR synthase related protein, C-terminal domain acear_RS03545 PF00586 AIR synthase related protein, N-terminal domain acear_RS03560 PF00005 ABC transporter acear_RS03560 PF00664 ABC transporter transmembrane region acear_RS03565 PF00664 ABC transporter transmembrane region acear_RS03565 PF00005 ABC transporter acear_RS03580 PF01022 Bacterial regulatory protein, arsR family acear_RS03590 PF00551 Formyl transferase acear_RS03590 PF01370 NAD dependent epimerase/dehydratase family acear_RS03590 PF02911 Formyl transferase, C-terminal domain acear_RS03610 PF02565 Recombination protein O C terminal acear_RS03610 PF11967 Recombination protein O N terminal acear_RS03620 PF02091 Glycyl-tRNA synthetase alpha subunit acear_RS03625 PF02092 Glycyl-tRNA synthetase beta subunit acear_RS03625 PF05746 DALR anticodon binding domain acear_RS03630 PF03618 Kinase/pyrophosphorylase acear_RS03635 PF00571 CBS domain acear_RS03635 PF08279 HTH domain acear_RS03640 PF03618 Kinase/pyrophosphorylase acear_RS03645 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded acear_RS03650 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain acear_RS03650 PF00391 PEP-utilising enzyme, mobile domain acear_RS03650 PF02896 PEP-utilising enzyme, TIM barrel domain acear_RS03655 PF03358 NADPH-dependent FMN reductase acear_RS03660 PF01966 HD domain acear_RS03660 PF13286 Phosphohydrolase-associated domain acear_RS03665 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 acear_RS03670 PF10410 DnaB-helicase binding domain of primase acear_RS03670 PF08275 DNA primase catalytic core, N-terminal domain acear_RS03670 PF01807 CHC2 zinc finger acear_RS03675 PF04545 Sigma-70, region 4 acear_RS03675 PF04542 Sigma-70 region 2 acear_RS03675 PF00140 Sigma-70 factor, region 1.2 acear_RS03675 PF04539 Sigma-70 region 3 acear_RS03675 PF03979 Sigma-70 factor, region 1.1 acear_RS03690 PF04816 tRNA (adenine(22)-N(1))-methyltransferase acear_RS03695 PF01784 NIF3 (NGG1p interacting factor 3) acear_RS03715 PF00800 Prephenate dehydratase acear_RS03715 PF01817 Chorismate mutase type II acear_RS03715 PF01842 ACT domain acear_RS03720 PF01709 Transcriptional regulator acear_RS03730 PF01330 RuvA N terminal domain acear_RS03730 PF07499 RuvA, C-terminal domain acear_RS03735 PF05496 Holliday junction DNA helicase RuvB P-loop domain acear_RS03735 PF05491 RuvB C-terminal winged helix domain acear_RS03735 PF17864 RuvB AAA lid domain acear_RS03740 PF11146 Protein of unknown function (DUF2905) acear_RS03745 PF02547 Queuosine biosynthesis protein acear_RS03750 PF01702 Queuine tRNA-ribosyltransferase acear_RS03755 PF02699 Preprotein translocase subunit acear_RS03760 PF10502 Signal peptidase, peptidase S26 acear_RS03770 PF02355 Protein export membrane protein acear_RS03770 PF07549 SecD/SecF GG Motif acear_RS03775 PF07549 SecD/SecF GG Motif acear_RS03775 PF02355 Protein export membrane protein acear_RS03790 PF03109 ABC1 family acear_RS03800 PF10141 Single-strand DNA-specific exonuclease, C terminal domain acear_RS03800 PF17768 RecJ OB domain acear_RS03800 PF02272 DHHA1 domain acear_RS03800 PF01368 DHH family acear_RS03805 PF00156 Phosphoribosyl transferase domain acear_RS03810 PF13291 ACT domain acear_RS03810 PF04607 Region found in RelA / SpoT proteins acear_RS03810 PF02824 TGS domain acear_RS03815 PF02580 D-Tyr-tRNA(Tyr) deacylase acear_RS03820 PF00753 Metallo-beta-lactamase superfamily acear_RS03830 PF03129 Anticodon binding domain acear_RS03830 PF13393 Histidyl-tRNA synthetase acear_RS03835 PF02938 GAD domain acear_RS03835 PF01336 OB-fold nucleic acid binding domain acear_RS03835 PF00152 tRNA synthetases class II (D, K and N) acear_RS03840 PF01812 5-formyltetrahydrofolate cyclo-ligase family acear_RS03845 PF16193 AAA C-terminal domain acear_RS03845 PF12002 MgsA AAA+ ATPase C terminal acear_RS03845 PF05496 Holliday junction DNA helicase RuvB P-loop domain acear_RS03850 PF01205 Uncharacterized protein family UPF0029 acear_RS03850 PF09186 Domain of unknown function (DUF1949) acear_RS03860 PF02082 Transcriptional regulator acear_RS03865 PF00266 Aminotransferase class-V acear_RS03870 PF04324 BFD-like [2Fe-2S] binding domain acear_RS03870 PF01106 NifU-like domain acear_RS03870 PF01592 NifU-like N terminal domain acear_RS03965 PF03956 Lysine exporter LysO acear_RS03970 PF01795 MraW methylase family acear_RS03980 PF00905 Penicillin binding protein transpeptidase domain acear_RS03980 PF03717 Penicillin-binding Protein dimerisation domain acear_RS03980 PF03793 PASTA domain acear_RS03985 PF01225 Mur ligase family, catalytic domain acear_RS03985 PF02875 Mur ligase family, glutamate ligase domain acear_RS03985 PF08245 Mur ligase middle domain acear_RS03990 PF02875 Mur ligase family, glutamate ligase domain acear_RS03990 PF01225 Mur ligase family, catalytic domain acear_RS03990 PF08245 Mur ligase middle domain acear_RS03995 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 acear_RS03995 PF00953 Glycosyl transferase family 4 acear_RS04000 PF02875 Mur ligase family, glutamate ligase domain acear_RS04000 PF08245 Mur ligase middle domain acear_RS04005 PF01098 Cell cycle protein acear_RS04010 PF04101 Glycosyltransferase family 28 C-terminal domain acear_RS04010 PF03033 Glycosyltransferase family 28 N-terminal domain acear_RS04015 PF08245 Mur ligase middle domain acear_RS04015 PF02875 Mur ligase family, glutamate ligase domain acear_RS04015 PF01225 Mur ligase family, catalytic domain acear_RS04020 PF01565 FAD binding domain acear_RS04020 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain acear_RS04025 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) acear_RS04030 PF07478 D-ala D-ala ligase C-terminus acear_RS04030 PF01820 D-ala D-ala ligase N-terminus acear_RS04040 PF02491 SHS2 domain inserted in FTSA acear_RS04045 PF12327 FtsZ family, C-terminal domain acear_RS04045 PF00091 Tubulin/FtsZ family, GTPase domain acear_RS04050 PF03419 Sporulation factor SpoIIGA acear_RS04055 PF04542 Sigma-70 region 2 acear_RS04055 PF04545 Sigma-70, region 4 acear_RS04065 PF01964 Radical SAM ThiC family acear_RS04070 PF01964 Radical SAM ThiC family acear_RS04075 PF02277 Phosphoribosyltransferase acear_RS04105 PF01891 Cobalt uptake substrate-specific transmembrane region acear_RS04110 PF02553 Cobalt transport protein component CbiN acear_RS04115 PF01497 Periplasmic binding protein acear_RS04120 PF01032 FecCD transport family acear_RS04125 PF00005 ABC transporter acear_RS04130 PF00593 TonB dependent receptor acear_RS04130 PF07715 TonB-dependent Receptor Plug Domain acear_RS04140 PF01618 MotA/TolQ/ExbB proton channel family acear_RS04145 PF02472 Biopolymer transport protein ExbD/TolR acear_RS04150 PF01903 CbiX acear_RS04160 PF01891 Cobalt uptake substrate-specific transmembrane region acear_RS04170 PF02361 Cobalt transport protein acear_RS04175 PF00005 ABC transporter acear_RS04180 PF01497 Periplasmic binding protein acear_RS04185 PF01032 FecCD transport family acear_RS04190 PF00005 ABC transporter acear_RS04195 PF01980 tRNA-methyltransferase O acear_RS04230 PF01891 Cobalt uptake substrate-specific transmembrane region acear_RS04250 PF00005 ABC transporter acear_RS04260 PF00474 Sodium:solute symporter family acear_RS04265 PF01546 Peptidase family M20/M25/M40 acear_RS04265 PF07687 Peptidase dimerisation domain acear_RS04270 PF02595 Glycerate kinase family acear_RS04320 PF00465 Iron-containing alcohol dehydrogenase acear_RS04350 PF00589 Phage integrase family acear_RS04385 PF01867 CRISPR associated protein Cas1 acear_RS04385 PF01930 Domain of unknown function DUF83 acear_RS04390 PF09827 CRISPR associated protein Cas2 acear_RS04405 PF08000 Bacterial PH domain acear_RS04425 PF02446 4-alpha-glucanotransferase acear_RS04430 PF02570 Precorrin-8X methylmutase acear_RS04435 PF01888 CbiD acear_RS04445 PF05175 Methyltransferase small domain acear_RS04450 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases acear_RS04455 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases acear_RS04460 PF11761 Cobalamin biosynthesis central region acear_RS04460 PF01890 Cobalamin synthesis G C-terminus acear_RS04460 PF11760 Cobalamin synthesis G N-terminal acear_RS04465 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases acear_RS04465 PF01077 Nitrite and sulphite reductase 4Fe-4S domain acear_RS04470 PF02571 Precorrin-6x reductase CbiJ/CobK acear_RS04475 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase acear_RS04480 PF07685 CobB/CobQ-like glutamine amidotransferase domain acear_RS04480 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain acear_RS04485 PF07685 CobB/CobQ-like glutamine amidotransferase domain acear_RS04490 PF03186 CobD/Cbib protein acear_RS04495 PF07685 CobB/CobQ-like glutamine amidotransferase domain acear_RS04495 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain acear_RS04500 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP acear_RS04505 PF02654 Cobalamin-5-phosphate synthase acear_RS04510 PF00288 GHMP kinases N terminal domain acear_RS04515 PF00155 Aminotransferase class I and II acear_RS04520 PF00300 Histidine phosphatase superfamily (branch 1) acear_RS04525 PF04539 Sigma-70 region 3 acear_RS04525 PF04542 Sigma-70 region 2 acear_RS04525 PF04545 Sigma-70, region 4 acear_RS04530 PF09551 Stage II sporulation protein R (spore_II_R) acear_RS04535 PF05239 PRC-barrel domain acear_RS04540 PF08753 NikR C terminal nickel binding domain acear_RS04540 PF01402 Ribbon-helix-helix protein, copG family acear_RS04545 PF02578 Multi-copper polyphenol oxidoreductase laccase acear_RS04550 PF00072 Response regulator receiver domain acear_RS04550 PF00486 Transcriptional regulatory protein, C terminal acear_RS04555 PF18698 Histidine kinase sensor domain acear_RS04555 PF00512 His Kinase A (phospho-acceptor) domain acear_RS04555 PF00672 HAMP domain acear_RS04555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase acear_RS04555 PF00989 PAS fold acear_RS04565 PF12849 PBP superfamily domain acear_RS04570 PF00563 EAL domain acear_RS04575 PF00486 Transcriptional regulatory protein, C terminal acear_RS04575 PF00072 Response regulator receiver domain acear_RS04580 PF12849 PBP superfamily domain acear_RS04585 PF00528 Binding-protein-dependent transport system inner membrane component acear_RS04590 PF00528 Binding-protein-dependent transport system inner membrane component acear_RS04595 PF00005 ABC transporter acear_RS04600 PF01895 PhoU domain acear_RS04610 PF02562 PhoH-like protein acear_RS04610 PF13638 PIN domain acear_RS04615 PF13426 PAS domain acear_RS04615 PF13188 PAS domain acear_RS04615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase acear_RS04615 PF00512 His Kinase A (phospho-acceptor) domain acear_RS04615 PF00989 PAS fold acear_RS04620 PF00990 Diguanylate cyclase, GGDEF domain acear_RS04620 PF00072 Response regulator receiver domain acear_RS04625 PF01966 HD domain acear_RS04625 PF00072 Response regulator receiver domain acear_RS04635 PF00990 Diguanylate cyclase, GGDEF domain acear_RS04635 PF08448 PAS fold acear_RS04640 PF03063 Prismane/CO dehydrogenase family acear_RS04650 PF01168 Alanine racemase, N-terminal domain acear_RS04655 PF03807 NADP oxidoreductase coenzyme F420-dependent acear_RS04655 PF14748 Pyrroline-5-carboxylate reductase dimerisation acear_RS04660 PF02325 YGGT family acear_RS04665 PF01479 S4 domain acear_RS04665 PF17774 Putative RNA-binding domain in YlmH acear_RS04680 PF01048 Phosphorylase superfamily acear_RS04685 PF00133 tRNA synthetases class I (I, L, M and V) acear_RS04685 PF06827 Zinc finger found in FPG and IleRS acear_RS04685 PF08264 Anticodon-binding domain of tRNA acear_RS04690 PF01206 Sulfurtransferase TusA acear_RS04700 PF00266 Aminotransferase class-V acear_RS04715 PF01252 Signal peptidase (SPase) II acear_RS04720 PF01479 S4 domain acear_RS04720 PF00849 RNA pseudouridylate synthase acear_RS04730 PF00156 Phosphoribosyl transferase domain acear_RS04735 PF00860 Permease family acear_RS04740 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain acear_RS04740 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain acear_RS04745 PF01979 Amidohydrolase family acear_RS04750 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family acear_RS04755 PF00117 Glutamine amidotransferase class-I acear_RS04755 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain acear_RS04760 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain acear_RS04760 PF02142 MGS-like domain acear_RS04760 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain acear_RS04765 PF00175 Oxidoreductase NAD-binding domain acear_RS04765 PF00970 Oxidoreductase FAD-binding domain acear_RS04765 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B acear_RS04770 PF01180 Dihydroorotate dehydrogenase acear_RS04775 PF00156 Phosphoribosyl transferase domain acear_RS04785 PF00589 Phage integrase family acear_RS04785 PF02899 Phage integrase, N-terminal SAM-like domain acear_RS04800 PF01555 DNA methylase acear_RS04825 PF07883 Cupin domain acear_RS04830 PF03781 Sulfatase-modifying factor enzyme 1 acear_RS04850 PF09962 Uncharacterized conserved protein (DUF2196) acear_RS04855 PF01430 Hsp33 protein acear_RS04870 PF18277 AbrB C-terminal domain acear_RS04870 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin acear_RS04880 PF00158 Sigma-54 interaction domain acear_RS04880 PF13426 PAS domain acear_RS04880 PF02954 Bacterial regulatory protein, Fis family acear_RS04885 PF02548 Ketopantoate hydroxymethyltransferase acear_RS04890 PF02558 Ketopantoate reductase PanE/ApbA acear_RS04890 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain acear_RS04905 PF02028 BCCT, betaine/carnitine/choline family transporter acear_RS04910 PF06253 Trimethylamine methyltransferase (MTTB) acear_RS04915 PF02310 B12 binding domain acear_RS04915 PF02607 B12 binding domain acear_RS04930 PF02743 Cache domain acear_RS04930 PF00672 HAMP domain acear_RS04930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain acear_RS04950 PF00269 Small, acid-soluble spore proteins, alpha/beta type acear_RS04955 PF01966 HD domain acear_RS04960 PF00356 Bacterial regulatory proteins, lacI family acear_RS04985 PF03328 HpcH/HpaI aldolase/citrate lyase family acear_RS04990 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain acear_RS04990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain acear_RS04990 PF01842 ACT domain acear_RS05005 PF02633 Creatinine amidohydrolase acear_RS05010 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 acear_RS05010 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain acear_RS05025 PF08240 Alcohol dehydrogenase GroES-like domain acear_RS05025 PF00107 Zinc-binding dehydrogenase acear_RS05030 PF02607 B12 binding domain acear_RS05030 PF02310 B12 binding domain acear_RS05040 PF00390 Malic enzyme, N-terminal domain acear_RS05040 PF03949 Malic enzyme, NAD binding domain acear_RS05055 PF05670 NFACT protein RNA binding domain acear_RS05060 PF00690 Cation transporter/ATPase, N-terminus acear_RS05060 PF00689 Cation transporting ATPase, C-terminus acear_RS05065 PF01584 CheW-like domain acear_RS05070 PF07194 P2 response regulator binding domain acear_RS05070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase acear_RS05070 PF01627 Hpt domain acear_RS05070 PF01584 CheW-like domain acear_RS05070 PF02895 Signal transducing histidine kinase, homodimeric domain acear_RS05075 PF00072 Response regulator receiver domain acear_RS05080 PF01339 CheB methylesterase acear_RS05080 PF00072 Response regulator receiver domain acear_RS05085 PF03989 DNA gyrase C-terminal domain, beta-propeller acear_RS05085 PF00521 DNA gyrase/topoisomerase IV, subunit A acear_RS05100 PF04239 Protein of unknown function (DUF421) acear_RS05110 PF00986 DNA gyrase B subunit, carboxyl terminus acear_RS05110 PF01751 Toprim domain acear_RS05110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase acear_RS05110 PF00204 DNA gyrase B acear_RS05120 PF13683 Integrase core domain acear_RS05120 PF13276 HTH-like domain acear_RS05145 PF12800 4Fe-4S binding domain acear_RS05145 PF13247 4Fe-4S dicluster domain acear_RS05150 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain acear_RS05150 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 acear_RS05160 PF02954 Bacterial regulatory protein, Fis family acear_RS05160 PF00158 Sigma-54 interaction domain acear_RS05160 PF13426 PAS domain acear_RS05165 PF00465 Iron-containing alcohol dehydrogenase acear_RS05175 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region acear_RS05175 PF00037 4Fe-4S binding domain acear_RS05175 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit acear_RS05180 PF03063 Prismane/CO dehydrogenase family acear_RS05185 PF13247 4Fe-4S dicluster domain acear_RS05185 PF12800 4Fe-4S binding domain acear_RS05190 PF13237 4Fe-4S dicluster domain acear_RS05190 PF04879 Molybdopterin oxidoreductase Fe4S4 domain acear_RS05190 PF00384 Molybdopterin oxidoreductase acear_RS05190 PF01568 Molydopterin dinucleotide binding domain acear_RS05190 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region acear_RS05195 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain acear_RS05205 PF09338 Glycine/sarcosine/betaine reductase component B subunits acear_RS05210 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) acear_RS05215 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) acear_RS05225 PF01177 Asp/Glu/Hydantoin racemase acear_RS05235 PF00210 Ferritin-like domain acear_RS05240 PF06397 Desulfoferrodoxin, N-terminal domain acear_RS05240 PF01880 Desulfoferrodoxin acear_RS05245 PF02915 Rubrerythrin acear_RS05255 PF00072 Response regulator receiver domain acear_RS05255 PF01966 HD domain acear_RS05260 PF01734 Patatin-like phospholipase acear_RS05265 PF13180 PDZ domain acear_RS05265 PF05362 Lon protease (S16) C-terminal proteolytic domain acear_RS05270 PF05636 HIGH Nucleotidyl Transferase acear_RS05275 PF01515 Phosphate acetyl/butaryl transferase acear_RS05280 PF00871 Acetokinase family acear_RS05295 PF01554 MatE acear_RS05300 PF01515 Phosphate acetyl/butaryl transferase acear_RS05305 PF00871 Acetokinase family acear_RS05315 PF01783 Ribosomal L32p protein family acear_RS05320 PF03061 Thioesterase superfamily acear_RS05325 PF02504 Fatty acid synthesis protein acear_RS05330 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III acear_RS05330 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal acear_RS05335 PF03060 Nitronate monooxygenase acear_RS05340 PF00698 Acyl transferase domain acear_RS05350 PF00550 Phosphopantetheine attachment site acear_RS05355 PF03060 Nitronate monooxygenase acear_RS05360 PF00109 Beta-ketoacyl synthase, N-terminal domain acear_RS05360 PF02801 Beta-ketoacyl synthase, C-terminal domain acear_RS05365 PF00035 Double-stranded RNA binding motif acear_RS05365 PF14622 Ribonuclease-III-like acear_RS05400 PF07736 Chorismate mutase type I acear_RS05405 PF00155 Aminotransferase class I and II acear_RS05410 PF18152 DAHP synthase ferredoxin-like domain acear_RS05410 PF00793 DAHP synthetase I family acear_RS05415 PF02153 Prephenate dehydrogenase acear_RS05420 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) acear_RS05425 PF02224 Cytidylate kinase acear_RS05430 PF01553 Acyltransferase acear_RS05435 PF06580 Histidine kinase acear_RS05435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase acear_RS05435 PF13492 GAF domain acear_RS05435 PF07694 5TMR of 5TMR-LYT acear_RS05440 PF04397 LytTr DNA-binding domain acear_RS05440 PF00072 Response regulator receiver domain acear_RS05445 PF02554 Carbon starvation protein CstA acear_RS05450 PF02401 LytB protein acear_RS05450 PF00575 S1 RNA binding domain acear_RS05460 PF07454 Stage II sporulation protein P (SpoIIP) acear_RS05465 PF14045 YIEGIA protein acear_RS05490 PF01926 50S ribosome-binding GTPase acear_RS05490 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal acear_RS05495 PF02660 Glycerol-3-phosphate acyltransferase acear_RS05500 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus acear_RS05500 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus acear_RS05505 PF17853 GGDEF-like domain acear_RS05505 PF05651 Putative sugar diacid recognition acear_RS05505 PF13556 PucR C-terminal helix-turn-helix domain acear_RS05510 PF06253 Trimethylamine methyltransferase (MTTB) acear_RS05515 PF02028 BCCT, betaine/carnitine/choline family transporter acear_RS05520 PF02310 B12 binding domain acear_RS05520 PF02607 B12 binding domain acear_RS05525 PF06253 Trimethylamine methyltransferase (MTTB) acear_RS05530 PF02607 B12 binding domain acear_RS05530 PF02310 B12 binding domain acear_RS05540 PF05378 Hydantoinase/oxoprolinase N-terminal region acear_RS05540 PF01968 Hydantoinase/oxoprolinase acear_RS05545 PF00809 Pterin binding enzyme acear_RS05545 PF02574 Homocysteine S-methyltransferase acear_RS05545 PF02607 B12 binding domain acear_RS05545 PF02965 Vitamin B12 dependent methionine synthase, activation domain acear_RS05545 PF02310 B12 binding domain acear_RS05555 PF09338 Glycine/sarcosine/betaine reductase component B subunits acear_RS05560 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) acear_RS05565 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) acear_RS05570 PF04723 Glycine reductase complex selenoprotein A acear_RS05575 PF04723 Glycine reductase complex selenoprotein A acear_RS05580 PF07992 Pyridine nucleotide-disulphide oxidoreductase acear_RS05585 PF00085 Thioredoxin acear_RS05590 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III acear_RS05595 PF02504 Fatty acid synthesis protein acear_RS05600 PF09547 Stage IV sporulation protein A (spore_IV_A) acear_RS05605 PF00216 Bacterial DNA-binding protein acear_RS05610 PF01063 Amino-transferase class IV acear_RS05620 PF01842 ACT domain acear_RS05620 PF03447 Homoserine dehydrogenase, NAD binding domain acear_RS05620 PF00742 Homoserine dehydrogenase acear_RS05625 PF00696 Amino acid kinase family acear_RS05625 PF13840 ACT domain acear_RS05630 PF08544 GHMP kinases C terminal acear_RS05630 PF00288 GHMP kinases N terminal domain acear_RS05635 PF02574 Homocysteine S-methyltransferase acear_RS05635 PF02219 Methylenetetrahydrofolate reductase acear_RS05640 PF08245 Mur ligase middle domain acear_RS05640 PF02875 Mur ligase family, glutamate ligase domain acear_RS05640 PF01225 Mur ligase family, catalytic domain acear_RS05650 PF04239 Protein of unknown function (DUF421) acear_RS05660 PF02245 Methylpurine-DNA glycosylase (MPG) acear_RS05665 PF08279 HTH domain acear_RS05665 PF02829 3H domain acear_RS05670 PF02445 Quinolinate synthetase A protein acear_RS05675 PF00890 FAD binding domain acear_RS05675 PF02910 Fumarate reductase flavoprotein C-term acear_RS05680 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain acear_RS05680 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain acear_RS05690 PF00343 Carbohydrate phosphorylase acear_RS05690 PF11897 Protein of unknown function (DUF3417) acear_RS05700 PF09210 Domain of unknown function (DUF1957) acear_RS05700 PF03065 Glycosyl hydrolase family 57 acear_RS05705 PF00132 Bacterial transferase hexapeptide (six repeats) acear_RS05705 PF00483 Nucleotidyl transferase acear_RS05710 PF00534 Glycosyl transferases group 1 acear_RS05710 PF08323 Starch synthase catalytic domain acear_RS05720 PF01899 Na+/H+ ion antiporter subunit acear_RS05730 PF03334 Na+/H+ antiporter subunit acear_RS05745 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L acear_RS05750 PF00361 Proton-conducting membrane transporter acear_RS05755 PF00361 Proton-conducting membrane transporter acear_RS05760 PF00361 Proton-conducting membrane transporter acear_RS05775 PF03553 Na+/H+ antiporter family acear_RS05780 PF00291 Pyridoxal-phosphate dependent enzyme acear_RS05780 PF14821 Threonine synthase N terminus acear_RS05785 PF11897 Protein of unknown function (DUF3417) acear_RS05785 PF00343 Carbohydrate phosphorylase acear_RS05790 PF00403 Heavy-metal-associated domain acear_RS05795 PF00313 'Cold-shock' DNA-binding domain acear_RS05800 PF13180 PDZ domain acear_RS05800 PF17820 PDZ domain acear_RS05805 PF04961 Formiminotransferase-cyclodeaminase acear_RS05810 PF01471 Putative peptidoglycan binding domain acear_RS05810 PF07486 Cell Wall Hydrolase acear_RS05820 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin acear_RS05820 PF15714 Stage V sporulation protein T C-terminal, transcription factor acear_RS05825 PF01022 Bacterial regulatory protein, arsR family acear_RS05835 PF00085 Thioredoxin acear_RS05840 PF03477 ATP cone domain acear_RS05840 PF00317 Ribonucleotide reductase, all-alpha domain acear_RS05840 PF02867 Ribonucleotide reductase, barrel domain acear_RS05845 PF07486 Cell Wall Hydrolase acear_RS05845 PF01471 Putative peptidoglycan binding domain acear_RS05855 PF01520 N-acetylmuramoyl-L-alanine amidase acear_RS05860 PF08281 Sigma-70, region 4 acear_RS05860 PF04542 Sigma-70 region 2 acear_RS05880 PF00534 Glycosyl transferases group 1 acear_RS05880 PF13439 Glycosyltransferase Family 4 acear_RS05890 PF01381 Helix-turn-helix acear_RS05890 PF07883 Cupin domain acear_RS05895 PF03591 AzlC protein acear_RS05975 PF03698 Uncharacterised protein family (UPF0180) acear_RS05985 PF01053 Cys/Met metabolism PLP-dependent enzyme acear_RS05990 PF00561 alpha/beta hydrolase fold acear_RS05995 PF00586 AIR synthase related protein, N-terminal domain acear_RS05995 PF02769 AIR synthase related protein, C-terminal domain acear_RS06015 PF03979 Sigma-70 factor, region 1.1 acear_RS06015 PF00140 Sigma-70 factor, region 1.2 acear_RS06015 PF04542 Sigma-70 region 2 acear_RS06015 PF04539 Sigma-70 region 3 acear_RS06015 PF04545 Sigma-70, region 4 acear_RS06025 PF04055 Radical SAM superfamily acear_RS06025 PF00919 Uncharacterized protein family UPF0004 acear_RS06025 PF01938 TRAM domain acear_RS06035 PF05190 MutS family domain IV acear_RS06035 PF00488 MutS domain V acear_RS06035 PF01624 MutS domain I acear_RS06035 PF05188 MutS domain II acear_RS06035 PF05192 MutS domain III acear_RS06040 PF08676 MutL C terminal dimerisation domain acear_RS06040 PF01119 DNA mismatch repair protein, C-terminal domain acear_RS06050 PF17866 AAA lid domain acear_RS06050 PF00004 ATPase family associated with various cellular activities (AAA) acear_RS06055 PF01926 50S ribosome-binding GTPase acear_RS06055 PF01018 GTP1/OBG acear_RS06055 PF09269 Domain of unknown function (DUF1967) acear_RS06070 PF17209 Hfq protein acear_RS06085 PF13276 HTH-like domain acear_RS06085 PF00665 Integrase core domain acear_RS06085 PF13333 Integrase core domain acear_RS06090 PF00817 impB/mucB/samB family acear_RS06090 PF11799 impB/mucB/samB family C-terminal domain acear_RS06090 PF11798 IMS family HHH motif acear_RS06100 PF01943 Polysaccharide biosynthesis protein acear_RS06100 PF14667 Polysaccharide biosynthesis C-terminal domain acear_RS06105 PF00589 Phage integrase family acear_RS06105 PF02899 Phage integrase, N-terminal SAM-like domain acear_RS06110 PF00589 Phage integrase family acear_RS06110 PF02899 Phage integrase, N-terminal SAM-like domain acear_RS06115 PF00717 Peptidase S24-like acear_RS06115 PF01726 LexA DNA binding domain acear_RS06120 PF00795 Carbon-nitrogen hydrolase acear_RS06125 PF03553 Na+/H+ antiporter family acear_RS06145 PF13545 Crp-like helix-turn-helix domain acear_RS06145 PF00027 Cyclic nucleotide-binding domain acear_RS06160 PF09515 Thiamine transporter protein (Thia_YuaJ) acear_RS06180 PF00270 DEAD/DEAH box helicase acear_RS06180 PF00570 HRDC domain acear_RS06180 PF16124 RecQ zinc-binding acear_RS06180 PF09382 RQC domain acear_RS06180 PF00271 Helicase conserved C-terminal domain acear_RS06185 PF01966 HD domain acear_RS06185 PF12627 Probable RNA and SrmB- binding site of polymerase A acear_RS06185 PF01743 Poly A polymerase head domain acear_RS06200 PF01546 Peptidase family M20/M25/M40 acear_RS06200 PF07687 Peptidase dimerisation domain acear_RS06205 PF01042 Endoribonuclease L-PSP acear_RS06210 PF13309 HTH domain acear_RS06210 PF08348 YheO-like PAS domain acear_RS06220 PF03313 Serine dehydratase alpha chain acear_RS06225 PF03315 Serine dehydratase beta chain acear_RS06225 PF01842 ACT domain acear_RS06230 PF00196 Bacterial regulatory proteins, luxR family acear_RS06240 PF09861 Lactate racemase N-terminal domain acear_RS06290 PF00155 Aminotransferase class I and II acear_RS06295 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain acear_RS06295 PF00205 Thiamine pyrophosphate enzyme, central domain acear_RS06295 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain acear_RS06325 PF04239 Protein of unknown function (DUF421) acear_RS06335 PF02028 BCCT, betaine/carnitine/choline family transporter acear_RS06345 PF02310 B12 binding domain acear_RS06345 PF02607 B12 binding domain acear_RS06350 PF06253 Trimethylamine methyltransferase (MTTB) acear_RS06360 PF00440 Bacterial regulatory proteins, tetR family acear_RS06365 PF01925 Sulfite exporter TauE/SafE acear_RS06370 PF00188 Cysteine-rich secretory protein family acear_RS06380 PF00877 NlpC/P60 family acear_RS06380 PF01476 LysM domain acear_RS06390 PF01408 Oxidoreductase family, NAD-binding Rossmann fold acear_RS06390 PF02894 Oxidoreductase family, C-terminal alpha/beta domain acear_RS06400 PF06968 Biotin and Thiamin Synthesis associated domain acear_RS06400 PF04055 Radical SAM superfamily acear_RS06405 PF00293 NUDIX domain acear_RS06430 PF00075 RNase H acear_RS06435 PF01435 Peptidase family M48 acear_RS06440 PF12392 Collagenase acear_RS06440 PF01136 Peptidase family U32 acear_RS06450 PF12724 Flavodoxin domain acear_RS06470 PF01641 SelR domain acear_RS06480 PF09313 Domain of unknown function (DUF1971) acear_RS06480 PF03848 Tellurite resistance protein TehB acear_RS06490 PF00890 FAD binding domain acear_RS06490 PF04205 FMN-binding domain acear_RS06495 PF13344 Haloacid dehalogenase-like hydrolase acear_RS06495 PF00293 NUDIX domain acear_RS06500 PF00183 Hsp90 protein acear_RS06510 PF01978 Sugar-specific transcriptional regulator TrmB acear_RS06510 PF11495 Archaeal transcriptional regulator TrmB acear_RS06515 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain acear_RS06515 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain acear_RS06530 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) acear_RS06545 PF00989 PAS fold acear_RS06545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase acear_RS06545 PF16736 Single Cache-like acear_RS06545 PF00512 His Kinase A (phospho-acceptor) domain acear_RS06550 PF13654 AAA domain acear_RS06550 PF05362 Lon protease (S16) C-terminal proteolytic domain acear_RS06560 PF01522 Polysaccharide deacetylase acear_RS06565 PF01520 N-acetylmuramoyl-L-alanine amidase acear_RS06565 PF11741 AMIN domain acear_RS06570 PF00809 Pterin binding enzyme acear_RS06575 PF02607 B12 binding domain acear_RS06575 PF02310 B12 binding domain acear_RS06590 PF00565 Staphylococcal nuclease homologue acear_RS06600 PF00011 Hsp20/alpha crystallin family acear_RS06610 PF00583 Acetyltransferase (GNAT) family acear_RS06615 PF04055 Radical SAM superfamily acear_RS06615 PF12544 Lysine-2,3-aminomutase acear_RS06630 PF02926 THUMP domain acear_RS06630 PF02568 Thiamine biosynthesis protein (ThiI) acear_RS06635 PF00266 Aminotransferase class-V acear_RS06640 PF01910 Thiamine-binding protein acear_RS06650 PF00209 Sodium:neurotransmitter symporter family acear_RS06670 PF03949 Malic enzyme, NAD binding domain acear_RS06670 PF00390 Malic enzyme, N-terminal domain acear_RS06675 PF05343 M42 glutamyl aminopeptidase acear_RS06680 PF05343 M42 glutamyl aminopeptidase acear_RS06685 PF05343 M42 glutamyl aminopeptidase acear_RS06700 PF03699 Uncharacterised protein family (UPF0182) acear_RS06705 PF00809 Pterin binding enzyme acear_RS06710 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit acear_RS06720 PF00970 Oxidoreductase FAD-binding domain acear_RS06720 PF00111 2Fe-2S iron-sulfur cluster binding domain acear_RS06720 PF00175 Oxidoreductase NAD-binding domain acear_RS06725 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit acear_RS06725 PF04060 Putative Fe-S cluster acear_RS06730 PF03598 CO dehydrogenase/acetyl-CoA synthase complex beta subunit acear_RS06730 PF18537 Carbon monoxide dehydrogenase subunit alpha N-terminal domain acear_RS06735 PF03063 Prismane/CO dehydrogenase family acear_RS06740 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain acear_RS06750 PF00990 Diguanylate cyclase, GGDEF domain acear_RS06780 PF04286 Protein of unknown function (DUF445) acear_RS06785 PF00205 Thiamine pyrophosphate enzyme, central domain acear_RS06785 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain acear_RS06785 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain acear_RS06790 PF00528 Binding-protein-dependent transport system inner membrane component acear_RS06795 PF00005 ABC transporter acear_RS06820 PF03190 Protein of unknown function, DUF255 acear_RS06840 PF12850 Calcineurin-like phosphoesterase superfamily domain acear_RS06845 PF17099 Tryptophan transporter TrpP acear_RS06850 PF03466 LysR substrate binding domain acear_RS06850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family acear_RS06860 PF00072 Response regulator receiver domain acear_RS06925 PF03167 Uracil DNA glycosylase superfamily acear_RS06940 PF01312 FlhB HrpN YscU SpaS Family acear_RS06950 PF10576 Iron-sulfur binding domain of endonuclease III acear_RS06950 PF00633 Helix-hairpin-helix motif acear_RS06950 PF00730 HhH-GPD superfamily base excision DNA repair protein acear_RS06955 PF12146 Serine aminopeptidase, S33 acear_RS06960 PF07690 Major Facilitator Superfamily acear_RS06965 PF04284 Protein of unknown function (DUF441) acear_RS06970 PF04029 2-phosphosulpholactate phosphatase acear_RS06975 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) acear_RS06980 PF10942 Protein of unknown function (DUF2619) acear_RS06985 PF03747 ADP-ribosylglycohydrolase acear_RS06990 PF00581 Rhodanese-like domain acear_RS06995 PF00005 ABC transporter acear_RS06995 PF08402 TOBE domain acear_RS07000 PF00528 Binding-protein-dependent transport system inner membrane component acear_RS07015 PF03459 TOBE domain acear_RS07025 PF01066 CDP-alcohol phosphatidyltransferase acear_RS07030 PF00708 Acylphosphatase acear_RS07035 PF02386 Cation transport protein acear_RS07040 PF02254 TrkA-N domain acear_RS07040 PF02080 TrkA-C domain acear_RS07045 PF01385 Probable transposase acear_RS07045 PF07282 Putative transposase DNA-binding domain acear_RS07045 PF12323 Helix-turn-helix domain acear_RS07060 PF00202 Aminotransferase class-III acear_RS07075 PF04239 Protein of unknown function (DUF421) acear_RS07080 PF00005 ABC transporter acear_RS07085 PF01061 ABC-2 type transporter acear_RS07095 PF02386 Cation transport protein acear_RS07100 PF02254 TrkA-N domain acear_RS07100 PF02080 TrkA-C domain acear_RS07100 PF00999 Sodium/hydrogen exchanger family acear_RS07105 PF02254 TrkA-N domain acear_RS07105 PF02080 TrkA-C domain acear_RS07110 PF00072 Response regulator receiver domain acear_RS07110 PF00158 Sigma-54 interaction domain acear_RS07110 PF02954 Bacterial regulatory protein, Fis family acear_RS07115 PF00486 Transcriptional regulatory protein, C terminal acear_RS07115 PF00072 Response regulator receiver domain acear_RS07120 PF13426 PAS domain acear_RS07120 PF00512 His Kinase A (phospho-acceptor) domain acear_RS07120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase acear_RS07120 PF00672 HAMP domain acear_RS07125 PF13276 HTH-like domain acear_RS07125 PF13333 Integrase core domain acear_RS07125 PF00665 Integrase core domain acear_RS07150 PF00072 Response regulator receiver domain acear_RS07175 PF02146 Sir2 family acear_RS07205 PF00082 Subtilase family acear_RS07210 PF00004 ATPase family associated with various cellular activities (AAA) acear_RS07225 PF07687 Peptidase dimerisation domain acear_RS07225 PF01546 Peptidase family M20/M25/M40 acear_RS07230 PF00474 Sodium:solute symporter family acear_RS07235 PF13361 UvrD-like helicase C-terminal domain acear_RS07235 PF00580 UvrD/REP helicase N-terminal domain acear_RS07235 PF12705 PD-(D/E)XK nuclease superfamily acear_RS07245 PF00459 Inositol monophosphatase family acear_RS07250 PF00684 DnaJ central domain acear_RS07250 PF00226 DnaJ domain acear_RS07250 PF01556 DnaJ C terminal domain acear_RS07260 PF07670 Nucleoside recognition acear_RS07270 PF12794 Mechanosensitive ion channel inner membrane domain 1 acear_RS07270 PF00924 Mechanosensitive ion channel acear_RS07270 PF12795 Mechanosensitive ion channel porin domain acear_RS07280 PF17200 Single Cache domain 2 acear_RS07280 PF00672 HAMP domain acear_RS07280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain acear_RS07285 PF01594 AI-2E family transporter acear_RS07290 PF04055 Radical SAM superfamily acear_RS07295 PF01242 6-pyruvoyl tetrahydropterin synthase acear_RS07300 PF06508 Queuosine biosynthesis protein QueC acear_RS07305 PF01869 BadF/BadG/BcrA/BcrD ATPase family acear_RS07330 PF01467 Cytidylyltransferase-like acear_RS07340 PF00271 Helicase conserved C-terminal domain acear_RS07340 PF00270 DEAD/DEAH box helicase acear_RS07340 PF17191 RecG wedge domain acear_RS07345 PF02645 Uncharacterised protein, DegV family COG1307 acear_RS07350 PF02734 DAK2 domain acear_RS07350 PF13684 Dihydroxyacetone kinase family acear_RS07355 PF03780 Asp23 family, cell envelope-related function acear_RS07365 PF00830 Ribosomal L28 family acear_RS07370 PF00390 Malic enzyme, N-terminal domain acear_RS07370 PF03949 Malic enzyme, NAD binding domain acear_RS07380 PF01168 Alanine racemase, N-terminal domain acear_RS07380 PF00842 Alanine racemase, C-terminal domain acear_RS07385 PF00885 6,7-dimethyl-8-ribityllumazine synthase acear_RS07390 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase acear_RS07390 PF00925 GTP cyclohydrolase II acear_RS07395 PF00677 Lumazine binding domain acear_RS07400 PF01872 RibD C-terminal domain acear_RS07400 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region acear_RS07405 PF00834 Ribulose-phosphate 3 epimerase family acear_RS07410 PF16745 RsgA N-terminal domain acear_RS07410 PF03193 RsgA GTPase acear_RS07415 PF03793 PASTA domain acear_RS07415 PF00069 Protein kinase domain acear_RS07425 PF04055 Radical SAM superfamily acear_RS07430 PF01189 16S rRNA methyltransferase RsmB/F acear_RS07430 PF01029 NusB family acear_RS07440 PF04298 Putative neutral zinc metallopeptidase acear_RS07450 PF02911 Formyl transferase, C-terminal domain acear_RS07450 PF00551 Formyl transferase acear_RS07455 PF01327 Polypeptide deformylase acear_RS07460 PF17764 3′ DNA-binding domain (3′BD) acear_RS07460 PF00271 Helicase conserved C-terminal domain acear_RS07460 PF18319 PriA DNA helicase Cys-rich region (CRR) domain acear_RS07460 PF04851 Type III restriction enzyme, res subunit acear_RS07460 PF18074 Primosomal protein N C-terminal domain acear_RS07465 PF02772 S-adenosylmethionine synthetase, central domain acear_RS07465 PF02773 S-adenosylmethionine synthetase, C-terminal domain acear_RS07465 PF00438 S-adenosylmethionine synthetase, N-terminal domain acear_RS07470 PF00005 ABC transporter acear_RS07475 PF02653 Branched-chain amino acid transport system / permease component acear_RS07485 PF02664 S-Ribosylhomocysteinase (LuxS) acear_RS07490 PF04127 DNA / pantothenate metabolism flavoprotein acear_RS07490 PF02441 Flavoprotein acear_RS07495 PF01192 RNA polymerase Rpb6 acear_RS07500 PF00625 Guanylate kinase acear_RS07505 PF04025 Domain of unknown function (DUF370) acear_RS07510 PF03755 YicC-like family, N-terminal region acear_RS07510 PF08340 Domain of unknown function (DUF1732) acear_RS07515 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase acear_RS07515 PF01502 Phosphoribosyl-AMP cyclohydrolase acear_RS07520 PF00977 Histidine biosynthesis protein acear_RS07525 PF00977 Histidine biosynthesis protein acear_RS07530 PF00117 Glutamine amidotransferase class-I acear_RS07535 PF00475 Imidazoleglycerol-phosphate dehydratase acear_RS07540 PF00815 Histidinol dehydrogenase acear_RS07545 PF01634 ATP phosphoribosyltransferase acear_RS07550 PF13393 Histidyl-tRNA synthetase acear_RS07555 PF07486 Cell Wall Hydrolase acear_RS07560 PF00334 Nucleoside diphosphate kinase acear_RS07565 PF00395 S-layer homology domain acear_RS07580 PF02472 Biopolymer transport protein ExbD/TolR acear_RS07585 PF01618 MotA/TolQ/ExbB proton channel family acear_RS07590 PF01336 OB-fold nucleic acid binding domain acear_RS07590 PF07733 Bacterial DNA polymerase III alpha NTPase domain acear_RS07590 PF17657 Bacterial DNA polymerase III alpha subunit finger domain acear_RS07590 PF14579 Helix-hairpin-helix motif acear_RS07590 PF02811 PHP domain acear_RS07595 PF07670 Nucleoside recognition acear_RS07600 PF07670 Nucleoside recognition acear_RS07605 PF04232 Stage V sporulation protein S (SpoVS) acear_RS07610 PF13277 YmdB-like protein acear_RS07615 PF01966 HD domain acear_RS07615 PF00013 KH domain acear_RS07615 PF12072 Domain of unknown function (DUF3552) acear_RS07640 PF00154 recA bacterial DNA recombination protein acear_RS07655 PF00994 Probable molybdopterin binding domain acear_RS07655 PF02464 Competence-damaged protein acear_RS07655 PF18146 Damage-inducible protein CinA KH domain acear_RS07665 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal acear_RS07665 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III acear_RS07680 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain acear_RS07680 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 acear_RS07690 PF01476 LysM domain acear_RS07690 PF00246 Zinc carboxypeptidase acear_RS07705 PF07670 Nucleoside recognition acear_RS07710 PF00465 Iron-containing alcohol dehydrogenase acear_RS07715 PF00155 Aminotransferase class I and II acear_RS07720 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain acear_RS07725 PF00571 CBS domain acear_RS07730 PF01174 SNO glutamine amidotransferase family acear_RS07735 PF01680 SOR/SNZ family acear_RS07740 PF00392 Bacterial regulatory proteins, gntR family acear_RS07740 PF00155 Aminotransferase class I and II acear_RS07760 PF00781 Diacylglycerol kinase catalytic domain acear_RS07775 PF05193 Peptidase M16 inactive domain acear_RS07775 PF00675 Insulinase (Peptidase family M16) acear_RS07825 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain acear_RS07825 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 acear_RS07830 PF13247 4Fe-4S dicluster domain acear_RS07835 PF17862 AAA+ lid domain acear_RS07835 PF06480 FtsH Extracellular acear_RS07835 PF01434 Peptidase family M41 acear_RS07835 PF00004 ATPase family associated with various cellular activities (AAA) acear_RS07845 PF04608 Phosphatidylglycerophosphatase A acear_RS07850 PF01066 CDP-alcohol phosphatidyltransferase acear_RS07855 PF00919 Uncharacterized protein family UPF0004 acear_RS07855 PF18693 TRAM domain acear_RS07855 PF04055 Radical SAM superfamily acear_RS07865 PF01227 GTP cyclohydrolase I acear_RS07890 PF00206 Lyase acear_RS07890 PF14698 Argininosuccinate lyase C-terminal acear_RS07900 PF00764 Arginosuccinate synthase acear_RS07905 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain acear_RS07905 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain acear_RS07910 PF02142 MGS-like domain acear_RS07910 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain acear_RS07910 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain acear_RS07915 PF00117 Glutamine amidotransferase class-I acear_RS07915 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain acear_RS07920 PF00474 Sodium:solute symporter family acear_RS07930 PF04239 Protein of unknown function (DUF421) acear_RS07935 PF01979 Amidohydrolase family acear_RS07940 PF01297 Zinc-uptake complex component A periplasmic acear_RS07940 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment acear_RS07945 PF00005 ABC transporter acear_RS07950 PF00950 ABC 3 transport family acear_RS07955 PF03323 Bacillus/Clostridium GerA spore germination protein acear_RS07960 PF03845 Spore germination protein acear_RS07965 PF03845 Spore germination protein acear_RS07985 PF00202 Aminotransferase class-III acear_RS07990 PF00696 Amino acid kinase family acear_RS07995 PF01960 ArgJ family acear_RS08000 PF02774 Semialdehyde dehydrogenase, dimerisation domain acear_RS08000 PF01118 Semialdehyde dehydrogenase, NAD binding domain acear_RS08005 PF00313 'Cold-shock' DNA-binding domain acear_RS08010 PF00689 Cation transporting ATPase, C-terminus acear_RS08010 PF00690 Cation transporter/ATPase, N-terminus acear_RS08015 PF00176 SNF2 family N-terminal domain acear_RS08015 PF00271 Helicase conserved C-terminal domain acear_RS08035 PF01975 Survival protein SurE acear_RS08060 PF02673 Bacitracin resistance protein BacA acear_RS08065 PF03838 Recombination protein U acear_RS08070 PF03979 Sigma-70 factor, region 1.1 acear_RS08070 PF04545 Sigma-70, region 4 acear_RS08070 PF04539 Sigma-70 region 3 acear_RS08070 PF00140 Sigma-70 factor, region 1.2 acear_RS08070 PF04542 Sigma-70 region 2 acear_RS08075 PF04070 Domain of unknown function (DUF378) acear_RS08085 PF01580 FtsK/SpoIIIE family acear_RS08085 PF13491 4TM region of DNA translocase FtsK/SpoIIIE acear_RS08085 PF17854 FtsK alpha domain acear_RS08085 PF09397 Ftsk gamma domain acear_RS08090 PF02690 Na+/Pi-cotransporter acear_RS08095 PF02690 Na+/Pi-cotransporter acear_RS08105 PF00574 Clp protease acear_RS08115 PF05690 Thiazole biosynthesis protein ThiG acear_RS08120 PF06968 Biotin and Thiamin Synthesis associated domain acear_RS08120 PF04055 Radical SAM superfamily acear_RS08125 PF02581 Thiamine monophosphate synthase acear_RS08130 PF00753 Metallo-beta-lactamase superfamily acear_RS08130 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain acear_RS08130 PF17770 Ribonuclease J C-terminal domain acear_RS08135 PF00701 Dihydrodipicolinate synthetase family acear_RS08140 PF13840 ACT domain acear_RS08140 PF00696 Amino acid kinase family acear_RS08145 PF01118 Semialdehyde dehydrogenase, NAD binding domain acear_RS08145 PF02774 Semialdehyde dehydrogenase, dimerisation domain acear_RS08150 PF02441 Flavoprotein acear_RS08155 PF16924 Dipicolinate synthase subunit A N-terminal domain acear_RS08155 PF01262 Alanine dehydrogenase/PNT, C-terminal domain acear_RS08160 PF01113 Dihydrodipicolinate reductase, N-terminus acear_RS08160 PF05173 Dihydrodipicolinate reductase, C-terminus acear_RS08170 PF05239 PRC-barrel domain acear_RS08175 PF00692 dUTPase acear_RS08180 PF04294 VanW like protein acear_RS08185 PF01522 Polysaccharide deacetylase acear_RS08190 PF01522 Polysaccharide deacetylase acear_RS08200 PF01471 Putative peptidoglycan binding domain acear_RS08200 PF07486 Cell Wall Hydrolase acear_RS08205 PF06733 DEAD_2 acear_RS08205 PF13307 Helicase C-terminal domain acear_RS08210 PF01261 Xylose isomerase-like TIM barrel acear_RS08215 PF00575 S1 RNA binding domain acear_RS08215 PF01138 3' exoribonuclease family, domain 1 acear_RS08215 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain acear_RS08215 PF00013 KH domain acear_RS08215 PF03725 3' exoribonuclease family, domain 2 acear_RS08220 PF00312 Ribosomal protein S15 acear_RS08225 PF01687 Riboflavin kinase acear_RS08225 PF06574 FAD synthetase acear_RS08230 PF02272 DHHA1 domain acear_RS08230 PF01368 DHH family acear_RS08235 PF02033 Ribosome-binding factor A acear_RS08240 PF11987 Translation-initiation factor 2 acear_RS08240 PF04760 Translation initiation factor IF-2, N-terminal region acear_RS08240 PF00009 Elongation factor Tu GTP binding domain acear_RS08245 PF13184 NusA-like KH domain acear_RS08245 PF08529 NusA N-terminal domain acear_RS08245 PF00575 S1 RNA binding domain acear_RS08250 PF17384 RimP C-terminal SH3 domain acear_RS08250 PF02576 RimP N-terminal domain acear_RS08255 PF01336 OB-fold nucleic acid binding domain acear_RS08255 PF17657 Bacterial DNA polymerase III alpha subunit finger domain acear_RS08255 PF02811 PHP domain acear_RS08255 PF07733 Bacterial DNA polymerase III alpha NTPase domain acear_RS08255 PF00929 Exonuclease acear_RS08255 PF11490 DNA polymerase III polC-type N-terminus II acear_RS08255 PF14579 Helix-hairpin-helix motif acear_RS08260 PF02308 MgtC family acear_RS08265 PF00535 Glycosyl transferase family 2 acear_RS08270 PF04551 GcpE protein acear_RS08275 PF01966 HD domain acear_RS08280 PF13180 PDZ domain acear_RS08280 PF02163 Peptidase family M50 acear_RS08285 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase acear_RS08285 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain acear_RS08285 PF13288 DXP reductoisomerase C-terminal domain acear_RS08290 PF01594 AI-2E family transporter acear_RS08300 PF01255 Putative undecaprenyl diphosphate synthase acear_RS08305 PF01765 Ribosome recycling factor acear_RS08310 PF00696 Amino acid kinase family acear_RS08315 PF00889 Elongation factor TS acear_RS08320 PF00318 Ribosomal protein S2 acear_RS08345 PF04545 Sigma-70, region 4 acear_RS08345 PF04539 Sigma-70 region 3 acear_RS08345 PF04542 Sigma-70 region 2 acear_RS08355 PF03975 CheD chemotactic sensory transduction acear_RS08360 PF04509 CheC-like family acear_RS08370 PF10609 NUBPL iron-transfer P-loop NTPase acear_RS08375 PF00448 SRP54-type protein, GTPase domain acear_RS08380 PF00771 FHIPEP family acear_RS08385 PF01312 FlhB HrpN YscU SpaS Family acear_RS08390 PF01311 Bacterial export proteins, family 1 acear_RS08395 PF01313 Bacterial export proteins, family 3 acear_RS08400 PF00813 FliP family acear_RS08410 PF04509 CheC-like family acear_RS08410 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term acear_RS08415 PF02154 Flagellar motor switch protein FliM acear_RS08415 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term acear_RS08425 PF13677 Membrane MotB of proton-channel complex MotA/MotB acear_RS08425 PF00691 OmpA family acear_RS08430 PF01618 MotA/TolQ/ExbB proton channel family acear_RS08440 PF07559 Flagellar basal body protein FlaE acear_RS08440 PF00460 Flagella basal body rod protein acear_RS08440 PF06429 Flagellar basal body rod FlgEFG protein C-terminal acear_RS08450 PF03963 Flagellar hook capping protein - N-terminal region acear_RS08455 PF02120 Flagellar hook-length control protein FliK acear_RS08470 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain acear_RS08470 PF02874 ATP synthase alpha/beta family, beta-barrel domain acear_RS08470 PF18269 T3SS EscN ATPase C-terminal domain acear_RS08475 PF02108 Flagellar assembly protein FliH acear_RS08480 PF14842 FliG N-terminal domain acear_RS08480 PF14841 FliG middle domain acear_RS08480 PF01706 FliG C-terminal domain acear_RS08485 PF08345 Flagellar M-ring protein C-terminal acear_RS08485 PF01514 Secretory protein of YscJ/FliF family acear_RS08490 PF02049 Flagellar hook-basal body complex protein FliE acear_RS08495 PF00460 Flagella basal body rod protein acear_RS08495 PF06429 Flagellar basal body rod FlgEFG protein C-terminal acear_RS08500 PF00460 Flagella basal body rod protein acear_RS08505 PF08222 CodY helix-turn-helix domain acear_RS08505 PF06018 CodY GAF-like domain acear_RS08510 PF00004 ATPase family associated with various cellular activities (AAA) acear_RS08510 PF07724 AAA domain (Cdc48 subfamily) acear_RS08510 PF10431 C-terminal, D2-small domain, of ClpB protein acear_RS08515 PF00227 Proteasome subunit acear_RS08520 PF01131 DNA topoisomerase acear_RS08520 PF01751 Toprim domain acear_RS08520 PF01396 Topoisomerase DNA binding C4 zinc finger acear_RS08530 PF17782 DprA winged helix domain acear_RS08530 PF02481 DNA recombination-mediator protein A acear_RS08535 PF01078 Magnesium chelatase, subunit ChlI acear_RS08535 PF13335 Magnesium chelatase, subunit ChlI C-terminal acear_RS08540 PF02021 Uncharacterised protein family UPF0102 acear_RS08550 PF01906 Putative heavy-metal-binding acear_RS08560 PF01351 Ribonuclease HII acear_RS08565 PF10502 Signal peptidase, peptidase S26 acear_RS08570 PF01245 Ribosomal protein L19 acear_RS08575 PF09936 SAM-dependent RNA methyltransferase acear_RS08580 PF01746 tRNA (Guanine-1)-methyltransferase acear_RS08585 PF01782 RimM N-terminal domain acear_RS08585 PF05239 PRC-barrel domain acear_RS08595 PF00886 Ribosomal protein S16 acear_RS08600 PF02978 Signal peptide binding domain acear_RS08600 PF02881 SRP54-type protein, helical bundle domain acear_RS08600 PF00448 SRP54-type protein, GTPase domain acear_RS08605 PF04297 Putative helix-turn-helix protein, YlxM / p13 like acear_RS08610 PF00448 SRP54-type protein, GTPase domain acear_RS08610 PF02881 SRP54-type protein, helical bundle domain acear_RS08620 PF06470 SMC proteins Flexible Hinge Domain acear_RS08620 PF02463 RecF/RecN/SMC N terminal domain acear_RS08625 PF04232 Stage V sporulation protein S (SpoVS) acear_RS08635 PF01479 S4 domain acear_RS08635 PF00849 RNA pseudouridylate synthase acear_RS08640 PF07943 Penicillin-binding protein 5, C-terminal domain acear_RS08640 PF00768 D-alanyl-D-alanine carboxypeptidase acear_RS08645 PF09579 Sporulation protein YtfJ (Spore_YtfJ) acear_RS08655 PF13187 4Fe-4S dicluster domain acear_RS08655 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain acear_RS08655 PF01077 Nitrite and sulphite reductase 4Fe-4S domain acear_RS08660 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B acear_RS08660 PF00175 Oxidoreductase NAD-binding domain acear_RS08665 PF17179 4Fe-4S dicluster domain acear_RS08670 PF04079 Segregation and condensation complex subunit ScpB acear_RS08675 PF02616 Segregation and condensation protein ScpA acear_RS08680 PF00579 tRNA synthetases class I (W and Y) acear_RS08685 PF02163 Peptidase family M50 acear_RS08690 PF01743 Poly A polymerase head domain acear_RS08690 PF00571 CBS domain acear_RS08690 PF01368 DHH family acear_RS08690 PF12627 Probable RNA and SrmB- binding site of polymerase A acear_RS08690 PF02272 DHHA1 domain acear_RS08695 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain acear_RS08695 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain acear_RS08700 PF00708 Acylphosphatase acear_RS08705 PF08359 YsiA-like protein, C-terminal region acear_RS08705 PF00440 Bacterial regulatory proteins, tetR family acear_RS08715 PF17131 Outer membrane lipoprotein-sorting protein acear_RS08720 PF03176 MMPL family acear_RS08725 PF01869 BadF/BadG/BcrA/BcrD ATPase family acear_RS08740 PF02535 ZIP Zinc transporter acear_RS08745 PF03323 Bacillus/Clostridium GerA spore germination protein acear_RS08750 PF14097 Stage V sporulation protein AE1 acear_RS08755 PF03862 SpoVAC/SpoVAEB sporulation membrane protein acear_RS08760 PF07451 Stage V sporulation protein AD (SpoVAD) acear_RS08765 PF03862 SpoVAC/SpoVAEB sporulation membrane protein acear_RS08775 PF04539 Sigma-70 region 3 acear_RS08775 PF04542 Sigma-70 region 2 acear_RS08775 PF04545 Sigma-70, region 4 acear_RS08780 PF13581 Histidine kinase-like ATPase domain acear_RS08785 PF01740 STAS domain acear_RS08790 PF00768 D-alanyl-D-alanine carboxypeptidase acear_RS08790 PF07943 Penicillin-binding protein 5, C-terminal domain acear_RS08795 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain acear_RS08795 PF00591 Glycosyl transferase family, a/b domain acear_RS08795 PF02885 Glycosyl transferase family, helical bundle domain acear_RS08800 PF01048 Phosphorylase superfamily acear_RS08805 PF01676 Metalloenzyme superfamily acear_RS08810 PF01944 Stage II sporulation protein M acear_RS08820 PF00293 NUDIX domain acear_RS08830 PF01546 Peptidase family M20/M25/M40 acear_RS08830 PF07687 Peptidase dimerisation domain acear_RS08835 PF01168 Alanine racemase, N-terminal domain acear_RS08840 PF02310 B12 binding domain acear_RS08840 PF02607 B12 binding domain acear_RS08855 PF00209 Sodium:neurotransmitter symporter family acear_RS08865 PF00535 Glycosyl transferase family 2 acear_RS08880 PF02629 CoA binding domain acear_RS08880 PF06971 Putative DNA-binding protein N-terminus acear_RS08885 PF00072 Response regulator receiver domain acear_RS08885 PF08769 Sporulation initiation factor Spo0A C terminal acear_RS08890 PF05580 SpoIVB peptidase S55 acear_RS08890 PF17820 PDZ domain acear_RS08895 PF02463 RecF/RecN/SMC N terminal domain acear_RS08900 PF02863 Arginine repressor, C-terminal domain acear_RS08900 PF01316 Arginine repressor, DNA binding domain acear_RS08905 PF01513 ATP-NAD kinase acear_RS08910 PF01479 S4 domain acear_RS08910 PF01728 FtsJ-like methyltransferase acear_RS08915 PF02779 Transketolase, pyrimidine binding domain acear_RS08915 PF02780 Transketolase, C-terminal domain acear_RS08915 PF13292 1-deoxy-D-xylulose-5-phosphate synthase acear_RS08920 PF00348 Polyprenyl synthetase acear_RS08925 PF02609 Exonuclease VII small subunit acear_RS08930 PF02601 Exonuclease VII, large subunit acear_RS08930 PF13742 OB-fold nucleic acid binding domain acear_RS08935 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain acear_RS08935 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain acear_RS08940 PF00814 Glycoprotease family acear_RS08945 PF01029 NusB family acear_RS08960 PF03780 Asp23 family, cell envelope-related function acear_RS08965 PF02785 Biotin carboxylase C-terminal domain acear_RS08965 PF00289 Biotin carboxylase, N-terminal domain acear_RS08965 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain acear_RS08970 PF00364 Biotin-requiring enzyme acear_RS08970 PF02436 Conserved carboxylase domain acear_RS08970 PF00682 HMGL-like acear_RS08990 PF09546 Stage III sporulation protein AE (spore_III_AE) acear_RS08995 PF06686 Stage III sporulation protein AC/AD protein family acear_RS09000 PF06686 Stage III sporulation protein AC/AD protein family acear_RS09015 PF01132 Elongation factor P (EF-P) OB domain acear_RS09015 PF08207 Elongation factor P (EF-P) KOW-like domain acear_RS09015 PF09285 Elongation factor P, C-terminal acear_RS09020 PF01321 Creatinase/Prolidase N-terminal domain acear_RS09020 PF00557 Metallopeptidase family M24 acear_RS09025 PF01220 Dehydroquinase class II acear_RS09030 PF01761 3-dehydroquinate synthase acear_RS09035 PF01202 Shikimate kinase acear_RS09040 PF01264 Chorismate synthase acear_RS09045 PF03958 Bacterial type II/III secretion system short domain acear_RS09045 PF07660 Secretin and TonB N terminus short domain acear_RS09045 PF11741 AMIN domain acear_RS09045 PF00263 Bacterial type II and III secretion system protein acear_RS09065 PF02491 SHS2 domain inserted in FTSA acear_RS09090 PF06750 Bacterial Peptidase A24 N-terminal domain acear_RS09090 PF01478 Type IV leader peptidase family acear_RS09100 PF07963 Prokaryotic N-terminal methylation motif acear_RS09100 PF08334 Type II secretion system (T2SS), protein G acear_RS09105 PF07963 Prokaryotic N-terminal methylation motif acear_RS09105 PF00114 Pilin (bacterial filament) acear_RS09110 PF00482 Type II secretion system (T2SS), protein F acear_RS09115 PF00437 Type II/IV secretion system protein acear_RS09120 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain acear_RS09120 PF00437 Type II/IV secretion system protein acear_RS09125 PF18317 Shikimate 5'-dehydrogenase C-terminal domain acear_RS09125 PF01488 Shikimate / quinate 5-dehydrogenase acear_RS09125 PF08501 Shikimate dehydrogenase substrate binding domain acear_RS09135 PF07670 Nucleoside recognition acear_RS09145 PF07664 Ferrous iron transport protein B C terminus acear_RS09145 PF07670 Nucleoside recognition acear_RS09145 PF04023 FeoA domain acear_RS09145 PF17910 FeoB cytosolic helical domain acear_RS09145 PF02421 Ferrous iron transport protein B acear_RS09150 PF01475 Ferric uptake regulator family acear_RS09155 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) acear_RS09160 PF02152 Dihydroneopterin aldolase acear_RS09165 PF00809 Pterin binding enzyme acear_RS09170 PF01966 HD domain acear_RS09180 PF01969 Protein of unknown function DUF111 acear_RS09185 PF07992 Pyridine nucleotide-disulphide oxidoreductase acear_RS09190 PF14535 AMP-binding enzyme C-terminal domain acear_RS09190 PF00501 AMP-binding enzyme acear_RS09200 PF02001 Protein of unknown function DUF134 acear_RS09210 PF10609 NUBPL iron-transfer P-loop NTPase acear_RS09235 PF01475 Ferric uptake regulator family acear_RS09240 PF07729 FCD domain acear_RS09240 PF00392 Bacterial regulatory proteins, gntR family acear_RS09245 PF09861 Lactate racemase N-terminal domain acear_RS09250 PF02754 Cysteine-rich domain acear_RS09255 PF01565 FAD binding domain acear_RS09255 PF02913 FAD linked oxidases, C-terminal domain acear_RS09260 PF02652 L-lactate permease acear_RS09265 PF07729 FCD domain acear_RS09265 PF00392 Bacterial regulatory proteins, gntR family acear_RS09270 PF01565 FAD binding domain acear_RS09270 PF02913 FAD linked oxidases, C-terminal domain acear_RS09275 PF00766 Electron transfer flavoprotein FAD-binding domain acear_RS09275 PF13237 4Fe-4S dicluster domain acear_RS09275 PF01012 Electron transfer flavoprotein domain acear_RS09280 PF01012 Electron transfer flavoprotein domain acear_RS09295 PF00672 HAMP domain acear_RS09295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase acear_RS09310 PF00571 CBS domain acear_RS09310 PF00478 IMP dehydrogenase / GMP reductase domain acear_RS09320 PF01476 LysM domain acear_RS09320 PF00877 NlpC/P60 family acear_RS09325 PF00342 Phosphoglucose isomerase acear_RS09345 PF05378 Hydantoinase/oxoprolinase N-terminal region acear_RS09345 PF01968 Hydantoinase/oxoprolinase acear_RS09350 PF00850 Histone deacetylase domain acear_RS09370 PF07992 Pyridine nucleotide-disulphide oxidoreductase acear_RS09375 PF07992 Pyridine nucleotide-disulphide oxidoreductase acear_RS09375 PF13247 4Fe-4S dicluster domain acear_RS09375 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster acear_RS09380 PF01645 Conserved region in glutamate synthase acear_RS09380 PF13187 4Fe-4S dicluster domain acear_RS09385 PF00310 Glutamine amidotransferases class-II acear_RS09390 PF00543 Nitrogen regulatory protein P-II acear_RS09395 PF00909 Ammonium Transporter Family acear_RS09400 PF00120 Glutamine synthetase, catalytic domain acear_RS09400 PF03951 Glutamine synthetase, beta-Grasp domain acear_RS09405 PF02540 NAD synthase acear_RS09410 PF13537 Glutamine amidotransferase domain acear_RS09410 PF00733 Asparagine synthase acear_RS09415 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain acear_RS09415 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain acear_RS09420 PF07969 Amidohydrolase family acear_RS09425 PF00158 Sigma-54 interaction domain acear_RS09425 PF00989 PAS fold acear_RS09425 PF02954 Bacterial regulatory protein, Fis family acear_RS09430 PF02667 Short chain fatty acid transporter acear_RS09435 PF00108 Thiolase, N-terminal domain acear_RS09435 PF02803 Thiolase, C-terminal domain acear_RS09440 PF01144 Coenzyme A transferase acear_RS09445 PF01144 Coenzyme A transferase acear_RS09450 PF01255 Putative undecaprenyl diphosphate synthase acear_RS09455 PF01554 MatE acear_RS09465 PF01476 LysM domain acear_RS09470 PF02743 Cache domain acear_RS09470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain acear_RS09470 PF00672 HAMP domain acear_RS09485 PF01554 MatE acear_RS09490 PF00873 AcrB/AcrD/AcrF family acear_RS09495 PF00529 HlyD membrane-fusion protein of T1SS acear_RS09495 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion acear_RS09510 PF06253 Trimethylamine methyltransferase (MTTB) acear_RS09520 PF01968 Hydantoinase/oxoprolinase acear_RS09520 PF05378 Hydantoinase/oxoprolinase N-terminal region acear_RS09525 PF00155 Aminotransferase class I and II acear_RS09530 PF01678 Diaminopimelate epimerase acear_RS09535 PF02887 Pyruvate kinase, alpha/beta domain acear_RS09535 PF00224 Pyruvate kinase, barrel domain acear_RS09535 PF00391 PEP-utilising enzyme, mobile domain acear_RS09540 PF00365 Phosphofructokinase acear_RS09545 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit acear_RS09550 PF17848 Acetyl-coA carboxylase zinc finger domain acear_RS09550 PF01039 Carboxyl transferase domain acear_RS09560 PF00290 Tryptophan synthase alpha chain acear_RS09565 PF00291 Pyridoxal-phosphate dependent enzyme acear_RS09570 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase acear_RS09575 PF00218 Indole-3-glycerol phosphate synthase acear_RS09580 PF02885 Glycosyl transferase family, helical bundle domain acear_RS09580 PF00591 Glycosyl transferase family, a/b domain acear_RS09585 PF00425 chorismate binding enzyme acear_RS09585 PF04715 Anthranilate synthase component I, N terminal region acear_RS09590 PF18152 DAHP synthase ferredoxin-like domain acear_RS09590 PF00793 DAHP synthetase I family acear_RS09595 PF02081 Tryptophan RNA-binding attenuator protein acear_RS09605 PF04608 Phosphatidylglycerophosphatase A acear_RS09610 PF07733 Bacterial DNA polymerase III alpha NTPase domain acear_RS09610 PF17657 Bacterial DNA polymerase III alpha subunit finger domain acear_RS09610 PF02811 PHP domain acear_RS09610 PF01336 OB-fold nucleic acid binding domain acear_RS09610 PF14579 Helix-hairpin-helix motif acear_RS09625 PF00155 Aminotransferase class I and II acear_RS09630 PF03144 Elongation factor Tu domain 2 acear_RS09630 PF00009 Elongation factor Tu GTP binding domain acear_RS09630 PF14492 Elongation Factor G, domain II acear_RS09630 PF00679 Elongation factor G C-terminus acear_RS09635 PF02811 PHP domain acear_RS09640 PF01894 Uncharacterised protein family UPF0047 acear_RS09645 PF01184 GPR1/FUN34/yaaH family acear_RS09650 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region acear_RS09650 PF00037 4Fe-4S binding domain acear_RS09650 PF02256 Iron hydrogenase small subunit acear_RS09650 PF02906 Iron only hydrogenase large subunit, C-terminal domain acear_RS09655 PF00037 4Fe-4S binding domain acear_RS09655 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region acear_RS09655 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit acear_RS09665 PF01475 Ferric uptake regulator family acear_RS09670 PF01106 NifU-like domain acear_RS09685 PF13193 AMP-binding enzyme C-terminal domain acear_RS09685 PF00501 AMP-binding enzyme acear_RS09690 PF00080 Copper/zinc superoxide dismutase (SODC) acear_RS09700 PF00313 'Cold-shock' DNA-binding domain acear_RS09705 PF00313 'Cold-shock' DNA-binding domain acear_RS09715 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II acear_RS09715 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg acear_RS09730 PF00588 SpoU rRNA Methylase family acear_RS09740 PF01048 Phosphorylase superfamily acear_RS09745 PF18152 DAHP synthase ferredoxin-like domain acear_RS09745 PF00793 DAHP synthetase I family acear_RS09750 PF00202 Aminotransferase class-III acear_RS09760 PF06968 Biotin and Thiamin Synthesis associated domain acear_RS09760 PF04055 Radical SAM superfamily acear_RS09765 PF08331 Domain of unknown function (DUF1730) acear_RS09770 PF01979 Amidohydrolase family acear_RS09775 PF13614 AAA domain acear_RS09795 PF00989 PAS fold acear_RS09795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase acear_RS09795 PF00512 His Kinase A (phospho-acceptor) domain acear_RS09795 PF16736 Single Cache-like acear_RS09805 PF01609 Transposase DDE domain acear_RS09810 PF05504 Spore germination B3/ GerAC like, C-terminal acear_RS09820 PF00512 His Kinase A (phospho-acceptor) domain acear_RS09820 PF18719 ArlS sensor domain acear_RS09820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase acear_RS09825 PF00072 Response regulator receiver domain acear_RS09825 PF00486 Transcriptional regulatory protein, C terminal acear_RS09830 PF00005 ABC transporter acear_RS09830 PF02687 FtsX-like permease family acear_RS09830 PF12704 MacB-like periplasmic core domain acear_RS09835 PF00005 ABC transporter acear_RS09860 PF01554 MatE acear_RS09865 PF00920 Dehydratase family acear_RS09870 PF02548 Ketopantoate hydroxymethyltransferase acear_RS09875 PF02447 GntP family permease acear_RS09885 PF01609 Transposase DDE domain acear_RS09905 PF01966 HD domain acear_RS09910 PF00491 Arginase family acear_RS09920 PF07687 Peptidase dimerisation domain acear_RS09920 PF01546 Peptidase family M20/M25/M40 acear_RS09925 PF00221 Aromatic amino acid lyase acear_RS09930 PF03606 C4-dicarboxylate anaerobic carrier acear_RS09935 PF13191 AAA ATPase domain acear_RS09935 PF00211 Adenylate and Guanylate cyclase catalytic domain acear_RS09940 PF01979 Amidohydrolase family acear_RS09945 PF02971 Formiminotransferase domain acear_RS09945 PF07837 Formiminotransferase domain, N-terminal subdomain acear_RS09955 PF01175 Urocanase Rossmann-like domain acear_RS09955 PF17392 Urocanase C-terminal domain acear_RS09955 PF17391 Urocanase N-terminal domain acear_RS09965 PF05504 Spore germination B3/ GerAC like, C-terminal acear_RS09980 PF03323 Bacillus/Clostridium GerA spore germination protein acear_RS09985 PF03323 Bacillus/Clostridium GerA spore germination protein acear_RS09995 PF05504 Spore germination B3/ GerAC like, C-terminal acear_RS10000 PF00009 Elongation factor Tu GTP binding domain acear_RS10005 PF01507 Phosphoadenosine phosphosulfate reductase family acear_RS10020 PF00403 Heavy-metal-associated domain acear_RS10025 PF02683 Cytochrome C biogenesis protein transmembrane region acear_RS10030 PF17910 FeoB cytosolic helical domain acear_RS10030 PF02421 Ferrous iron transport protein B acear_RS10030 PF07670 Nucleoside recognition acear_RS10030 PF07664 Ferrous iron transport protein B C terminus acear_RS10045 PF02082 Transcriptional regulator acear_RS10050 PF00291 Pyridoxal-phosphate dependent enzyme acear_RS10055 PF00171 Aldehyde dehydrogenase family acear_RS10055 PF00465 Iron-containing alcohol dehydrogenase acear_RS10100 PF00924 Mechanosensitive ion channel acear_RS10105 PF13411 MerR HTH family regulatory protein acear_RS10125 PF01814 Hemerythrin HHE cation binding domain acear_RS10130 PF00313 'Cold-shock' DNA-binding domain acear_RS10140 PF00082 Subtilase family acear_RS10140 PF05922 Peptidase inhibitor I9 acear_RS10150 PF01645 Conserved region in glutamate synthase acear_RS10150 PF13187 4Fe-4S dicluster domain acear_RS10165 PF05922 Peptidase inhibitor I9 acear_RS10165 PF00082 Subtilase family acear_RS10175 PF00990 Diguanylate cyclase, GGDEF domain acear_RS10175 PF00563 EAL domain acear_RS10175 PF05231 MASE1 acear_RS10175 PF08448 PAS fold acear_RS10175 PF13426 PAS domain acear_RS10175 PF08447 PAS fold acear_RS10195 PF00271 Helicase conserved C-terminal domain acear_RS10195 PF00270 DEAD/DEAH box helicase acear_RS10200 PF00689 Cation transporting ATPase, C-terminus acear_RS10200 PF00690 Cation transporter/ATPase, N-terminus acear_RS10240 PF00107 Zinc-binding dehydrogenase acear_RS10240 PF08240 Alcohol dehydrogenase GroES-like domain acear_RS10245 PF03180 NLPA lipoprotein acear_RS10250 PF13091 PLD-like domain acear_RS10260 PF02632 BioY family acear_RS10265 PF12838 4Fe-4S dicluster domain acear_RS10270 PF01339 CheB methylesterase acear_RS10270 PF00072 Response regulator receiver domain acear_RS10275 PF01458 Uncharacterized protein family (UPF0051) acear_RS10280 PF00005 ABC transporter acear_RS10280 PF12399 Branched-chain amino acid ATP-binding cassette transporter acear_RS10295 PF01022 Bacterial regulatory protein, arsR family acear_RS10310 PF00266 Aminotransferase class-V acear_RS10320 PF01758 Sodium Bile acid symporter family acear_RS10330 PF01022 Bacterial regulatory protein, arsR family acear_RS10335 PF00665 Integrase core domain acear_RS10335 PF13276 HTH-like domain acear_RS10335 PF13333 Integrase core domain acear_RS10350 PF13847 Methyltransferase domain acear_RS10360 PF06968 Biotin and Thiamin Synthesis associated domain acear_RS10360 PF04055 Radical SAM superfamily acear_RS10395 PF01964 Radical SAM ThiC family acear_RS10400 PF02110 Hydroxyethylthiazole kinase family acear_RS10405 PF02581 Thiamine monophosphate synthase acear_RS10410 PF02581 Thiamine monophosphate synthase acear_RS10410 PF08543 Phosphomethylpyrimidine kinase acear_RS10415 PF00330 Aconitase family (aconitate hydratase) acear_RS10415 PF11791 Aconitate B N-terminal domain acear_RS10415 PF06434 Aconitate hydratase 2 N-terminus acear_RS10420 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain acear_RS10420 PF07992 Pyridine nucleotide-disulphide oxidoreductase acear_RS10425 PF01022 Bacterial regulatory protein, arsR family acear_RS10430 PF01938 TRAM domain acear_RS10430 PF05958 tRNA (Uracil-5-)-methyltransferase acear_RS10435 PF18324 Hypothetical protein TT1725 acear_RS10435 PF00180 Isocitrate/isopropylmalate dehydrogenase acear_RS10440 PF02637 GatB domain acear_RS10440 PF02934 GatB/GatE catalytic domain acear_RS10445 PF01425 Amidase acear_RS10450 PF02686 Glu-tRNAGln amidotransferase C subunit acear_RS10455 PF01653 NAD-dependent DNA ligase adenylation domain acear_RS10455 PF03120 NAD-dependent DNA ligase OB-fold domain acear_RS10455 PF12826 Helix-hairpin-helix motif acear_RS10455 PF00533 BRCA1 C Terminus (BRCT) domain acear_RS10460 PF13361 UvrD-like helicase C-terminal domain acear_RS10460 PF00580 UvrD/REP helicase N-terminal domain acear_RS10475 PF13367 PrsW family intramembrane metalloprotease acear_RS10490 PF00899 ThiF family acear_RS10495 PF03180 NLPA lipoprotein acear_RS10500 PF00528 Binding-protein-dependent transport system inner membrane component acear_RS10505 PF00005 ABC transporter acear_RS10505 PF09383 NIL domain acear_RS10515 PF01371 Trp repressor protein acear_RS10520 PF00994 Probable molybdopterin binding domain acear_RS10525 PF01967 MoaC family acear_RS10530 PF06463 Molybdenum Cofactor Synthesis C acear_RS10530 PF04055 Radical SAM superfamily acear_RS10535 PF03453 MoeA N-terminal region (domain I and II) acear_RS10535 PF00994 Probable molybdopterin binding domain acear_RS10535 PF03454 MoeA C-terminal region (domain IV) acear_RS10540 PF03453 MoeA N-terminal region (domain I and II) acear_RS10540 PF03454 MoeA C-terminal region (domain IV) acear_RS10540 PF00994 Probable molybdopterin binding domain acear_RS10550 PF00860 Permease family acear_RS10555 PF00117 Glutamine amidotransferase class-I acear_RS10555 PF00958 GMP synthase C terminal domain acear_RS10555 PF02540 NAD synthase acear_RS10560 PF17200 Single Cache domain 2 acear_RS10560 PF00672 HAMP domain acear_RS10560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain acear_RS10565 PF01593 Flavin containing amine oxidoreductase acear_RS10580 PF03323 Bacillus/Clostridium GerA spore germination protein acear_RS10585 PF00118 TCP-1/cpn60 chaperonin family acear_RS10590 PF00166 Chaperonin 10 Kd subunit acear_RS10600 PF05167 Uncharacterised ACR (DUF711) acear_RS10610 PF00814 Glycoprotease family acear_RS10620 PF00814 Glycoprotease family acear_RS10625 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE acear_RS10640 PF07687 Peptidase dimerisation domain acear_RS10640 PF01546 Peptidase family M20/M25/M40 acear_RS10645 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system acear_RS10665 PF00571 CBS domain acear_RS10670 PF03853 YjeF-related protein N-terminus acear_RS10670 PF01256 Carbohydrate kinase acear_RS10675 PF01648 4'-phosphopantetheinyl transferase superfamily acear_RS10680 PF00672 HAMP domain acear_RS10680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain acear_RS10685 PF01348 Type II intron maturase acear_RS10685 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) acear_RS10690 PF01380 SIS domain acear_RS10695 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I acear_RS10695 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II acear_RS10695 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III acear_RS10695 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain acear_RS10700 PF01557 Fumarylacetoacetate (FAA) hydrolase family acear_RS10705 PF00483 Nucleotidyl transferase acear_RS10715 PF01381 Helix-turn-helix acear_RS10720 PF02719 Polysaccharide biosynthesis protein acear_RS10725 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family acear_RS10730 PF17836 PglD N-terminal domain acear_RS10730 PF00132 Bacterial transferase hexapeptide (six repeats) acear_RS10735 PF02397 Bacterial sugar transferase acear_RS10755 PF01609 Transposase DDE domain acear_RS10800 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family acear_RS10810 PF01408 Oxidoreductase family, NAD-binding Rossmann fold acear_RS10810 PF02894 Oxidoreductase family, C-terminal alpha/beta domain acear_RS10815 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain acear_RS10815 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain acear_RS10815 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain acear_RS10825 PF00009 Elongation factor Tu GTP binding domain acear_RS10830 PF01348 Type II intron maturase acear_RS10830 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) acear_RS10840 PF01507 Phosphoadenosine phosphosulfate reductase family acear_RS10845 PF02397 Bacterial sugar transferase acear_RS10855 PF13614 AAA domain acear_RS10860 PF02706 Chain length determinant protein acear_RS10860 PF13807 G-rich domain on putative tyrosine kinase acear_RS10865 PF10531 SLBB domain acear_RS10875 PF01238 Phosphomannose isomerase type I acear_RS10880 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I acear_RS10880 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain acear_RS10880 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III acear_RS10880 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II acear_RS10885 PF01050 Mannose-6-phosphate isomerase acear_RS10885 PF00483 Nucleotidyl transferase acear_RS10890 PF00535 Glycosyl transferase family 2 acear_RS10915 PF13439 Glycosyltransferase Family 4 acear_RS10915 PF00534 Glycosyl transferases group 1 acear_RS10925 PF13276 HTH-like domain acear_RS10925 PF00665 Integrase core domain acear_RS10925 PF13333 Integrase core domain acear_RS10940 PF13439 Glycosyltransferase Family 4 acear_RS10940 PF00534 Glycosyl transferases group 1 acear_RS10950 PF16363 GDP-mannose 4,6 dehydratase acear_RS10955 PF02397 Bacterial sugar transferase acear_RS10960 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain acear_RS10960 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain acear_RS10960 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain acear_RS10965 PF13439 Glycosyltransferase Family 4 acear_RS10965 PF00534 Glycosyl transferases group 1 acear_RS10975 PF13439 Glycosyltransferase Family 4 acear_RS10975 PF00534 Glycosyl transferases group 1 acear_RS11005 PF00535 Glycosyl transferase family 2 acear_RS11010 PF01075 Glycosyltransferase family 9 (heptosyltransferase) acear_RS11015 PF01075 Glycosyltransferase family 9 (heptosyltransferase) acear_RS11020 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) acear_RS11040 PF00395 S-layer homology domain acear_RS11045 PF03652 Holliday junction resolvase acear_RS11050 PF11283 Protein of unknown function (DUF3084) acear_RS11060 PF00005 ABC transporter acear_RS11060 PF12399 Branched-chain amino acid ATP-binding cassette transporter acear_RS11085 PF01380 SIS domain acear_RS11085 PF00571 CBS domain acear_RS11090 PF00793 DAHP synthetase I family acear_RS11095 PF02348 Cytidylyltransferase acear_RS11100 PF02606 Tetraacyldisaccharide-1-P 4'-kinase acear_RS11110 PF00664 ABC transporter transmembrane region acear_RS11110 PF00005 ABC transporter acear_RS11115 PF02684 Lipid-A-disaccharide synthetase acear_RS11125 PF00132 Bacterial transferase hexapeptide (six repeats) acear_RS11125 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 acear_RS11130 PF07977 FabA-like domain acear_RS11135 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase acear_RS11140 PF00005 ABC transporter acear_RS11155 PF00132 Bacterial transferase hexapeptide (six repeats) acear_RS11155 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD acear_RS11175 PF01103 Surface antigen acear_RS11175 PF07244 Surface antigen variable number repeat acear_RS11195 PF02119 Flagellar P-ring protein acear_RS11200 PF02107 Flagellar L-ring protein acear_RS11210 PF06429 Flagellar basal body rod FlgEFG protein C-terminal acear_RS11210 PF00460 Flagella basal body rod protein acear_RS11215 PF06429 Flagellar basal body rod FlgEFG protein C-terminal acear_RS11215 PF00460 Flagella basal body rod protein acear_RS11220 PF12116 Stage III sporulation protein D acear_RS11230 PF08486 Stage II sporulation protein acear_RS11235 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) acear_RS11240 PF07997 Protein of unknown function (DUF1694) acear_RS11245 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain acear_RS11245 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain acear_RS11250 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain acear_RS11250 PF02874 ATP synthase alpha/beta family, beta-barrel domain acear_RS11255 PF00231 ATP synthase acear_RS11260 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain acear_RS11260 PF00306 ATP synthase alpha/beta chain, C terminal domain acear_RS11260 PF02874 ATP synthase alpha/beta family, beta-barrel domain acear_RS11265 PF00213 ATP synthase delta (OSCP) subunit acear_RS11270 PF00430 ATP synthase B/B' CF(0) acear_RS11275 PF00137 ATP synthase subunit C acear_RS11280 PF00137 ATP synthase subunit C acear_RS11285 PF00119 ATP synthase A chain acear_RS11300 PF02350 UDP-N-acetylglucosamine 2-epimerase acear_RS11305 PF00953 Glycosyl transferase family 4 acear_RS11320 PF00464 Serine hydroxymethyltransferase acear_RS11325 PF02502 Ribose/Galactose Isomerase acear_RS11330 PF01451 Low molecular weight phosphotyrosine protein phosphatase acear_RS11335 PF01300 Telomere recombination acear_RS11335 PF03481 Putative GTP-binding controlling metal-binding acear_RS11340 PF17827 PrmC N-terminal domain acear_RS11340 PF05175 Methyltransferase small domain acear_RS11345 PF00472 RF-1 domain acear_RS11345 PF03462 PCRF domain acear_RS11350 PF07136 Protein of unknown function (DUF1385) acear_RS11355 PF01197 Ribosomal protein L31 acear_RS11360 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain acear_RS11360 PF07497 Rho termination factor, RNA-binding domain acear_RS11360 PF07498 Rho termination factor, N-terminal domain acear_RS11365 PF01116 Fructose-bisphosphate aldolase class-II acear_RS11380 PF00117 Glutamine amidotransferase class-I acear_RS11380 PF06418 CTP synthase N-terminus acear_RS11385 PF03485 Arginyl tRNA synthetase N terminal domain acear_RS11385 PF05746 DALR anticodon binding domain acear_RS11385 PF00750 tRNA synthetases class I (R) acear_RS11395 PF04284 Protein of unknown function (DUF441) acear_RS11405 PF01869 BadF/BadG/BcrA/BcrD ATPase family acear_RS11420 PF00120 Glutamine synthetase, catalytic domain acear_RS11420 PF03951 Glutamine synthetase, beta-Grasp domain acear_RS11425 PF02540 NAD synthase acear_RS11430 PF00557 Metallopeptidase family M24 acear_RS11430 PF01321 Creatinase/Prolidase N-terminal domain acear_RS11435 PF00072 Response regulator receiver domain acear_RS11435 PF12833 Helix-turn-helix domain acear_RS11440 PF07694 5TMR of 5TMR-LYT acear_RS11440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase acear_RS11440 PF06580 Histidine kinase acear_RS11445 PF02590 Predicted SPOUT methyltransferase acear_RS11450 PF13180 PDZ domain acear_RS11455 PF00753 Metallo-beta-lactamase superfamily acear_RS11460 PF01739 CheR methyltransferase, SAM binding domain acear_RS11460 PF03705 CheR methyltransferase, all-alpha domain acear_RS11465 PF16360 GTP-binding GTPase Middle Region acear_RS11465 PF13167 GTP-binding GTPase N-terminal acear_RS11465 PF01926 50S ribosome-binding GTPase acear_RS11475 PF12706 Beta-lactamase superfamily domain acear_RS11480 PF04069 Substrate binding domain of ABC-type glycine betaine transport system acear_RS11485 PF02540 NAD synthase acear_RS11490 PF01699 Sodium/calcium exchanger protein acear_RS11500 PF00440 Bacterial regulatory proteins, tetR family acear_RS11505 PF02504 Fatty acid synthesis protein acear_RS11510 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III acear_RS11515 PF00085 Thioredoxin acear_RS11520 PF07992 Pyridine nucleotide-disulphide oxidoreductase acear_RS11525 PF02028 BCCT, betaine/carnitine/choline family transporter acear_RS11530 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) acear_RS11535 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) acear_RS11540 PF09338 Glycine/sarcosine/betaine reductase component B subunits acear_RS11545 PF04723 Glycine reductase complex selenoprotein A acear_RS11550 PF04723 Glycine reductase complex selenoprotein A acear_RS11555 PF07992 Pyridine nucleotide-disulphide oxidoreductase acear_RS11560 PF02028 BCCT, betaine/carnitine/choline family transporter acear_RS11565 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) acear_RS11570 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) acear_RS11575 PF09338 Glycine/sarcosine/betaine reductase component B subunits acear_RS11580 PF04723 Glycine reductase complex selenoprotein A acear_RS11585 PF04723 Glycine reductase complex selenoprotein A acear_RS11590 PF09105 Elongation factor SelB, winged helix acear_RS11590 PF00009 Elongation factor Tu GTP binding domain acear_RS11590 PF09106 Elongation factor SelB, winged helix acear_RS11590 PF03144 Elongation factor Tu domain 2 acear_RS11590 PF09107 Elongation factor SelB, winged helix acear_RS11595 PF12390 Selenocysteine synthase N terminal acear_RS11595 PF03841 L-seryl-tRNA selenium transferase acear_RS11600 PF01869 BadF/BadG/BcrA/BcrD ATPase family acear_RS11605 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component acear_RS11610 PF00155 Aminotransferase class I and II acear_RS11615 PF00005 ABC transporter acear_RS11620 PF00528 Binding-protein-dependent transport system inner membrane component acear_RS11625 PF00497 Bacterial extracellular solute-binding proteins, family 3 acear_RS11630 PF00581 Rhodanese-like domain acear_RS11660 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component acear_RS11665 PF01869 BadF/BadG/BcrA/BcrD ATPase family acear_RS11670 PF02634 FdhD/NarQ family acear_RS11675 PF00384 Molybdopterin oxidoreductase acear_RS11675 PF01568 Molydopterin dinucleotide binding domain acear_RS11675 PF04879 Molybdopterin oxidoreductase Fe4S4 domain acear_RS11680 PF12838 4Fe-4S dicluster domain acear_RS11680 PF04879 Molybdopterin oxidoreductase Fe4S4 domain acear_RS11680 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region acear_RS11680 PF00384 Molybdopterin oxidoreductase acear_RS11680 PF01568 Molydopterin dinucleotide binding domain acear_RS11685 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal acear_RS11685 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region acear_RS11685 PF00384 Molybdopterin oxidoreductase acear_RS11690 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit acear_RS11690 PF00037 4Fe-4S binding domain acear_RS11690 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region acear_RS11705 PF02629 CoA binding domain acear_RS11705 PF06971 Putative DNA-binding protein N-terminus acear_RS11710 PF01790 Prolipoprotein diacylglyceryl transferase acear_RS11720 PF01063 Amino-transferase class IV acear_RS11725 PF00117 Glutamine amidotransferase class-I acear_RS11730 PF00425 chorismate binding enzyme acear_RS11730 PF04715 Anthranilate synthase component I, N terminal region acear_RS11735 PF02142 MGS-like domain acear_RS11735 PF01808 AICARFT/IMPCHase bienzyme acear_RS11740 PF00551 Formyl transferase acear_RS11745 PF00586 AIR synthase related protein, N-terminal domain acear_RS11745 PF02769 AIR synthase related protein, C-terminal domain acear_RS11750 PF00156 Phosphoribosyl transferase domain acear_RS11755 PF00586 AIR synthase related protein, N-terminal domain acear_RS11755 PF02769 AIR synthase related protein, C-terminal domain acear_RS11755 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain acear_RS11765 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase acear_RS11770 PF01259 SAICAR synthetase acear_RS11775 PF00206 Lyase acear_RS11775 PF10397 Adenylosuccinate lyase C-terminus acear_RS11780 PF01734 Patatin-like phospholipase acear_RS11785 PF00731 AIR carboxylase acear_RS11790 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain acear_RS11790 PF02222 ATP-grasp domain acear_RS11795 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain acear_RS11795 PF02844 Phosphoribosylglycinamide synthetase, N domain acear_RS11795 PF02843 Phosphoribosylglycinamide synthetase, C domain acear_RS11800 PF00709 Adenylosuccinate synthetase acear_RS11805 PF00206 Lyase acear_RS11805 PF10397 Adenylosuccinate lyase C-terminus acear_RS11810 PF03796 DnaB-like helicase C terminal domain acear_RS11810 PF00772 DnaB-like helicase N terminal domain acear_RS11820 PF03948 Ribosomal protein L9, C-terminal domain acear_RS11820 PF01281 Ribosomal protein L9, N-terminal domain acear_RS11825 PF09991 Predicted membrane protein (DUF2232) acear_RS11835 PF01084 Ribosomal protein S18 acear_RS11840 PF00436 Single-strand binding protein family acear_RS11845 PF01250 Ribosomal protein S6 acear_RS11850 PF01926 50S ribosome-binding GTPase acear_RS11850 PF06071 Protein of unknown function (DUF933) acear_RS11855 PF06107 Bacterial protein of unknown function (DUF951) acear_RS11865 PF06866 Protein of unknown function (DUF1256) acear_RS11875 PF04474 Protein of unknown function (DUF554) acear_RS11880 PF00266 Aminotransferase class-V acear_RS11885 PF10396 GTP-binding protein TrmE N-terminus acear_RS11885 PF12631 MnmE helical domain acear_RS11885 PF01926 50S ribosome-binding GTPase acear_RS11900 PF02195 ParB-like nuclease domain acear_RS11900 PF17762 HTH domain found in ParB protein acear_RS11905 PF13614 AAA domain acear_RS11910 PF17762 HTH domain found in ParB protein acear_RS11910 PF02195 ParB-like nuclease domain acear_RS11920 PF02527 rRNA small subunit methyltransferase G acear_RS11925 PF01134 Glucose inhibited division protein A acear_RS11925 PF13932 GidA associated domain acear_RS11930 PF13932 GidA associated domain acear_RS11930 PF01134 Glucose inhibited division protein A acear_RS11935 PF10396 GTP-binding protein TrmE N-terminus acear_RS11935 PF01926 50S ribosome-binding GTPase acear_RS11935 PF12631 MnmE helical domain acear_RS11940 PF14804 Jag N-terminus acear_RS11940 PF01424 R3H domain acear_RS11945 PF02096 60Kd inner membrane protein acear_RS11950 PF01809 Putative membrane protein insertion efficiency factor acear_RS11955 PF00825 Ribonuclease P acear_RS11970 PF00188 Cysteine-rich secretory protein family acear_RS11980 PF04294 VanW like protein acear_RS11990 PF06429 Flagellar basal body rod FlgEFG protein C-terminal acear_RS11990 PF07196 Flagellin hook IN motif acear_RS12000 PF00669 Bacterial flagellin N-terminal helical region acear_RS12000 PF00700 Bacterial flagellin C-terminal helical region acear_RS12020 PF04205 FMN-binding domain acear_RS12030 PF00877 NlpC/P60 family acear_RS12030 PF01476 LysM domain acear_RS12045 PF03775 Septum formation inhibitor MinC, C-terminal domain acear_RS12075 PF13456 Reverse transcriptase-like acear_RS12100 PF00128 Alpha amylase, catalytic domain acear_RS12100 PF02903 Alpha amylase, N-terminal ig-like domain acear_RS12100 PF16657 Maltogenic Amylase, C-terminal domain acear_RS12105 PF12706 Beta-lactamase superfamily domain acear_RS12130 PF00072 Response regulator receiver domain acear_RS12130 PF13426 PAS domain acear_RS12130 PF08448 PAS fold acear_RS12130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase acear_RS12130 PF00512 His Kinase A (phospho-acceptor) domain acear_RS12140 PF01551 Peptidase family M23 acear_RS12140 PF08525 Opacity-associated protein A N-terminal motif acear_RS12140 PF01476 LysM domain acear_RS12155 PF07992 Pyridine nucleotide-disulphide oxidoreductase acear_RS12155 PF00724 NADH:flavin oxidoreductase / NADH oxidase family acear_RS12160 PF00724 NADH:flavin oxidoreductase / NADH oxidase family acear_RS12160 PF07992 Pyridine nucleotide-disulphide oxidoreductase acear_RS12185 PF13464 Domain of unknown function (DUF4115) acear_RS12190 PF06725 3D domain acear_RS12190 PF01476 LysM domain acear_RS12195 PF01520 N-acetylmuramoyl-L-alanine amidase acear_RS12205 PF04122 Putative cell wall binding repeat 2 acear_RS12205 PF01520 N-acetylmuramoyl-L-alanine amidase acear_RS12210 PF00072 Response regulator receiver domain acear_RS12215 PF00440 Bacterial regulatory proteins, tetR family acear_RS12230 PF00535 Glycosyl transferase family 2