APT56_RS00090 NONE
APT56_RS00095 NONE
APT56_RS00100 NONE
APT56_RS00105   21865 ..   21890 +  -4.5  -3.04263   ATCGGGCGCGCTGCC         GACGGGCTGGC TGCC GCCGGCCTGGA          TCTTGGCGATGACGT  46 126
APT56_RS00130   27769 ..   27784 +    -9  -4.11404   GCCTGTTCCAGCAAT              GCGAGT GAAA ACTCGC               TTTGTGTCGTGTGGG  75 440
APT56_RS00175   38868 ..   38884 + -10.8  -5.23292   TCGGTTCAAGACAAA              GCGCCC TGCCC GGGCGC              TTTTGTTTTGTATCG 100 48
APT56_RS00205   46480 ..   46493 +  -6.7  -4.16016   AGTTTTTTAAATAAG               TGAGC TATT GCTCA                TTTATTCCGAGCTGA  68 261
APT56_RS00220 NONE
APT56_RS00225 NONE
APT56_RS00230 NONE
APT56_RS00235 NONE
APT56_RS00240   54031 ..   54042 +  -4.4   -3.0955   AATTTTCCGATACGC                TGTC ATAC GACA                 TCCTTTCTCTCGTTT  45 86
APT56_RS00245   55363 ..   55382 + -16.4  -5.03994   CCATGCCGCCCCAAG            CCGCCCGG CTCT CCGGGCGG             TTTTTCTATATGACG 100 83
APT56_RS00250   56470 ..   56482 +  -3.3  -3.18118   GACTTATCCACAAGG                AACGC CAT GCGTC                TGTCTTCTCAACTGC  45 51
APT56_RS00255 NONE
APT56_RS00260   58079 ..   58097 +    -6  -3.72576   GCCTTGCGGAAGTGT             TCCAGC TGGCGGC GCTGGA             TTTCCTCGGGCACGC  61 394
APT56_RS00285 NONE
APT56_RS00290   65389 ..   65402 +  -9.5   -3.9243   GGCCCGCCGGCGGTC               CGGCC GCCA GGCCG                TTCTTTAAAGCGTTA  73 81
        gyrB   67929 ..   67949 +   -14  -5.63517   GGCATGCATGAAATA            GGGGCTGC CTTGC GCAGCCCC            TTTTTTATTTGCCGG 100 78
APT56_RS00305   69931 ..   69968 + -22.7  -2.81888   GCCAAGTAAGCCGCC   TGCCGGGCCGGCGGTGGC GCT GCC-CCTCCGGCCCGGCG   TGATTCCCTTTCGAA 100 32
APT56_RS00310 NONE
APT56_RS00315 NONE
APT56_RS00320 NONE
APT56_RS00325 NONE
APT56_RS00330   75184 ..   75201 + -14.1  -3.60151   CCGTGGGCAAAAAAA             GGCCCCG ATTC CGGGGCC              TTGTCGTTTCCAGGC  84 51
APT56_RS00340   77299 ..   77319 + -15.4  -3.64905   GCGCCGCGCGACCCG            GGGCGCCG CCCGC CGGCGCCC            TCTTCTTTGGTTGTC  90 78
APT56_RS00345 NONE
APT56_RS00350   78792 ..   78808 +  -3.6  -2.57564   AAGCGCGTGCGGGTG              CTGCGC TAGGC GCCCAG              GTTATCCACAGGTCC  39 17
        artP NONE
APT56_RS00360   80645 ..   80657 +  -6.9  -4.56597   AAGGTGCTGGCAAGC                CGCTG AAT CGGCG                TTTTTCGGGGGCGGC  79 20
APT56_RS00365   81606 ..   81616 +  -8.2  -3.21912   CGCTGATCCCGCCGC                 GCGC ATT GCGC                 TTCGTCGATTCGGCG  59 35
APT56_RS00375   83127 ..   83168 +   -18  -2.78384   TCGGCCGCGACGTAG GGGGCACGGGGCCGGCAAG GGACG CTTGCCGGCCCCG-GCGCG TATACTGGGCGGCGC  87 63
        lldD   84483 ..   84513 + -13.2  -6.17669   TCTGATCGGCTGGAA       GCCGGTGGGTCGCG GAT TGCGGCTTGCCGGC       TTTTTTTGTTTTCTT 100 48
APT56_RS00390 NONE
APT56_RS00395 NONE
APT56_RS00400 NONE
APT56_RS00405 NONE
APT56_RS00410 NONE
APT56_RS00415 NONE
APT56_RS00420 NONE
APT56_RS00425 NONE
APT56_RS00430   95325 ..   95335 +  -4.6  -3.16564   GCCCCATCAGGATGC                 GGTC GAT GGCC                 TTGCTGAAGTAGCGC  47 379
APT56_RS00440   97101 ..   97116 +    -6  -4.54026   GCATCAAGCTGGACT              GAGCGC CGCC GCGCCC               TTCTTTTCTTTCAGG  76 24
APT56_RS00445 NONE
APT56_RS00450  101273 ..  101311 + -15.3  -2.51173   GTTGATGTGCAGCCA  CGGCTGGCCG-G-GCTCGG CGC CCAGGCTCTCGGCCAGCCG  CTTGGTGAGCTTGAT  69 366
APT56_RS00460 NONE
APT56_RS00465 NONE
APT56_RS00470 NONE
APT56_RS00475 NONE
APT56_RS00480 NONE
APT56_RS00485 NONE
APT56_RS00490 NONE
APT56_RS00495 NONE
APT56_RS00500  110212 ..  110235 + -16.8  -3.60627   CTGATCGGCCACAAC          GATCCGGCAG TGTG CTGCCGGATC           TTTCCCGTGGCGTCC  91 37
APT56_RS00505 NONE
APT56_RS00510  123860 ..  123876 +  -6.5  -3.27622   GAAGAGCTGGTTACT              TCAACGC TAG GCGTCGA              TCTTCGTGATTTTTT  54 158
APT56_RS00515 NONE
APT56_RS00520  125966 ..  125989 +    -3  -2.57344   CCAAGATCAAGGAAA          TTGCGCCGTT ACTT GGCGGCGAAG           GTTCTGCCGGACATG  39 354
APT56_RS00525  127439 ..  127451 +  -3.4  -3.31461   GTTGGCCATGGCCGC                GTAG CGTTC CTAC                TTCTGGCAATAGCTA  47 103
APT56_RS00555  136443 ..  136463 + -13.9  -2.74563   AGCCGGTCGCAGGTC            ACGCGGGCG CTC CGCCCGCGA            TCGTTCCCCTCTACC  71 67
APT56_RS00560  137557 ..  137569 +  -4.7  -2.79098   CGCCGCGGCCTGACC                GCGCG GCC CGGGC                TCATTCGTGCATGGA  45 28
APT56_RS00565  138358 ..  138391 + -21.1  -4.56597   TCCCCCCGGATCGCC     TGACGCGGCTCCTTG GACC CAAGGGGCCGCGTCG      TTTTTCAGGCGAAAG 100 52
APT56_RS00570 NONE
APT56_RS00575 NONE
APT56_RS00580  140094 ..  140111 + -14.1  -2.52543   TCATCCCCGGCTTCA             GGCCGCG CCGG CGCGGCC              TGGCTTGCGGGCCGT  70 72
APT56_RS00590  142176 ..  142195 +    -7  -2.54276   CGACGCCGACGGTTG            GCGAGGCT GCCA GGCCGCGC             GTATTGATTGAGGGT  47 71
APT56_RS00605  145486 ..  145496 +  -4.6  -3.65812   TGGCGCGTGTCTGGG                 CGCG GGA TGCG                 TTGTCTTGACCGGCC  55 77
APT56_RS00615  148010 ..  148036 + -15.8  -4.56597   GGACCGCCGGAATGA         TGCAGGGGCCCG TTG CGGGCCCCTTCG         TTTTTGCCGCACGGC 100 79
APT56_RS00645  157287 ..  157337 + -13.3  -2.70298   GCCCAGCGCGCGCCA GGCGCCTT-G-CAGCGACGCCAGCG GCG CGCTCGTGTCGATGGCCGGGGCGCC GTTCTGCTTGGACAG  67 258
APT56_RS00670  163356 ..  163391 +  -7.4  -3.14132   CGTCATCCCCAGGAA    CTG-CCGCAGCTCCGGC GTC GCCGGCGCCGTGAACAG    TTCCTCGGGCGGCCC  53 89
        argD  168800 ..  168857 +  -8.6  -4.88918   CGCTTGATCACCGAT TTGTAGTTAG-AT-GAAACAAGGGCCGC CCTC GCGGCCCTTGTTTCTGTTCAAACGACCG TTTTGTTTGGCATCA 100 34
APT56_RS00705  171983 ..  171995 +  -2.6   -3.7956   GCCGTGGCGAAACGC                GTGC AACAA GCGC                TTATTCCATTGTTTC  53 232
APT56_RS00710 NONE
APT56_RS00715 NONE
APT56_RS00720  181236 ..  181257 +  -2.1  -4.07568   CAAATTGGTCCGCTT           AGCTGGCGC TTAT GTGACAGCA            TTTTGGCCAGCCAGC  58 234
APT56_RS00725  183271 ..  183326 + -14.7  -3.24747   CCCCGGCGCGTTCCA GCGGCACCACGGC-CAGCCG-CG-CGCT GTT GGCGGCGACGGCGGCGCCGTGGTCGCGC TTGATCATGTGCAGG  77 511
APT56_RS00735 NONE
APT56_RS00740  184752 ..  184777 +  -5.9  -3.09492   TTCTAAGGGCGATGT         ACCGCGCGCCG CACG CGACGCGCCGC          TATTGCCCTTCCCAG  49 35
APT56_RS00750  186069 ..  186094 +  -3.2  -3.14132   TCGCGAAACGCGCAA         TTGCCGATCGC AGATA GCGC-CGGCGA         TTCGTCGCGGGCAAA  43 231
APT56_RS00755  195090 ..  195121 +  -5.2  -3.92373   AAGGGGGGGATGGTT      TTGTTTGCAAGCCA AATT TTGTTTGCAAACCA       TTTATCGATGAAATC  60 426
APT56_RS00765  198703 ..  198717 +  -2.1  -3.57144   AGCGCCCGCGCTTGT              C-CAGG ATTA CCTGCG               TTTGCGGATCGCGCC  50 248
APT56_RS00800 NONE
APT56_RS00805  205651 ..  205669 +  -2.3  -3.57144   GCGTCGTGGCCCTTG             CCGGGTC AGGCC GGTTCGG             TTTCCGGATGCAGCG  50 55
APT56_RS00840  216851 ..  216863 +  -4.7  -2.62977   CCAGGCCAGACCGTC                CGCCG CCA CGACG                AGTTTTCCTTTTGCC  43 49
APT56_RS00845  217946 ..  217967 + -17.3  -5.88471   GCGGCCCGATACAAA           GCGCGCTCC TTGC GGAGCGCGC            TTTTTTTTAATGGTG 100 67
APT56_RS00850  219888 ..  219911 +  -5.2  -3.14211   TCAGGCTCGTTGCTG          CGCCAGCAGCT CGC GGCA-CTGGCG          TTCCTGCACCGCGAT  47 482
APT56_RS00865  221864 ..  221893 +  -2.6  -3.53811   CAGGATCTGCCACGC       CAGGTAGGCGAG ATACGC CGCGCCCGCCAG        TTTCAGCGCCGTGAA  50 492
APT56_RS00875  222911 ..  222929 +  -7.3  -2.53012   ACTGACACGGGCCGG             GGGCGCG ACAGC CGCGCGC             GTTCCTGCTACGGTT  50 36
APT56_RS00880  224313 ..  224328 +  -8.2  -3.28447   CACGCGCCGATGCGC              GCGGCG ATGT CGTCGC               TGTTGTCGTCCATCA  59 164
APT56_RS00910  230398 ..  230422 + -13.5  -5.09225   CTGGTAAGCCAATGT          CGCCGGACGGA CAA TCTGCCCGGCG          TTTTTTGCCTACCCT 100 34
APT56_RS00915  230812 ..  230832 + -18.3  -4.54727   CTGGGCCAACGAAAA            GACCCCGCG CTG CGCGGGGTC            TTTTGCTTTCCAGGG 100 49
APT56_RS00950  238596 ..  238616 + -11.1  -4.55295   GCGCAAAAGAAGAAA            GCCCGCC GGATAAA GGCGGGC            TTTGTTTGTGCGGAG  91 81
APT56_RS00970  244168 ..  244199 +  -9.6  -3.55622   TGCCGCGCGATGAAA      TAAGGGACGTTTCT TCGC AAAAATGTCCCTTA       TTTCAACAAGTTAGA  65 28
APT56_RS00975  244587 ..  244614 + -17.1  -3.87979   CGTCGCCACCTGCCA        CGGCTTGCAGG CCCAGC CCTGCAAGCCG         TTGTGTTTCCGTTTC 100 45
APT56_RS00985  246804 ..  246817 +  -9.5  -2.51547   CGCCAAGGCTAGTCG               CGGCC CCGC GGCCG                ATGTTAGTCTGCCGG  55 345
APT56_RS00990  247406 ..  247425 +   -15  -4.72007   GGCCCGGCATGAAAA            TGGCGCCC CTCG GGGCGCCA             TTTCTTTTGGTGACC 100 47
APT56_RS01015  253921 ..  253952 + -19.4  -4.72272   TGCCGGCGCCCAATG      CGGGCTGCGGCGCC ATCG GGCGTGGCAGCCCG       TTTTTCATGCGCGGC 100 71
APT56_RS01020  255823 ..  255845 +  -6.9  -4.08216   GGATCGATTCGCGAT          GGCGCTGCTC CACC GCGC-GCGCC           TTTTCCACGGCATAG  66 385
APT56_RS01065  267361 ..  267379 + -12.4  -3.15861   CGCCTGCATGTCGAG             CGGCGTGT ACG GCACGCCG             TTGCTGCCGATAGTG  68 152
APT56_RS01095  272341 ..  272354 +  -9.5  -5.94713   GGAAACGCAAAAAAA               CGGCC GAAT GGCCG                TTTTTTTTGTCGGCT 100 86
        mscL  280817 ..  280832 + -11.8   -5.5604   GAGGTGAATGGAAGA              GCGCCC TGTG GGGCGC               TTTTTTATTGGTTCA 100 39
APT56_RS01160  283743 ..  283755 +  -4.8  -3.89346   TCGCCACCGGACAAG                CGGA AACGG TCCG                TTTATGCAATGACAA  60 500
APT56_RS01295  304607 ..  304657 +  -3.3  -3.61398   AGCGTGAAGCTGGGG C-GCACGTTG-TTGTTGGCGTCG AGCTTGA CGGTGCCATCGAGCACCGTGCCG TTGTTGGACGCGGGG  51 485
APT56_RS01310  306864 ..  306874 +  -8.2  -2.82516   CGGCATCCGCATCGC                 GCCG CCG CGGC                 TGTCCTGATCCGCCC  55 7
APT56_RS01315  307165 ..  307176 +  -4.4  -2.66274   GGATCGAGGGCTGAG                GCAT GGGC ATGC                 ATTCCTTCTACCGGC  42 27
APT56_RS01320 NONE
APT56_RS01325 NONE
APT56_RS01330  310463 ..  310488 +  -6.7  -3.84451   CCCGTTCCGACGGGC         CGGACGGGCGC GCTC GCGCCTGTGCA          TTTGAGTTTCACACG  64 82
APT56_RS01335  312336 ..  312380 +  -6.4  -2.62396   ACTGCGATTCGCTGA TCCAGCCATAGCTGTCCACCGC CTG GCGGTGGAT-G-TCGGGCAGGA TGCTCTGGCCGCCTC  45 464
APT56_RS01365  321691 ..  321722 +   -10  -3.07935   CTATACTGGGCGGCC      TGTCGTGGCAGGCC CGGT GCCCGGCCACGGCG       TTCCCTGCATAGGAT  63 51
APT56_RS01370 NONE
APT56_RS01375  323541 ..  323560 + -16.4  -5.06414   CCGCAAGCATGCAAA            GGGCCGCG AATT CGCGGCCC             TTTTTCTTGCGACGG 100 50
APT56_RS01385  328001 ..  328016 +  -8.2  -3.55622   GCTTCCTCGCCGCAT              TCGCGC AACA GCGCGG               TTTCCAGGGATTCAC  63 343
APT56_RS01395 NONE
APT56_RS01400  331773 ..  331802 +  -8.5  -3.01712   TCGTCATTGCCGTGT       TCGCCTGGACCGTG TTC CGCGGTTC-GGCGC       TGTTGACGGGCAAGG  56 131
APT56_RS01405 NONE
APT56_RS01410  333014 ..  333061 + -23.5  -3.05384   GCCGGCGGCTGGACG GGGCGAGGCTGGCGGGCCGCCGG GAAA CCGGCG-CC-GCGGGCCTCGCCC TTCGCTCGACGGCGG 100 63
APT56_RS01420  334175 ..  334188 +  -2.3  -3.60296   CCTGAACGGCGGCCT               TCCCG ACAA CAGGA                TTTCGAATCAACGTG  50 36
APT56_RS01425  334821 ..  334831 +  -3.2  -2.75298   CTATAACTCGCGCAT                 CGGT TGA ATCG                 GTATTTCGTTGATTT  40 19
APT56_RS01430 NONE
APT56_RS01435 NONE
APT56_RS01440  337426 ..  337440 + -12.8  -4.07568   ACCAGCGGCCGGGGG               CCGCGC CCG GCGCGG               TTTTCAGGCGCCGCC  89 41
APT56_RS01450  338455 ..  338486 +    -5  -4.18401   TGGAGAATAATCAGC      TGCTGCCGGGATGAC CGT GCCGGC-CGGCAGCG      TTTTGGGATCTATGG  64 12
APT56_RS01455  339268 ..  339288 + -12.5  -2.95081   GCCGCCAAGAACAGC            GGGCCTGCC GAC GGCAAGCCC            TGATATTTTCAATCC  68 2
        glmU NONE
APT56_RS01465  342116 ..  342155 + -11.2  -3.54475   GCTGCGGGCGCCCTA  GCGCGTAGCGGCCGCCGCG CGC CG-GGCGGCCGGCCCGCCC  TTCTATAATGGCCAC  72 25
APT56_RS01470 NONE
APT56_RS01475  345018 ..  345047 +  -4.9  -3.44051   GGCGAGGCGTGCACG       CGCGC-GGCCAGCT CCT GGTTGGTCAGCGAG       TTGTCGTCCTGCAGC  52 435
APT56_RS01485  347127 ..  347147 + -16.1  -3.75153   CGCGGCGAGGGCGTG            GGGCCGCCG CCG TGGCGGCCC            TTTCCATTGCCGGGC  90 44
APT56_RS01500 NONE
APT56_RS01505  350967 ..  351022 +  -6.1  -3.75665   GGAACTCTCGAACTG ACTCCGAGGCGGAAATGGCCGTCGCAAG CGG TTTGCGGCGGCCAG--CCTCC-CGGGGC TTTCCTGGGCTCTCG  60 25
APT56_RS01510  351584 ..  351623 + -32.3  -4.58308   GGCCTGAGCGCTTGC  CGCCACGGGGCTCGCGC CGATCC GCGCGAGCCCCGTGGCG   TTTCTTTGATTGATA 100 34
APT56_RS01515  353480 ..  353521 + -10.1  -2.83271   AGATATACCTGGTAA GGCTCGCGCAGTTGCGCGTC GAC GACGCGGAA-TGCGCCGGCG TCCTTGTCGAGATAG  57 397
APT56_RS01530  355892 ..  355905 +  -9.5  -2.50113   GCACATGGCGGGACA               GCGCC GGCC GGCGC                CTTGCTAGCATCCTC  55 90
APT56_RS01535  356878 ..  356912 +  -7.1  -3.53012   CAAGCCCGGCGGCGG    GCCGGGGCGGTCCA CGTTGAAA TGGGC-GCCGCGGC     TTTCACGCCGCGCGC  58 51
APT56_RS01555  362179 ..  362215 +  -3.8  -4.52857   CCGGTTTGCGACAAG   TGACAAGGGCCGTTGCCA GAA TGGCAG-GTTCCTTG-CA   TTTTGTGTGGAAAGT  71 74
APT56_RS01560  363516 ..  363527 +  -7.2  -3.14344   GGGATGTCCAGGCTG                CGGC CGAT GCCG                 TTGATGGCGCGGATG  53 177
APT56_RS01585 NONE
APT56_RS01590 NONE
APT56_RS01620  380246 ..  380280 + -21.5   -2.9155   TGCGGCCCGGCCGCC    GTCGCCGTCC-CGCGC CCTG GCGCGTGGACGGCGGC     TGTCGTATTCCGACG 100 97
APT56_RS01625 NONE
APT56_RS01630  382427 ..  382485 +  -3.8  -3.86346   ATGCCTTGCCTAGAC TGCTTCTGTACGC-CGG--CCGCGC-CCCT GTG AGGGTGCGCGGGTCCGAGCGCGATGGAGCG TTTATGCAGCGATGG  58 65
APT56_RS01635  383137 ..  383186 + -12.7   -3.1855   ACGAACAGCTTGTAG GTGCGGTTCAGGTCCAGCGGCAG CCAG TTGCCGCTGGCGCTGTCCAGCAC TTCGATGTTCGACAC  68 302
APT56_RS01655 NONE
APT56_RS01660  388000 ..  388010 +  -3.2  -3.58726   CTTATCTCGAAATCA                 GTCT CCC GGAC                 TTGTATATACAAGCA  51 85
APT56_RS01665 NONE
APT56_RS01670 NONE
APT56_RS01675 NONE
        proY NONE
APT56_RS01685  395586 ..  395629 +   -10  -3.53012   ACGCTGGCCTGAAGC GGGCG-CACGGCCGCGCCGGC GAC GCCGGCACGGCCGCAACGGCG TTTCAGGCCGACAGC  69 29
APT56_RS01700  399784 ..  399796 +  -9.1  -2.86271   CTATTCGTCCACCGT                CACCG CCA CGGTG                TACTTCTAGTGGCCC  58 4
APT56_RS01705  400613 ..  400665 +  -8.5  -2.74144   CCGTGCTTGCGGGCG CTG-CGCCTGCCGCC-TCGCGCT-CAC ACT GTCCGGCGCGACGGCGGT-GGCGGCGG ATTTGCCCATCCAAC  53 108
APT56_RS01710 NONE
APT56_RS01715  404263 ..  404281 +  -6.6  -3.05844   AGGCCCAGCGAGACG             TTGCCGGC GAT GCCGGAGA             TATTGCGCTGCCAGA  48 370
APT56_RS01740  410247 ..  410282 +  -9.6  -4.18018   GGCTTAGCCGGCCTG    GCCGAC-CGCTGCGC TCTCGCC GCGCTGCGGGGCGGC    TTTTGCCTGCGGGCG  76 310
APT56_RS01750 NONE
APT56_RS01755 NONE
APT56_RS01760 NONE
APT56_RS01765  412875 ..  412893 +    -8  -3.09933   CCAGGAACTTGTCCA             GCTGCTCG CTG CGCGCGGC             TTCGGTGCCTTCGCG  52 335
APT56_RS01780  415973 ..  416004 +  -2.8  -3.53091   CGGGCATTCCGGCCA      GCCCGGCAAAGGAA GGAC TTCCGTGGACGAGC       TTTCGCAGCACGAAT  49 121
APT56_RS01785 NONE
APT56_RS01790 NONE
APT56_RS01795  419211 ..  419231 +  -6.7  -3.53811   CGGTTTCGCACGGCA            CCAGGGCGT GGC GCGCCTCGG            TTTCCAGCCCGTCGA  57 247
APT56_RS01830 NONE
APT56_RS01835 NONE
APT56_RS01840  430111 ..  430131 +  -6.7  -4.51097   ATTTAAGCGGGTGCG            CTGCGCGCT GGT GGCGAGCGG            TTTTCTGGTGGTTCC  79 350
APT56_RS01845  431756 ..  431770 +  -5.6  -2.57132   CGCCTTCTGAGCCGG               CCTGCG CCG CGCACG               ATTCTCCAACGCAAC  45 31
APT56_RS01850 NONE
APT56_RS01855 NONE
APT56_RS01860 NONE
APT56_RS01865  435340 ..  435356 +    -5  -4.25104   GGAACCCGGCCTACC              GGCCGG CCTGA CCCGCC              TTTTCCTCCACGAGA  68 15
APT56_RS01870 NONE
APT56_RS01875 NONE
APT56_RS01880 NONE
APT56_RS01885  438971 ..  438981 +  -2.4  -3.13403   GGACGCAGCGCCCGG                 AGGC CAC GCCA                 TGTTCGTCAACCCCA  42 41
APT56_RS01890  439863 ..  439905 + -10.4  -4.25104   CCGGTCATACAGATA CGGCACCTGCGGCTCGCGG TTTAGT CCACG-GCCGCGGGGGCGG TTTTCCTGGCAAGCG  86 2
APT56_RS01895  440307 ..  440321 +  -2.8  -5.48303   CATCACGCCGCAACC               CATTGG CGC CAAATG               TTTTTTTACGATTGT  93 138
APT56_RS01900 NONE
APT56_RS01905 NONE
APT56_RS01910  443303 ..  443320 + -14.1  -4.35116   CGTCGCCAAAAAAAA             CCGGGCC TCAA GGCCCGG              TTTTCATGTCCGCTC 100 56
APT56_RS01925  446526 ..  446551 +  -7.5  -3.57144   GTGTCTGACATGGCC         CGACGGTGGCAG GTC TTGCC-CCGACG         TTTGGCCGTGGAGCG  63 33
APT56_RS01930 NONE
APT56_RS01935 NONE
APT56_RS01940  450617 ..  450651 + -22.9  -4.62441   CGCCCGATCCCACCG     CACGGCTGCCTCCCC CTGTC GGGGCGGCAGCCGTG     TTTGTTTATCTGGAG 100 96
APT56_RS01945 NONE
APT56_RS01950 NONE
APT56_RS01955 NONE
APT56_RS01960  455162 ..  455204 +  -5.5  -2.53263   ATGGTTCGGATGGGT C-CTGCATTGCAGGTCCGGG CCGC CTCGGCCCTGGAATCCGGCG TAGCTTACCGATCCG  45 74
APT56_RS01965  456764 ..  456779 +    -6   -4.1891   CGATGATGACATTGC              CGCGCC AGTT GGCGAG               TTTCTGTTCGCGGCC  69 439
APT56_RS01980  459522 ..  459542 +  -3.2  -3.61398   TGATAGGCGCCGTCG            CGCGTGAT CACCA ATCGCGGG            TTGTTGAAGCCGAAG  51 288
APT56_RS01995  462915 ..  462928 +  -3.7  -3.74747   GGTCGCCCTGGTTTC               CCAGG TTTC CCAGG                TTTCCTAGCCGTTGG  56 4
APT56_RS02000  463575 ..  463619 +    -4   -4.3534   CGCGCGCCCGTCAGC GCCTGGGCCGCCGCGGCGGGT TGAT GCCCGTGGCCGCG-CCCGTCC TTTTCGTCATTGCCG  69 2
APT56_RS02015  468326 ..  468338 +  -3.3  -3.71848   GCTGGTCTCGAAGGT                GCGCA GGT TGCGG                TTGTTGATGCCCAGC  55 360
APT56_RS02050  474245 ..  474259 +  -4.2  -4.24948   TGACGCGGGGCGCGG               CCATAC GTT GTACGG               TTTTCCATCTGCTCA  66 38
APT56_RS02055 NONE
APT56_RS02060  476761 ..  476775 + -12.8  -3.00298   TCCCGGGACGGAACC               CGCCCG CGG CGGGCG               TGTCTGATTCCCGGA  71 48
APT56_RS02065 NONE
APT56_RS02070  478737 ..  478753 + -11.5   -4.4261   GCGCCTTCGGCTTGC              TGCCCCC CGA GGGGGCG              TTTTCATCTTGAGGC  90 70
APT56_RS02085  481705 ..  481733 +  -7.3  -2.85351   ATCGTGGCCGGGAAC        CAGTTCGCCAGGA ACG TCTCGGCGGCCTG        TGTCATGTCCGGCGC  50 466
APT56_RS02095  483716 ..  483755 + -11.3  -3.30124   GTGCAGGCCCTCGAC  CAGCGCGCCGGCGCT GGAGACGATG GGCGCGGGCGCGCCG   TTGTCCACGGTGGCC  66 477
APT56_RS02105 NONE
APT56_RS02110 NONE
APT56_RS02115 NONE
APT56_RS02120  487624 ..  487634 +  -4.6  -3.36968   GCCGCATCGTTCCTC                 CGCG CAG CGTG                 TTGTCGCGTTGGATG  51 87
APT56_RS02125 NONE
APT56_RS02135  491880 ..  491898 + -13.1   -4.7497   CCCTGTTTTCCCGTG             CGCGCCC TTACC GGGCGCG             TTTTTCATGCCTGCG 100 107
APT56_RS02140  493701 ..  493720 +   -15   -5.7946   CCGGGCAGCACCCCG            GCGGCTCC TTCG GGAGCCGC             TTTTTTTGTTCCGGC 100 78
APT56_RS02145 NONE
APT56_RS02150  495604 ..  495617 +  -2.4  -3.14878   CTCCGGGCCGGCGCT               GGAT AGCAAG ATCC                TCTTGCATTGAGCAG  42 64
APT56_RS02155  496023 ..  496033 +  -8.2  -2.78384   GAGTGCTCCGCGTTG                 CCCG CCC CGGG                 TGTCGTCGGAGCCGC  53 122
APT56_RS02160 NONE
APT56_RS02165 NONE
APT56_RS02170  498671 ..  498702 + -18.8  -2.60688   GCTTTTTAAGAAAGT      GATGGGTTAGGCGC GCAA GCGCCTCACCCATC       CTTATCGGATGGTTG  86 32
APT56_RS02175 NONE
APT56_RS02180 NONE
APT56_RS02185  501587 ..  501601 + -12.8  -6.06723   CCGGATCCGGAAAAA               GCGGCC CTG GGCCGC               TTTTTTTTTCGCGCG 100 65
APT56_RS02190  502585 ..  502595 +  -2.4  -3.05384   GGGGGCCGTCACAAA                 GGCG GCG CGAC                 TTGCGTCCCGGCAAG  42 102
APT56_RS02195  504003 ..  504020 +  -9.1  -2.73364   GTTATCCACAGGTCG             GGTCTGG AGTT CCGGACC              TGGTTGCGGTGACAA  56 270
APT56_RS02200  506238 ..  506248 +  -2.4  -3.25802   GCTGGAAATCTGACA                 GGCG CCG CGCA                 TTCGTCCGTTTACTC  44 28
APT56_RS02205 NONE
APT56_RS02210  509551 ..  509580 + -12.2  -3.28712   ATGCCCGCCGCCAGC      CGCGCCGCCATGGC GTTG GCC-TGGC-GCGCG       TTGTCCAGCCACAGG  70 322
APT56_RS02220  511367 ..  511377 +  -8.2  -3.02043   CTGAATGCCATAGCG                 CGCC GCC GGCG                 TATTGCGCGACAGTT  55 37
APT56_RS02230  513228 ..  513255 + -14.8  -3.05935   CTGACGACGGCGCCG        CGCCGCGGGCCCG CGA CGGGCCCGCC-CG        TTCAGTGCCCGGTGT  80 37
APT56_RS02240  515391 ..  515405 +    -7  -3.33696   CGCCGCTCCATCGGA               CCGGCG TTA CGCCAG               TTCCTTCAACAGCAG  55 104
APT56_RS02290  526838 ..  526857 +   -15  -4.34402   CTCATCCAAAAAAAA            CGGCTGCC CGAA GGCAGCCG             TTTTCATGTCGCGCG 100 73
APT56_RS02310  531378 ..  531402 +  -5.5  -3.90922   GCTTGAGCATGGCCT          TGGTCAGCCGC AGC GCGGCCGGCGG          TTGTTTCGCCAGGCT  60 270
APT56_RS02325 NONE
APT56_RS02330  535140 ..  535161 +  -5.7  -3.53012   AGCATGTAAGCCAAA           GAAGGCTGC CCGC GCAGCCGCC            TTTGGCGGGCCCCGC  55 200
APT56_RS02335 NONE
APT56_RS02340  538379 ..  538400 + -15.9  -5.40072   GGCCCCAAACAAAAA           GCCCCTCGA TGCA TCGAGGGGC            TTTTTTTCGACCGGC 100 47
APT56_RS02350  539664 ..  539687 +  -5.2  -3.53012   CGATTCCTGTCGGGC          GCGCCAACAGC AAC GTTGC-GGCGC          TTTGCGCCCACGCCC  53 20
APT56_RS02355  541176 ..  541188 +  -2.6  -4.78753   CTTTCCGTCCGTATT                GTGG TTCGT CCGC                TTTTCTTCCTGTTCG  74 146
APT56_RS02360  542301 ..  542314 +  -4.5  -3.62522   CGCTTCGCATCCCGC               GGCAG GTAA TTGCC                TTGTTACCGCACTTG  53 17
APT56_RS02365  543840 ..  543867 + -22.8  -5.09762   CCGAAGCGGCATGCG        CGCCGCCGGCAT GCAG ATGCCGGCGGCG         TTTTGTTTGTTGCGC 100 206
APT56_RS02370  545455 ..  545487 + -33.5  -3.75153   GCTCGGCGGTCCATG      CGCCGCCGGCGCCGC GAT GCGGCGCCGGCGGCG      TTTGCGTTGGCGCGG 100 206
APT56_RS02380  547143 ..  547166 + -15.2   -2.9039   ACTGAATTTTCATCC          GCCGCCCGGC GCAG GCCGGGCGCC           TGTCTCAACTCGTCT  77 59
APT56_RS02385 NONE
APT56_RS02390 NONE
APT56_RS02395 NONE
APT56_RS02400 NONE
APT56_RS02405 NONE
APT56_RS02410 NONE
APT56_RS02415 NONE
APT56_RS02420 NONE
APT56_RS02425 NONE
APT56_RS02430  556482 ..  556496 +  -4.2  -3.14132   GCCAATCGCAAGGCC               TGAAGC GGC GCGTCA               TTGCTCGCAGGGGCA  45 23
APT56_RS02435  557647 ..  557691 + -12.2  -2.52543   ATAAGCGCGATGCCT TCCCG---CGCCGGCGGCCGC CCCAGC GCGGCCGCCGGCGCATCCGGA TCCATTCCACACCCT  64 37
APT56_RS02440  558711 ..  558763 + -22.8  -2.98356   CCGCGCCGATCCGCC CGGCCGGGCGTCGCGTCGCA-TGCCC TCC GGGCATTGCGACGCCGGGCC-GGCCG TGTCGTTACTTCTGC 100 70
APT56_RS02460  562734 ..  562747 +  -9.5  -3.04196   CAGGCGCTCGACAAG               CGGCG ATGC CGCCG                TGTATCTCACTTTGA  59 332
APT56_RS02470  563706 ..  563729 + -11.7  -6.34424   CGGCTCCGCCGCCGC          GCGGC-GCCG GTCAA CGGCGGCCGC          TTTTTTTTTTGCCGC 100 49
APT56_RS02475 NONE
APT56_RS02480  569351 ..  569383 +   -14  -3.03124   TCGTCGCGCAGCTTG      CGGCGGCGGTCGCC GGGCA GGCGCACGCCGTCG      TCTTCCAGCATGGCC  69 178
APT56_RS02510 NONE
        metX NONE
APT56_RS02520  577158 ..  577186 +  -9.5  -3.53224   ATGCCGCAAGCCCGC       CGCGCCCGTCCG TGCGCC CGGCCGGGC-CG        TTTCAGGAGACCGTC  65 84
        ampG  578747 ..  578784 +  -6.1  -3.65046   AGCTCTGCTCGGCGG   CGTGGTAGAAGCTGCGG GTCA CCGCATCGTCCGGCACG    TTCTTGCCCTGGAAC  57 323
APT56_RS02535 NONE
APT56_RS02540  581098 ..  581142 + -15.6  -3.55444   CCCTGCACAGTGAAG CACGACGGT-CCGCCACCCGC GTCC GCGGATGGCGGCGCCGACGGG TTTCAGGCGTGCGCG  90 85
APT56_RS02565  585593 ..  585631 +  -9.5  -2.62263   TCAGCGACACGCCCA  GCCCCGCCGCCAGGCG-GC CGA GCACGG-TCGCGGTGGGGC  TGCTGTCGCGCCGCT  55 442
APT56_RS02575  586562 ..  586579 + -14.1  -5.89827   GCGCGCATGAGAAAA             GGCCCGC GCAA GCGGGCC              TTTTTTTTCGTGGTT 100 228
APT56_RS02580 NONE
APT56_RS02585  588230 ..  588248 + -10.2   -3.4214   AAGCGCACCAGCTTC             TCGGCCAC TTC GCGGCCGA             TGTTCTCTTGCGATT  65 380
APT56_RS02635  598261 ..  598279 +   -16  -3.62096   AAGTCGCGCTGAACG             GCCGCACG ATC CGTGCGGC             TTTCCGCTGCTCGGG  90 137
APT56_RS02640  599386 ..  599403 + -14.1  -4.65895   GGCCGTCCGTCCCAA             CCGGCCC CTCA GGGCCGG              TTTTTCCATGCGCGG 100 81
APT56_RS02645 NONE
APT56_RS02650  601832 ..  601855 +  -2.2  -3.26948   GGCCTCTGTGCAGCG          TCGCGCCGGC AAGC GCGTGCGCCA           TTCATCAATTTCTAT  44 136
APT56_RS02655 NONE
APT56_RS02660  603609 ..  603654 + -10.6  -2.82516   CGGCTGGACTTCTCG CCGGC-TT-CCAGC-GCCTGG ATGCGCG CCAGGCCGCTGGTGACGCCGG TGTAGTACTGGCGCG  56 273
APT56_RS02695  615002 ..  615030 + -18.8  -4.87892   TCTCAGTACCCCCCT        GCGCCGCCCCGG CTCGT CCGGCGCGGCGC        TTTGTTTTATTCGGA 100 76
APT56_RS02700 NONE
APT56_RS02705  616808 ..  616820 + -10.5  -3.53091   CGAACAGACCCCGTA                GGCCG CTC CGGCC                TTTCCCCACCCCACT  69 25
APT56_RS02710 NONE
APT56_RS02715 NONE
APT56_RS02720 NONE
APT56_RS02725  620271 ..  620319 +  -7.8  -2.62184   GCCGCAGCGACGGCT GCCACGGCAAC-GGCCGCCGCCC GCAA GGGCGCCGACCAGCCGCCGGTGC TGGTGTACGAGCACG  50 118
APT56_RS02730  621036 ..  621058 +  -2.6  -3.54543   CTCAGCCACCTGGGC           TGGGAAGG CTGAACA CCCTCCCG           TTTCACGGAATCCAT  47 14
APT56_RS02735 NONE
APT56_RS02740  624255 ..  624269 +  -4.2  -3.60098   GCCCGGCACGACCAG               GTCGTC GAA GATGGC               TTTCACGTCGGGGCT  51 444
APT56_RS02750  626593 ..  626628 + -21.2  -3.74077   AGGACCTTGCGGGGT    CGCCAAAGGCGGCCGC GCGG GCGGCCTTCTTTGGCG     TTTGGGTGTCTGGCG 100 299
APT56_RS02760 NONE
APT56_RS02770  633580 ..  633601 +  -8.6  -3.60792   CGGCTGCTGACGCGG           CAGCGGGC TCAGCC GCCCGCGG            TTTCCGGCTTGCGGC  65 31
APT56_RS02790  637754 ..  637810 +    -8  -3.34398   TGCCCGGCATGGCGT CCGCGTGGCGCCATGCCTAGCCCGCCT TCGAGC GGGCG-GC-AGGAGTGG-GCGGCGCGG TCTTTCGGGCCAGCC  58 49
APT56_RS02795  639030 ..  639042 +  -4.8  -3.25823   ACAACAAGCGCATCG                CGCT GGTGG AGCG                TTGATATGAGCAGCA  49 9
APT56_RS02800  640155 ..  640191 + -17.1  -2.60813   CACGCACGATAGAAC    CTTGCCGCGGGCCCGCC ACG GGCGGGCCCGCAACGCG    ATATTTACGGGAGTA  81 29
APT56_RS02805  640988 ..  641009 + -15.9  -4.86731   CGCGACCCGACCAAA           GCCGCCTTC CCTG GAAGGCGGC            TTTTCTTTGGGCGCC 100 61
APT56_RS02810  642310 ..  642338 +   -16    -4.329   GCGGGCGATGCATCC       GC-CGGGGGCCGC GATC GCGGCCCTCGCGC        TTTGTTCCTGTCTTG 100 101
APT56_RS02860 NONE
APT56_RS02865  652458 ..  652472 + -12.8  -2.52464   GGCCGGCAAGGCCGG               CCGCGC CCA GCGCGG               TCGATTCGGGCACCC  62 309
APT56_RS02880 NONE
APT56_RS02885 NONE
APT56_RS02890  657424 ..  657443 +  -2.8  -3.90112   GTCGCCGCCGGCGGC            GG-GGCAGA CTC TCTGCAACC            TTTCATTGCAGAGCC  56 110
APT56_RS02895  657879 ..  657893 +  -7.1  -3.03124   TGTGGGGTAAGTAGG               CGCTC ACATC GAGCG               TGTTCGCCAGTGGCG  50 27
APT56_RS02905 NONE
APT56_RS02910  660545 ..  660571 +  -2.2  -3.35046   CCCCTGAATAATCTC        GGCCCG-CGGG TCGACC TCTGATGGGCC         TGTTTACAAGCGTGA  45 30
APT56_RS02915  661348 ..  661382 +  -7.6  -3.36452   TGATCCATCCGGGCC     TCCGGGCGCGGCAGCC GGC GGCGATCCCGCCCCGA     TTCCTGTTGCGGCCT  58 38
APT56_RS02920  662768 ..  662791 +  -5.1  -3.17051   CGCGCTGATCGGGGG          GCCGCGCCG TGAGCC CGTCGCGCC           TGTTCATCCTGCGGC  47 33
APT56_RS02925 NONE
APT56_RS02930 NONE
APT56_RS02935  670545 ..  670557 +  -4.7  -3.71848   CTCCCGATTGACAAG                CCGGG GCC CCGGG                TTCTTAATGCGGAAA  58 63
APT56_RS02940 NONE
APT56_RS03010 NONE
APT56_RS03015 NONE
APT56_RS03020 NONE
APT56_RS03025  690269 ..  690279 +  -2.4  -3.10715   CGAAACGGCGCCCGC                 GCGC CAG GAGC                 TTGCCTGATGCTCAG  42 7
APT56_RS03030  690999 ..  691024 + -12.5  -4.92385   GCGTGTAGCGCGAAA         GCCGCAGTCCCG GCG CGGG-CGGCGGC         TTTTCTTTCGATATA 100 33
APT56_RS03035 NONE
APT56_RS03040 NONE
APT56_RS03045 NONE
APT56_RS03050 NONE
APT56_RS03055  697898 ..  697913 + -11.8   -4.1466   GGCCCGCCGCAAGCC              GGCCGC GCGG GCGGCC               TTTTGCGGCTTACGT  85 332
APT56_RS03060 NONE
APT56_RS03065 NONE
APT56_RS03070 NONE
APT56_RS03075 NONE
APT56_RS03080 NONE
APT56_RS03085  706141 ..  706160 +  -3.4  -5.04249   GCCGCCGAGTGAGTT            CGGCGGGG GCCA CCCTGGTG             TTTGTTTTTTGAAAA  81 29
APT56_RS03090  706915 ..  706930 + -11.8   -4.1466   GGCCCGCTTCAAGGC              GGCCGC GCGG GCGGCC               TTTTGAAGCTTACGT  85 346
APT56_RS03100 NONE
APT56_RS03105 NONE
APT56_RS03110 NONE
APT56_RS03115 NONE
APT56_RS03120 NONE
APT56_RS03125  714371 ..  714412 +  -6.4   -3.8594   CAGGTCGCGGATCAG CTGGGCCTCTTCCTCGTC CAGCTC GATCAGGTCGCGGCCCAG  TTTGGTGTGGGTGTT  63 303
APT56_RS03135  716989 ..  717021 + -17.7  -3.28712   GGGCGGATGCCACAA      CGCCCTGGCAGCC GCTGTCG GGCCGCCAGGGCG      TTGTGGGGCGAGCGC  91 41
APT56_RS03155  720201 ..  720233 +   -12  -3.49475   GCCTGCCCCGCGCTC     CCGACGGGCCACGCCA GCG TGGCG-GGCCCC-CGG     TTCTATCAGACTACC  75 91
APT56_RS03160 NONE
APT56_RS03165 NONE
APT56_RS03170 NONE
APT56_RS03175  723543 ..  723556 +  -3.7  -3.58343   GGGTGGCCGCCCGGC               CTGGG AGAC CCCTG                TTTGAAGCTGCTGCG  53 7
APT56_RS03180  724595 ..  724630 + -22.6  -2.93382   GGGAATTTGCGGGGC    TGCCCATCGCGGCCGC GCGG GCGGCCACGATGGGCG     TCTGTGCATCTGAAA 100 322
APT56_RS03215  731663 ..  731678 + -11.8   -4.1466   GGCCCGCCGCAAGCC              GGCCGC GCGG GCGGCC               TTTTGCGGCTTACGT  85 332
APT56_RS03285  750213 ..  750226 +  -2.3  -3.63922   GAATTGGCGTAAAAA               GCTGG TTTA TCGGC                TGTTTTGCCAACAAT  50 61
APT56_RS03290 NONE
APT56_RS03295 NONE
APT56_RS03300  752621 ..  752636 + -11.8  -4.77157   GACCAGCGCATAGCA              GGGGGC CTTG GCCCCC               TTTTTACTGCCTTAA 100 39
APT56_RS03305  753629 ..  753639 +  -2.4  -3.05046   CCTGCACGGCCAGAA                 GGCC TGA GTCC                 GTTTTCACCGGATCG  42 19
APT56_RS03310 NONE
APT56_RS03315  756101 ..  756126 + -21.9  -2.71791   CTGCCGGAAAAAACA         GGCTGCGGCGG CACA CCGCCGCAGCC          GTTTCGCAAACGGGT 100 101
APT56_RS03320  756777 ..  756792 + -11.8  -5.52384   TCCAGCCAGCGAAAA              GCCCGC GCGA GCGGGC               TTTTTTTCGTCCGGC 100 53
APT56_RS03325 NONE
APT56_RS03330 NONE
APT56_RS03335 NONE
APT56_RS03340 NONE
APT56_RS03345  761403 ..  761440 +  -9.1  -4.07687   GCGACAGGGAAACCA   TGGAAACGGCCCGGGCAA GGC TTGCC-GGGCCGTCGTCG   TTTTCAGACGCCCAT  76 70
APT56_RS03355  763007 ..  763040 + -13.1  -3.84639   CCATTTCAAATGGCG     CCGGTGGGCAGTCTG ATCA CAGACCGCCTACCGC      TTGTTCTACGTGTTC  86 189
APT56_RS03375  772015 ..  772030 + -11.8  -5.12707   GGGTCGCCAAAAAGC              GGCCGC GCGG GCGGCC               TTTTTTGGCATTTGG 100 339
APT56_RS03390  775286 ..  775300 +  -4.9  -3.54158   TTGCGCAATTGCACA               CGGCG CCGAT CGTCG               TTGATTCTTCACCTG  53 98
APT56_RS03395  776000 ..  776010 +  -6.8  -3.33696   GCTGCGGTAAGGTGC                 GGAC TTC GTCC                 TTCATTGCGCCGCCG  55 116
APT56_RS03400  777283 ..  777309 +   -15  -4.72272   GTGAGGCGAAAAAAA         GCCCCGAACGGC CAG GCCGGGCGGGGC         TTTTTCGTGGACGGA 100 82
APT56_RS03410  781703 ..  781724 +  -8.6  -3.53012   GGATGCAGGGCGAAA           CCCGGCGC ATCGCG GCGCAGGG            TTTCCAGGCGCCGCG  61 428
        pmbA  787706 ..  787759 + -19.6  -4.13767   TCCCGGGTGCGAGCG CGACCTGCGCCCGCCTGCGCGGGGCC TGCG GGCCTCGA-CAGGCGGGCGTT-GTCG TTTTCGCCTCGCGGC 100 41
APT56_RS03450  789162 ..  789188 +  -3.6  -5.00616   TGGCATTCGGCAGGA         GGTGGGGTTTTC GCT GATAACCCCGTG         TTTTTTACAAAAAAA  81 60
APT56_RS03455  790566 ..  790605 + -35.2  -4.91109   CCCGCGCGGGGGGAT  GCGCCTTGCGGACCGCGG CTGG CCGCGGTCCGCAAGGCGC   TTTTTATCGTAGGAC 100 53
APT56_RS03460 NONE
APT56_RS03465  792518 ..  792548 +  -3.8  -2.72461   CGCTGGATGCGTCAA       GGAGGCAAGCGCCA TGC TTGAGCTGACCTCC       GTTTCCAAGAGCTTC  42 5
APT56_RS03470 NONE
APT56_RS03475  794051 ..  794100 + -10.6  -4.09685   CCGCGCGGCGCGGAC GGGA-GCAGGAGCGCGCGGGCAG GGTCA CTGGCAGCGCGCAATTGCGTCCC TTTTAAAAAATGCGA  79 47
APT56_RS03480 NONE
APT56_RS03485  795268 ..  795284 + -10.8  -5.81412   AATCGCTGCGAAAAA              GCCCGC CTCGT GCGGGC              TTTTTTTTACATCCC 100 39
APT56_RS03490  796514 ..  796542 +   -13  -4.34402   TGCCCTGACGTCGCG        CCGGGCCGACGG CAAGC CCGCCGGCCCGC        TTTTCATGTCCAACG  95 33
APT56_RS03495  797295 ..  797313 +  -4.4  -2.81133   AAGCTTGAACTTTGA             GTCCGGGC GGC GCCTGCGC             TATAGTGACTACATG  43 26
APT56_RS03500  797812 ..  797833 + -15.9  -4.72272   CCGGCCGATAAAAAA           GCCCTTCGG TTTC CCGAAGGGC            TTTTTGCTGGGCGCG 100 85
APT56_RS03515 NONE
APT56_RS03520  802697 ..  802717 + -16.9  -5.63517   CGCGGTCAGCAAAAA            GGGCCGCAT TCG ATGCGGCCC            TTTTTTATTTCCGAC 100 45
        glyA  804887 ..  804910 +   -16  -5.07652   GCCCGTGGCTGACAA          GGACGGCTCC GCGA GGGGCCGTCC           TTTTGTTTTCAGGCC 100 61
APT56_RS03535  805617 ..  805647 +  -6.7  -3.53012   CTGGCGCGGCCTGAT      CCGCAGGCGGCCGC GGTG GCG-CTACCGGCGG       TTTGCCGCCCGGCGC  57 105
APT56_RS03550  808896 ..  808939 +  -7.4  -3.75169   GCGCCTCGGCACAGC ACCGCCG-CGAAC-GCCTGC GAGCGG GTCGGCAGTTCGTCGGCGGC TTTCATCGCGTAGTC  64 361
APT56_RS03565 NONE
APT56_RS03570 NONE
APT56_RS03575  817957 ..  817976 +   -15  -4.82901   CGCCCGTGGCAAAAA            GGGGACGC AATC GCGTCCCC             TTTTTCTGGGGCCGC 100 101
APT56_RS03580  818208 ..  818232 + -10.8  -5.55769   GCTTTGCCCCGAAAA         CCCGCATGAAC ATTG GTTC-TGCGGG          TTTTTTGTTGTCCGG 100 79
APT56_RS03590  819708 ..  819738 + -12.4  -3.01712   TTGGCCTTGGACGGG       TCGCGCTTGCCGCG ACC CGCGGCGCGAGCGG       TATTCGAGAAAGCCG  68 96
APT56_RS03595  820961 ..  820976 +  -3.2  -3.78934   CAGGCGCTGGTAGAG              CGCG ATGGCCGC CGCG               TTGTTGTCGCGGACA  55 180
APT56_RS03605  822760 ..  822776 +  -9.4  -4.24342   ATAGCGGCGCCCTGG              CCCTGG CGCAT CCAGGG              TTTCTTGATCGACGC  81 101
APT56_RS03610  823829 ..  823839 +  -8.2  -3.20573   CCACCTGCACCGGGC                 CGCC GTC GGCG                 TCTTCGTATAAGTGG  56 368
APT56_RS03625  826851 ..  826889 + -14.6  -3.15574   CCGAGCCCGCCTGAG   GCGATGGCGCCGGC CGCCGGGGAAC GCCGGCGCCATCGG   TGTTACTCAGCTTGC  80 27
APT56_RS03630  828586 ..  828632 + -11.6  -4.11692   CCACCAGCGCCAGTA GCTGGCGTTGCGGGC-CAT-CC AGCGC GGCATGAGCGCGCAGCGCCTGC TTTTCGCCGTCGGTC  82 125
APT56_RS03645  832221 ..  832255 +  -8.3  -3.14132   CCGGCCAGCACTTCG     CGCGCGGCGGCGGCG GCCTG CGCCACCGCCTGGCA     TTGCTGGAACGCGAC  56 412
APT56_RS03690 NONE
APT56_RS03695  839934 ..  839955 +  -6.5  -3.35992   TTCCGAAAAGATTCG           TGGAACCTG ACGC CCGGTTCCG            TTACTTACGCTGCAT  55 16
APT56_RS03700 NONE
APT56_RS03705 NONE
APT56_RS03710 NONE
APT56_RS03715  842301 ..  842318 +  -2.6  -2.91912   CCGTGGCGAGACCAA             TCGCGG CATCGC CCGCAA              TCTCTGAGTCCGTCA  41 1
APT56_RS03720  843689 ..  843709 +  -4.6  -2.87564   CATCCGCGACTTCGC           GCAGC-GCC TTCG GGCAGCAGC            TGTATGACGGCCTGG  45 80
APT56_RS03725 NONE
APT56_RS03730 NONE
APT56_RS03735 NONE
APT56_RS03740 NONE
APT56_RS03745 NONE
APT56_RS03750 NONE
        fliI NONE
APT56_RS03760 NONE
APT56_RS03765 NONE
APT56_RS03770 NONE
        ssaR NONE
APT56_RS03780 NONE
APT56_RS03785 NONE
APT56_RS03790 NONE
APT56_RS03795 NONE
APT56_RS03800  855800 ..  855833 + -11.7  -3.29461   CTGACGGCGGCGCGC     GGGGCGGGCGGCTC AGTCGTC GAGCCG-CAGCCCC     TTCTGGGCCAGCTTG  68 43
APT56_RS03825  863165 ..  863215 + -16.1  -2.70932   CTGAACGGCCGCGGG CGGTGCGCGC-CGCCGCGGTG-CAG AGT CTGGCGCCGCGGTGCGGGGGCGCCG TCATTCAGCGCGCCG  78 37
APT56_RS03840  865821 ..  865835 + -12.8  -3.80893   TCTTAGGGCCGCTGG               CGGCGC GCG GCGCCG               TTTGCGTTGTCACGT  84 368
APT56_RS03850  866955 ..  866975 +  -2.4  -3.90707   ATCTTTAGCATAAGT            GCATGCGC AATTG GTGCGCGC            CTTTTTTTAATCACA  55 63
APT56_RS03855  867865 ..  867889 +  -4.9  -2.87132   CAAGGTGCTGGATAT         CGGCCTGGAC GCCTGA GACC-GGCCG          TCTGTCACGGACACG  45 10
APT56_RS03860  868959 ..  868992 + -12.4  -2.90901   CCCGTCCCGCGTCGC    CGCGAG-GCGG-CGCC GTCA GGCGGCCGCGCGCGCG     TGTCGTTCCAACTGT  66 83
APT56_RS03870  870494 ..  870508 + -11.4  -3.13403   AGAAGTCCTTGATGC               CGCTGG CGG CCAGCG               TCTTGATCGGGCCGG  64 290
APT56_RS03890  874244 ..  874275 +  -5.1  -2.55351   ACCGCCAGGCCGGCG     ACGGCTTCGACCGCT CCTG AGCGG-CG-GGCCGG      ATTCATATCGAAAGA  43 6
        rnhA  874786 ..  874804 + -13.8  -2.65112   TTGAACCTCCCGCCG             GGCGGCGC GGC GTGCCGCC             TGGTGTCCGTCAATT  70 37
APT56_RS03900  876105 ..  876119 +  -2.7  -2.70932   GCAGGTCGTGAACAA               CGGCG CCTGA CGCCA               TCATTCCAGCGGACG  38 16
APT56_RS03905 NONE
APT56_RS03910  880009 ..  880030 +  -7.3  -2.85565   TTTGCGGGGCGACTT           GCACACTTT CAAA AAAGCGTGC            TAATATTTCGCCTCT  52 46
APT56_RS03915  880233 ..  880252 +  -9.3  -5.79595   CCGAACGACAATGAA            GCCAACC TTAGCC GGTTGGC             TTTTTTGTTTTGCGC 100 134
APT56_RS03945 NONE
APT56_RS03950 NONE
APT56_RS03960  888860 ..  888881 + -11.5  -4.09685   GCGCGCTAGGCGCGC           CGGGGACGC CAGG GCGTCCGCG            TTTTCCGCCATCAGG  81 32
APT56_RS03970  890838 ..  890855 +  -2.5  -4.08216   GCTTCGCGCAGCGGG             GTGCGGC CCAG GCCGGTC              TTTTCGACCAGATCG  58 511
APT56_RS04020 NONE
APT56_RS04025  900333 ..  900352 +  -6.4  -3.61398   TGCAGGAAAGTCATC            GGCT-TGCC GCG GGCATGGCC            TTCTTCCACCCCGCC  57 370
APT56_RS04040 NONE
APT56_RS04045  903588 ..  903620 +  -7.6  -3.60627   TTGATGCGTATCAAT      GGCGCCGGGTTCGC TTGAT GTGAACCTGGCGGG      TTTCCGGTAGCATGG  63 37
APT56_RS04050  904190 ..  904209 + -10.7  -5.06414   GGCGCCGCCCGCCCA            GCCCCTC CCCGCC GAGGGGC             TTTTTCTTGCCCGCG 100 87
        fusA  906542 ..  906563 + -17.3  -5.21709   ATCGGCTCGGAACAA           GGGCCACCC GTGC GGGTGGCCC            TTTTTTCATGTCGGC 100 47
APT56_RS04065  908574 ..  908590 +  -7.9  -2.87132   ACCATGCGTTGCCAG              GTGTCCG GTC CGGTCAC              TGTGTCCACGAACAG  50 337
APT56_RS04075  910002 ..  910014 +  -2.6  -4.07678   ATCACCGTGATCAGC                CCGT GGTCG GCGG                TTTCCTGTTTTAGCA  58 303
APT56_RS04130 NONE
APT56_RS04135  920088 ..  920104 +  -2.1  -2.52543   ACTCCTGATACCCTC              GTGAGCC TCC GGATCCC              TGGGTTGCCGCGGGT  37 33
APT56_RS04140  921806 ..  921820 + -12.8  -2.71144   TTGGCGCCATCCCGA               GGGCCG GCA CGGCCC               TGCTTCAGGAGGATG  68 211
APT56_RS04145 NONE
APT56_RS04150  923869 ..  923892 + -16.7  -4.13995   TTCCGCGTGCAGACA          CGGCCCGGC TTTCAT GCCGGGCCG           TTTGATTTGTGCGCC  95 52
APT56_RS04155  924890 ..  924903 +  -9.5  -3.44146   GGCTACTGAGCGGCA               GGCGC CGTG GCGCC                TTGCTTCTCCAGCCG  65 32
APT56_RS04165  926587 ..  926604 + -14.1  -5.60993   ATGACGCAATGAAAA             GCGGCCC CTCG GGGCCGC              TTTTTTTGTCAGACG 100 37
APT56_RS04190 NONE
APT56_RS04195  932588 ..  932615 +  -5.6  -3.16323   TCCTAGACGACGCGC        TGTCAGGGCA AGAAAAGC TGCTCTGACG         TTCATAAGCGGTTTT  49 0
        ssrS NONE
APT56_RS04205  933835 ..  933864 + -12.1  -3.14132   TAGCCCATCAGGAAT       ACCGCGCTCACCTG GCC CAGG-GGGCGCGGC       TTGCTCGAAAACCAC  68 172
APT56_RS04215 NONE
APT56_RS04220 NONE
APT56_RS04225  937673 ..  937703 + -10.5  -3.97947   GGATGCCCTCGCCGC      GGTACAGGTCCAGG TACT CCTGGATCTG-GCC       TTTCTCCTCGGTGCC  75 475
APT56_RS04235  939137 ..  939175 +  -5.1  -3.92996   ATATAGAGAGACCAG  AGCG-CGTGGCAGTGGGC GGAT GTTCCCCGCCACGGCGCC   TTCTTATATATAGGC  60 109
APT56_RS04240  942003 ..  942038 +  -4.6  -3.38272   CTGGGATCGGTTGTG    GGCTTGGGTAGAGGGA CTCC TCCCTGTGTCCATGAC     TTCTGACTACTGATC  51 90
APT56_RS04245 NONE
APT56_RS04250  942275 ..  942325 +  -7.6  -4.18197   TGGTGAGATGTAGAG GCTAACTCATAGCGTCGTGCGGAT AAT GTCTGCCCGGTCTTATGAGTTAGG TTTTACCTGACAGCT  71 52
APT56_RS04255  945532 ..  945548 +  -2.1  -2.94099   ATTACACCCACTGTG              CGGGATC ATC GAGCCAG              TCTCTGATCCCCCAC  41 114
         rrf  945750 ..  945783 + -20.5  -4.72986   CAGGCTTTTATTGCT     CAAAACCCCATAGGC TCGC GCCTGTGGGGTTTTG      TTTTTGGTGCGCCTC 100 36
APT56_RS04265  946693 ..  946711 + -13.1  -4.89009   GGCGTTTGGGACGAA             GGCCGGC ATTGC GCCGGCC             TTTTTCATTGGCTGT 100 47
APT56_RS04270  948311 ..  948324 +  -3.7  -3.62591   GCAGCGTTCGGCTTG               CGCGC GGTC GCGGG                TTTGGAGGTTGTGGC  51 253
APT56_RS04280 NONE
APT56_RS04285  951098 ..  951138 + -10.9  -3.61398   GCGGCCTTGGCGCGG  GCCGCGGCCTCGTCGGC GGCGCGA GCCGCCTTGGCCGCGTC  TTCTTCCGCCGCAGC  71 364
        rnpB  953198 ..  953209 +  -7.2  -5.24129   TCCGATCGACGCGTG                GCGC CGCG GCGC                 TTTTTTCTCGCCGCG 100 47
APT56_RS04300 NONE
APT56_RS04305 NONE
APT56_RS04310 NONE
APT56_RS04315 NONE
APT56_RS04320  959885 ..  959902 +  -2.6  -2.73364   GCAAGCGGCCAAGGG             GCAGGG GGACAA CCATGC              TGCTTGAGATCGCCC  38 1
APT56_RS04325 NONE
APT56_RS04330 NONE
APT56_RS04335 NONE
APT56_RS04340 NONE
        murC NONE
APT56_RS04350 NONE
APT56_RS04355 NONE
APT56_RS04360  969384 ..  969395 +  -3.6  -3.55622   TTGCGGACCAAAGCA                GTCG GCTT CGGC                 TTTGAGGCGATTCAC  49 128
APT56_RS04365  970714 ..  970744 +  -3.1  -5.05113   CGGCCTGCCTGTCCC      CGCGGGCAG-GCCG GAGG CGGAGCGGTCCGTG       TTTTCTTTGTATGGC  81 83
APT56_RS04370  971838 ..  971879 + -12.4  -4.56914   CCGGTCAGCCGCTGA TGGTCGG-TG-C-GCCGGGGG CCG TCCCCGGCTGGCAACCGGCCA TTTTCATTTGGATGG 100 43
APT56_RS04380  973673 ..  973715 +  -3.3  -4.08706   GACGCCGCCCTGGCC CCATGCGGGCG-CGGCGG GGCTCGTG CGGCCGACATACGCATGG TTTCTCTGCTCAAAA  60 161
        secA NONE
APT56_RS04390  977190 ..  977210 + -13.9  -3.47526   TCTGATCCAACCTTC            CGCGCGCGG TCG CCGCGCGGG            TCTTTCCCTTCGTCC  81 36
APT56_RS04395 NONE
APT56_RS04400 NONE
APT56_RS04405  980867 ..  980888 + -17.3  -5.76949   GCCGGGAAATGTGCA           GCGGGGCCT TGGA AGGCCCCGC            TTTTTTTTCGGGATG 100 47
APT56_RS04415 NONE
APT56_RS04420  982984 ..  982995 +  -3.6  -2.70932   CGGCCGCCCGACACG                CTCC GCGC GGGG                 TCGTTCCCAGAGGGG  40 44
APT56_RS04425  984220 ..  984235 +  -4.7  -3.41745   GCCGCCGCCCCAGGC              CAGCT CGTTGA AGCTG               TTGATCTTCTCGCGG  52 438
APT56_RS04450  988914 ..  988924 +  -6.8  -3.40403   TGGTGGGCTGCACGT                 GGTC GTT GACC                 TTGTCGTCGCCAACG  55 257
APT56_RS04460  991934 ..  991952 + -11.6  -3.17212   GGCCGCGCCCATGCG             CCGCACGC CGC GCGCGCGG             TTGATGGCGTCGTGC  64 296
APT56_RS04470  994732 ..  994746 +  -2.7  -5.41143   GATACGGGCCGGCCG               GGGGC TTTGT GACCC               TTTTTTTGGACGATA  89 170
APT56_RS04475  997120 ..  997153 + -21.1  -3.81137   GCCACCGACACAAAA     GGGCAGTCAGGAAGG CTTT CCTTCCCGACTGCCC      TTTACGTCTTTGGCG 100 63
APT56_RS04480 NONE
APT56_RS04485 NONE
APT56_RS04490  999828 ..  999845 + -14.1  -5.27335   CTCCCCGATGCAGAA             CGGCCGC GCAA GCGGCCG              TTTTTCTTTGGCGCG 100 52
APT56_RS04495 1000147 .. 1000170 + -16.8  -5.40464   GCAGATGTGCAAAAA          GCCCCTGGTT GCAA AACCAGGGGC           TTTTTGTTTGTGGTG 100 79
APT56_RS04530 1006253 .. 1006279 +  -9.2  -3.47349   CGCCGGCCGGGAGCG         CCGGCGGCGCCG TGG CGCCGGCTCCGG         TTATCGCTTTCGCCC  65 271
APT56_RS04535 1007573 .. 1007588 +  -3.2  -4.37092   GGTGACCAGATCCAA              CGGC ACCTGGCC GCCG               TTTTCTCCGGCCAGT  67 370
APT56_RS04545 1008586 .. 1008629 + -15.8  -3.06696   CGGACCGGGCCTTGG GCCGGCAGCGTGGCGGCCCC CCGA GGCGCCGCCACGTCGCAGCC TGTCTTAACGGGCGG  82 47
APT56_RS04555 1013111 .. 1013150 +   -12  -3.85698   CGGCCGACAGCGTCA  CTGGCGCGGGCAGGCCGTC CTC GGCGCCCAGGC-GCGCCAG  TTTCTGGCGCAAGCG  81 202
APT56_RS04570 1016091 .. 1016132 +  -3.4  -4.89339   CTTGCACCGCGCTCG GACGCCCGCCCTGGGGAC CGTGCT GTCGAGGGGGCCGGCGAC  TTTTTGTGGATGATT  78 59
APT56_RS04575 1016391 .. 1016410 +   -15  -4.82855   AGTATCAAGCGTAAA            GCCCACCG GAAA CGGTGGGC             TTTTTGCGTTTCGTC 100 53
APT56_RS04580 1017460 .. 1017479 +   -15  -3.51329   CGCCGGATATCTCGG            GCGCCACC CTTG GGTGGCGC             TTGTCATTGCGCGTC  86 85
APT56_RS04590 NONE
APT56_RS04595 1019845 .. 1019897 + -12.6  -4.07568   TCAAGCAGTAGCGCC GGGCGCCGCGCCGT-C-CATGCCG GGGCGGG CGGCCCGCGCGCGGCGCGGCGCCA TTTTCCAACGGCCCA  85 30
APT56_RS04600 1020465 .. 1020488 +  -9.4  -4.33417   CGGCGACAGCACGAC          GCCACGGCCG TCGG CGGCCGAGTC           TTTCTTCTCGATCAA  78 237
APT56_RS04635 NONE
APT56_RS04640 NONE
APT56_RS04645 1030252 .. 1030268 + -10.8  -5.63374   GCCATGCAAGCAAAA              GCCCGC GTCGA GCGGGC              TTTTTTTCGTCTTGA 100 51
APT56_RS04655 1033508 .. 1033529 +  -5.9   -3.3482   CCAGGTAGGGCAGCA           GGCTCTTGGC GAT GTCAA-AGCC           TTCCTTGGCGCCTTC  52 500
        fadE 1036869 .. 1036899 +    -6  -3.64703   CGGGACGATCAGTCG       TCCTGATTCGGGTC CAT GCCCGGGAACAGGA       TTTCGGTGAAGCCGA  57 191
APT56_RS04710 1045730 .. 1045755 + -16.1  -4.20354   CAATCCTTTCACCAG         CGCGGCTGGCC GGTA GGTCGGCCGCG          TTTTCACGTTCCCTT 100 208
APT56_RS04715 1047335 .. 1047354 + -16.4  -5.26316   ACAGGAACGCGAAAA            GGGCGCCG GTGA CGGCGCCC             TTTTTTATCCCCTGG 100 48
APT56_RS04740 1053306 .. 1053320 +  -4.2  -2.79785   AAATGGGGCCGGCAG               GCGG CAAGGCA CCGC               GTTGTTCCGGTGTGG  43 273
APT56_RS04745 1054771 .. 1054794 +   -11  -2.71712   GTCATGCTCGCGGCC          GG-CAGCGCCG CCC TGGCGCTGGCC          CTTTCGACCGCGGCG  62 433
APT56_RS04750 1058014 .. 1058025 +  -7.2  -3.08133   CGCTTCTGACTGTCA                GCGC AGCA GCGC                 TTGCCTGGCTGCCTG  51 32
APT56_RS04780 NONE
APT56_RS04785 NONE
APT56_RS04790 1066584 .. 1066606 +  -7.6  -2.81312   CCCGCCGCCAGGGCG           TCAGGCGGCC GCC GGTTGCCGGA           TCTGCTCGATCAGTT  52 121
APT56_RS04800 NONE
APT56_RS04805 NONE
APT56_RS04810 NONE
APT56_RS04815 1071461 .. 1071478 +  -9.8  -3.05715   TCAGGAAGGCGGCAA             CCGCGC CGCCCA GCGCGG              TTCAGTCCAGGCGTT  60 70
APT56_RS04840 1076140 .. 1076156 + -10.8  -5.31519   CCTCGCAATCAACAA              CCCGCC CTGGT GGCGGG              TTTTTCTTTCGCTGT 100 50
APT56_RS04860 1080497 .. 1080538 +  -2.9   -3.7282   GGCGCGACACCCAGG GCGATATCACGCTGGTCCTG GTC CGAGGCCATCGTCATG-CGC TTGTTGCTGGCGTAC  53 129
APT56_RS04875 1086703 .. 1086713 +  -2.4  -3.14132   GGGCGGCTTTTATTT                 TCGC GCC GCGC                 TTGATGGCGCGGCCG  42 125
APT56_RS04885 1089388 .. 1089409 + -17.3   -3.6053   CACCAGCCTGAAAAG           GAGGCGCCC CGCG GGGCGCCTC            TTGCTTTGTGGCGCG  93 78
APT56_RS04895 1092261 .. 1092301 +  -3.1  -3.33696   CCGGCTTCCGAAACG CTG-GCCGCCCGGCCCCGC GAGCG GCGG-GCCAGGCGCAACGG TTCATTCCAGCGCCG  47 65
APT56_RS04920 1098992 .. 1099022 +  -7.5  -2.66316   TGAGGCATGAGGCGG      GCGGCGCCTCGC CAAGGAAT GCG-GGCGCCGG       TACTGTGCTAGCGGA  51 38
APT56_RS04955 NONE
APT56_RS04960 NONE
APT56_RS04965 1109406 .. 1109422 +  -7.9  -4.21194   GAATCGTCGCCTATG              CCGTCAG ATT CGGACGG              TTTTACCTGATGCAA  75 204
APT56_RS04970 1110534 .. 1110570 + -25.4  -3.62591   ACACGTTACCTTTTG    GGCCTATCACGTTGCC CATAA GGCAACGTGATAGGCC    TTTCGCCGTTCTAGA 100 81
APT56_RS04975 1111599 .. 1111657 +  -9.5  -4.87665   GCCGGGCCTAATAAA G--ATGGTCAGACAGAACCCCGCTAGGCG TAG CGCTTCGCGGGGAACGGGCTGACCATAGC TTTTTATGGCTAGGG 100 103
APT56_RS04980 NONE
APT56_RS04985 NONE
APT56_RS04990 1117972 .. 1117982 +  -8.2  -2.73364   CGGCCTGGTGGCGGC                 GGGC GTG GCCC                 TGCTTGCCGTCGCGG  53 59
APT56_RS04995 NONE
APT56_RS05000 1120534 .. 1120574 + -11.2  -3.30441   ACTCGAACTTCAGCC CGTCGGGCGTCTGCC-GGAT CAC GTCCAGGTAG-CGGCCGACG TTGTAGACCGTGGTC  66 469
APT56_RS05020 1123655 .. 1123688 +  -7.4  -3.15663   GCTGTCGACCGGCGG     CGTGTACCAGTCGCC ATCCA GGCG-CAGGTAGACG     TTGCTGCGGCTGCCT  53 314
APT56_RS05040 NONE
APT56_RS05045 1132779 .. 1132791 +  -4.7  -2.83299   CCCGCACCCGCGAGG                CCGCC CAT GGCTG                ATTTCGATATCGTCG  45 12
APT56_RS05050 1133872 .. 1133897 + -14.7  -5.08824   CCGCCCAAACAAAAA         TCCCCGCCGGT TCGC ACCAGCGGGGA          TTTTTTCGATCGGGC 100 189
APT56_RS05060 1137018 .. 1137032 +    -7  -3.68988   TAATCGGCCACCTGC               AGCGCG GCG CGCGCG               TTCTGTTCGATCAGC  64 185
APT56_RS05135 NONE
APT56_RS05140 1156866 .. 1156891 + -14.7  -4.35524   TTCCGGCTAACCAGA         CAGCGAAGCCC CGCG GGGCTTCGCCG          TTTTGCCTTTCCCGC 100 49
APT56_RS05145 1157874 .. 1157906 +  -3.1  -2.57564   CCTGCGCTCCGGGCT      GACCCGCGGCGGAGG TGG CCACTGATGCGTGCC      GTTCTGAAACGCTGG  39 1
APT56_RS05150 1158890 .. 1158909 +  -4.2  -3.73775   GCCGGCTCCGCGGCA            TCCCGATG GCCC CGTCGGCA             TTTCATCGGCCTCGG  56 103
APT56_RS05155 NONE
APT56_RS05160 1161356 .. 1161375 +   -10  -4.56133   CGTGGTTTTGGCAAA            GGGCTTCT TTCT GGAAGCCC             TTTTGCTTGTTGGCG  89 447
APT56_RS05175 1164222 .. 1164238 +  -7.9  -3.53091   GTCGGCGCGCAGCAG              CCTGGCC AGC GGCGAGG              TTTCGCCCAGCGGGT  58 369
APT56_RS05185 1166560 .. 1166581 +  -8.7  -5.44721   CAGGCGGTCCGAAAA           TCCCGGC CATTGCGC GCCGGGA            TTTTTTTCGGATGAT 100 51
APT56_RS05190 1167238 .. 1167261 +  -4.5  -2.80816   TATCATTGAATGAAG          CGGTTTGGC GTGATG GTCATACCG           TATCGTCGATACCGC  43 32
APT56_RS05195 1167912 .. 1167924 +  -4.7  -2.80098   CTGGGCAAACCTCAC                ACCGC CGC GCGGG                ATATTTTGCGATCCT  45 105
APT56_RS05200 1168303 .. 1168321 + -17.4  -5.75342   CGCCGCACGCAAAAA             CGCCCGGC ATT GCCGGGCG             TTTTTTTTGCGCGCA 100 81
APT56_RS05225 NONE
APT56_RS05230 NONE
APT56_RS05235 1175091 .. 1175104 +  -9.5  -5.08824   CTGGCCATAAAAAAA               GCGCC CGAA GGCGC                TTTTTTCAATGCACA 100 410
APT56_RS05245 NONE
APT56_RS05250 1179549 .. 1179573 +  -2.6  -3.73775   GCCCGGCCTTACAGC          ACCGGCCGCG CCACC CGCTGCAGGA          TTTCCTCGCCGTAGG  53 135
        ompR 1183675 .. 1183685 +  -4.6  -3.31792   AGACCGTCTGGGGCA                 TCGG CTA CCGG                 TTCTCGCCCTGATGC  51 3
APT56_RS05270 1185253 .. 1185265 +  -4.7  -4.07568   GGACGGCGCCTGATC                CGGCC CGG GCCCG                TTTTGCGCCCGGCGC  64 28
APT56_RS05275 1186434 .. 1186456 +    -9  -3.97947   AAATCGGTCGGGCAT           CCCGGGGAGG GGG CGTCCCGGGG           TTTATGATCCGTAGG  72 39
APT56_RS05280 1187493 .. 1187517 +  -7.8  -3.73072   CCCGTTCAGGCTGAG         GCGCCGG-CGG GATA TCGTCCGGTGC          TTTGGTGGCACGCTT  65 41
APT56_RS05285 1188521 .. 1188556 +  -8.9  -3.53224   CGCGCTAGGGCGGGC    CG-CCTGCGTCGGCGG GGGGG CCGCAGGCGCATGACG    TTTGCCCCGCGCCTG  62 33
APT56_RS05320 1194838 .. 1194864 +  -3.6  -3.60792   GACGCACATAGATGC         CCGGCTCGAT CGTCAGC ATCATGCCGG         TTTCCAGCTTGCGCC  51 246
APT56_RS05330 1197614 .. 1197638 + -16.5  -3.48924   GCAGAACTCCGTCTG          CCGCAACCTGT TGA GCAGGTTGCGG          TTGTATCCCAAGTCC  91 236
APT56_RS05335 1198370 .. 1198388 +  -5.8  -3.67134   CCCGCTCGACGCGCG             CCGGTTCC GCC GGCCCCGG             TTCTTCCGCTAGTTT  57 217
APT56_RS05340 NONE
APT56_RS05345 1202630 .. 1202662 +  -2.5  -4.11216   GCGAGTTCCGGCCCG      TCCAGGCCGGGGC CCGCCAC GCCCCCGTCGGCA      TTTTCCGGATGACCC  58 84
APT56_RS05350 1203608 .. 1203658 + -13.1  -2.90075   GGGGAGGGTTGCCGC CGCCGGTCGATGCGCGGCGGCGGG TAGT CAAGCCGGCGCGCGT-GGCCGCCG TGTCATTCCGGCAGC  69 87
APT56_RS05360 1206485 .. 1206509 +  -7.1   -3.0263   GGGTAGCGGTGGGCT          TTCTCCAGCAC CTT GTGCTTGAGGG          TCTTGAGAAAGTGGT  52 423
APT56_RS05385 NONE
APT56_RS05390 1210328 .. 1210351 +  -8.1   -3.6682   CATAGACCGGGGCCA          GCTTGCGGC TGCGCT GCTGCAGGC           TTTCGATCACTGGCC  60 178
APT56_RS05410 1215952 .. 1215964 +  -7.7  -3.21144   TGCATATGCATTGCA                GTGCT CGC AGCAC                TCTCGTTTTGTTCTT  57 209
APT56_RS05415 1217503 .. 1217519 + -10.8  -5.26875   CGCGCCCATGAAAAA              GCGCCC AGCCA GGGCGC              TTTTTTCATTCGGCA 100 69
APT56_RS05425 NONE
APT56_RS05430 1219751 .. 1219771 +  -2.6  -2.55829   ACGGGAAAGAACTGT           TTGC-TGCG TTGC CGCAAGTAA            GGTTTCTTTCGGTGG  38 124
APT56_RS05435 1220704 .. 1220730 + -13.7  -4.74801   CGCGGCCATGAAAAA         GCCCCCCGGTT TCAGC AACCGAGGGGC         TTTTTCATGGAGTTG 100 54
APT56_RS05445 1222824 .. 1222845 + -12.3  -5.51165   GCAGAGCTGGAATTA           G-GGCCACCC TTC GGGTGGCCTC           TTTTTTTGCCCTTTT 100 99
APT56_RS05475 1227773 .. 1227813 + -18.9   -4.4017   GGATTGGACGTCGTC  CTCGAGGCGGCCGGCACCT AGA ATGGGCCGGCCGCCTCGGC  TTTTCTGGAGCTTCC 100 67
APT56_RS05480 1228468 .. 1228491 +  -5.8  -3.18264   AGGCGCCAGGCGATC          GACGACGTCC AGCA GGGCGGCGCC           TTCGTCCGTGACAAG  50 212
APT56_RS05510 1230981 .. 1231011 +  -7.4  -2.79183   GCGTAGATGCCGTGC       TCGACCATGCGCTG CGC CAGCGGTCGGTCGG       TCTGGTGGCCCTGCA  49 215
APT56_RS05520 1232808 .. 1232824 +  -6.5  -3.60627   GTTGGAGGGGGCGGT              CGCATGA GCG TCCTGCG              TTTGACCTGCAGTCC  59 19
APT56_RS05525 1233851 .. 1233878 +  -7.6  -3.55071   TTGTGGGTTCCGGGT        GCGTCGCCATTG CTGT CAGTGTCGCCGC         TTTCGGCGGATCTGC  60 424
APT56_RS05540 1235516 .. 1235531 + -10.4  -5.52384   GCTGCATGAAAAAAA              GGACCC TCGC GGGTCC               TTTTTTTCATGGGCG 100 47
APT56_RS05555 1237536 .. 1237556 + -12.6  -5.88565   TAGTTGAAAGCAAAA            GCCCCTTC TATAT GAAGGGGC            TTTTTTTATTCTCGG 100 85
APT56_RS05570 1241445 .. 1241466 +  -2.2  -3.74608   CCATTCGAACCGACA           TCCTCCTC GCGGAG GAAGGGGA            GTTTTTGTGTTTCTT  53 43
APT56_RS05575 NONE
APT56_RS05580 1242952 .. 1243008 +  -4.4  -4.40963   CGCGGCGGGGAATAT TTGCTTTCCCGGGCTTGAAATAGGGGT ATTG GCCCCCATT-CATGACTGCGAAAGCCA TTCTTTTTGGAGGAT  69 167
APT56_RS05585 NONE
APT56_RS05590 1244012 .. 1244027 +  -5.4  -3.48276   GCGTCTTGAAAAACC              CTGCGGG CAG CCC-CAG              TTATGTGGGGACAGG  53 32
        dnaK 1246036 .. 1246074 + -15.3     -2.89   CGCTGACCTGCCTCT  G-CCGCCCGGTAGCCGGA GAAA TCCGCCTACCGGGCGAAC   TCATTCTGTAGCACT  77 49
APT56_RS05600 1247288 .. 1247325 + -23.5   -3.9941   CCATTGCGGCGGACC   ACGGCCCAGGGTCTGGA GGTA TCCGGACCCTGGGCCGC    TTTCATTGTGGCAGG 100 61
APT56_RS05615 1251761 .. 1251815 + -22.2  -3.59979   CTGCATAAGCGTCGG CAGGCCTCGTCATGCCAGGATGTTGC GAT GCAATATCCTGGCGTGGCGCGGCCGA TTTGAGATCGAAGCG 100 33
APT56_RS05620 1252460 .. 1252475 + -11.8  -6.12328   AGTCCCCTCACTGAA              CCGGCG AGAT CGCCGG               TTTTTTTTATCTTGT 100 58
APT56_RS05625 1253279 .. 1253303 +  -9.2  -3.59279   GCCAGGCATCCAGCA          GCCGGCGCAT CCACT GTGCGCCGGG          TTCCTTGTTGTAGTG  63 227
APT56_RS05640 NONE
APT56_RS05645 1256123 .. 1256140 + -12.7   -4.8622   CCCGCATGCAAAAAA             CCCTCGG TTCG CCGAGGG              TTTTTCCTTGGGCGC 100 51
APT56_RS05655 1258091 .. 1258114 + -15.2  -5.42259   CGCAACCCTGAAAGA          CCCGCCGGCC GCCA GGCCTGCGGG           TTTTTTTGGGGCTCC 100 56
APT56_RS05660 1259296 .. 1259307 +  -7.2  -3.14132   GATTTCGTTCCATGA                GCGG CGCA CCGC                 TTGATGCGCCAAAGC  51 39
APT56_RS05665 1260688 .. 1260700 +  -4.7  -3.84246   TGCAAAGCTATAAGT                CCTCG GCG CGTGG                TTTCGTGGTTGGGGA  60 28
APT56_RS05715 NONE
APT56_RS05720 1275059 .. 1275108 +  -2.8  -3.53761   CGCTCGGGCGCCTCG GAGAATGCCAGCACCTCGTT CTTCTGCACC AGCCAGGTGCGGGCCTTGTC TTTCAGCACCGGTTC  50 495
APT56_RS05740 NONE
APT56_RS05745 1279977 .. 1280020 + -20.2   -2.7535   GCGAGAGGCTTGCGT CGCCCGCCGGAGTCGGCCGC GCGG GCGGCCGATTCCGGCATACG TGGTGTCTTGCGGCG  93 331
APT56_RS05795 1291094 .. 1291125 + -12.8  -2.57243   GCGCGCCGTTTCCCG      GCCGGGCCGCCCGG GGCG CGGGGCGGCCGGAC       ATGTTGTAATACTGG  67 78
APT56_RS05800 1292518 .. 1292530 + -10.5  -3.34013   GCCAAGAAACGGTAA                CGGGC GCC GCCCG                TTGCTTCCCGCAATC  67 26
APT56_RS05805 1293935 .. 1293952 + -12.7  -5.45652   GACCCTGCATAAAAA             CGGAGCC CGCG GGCTCCG              TTTTTTATTGCCGCT 100 54
APT56_RS05820 NONE
APT56_RS05825 1297668 .. 1297687 +  -4.8  -3.05463   TGCGCGCCGGACAGG            GGGCCGGC AGCG GCCAGCGC             TTGACTGGGGCGGAT  46 174
APT56_RS05835 NONE
APT56_RS05840 NONE
APT56_RS05845 1301761 .. 1301782 + -14.5   -5.1101   GAAGGCAAAGAAAAA           GGCCAATCC CGGG GGATTGGCC            TTTTTTGAATACTGG 100 59
APT56_RS05855 1303471 .. 1303484 +  -3.7  -3.06696   GCCCGTGTTTCGCCC               ACGGC GCCG GCCGG                TGTGTTCCGGCCGCC  45 110
APT56_RS05860 NONE
APT56_RS05865 1305128 .. 1305148 + -11.8  -5.40072   CGGGTGCCACGCCAG            GCCGGCCT CGAAA GGGCCGGC            TTTTTTTGCGCCCCG 100 49
APT56_RS05875 NONE
APT56_RS05880 NONE
APT56_RS05885 1311263 .. 1311287 + -13.6  -5.27335   CGCGCCGGCCGAAAG          CGGCATGCCT GGCGA GGGCATGCCG          TTTTTATTTGCGCGG 100 85
APT56_RS05890 1312250 .. 1312268 + -11.7   -5.1861   CGCCAAACGAAAAAA             CCCGCCT GATGA AGGCGGG             TTTTTTCGTGGTGGA 100 51
APT56_RS05900 1313420 .. 1313455 +   -19  -5.04601   CTCCCCATGACGCAA    CCGTGGTCGGTGCGAC GCAT GTCGCGACGGCCACGG     TTTTTCATTTGTAAG 100 54
APT56_RS05905 1315664 .. 1315681 + -14.1  -5.75342   TCCCGCTGGAGCAAA             CGGCGCC GCGA GGCGCCG              TTTTTTTTGCCCGGG 100 51
APT56_RS05910 NONE
APT56_RS05915 1317824 .. 1317843 +  -5.6  -3.62046   AGGCGCGGCCCAGTT            CCGGGTCG CGTC CCACCTGG             TTCTTCAGCCGGTAC  57 44
APT56_RS05925 1319854 .. 1319865 +  -5.8  -3.87815   TCGGCAGCTCGGAGT                GTCG GAGG CGAC                 TTTCTACACGTGGAA  63 242
APT56_RS05935 NONE
APT56_RS05940 NONE
APT56_RS05945 1323188 .. 1323202 +  -6.4  -3.10344   TCCCGCCGGCGCAAG               GGTTGT GCG ACAGCC               TGTCTTAGGTAGAGC  51 47
APT56_RS05950 1324004 .. 1324015 +  -7.2  -3.01924   CGGGTGCAGTAGGCG                CGCC GTCT GGCG                 TGTTAACGGCACCTG  52 512
APT56_RS05970 1327403 .. 1327426 +   -11  -2.70932   GAACAATCGCCCCAG          CAGGCCG-CGC GGC GCGTTGGCCTG          TCGTTCCGCCGCGAG  59 123
APT56_RS05985 1331116 .. 1331130 +  -3.5  -4.07568   AACGAGAATGCCCCG               GTGCT GAAAG AGCGC               TTTTCCCGCGCCGCC  60 75
APT56_RS05990 NONE
APT56_RS05995 NONE
APT56_RS06000 1334450 .. 1334461 +  -7.2  -3.32698   CGCCTGAGCCACGGC                CCGC GCCG GCGG                 TATTATGTGCCGTCC  55 34
APT56_RS06005 1335895 .. 1335905 +  -2.4  -4.07885   ACTCACGAACGGTTG                 CCCG TTG CCGG                 TTTTCAAGACCGGTG  58 152
APT56_RS06015 1337080 .. 1337136 +  -3.6  -4.08692   CGGCGCCGCGCAACA GGATACAATCACGGGTTTCGCCTGGAA TTAT TTCCAGGCC-AGCCCGTGGGCGGGTGC TTTTCCCCCGGGTTC  60 61
APT56_RS06020 1337922 .. 1337934 +  -5.5  -2.95223   CGCCGCCATCTAAGT                TTCCG TTC CGGAG                TCTGTAATGCCCTTG  48 28
APT56_RS06025 1338452 .. 1338470 + -17.4   -5.5112   CGACAGCATGAGAAA             GGCCGGCG GAT CGCCGGCC             TTTTTTCTTGGTGGC 100 45
APT56_RS06035 1339137 .. 1339166 + -17.9  -4.18197   ATTTTTCGTGAAAAA       CGCCCGCTGAAAC GCAA GTTCCAGCGGGCG        TTTTGCATGGGCGCT 100 44
APT56_RS06040 1341562 .. 1341590 +  -6.1  -5.75342   TCGTGGCGCAGGCGT       GAATGGCCGGCAC CTTGT GTGCCGGC--TTC       TTTTTTTTGGGGCGG 100 83
APT56_RS06050 1343120 .. 1343149 + -15.7  -5.15634   CTTCGGACCGCGACA       CCCGCACATCCCG TTCA CGGGGTCTGCGGG        TTTTTTCATGCAATG 100 66
APT56_RS06055 1343910 .. 1343931 + -12.3  -3.41878   GGCCTGAGGGCCGGC           GCGGGTCTA CTCG TAGGCCCGC            TTCTGCGTTGACCAC  73 34
APT56_RS06065 1351265 .. 1351303 +  -9.4  -3.84712   CCGCGCACCGTAATT  CGCCGCGC-CGCCGCAG GGGAGG CGGGGGCGGGCGCGGCC   TTTGGTGTCAGCTTG  73 158
APT56_RS06070 1352602 .. 1352615 +  -8.1  -3.14211   GTAGGCGAGCGGGGC               CCAGC CTGC GCTGG                TTGATGAGCGACACT  55 372
APT56_RS06080 NONE
APT56_RS06085 1353405 .. 1353416 +  -7.2  -2.94993   GTGATGGCAGGATTT                CCCC ACGC GGGG                 TGTAGTATTGTAAAT  50 102
APT56_RS06090 NONE
APT56_RS06095 NONE
APT56_RS06100 NONE
APT56_RS06105 NONE
APT56_RS06110 1359055 .. 1359070 +  -3.2  -3.05012   ACCCGTTATTACGTC              CGCG TTGTCTCC CGCG               ATTGATTTTTTTCTT  43 5
APT56_RS06115 1362052 .. 1362064 +  -4.7  -3.15544   GTTCACGGATCTGGC                CGACG AAG CGCCG                TTCATCGGCCTCCAG  47 467
APT56_RS06125 1363372 .. 1363382 +  -3.2  -3.65351   TATGTTTCTCTTGTA                 TTGC GTG GCGA                 TTTCAGTCGACCTAG  51 106
APT56_RS06130 NONE
APT56_RS06135 1365173 .. 1365191 +  -8.1  -4.14392   TGCACCAGACCCACG            CGGCAGGC CCGC GCC-GCCG             TTTTCCCCATTCAGC  71 156
APT56_RS06140 1368278 .. 1368316 +  -9.6  -2.96695   CGGCCGCTGGCACCA  TCGAGGCGCCGA-CCGGC CGCAT GCCGGATTGGCGCG-CGA  TCATTTCCTGACCGC  57 213
APT56_RS06165 1377148 .. 1377170 +  -2.7  -3.25088   AGGCGGCGCTTCCCC          CGACGCTACT TGAA AGGAGC-TCG           TTCATGGCTTTGCGC  44 41
APT56_RS06170 1378050 .. 1378064 +  -2.7  -3.59979   CCGACGCCAGGTACA               GCGCG GATTG CGCGA               TTTCCCGTGGCGCGG  50 161
APT56_RS06180 1379479 .. 1379491 +  -6.2  -3.14132   GCGATAGCTGAGGTT                GGGC TCGCT GCCC                TTCATGACGCCAAGG  50 246
APT56_RS06190 1380381 .. 1380398 + -14.1  -4.48987   GCGATGTAAATGAAG             GGCCCGC GCAA GCGGGCC              TTTTACTTATCGACG 100 32
APT56_RS06195 1380730 .. 1380754 + -12.1  -4.21607   ACTGGTTGATGACAT          GGCCGCCTG GCGCAAG CGGGCGGCC          TTTGTGTTGGCTGCC  95 76
APT56_RS06200 1381549 .. 1381588 +  -5.1  -3.90112   GGCGGCAGGTCGGCG  TCGCAATGTTCGCAGTTG GGGCG CAATT-CGAGCATGGCGG  TTTCCTTGAAGAGGG  60 368
APT56_RS06210 1382779 .. 1382810 +  -2.8  -3.66178   GGCCGTCGGACGGCG      GCTGGCGATGCGGG TGAG CCAGTATTGCCCGG       TTTCCACTTCCAGCG  50 143
APT56_RS06220 1384830 .. 1384842 + -10.5   -3.7829   GGAATGTCGCCATAG                GCGCC GTT GGCGC                TTTCCTCGGTCTGGT  71 282
APT56_RS06230 1387539 .. 1387557 +  -3.1  -3.60412   CGACCGTCCCTCCCA             GAGCG CAAAATCGC CGCTC             TTGTCTCTGCCCTTC  51 60
APT56_RS06235 NONE
APT56_RS06240 NONE
APT56_RS06245 1390773 .. 1390787 +  -2.8  -2.74563   CCCCGCATGAGGGGC               GTGC AATGAGC GCAC               TGGTTACCGTATCGA  40 17
APT56_RS06250 1392442 .. 1392477 + -11.8  -3.36327   CGCTTGAGGGGACGG    GTCCACGCCG-GGCGGG AGT TCCGTTGCGGCGCGGAC    TTATGCATAAAATAC  73 34
APT56_RS06255 1393180 .. 1393214 + -17.9  -2.90496   CCCCCCCCCCCCCCC    ACGCGGCGGCCTTCCT GAAA AGGA-GGCCGCCGCGG     TCATTTCAGGGCCGC  87 61
APT56_RS06260 1395091 .. 1395134 +  -7.5  -5.63103   CACGCCAGGCCAACG CCGCCCCGGACTCCACCGTTGA AGC TTGACGGTTG---CCGGGGCGG TTTTTTTGCTTGGGG 100 214
APT56_RS06290 1405283 .. 1405311 +    -3  -3.17723   GTAATAACGGCGGCG       CGCCGGCTGGACT GAGG GGGCCAG-CGCCG        TTGCCTTCGGCATCC  45 147
APT56_RS06295 1407411 .. 1407430 + -16.4  -5.45652   CCGTTTTCCCGCAAA            CCGCCGGC TTTC GCCGGCGG             TTTTTTCTTGCCCGT 100 117
APT56_RS06300 NONE
APT56_RS06305 NONE
APT56_RS06310 1413283 .. 1413312 +  -6.9  -3.14564   CGCAGTCGCCCGCGC       CCGCGCCGGCCGG CTGA CTGACGGGCCCGG        TTCGTGGCACCATAA  51 9
APT56_RS06315 1414047 .. 1414101 +  -7.7  -3.31144   ACCCCGTAGCGTCAA GGC-CTGGCCGCGTCAGGACGCCGGCG ATG CGCCGTCGTCCC-ATCCCCCCAGCGCC TTGTACAGATCCACC  58 57
APT56_RS06335 NONE
APT56_RS06340 1421654 .. 1421698 +  -9.7  -2.89564   CGTTCCCGCGTCCGC AAGGCGGTCGTCTGGCGCGTG GTT CGAGCGCCTGACTGCCGCCGC TCTATACAATCGCCG  58 61
APT56_RS06345 1423381 .. 1423402 + -17.3   -4.9755   GCATCGAGCCAGACG           CGGGACCCG GTGA CGGGTCCCG            TTTTTACTTGTCTCT 100 41
APT56_RS06350 1425256 .. 1425309 +   -21  -2.72511   GCCTACGCGGTCGGC CGCTGAGCCGCGTGCCGGCGCGC-CC GCCC GGCGCGCGCCGGCACG-GTTGCGGCG ATTTGCCGCCATGGG 100 20
APT56_RS06355 NONE
APT56_RS06360 NONE
APT56_RS06365 1428095 .. 1428116 +  -6.5  -2.62983   CGGTCGATTTCGCGT           TCGCGC-GGC AGG GCCAGCACGA           TGGTGTCGGACTCCG  45 222
APT56_RS06385 1430983 .. 1431000 + -12.7  -5.95539   GGCCCGCTCATATAA             GCCACCC TCAG GGGTGGC              TTTTTTTATTTGGGA 100 95
APT56_RS06390 1431697 .. 1431711 +  -6.4  -3.72576   GCGCTGGACTGGGAA               TGACCC GCC GGGTTA               TTTCATCACCGCACG  62 23
APT56_RS06395 NONE
APT56_RS06400 NONE
APT56_RS06405 NONE
APT56_RS06410 NONE
APT56_RS06415 NONE
APT56_RS06420 NONE
APT56_RS06425 NONE
APT56_RS06430 1440028 .. 1440042 +  -4.2  -4.13282   ACCGTTGAGCCCAGG               GTCCTG ATC CATGAC               TTTTACCACTGTCCT  62 33
APT56_RS06435 NONE
APT56_RS06440 NONE
APT56_RS06445 NONE
APT56_RS06450 NONE
APT56_RS06455 NONE
APT56_RS06460 1446406 .. 1446421 + -11.8  -5.07652   CACGCACCGCATAAA              CGCCCC GCAA GGGGCG               TTTTGTTTTGAGGCC 100 52
APT56_RS06465 1448845 .. 1448861 +  -9.4  -3.55444   CTGGCAGACAGGAAA              GCCACC TTCGC GGTGGC              TTTCCCGGGTGGCGC  65 47
APT56_RS06480 NONE
APT56_RS06485 1454481 .. 1454503 +   -12  -5.44119   CCTTGCCTGAATCGA           TGGCGCGG GTGTTCA CCGCGCCA           TTTTTTTGGCGTGCC 100 55
APT56_RS06490 1456840 .. 1456883 + -25.6  -3.53012   CAACGACCGCCCCGC CAATGCAAAAGCCCGCCTGT TCGC ACAGGCGGGCTTTTTCATTG TTTCGCGCGAAGGCG 100 60
APT56_RS06515 NONE
APT56_RS06520 1462637 .. 1462666 +  -7.1  -4.07568   GCAAGACCTGAAGCT       GGCCT-CCCGCC AGCTGTA GGCGGGAAAGCC       TTTTCCCGGCGGCGC  68 7
APT56_RS06530 1467908 .. 1467920 +  -5.5  -3.57792   AGAATGGCGCCGGCT                TCCTG GCG CGGGA                TTTACACATGAGTGA  57 52
APT56_RS06535 NONE
        ligA 1471135 .. 1471163 + -18.1  -4.54727   CCTGGCCCTGTCGAA        CAGGCCGTCCGCC CCT GGCGTGCGGCCTG        TTTTCATTTCCGGCG 100 69
APT56_RS06550 1472639 .. 1472652 +  -3.8  -4.18018   CCCAGGCGGCGTCCG               GCAG CTGGAT CTGC                TTTTCCATCAGGCGG  63 340
APT56_RS06565 NONE
APT56_RS06570 NONE
APT56_RS06575 1475346 .. 1475356 +  -8.2  -3.60475   AATCCCCCAACTGAC                 GCCC GAA GGGC                 TTTCAAGTACAAGTT  65 67
APT56_RS06580 1476765 .. 1476789 +   -15  -2.66787   GGGCGCCCCATGCTT          CGCACCGGCC TCTCC GGCCGGTGTG          TCGTATCAGTGTTCC  75 77
APT56_RS06585 NONE
APT56_RS06590 NONE
APT56_RS06595 1480635 .. 1480661 + -12.3  -3.19157   CCAGACGTCGTAAGG         GCCTTCGCCCT CGGCC ACGGCGAAGGC         TTCGTCCACTTCGTC  68 174
APT56_RS06670 NONE
APT56_RS06675 1496021 .. 1496042 + -17.3  -5.48825   CGCGCCTGATGAAAA           GCCCTCCGG CATG CCGGAGGGC            TTTTTTTGGGTCGTC 100 47
APT56_RS06690 1500129 .. 1500146 +  -9.1  -3.13403   CGTAGTAGGCCGGCG             CCATCGG CGAA CCGGTGG              TCTTGATCAGCCAGG  56 250
APT56_RS06700 1502725 .. 1502739 +  -4.2  -2.71712   CGTCAGGTAAAATGA               CGGGTT GCA AACCGG               ATTTGCGGGCGGCAG  42 115
APT56_RS06705 NONE
APT56_RS06710 1504840 .. 1504868 +  -6.7  -3.34344   AAGTAAAACGACCGA       G-CGCGTC-GGCC TGAGC GGCCTGGCGCGAC       TTCCTTACGGGATGA  55 12
APT56_RS06715 1505815 .. 1505837 + -11.3  -5.14965   GCTAAGATGAAAAAG          CCGCCGCGCA TTCG TGC-CGGCGG           TTTTTTCATGGCCGT 100 71
APT56_RS06720 1506617 .. 1506632 + -10.4  -6.06723   GGCCTGACGAAAGAA              CCCTCG GTGA CGAGGG               TTTTTTTTTCGGCCA 100 55
APT56_RS06730 NONE
APT56_RS06735 1512001 .. 1512025 +  -4.2  -3.16475   GTCCGGGCGGGGCAA          TCGGGCGG GAACGCCGG CAGCCCGA          TTGGGTCTATCGCTG  45 53
APT56_RS06740 NONE
APT56_RS06745 1513996 .. 1514043 + -14.1  -2.60075   GGCGCGCCAGATGCG AGGCGGCG-CCGGCTTC-GTCGT ACCA GCGGCCGATGCCGGCCGCCGCCA GTTGCTTCCACGGGA  66 254
APT56_RS06765 1516692 .. 1516719 + -11.2  -3.88291   GATTGAGATCAACAT        CGGGCCGCATCG CGTA CAATGCGCCCCG         TTTCTAGGAGTCATC  79 35
        rpmF NONE
APT56_RS06775 1518024 .. 1518040 +  -4.4  -3.18264   GCGCTTGAATCGGGC             GCGGCTG GGGA CA-CCGC              TTGATGGATACCGCA  47 5
APT56_RS06780 NONE
APT56_RS06785 NONE
        fabG 1520844 .. 1520881 + -14.8  -3.14132   GGGCGGCCCAGGCCG   CCGCGCCGCTGCCGGGC AACCG GCGCGGCACCG-CGCGG   TTCATCCGGAAACGC  80 55
APT56_RS06795 1521360 .. 1521387 +   -17  -3.12327   CCGTGTGGTCCACGC        GCGGGAAGGGCA TTGA TGCCCGTCCCGC         TGTTGCGTGTGCCGC  85 118
APT56_RS06800 NONE
APT56_RS06805 NONE
APT56_RS06810 NONE
APT56_RS06815 NONE
APT56_RS06820 NONE
APT56_RS06825 1526945 .. 1526969 + -17.1  -4.56775   TGGCTGGTTGCCGCA          AGAGGGGGCGC CTG GCGCCCCCTCG          TTTTTGCCCGGCCCT 100 60
APT56_RS06830 NONE
APT56_RS06835 1529821 .. 1529831 +  -3.2   -2.7094   CTCAGCCGCATCGGC                 CGGT TCA ACTG                 ATTATGTCGCTAGCC  40 14
APT56_RS06840 NONE
APT56_RS06845 NONE
APT56_RS06850 NONE
APT56_RS06855 1533487 .. 1533505 +  -3.1  -3.24017   GGCAGGCCGCAGCGG             TCGAACA ATTCC TGTGCGA             TTGGCTTGTAGCCTT  43 513
APT56_RS06905 1543295 .. 1543314 +  -9.2  -3.61398   TCATCGTGCCGCGCT            TGCCGGCC AGCA GGTCGGCG             TTCTTCAGCACCGAC  63 174
APT56_RS06915 NONE
APT56_RS06920 1547173 .. 1547219 +  -9.7  -4.37199   ATGCGCTGAAAGAGG GACGCCTTGTCCTA-AGCTTAT ATTA ATAAGTTATATAACAAGGCGTC TTTATTACTTATAAT  83 32
APT56_RS06925 1548227 .. 1548252 +  -7.6  -5.45652   GGCGTGTCGAGCCAA         GGCGGTTCTTC GTTCG GGAGA-CCGCC         TTTTTTCTTGCCCGT 100 48
APT56_RS06930 1548837 .. 1548876 + -25.2  -2.91264   GCCGCGAAGAGGAAT  GAAAAACGCCGCCGGACT GGCA AGTCCGGCGGCGTTTTGC   TGTCTGGATCAGGCC 100 103
        prpE NONE
APT56_RS06945 NONE
APT56_RS06950 1553716 .. 1553734 +   -11   -4.1899   CGCGTTCCCGCGGGA             TACGGGCT TAT GGCCCGTA             TTTTGCGTAAGGTGC  81 172
APT56_RS06955 1555879 .. 1555917 + -24.1  -5.26875   GACGGGAGCATAATG  CGA-GATGCCCATGCCGG TTTG CCGGCATGGGCATCGTCG   TTTTTTCCTTCGCCA 100 90
APT56_RS06960 1556867 .. 1556881 +    -5  -3.80862   AGTACCGGATTCCAT               TTTCCT CCA AGGAAG               TTTCATGATCGATTT  58 52
APT56_RS06965 1557905 .. 1557930 +  -9.6  -2.78816   GGCCTGATGGCGCGC         GCGTGGCCGC GCCCGG GCGGCCGCGA          TGTCCTGCGCGATCA  58 34
APT56_RS06990 1562650 .. 1562674 +  -2.1  -3.53811   GCGGTCCGACTTCGA         TGCGG-CGTT TGAAAC GGCGCCCGCA          TTTGGCGGCCATGCC  47 55
APT56_RS06995 NONE
APT56_RS07000 1564306 .. 1564321 + -11.8   -4.8622   AGGCATCATGAATAA              CGCCCC GCAA GGGGCG               TTTTTCATTGAGGGC 100 51
APT56_RS07010 NONE
APT56_RS07015 NONE
APT56_RS07020 NONE
APT56_RS07025 1570479 .. 1570505 + -15.8  -3.03635   CTTGCAAGGCCACAT         ACGGCGGGGACG CGG TGTCCCCGCCGA         TGTTGCAGGAATTTC  81 75
APT56_RS07030 NONE
APT56_RS07035 1572437 .. 1572483 +  -7.1   -4.3208   CCGCCGCCCGCGTTC GGGCGCCCGCCT-CGCGG-CGTG CGC CACGGCCGCGCGGGACGGCGGCA TTTTGCATTCTGGAG  72 110
APT56_RS07040 1573599 .. 1573609 +  -2.4  -2.61264   TGGCGCCAATGGCTG                 GCGG ACA CCGA                 ATTCTGAATCCCACC  38 8
APT56_RS07045 NONE
APT56_RS07050 1576363 .. 1576377 + -12.8  -4.54821   CCTGCAATGACAAAA               GGCCCC AAC GGGGCC               TTTTGTCATTGCGCT 100 50
        pyrG 1579283 .. 1579329 + -25.1  -3.62046   AGGGGGCGTAATGGC GGTCGGCGGCACCGAGCCGCGC ATTT GCGCCGCCCGG-GCCGCCGGCC TTATTCCCGCCGTCG 100 30
APT56_RS07065 NONE
         eno 1581090 .. 1581111 + -18.7  -3.61398   GCGTTAATGTAAGCG           GGCCGCGGC ACGC GCCGCGGCC            TTGTTAGCGCCACGA  93 34
APT56_RS07075 1582060 .. 1582077 + -10.5  -3.05384   GTCGGCGTGTCCGGT             GCTGCCC GCGC GGGCGGC              TTCCATCAGGGCCAA  59 508
APT56_RS07155 NONE
APT56_RS07160 NONE
APT56_RS07165 NONE
APT56_RS07170 NONE
        sdhB 1601941 .. 1601967 +  -3.6  -3.97308   GGCAAGATCAAGGAA         CTGATGGTCCGT CGC ACGGTCTAGTAG         TTTGGTGTATTTAAG  58 2
APT56_RS07180 1602234 .. 1602250 +    -3  -2.60075   CGCGGCATCATCGGC             CAGATGC GGTC GC-TCTG              ATTAATTGAGAGGAA  39 8
        gltA 1603607 .. 1603620 +  -9.5   -5.4505   CGCTTGACCAGGAAA               CCGCC TTCG GGCGG                TTTTTTGTTGGCCGC 100 51
APT56_RS07190 1604968 .. 1604986 +    -8  -3.34398   GGCGTCCGGCACGAA             GGCGGGCT GCT GGCGCGCC             TGTTTGGCCCAGCGC  55 174
APT56_RS07210 1613063 .. 1613088 + -20.5  -5.14965   CGCGTGGCGGTCAAA         GGGCATGGCGC GTTG GCGCCATGCCC          TTTTTTCATGCGGCT 100 47
APT56_RS07235 1618933 .. 1618947 + -11.4   -4.8622   ACGGATCGAAAAAAA               TGCCGC AAT GCGGCA               TTTTTCGTTCGCGGA 100 67
        sucA NONE
APT56_RS07245 1623457 .. 1623514 + -11.2  -3.67296   CGGCGCCCGCGCGAC CTGTGTGTCGGCGGCGCCCG-GCCGGCCC CAC GGGCCGGCTCGCGCGG-GCCGGGGCG-AG TTTCACTCCCTCCTC  74 58
APT56_RS07250 1625000 .. 1625021 + -13.7  -5.56673   CGGCTCTGCCAAAGG           GGGCGGGTT TTCG GACCCGCCC            TTTTTTCTTCTGCCT 100 53
APT56_RS07255 1626143 .. 1626180 + -10.5  -3.74224   GTAACGTTGTAGTTA   TGCCGCAAGCGTCCGCCC GCG GGGCGGACG-TGGCGCAA   TTTGCGTCATTTGCA  74 29
APT56_RS07260 NONE
APT56_RS07265 1627852 .. 1627865 +  -3.7  -2.71731   CCGCTTCATCTTGCC               CGCGC CTGG GCGCA                TCGTTGACCGCTGGC  42 135
APT56_RS07270 NONE
APT56_RS07275 NONE
APT56_RS07280 NONE
APT56_RS07285 1633066 .. 1633104 +  -8.7  -3.51825   CCAGGCCCAGGCCCA  GGC-GCGCCGCC-GCGCCG CCA CCGCGCTGGAGCCGCCGCC  TTCTCCTTCCGATGC  62 58
APT56_RS07290 1633575 .. 1633596 +  -8.1  -3.22298   CGGCACGTTACACTG           GGCGTTT-CT CCA AGCAAACGCC           TTCATCGTCCATGAA  57 132
APT56_RS07295 1635001 .. 1635029 +  -6.7  -5.00616   CTCTCTTGCGTGATG       GAATCGCCCGGC CCCTGT GCCGGGC-ATGC        TTTTTTCAGCGACGC  91 67
APT56_RS07310 1640573 .. 1640594 + -15.9  -4.62336   GCCAGCCAACAAAAA           GCCCCTCGA TTGC TCGAGGGGC            TTTTTCCCATGCGGT 100 64
APT56_RS07320 NONE
APT56_RS07325 1643288 .. 1643299 +  -3.6  -3.14132   GGCATTGCTGGCCTG                GCTG GATC CGGC                 TTGATCCCGCGCAAG  43 10
APT56_RS07330 NONE
APT56_RS07335 NONE
APT56_RS07340 1646597 .. 1646620 +   -16  -4.94058   GTCCGACCCTTGTCA          GCCGGCGTGGC ATT GCC-CGCCGGC          TTTTGTTTGGCTTGA 100 66
APT56_RS07345 NONE
APT56_RS07350 NONE
APT56_RS07355 NONE
APT56_RS07360 1650032 .. 1650069 + -12.7   -3.8709   CCGCGCGCGGAAAAT   ATCACGCGCCGTTGC CCGCATCC GCGGCGGCGCGTGAA    TTTGTACGACCATTT  86 84
APT56_RS07365 1651926 .. 1651944 +  -3.7  -3.14132   CGCCGTCATCCTTTG             GGCCGTC TGGTT GGCGGGC             TTGATCACGCCAGGC  45 85
APT56_RS07370 1662415 .. 1662433 +  -8.1  -2.70932   CCTGGCCGGCGCATT            GGGCAGCG GCAC CGC-GCCC             TACTTGGCGACCGGA  51 485
APT56_RS07380 1664971 .. 1664999 +  -3.7  -3.14132   GATAGCATTGAGCGC        GGCCGGCCCATTG CGA TAAAGTGTTGGCC        TTCCTCCCCACGGCA  45 365
APT56_RS07385 1666021 .. 1666048 + -19.2  -4.88407   GCGCGCAATGAAAAA        CGGCGCCTGTGT GTGA GCACAGGCGCCG         TTTTTCATTGCATGG 100 144
APT56_RS07410 NONE
APT56_RS07415 1675915 .. 1675941 + -12.3   -4.6821   AGTGCGCCGACCAGG        TGG-GCGTGGGC AGCA GCCCGCGCGCCA         TTTTGTGTTCCCCTT 100 170
APT56_RS07425 NONE
APT56_RS07430 1678584 .. 1678598 +  -4.2  -3.04144   TGAAAATCCGCTATA               CCGC GTCCCTG GCGG               TCTTCGCCCTGGCGC  44 38
APT56_RS07435 1679842 .. 1679852 +  -2.4  -2.84732   TGACGGTGTCCGCCG                 CGCC ATG GGCC                 TATACTGGATTTCCG  40 103
APT56_RS07440 NONE
APT56_RS07445 1681712 .. 1681745 + -10.9  -3.18582   CGAGCGAGGCCCCGG     CGCGCAGTGCGATCGC CAG GCGTTCGCGC-GCGAG     TTCCTGCGTCAGGTA  64 427
APT56_RS07505 1697960 .. 1697983 + -13.9  -3.59262   CCGCCAAAAAAAAAA          TGGCCGACC CGTGAA GGTCGGCCA           TTTGGCGCTATGGCG  84 88
APT56_RS07535 NONE
APT56_RS07540 NONE
APT56_RS07545 NONE
APT56_RS07550 NONE
APT56_RS07555 NONE
APT56_RS07560 1710822 .. 1710835 +  -3.7  -4.19817   TTGGCGTAGCGACCA               CGGGC TCCG GCCCA                TTTTCCCTACATGAC  62 32
APT56_RS07565 1711755 .. 1711784 +  -7.1  -4.57341   GCAGGTATTTTGACT       C-CACTGTGGCGGG CAA TCCGCTGCGGTGTG       TTTTTAACGGCCATT  79 245
        rpsA NONE
APT56_RS07575 1713942 .. 1713971 + -19.5  -4.66833   GGATCGGACCGCGAG       CAAAGCCCCTTGA GCAA TCAAGGGGCTTTG        TTTTTGGGCTTCCCG 100 69
APT56_RS07580 1714406 .. 1714427 +  -3.6  -4.66535   TGTCGCCGCTGTGAC           GGCGCCGCG CCATC CGCAG-GCC           TTTCTTTTCCGCATT  72 27
APT56_RS07585 NONE
APT56_RS07590 NONE
APT56_RS07595 1717649 .. 1717666 +  -9.8   -5.4833   GGGGCGGGGTAAGAA             GCCGCC GCGACA GGCGGC              TTTTTTCTTGCCTGC 100 67
APT56_RS07600 1718355 .. 1718368 +  -3.7  -4.07568   CTGTGTTGAACCCCT               GGCGC GAGC GCGGC                TTTTGGCGGCGCCCG  62 172
APT56_RS07605 1719386 .. 1719441 +  -6.1  -3.63694   CCCGGAACCGTCCGG GGCGTGG-GGCG-TTCGCGTCG-AAGGC CCG GCCATGTGGCGCGGGCCGTCGCCAGGCC TTATTCGGGCTGGAT  57 89
APT56_RS07620 1722523 .. 1722548 +  -2.4  -3.86252   CGGCCAGGTCGGCCA         CCGCGGTGGC ATAGAA GTAGCTGCGG          TTGTATTTCGTCAGG  56 236
APT56_RS07630 1724596 .. 1724624 + -16.7  -4.53439   AAATTGTGCAATGCG        ATCCCGGCGGGTC GTT GATCCGCCGGGAA        TTTATTTCCATTTGG 100 51
APT56_RS07635 NONE
APT56_RS07640 1726360 .. 1726386 + -20.2  -5.45652   GCGTTAATGCCAAAA         GCCCGCGGACAT TAT GTGTCCGCGGGC         TTTTTTATTGCACCT 100 55
APT56_RS07645 NONE
APT56_RS07650 NONE
APT56_RS07655 NONE
APT56_RS07660 1733909 .. 1733943 + -10.7  -4.56597   GTTTGATGGAAGAAT    CGTTTCCAGGGGCGGC ACAG GCCGCCGCCG-AAACG     TTTTTCAGGCCGGCC  89 74
APT56_RS07665 1734723 .. 1734749 + -18.8  -4.56597   CCAGCCATCCGTAAA         GCCGCGTATTCC CTG GGAATGCGCGGC         TTTTTCACAGGGGGC 100 93
APT56_RS07670 NONE
APT56_RS07675 NONE
APT56_RS07680 NONE
APT56_RS07685 NONE
APT56_RS07690 NONE
APT56_RS07695 NONE
APT56_RS07700 1741856 .. 1741885 +  -6.9  -4.77216   TCGGTAAACCGCAAG       TCGGGGCGGGAAG ACTC CGCCCCGCACCGG        TTTTTGGGTGTTGTT  84 34
APT56_RS07705 1743501 .. 1743519 + -10.2  -3.28984   GCCCACGGGTTGCCG             CCGTGGCG AAT TGCCGCGG             TTCCTGATTGCGTTA  65 51
APT56_RS07710 1744053 .. 1744081 + -15.3  -3.59979   ATCCAGGCGCTTCAC       GC-CGCCGGCCC GCGCGA GGGCCGGCGCGC        TTTCAGCTCGAACCC  87 75
APT56_RS07720 1745661 .. 1745678 +  -9.1  -5.93252   TTTCCGGGTTAAAAA             GGCACCT GCGA GGGTGCC              TTTTTTCTTTTTGAA 100 110
APT56_RS07725 1746590 .. 1746622 +  -4.8   -3.4072   CCGGGAGGCCGCCAA     CC-GGCGGCTCAATA CCGC TGTTGTCCCGCCAGG      TTCTCGTCCAGGATG  51 183
APT56_RS07740 1749434 .. 1749475 +  -4.2  -2.64794   GAAGGTGTAAGCCGC CGCCGAGC-CGGCGGCGCCC GCCA GCGAGCCGCCATGC-CGTCG TCCTATCCCGTTGCC  41 31
APT56_RS07745 1750464 .. 1750481 +  -2.5  -4.57569   GGCGTCCGACGGCGA             CGGCGGG ATCT CCAGCAG              TTTTTCCAGCGGTCC  71 393
APT56_RS07755 NONE
        paaB NONE
APT56_RS07765 NONE
APT56_RS07770 1753945 .. 1753957 +  -4.1  -3.55444   CGATTACTTCAAGAC                TCACT GAG AGTGG                TTTCGAGAATGAGCC  51 19
APT56_RS07775 NONE
APT56_RS07780 NONE
APT56_RS07785 NONE
APT56_RS07790 1758065 .. 1758110 + -11.8  -2.52464   CCAACCAGAGACAAG ACCACCGG-CCGAGGCGGGCGCG CGG CGCGCCC-CC-CGGATCGGAGGA TGCATTCCAGGAGAG  64 50
APT56_RS07795 1759512 .. 1759527 + -10.4  -5.40474   ACCGCCATGAAAAAA              GCAGCC CTCG GGCTGC               TTTTTTTCGCGCCGT 100 87
APT56_RS07830 NONE
        ispH NONE
APT56_RS07840 1768324 .. 1768334 +  -6.8  -3.33696   GGCACGCCGCCCAGC                 GTCG CCA CGAC                 TTCCTTGGGCGCGCC  52 406
APT56_RS07865 1772081 .. 1772106 + -19.1  -4.77757   GAGCCAAAGAATTCA         GGGCCACTCAC GCAA GTGAGTGGCCC          TTTTGGTTTTTCGCG 100 35
APT56_RS07870 NONE
APT56_RS07875 1774739 .. 1774761 +  -4.7  -2.78816   CCCGCCGTCGCTCCA           GGGGCCTGA AATGG TCCGGCACC           TGTCCTGCAAGGTGC  45 41
APT56_RS07880 1776098 .. 1776115 +  -7.7  -4.19276   GCGATCCGCAGGCGT             GTTGGCA TATT TGCCAGC              TTTTCCAGATTTTGC  71 389
APT56_RS07890 NONE
APT56_RS07895 1780120 .. 1780139 +  -9.3  -5.83822   CACTGTGCAATACGG            TGGGCTG GGCGTG CAGCCCA             TTTTTTTTGAGTATA 100 396
APT56_RS07900 NONE
        nusA NONE
APT56_RS07910 1785285 .. 1785296 +  -2.2   -3.4072   ACGCTGTAAGGCGTC                GCGA GGCA TTGC                 TTCTAATGAGCCGTC  45 32
APT56_RS07915 1785708 .. 1785721 +  -2.3  -4.06903   ACCAGTCCTGATCGG               GCTGT CGTC ACTGC                TTTAATTTCCGGATT  57 30
        truB NONE
APT56_RS07925 1788356 .. 1788381 + -12.5  -5.63103   CTGGCAATCGGAAAA         GCCGCACATCC TTCG GGGTGCGCGGC          TTTTTTTCGTTCGGG 100 69
APT56_RS07935 1790248 .. 1790283 +  -2.4  -3.01712   TCAGCCGCCAGAAGC    GGATG-GGCTGGCGTGG CCA CAACGACGGCGGCGTCC    TGTTGCAGCGGGACG  41 421
APT56_RS07945 1791930 .. 1791969 + -12.8  -2.62263   GCTTGACGAGTAAGC  GTTGCAC-CGCCGGTGGCG TGT CGTCGCCGGCGCGGGCAAA  TCCTGTAGAACCGAT  67 28
APT56_RS07950 1793476 .. 1793500 + -11.3  -2.87132   GGGCCGCCCGGCGTA          TGCCGGTCCAC GCC GCGGGCCGGCG          TGTGTCAGGCCGGCA  64 66
APT56_RS07960 1796965 .. 1796991 + -12.2   -5.1417   CACATCAGGGGGCCG         TAGGCCGTCCGT CGC GCGGGCGGCCCA         TTTTTGCTTTTATGG 100 53
APT56_RS07965 1797964 .. 1797981 +  -9.1  -3.18264   GCCCTGAAGGCGAGC             CGCGGGA TCGG TTCCGCG              TTGATCCCTACACAG  62 95
APT56_RS07970 1798825 .. 1798846 + -11.5  -5.77853   CTGGGCGTGATGAAG           CCGCTGCGC GTTT GCGTGGCGG            TTTTTTTTGGCGATT 100 56
APT56_RS07980 1802818 .. 1802839 + -14.5   -4.8622   CGCCCCCAACAAAAA           GCCCCTTGA TCGC TCAAGGGGC            TTTTTCATTGCCGAG 100 49
APT56_RS07990 NONE
APT56_RS07995 1805808 .. 1805821 +  -2.3  -3.56643   CGCAGCCAGCTTGAC               CCGTC CGGA GACGC                TTTCGGCGATCTCCA  50 122
APT56_RS08010 NONE
APT56_RS08015 NONE
APT56_RS08020 NONE
APT56_RS08025 1812346 .. 1812385 + -13.4  -2.66232   GGCGGCCACGCCGCC  GCGGCAGGGGAAGCGCCC GGGC GGGCGCTTCCCGCGCAAC   CTCTTTGCCTCGTTT  68 53
APT56_RS08030 1813560 .. 1813579 +   -15  -4.27316   CCCGGCAAAAAGAAA            GGGCTCGC GATC GCGAGCCC             TTTTGCGTTGGCGGA 100 49
APT56_RS08050 1818356 .. 1818379 +  -7.3  -2.71268   GCCTCTGCCTGAGCG          TGGCGGCGC ATCGGG GCGCGGCCG           TGGTATCTCGTACAA  51 29
APT56_RS08055 NONE
APT56_RS08060 NONE
APT56_RS08065 1821553 .. 1821564 +  -7.2  -3.78022   GCGCGTACCCACGGA                CCGG CCCG CCGG                 TTTGGTCCGTGTGGC  62 43
APT56_RS08070 NONE
APT56_RS08075 NONE
APT56_RS08080 NONE
APT56_RS08085 1824445 .. 1824458 +  -9.5  -3.35996   CAGGGAAGGGCAACG               GGCGC GAGA GCGCC                TTCTGAATACGGATA  64 41
APT56_RS08090 NONE
APT56_RS08095 1825304 .. 1825321 +  -9.8  -5.95539   CGCGGTAGAAAAAAA             GCCGGC CCGCGC GCCGGC              TTTTTTTCTTTGCGC 100 50
APT56_RS08100 NONE
APT56_RS08105 1827674 .. 1827693 + -16.4  -4.77036   CTGGCCAGAAAAAAA            GCCGCGCC CGAG GGCGCGGC             TTTTTCATGCTGGCG 100 55
APT56_RS08135 1831787 .. 1831799 +  -3.3  -5.13137   CCTTGGGATAGCGCG                GGCAT AGA AAGCC                TTTTTCCTTTATTTA  86 83
APT56_RS08140 1832542 .. 1832557 +  -6.8  -3.04144   CGGCTGGGCGCGGAT              CCGCTG GACG TAGCGG               TGTTCGCGGTAGCGC  48 376
APT56_RS08155 1834739 .. 1834756 +  -2.7  -2.90392   CCTCGGTGCGCTGCA             CAACATT TCAA AATGATG              TATGATTCACACATC  40 10
APT56_RS08160 1834919 .. 1834936 + -12.7  -5.86061   GCCCAGTAGAAAAAA             CCGCGAC GCTC GTCGCGG              TTTTTTTTCGTCCCA 100 93
APT56_RS08165 1835540 .. 1835555 + -10.4  -5.60993   GCAGCGATAAAAAAA              TGCCCC GCGC GGGGCA               TTTTTTTATCCGACG 100 143
APT56_RS08170 1837326 .. 1837341 +  -2.6  -3.21925   CAGGCGGAGAAACTC              TAC-GAC ATT GTCTGTA              TTCATACTGCGGTCT  43 388
APT56_RS08185 1838103 .. 1838139 + -12.4  -4.57073   CCCGGGCGCGTTCAG   GGCCACG-CGGAAATGT TGCG GCATTTCGGGCGTGGCC    TTTTTGCGGCCGCTG 100 62
APT56_RS08190 NONE
APT56_RS08195 1839078 .. 1839110 +  -3.5   -2.9039   CAAAAGTGTTGGACA     TGCACTGGCGCA GGGAATAATA TGCGC-AGTGCG      TATATAAACTCCTCT  41 65
APT56_RS08200 1840510 .. 1840545 + -15.6  -3.08679   AATCCGCGCTGGTTT    TTCCCGCCGCGTGTC GTTCCGA GACACGCGG-GGGAA    TCTTCGGTCGGAAGG  82 103
APT56_RS08205 1842224 .. 1842244 + -11.1  -3.34013   CTTCTCGTCGTCATT            GGCGGCGAC GGT GTCGTTGCC            TTCCTTGAGCACGTC  66 272
APT56_RS08215 1843403 .. 1843422 + -16.4  -5.40072   CCCCGGGAAACCGGA            GGCGGCCG CTTG CGGCCGCC             TTTTTTTGCGCCGGC 100 49
        recA 1849351 .. 1849366 +  -6.8  -2.52464   GGGCTCGCCAGCCCG              GCC-GCC AGC GGCAGGC              TCCCTTACCGGGAGA  47 69
APT56_RS08240 1850157 .. 1850188 +  -4.2  -3.58899   CCTGAGCGGACCGCG      CGGCGAAGGCCGGT GCCG GCCCGCCCTTGCCC       ATTTTTCCTGTTTTT  53 36
APT56_RS08250 1853651 .. 1853685 +  -8.5  -5.08824   GCCGGCAATCCGGAA     CCCCTGTGTTGCGTG CGGGA TGCACACCACAGGGG     TTTTTTGCGTCCGGG 100 75
APT56_RS08255 1857749 .. 1857786 + -10.4  -4.11216   CGCTGAGCCGGCGGA   CGCCCGCC-CGCCGGCC GCCGG GGCGGGCGCGGCGCGCA   TTTTGACGGTCGGGG  79 35
APT56_RS08260 NONE
        sucC NONE
APT56_RS08270 1860581 .. 1860598 + -14.1  -5.63103   TGTGCGCATGAAGAA             GGCCCGC CTCG GCGGGCC              TTTTTTTCGTTCCAG 100 44
APT56_RS08275 1861562 .. 1861580 + -13.1   -4.7261   CCACGGCGGCGGGCT             GGCCGGC ACGGG GCCGGCC             TTTATTTTGATAAAT 100 79
APT56_RS08280 1862359 .. 1862384 +  -4.8  -3.21416   CCCAGCAAACCGAAT        CAGG-CCTG-AG CCTC CTGCAGGGCCTG         TTCGTGCTGGCCATC  49 52
APT56_RS08285 NONE
APT56_RS08290 NONE
APT56_RS08295 NONE
APT56_RS08300 1867041 .. 1867063 +  -3.5  -2.84801   CCACCAAGCCGCCGT          TCAAGGACGA CGGC TCG-CTTTGA           TCCTCTTTCAGACTG  41 3
APT56_RS08305 1867669 .. 1867710 + -28.1  -3.65812   GCGGGCGCCTTCAAG CGGCGCGGCCGCGA-CGGCA TGA TGCCGATCGCCGCCGCGCCG TTGTCTTGCAGGCCC 100 72
APT56_RS08330 NONE
APT56_RS08335 NONE
APT56_RS08340 NONE
APT56_RS08345 NONE
APT56_RS08350 NONE
APT56_RS08355 NONE
APT56_RS08360 1876553 .. 1876574 + -14.5  -5.27335   CCGTGTGGAAAAAAA           GCCCCTTGA TCGC TCAAGGGGC            TTTTTCTTTGGCCGG 100 49
APT56_RS08380 1880951 .. 1880975 +  -5.6  -3.89346   CGGCGGAGCCGGATC         CGCGGCATCCC GATC GGGGGGC-GCG          TTTGTGGACTGCAGC  62 94
APT56_RS08385 1882342 .. 1882354 +  -3.3  -3.59979   CCAAGGTCACGCGCC                TGCGC GTG GAGCA                TTTGGCATGAGGAAG  51 3
APT56_RS08390 1883927 .. 1883952 + -18.3  -5.40004   TGTATGGGGTTGCAA         CCCCTCGCGGT GTGA GCCGCGAGGGG          TTTTTTACTTTCATA 100 55
APT56_RS08395 1884301 .. 1884320 + -16.4  -5.06414   TCCCGACGAAAAAAA            GCCCCGGC TCAG GCCGGGGC             TTTTTGTTGGGCGAA 100 54
APT56_RS08410 1888903 .. 1888931 + -20.5   -5.1356   GCAAGCCAAAAATAA        TAAAGGCGCACCA CAA TGGTGCGCCTTTA        TTTTTCTTACTGAAA 100 60
        tldD 1891767 .. 1891786 +   -15    -5.626   ATCCCCCCCAAAAAA            GCCGCCAG CGAA CTGGCGGC             TTTTTTTGTGCCGTC 100 223
APT56_RS08425 1892950 .. 1892965 +  -4.6  -3.53012   CGCAACGGCCGCGAG              CCGTCC AGGC GGACGC               TTTGCGGCGCAGCAA  53 43
APT56_RS08430 1894466 .. 1894487 +  -9.3  -5.42259   GGGCGCAACGAAGAA           GCCGGCGGG GCGA TCCGCAGGC            TTTTTTTCGGCCTCA 100 52
APT56_RS08435 NONE
        glcE NONE
        glcF 1899042 .. 1899059 +  -4.7  -4.58283   CGCGTACTTGACCGT             CACGCCG CGCT CGGTGAG              TTTTTCGGCCAGTTC  75 511
APT56_RS08475 NONE
        mnmA NONE
APT56_RS08485 1907168 .. 1907187 + -10.6  -4.41494   TCCATTCGGGGCTGC            GCTGCGCC TCGG GGCGCTGC             TTTTCCTTGACGATG  84 348
APT56_RS08495 1909064 .. 1909086 + -20.6  -4.06611   GCGGTATAGTCGCCT           TGCCGCGCGC GGC GCGCGCGGCA           TTCTTGTTGTACTTA 100 32
APT56_RS08500 1909609 .. 1909636 + -18.6  -4.10429   GCATCCGCCGCATGC        GAAAAGCCCCTC GAAC GAGGGGCTTTTC         TTTTGGCGCGTGGTT 100 62
APT56_RS08520 1912729 .. 1912753 +  -5.5  -2.98491   CCTGACGCTGCGGGA          GTGAGCGGCCG CCC CCGCGGCTCCC          TGTGTCATATCGATT  48 22
APT56_RS08525 1913657 .. 1913673 +  -9.3  -3.89346   AGGCAATCGAGGGAA              GCGGGGC GGA GCGCCGC              TTTGTACAATGCGGG  73 87
APT56_RS08530 1914949 .. 1914987 +   -18  -3.72576   AAGCCGGCGCCCGGT   GTCCGCGGCGCCGCCTGC CTG GCCGGTGGCGCCGCCAAC   TTTCCTCAAGAGGAG  93 138
APT56_RS08535 1915631 .. 1915670 +  -4.9  -3.72695   GGGGAGGCGGCCGCG  GCCTGTTCGGCGTTCAC GCATCG GTCCAGGTCGAACGGGC   TTTGCTCCGCGGCAT  58 422
APT56_RS08550 1918556 .. 1918576 + -11.1  -5.24129   CACGCAGCAGAAACA            GGCCCGC TCAAACC GCGGGCC            TTTTTTATGAGAGGG 100 110
APT56_RS08555 NONE
APT56_RS08560 NONE
APT56_RS08565 NONE
APT56_RS08570 NONE
APT56_RS08575 NONE
APT56_RS08580 NONE
APT56_RS08585 NONE
APT56_RS08590 NONE
APT56_RS08595 NONE
APT56_RS08600 NONE
APT56_RS08605 1927417 .. 1927429 +  -3.3  -2.68823   CGGCCACTGTGCAGG                CGGCA TTA TGACG                ATTCTATCCACGGCC  40 15
APT56_RS08610 NONE
APT56_RS08615 NONE
APT56_RS08620 1930429 .. 1930487 +  -5.9  -3.08679   GCGGCCGTTGAACAC -CGCCTATCTACCTCGGATTCACGCCTG AGAT TAGGCATGGATCCGGGGGTGAAAAGCGA TGTTGGGTGGCCGCG  49 376
APT56_RS08625 1931391 .. 1931422 + -15.9  -3.30159   GCCGCATTTCCTCGA      GCTGGCGC-CGGCC CAGCT GGCTGCGCGCCAGC      TTCTGCGCCAATTCG  82 88
APT56_RS08635 NONE
APT56_RS08640 NONE
APT56_RS08645 1933871 .. 1933888 +  -3.3  -3.92746   ATACTCGAACATAAC             GAGATGG TTGC CCGGCTC              TGTTTTTGAGGTAAA  56 120
APT56_RS08650 1935685 .. 1935696 +  -3.6  -3.14564   GCGGGTGGCATCCGA                TCGC TGAC GCGG                 TTGATCCCGGCATGC  43 19
APT56_RS08660 1937215 .. 1937229 +    -7  -3.74224   ATATCTTCAGCCAGG               GCTCGG GCC CCGCGC               TTTGAATCGTTTGAA  64 184
APT56_RS08670 1937823 .. 1937838 + -10.4  -5.63103   CCCAATGCCCCCAAA              GCCCTC GAAC GAGGGC               TTTTTTTCGTTCCGC 100 49
APT56_RS08675 1938219 .. 1938242 +  -2.4  -3.05384   CATCATCCTGCTGGC          GCTGTTCT GGCATTGA AGGACGGC           TTGAATCCGCGCCGG  42 124
APT56_RS08680 1939561 .. 1939577 +  -3.6   -3.9654   GTAGGTATTTTTTTC              CGCGTA TTTTT TCCGCG              TATTTTTCCGCTTTG  58 380
APT56_RS08700 NONE
APT56_RS08705 1944794 .. 1944806 +  -3.3   -3.8062   CAGCAGTTCGGCCAG                CGCGT GCA GCGTG                TTCTTGTGGAAATTG  55 359
APT56_RS08730 1950551 .. 1950574 +  -9.4  -5.06816   CCGGAAAAGAAAAAA          CCCCGGACGC TTTC GCGAACGGGG           TTTTTCTTGGCGCAT 100 359
APT56_RS08740 1951584 .. 1951609 + -16.3  -4.31329   AGCGCAAAGCAAAAA         CCCCGAAAATC TCGC GATTTTCGGGG          TTTTCAACTTTTTGC 100 104
APT56_RS08750 1954579 .. 1954611 +  -9.7  -4.04474   TATGGCCGGCCTGTC      CGGCGGCCCGTTCCG CTC TGGGACGGGCATTCG      TTTCTCTAAAGGTAT  75 182
APT56_RS08755 1955356 .. 1955385 +  -4.7  -4.26327   TGTACGAGACCGTGC       GCCAGCGGCAGGC CTGA GCCGGCCGCGCCC        TTCTTTTCGTAGCTC  68 9
APT56_RS08760 1956675 .. 1956701 + -11.5  -3.05384   AGGGATAATCTGGCG        GGGCTCGGCGCG GTGA CGCGCCG-GCCG         TTACCTGCGCAGGAA  66 33
APT56_RS08765 1957431 .. 1957452 +  -4.4  -4.46072   GCCGTGCGCCGGTGT           CGCGCA AACCCCGAAA TGCGCG            TTTATGTTTATTGCG  71 56
APT56_RS08770 1958086 .. 1958115 +   -15  -3.69605   TGATTTGCCGACAGG       TACGCGGTCCGG TATACT CCGGCCCGCGTA        TTGCTTTTGAGTACC  89 78
APT56_RS08775 1958276 .. 1958298 + -11.3  -5.63517   AAGCCGAAACAGAAA          CCCGCACACG GTAA CGTG-GCGGG           TTTTTTGTTTGCGCG 100 46
APT56_RS08780 NONE
APT56_RS08785 NONE
APT56_RS08790 1961290 .. 1961310 + -15.4  -5.02074   AACGATTCCCGCCAA            CGGGGCGC ATTTC GCGCCCCG            TTTTTTCCGGGATCG 100 40
APT56_RS08795 1962164 .. 1962199 +  -5.5  -2.78495   TCCCGTCCCGCTCGC   TTGCGCGGCATCTGGTC ATCC GGCT-GATGCCGC-CGA    TCCTGTTGCTGGTGC  46 177
APT56_RS08800 NONE
        trkD 1965507 .. 1965529 + -16.4   -4.3208   CGATTACGGACTGAG           CACCCGATGA ACT TCATCGGGTG           TTTTGCATTGTAGGG 100 392
APT56_RS08825 NONE
APT56_RS08830 NONE
APT56_RS08835 NONE
APT56_RS08840 NONE
APT56_RS08845 1976835 .. 1976845 +  -2.4  -4.07568   GGTTGGCCGCGGCCA                 CCAG CAC CAGG                 TTTTCCCGGAACAGC  58 465
APT56_RS08855 1978307 .. 1978320 +  -3.7  -2.71712   ACGGCTTCCCGTAGC               CGCGC CATC GCCCG                ATTTCGGGCAACAAG  42 27
APT56_RS08860 NONE
APT56_RS08865 NONE
APT56_RS08870 NONE
APT56_RS08875 1981370 .. 1981387 + -12.7  -5.15634   GCGGATACAAAAAAA             GCAGCCC CACG GGGCTGC              TTTTTTCATGGGCTA 100 55
APT56_RS08890 1984044 .. 1984060 + -15.1  -4.35524   TGCCGAAACCACAAA              GCGCCCG AAC CGGGCGC              TTTTCCATTTCAGGC 100 44
APT56_RS08900 1985869 .. 1985900 +    -2  -3.08679   CCGGCCACTGATTAC      CG-CCGCCGGCCGTC CGC GCCGGCCTCCAGACG      TATTCCATACCCACC  42 30
APT56_RS08905 1987519 .. 1987551 +  -8.3  -2.54523   ATGAAGTGATGGGCA     AG-GCGCCGCGTCC TGCATC GGCCGCGGCGCTCC      TGGCTTGGAATGTCG  53 32
APT56_RS08910 NONE
APT56_RS08915 NONE
APT56_RS08920 NONE
APT56_RS08925 NONE
APT56_RS08930 NONE
APT56_RS08935 1994482 .. 1994517 + -18.2  -2.93382   TGAAACCTGCAGGGC    TGCCCATCGCGGCCGC GCGG GCGGCCACGCTGGGCG     TCTGTGCATCTGAAA  89 297
APT56_RS08955 NONE
APT56_RS08960 NONE
APT56_RS08965 NONE
APT56_RS08970 NONE
APT56_RS08975 2004195 .. 2004208 +  -3.7  -3.28712   AGCGCGACGGTGCTG               GCGTC ATGA GCCGC                TTCTCGCCCCGCGAC  47 17
APT56_RS08980 NONE
APT56_RS08985 NONE
APT56_RS08990 NONE
APT56_RS08995 2007444 .. 2007489 + -12.5  -3.14053   GCCCAGGATGCGCGC CATCGGCACCTGCCACACGCCC GAC GGGCGCGTGGT-GGTGGTGACG TATTCGGTGATTTCG  68 460
APT56_RS09005 2009328 .. 2009339 +  -7.2  -3.28712   ATCCGCGCGCGGGCC                GCCG GGTT CGGC                 TTGTGACCCGGCCAC  54 40
APT56_RS09010 NONE
APT56_RS09015 NONE
APT56_RS09020 2013389 .. 2013428 + -14.8  -2.54192   CGCCTGAGTGCGTCC  AGGGGCCGGATCGCGCGC GCTT GCGGGCGCTCCGGCCGCG   ATTCATAATCCTGTC  74 34
APT56_RS09025 2014313 .. 2014337 + -12.2  -4.86621   CAGGCAACAAAAAAA         CCCCAAGACGC CTCG GCG-CTTGGGG          TTTTTCGTTGCGCGT 100 69
APT56_RS09045 2022306 .. 2022354 +   -14  -3.77014   CGGGCGGTGGCCTTT TCACCGGTGTAATACGGGGCGGT TTGA GCCGTCCCGTATTACACCCA-GA TTTCAGTCGTTTTCT  86 60
APT56_RS09050 NONE
APT56_RS09055 2025652 .. 2025676 +  -5.7  -3.71848   CTTGCGCTTCTGGTC          GATGACCCA GTGCGCA TGGGTCAGC          TTGTTGATGGCGCCG  61 199
        dnaE NONE
APT56_RS09070 NONE
APT56_RS09075 NONE
APT56_RS09080 NONE
APT56_RS09085 NONE
APT56_RS09090 NONE
APT56_RS09095 2035766 .. 2035784 + -11.7  -4.26903   GCCCAAAAACAACAA             CGGGACC GCCAG GGTCCCG             TTTTCATGCAATGCG  88 55
APT56_RS09115 NONE
APT56_RS09120 2041594 .. 2041620 +  -2.8  -3.76373   CCCTGGCGCGCCGGC         ATGACCGGCGTG TGA CAGGCCGATCGA         TTTACGTATTACAGC  54 22
APT56_RS09125 2042023 .. 2042043 +  -6.1  -3.01791   CGGCTACCGGTCAGA            GTTGGGC CATCGCC GCCCGAC            TCTTGCCGGCCGACT  48 78
APT56_RS09135 2044819 .. 2044840 +   -13  -2.80816   TGCTGGCAAAAAAAA           GGACGGCC GCGTCG GGCCGTCC            TGTCGTCGATCAACG  69 47
APT56_RS09150 2050146 .. 2050181 +  -4.6  -3.38272   CTGGGATCGGTTGTG    GGCTTGGGTAGAGGGA CTCC TCCCTGTGTCCATGAC     TTCTGACTACTGATC  51 90
APT56_RS09155 NONE
APT56_RS09160 2050418 .. 2050468 +  -7.6  -4.18197   TGGTGGGATGTAGAG GCTAACTCATAGCGTCGTGCGGAT AAT GTCTGCCCGGTCTTATGAGTTAGG TTTTACCTGACAGCT  71 52
APT56_RS09165 2053736 .. 2053752 +  -2.3  -2.87881   CCAAGATTGGAGCGG              TTGTC CCTCAAA GACAA              TCTCTCAACCAGTTA  40 175
         rrf 2053893 .. 2053926 + -20.5  -4.72986   CAGGCTTTTATTGCT     CAAAACCCCATAGGC TCGC GCCTGTGGGGTTTTG      TTTTTGGTGCGCCTC 100 36
APT56_RS09185 2059223 .. 2059249 + -17.3  -5.16237   TGATCACGTCAAAAA        GCCCCCGGGACC GCAA GG-CCCGGGGGC         TTTTTTCATGGGATT 100 49
APT56_RS09225 2066312 .. 2066333 +   -13  -3.54019   TAGGACAAATGCGGC           CCCCGCGT CTTGTA ACGCGGGG            TATTGTCTTGTTTGT  78 58
APT56_RS09230 NONE
APT56_RS09235 2068481 .. 2068501 + -18.3  -5.45802   TGAAGGAATGAAAAA            TGCCCGGCG GAT CGCCGGGCA            TTTTTGTTTTAGGGG 100 30
APT56_RS09265 NONE
APT56_RS09270 2076548 .. 2076570 + -16.3  -5.75945   GACGCCACCGGCAAG           GCGGGACGC GGCGA GCGTCCCGC           TTTTTTTTGGCCCGT 100 55
APT56_RS09275 NONE
APT56_RS09280 NONE
APT56_RS09285 NONE
APT56_RS09290 NONE
APT56_RS09295 NONE
APT56_RS09300 2082181 .. 2082233 +    -6  -2.62184   GCAGCGCTCGCCGAC GAAGCGG-TGCCTGCGGCCGCGCAGG CCG CC-GCGGGGCCGCTGGCAGCGGCGAA TGGTGTGCCCGGCGC  45 136
APT56_RS09305 2082708 .. 2082718 +  -2.4  -3.30441   GGGGACCTCGCATCG                 CCGC GTA GGGG                 TTGTCACCGATACTC  45 76
APT56_RS09310 2084183 .. 2084203 +  -6.8  -4.19704   AAGCACGCGGTGCAA           CGCTCGCCG CGTT CGG-GGGCG            TTTTCCATGCCCTTG  69 435
APT56_RS09325 NONE
APT56_RS09330 2091807 .. 2091827 +  -6.9  -3.53012   TTCCATGGACTGGAC            TTCGTCCAT GTC GTGGATGAA            TTTGCGCAGCACCCA  55 306
APT56_RS09345 NONE
APT56_RS09350 2096310 .. 2096330 +  -4.7  -3.70478   CCAGCTGCTGGGCGC           CGCGCGTC CCTAAT GACGC-CG            TTTCAATGAATTTGT  58 13
APT56_RS09355 2098711 .. 2098734 + -19.6  -4.86731   GGCGATGTCCCTCAA          CGGCGGACCC CGCA GGGTCCGCCG           TTTTGTTTCCGGAAC 100 54
APT56_RS09360 NONE
APT56_RS09365 2101056 .. 2101081 +  -7.6  -3.33737   GGCGCAGTCCCTCGC        CCTG--GGCGCG CACG CGCGCCAGCAGG         TTGTCGCGCTTGATC  55 373
APT56_RS09380 2103847 .. 2103859 +  -3.3  -3.49618   CACCGGTGGCGCGCC                TCCCG AAT CAGGA                TTGGTTGTATGAGAG  49 1
APT56_RS09385 2104459 .. 2104511 +  -2.4  -2.92653   TGTCGAAAACCGGGA TGGCTTTGACGCATCCGGATGCGC CTGGC GCGCATGCGGAAGGGATCTGGCCG TCTGTCAACTTATGA  41 56
APT56_RS09390 NONE
        ectC NONE
APT56_RS09400 2107343 .. 2107364 + -17.3  -5.58074   CTTGCATGCGCCGCA           GCCCAGGCC GTTC GGCCTGGGC            TTTTTTTCGTCGTTC 100 169
APT56_RS09405 2108302 .. 2108318 + -10.8  -3.03124   TCTAGCGCGTCGCGT              CCCGGC GCGAG GCCGGG              TCTTGCGCGATCAGG  62 36
APT56_RS09415 NONE
APT56_RS09420 2110434 .. 2110466 + -17.7  -5.52384   GCCGCCCATAGCGAA      GGGGAGGGATCCGGC ACG GGCGGGTTCCTCCCC      TTTTTTTGATGAGGG 100 54
APT56_RS09425 NONE
APT56_RS09430 2113250 .. 2113269 + -13.6  -5.40072   GGCAGCCGTCCGCAA            GCCCGGTT TCCG AACCGGGC             TTTTTTTCGGGCCAC 100 73
APT56_RS09435 NONE
APT56_RS09440 NONE
APT56_RS09445 2116788 .. 2116809 + -13.7  -5.28942   GCGTTCCATGACAAA           GGCCAGCCT TTAC GGGCTGGCC            TTTTTGTTTGGCGTG 100 45
        rpsP 2118175 .. 2118185 +  -2.4  -3.14564   TACTCGGCCAAGGTT                 TCCG CCG CGGC                 TTAATGCCCGCGTCG  42 11
APT56_RS09460 NONE
APT56_RS09465 2119799 .. 2119818 + -12.2  -3.72695   TCTTTCGGTGGCGCG            CCAGGATG CGGG CATCCTGG             TTTCATGCGGACGCT  80 132
APT56_RS09470 2120731 .. 2120755 +  -7.8   -3.6682   CACTGGGGATCATCC          GCCTTCCGGG CACGC TCCGGAACGC          TTTGCCTAGATGAGG  63 81
APT56_RS09475 2121520 .. 2121536 +  -7.2  -3.72576   TGAAGAGGTGGGGGC              TGGGCG GCTGA CGCCCG              TTTGATGGCGGGCGC  62 15
APT56_RS09480 NONE
        glnQ NONE
APT56_RS09490 2124386 .. 2124405 +   -15  -3.53012   TACCCGCGAAAAAAA            GCCCCGGA CGGG TCCGGGGC             TTTGCGCGCGCGGCG  86 81
APT56_RS09500 2128163 .. 2128173 +    -4  -4.44448   ATCCACAGCCGTTGA                 TTTC CCG GAAA                 TTTCTTTAGCGTCAT  69 26
APT56_RS09505 NONE
APT56_RS09510 NONE
        ispG 2131137 .. 2131148 +  -7.2  -2.90075   GTTGCGCGTCGCTAC                GGCG CGCT CGCC                 TCTCATTAAAAGAAA  49 5
APT56_RS09520 NONE
APT56_RS09525 NONE
APT56_RS09530 NONE
APT56_RS09535 NONE
APT56_RS09540 2136837 .. 2136851 +  -2.8  -3.57144   ACGGGCCGGGAAAAC               CCTGTA GAG TACATG               TTTCGGCGTGCCCCA  51 107
APT56_RS09545 2137178 .. 2137207 + -15.8  -4.36595   CGCAGTACCTTTTAT       TGCCCGCCGAACG GTCTA CGT-CGGCGGGCA       TTTTCGCTTTGGCTC 100 50
APT56_RS09550 NONE
APT56_RS09555 NONE
APT56_RS09560 2140562 .. 2140585 + -14.6  -4.72272   AGGCGGTATCCCCAA          GCCCCTTGGT CTGC GCCAAGGGGC           TTTTTCCTGGCGGCC 100 52
        hisZ 2142013 .. 2142023 +  -6.8  -2.55896   GATTTCCGGATTTCC                 CGAG AAA CTCG                 ATATTGATTCGTAAC  47 76
APT56_RS09570 2143355 .. 2143384 + -23.6  -4.55826   GGTTATCATTCGCAA       GGCCGCCGCCGG CTCATA CCGGCGGCGGCC        TTTTCGTATTTTCAC 100 46
APT56_RS09575 2144373 .. 2144399 +  -5.9  -3.98236   CGCCGTCCGGAACCA        CGTGGCGTTGCT GGTA AGCAA-GCCAGG         TTTGTCATCAACTTT  64 439
APT56_RS09580 2144661 .. 2144690 +  -6.5  -3.14344   GCCTGTATTGATTTC       TGATTCCCGAATC TATT GATTCCAGAATCA        TTCATCCAGGAACTA  51 30
APT56_RS09585 2146891 .. 2146924 +  -7.3  -3.51934   GAATCGGCCTTGAAT     CTGTGTCGGCGGG ATGCAGGG CGCGCCGGCGCGG      TATTTGTAGGCGCGC  60 177
APT56_RS09590 NONE
APT56_RS09595 2149968 .. 2149993 + -16.9  -5.07652   TACCAAAGAAAGACG         CGGGTCTCGGA GCAA TCCGAGGCCCG          TTTTCTTTTCCGCAA 100 36
APT56_RS09600 2150693 .. 2150738 + -12.4  -2.85437   CCTTTTTGCCATTTT GGGCCGCGAGGCCGCGCTCTG AACGC CCGCGCGCGGCGTC-CGGCCG TCGTTCATCTTCATC  66 167
APT56_RS09605 2152372 .. 2152412 + -15.5  -4.64598   CGCCGCCTCACAAGA  GACAAGGCTGGTTTCCGAT GGC GTCGGCAACCGGCCTTGTG  TTTTTGCAATCATTG 100 93
APT56_RS09615 2154894 .. 2154906 +  -6.2  -3.09516   GGCCCCGCCAGCCAG                CGCC GCATG GGCG                TTGAATAATAGCGGG  48 65
APT56_RS09625 NONE
APT56_RS09630 NONE
APT56_RS09635 2158784 .. 2158801 +  -6.9  -3.60792   GCTGGGGCCGTGCCC             TGGCCGG GAGG CTGGCCG              TTTGCGGATTGGCGA  59 89
APT56_RS09640 2159455 .. 2159481 +  -2.9  -4.08216   AGCGGTTTGTGGATC        CGGCGGTGGGTC CCAT GACGCGC-GTCG         TTTTCCCGGGCCTGC  60 8
APT56_RS09645 NONE
APT56_RS09650 NONE
APT56_RS09655 2163321 .. 2163359 +  -8.7  -2.62184   GGGGCCGGTGGCGAG   GCGACGCTGCCATGACC TGGCT GGCCATGCTGGCGGCGC   TGGTCTGCGCCACGC  53 11
APT56_RS09660 NONE
APT56_RS09665 2165094 .. 2165135 + -16.5  -3.04144   CTGCTGCGGGGGGGA GGGTGAGC-GCCCGCCCGGC CCT GCCGCGCGGGCGGCTCAGGC TATTGCGGGTCAAGG  85 20
APT56_RS09680 2168410 .. 2168439 + -26.5  -4.18018   GCCTGAATGCAACAA       CGCCCGGGTGGCC GCAA GGCCACCCGGGCG        TTTTCGATGCACGAC 100 60
APT56_RS09695 NONE
APT56_RS09700 2172188 .. 2172214 +  -3.1  -4.07568   TCTTGATGTTCGTTT        TGCGCGTTTTTT GGCG ACAAAACG-GCA         TTTTGAGCGGGGAAG  60 35
APT56_RS09705 2173398 .. 2173417 +  -6.4  -3.05816   TTTGCTTCGGCGTGG            CCGGTCTCG ATG CG-GATCGG            TTCGCTGGCCGGTGA  48 311
APT56_RS09720 2178472 .. 2178488 +  -2.9  -2.67477   CGGAAATTCAGGCTT              TGGCGTC GGC GGTGTCA              TAATCTGGGTTGCTT  40 6
APT56_RS09725 2179584 .. 2179600 +  -3.5  -3.14136   CGGCCAGTGCGGCGA              GCCGGGC TGA GGCCGGA              TTCCATCGTTCCTGA  43 16
APT56_RS09730 2180579 .. 2180599 + -18.3  -3.53012   CTGCCGATTTGACGA            CTGCCGGCC TCA GGCCGGCAG            TTTCACGCCCGGGCC  93 131
APT56_RS09780 NONE
APT56_RS09785 2201981 .. 2201991 +  -2.4  -2.78405   CCGACTCATCCCATC                 GACC ACA GGAC                 CGTTTTTTCCATGAC  38 42
APT56_RS09790 2203122 .. 2203142 + -19.7  -4.72986   CGGTCCCGAGTCCTG            GGGCCGCCC GCG GGGCGGCCC            TTTTTCATGCCGATG 100 69
APT56_RS09795 2204488 .. 2204511 + -15.4  -2.90496   ACAAGGTCGTAACCG          CAAAGGCACC TTCG GGTGCCTTTG           TCATTTGCGCGGGGC  80 74
APT56_RS09800 NONE
APT56_RS09805 2207413 .. 2207429 +  -3.5  -2.94099   AGCCGGACGCCTGCC              GGCGCCC AAT GGAGGCC              TGTCTCATGCAACGC  42 39
APT56_RS09810 2208545 .. 2208565 +  -3.8  -3.44229   AGTCCGCGCCCCGCC            GGCGCGCC GGCAA GGCTCCCC            TTATACTGGTCACAT  51 40
APT56_RS09815 2209289 .. 2209321 +  -3.2  -3.66288   AAAGTAGTGCGGTGC      CGGCGGGAGCGGTT GAAAA AACCAAACCAGCCG      TTGTGTTGAGGAATG  51 47
APT56_RS09820 2209597 .. 2209622 + -14.1  -5.04601   AGCACCACCCCGAAA         GCCGCGACAGTC TTT GACT-TCGCGGC         TTTTTGCTTTGTGCG 100 77
APT56_RS09825 2210577 .. 2210590 +  -5.9  -3.14132   TCGACGCCTGCGCGG               CGGGG CCTG CCCTG                TTCCTGGCCGCGCGG  49 90
APT56_RS09830 2210912 .. 2210924 +  -4.7  -3.53012   CCGTCGGAAGTGACT                CGGGC CGC GCACG                TTTCAGGGCAGGGGC  53 28
APT56_RS09845 2212418 .. 2212444 +  -4.3  -5.21709   GCGTTCGGGGGTCTG        GCGGCCGGCCTG TAAT TGGGCCAG-CGC         TTTTTTCATGTGCAG  86 100
APT56_RS09855 2213099 .. 2213116 +  -8.3  -3.74872   CTGCGCGCGCCGTAA             CGCGCCG AAAC CGGCGCC              TTTCATCGGCTGGGT  67 56
APT56_RS09860 2214523 .. 2214547 +  -5.5  -3.16564   GCGGCCATCGCCCAG          GCAGGGCAGCG AGT CGATGCCGCGC          TTGATCAGGTGCGAG  47 374
APT56_RS09885 2220238 .. 2220257 +  -3.4  -2.70932   AGGTGCTGAAGGCCA            CCGCCAGC AGCA GCTGGAAG             TAGTTCAGCGGCGCC  40 143
APT56_RS09945 2235496 .. 2235514 + -12.4  -3.31322   GGCTAGACGCAAGCG             CCTCGTGC CGC GCGCGAGG             TTCTCGCGGGTTGCG  73 515
APT56_RS09955 2237113 .. 2237168 +  -5.5  -4.78764   ACAGGGCAAGCGCCA GGTCGTCGGACAACTGC-AGC-TTGCGC ATG GCGCGACGCTTGTGGGTG-CTGACGGTC TTTTTGCTGCGTTTC  79 110
APT56_RS09965 2239270 .. 2239286 + -13.7  -4.17701   AGACAACCAAATGAA              CGCGGCT ACC AGCCGCG              TTTGTCGTTTCTGAA  93 282
APT56_RS09970 NONE
APT56_RS09975 2241913 .. 2241948 + -11.1  -3.62224   GGCCGCTCCTGCCCC    GCGA-CCCGCCGTCCA GCCCA TGTTCGGCGGGTTCGC    TTATTGGGCGGCTCT  74 74
APT56_RS09980 NONE
APT56_RS09985 2243430 .. 2243445 +  -3.2  -3.55946   TGCGGGTAGACTGAC              GGGCAG GAAC TTGTCC               TATTATTTCGGCTAA  51 27
APT56_RS09990 NONE
APT56_RS09995 2245668 .. 2245685 + -14.1  -5.75342   CCAACGAACGGAAAG             CCCGGCG CATG CGCCGGG              TTTTTTTTGCGCCGG 100 66
APT56_RS10010 2248484 .. 2248514 +  -3.1  -5.47218   TTTCTCCTGTGCTTT      GATGGGCGGTCACC GCAT GCGGCCCGCCC-TC       TTTTTTTGCCTGCGG  93 78
APT56_RS10015 2248856 .. 2248873 + -14.1  -4.67038   GGGACACTTTTGCCA             CGGCCGC TTCC GCGGCCG              TTTTCGTTTTCGGCA 100 48
APT56_RS10020 2250483 .. 2250497 +  -9.2  -3.18912   ATCCTCCCCGGCGCC               GGCGGG GCG TCCGCC               TTGGTGCGTGGATCC  62 47
APT56_RS10025 2251109 .. 2251123 +  -4.3  -2.64735   TGATGCCTTTCGCTT               GATCT AAGGG AGATC               TACTATGCCTCGCGT  41 24
        rplT 2251516 .. 2251546 + -16.2  -4.09864   CTCATCGCGCATCGC       TGCAAACGGGGCTG TAA TGGCCCCGTTTGCG       TTTTGAAGGCTGGAT  95 54
APT56_RS10035 NONE
APT56_RS10040 NONE
APT56_RS10045 2255351 .. 2255374 +  -2.4  -2.98545   CCGCAGCGCCCGACG          CCGA-GGAGTG ATA CGCTTTGTCGG          TAATTGTTATCGGCA  41 15
APT56_RS10050 2256086 .. 2256111 +  -4.8   -4.7173   TGAGTATTCGGCACT         TTTTTTGCAC CAATGC GTGCAAACAA          TTTTTAGGTCTGCTA  80 261
APT56_RS10055 2256229 .. 2256258 + -19.5    -4.208   ACCAGCAATACCCTA       GGGGGTTAGTGAT AGTA ATCACTAACCCCC        TTTCTCATTTTGGGG 100 37
APT56_RS10115 NONE
APT56_RS10120 2266826 .. 2266845 +  -7.1  -4.56597   CCGGGTGACGCAGAT            TTGGCGC CTCAAA GCGCCGA             TTTTTCGAACGAGCG  79 103
APT56_RS10125 NONE
APT56_RS10130 2268311 .. 2268321 +  -2.4  -3.72374   CGATCGAATCGATAC                 GGGC TAT GACC                 TGTTTGTTGCTCCAG  53 221
APT56_RS10135 2273315 .. 2273328 +  -8.1  -2.86432   CGCGCAAATGTTCTC               GCGGA CCAT TCCGC                TGTCGTCGTATTGAG  52 116
APT56_RS10140 NONE
APT56_RS10145 NONE
APT56_RS10150 NONE
APT56_RS10155 NONE
APT56_RS10160 NONE
APT56_RS10165 2279168 .. 2279184 + -10.8  -4.45068   CGCAATCACCCCCAA              GGCCCC GCATA GGGGCC              TTTCTTATTGGGAAT  88 57
APT56_RS10170 NONE
APT56_RS10175 NONE
APT56_RS10180 NONE
APT56_RS10185 NONE
APT56_RS10190 NONE
APT56_RS10195 2282403 .. 2282419 + -13.7  -5.14563   CCCCTTTGCCACCCG              GCCGCCT TGC AGGCGGC              TTTTTTACTGGAGCC 100 56
APT56_RS10200 NONE
APT56_RS10205 NONE
APT56_RS10210 2284759 .. 2284775 +  -2.2  -2.80816   GAGCTGATCATCTGG             CG-GCCG ATCC TGGCCCG              TCTCGTCAGTCCCGA  40 34
APT56_RS10215 NONE
APT56_RS10220 NONE
APT56_RS10225 NONE
APT56_RS10230 NONE
APT56_RS10235 NONE
APT56_RS10240 NONE
APT56_RS10245 NONE
APT56_RS10250 NONE
APT56_RS10255 NONE
APT56_RS10260 2294261 .. 2294276 + -10.4  -5.54894   TCCGTATCGCTCATA              GACCGC CTTG GCGGTC               TTTTTTTCGTCCATT 100 54
APT56_RS10265 NONE
APT56_RS10270 NONE
APT56_RS10275 2295519 .. 2295533 +  -5.6  -3.09834   CTGGGTGCGCGGCCC               CGGCCA GGG TGGGCG               TTGAGTACTGCGATC  49 7
APT56_RS10285 2300078 .. 2300105 + -14.1  -3.15999   GGACCCAATAGGAAA        CGCCCCGCTGG CGGCAA CCAGCGAGGCG         TTAGGTCTGTGACAA  76 180
APT56_RS10295 2302074 .. 2302087 +  -2.3  -3.92075   TCTACGACAAGGTGA               AAGGC TGAC GCCTA                TTTCTCCATGGGCGT  55 18
APT56_RS10315 2305802 .. 2305838 +  -2.8  -3.04501   ATTCGCCTCGCGAGC   TAGGATG-CCGCGGCGC GTTC GCGCCTCAGTCATCCGC    TATTGGAGCCTTCAT  43 46
APT56_RS10320 2306167 .. 2306198 + -13.7  -3.21772   GACTGAGCATTGCGC      GGCGCGTGG-CGGG CTTGA TCCGACCGCGCGCC      TGTTATGCCCGGATT  78 35
APT56_RS10325 2307381 .. 2307402 + -11.6  -5.27335   GTGTTCCCTCCAGAA           GGCCACGA TACCCC TCGTGGCC            TTTTTGTTTGCGCGG 100 196
APT56_RS10330 2307960 .. 2307971 +  -3.6  -4.72272   CGCCTTCGATTCCTT                TCCG ATGA CGGG                 TTTTTCATGACGACA  75 61
APT56_RS10335 2308935 .. 2308963 +  -9.6  -3.15663   AGATGGTGCAGTTGT       CGCACGGCGAGCGG ATT TC-CTCGCCG-GCG       TTGATGGCGATGAGT  60 479
APT56_RS10355 2311850 .. 2311870 + -19.7  -3.01791   GACGCCCTGTGTCGT            CGCGCCGGC ATG GCCGGCGCG            TGTTCGCGCGCGCGT  93 46
APT56_RS10360 2312417 .. 2312467 +  -3.2  -3.61294   GAAAGGCCGCGCTGT CTTGAGCTGTCCGTGA-CCGCCGG GCAGG TCGGCGGGTCATGCGC-GCGCTAG GTTTTGTTTCGTTTA  51 134
APT56_RS10365 2313199 .. 2313220 + -18.7  -4.27316   ATGCGCACAGACAAA           CGCCGCGGC GCAA GCCGCGGCG            TTTTGCGTTGGAGGC 100 73
APT56_RS10380 2315153 .. 2315170 +  -4.7  -2.69964   CGGCCGTCATAGGGG             CGGCGTG CTAT CGCGGCG              TGCTATCGTTGAGGC  44 29
APT56_RS10385 2315698 .. 2315712 + -11.4  -3.64822   GCACCCGCTACGTCA               CGCGTG GTT CACGCG               TTTAGGTAACCGACT  74 294
APT56_RS10390 2316036 .. 2316046 +  -5.4  -2.65476   TTCCAGAGATGGCGG                 CGAA AAT TTCG                 GTTATCGTCGCTGCT  43 109
APT56_RS10395 2317186 .. 2317200 +  -8.5   -4.0825   TGGCGACCTGCCTGG               CGGCG CTCCC CGCCG               TTGTTTAATTGCGCC  72 3
APT56_RS10400 2317573 .. 2317593 + -15.4  -5.18371   AGCGCCTGTCATGAT            CGGGCCCC TTTTT GGGGCCCG            TTTTGTTTTGTAACG 100 72
APT56_RS10410 NONE
APT56_RS10415 2320598 .. 2320629 + -23.2  -3.56568   ATCGTTGCGATCCCA      CGGCCCCGATTGAT GTGA ATCAATCGGGGCCG       TTTCACGCGTGCTTA 100 51
APT56_RS10420 2321038 .. 2321073 +  -7.4  -3.79678   CGGACTAGCGGCGCT    TGAGCGCTGCGGTCGCC GGA GGCG-CCGCCGCCCATA    TTGTTATCCCCACTT  65 33
APT56_RS10425 NONE
APT56_RS10430 NONE
APT56_RS10435 NONE
APT56_RS10440 2325531 .. 2325547 +  -5.7  -6.10489   GAAGCGTTGGCGCGC              GGCGTGG CGG CCGGGCC              TTTTTTTTTCCACTT 100 39
APT56_RS10445 2326528 .. 2326583 +    -3  -3.40522   ACGCTTCCTTGTGCA GGGTCTGGCCGCGGCGGTCGCCGCGGC GGC GCT-TGCCGATCATCACGTCCAGGCCG TTGTCGTCCAGCAGT  47 437
APT56_RS10455 2328572 .. 2328586 +    -7   -3.7574   GCGGGGCTTGTCAAT               CGGCCG GCG CGGCGG               TGTTTTCCTGCTGCC  62 506
APT56_RS10470 2331563 .. 2331576 +  -2.3  -3.05384   TCCCGTATCGACCGG               CCCTA CGCC TCGGG                TTGCCTGGGCGGGAA  42 96
APT56_RS10485 2333871 .. 2333893 +   -22  -3.75153   GCCGCGCAATGCAAA           CGGGGCGCCC GCT GGGCGCCCCG           TTTGCATTGCGCGGC 100 54
APT56_RS10500 2339050 .. 2339084 +    -7  -3.41051   GGCGCGCGGGCCCGG    CGCCGCGTGACGGCC CGTGAT GGCCGCC-TGCGGGG     TTCTGGTCGCGATGC  55 42
APT56_RS10525 2347354 .. 2347367 +  -3.7  -3.61398   GCGCCTTGACCATCT               GGTCG CTCT CGTCC                TTGTTGACGCGCGGG  51 174
APT56_RS10535 2349794 .. 2349822 + -12.4  -4.11216   CCGTCGCGGCGCCTT        TCAGTCGCCGCC TGGGC GGCGGCGGATGA        TTTTGAAAGTGGCGG  85 85
APT56_RS10545 2351815 .. 2351835 +  -8.2  -3.36557   CCCGGCCTGTTCGAA            CGCGGCGA TGGAT TCGCGGCG            TTGCTTGACCTGCTT  59 367
APT56_RS10645 2368302 .. 2368312 +  -3.2  -3.60948   GGGCAAGGGTGGTTT                 TGTG CGT CGCA                 TTTAAACATGTATTA  51 41
APT56_RS10650 2369594 .. 2369610 +  -7.2  -2.78463   TCGGCAGCGGCGGCG              CGCCGG CCTGA CCGGTG              TATCCTGGCGCCCAT  48 15
APT56_RS10655 2370118 .. 2370141 +  -2.3  -3.37796   GTCCAAGTCGGTCGT          CCGGGCC GGGACCATGA GGCCGGG           TTATGGGTGCTGGGG  45 82
APT56_RS10660 2371512 .. 2371534 +  -8.3  -3.34715   GGGGGCTGCAACTCG           CGGGCCGGC ACTTC GCGGGCCTG           TATTTCCCGGGCCTC  60 59
APT56_RS10665 2372724 .. 2372736 +  -6.9  -3.24232   CGGGACGAGGCCGGC                GCCGC ATA GTGGC                TCTCTTTGAACGGAG  54 73
APT56_RS10670 2373730 .. 2373757 +  -5.4  -3.39216   AGCCTGTCGCCAGTG        GC-CGGGCTTGCC GAG GCCGCGCCCGAGC        GTTTTTCACTGGCGG  51 39
APT56_RS10675 2374664 .. 2374685 +  -5.1  -3.46824   GATTTAATCGCTTCA           TGTGGCGTC CGTT GATGCCGTA            TTGATTGATTCATGG  53 100
APT56_RS10680 2376120 .. 2376153 + -13.1  -3.05844   CTGCCGGCGGCCTGC     GCGCCGCGTTGCGCCG CGG CGCCG-AGTGCGGCGC     TGTTGCCGTCGCGGC  72 496
APT56_RS10690 2377423 .. 2377465 +    -4  -3.12351   AGGTGTTGGCCAGCC CCAG-CGCGGT-GCCGGCGC GGGCG GCGCCGGCCAGCGTGACCAG TTCGGTGTAGGCCAC  45 218
APT56_RS10700 2379572 .. 2379609 +  -9.1  -2.52464   CGTGCGCGACAGCGT  CGCGGCGCTG-CCGGCC ATGCCG GGCCTGCCGGCGC-GCG   TCCCTTCCGAGGAGG  55 13
APT56_RS10705 2380521 .. 2380535 +    -7  -3.33483   GCTGCGCCGCGACCT               GGCGGC CCT GCCGGC               TTGATCCTTTCACTG  55 7
APT56_RS10710 NONE
APT56_RS10715 2382726 .. 2382738 +  -4.7  -4.42788   CTGAGGATGTTCTTG                GCCAC GCC GAGGC                TTTTCTGGAATTCAC  72 407
APT56_RS10725 2384753 .. 2384785 +    -9  -2.52464   CGCCGGACAGCTGGT     GCGGCCAGCGGCGGC CGTA GTCGCC-CAGGCCGG      TCAGTTGCAGCGCGG  51 397
APT56_RS10760 2392558 .. 2392600 +  -6.1  -3.87815   CCAGCAGATCGCGGT CGGCCGGCGCG-GGAC-GCAC GTA GTCCAGGCCGCGCGCCTGCAG TTTGTCGGGGTAGAC  63 304
        aceE 2396472 .. 2396489 +    -4  -3.03124   CGAGGCGGGCGGCGA             CCGGCG GGGACG CGGCGG              TGTTGCCGCGTCGCG  44 82
APT56_RS10785 2398884 .. 2398905 + -18.7  -3.34192   GGCGTTCGATCATGG           CGCGCGCCG CCGC CGGCGCGCG            TTCCTTGGCGCCATT  93 107
APT56_RS10795 2400777 .. 2400803 +   -13  -3.05844   TGCCCAGTTGCCGGA         CCAGCGCCGG GAAGCGG TCGGCGCTGG         TGTTGCCGTAGCCGA  66 171
APT56_RS10805 NONE
APT56_RS10810 2404129 .. 2404147 +  -5.8  -3.28712   CCGCGCCGTTCAGGC             GCGCCGGC CGC GCCGCAGC             TTCTCGCGCAGCAGG  51 145
APT56_RS10840 2410234 .. 2410247 +  -2.3  -3.08679   TGCCGCGCAGGATGG               CGTCC CACA GCACG                TGTTCCATCGGGCCA  41 171
APT56_RS10850 NONE
APT56_RS10855 2414698 .. 2414721 + -13.8  -5.40072   GCGCCCGACCCCAAA          CCCGCGCAGG GTGA CGTGCGCGGG           TTTTTTTGCGGCACA 100 168
APT56_RS10860 2415512 .. 2415565 +  -2.2  -3.17075   CTCCCGCCTTTCACA CACCCAG-AC-GCCCATCGAGGCCGC CCGC GCGGCCACGATGGGCAGCCCTGAACA TTCCCTTCCCCGACC  42 163
APT56_RS10865 NONE
APT56_RS10870 NONE
APT56_RS10875 2418741 .. 2418790 + -10.5  -3.05384   CCAGCGCGCGCCGGC CGGTGGTGCG-GCCGGTCCGCGCC GCT GCCGTCGGCCTGCGCGTGCCGCCG TTGCCTGGCGCGGGG  63 73
APT56_RS10880 NONE
APT56_RS10885 2421393 .. 2421410 +  -4.7  -3.57144   GGCGATTCCGTTCTA             GGGCCCG CGTC CGGCTCC              TTTCAGGATAGACAG  55 25
APT56_RS10890 2421923 .. 2421975 +  -5.4  -2.84192   CTTGAACAACGCTAC GCCAACGTGGCCTGACGCGGCGGCTC CAT GACACGCCCCGTCCG-CCGCCT-GGC TCTCCTGATCCTGTG  45 11
APT56_RS10895 2422840 .. 2422876 +   -18  -2.82623   GCGCACGTGGCGCGG   CAGCACCGCGCC-GCGG CGGC CCGCCGGCGTGGCGCTG    TAGTTGTGGGGCAGG  80 490
APT56_RS10925 2429141 .. 2429153 + -10.5  -3.13403   GCAGCAGTACAGGAA                CGCGC CGG GCGCG                TCTTCGTCGGCGCCG  60 147
APT56_RS10940 2430969 .. 2431006 + -12.7  -2.52516   GCGCTTCACGGAAAG   CGGTTCGGCCAAGCGACG GGT CG-CGATGGGTCGAACCG   GTTGATCGTCGAGGA  67 198
APT56_RS10985 2440311 .. 2440345 +  -5.7  -3.72141   GGGCGTATCCGCGAT    GCG-GCG-CTGTACGTC GTG GGCGAACAGGTGCGCGC    TTTCGATGTCGGTGT  61 231
APT56_RS11000 2444196 .. 2444210 +    -7  -3.62096   AAACGCGCTGGTGCC               GGCCAG GGC CAGGCC               TTTCACGTCGTCGGG  60 460
APT56_RS11050 NONE
APT56_RS11055 2455127 .. 2455150 +   -11  -4.56597   AGAGCTGGGATAGCC          G-GGGAGGGCG TGT TGCCCTCCCTC          TTTTTCGCGGAGCAG  91 40
APT56_RS11060 NONE
APT56_RS11065 NONE
APT56_RS11070 NONE
APT56_RS11075 2461004 .. 2461036 + -14.8  -2.64747   CGGGCTGGCAAGGCC     CGCCGGGGCGCGTGG CGCG CCGC-CGCCCCGGGG      CTTGTCCTGGCGTCA  74 44
APT56_RS11090 2464025 .. 2464058 +  -7.3  -3.05384   CAGGTCATGCCCCGT     CGTGGCGTTCGATGCG TCA TGCG-CGTGCGCCGCG     TTCGGTCCGCGCGGG  55 71
APT56_RS11105 2467832 .. 2467850 + -13.8  -2.89569   CGAGGGGCGCCGAGG             CCGGCGCG CCC CGCGCTGG             TGCTTCATTTGCGCC  73 51
APT56_RS11110 2470557 .. 2470570 +  -3.7  -3.78934   AGGCCATTTCGGGGA               AGCCC ATGC GGGCG                TTGTTCTGCGCCAGC  55 466
APT56_RS11120 2473580 .. 2473608 +   -11  -5.00616   CCAGGATCCTGGCAG       GAAGAACGGGCGC TTTG GCGCCCGT-CTGC        TTTTTTCGGAGCGCG 100 48
APT56_RS11125 2474506 .. 2474530 + -13.5  -3.04144   CTCTTGTAGGGCACG          GCGTTGGCGGC GGC GCCGGCGACGC          TGTTGAAGGTGGCCC  69 471
APT56_RS11150 2479615 .. 2479664 +  -6.4   -4.4267   CTGGCCAACTGTTCG CGCGTC-TCGGGCGTCAGCCGCGA GGCA TCGCG-CAGGCGCTTGACGACGTA TTTTCCGTTTTCGCC  75 381
APT56_RS11165 2482224 .. 2482254 + -13.4  -3.14132   GGGCAGCGCCGCGAT      CA-CGCCGCCGAA GCCGTA TTCGGCGGCGGTG       TTCATGGACGCCAGC  72 394
APT56_RS11180 2486450 .. 2486471 +  -7.9  -3.14132   CGCGCTGCCCGCCCG           GGCCCCG-CG GCG CGTCGGGACC           TTGCTGCGGACGAAC  55 71
APT56_RS11200 2489729 .. 2489746 +  -9.1  -3.05384   ATGCACACTGTCAGC             CGCGC-CG CGA CGAGCGCG             TTGCATAACGACAGG  60 126
APT56_RS11205 2490685 .. 2490697 +  -4.7  -3.66178   CCACGGGGCTGAACC                CGCGG CGT CCTCG                TTTACCCTTGGGCGG  55 43
APT56_RS11210 NONE
APT56_RS11215 NONE
APT56_RS11220 2493687 .. 2493720 + -18.1  -2.78712   CGGCGCCAGCGCTTT     GGGCGGGCCGCCGCCG CGA TGGCGGCG-CCCGCCG     TCGTTCACTTCGCCG  89 100
APT56_RS11245 NONE
APT56_RS11250 2500618 .. 2500647 +  -5.6  -3.53811   GTTCTCGGCCACCGG       CAGGCCCTGGGCG ATCAA CGCGC-GCGCCTG       TTTGACGCCGATGCC  54 188
APT56_RS11265 2502984 .. 2502996 +  -2.6  -4.14511   TGCGCCGGTCATAGG                CGTC CAATT GGCG                TTTTGGCATGAAATT  61 443
APT56_RS11275 2503809 .. 2503830 + -15.9  -3.33509   GCAACCATGAAAAAA           GGGCCTGAC TCGC GTCAGGCCC            TTGCCTTATTTGCCG  88 64
APT56_RS11295 NONE
APT56_RS11300 NONE
APT56_RS11305 NONE
APT56_RS11310 NONE
APT56_RS11315 NONE
APT56_RS11320 2515281 .. 2515293 +  -4.7   -3.9461   GATGGTCGAGAGCGC                CGCGC TCA GCGCC                TTGTTGTTGCGCAGC  60 360
APT56_RS11340 2521724 .. 2521752 + -10.9  -3.01712   CCAGGCCCTCGGGCA        GGCTGCGCACG AAATCGC CGAGCGCGGCC        TGTTCCAGCGCCCGC  62 380
APT56_RS11350 2526181 .. 2526197 +  -2.1  -2.79302   ATGGGCGCGACGAAT              TCGGATG GAT CGGCCGG              TGTCATCGCCATGAT  40 147
APT56_RS11355 2526696 .. 2526713 +  -4.7  -3.93288   GCCGCCGCCCGCTGG             ACGGCGC CATG GCGTCGC              TTTCCTTCCGTCGCC  60 47
APT56_RS11360 2528356 .. 2528368 +  -3.3  -3.36492   GGTCACCAGGCTGAG                CAGCG GAT CGGTG                TTGTCGAATTCGAAG  47 366
APT56_RS11380 2532395 .. 2532409 + -12.8  -3.15544   GTTGCCAAACGGCGC               CCGGCG TCG CGCCGG               TTCATGGCGCTAGCG  72 46
APT56_RS11405 NONE
APT56_RS11410 2539133 .. 2539145 +  -3.3   -3.7829   CCGATCCGCACCGTC                AGGTC GCC GACCG                TTTCGTAGCTGTAGT  55 233
APT56_RS11420 NONE
APT56_RS11425 2542230 .. 2542246 +  -3.5  -2.64616   ACCTGCGCGCCGAAC              CGGCGGG AGG CACGCCA              TGATCTCGCTGCGCG  39 6
APT56_RS11430 2542688 .. 2542721 +  -8.8  -2.61383   TCATCAGCGTCGAGG    GC-G-GCGCCGCGCCC AGGT GGACGCGGTGCACCGC     ATTCTGGATCGACAT  51 255
APT56_RS11445 2545350 .. 2545367 +    -2  -3.39749   TCTGCCTGCTGTCGG             C-CGTCA AGGTC TGACGCG             TTATCCACTTATTGA  45 12
APT56_RS11450 2545714 .. 2545736 +  -7.6  -3.59979   ACGCTATCCAAAGGG           CGCTCGCATG ATC CCTACGAGCG           TTTCGAGTGGCCCGC  63 96
APT56_RS11455 NONE
APT56_RS11460 NONE
APT56_RS11465 NONE
APT56_RS11470 NONE
APT56_RS11475 2549449 .. 2549464 + -10.4  -2.80994   GCCCAAACAAAAACA              GCGCCT TTTA AGGCGC               TGTCCTGGACTTGCC  60 116
APT56_RS11500 NONE
APT56_RS11505 2554920 .. 2554951 + -20.8  -2.98823   CAAGACCCGCTCCCG      CGCGCCGGCCCGCG TTCG CGGGGGCCGGCGTG       TCTGTATGAGGGCGC 100 75
APT56_RS11520 2559083 .. 2559117 + -10.8  -4.61527   TCGTTACGGATGGCG     GCGCGTGAATATTGAA AGT TCCATTATTCATGCGC     TTTTTCAGCCATTTT  91 100
APT56_RS11525 2559942 .. 2559970 + -21.7  -3.59979   GCCGATGTGGAAAAA        CGCCCCGGCAGGA GAT TCCCGCCGGGGCG        TTTCGCATCAGGGCG 100 147
APT56_RS11535 2563029 .. 2563076 + -14.9  -2.62263   GTTGAACATCCTAGT CGCCATGCGCCGGGCAGGGGGAT CGCC GTCCCCC-GCGCGGCA-ATGGCG TAATATGAGAACCCT  74 36
APT56_RS11540 2563762 .. 2563776 + -12.8  -5.49234   TGGCGCAATAAAAAA               CCGGCC GTT GGCCGG               TTTTTTATTGCGTGT 100 50
APT56_RS11550 NONE
APT56_RS11555 NONE
APT56_RS11560 2568415 .. 2568444 + -17.8  -2.84812   GCGGCCAGCAAGGCC       CGGCGCGGCCCC TGTCTC GGGGCCGCGCCC        TGTGCTACTCTGGCT  87 101
APT56_RS11565 NONE
APT56_RS11570 NONE
APT56_RS11575 NONE
APT56_RS11580 2573650 .. 2573682 + -32.1  -5.75342   ACGGTGGATCCGCAG      CCGCGGTGGCGGGCG TCA CGCCCGCCACCGCGG      TTTTTTTTCCGCCGG 100 47
APT56_RS11595 2579280 .. 2579298 + -10.2  -3.76492   CCCGGTAGGATTCCC             AGGGCCTG CAG CAGGCCCG             TTTCGTGCAGTTCCG  74 57
        nadE 2581410 .. 2581468 +  -8.5  -3.33792   CGCCGCCGGGTTGAG CCGCCTGCGGGTTTTCCCGGCAGGCGCG GGAT CGGGCCAGCCGGGCCGGGC-GCCGGTGG TATTCTCTCAATCAT  60 27
APT56_RS11605 2581917 .. 2581945 + -13.9  -5.40072   AGCGCTGGGTTGACG        TTCGGGGGGATCG CAA TGATCACCCCGAA        TTTTTTTGGGAAGCG 100 58
APT56_RS11630 NONE
APT56_RS11635 2588913 .. 2588942 +  -2.7  -3.53811   GGAGATCCTACGGGT       GAC-GCGCGACGCG TAG TGGGCCGTGCCGTC       TTTGCGGGCCATCCC  47 10
APT56_RS11695 2600017 .. 2600042 + -19.1  -2.94313   CGGCCCTCCGACCAG         CATGGGACCGG CTTG CCGGTCCCATG          TCGTTGTTGCGGTCT  93 53
APT56_RS11700 NONE
APT56_RS11705 2602369 .. 2602387 +  -7.3  -5.03314   AGCCCCAACTGCGTT             GCGCGCC CTGAA GCCGCGC             TTTTTTCAGAATCCA  95 15
APT56_RS11710 2604634 .. 2604685 + -21.7  -3.15249   CACGGCCGGGCCCGA T-GCGACGCCCCGTGCCG-CTCCCG CCCC CGGGAGACGGCGCGGGGCATTGCCA TTCGTGGCGGGTCTA 100 66
APT56_RS11720 NONE
APT56_RS11725 2608972 .. 2609017 + -20.4  -4.00526   GGCCGGTCGTTTCCC GCGGCGGCCGCGCGCCGTGCCC TGAC GGGC-CGGCTC-CGTCCGCCGC TTTCGTTCTACGGTT 100 87
APT56_RS11730 NONE
APT56_RS11735 NONE
APT56_RS11740 2612751 .. 2612809 +  -7.7  -2.78715   CGTGGCGCGGGCGCC -CGCCGGCAAAGCGGCGGGCCCTCGCCG CGGC CCGCGCGGGCCGGCCGCGCCACAGGCGG TATCATGGCGGCCTT  52 43
APT56_RS11745 2613446 .. 2613474 +  -5.9  -4.18018   GGAAGACCCGAGCAT        TGGCATGGGCGGC ATT GCCGCTGATGGTA        TTTTCGCTGCAGGCG  66 76
APT56_RS11750 2614000 .. 2614014 +    -7  -4.07568   CTGGACAGCTTCAGC               GCGCCC TGA GGGGGC               TTTTCCGCCGCGCCG  68 17
APT56_RS11755 2614744 .. 2614758 +  -8.5  -4.63486   AACCCCTTTTTCCGG               GCCGC CGCGC GCGGC               TTTTCTTCACCCCAT  88 40
APT56_RS11760 NONE
APT56_RS11765 2617510 .. 2617530 +  -4.5  -3.54029   CACCCAGACGGGCGC            GCCGGGCGC GAT GCGCATTGC            TTGTGCTTCGTCGGC  54 507
APT56_RS11775 2618628 .. 2618667 +  -9.2  -4.10552   AGGGGGCCGGCGCTC  GCCGGCCGCGCACAGATT TTTC AGTCTGTTTCCGGCCGCC   TTTCATTTCATGAAG  76 70
APT56_RS11785 2621114 .. 2621128 +  -4.2  -5.28176   GCAGTAGTCAGGGAG               CCTTGC ATG GCAAAG               TTTTTTATCGATAGA  93 34
APT56_RS11790 NONE
APT56_RS11795 2625820 .. 2625845 + -20.5  -3.68351   GACAGCATGAAAAAA         GCGGGCCGATC GAAA GATCGGCCCGC          TTTGCGTGGTGCGCG 100 56
APT56_RS11810 2627981 .. 2627997 + -13.7  -4.74103   CGCTGCGCGGGTCGC              TGCCCCC CAA GGGGGCA              TTTTTGCCTTGGGGC 100 150
        aceE NONE
APT56_RS11840 NONE
APT56_RS11845 2640297 .. 2640327 + -17.7  -4.41494   CGGACGCAGGCACCG      CAGCCCGAAGCGCC TCCC GGC-CTTCGGGCTG       TTTTCATTGCGGCTC 100 66
APT56_RS11850 2641366 .. 2641379 +  -8.1  -3.61178   CTGGCCCGGCCTGCC               TGGCG CGAG CGCCA                TTTCCCGTGCCTGCG  63 96
APT56_RS11855 2642472 .. 2642489 +  -9.8  -3.57971   GCGCGGCAATCGTTG             CCGCGC GCGCTG GCGCGG              TTTACGCCTGGGTAT  68 123
APT56_RS11885 NONE
APT56_RS11890 NONE
APT56_RS11895 NONE
        motB NONE
APT56_RS11905 NONE
APT56_RS11910 NONE
APT56_RS11915 2654988 .. 2655015 + -12.1  -4.41895   CCCAGGGAGATGGGC        GCGCCATATTG TGGAAT CGATATGGCGC         TTTTCCTTAACGATT  95 100
APT56_RS11920 NONE
APT56_RS11925 NONE
APT56_RS11930 2658717 .. 2658731 + -11.4  -3.41051   GGGCGACCGGGGACA               CCGCGT TTG ACGCGG               TTGTGATCCCGATCG  70 16
APT56_RS11935 NONE
APT56_RS11940 2659845 .. 2659867 + -14.9  -2.75992   CGGGCCCGCCTGCCG           CCATGCCCG CTGGC CGGGCATGG           TCGTATTCCCTAAGG  75 63
APT56_RS11945 NONE
APT56_RS11950 NONE
APT56_RS11955 NONE
APT56_RS11960 2668014 .. 2668046 + -22.2  -3.57263   GCCGGTATCGGCCAA      GACAAACAGCCCGC TTCAT GCGGGCTGTTTGTC      TTTGAAGATGAAGGT 100 56
APT56_RS11980 NONE
        flgC 2670756 .. 2670785 +  -8.5  -4.57569   ATCCTGATCCTCCTG       ATTCCGCGC-GCCG CGC CGCCCGCGCGGAAG       TTTTTGAAGAAGTGA  84 34
        flgD 2671493 .. 2671510 +  -9.1  -3.78775   ACGTGCGCAAGGTGA             TCGGCTG AGGC CAGCCGG              TTTGATGATCAGCCG  71 18
        flgE NONE
        flgF NONE
        flgG NONE
APT56_RS12010 NONE
APT56_RS12015 NONE
        flgJ NONE
APT56_RS12025 NONE
APT56_RS12030 2680629 .. 2680660 + -14.5  -2.91264   CATGTTGCGCCCTTA      CGGACGCTTCCGGT GGCAA GCCGGA-GCGTCCG      TGTGTGCGTACAGGG  77 79
APT56_RS12035 2682665 .. 2682696 + -14.4  -3.16191   AAACACCCCCCTTTT      ACGTTGGGGCGGCA ATGG TGCCGCCCTGACGG       TTACTGGAAATATCG  76 82
APT56_RS12040 2684579 .. 2684589 +    -4  -4.57073   GCGCCGGCGGACGAT                 GATT GGG AATC                 TTTTTGACGCCGGTC  71 8
APT56_RS12045 2685146 .. 2685190 + -12.3  -5.01811   GGGCCACCGCGTACG TCGCCCTGACGCGAACCCTTC CGCAA GGAGGGTTCGC--CAGGGTGG TTTTTCATTTGGTCA 100 75
APT56_RS12050 2687026 .. 2687060 + -19.3  -2.53015   CCGGCCCGGCTCCGG    C-CGACCCGGCGCCCG TTCA CGGCCGCCGGGTCGAG     TGCCTTGCGCGATGT  89 86
APT56_RS12055 2688903 .. 2688916 +  -9.5  -5.32944   CATCGAATGAAAAAA               CGGCC CTCG GGCCG                TTTTTTCATTGTGCC 100 53
        fliE 2701008 .. 2701037 + -12.9  -3.45571   CCGCGCGAAGGCACG       TTGCCAGCGGTTG TTGT CAGCCGTTGGCGA        TTGGTGTTTCCGCCG  78 84
APT56_RS12165 2707704 .. 2707747 + -11.1  -3.30124   TCAGGTCGGCCGCCT CCAGTTGCATCCAG-GCCTGC GCCA GCGGGTGCTGGATGCC-CTGG TTCTGGCCGATGGGC  66 375
APT56_RS12190 NONE
APT56_RS12195 NONE
APT56_RS12200 2714167 .. 2714180 +  -2.3  -3.27109   TGCCGCCGTCCCTGG               CGACA TGGC TGCCG                TATTGATTAGCTTCA  44 6
APT56_RS12205 2715758 .. 2715777 +   -15  -5.96219   GCGCCCCATGCAAAA            GCCGCTCC CTGG GGAGCGGC             TTTTTTTTGTCCGTC 100 46
APT56_RS12240 2723444 .. 2723463 +   -15  -3.07192   ATCGAATCACACCAA            TGCCCCGG CCCG CCGGGGCA             TGTCTTAGCAAAATT  80 162
APT56_RS12245 2724385 .. 2724418 +  -8.2  -4.46073   TCGGGGTAGTCCTTA     CAGGCCGGCGCTAGA TATTT TCTAGT-CCGGCCTA     TTTCTTGTCTTACAC  84 43
APT56_RS12250 NONE
APT56_RS12255 2725813 .. 2725870 + -21.4  -2.61272   CAGGATTCCTGCTTT CGCGCCGTCCTATCCATCGCTACGCGG CACGC CTGTGCGGCGATGGATCG-ACGGCGCG GGTTTTTCACCGTAT 100 81
APT56_RS12260 2726753 .. 2726769 +  -3.7  -2.71364   CTGAGGAGACCGTCA              TATGTTG GGC CAGCGTA              TCGTTACCGCCGTCA  42 90
APT56_RS12265 NONE
APT56_RS12270 2728834 .. 2728851 +  -3.3  -2.54999   TGCGTATCAGCGCCC             CGGC-CCG CCT CGTCGCCG             ATTCCTGGATTTCCT  39 52
APT56_RS12275 NONE
APT56_RS12280 2732627 .. 2732650 +  -9.4  -4.25074   TACGCTTGAAAACAA          GGGAGGGGCC CGCC GGCCCGGCCC           TTTTGCCGTTTAGTG  81 48
APT56_RS12285 NONE
APT56_RS12290 2734384 .. 2734427 +  -4.5  -3.36578   GACGCTGGAAAAAGA CTAG-GGCGCAGCCACGCCGCC CTG GGC-GCGTC-CGGCGCCGCAAG ATTTATTTCATTTCG  49 22
        fabZ NONE
APT56_RS12300 NONE
APT56_RS12305 NONE
        rnhB NONE
APT56_RS12315 2738269 .. 2738295 +  -2.9  -3.65351   CGCCAGGCGCTGGCG         GCTGGGGCG CGCTGACAC CGTCCCATC         TTTCCGTGCGGCTCC  51 11
APT56_RS12320 2738867 .. 2738880 +  -5.3  -4.28049   CTGCGCTACTGATTA               TGTGT GGTT ACACA                TTTTGACATTTTGAG  68 29
APT56_RS12325 NONE
APT56_RS12330 2739903 .. 2739935 + -19.1  -4.07885   GGCCCGTTTGCCGCC      AGACAAGGGCGCGCC GGT GGCGCGCCCTTGGCG      TTTTCAGCCGCGGTC 100 53
APT56_RS12340 2743346 .. 2743370 +   -10   -5.4505   CCGCGTTGACGCAAA         CCCCCGCATTC GAAA GAG-GCGGGGG          TTTTTTCTTGGGGCG 100 46
APT56_RS12370 2749886 .. 2749905 +  -5.6  -3.53012   GCGCTAGGGCGTGGC            GGCGTGGA AGGC TCCTTGCC             TTTGCGCGCCGGCCC  55 34
APT56_RS12375 NONE
APT56_RS12380 2752196 .. 2752218 +  -8.4  -3.91506   CTTTGCGCGACGCCC           GCGTGTCGTG CTT CATGATGCGC           TCTTTTTCGCGCTGC  69 50
APT56_RS12390 NONE
APT56_RS12395 2753761 .. 2753772 +  -4.4  -3.65351   TAACATTGACGGCGC                CGTA CCCT TACG                 TTTACGTCAACGTCA  53 128
APT56_RS12400 NONE
APT56_RS12405 NONE
APT56_RS12410 NONE
APT56_RS12415 2757606 .. 2757631 + -21.9  -2.58579   ACGCCGCGTTGAGCC         GCTGGCGGCGG CCGT CCGCCGCCAGC          CTTGTCGCGCCTTGA 100 29
APT56_RS12420 2758732 .. 2758762 +    -6  -3.55444   CAGCCCTTGGTGAAG       CTGACACCCTGGAT CAG GTCCAGGTTGACCG       TTTGCGGAATGAAGA  57 407
APT56_RS12430 NONE
APT56_RS12435 NONE
APT56_RS12440 NONE
APT56_RS12445 NONE
APT56_RS12450 2764227 .. 2764242 + -11.8  -5.45652   TGGCCTGTCCCGAAA              CCCGCC TCGT GGCGGG               TTTTTTATTGGCCGT 100 51
APT56_RS12455 NONE
APT56_RS12460 NONE
APT56_RS12465 NONE
APT56_RS12470 NONE
APT56_RS12475 2768395 .. 2768437 + -29.3  -4.09685   CCGCCGCGGACTTCC GGCCCGCCGTCATG-GCCGC TCGC GCGGCGCATGGCGGCGGGCC TTTTCACGCCTGCGG 100 61
APT56_RS12485 2771947 .. 2771964 + -14.1  -3.92659   AGGAAGACAGGAAAA             CCGCCCC GACA GGGGCGG              TTTCCATTTTGGGCC  88 84
APT56_RS12520 2777060 .. 2777082 +  -3.2  -4.14392   AGTTCCACTTGATGC           CCTCGGTGCC GAA GACGCCGGGC           TTTTCGCCCTTGAGC  63 268
APT56_RS12545 2782183 .. 2782222 +  -4.2  -5.41143   CAAGCGGCTCGACAA GGAC-GCCGCCG-TGCCG CAATAA CGGCGCCGGCAACCGTCC  TTTTTTTCAGGCCTC  93 4
APT56_RS12555 NONE
APT56_RS12560 2785321 .. 2785336 +    -6  -2.64803   CCACGCCTTCCGGCT              CGCCGC CCAT GCGGCA               TCCCTTTGAACCTCC  45 1
APT56_RS12565 2786508 .. 2786522 +  -9.2  -4.36914   GTTCCTTGATCTCGC               GCGCCG CCG TGGCGC               TTTTCTGCGCCAGGG  78 491
APT56_RS12580 2791198 .. 2791210 + -10.5  -3.51934   CGCTTTTCCACGTCC                GGCCG CCA CGGCC                TATTTCTGGCCGGCC  69 122
APT56_RS12610 2798786 .. 2798817 +    -3  -2.76815   CGCTGCCGATCGACC     CGGTGCGC-GGCTG ACGCCA TGGCCAGCG-ACCG      CTTGTTCGAGCCGCT  40 12
APT56_RS12615 2799744 .. 2799773 +  -4.8  -3.78775   GTTGAAGCGGGGCGC       GCGCCGGCCTGG CACCAT CAAGTCCGGCGG        TTTGGTACTAAGCGG  58 36
APT56_RS12620 2801440 .. 2801462 +  -4.1  -3.08934   CCGCTGGACGACACC           TGGCTGC AATAGGAGA GCGGCCA           TGTTGCGCTATCTCG  45 14
APT56_RS12625 NONE
APT56_RS12630 2803322 .. 2803336 +  -2.1  -2.61274   TGGCCAGCAAACGGA              GCAGCT GATG AGC-GC               CTTGCTTGAAGTCCG  38 18
APT56_RS12635 NONE
APT56_RS12640 NONE
APT56_RS12645 NONE
APT56_RS12650 NONE
APT56_RS12655 2809903 .. 2809920 +  -3.3  -3.28712   TTGACGATGTCGATG             CC-GCCGC CGC GCCGCAGG             TTCTGCAACCGGAAC  47 309
APT56_RS12695 2823632 .. 2823654 + -11.2  -4.29738   TGACGGACTGCACCG           CCTCGGCCAC CTG GCGGCTGAGG           TTTTCCTGGATCTGC  85 278
APT56_RS12715 2828598 .. 2828608 +  -2.4  -4.09864   TGACGCAAGGAGGCG                 CCGC CAT GCTG                 TTTTCCAACATGACT  58 38
APT56_RS12720 2828850 .. 2828871 + -14.4  -5.09225   GACCGCAATGCCAAA           GGCGCCGG CTTTGT CCGGCGCC            TTTTTTCGCTGGCAT 100 60
APT56_RS12730 2831312 .. 2831324 +  -6.2  -3.28712   GTTGGCTGGCGCGTC                GCGG CGGGC CCGC                TTCTCGGCGGCCAGC  51 75
APT56_RS12745 2834252 .. 2834286 + -14.3  -4.13304   ACGGAATTACCCTGG    GACGT-CGCGGCGCGA CCGA TCGCGCCGCGCGCGTG     TTTTCCGAATCATTT  93 117
APT56_RS12750 2835325 .. 2835341 + -13.7  -2.83228   CGTCCAGGGTCATCT              CGACGGC CCA GCCGTCG              TCGTCTTCGTTCTTG  68 481
APT56_RS12790 NONE
APT56_RS12795 2844820 .. 2844832 +  -3.3  -4.25104   GTCGCAGCGGGTGCT                GTCCT GCA AGGTC                TTTTCCTGGCGCAGG  67 327
APT56_RS12820 2851215 .. 2851245 + -10.4  -3.16177   GCGGTTGTCCAGGAA      CGCGCGC-ACGTC GCGCCA GTCGTAGCGCGCG       TTGCGTGTCTGCAAT  60 514
APT56_RS12860 2859772 .. 2859792 +  -8.9  -3.14132   ATGGACGGCCTGTTC            CGGCGTCAG GCG CTCGCGCCG            TTCCTGGCCGAGCGC  57 309
APT56_RS12875 2862052 .. 2862089 +  -3.1   -2.8552   AATACGGTTTTCCAG   CCAGTTTCCGCCCCGGC GCGC GCCGGGCCGCTCATAGG    GTTTCATCCATGCAA  41 49
APT56_RS12880 2862944 .. 2862959 +  -6.8  -2.50016   TCAAGGCGCCCGGCG              CG-GCCC GGC GGGCACG              ATCTTCATCATCGGC  47 64
APT56_RS12890 NONE
APT56_RS12895 2867198 .. 2867216 + -17.4  -3.01712   CACGGATTGCAGTAC             GCGCCGGC CGG GCCGGCGC             TCTTGGAGAAACGCA  88 139
        narZ NONE
        narH NONE
APT56_RS12910 2873193 .. 2873205 +  -4.7  -2.90496   CTTCTATCCCCGGGC                GCCGG TCA CCCGC                TAATTTCCAGGACAC  45 10
APT56_RS12915 NONE
APT56_RS12920 2874707 .. 2874755 +   -18  -2.72855   CCCGCCCTGGCGGCG GCCCCGGCGGCCTCGGTCGCCAC CCTG GCGCCGACCGCG-CCGCGGGGGC TGATTGACGCCTTTG  87 49
APT56_RS12925 NONE
APT56_RS12930 2876377 .. 2876393 +  -3.6  -3.71913   CTGTCCTTTGTTCAC              GGAGTC CGCAT GACCCC              TGTTTTCGGTATCGC  54 13
APT56_RS12935 NONE
APT56_RS12940 NONE
APT56_RS12945 2879631 .. 2879657 +  -9.4  -3.83026   TCCGGTCTGACGGCG        CCGCGCCGGCT CGCGCT GGCCG-CGCGG         TTTGATCTGCGACAA  73 31
APT56_RS12950 NONE
APT56_RS12955 NONE
APT56_RS12960 2882351 .. 2882382 +  -8.6  -2.62184   CGTCCAGTAGGCCAC      TGCCGG-GCGCATGC CGA GCGCGCGCGCCGCCA      TCATCTGGCCCGGCG  51 334
APT56_RS12975 NONE
APT56_RS12980 NONE
APT56_RS12985 2889069 .. 2889122 + -10.2  -3.55444   CCTGCGCCAGCAGGC GCCGCGCCACGCGCATGCGCAGCAGT TGCA GCAGTTGCGCC-G-GCGTGGTGCCGC TTTGCAGCGTGAAGC  67 252
APT56_RS12995 NONE
APT56_RS13000 NONE
APT56_RS13005 NONE
APT56_RS13010 NONE
APT56_RS13015 2894925 .. 2894975 + -12.4   -3.0497   ACGCCCGGCATGCTC TGCGGCGCCAGCGGCTGCCAGT CCGAGCC GTTGGCGGACGCGGGCGCGGCG TCTTCGGCCTGGTGT  66 398
APT56_RS13025 2897068 .. 2897095 +  -9.8   -3.6715   TGGATCAGCAGGGGA        TCGGGCTTCTGC GCCA GCAGATGCACGA         TTTCGAGTTCGATCG  67 431
APT56_RS13035 2899257 .. 2899270 +  -2.3  -2.52623   GCTTCGGCGCGCCCG               TGCCG GAAC CGGAA                ATCTTCTGAACCCGC  37 3
APT56_RS13040 NONE
APT56_RS13045 2901116 .. 2901134 + -13.1  -5.45802   AAGACCTGATTCCCA             CCCCGGC CTGGA GCCGGGG             TTTTTGTTTTCCGCG 100 50
APT56_RS13060 2904188 .. 2904216 +   -11  -3.18681   CCTCGCCAAAAAAAA       CGCCGGCCCGGAA TGAC TTCCAG-CCGGCG        TTCGTGACGTTGCGG  68 159
APT56_RS13075 NONE
APT56_RS13080 2908059 .. 2908083 +  -5.5  -3.18681   GCTAGCCGCGCGTCA          TGCCGGCGACG GGG CGGCGCGGGGA          TTCATGGGCTTGCCG  51 36
APT56_RS13090 2910673 .. 2910687 +  -4.2  -3.62046   AGCGTGGCGGGATCG               GGCG GCAGGAA CGCC               TTGTTCGCGGCGTCG  51 503
APT56_RS13105 2912383 .. 2912417 + -25.1  -4.18197   GGGCAAGAAAAGCGA    CGGGGCAGG-CCGGCG GGAT CGCCGGGCCTGCCCCG     TTTTGCGTGCCGCGT 100 56
APT56_RS13120 2915966 .. 2915990 + -16.4  -5.14563   CGCCCGGCACGGCAA          GCCGGCTCCC GTACA GGGGGCCGGC          TTTTTTCATGGGCGC 100 65
APT56_RS13130 NONE
APT56_RS13135 2918676 .. 2918688 + -10.5  -2.66634   ATCGGTATTTGTCCG                GCGCG CGG CGCGC                TCCTATCCTGGCCTG  59 123
APT56_RS13140 2919759 .. 2919770 +  -7.2  -3.96093   GCTCCAGTAGACGCG                CCGC AACA GCGG                 TTTCATATTCATATC  67 31
APT56_RS13145 2920703 .. 2920717 +  -2.7  -3.01712   AGGGCAGCTGAGCCT               CGCGC CGCCC GCCCG               TGTTGGAAAAGACCG  41 30
APT56_RS13150 NONE
APT56_RS13155 NONE
APT56_RS13160 NONE
APT56_RS13165 NONE
APT56_RS13170 NONE
APT56_RS13175 2926615 .. 2926627 +  -9.1  -2.84732   CTGACCTTTGACCCG                CTGCG CCT CGCAG                TGTGATGCCTTTCCG  58 8
APT56_RS13180 NONE
APT56_RS13185 2928508 .. 2928518 +  -3.2  -3.59023   TGCAAATGACTGCGT                 TTCC TTA GGGA                 TTCTGATTATGTAGA  51 47
APT56_RS13190 2928949 .. 2928992 +  -4.4  -3.07994   ATCAACTGGCATTTC TCGGCTAGGCCTCGTGCTCGG CTC CCTCACAC-AGGCCTCGGCGA TTCCATGAACTTCCA  45 18
APT56_RS13195 NONE
APT56_RS13200 2932360 .. 2932381 +  -7.1  -2.78384   GCTAGGGCGTCCGCC           GCGCGGCGC TACG GCGCCGGCC            TGTCGTGAAGGCAGG  48 73
APT56_RS13205 NONE
APT56_RS13210 2934990 .. 2935022 +  -3.1  -3.67597   TGTCGGAAGTATGGG      GCGGGGGTGTGCGGC GTT GCCGCTGAAACCCGG      TTATTGCATCGGCAG  51 220
APT56_RS13215 2936519 .. 2936553 +   -10  -3.53343   GATCACGCCCCACCA    GCTGGCGCTGCT-GCG GCGGG CGCTGGCGGCGCC-GC    TTTGCGGCCAGAATT  65 275
APT56_RS13285 2951404 .. 2951443 +    -9  -3.88985   GCTGGCCGAAGCCTG  AAGCTCGCGGCCGCCGGG TTGG CGGGGCGGCCGCAAGCGG   TTTGTCAGGGGTTTT  69 25
APT56_RS13290 2952271 .. 2952284 +  -2.3   -3.5944   GCGTAATGGCCCGGC               ACCAC GGTC GTGGG                TTTGAGGCTGTCGAT  50 263
APT56_RS13305 NONE
APT56_RS13310 NONE
APT56_RS13315 NONE
APT56_RS13320 2958665 .. 2958681 +  -7.2  -3.24747   CATCGAGGAACAGGG              TCGCGG GCAGG CCGCGG              TTGCTCATCTGGCGC  53 173
APT56_RS13330 2960781 .. 2960791 +  -2.4  -3.83844   CGCGGCTTTCGTCGA                 GCCC TCC GGCC                 TTCTTCATTCCTGCG  55 214
APT56_RS13335 2961630 .. 2961656 + -25.2  -4.65895   TAAGCTTCCGGGAAA         CGCCCGGACCGC GCC GCGGTCCGGGCG         TTTTTCAGTCCGGCG 100 38
APT56_RS13340 NONE
APT56_RS13345 2963175 .. 2963197 +    -9  -3.01712   CTGTAAGGGCGGTAT           CGGCGCCGGG CGG CTTGCCGCCG           TCTTGGCGCCGCCAG  56 35
APT56_RS13410 NONE
APT56_RS13415 2979781 .. 2979806 +  -3.1  -2.85078   CAGGGCCGCCTCGCG         TCCATCAGGGC GCGC GCCCCGACGAA          ATTTGATGAAATATC  41 54
APT56_RS13420 2980617 .. 2980644 + -18.4  -5.75945   CGGCGCAAAGAAAAA        GCCGGCGGCTCC TTGC GGAACCGCCGGC         TTTTTTTTGCGCCAT 100 103
APT56_RS13430 2985096 .. 2985113 +  -9.8   -5.4505   AGTCAGTCAAACAAA             CCCGCC CCACGA GGCGGG              TTTTTTGTTGCCGCC 100 235
APT56_RS13435 2987108 .. 2987157 +  -4.7  -3.28712   GCGGTTCGTCCAGCA GCAGCAGGCGCGGCCGCCGCA CCAGCGCC TGCGCCAGCGAGGCCAGCTGC TTCTGGCCGCCGGAC  49 381
APT56_RS13460 NONE
APT56_RS13465 2992558 .. 2992568 +  -8.2   -2.8001   GCCGTCGAGCGAGGC                 GCCG ACG CGGC                 TGTAGTAGAACTTGT  52 84
        garD 3007333 .. 3007349 +  -2.2  -4.19238   CGCTGTTCAATCCGG             GCC-CGG TGAC CTGAGGC              TTTTCCCGTTGGCGG  58 12
APT56_RS13525 3008491 .. 3008525 + -21.4  -5.44119   GCCCTCCAAAAGACC     GCGGACCGTGGAGCGC CTG GCGCCGCACGGTCCGC     TTTTTTTGGAATGCC 100 62
APT56_RS13535 3009889 .. 3009924 +  -4.5  -3.04398   GATCCCGAGTCTTCC    GACTTCACGTGCGCG CAACCT CGCGCACGCGCCATC     CTTTTCCGCGCGGCC  45 106
APT56_RS13540 3010351 .. 3010390 + -12.8  -3.01712   TTGTGGGTCGTGTTT  GCGCTG-TGCCGCGCCG TGAGCGC CGGCGCGGCGGCCGTGC  TGTTCGGCGCCAGCG  71 51
APT56_RS13545 3011210 .. 3011225 +  -3.2  -2.57931   GGTTGATGTCGCCAT              CGTAGCC GGC GGC-GCG              CTTGTCCGGCATGAC  39 21
APT56_RS13595 3024521 .. 3024556 + -11.8  -3.39449   CACGCGGCGGAAGAT    CTGCCAGCCGCTGGCGC CCA GCGTCAGCG-CGGCCAG    TTCCTCTTCCTGGCC  69 329
APT56_RS13615 NONE
APT56_RS13620 3030095 .. 3030106 +  -4.4  -2.71712   GGTCCCGTTCCAGCT                CGAT GCGC ATCG                 CTTTCAGCAACGCCC  42 62
APT56_RS13630 NONE
APT56_RS13635 NONE
APT56_RS13640 3032139 .. 3032158 +  -3.4  -3.27923   CAGCTGGCCGACGGC            CGCAGCGA GATT TCGGCGCG             TTGATGCTGTTACAA  45 2
APT56_RS13645 3034741 .. 3034756 +  -2.5  -4.08692   GGCAAGGGCCGTTGG              CGTGT TTTAAT ACGCG               TTTTACGAGCCCTTG  58 60
APT56_RS13650 3036491 .. 3036531 + -16.1  -3.32844   CCGGGATGGCCTGAC CCG-GCGCGGCGGCGACG GGCAGG CGTCGCGGGCGCGCGCGG  TTATCAGGTCAGGGG  88 46
APT56_RS13715 3060432 .. 3060449 +    -2   -4.1822   GCGATCGCTTCGTGC             TGCGCTC CTTGC GAGC-CA             TTTCTTCCAATGACC  58 104
APT56_RS13720 3061105 .. 3061124 +  -7.1  -2.62184   CCAATGCCAAGGCGG            CGCGGGCC GGCAA GGCC-GCG            TGATATCGACACGAC  47 3
APT56_RS13725 3061529 .. 3061541 +  -9.1  -3.36648   GGCGACCCCGCGCGT                GCCGT TGA ACGGC                TTCTCGCATGTCTTG  64 145
APT56_RS13730 3063303 .. 3063329 + -15.8  -2.65808   AGGCCGTGCACCGCC         CGGCCGCGTCCG GCC CGGACCTGGCCG         TCCCTTATTGGAGAT  78 98
APT56_RS13735 3063769 .. 3063795 + -17.2  -3.15544   CTGACGCAGCGCCGG         GCGGCGGCGCGG AAC TCACGCCGCCGC         TTCCTCCCCGTGCGC  88 37
APT56_RS13765 3069854 .. 3069874 + -11.1  -2.93817   GTAAAGTAAGAAATG            GGCCGGTTT TCA GGACCGGCC            TGCTTCTTCCCGATT  65 63
APT56_RS13780 NONE
APT56_RS13785 NONE
APT56_RS13790 3075447 .. 3075461 +  -8.6  -3.53012   CGTGCGCCGACAGCA               TCGACA GGT TGTCGA               TTTCCGCGCGCACGG  61 220
APT56_RS13800 NONE
APT56_RS13805 3077833 .. 3077849 +  -5.7  -3.53811   GAATCAAAAAGGGGA              CGGCTCG CGC CTGGCCG              TTTAGGCCCCGTGCA  55 55
APT56_RS13810 NONE
APT56_RS13815 3079699 .. 3079732 + -18.3  -2.53876   GGCTGACAAGACAGC     GCTACGGGTGTAGGA ATAT TCCTACACCCGTAGG      TCAGTTCGCATGAAA  86 35
APT56_RS13820 3080583 .. 3080615 +  -8.4  -2.82602   CTGCGCCGCATGAGT     TGCGGCTGAC-CCGT CCGC GTGGCGTCGGCCGCG      TAATTGAGTTTGGTC  55 17
APT56_RS13825 3081237 .. 3081252 +  -7.5  -3.14881   GCGCCCGCCGCTCGC              GGCCG CGAACA CGGCC               TTGCTCAGGGCATTG  53 100
APT56_RS13835 NONE
APT56_RS13840 3084513 .. 3084546 +  -3.1  -3.73402   AAGCCGGCGATCGGC    GCGACCGTGGGCGCG CGCGAC CCCGC-CATGG-CGC     TTTCGTCCAGGATCT  53 161
APT56_RS13850 3087018 .. 3087041 +  -8.8  -3.53012   GGGCGCGCCCTCCGC          CAGGCGCCGCG CCA CGCGCC-CCTG          TTTGCGCGCCACCCA  61 75
APT56_RS13890 3094486 .. 3094509 +  -5.2  -3.83844   GCTGCGGTTCCACAG          CTGTTCCAGC ATCA GCCCGAACAG           TTCTTCCTTGCTGGG  60 450
APT56_RS13900 3096214 .. 3096224 +  -8.2  -3.70674   GTAGTACTGCAGCAT                 GCGG TTG CCGC                 TCTTTTCCGTGGTGC  67 333
APT56_RS13910 3099216 .. 3099235 + -10.7  -5.86061   TGTAAGGCCCGCCCC            GCCCTCC CTCGCC GGAGGGC             TTTTTTTTGCTCGCG 100 36
APT56_RS13915 3100388 .. 3100416 +  -6.5  -2.81547   ATGCGCGCCCGGTCC        CGCCGAACCGCCG CCG TGGCAGTCCGGGG        TCATTCCTGTCCCGG  49 73
APT56_RS13920 NONE
APT56_RS13925 3102940 .. 3102956 +  -3.5  -3.00525   ATGGGACCGGCGTGG              CGGACGG AAA CCGGCCC              TGTCCTTTCGCCGGA  42 43
APT56_RS13930 3103949 .. 3103965 + -15.1  -3.14132   GCCGCTGGCGGCCCG              CGCCCGC TGA GCGGGCG              TTGATGCGGGCCGGG  80 16
APT56_RS13935 3105134 .. 3105147 +  -5.2  -3.91716   CAAACAGGTTGCGGT               GGCC TTCGAT GGCC                TTGTTTAGCACGTAC  60 430
APT56_RS13945 3105973 .. 3105990 +  -8.3  -5.62219   CGTGATGGCGTGGGC             GGGCCGC GTGT GCCGCCC              TTTTTTTGGTCTGTT 100 36
APT56_RS13950 NONE
APT56_RS13955 3107864 .. 3107913 +  -8.4  -4.09739   ATGGGAACCCGCGCC CTGCGGGCGCGGATCCCCGGC ACTGCGTCA GTCGATGG-CCGCGCCCGCCG TTTTCACGACCTTGC  72 89
APT56_RS14010 3117583 .. 3117608 +  -3.8  -3.53012   CAGCCGGCCGACAGC         GCAGCGGCCT AGCACC GGGCCGCCGA          TTTGAAAACGCGAGG  51 14
APT56_RS14020 NONE
APT56_RS14025 NONE
APT56_RS14030 3121205 .. 3121217 +  -9.1  -2.62515   CAAGTTGCCGAAATG                GCCCT TCA AGGGC                TGATATCCAACCATT  55 10
APT56_RS14035 NONE
APT56_RS14040 NONE
APT56_RS14045 NONE
APT56_RS14050 NONE
APT56_RS14055 NONE
APT56_RS14060 3128288 .. 3128302 + -12.8  -2.71011   CAATCCGGCGTGAAC               GGGCGG GTT CCGCCC               TACTTCGCCAACCCT  68 57
APT56_RS14065 3129224 .. 3129241 + -14.1  -3.28924   GCGCGGGTTGACGCG             GCCCCGG CGCG CCGGGGC              TTCTCGACAGCCCTC  78 265
APT56_RS14070 NONE
APT56_RS14075 3131995 .. 3132008 +  -3.7  -3.27298   CGCTGCGCCCAGTCG               GCCGG CGGC CCCGC                TTCGTAGTTGCGCCG  47 386
APT56_RS14105 3137883 .. 3137896 +  -3.7  -3.07816   TAGCGGCTCCCCTCA               CCGCG CGCC CGCCG                TTGAATCGATCCGGG  45 38
APT56_RS14110 NONE
APT56_RS14115 3140317 .. 3140331 +  -5.6  -3.33261   AAGCGCCAGGCGACA               CTCAGG CTG CCTGCG               TTCTGGCGGTTGCCG  53 166
APT56_RS14130 3149680 .. 3149690 +  -2.4  -3.17051   ACTCCGGTGATCTAG                 GGGG GGG CCGC                 TGTTCATGGTGCAAA  42 499
APT56_RS14150 3152260 .. 3152272 +  -6.2  -3.63627   GCCGGGGACCGCCGG                CGGG CACGC CCCG                TTTCGGCTCTGACGC  57 66
APT56_RS14155 3154197 .. 3154215 +  -4.4  -3.55444   AACAGCCACGCCGGG             TGCAGGCC GGC GGCGCGCA             TTTCGGCCATGCCGC  51 304
APT56_RS14165 3155093 .. 3155109 +  -7.9  -2.74741   ACGCAGGCGTCCCGG              CCGGGTT TCA GGCCCGG              TAATTACAGTATCCT  51 188
APT56_RS14170 3156951 .. 3156975 + -17.2   -3.5456   AGGCCCATAAAAAAA          CGCCGCATCG TTGAT CGATGCGGCG          TTCGTTCTTCGGGTT  93 50
APT56_RS14175 3158117 .. 3158154 +  -3.4  -4.63218   CTGACAGCGCGCGGC  GGGCCGCCGCGATCTTGC TGAG GTAAGG-CGC-GCGTCTC   TTTTCTTCCCCCACC  72 0
APT56_RS14180 3158894 .. 3158906 +  -5.5  -5.22943   TTCCCCGGTGCGCCG                TCTCG CGA CGGGA                TTTTTTCCCTTTCAT  90 254
APT56_RS14185 NONE
APT56_RS14190 3161060 .. 3161079 +   -15  -4.72272   GCCGGGCGCCATGGA            CAGCCGCC CGCG GGCGGCTG             TTTTTCGTGGCGCGC 100 46
APT56_RS14200 3162753 .. 3162775 +  -7.6  -2.70932   CGCACTGAGCGCCCG           CGCCCGGC CCGCGCC GCCTGGCG           TGGTTCAGGCCGCCG  51 33
APT56_RS14210 3164236 .. 3164284 + -16.6  -2.62396   GGTGCTGGCCTGATC GGCGCTTGCGGCGTCGGCGCCGC GCCT GCG-CGCCGACGCGGCATTGGCC TACTATCGAGGCATG  81 28
APT56_RS14215 3165376 .. 3165395 +  -5.6  -3.54424   CACCATGTTGCGCAC            GCC-GGGGC GTC GCCGCAGGC            TTTCCCAGAATGGCA  54 285
APT56_RS14225 3168349 .. 3168361 +  -3.4  -3.95555   GAAACCTGTCATTTT                TGAG CGAAA CTCA                TTTCTCGATGATTAT  58 383
APT56_RS14230 3182046 .. 3182062 +  -7.9  -3.14463   ACGATCAGCATGTGG              TCGCGCG AGG CGCGCAA              TTCGTCCAGCACCTT  53 496
APT56_RS14240 NONE
APT56_RS14245 3186344 .. 3186354 +  -8.2  -2.67694   GGACTACCTGCGTTC                 GCCG GGA CGGC                 TGGTGTGATCATGAT  53 7
APT56_RS14250 3187284 .. 3187311 + -22.8  -5.40072   CGCGCTGAACGCCGC        CCGCCCGGCCAA CGTA TTGGCCGGGCGG         TTTTTTTGCCGCCGG 100 33
APT56_RS14255 3188315 .. 3188333 +  -3.7  -3.24188   GTACAAATGCCTGCT             CGTCGCC CGGGT GGCGGCC             TTGCTGCTGCTGTGG  47 72
APT56_RS14260 3189247 .. 3189287 +    -9  -2.55074   GCGACGGGTTCCGTC CGGCGC-CGATAGGC-CCTA GAA TGGGCGCCGATCATGCGCCG TCCCTTCCCCTTGCC  53 72
APT56_RS14265 3189692 .. 3189709 + -14.1  -2.57013   CCCGCTGATCGCTGT             GCCGCGC CCGC GCGCGGC              TCCCTTGGCTTACCG  70 33
APT56_RS14270 3192374 .. 3192387 +  -5.9  -3.28924   TGGCCAACACCGTGG               CCGTG CCGA CGCGG                TTCTCGCGCACCGTG  52 506
APT56_RS14290 3197089 .. 3197121 +  -2.7   -2.8806   TGGAACGCGCAACGA     TGGAGGCCTACC GCGCACAAAA GG-AGGCCGCCA      TGTATCGCCGCATTT  40 110
APT56_RS14295 3198192 .. 3198227 +  -8.3  -3.02511   CCGCCAGCGCCGCGA   TCAGCGCGTCGGTATCG ACCA CGCTGCCG-CGCGC-GA    TGTTCACCAGATAGC  55 260
APT56_RS14305 3200407 .. 3200422 +    -6  -4.18762   ATTGTTCTTGATCGC              GGGACG GTGT CGCCCC               TTTTCAATGGACCTT  66 234
APT56_RS14315 3202891 .. 3202923 + -10.6  -4.07568   ATGCCAGCCTTTTCC     CATGCGCCGCG-CCCG CAG CGGATCGCGGC-CATG     TTTTCGCCAACGCAG  79 495
APT56_RS14325 3203300 .. 3203354 + -18.5  -3.17763   TGGGCCGGCAGTAAT CCCCTGTCGGCCGCGCGCGATGCGGC GGGC GCCGCTTCGCGCGCGGGC-ATAGCAG TTGCTCGCGTCTGCC  93 27
APT56_RS14330 3204293 .. 3204306 +  -9.5  -3.15231   GCGCCGGCGACTAAG               GCGGC CGCC GCCGC                TTCCCTACTTCTACT  60 27
APT56_RS14345 3206367 .. 3206395 + -20.4  -3.14132   CGCGGTCCGCCGCAA        TTGGCGTGCCCG ATCGC CGGGCACGCCAA        TTGCTCCGGGCAAGC 100 422
APT56_RS14355 3206849 .. 3206863 +    -7  -3.59979   CGCTACGGCAAGTAA               CCGGCC GGC GGCGGG               TTTCCGGTCAGGGCG  59 26
APT56_RS14365 3209585 .. 3209619 +  -5.4  -4.19817   GCCGGGGCGACCGCC     GCCTTCGCCGCCCCGC AAT GCGTGGCGGGCATGGA     TTTTGCATGAGTACA  64 247
APT56_RS14370 3211190 .. 3211226 +  -9.2  -3.05844   GAGGGAGCGCAGGAG    CGGGCGTCAGCCCGCG CCGAT CACTTGCTGCCGCCCG    TGTTGGGATAGCCCG  60 85
APT56_RS14390 3216392 .. 3216418 + -10.1  -2.70932   ACGCCTGCGGCGGGC         GCGCGGTGC GCCAGTACA GCGCCGCGC         TGATTGCCAGCGCCA  56 272
APT56_RS14400 3218718 .. 3218737 +  -4.8  -2.59748   TCACCTTCTGTAAAC            CCGACGGC TACC GCCGCCTG             TAAATTGTCGCGCTA  43 98
APT56_RS14405 3220949 .. 3220966 +  -6.9  -3.15544   AGGCCGGGCGCGCAC             AGCGTCG AGGC CGACGCG              TTGATGGCGATCGGG  50 514
APT56_RS14415 3223124 .. 3223143 + -11.4  -2.89564   GTTCAGCGCATAAGG            CGCCGGAT CCAT GTCCGGCG             TCTCTCCCGTCACCA  64 111
APT56_RS14425 3225054 .. 3225084 +  -4.7    -4.855   CTGCTGGCGCGGCTG      CGG-CG-CGCGCC CTGATCC GGCGCGGCGTTCG      TTCTTTTTGTTTTTC  81 11
APT56_RS14430 3225833 .. 3225859 +  -8.6  -3.74693   TTGATCAGGCCGCCA         TCCGTCACCCGC GGA GCGGCTGGCCGA         TTTCCTGGCATCACG  67 161
APT56_RS14435 NONE
APT56_RS14440 3227807 .. 3227851 +  -5.5   -4.1299   ATCCGCCTGCCGCGC CCGGCGCGGTCCGCGTGTCG CGCCGC CGGCGCGTCG-CCTCTCCGG TTCCTTTTTTTTGGC  66 142
APT56_RS14445 3229664 .. 3229676 + -10.5  -2.70932   TGGGGCGGCCCTTCC                GGGCG GCC CGCCC                TCCTTCCCAGGGAGC  59 104
APT56_RS14450 3230791 .. 3230815 + -13.5  -5.03715   GCGACAACCTCCAAC          CACGTCCCGCT GCA GGCGGGACGCG          TTTTTTAGCGCTCCT 100 154
APT56_RS14455 3232032 .. 3232061 + -11.3  -3.43071   GGTGCCCGACGTGTA       GGC-GTGCCCCCGG ACG CCGGCGGCCCAGCC       TTGATTGATATACAC  72 358
APT56_RS14480 NONE
APT56_RS14485 3241405 .. 3241416 +  -3.6  -3.72893   GGCGCCATCGAGCTT                GGCG GCGA TGCC                 TTTGATCAGGCCATC  55 348
APT56_RS14495 3243087 .. 3243097 +  -4.6  -3.31144   GGTCGCAGATCGCCA                 GGGC CAC GTCC                 TTGTCGGCGTCGGCC  49 239
APT56_RS14510 3246137 .. 3246153 + -11.5  -2.82015   GTCGGCCAGCAGCGC              CGCGCGC GTG GTGCGCG              TATGGTCGGTATAGC  59 255
APT56_RS14520 NONE
APT56_RS14525 NONE
APT56_RS14530 3249649 .. 3249664 + -11.8  -3.57144   CGCATTACCTTTCTT              GGCGGC CTCG GCCGCC               TTTCCCGCTGAACCC  77 70
APT56_RS14535 3251064 .. 3251099 +    -6  -3.68529   CCAGGCCCGCCTGCG    GCGC-GACGTCGTGCAG GTG CAGCACCATGGCCGCGC    TTTCCGTCATCACCT  61 499
APT56_RS14550 3253245 .. 3253272 + -15.5  -4.66537   AGCGGCCGGCCCGAA        CGCCCCGCCGC CCTTGC GCGCCGGGGCG         TTTTCTCTTGCGCGC 100 59
APT56_RS14560 NONE
APT56_RS14565 NONE
APT56_RS14570 NONE
APT56_RS14575 3258368 .. 3258391 + -18.2  -3.53012   CACCGCGTATGCAAA          GATCGGCCGC CCGC GCGGCCGATC           TTTGCGGGCCCCGCA  93 248
APT56_RS14615 3267128 .. 3267150 + -14.9  -4.30978   CGGCTGTTTCACCAG           GCGGCGGTT AATCC AACCGCCGC           TTTTCGTACCTTGGG 100 213
APT56_RS14620 3268037 .. 3268049 +  -3.3  -3.41359   GTTCCGCTACGTCGA                CCGCA AAG TGCAG                TATTGATTTTCGAGG  47 7
APT56_RS14625 NONE
        ugpC 3270325 .. 3270335 +  -8.2  -3.29144   CGATGCTTTCCAGCC                 CCCC TTT GGGG                 TTGTAGCGGCGGTAG  59 288
APT56_RS14660 3276609 .. 3276631 + -11.9  -3.06696   TTTTGTGCCCCGCGC           GCCGCGGCC TCGCC GGCCGCCGC           TATCTTGGGCAGCCC  69 49
APT56_RS14730 NONE
APT56_RS14735 3297524 .. 3297537 +  -9.5  -2.52464   GCGCCACGTCGCGCA               GGCGC ACCC GCGCC                TGCGTTGCCAGCGGG  55 425
APT56_RS14745 NONE
APT56_RS14750 NONE
APT56_RS14755 3300994 .. 3301017 + -19.6  -4.72272   CCGCAGAAACAAAAA          GCCCCGTCGC AGAG GCGACGGGGC           TTTTTGCTGGAGCGG 100 81
APT56_RS14765 NONE
APT56_RS14770 NONE
APT56_RS14775 3305855 .. 3305880 + -10.3  -3.69354   GCGCGGCCCGCGCCG         CCGACGGCCGA TCAG TCGGCCGACAG          TTTCACCTTCTGCGA  74 111
APT56_RS14785 NONE
        prfH 3309471 .. 3309482 +  -2.2  -3.36273   ACCGATCGCCAGGTA                G-GCG GCG CGCTC                TTCGTGTTCCGCGGG  45 371
APT56_RS14805 3312065 .. 3312093 + -23.2  -3.14132   TGCGCGGCGGGACGT        CACGCGGGCGGC GCAAA GCCGCCCGCGTG        TTCCTGGCAGACGCG 100 51
APT56_RS14835 3320387 .. 3320403 + -13.7  -3.01712   CCGAGACCGCGCGCT              GCAGGCC CTG GGCCTGC              TGTTCCAGCGCGGCG  75 79
APT56_RS14840 3320929 .. 3320956 +  -3.2  -2.62735   GCGCTGAGCGCCTGG        CGGCTGGCCAGG TCGG CATTGCCGGCGG         TCATCTGCACCGTAT  39 68
APT56_RS14845 3321568 .. 3321580 + -10.5  -2.63631   TGGTCGAACAACGGC                GCGCC CTC GGCGC                TGGTGTCGGGATTGG  58 197
APT56_RS14850 3322040 .. 3322050 +  -2.4  -3.18033   ATGCGCTTTTGCGAA                 CAGG AAC CCGG                 TATTAATGAATTGTG  44 81
APT56_RS14855 NONE
APT56_RS14860 3324711 .. 3324741 + -17.7  -3.81488   CCGGCAAACCAAAAA      CGGGATCAC-GCCG CGCT CGGCCGTGATCCCG       TTCTGTTTGGCGCGC  93 65
APT56_RS14870 3326715 .. 3326734 + -16.4  -4.46212   GGCCGGATGCAAGAA            GGCCGCGG AGTT CCGCGGCC             TTTTCTCATCGCGCG 100 82
APT56_RS14885 3330616 .. 3330647 +  -7.8  -4.18018   TGTCTTTTGCTTCTT      CCCACGCGGGGACG CGTT CGTCCCTGCGCGCC       TTTTCCCTGAGCCCA  71 100
APT56_RS14890 3332670 .. 3332680 +  -6.8  -3.85698   GCCGTGATGGTCGGC                 CTGC GCG GCAG                 TTTCTAAGCCCCACG  64 8
APT56_RS14895 3333536 .. 3333557 + -10.9  -2.57132   CAGCGCGCGCTTGCA           GCCTC-CCCT CCG AGGGCGAGGC           CTTGTCGCGAAGCCG  62 69
APT56_RS14910 NONE
APT56_RS14915 3338996 .. 3339045 +    -7    -3.889   GTCCAGGTGGCGGCA TGGCGCGGCGCGACAATGCGG CGGGGTTTT CCCCCT-GCCGCGCCGCGCGA TTTGCTATCCTTCGG  64 120
APT56_RS14920 3339726 .. 3339737 +    -3  -2.64472   GCGGCACACTGAAAC                GAAT CCGC ATTC                 TCCCTTTCCACCATC  39 29
APT56_RS14925 NONE
APT56_RS14930 3342321 .. 3342338 +  -6.9  -2.87132   CGAAGCGCTGCGCGC             TTCCCCC TCAA GGGGGCA              TGTCTACGGACCGGC  49 58
APT56_RS14950 3345972 .. 3346022 +  -7.4  -3.53012   GGGCTCGGGCGCCGA TGACGGGCGGCGGCGGCGCTTAGG CCGCC CCGTAGC-CC-CCGCCTCCCGGCG TTTCCACCACGAACA  60 43
APT56_RS14970 NONE
APT56_RS14975 NONE
APT56_RS14980 3354262 .. 3354280 + -14.6  -5.75342   CCGGCCAATCCGAAA             CCCCGTTC CTG GAACGGGG             TTTTTTTTGGAACAA 100 47
APT56_RS14985 3355690 .. 3355711 + -17.3  -4.72272   GCCGCATAGCACAAA           GCCCGTCGC TCGC GCGACGGGC            TTTTTCCTGGGCCAC 100 69
APT56_RS15055 3370181 .. 3370220 +  -9.1  -3.53091   CGGGCTCCCGTACAA  TGCCGGGCGTCTCCCGC CTGCGC GCGGCACCCTCCCGGCA   TTTCCAGAACGAGGT  65 82
APT56_RS15060 3371694 .. 3371707 +  -3.7  -4.26076   CCGCGCACACCTCCA               GCAGC TTAC GCCGC                TTTTCCTCGCCGTCG  67 283
APT56_RS15075 NONE
APT56_RS15080 NONE
APT56_RS15085 3377152 .. 3377169 + -12.7  -4.55128   TGCGCCAAGCAAAAA             CGCCACC TTCG GGTGGCG              TTTTCGTTTCAGGCT 100 58
APT56_RS15095 3378976 .. 3378991 +  -6.8   -4.1673   CCTGATCGGCCGCCA              GCGCGGC TTC GCCG-GC              TTTCTTGGCGGCTTC  69 446
APT56_RS15105 NONE
APT56_RS15110 3383312 .. 3383340 +  -5.7  -3.07962   CGAACTGGCCGCCAT        CCGGCCGGCCGCC TGA GGCCCCCGCCCCG        TGTTCAGCTATCGCC  49 10
APT56_RS15115 3384253 .. 3384274 + -17.3  -4.18018   CTGGAACGAAAAAAA           GGGCTGCCC CTCG GGGCAGCCC            TTTTGCCTGGCAACG 100 48
APT56_RS15135 NONE
APT56_RS15140 3389901 .. 3389922 + -15.9  -3.61398   CCCAGTAAGACAAAA           GGGCAAGCC AACC GGCTTGCCC            TTCTTGCAGGCGGCC  90 33
APT56_RS15180 3397604 .. 3397619 + -11.8  -4.93968   CCCGGAATAACAAAA              GGGGGC CGAG GCCCCC               TTTTTCATTGTCCGT 100 66
APT56_RS15190 3400094 .. 3400123 + -20.1  -5.26875   GGCATGCATGCAAAA       CCGCCGCGCTTCCG GTC CGGAAG-GCGGCGG       TTTTTTCATTGCCGG 100 50
APT56_RS15200 3401934 .. 3401944 +  -2.4  -2.85999   ACCATTGCGACCCGG                 CCGG TCC CCGC                 TCTACTATGGACTGG  40 101
APT56_RS15205 3402426 .. 3402455 + -14.3  -4.17425   AGCCAGGACGCGTGA       TGGACAAGGGCCC TGCG GGGCCCTTGTGCG        TTTTACGCTAGTTGT  93 26
APT56_RS15295 3420917 .. 3420959 + -13.3  -4.18018   GCGGTTCGAGGCCGG C-CGGCGCGACCGCCCTGCC GCAT GGCCGGGCGGTCTTGCCACG TTTTCCGTCCGCGCG  89 436
APT56_RS15300 3422371 .. 3422387 +  -7.9  -4.09685   GCATCACGTCCGTCG              GCGCCTG GCG CACGCGC              TTTTGCAGGATGGCG  69 491
APT56_RS15325 3429274 .. 3429307 +  -5.9   -3.5393   CTGTACCTGCCCGTC     GACCGGTAGCAATTC CCGC GTCTTGTTACCGGAC      TTTGCGCCGCCTGCT  55 17
APT56_RS15330 NONE
APT56_RS15335 NONE
APT56_RS15340 NONE
APT56_RS15345 NONE
APT56_RS15350 3432461 .. 3432510 +  -7.5  -3.02144   GCGGCTGGCGATGCT GCTGGGCCGCGGCCCGGTCTGGC TGAC GCCCGATTCGCCCGCGGCGGCGC TGTTCACGCCGGTGA  54 82
APT56_RS15365 3436597 .. 3436630 + -13.1  -2.73875   CGGCTCGGCCCGGCG     CTGCGACGGATGCGCT TGC GGCGCG-CCGTCGCCG     TCGTGTTGGAAGAAG  63 440
APT56_RS15380 3439165 .. 3439180 +  -4.6  -3.14564   CGCGTTGAGCGGGTC              GGCGAT GACC AGCGCC               TTGATGCGCGCATCC  47 402
APT56_RS15390 3441344 .. 3441375 + -20.2  -5.40072   TGGGTGGTTTGTCGC      CGCGCGTTTCCGGG TCCG TCCGGGAACGCGCG       TTTTTTTGCGCGGCG 100 104
APT56_RS15400 3443960 .. 3443979 + -10.6  -3.44622   ATTTCGGCCTGACTC            CGGCGCCG TTAT CGGCGCAG             TTCGTTCTGGCGCTG  69 376
APT56_RS15445 NONE
APT56_RS15450 3453283 .. 3453305 + -18.4  -3.32844   CGTCCCCACCCGCAA           CGCCGCGCCG GCA TGGCGCGGCG           TTGTCGCATGGGGCC  93 127
APT56_RS15470 NONE
APT56_RS15475 NONE
APT56_RS15480 NONE
APT56_RS15485 NONE
APT56_RS15490 NONE
APT56_RS15495 NONE
APT56_RS15500 NONE
APT56_RS15505 NONE
APT56_RS15510 3465501 .. 3465537 +  -5.2  -3.09516   GGCGAGAGCGTCCTG   GCGT-TCGCCTAGCGC GATCCCG GCGCGAG-CGATACGC   TTGGATCGTCCACGC  47 14
APT56_RS15515 3466245 .. 3466303 +  -8.8  -3.28712   ACATCGCCAGGTAGC CCAGGC-GCACGCCCAGCCAGCAGGCCAT CAAC GTGGCCA-CGTGCTGGG-GCGCCGCCTGG TTGTACAGCGCGAAC  59 198
APT56_RS15525 3467705 .. 3467715 +  -8.2  -2.52464   GTTCACCTACCCGAT                 GCGC GCC GCGC                 TGCATTGAAACGCCC  52 7
APT56_RS15545 3470955 .. 3470969 +  -4.2  -2.78679   GCAGACCCATAAATA               CATAGG CAT CCCATG               ATTTCCGTGACCCGC  43 10
APT56_RS15550 3471445 .. 3471499 +  -8.4  -4.07568   TGGCCGCCCCGCGAG CCGGCGCGACAGCAGGCGCTTGCCGC CTGGC GCGACCA-CGCATGCCG-CTCGCCGG TTTTCCCGGCAGGCA  72 60
APT56_RS15555 NONE
APT56_RS15560 NONE
APT56_RS15565 NONE
APT56_RS15570 3475360 .. 3475385 + -11.2  -2.71791   GCAGACCCGGACCGA         CGCGCGC-CAA CCCTC TTGAGCGCGCG         CTTTCACCCACCCGT  62 7
APT56_RS15575 3476873 .. 3476898 +  -3.1  -3.96216   GCGGCAGGCGATACC         CGGGCGGCCAGG CTG CC-GCCCACCTG         TTGTTTCCCTCCGGC  58 43
APT56_RS15580 NONE
APT56_RS15585 NONE
APT56_RS15590 NONE
APT56_RS15595 3481799 .. 3481827 +  -8.8  -3.14132   TCGGCGCCCAGTTCC       GTGGCGGC-GCGT TGCA GCGCCGCCACCAC        TTCCTGCAGCCGCGC  56 187
APT56_RS15610 3485315 .. 3485326 +  -7.2  -3.18024   CGCGAACCCCACCAG                GCCG CGAT CGGC                 GTTTTCGTAGTAGCC  53 267
APT56_RS15620 NONE
APT56_RS15625 NONE
APT56_RS15630 3492163 .. 3492190 +  -4.6  -3.46586   CCGCGCCACCCGCCG        GCCCCCGCGCCG GCCG CGCCGTGGAGAC         GTTTTCTATTTCAGG  53 257
APT56_RS15635 3492661 .. 3492674 +  -9.5  -3.35996   GCTTCTTCCAGACGA               CGCGG CGGC CCGCG                TTGTCCATGGACATC  64 93
APT56_RS15640 3494430 .. 3494456 +  -6.5  -3.06315   CCGCTGGTGAAACGG        CC-GCGCAGGCA CAGG TGCTGGCGCAGG         TCTTGCGGATGTTGC  48 507
APT56_RS15650 NONE
APT56_RS15655 3496750 .. 3496761 +    -3  -2.76189   GTTGCAAACAAACAA                TAAG TAGG CTTA                 TACTTGCCTCACTTA  40 62
APT56_RS15660 NONE
APT56_RS15665 3499537 .. 3499553 +  -4.3  -3.24425   GAAAGCCCGTTCATT              GAGAGGC CGC GCCTTGC              TTAATAGGTTATATA  47 97
APT56_RS15670 3500395 .. 3500424 +  -8.4  -2.62184   TGCTACGGCGGTTGA       TGGCAGGGCGGT TGTAAC GCCGCCCCGCCC        TACTCTCCGCCGGCC  53 26
APT56_RS15715 3511120 .. 3511132 +  -7.7  -3.36492   GCAGGCTATTACCGC                CATCG TAT CGATG                TTGTGGAGTTGCGCC  58 151
APT56_RS15735 3519117 .. 3519132 + -10.4  -3.05384   GAGCCCTGTCTCGCG              GGCAGG CTCC CCTGCC               TTGGATCACGCCCGC  63 39
APT56_RS15765 3524013 .. 3524024 +  -3.6  -4.15044   ATCGGCGCCGGGTCC                GGCG GTAG CGTC                 TTTGTTGGCCCGAAA  60 18
APT56_RS15775 3526960 .. 3526975 +  -3.2  -4.12188   GCCGTGTTGTCCCTG              CTGGAC GCAG GTCTGG               TTTTAAAGATGGTCG  60 308
APT56_RS15845 NONE
APT56_RS15850 3542797 .. 3542818 +  -7.9  -4.39407   CCGGCCGGCCACTGA           GGCGTCGCG GCCG CGCCACGTC            TTTTGAATTCTTTAC  78 26
APT56_RS15855 3544356 .. 3544381 +  -4.6  -3.04144   TTCGTCTTCCAGCCG         CGCCGGGT-CG GTCAG CGTGCGCGGCG         TGTTGCGCGTCAGCG  46 311
APT56_RS15865 NONE
APT56_RS15870 3548519 .. 3548541 + -10.5  -3.02144   CGCTGTGCTCGACCA           GCCGCTGCG CGATC CGCAGCGAC           TCTTCCCGGAACTCG  59 338
APT56_RS15885 3551764 .. 3551774 +  -8.2  -3.06261   TGATGAAGTCGGCCA                 GCGC CTC GCGC                 TCTTCGGCGTTGGGC  55 136
APT56_RS15895 3552946 .. 3552958 +  -6.9   -3.1875   TTGACACAACTATTG                CGTCG CGG CGGCG                TTACATTACGGTATC  54 65
APT56_RS15900 3553598 .. 3553620 + -20.6  -3.17075   TGCCGCCCGCCACGA           CGAGCGCCCC CCA GGGGCGCTCG           TTGCATTGGCGCGGC 100 69
APT56_RS15920 3556176 .. 3556211 + -18.2  -3.53224   AGGGGGCCGCCCCCG    CGTCCGGCGCGCCGGC GGGG GCCGGGGCGTCGAACG     TTTGCGGCGGCGATC  90 380
APT56_RS15930 3558299 .. 3558313 +  -2.7  -3.57309   GCGCCGGTTCAAGCC               GGCGC TTACC GCCCC               TTTCGCCCCGTTTTC  50 181
APT56_RS15935 NONE
APT56_RS15940 3560496 .. 3560508 +  -3.4  -2.66216   CCACCAGGAACCGTC                CATG CCGTA CATG                CTTCTCATCGTCGAG  40 222
APT56_RS15945 NONE
APT56_RS15950 NONE
APT56_RS15955 NONE
APT56_RS15960 3563214 .. 3563234 +  -6.7  -3.07113   CCCCCACGCCGCCGG            ACACGCCGG CCC CCGACGTGC            TTAAATCCCGTCATG  51 90
APT56_RS15965 3564247 .. 3564259 +  -3.3  -3.19602   GCCCTGTCTATCAAA                TACCC GTT GGGAA                TCTTCATGTGGGCAG  45 136
APT56_RS15970 NONE
APT56_RS15975 3565970 .. 3566008 +  -8.8  -2.78384   TGTAGCCCACCGCGC  GCATGCGC-GCG-GCGCG GGCGG CGCGCACGCCGGGCACGC  TGTCCTCGACCACCA  52 210
APT56_RS15990 3568958 .. 3569003 +   -11   -2.8474   GGCCCGCCCGCCTCA GGCGCGCGGCGGC-TGCGCGT AGCTC ACGCCCATGCCGGCGCGCACG TCGTTCTGGATGCCG  64 158
APT56_RS16010 3572282 .. 3572305 +   -11  -3.77219   AAAGCGGCGCAGGCG          CTC-GGACGGC AGC GCCGTCCAGGG          TTTCAGTTGCGTGAT  74 362
APT56_RS16025 NONE
APT56_RS16030 3574832 .. 3574845 +  -5.2  -3.57462   TCGCGCACGAGCGAT               GCGC CGGCCA GCGC                TTTGCGGGTACCCTA  55 105
APT56_RS16035 NONE
APT56_RS16045 3578228 .. 3578252 +  -5.7  -3.17051   CAGGTAATGGCCCAG         CTTGC-CCGC CCGCAC GCGGCGCAGG          TCTTCCTCGTAGCGG  50 107
APT56_RS16055 NONE
APT56_RS16060 3581554 .. 3581603 + -22.2  -3.53091   CGGCGGGCGTTCCTG TTTGCGGCGCGGGTCGTCCGCCGC CGGA GCCGCGG-CG-CCCGCGCCGCGAG TTTCCCGCGCCCCCT 100 114
APT56_RS16065 3582616 .. 3582634 +    -3  -2.95774   CTTCGCGCCAGCTAA             CCGGGACA CTA TGTCCAAG             TATCTGATCAATATC  42 26
APT56_RS16070 NONE
APT56_RS16075 NONE
APT56_RS16080 3587744 .. 3587754 +  -8.2  -3.95584   GTAGCGGTAGGCACG                 GCCG GTG CGGC                 TTTCGTTGATGCGCG  70 473
APT56_RS16150 3606295 .. 3606310 + -10.4  -2.52464   AATGCCCGAACTGAA              TCCGGC GCGA GCCGGA               TGCGTTCACCGAAAC  58 27
APT56_RS16155 NONE
APT56_RS16160 3608889 .. 3608944 +  -8.9  -3.36273   ACGGCGGGCTGGCGC GCTACCGC-CTGCACGCCGCGCCCTGG CTGG CCACGCTGCGGC-TGCGGCGCGACAGC TTCGTGTTCCAGGAC  60 367
APT56_RS16165 3613772 .. 3613786 +  -2.7  -3.28712   AAAGTGGACATGTCC               CGTGG CTGGT CCTCG               TTCTGACGGCCGGCG  44 5
APT56_RS16170 3614418 .. 3614447 +  -2.8  -3.04144   GCGGCGCCCTAGGCC      TGGCGCGG-CGCTG CCCA CGCCGACCG-GCCA       TGTTCCCGCTCGAAA  42 29
APT56_RS16175 3614888 .. 3614908 +  -6.8  -3.55563   TCAACCATTCTTGTC           GCCCGGCGG CGTG CC-CTGGGC            TTTCAAGCGTGCGAT  57 140
APT56_RS16210 3624556 .. 3624600 +  -2.3  -2.66272   GTCATGCGACGCGAC GC-GGG-GGCCGCGC-A-ATGAT CCG ATCATCTCGCGCGACTACCCTGC TCCCTTTGCCTGCCC  38 8
APT56_RS16215 3626142 .. 3626168 +  -9.4  -2.80779   GCAACCCGCGCCTGT         TCATGGCGATCG GCC TGATCGCCCTGG         TCGTGTTCCTGTTCC  58 141
APT56_RS16220 NONE
APT56_RS16225 NONE
APT56_RS16230 3631714 .. 3631753 +  -8.5  -4.12599   GCGGCGCCCTCTTTT TCAAGCC-GG-CGCCGGCC ACGC GGCCGGCGCCCCGGGTGGG  TTTTCAGCCGTTGTT  72 106
APT56_RS16240 3633269 .. 3633284 +    -6  -2.98823   GGGCACCCCGCGCAT              GGCGCC GGAC GGCACC               TATCTGTAAGCAGAC  48 1
APT56_RS16245 3633998 .. 3634023 + -11.1  -3.01712   CGAGCAGGTGGCCAA         GAGCCT-GGGCG TGG CGCCCAAGGCGC         TGTTGCAGGGCCGCG  65 448
APT56_RS16250 NONE
APT56_RS16255 3635732 .. 3635763 + -10.9  -3.53012   ACGGAGTGCGCTGCC     CG-CG-GGGCCCGGT CATG ATCGGGCCCTCGTCG      TTTCCGCGGCCGCGC  72 66
APT56_RS16260 3637025 .. 3637066 + -19.4  -3.05022   TTGAACCGCGCCGTG CCGCGCC-GGCGGGGCCGT CTGTT GCGGTCCCGCCGGGCGCGA TCTGTATCTGGCGGC  93 37
APT56_RS16265 3637860 .. 3637888 +  -7.4  -2.96274   GATCATGCGGCCACC       GCCAC-CGCCCAG CGGC TTGGGCGTGTCGC        TGTAATTGTCGGCGC  50 75
         eno 3642348 .. 3642371 + -13.8  -4.07568   GTTCAAGACAGGACG          GCCGCCAACG CCGA CGATGGCGGC           TTTTGCCGAGGAACC  93 64
APT56_RS16290 NONE
APT56_RS16315 NONE
APT56_RS16320 NONE
APT56_RS16325 NONE
APT56_RS16330 NONE
APT56_RS16335 NONE
APT56_RS16340 3655953 .. 3655982 + -18.5   -4.8622   AGGCTTCGTCCTGGA       CGGGCCGGTCGCC TCGC GGCGGCCGGCCGG        TTTTTCATTGGAACG 100 51
APT56_RS16350 3657981 .. 3657993 +  -6.2  -3.57144   TGAGCTGACGCGGGG                CCGC GCGGG GCGG                TTTGACCCTGCGCAA  57 33
APT56_RS16355 3658935 .. 3658953 +  -5.9  -2.52464   ACCAGTTGACGATGG             CGCGCCA GATCG TTGCGCG             TGACTTCGGGCAACG  44 407
APT56_RS16365 3661296 .. 3661306 +  -5.4  -2.53876   TGAGATAGATCATCG                 TACC CAG GGTA                 TGGCTTCGGATAGGC  43 127
APT56_RS16370 3661898 .. 3661918 +  -8.2  -3.28712   GCCGGCATAGGGAAA            GCCGGCAT AGGGA AAGCCGGC            TTATGGACAACCGGC  59 132
APT56_RS16395 NONE
APT56_RS16400 NONE
APT56_RS16405 NONE
APT56_RS16410 NONE
APT56_RS16415 NONE
APT56_RS16420 3675600 .. 3675645 + -13.2  -3.14132   CTTCTCGTGCGGATT GCCGGCCAGC-CACTGCGCCAC GCGG GTGGCGCTGCGCGC-GGCCTGC TTCATGCGCAGCACC  72 402
APT56_RS16430 NONE
APT56_RS16435 NONE
APT56_RS16440 NONE
APT56_RS16445 NONE
APT56_RS16450 3682026 .. 3682069 +  -9.4  -3.56325   CCGGGATCGGCACGG CGGTGGCGGTTCCGATGCTGA CCG TCAGCCACGGC-CCGCCGCCA TTGTCCTTCTGCGGA  63 209
APT56_RS16505 NONE
APT56_RS16510 3696651 .. 3696669 +  -4.5  -3.44274   CTGCGCCTCGCCGTA            GCGCCGCT CCAT GGCG-CGC             TTGATGTTCTCGTTG  52 251
APT56_RS16530 3701870 .. 3701880 +  -6.8  -2.52516   TTGCGAGTAAGGTAT                 GCCT CAG AGGC                 CTTCATCGTCCGGCA  47 57
APT56_RS16535 3702318 .. 3702352 +  -4.8  -3.59262   CCGCGCCGCGTCAGC     GTCACGACCCAGGGCG GAC CGTCCTGGTAGGTCAC     TTTCAGGCTGTCGCC  54 171
APT56_RS16560 3707895 .. 3707926 +  -2.9  -3.19522   GCAGATCCGTCAGAC     GCGCGCTGA-CG-GC CGAT GCTCGCTCCCCGCGC      TTCAATCTTCCCTGC  45 49
APT56_RS16570 3710761 .. 3710800 +  -9.8  -2.70932   CTCGGCCACCATTGC  CGCCCGCCCTGCCGCGCGG GCA TTGC-CGGCCAGGCGCGCG  TCCTTGCCGAACGCG  56 390
APT56_RS16580 3712472 .. 3712487 +  -3.2  -2.72511   GATGGCTTGCGGCAA              GGCG CCCGCTCC CGCC               GTTTCCAGCAGTACG  40 187
APT56_RS16590 3714981 .. 3715020 +  -4.8  -2.78384   GGATAGCGGCGGTAG  CCGTTGGGCTGGCGCG CCACCGTC CGCAGCAGCCCGGCGC   TCTCGTAGAAGCGGA  43 329
APT56_RS16620 3718005 .. 3718021 +  -9.3  -3.16117   CGCGGAGCGGCGGAC              GGCGGGC TGA GCGCGCC              TATTCGCTTGCCTAT  60 16
APT56_RS16635 3720834 .. 3720875 + -18.8  -3.18264   CGAGTCCAGCGCAAC CGG-GCTCATGCGCGCCGG GCCCG CCGATGCGCATGAGCGCCG TTCATCGCTCAAGAA  93 290
APT56_RS16650 3724186 .. 3724201 +    -6  -3.59979   GCGGGCGGTGTCATA              GGCGGC ATTG GCCGAC               TTTGCCATGCGGCCG  57 332
APT56_RS16675 3728911 .. 3728924 +  -3.8  -2.78596   TCGGGCATTGACATA               TCGG GAAATA CCGA                TATCATCACGCCATG  42 47
APT56_RS16680 3729285 .. 3729305 +  -6.7  -3.70469   CCCCTGCAGGGTTGC            GCGAGCGGC CCT GCTGTCCGC            TTTGCGCTTGTGCTT  62 71
APT56_RS16685 3730926 .. 3730952 +  -4.2  -3.33696   GACCGCGGCCTGCAC         GATCTGCCCCCG GTC CGCGGGCACGCC         TTCCTTCAGACCGGC  47 511
APT56_RS16695 3732682 .. 3732695 +  -9.5  -4.74504   CGAACATTGAAAAAA               GGCGC CAAG GCGCC                TTTTTCAATTACCGT  91 93
APT56_RS16700 NONE
APT56_RS16705 3734173 .. 3734187 +  -6.4  -3.86015   CGACGGACCTTCCAC               GCCTTT CGG AAGGGC               TTTATGACGCCCCTC  64 52
APT56_RS16725 3739064 .. 3739100 + -13.8  -3.17219   AGCAGGCCTGAGCGG   CAGGCCGC--GTATCGCG GCG CGCGATCCCAGCGGCCTG   TTCCTGCGCCTTATC  76 30
APT56_RS16730 3739708 .. 3739729 + -14.4  -3.07994   CGGCCTGACAGCGGC           GGCGCGCG CTTGGT CGCGCGCC            TTGCCTCGCGTTGCC  76 33
APT56_RS16735 NONE
APT56_RS16740 3742033 .. 3742048 +    -6  -3.44051   CACCTGCCGCAGGAA              CGCGGC CAGC GCCGGG               TTGTCGTGCTGCGCA  55 110
APT56_RS16750 3744108 .. 3744120 +  -3.3  -5.60993   CCGAGGGCGCGGCAT                TGCGC ACC GCCCA                TTTTTTTGTCCCCAG 100 82
APT56_RS16755 3745404 .. 3745421 + -12.7  -6.02914   GTTGTTGTAATTTTT             TCCGGCC TTCG GGCCGGA              TTTTTTTTCTCTGCG 100 228
APT56_RS16765 NONE
APT56_RS16770 3746614 .. 3746629 +    -6  -4.10161   GATGCGCGCAGGACC              GGCCAG GGAA CAGGCC               TTTTCGGAACTGGTC  66 90
APT56_RS16775 3747213 .. 3747226 +  -2.4  -3.52204   CCAGCGTCTGCACCT               CGAA GTGGCG TTCG                TTCATTTCGCGGTCG  47 221
APT56_RS16785 NONE
APT56_RS16790 NONE
APT56_RS16795 3752130 .. 3752145 +  -7.5  -3.53012   ATAATCCCCCCGCCC              GCCGG CCTGGC CCGGC               TTTGAAAAGACACCG  60 90
APT56_RS16800 3752895 .. 3752926 +  -2.9  -3.75738   AGGCGAAGCCTTTGC      CGAGCATGCACTG CTCACC CCGTGCATAGTCG       TTGTTGGTGATGGTC  53 430
APT56_RS16810 3754518 .. 3754557 + -13.1  -4.14764   CGCGAAGTCATGACA  GGGCATAAGGAAA-TCCC GATTA GGGAATTTGCTTATGCCC  TTTAATTATTTGCCG  89 133
APT56_RS16815 NONE
APT56_RS16820 NONE
APT56_RS16825 NONE
APT56_RS16830 NONE
APT56_RS16835 3760119 .. 3760151 +  -2.5  -3.53012   CGCGGCAGCGCCACC      CCGCTCATCGACCTG CGC CAGGTCAGCAAGCGC      TTTGGCGAACGCCCC  47 160
APT56_RS16840 3761111 .. 3761152 +  -5.5  -4.33105   GAACGACATGGCCTG ACGCTCGCGGGCCGCGGCG TCCA CGCCGCGACCCATGGACCC  TTTTACTGCTCGTTC  73 25
APT56_RS16845 NONE
APT56_RS16850 3764592 .. 3764616 +  -2.8  -3.29471   CTCCACGCCCGCGGT         CGTCACGCTGT CGCA ACTG-GTGGCG          TTCCTGTCGTACCAG  45 487
APT56_RS16855 3765358 .. 3765383 + -20.5  -2.91695   GCCACGCAGTACCTG         GACAGGCCGCG TTTT CGCGGCCTGTC          TGCTTTGCGGCTCGC 100 59
APT56_RS16865 NONE
APT56_RS16870 NONE
APT56_RS16875 NONE
APT56_RS16880 3770323 .. 3770369 +  -7.9  -3.34043   GTACAGCGTGTGAGT TGGCGGCTAAACGGAGAGAGC CGTCT GCTATCACCCTTCAGCCGTCG TTGTCGCCTCGTGAA  58 28
APT56_RS16885 3771387 .. 3771411 + -18.6  -3.17194   CTTTCCGCCTTCCAC          TGCGCCCCGC CCCAC GCGGGGCGCA          TTGCCTTACCCCCAT  89 123
APT56_RS16890 3772285 .. 3772300 + -10.4  -5.82316   TTGAGAAATGAAAAA              GGACCC TGTG GGGTCC               TTTTTTTTGGGTGCT 100 37
APT56_RS16895 3772910 .. 3772926 +  -5.8  -2.54896   CGACGTCCTGAACAC              GACGGC CGGAA GTCGTC              TGGATTCAATCCCCA  45 148
APT56_RS16905 3775594 .. 3775612 +  -2.4  -4.25256   CAGTGAACGTCACAC             CTCAAAGT ATC ATTTTGTG             TTATTTTCATACAAA  63 175
APT56_RS16910 3778947 .. 3778984 + -24.3  -4.97957   ACGACGTCACCCAAA   CAGGACGGCAATCCAGC ATGA GCCGGATTGCCGTCCTG    TTTTATTGTTCTATC 100 133
APT56_RS16915 3779991 .. 3780017 +  -9.3  -3.17723   CTATCCGGAGAAGAA         CGAGGGTGAGC CATGC GCACACCCACG         TTCGGTTCAGACTGC  62 71
APT56_RS16925 3783594 .. 3783605 +  -5.8    -4.183   CAGTTTGAATTCATC                CTCG ATTC CGAG                 TTTCTTCAGAATTGC  66 235
APT56_RS16945 3788450 .. 3788466 +  -2.1  -4.09685   GACAAAATAATTTCG              ATGCGGC ACC GGCGCAC              TTTTCCAACCTGACG  58 349
APT56_RS16950 3788843 .. 3788861 +    -3  -2.88249   ACGCGGCGTTCGTGC             TGGATCCC GAT GGGAACAA             TATCTAGGCGGTCTG  41 0
APT56_RS16985 NONE
APT56_RS16990 3796583 .. 3796596 +  -3.7  -3.29144   TGTTGATATTCAACT               GCGCC GACA GGCTC                TTATCGAACCGGTAG  47 243
APT56_RS17015 NONE
APT56_RS17020 NONE
APT56_RS17025 NONE
APT56_RS17030 NONE
APT56_RS17035 3811265 .. 3811305 +  -6.8  -4.14511   GGGCGAGGTGATCCG GCGCGGCAAGC-TGGGGCTG GAA TAGTCCCATGCCGGCC-CGC TTTTGCCGTACCCTT  68 1
APT56_RS17040 3812302 .. 3812327 + -11.7  -3.05463   GCGAAGGCGTGTGGC         ACGCCAGCCCC TGAC GGGGCCGGCGC          TTCAATCGAAGCCGT  66 12
APT56_RS17075 3817979 .. 3817993 +    -5  -3.53091   CCCACACACTAGAAT               TGAGGA TAA TTCTCA               TTTCCAACACACCAT  53 148
APT56_RS17080 NONE
APT56_RS17085 3819623 .. 3819645 +  -3.3  -5.14563   GTTTTTCGTTCTCGC           GTGGCAATC CCTAT GAAAGCCAC           TTTTTTCATGGGAAC  86 58
APT56_RS17090 NONE
APT56_RS17110 3827827 .. 3827849 +  -6.9  -3.14344   CCCGATCCCAAAGCC          GCGCCGC-CG GCCG CGTGCCGCGC           TTCCTGCGCGCGCTG  51 250
APT56_RS17115 3829024 .. 3829062 +  -8.9  -3.36273   ACCAGGGCGACCACG  CCGCG--CTGCGCCAGC GAGACCG GCTCGCGCAGGTCGCGG  TTGCTGTTGCCGGCG  59 375
APT56_RS17125 3830077 .. 3830105 +  -8.1  -3.79481   TCCCCGTTAGCGGCC       GCGCCGCGTGGA CCTCCA TCCCCGCG-CGC        TTTCCCTTCCCTTTC  65 129
APT56_RS17130 3830929 .. 3830950 +  -5.7  -3.02461   CTGCCCGATCGCCCG           CGCCAGCGC CTCG GCGCTGCCC            TCTTCGAGGCAGTTG  48 145
APT56_RS17140 3832679 .. 3832704 + -11.1  -3.85698   CGATTCCCTGTGGGC         GG-CGCCGGGCG CGG CGCCTGGCGATC         TTTATACCCAAGCCG  79 491
APT56_RS17150 3834235 .. 3834248 +  -9.5   -4.8622   GCGATTCCTTCAAAC               GGCGC CACG GCGCC                TTTTTGCTTCCCAGG 100 64
APT56_RS17155 3835103 .. 3835130 +   -14  -3.53811   CCGACGCTCCGCCCT        GGCGCCGCCCCC GGCC GGCGTCGGCGCC         TTTCGCCCGCGTCGC  81 62
APT56_RS17160 3836744 .. 3836771 +  -5.4  -2.70932   GCCACGCTGCGCCCG        CGCG-CGGTCCCG GCC CTGGCCTGACGCG        TCCTTGCCCGGGCCG  44 2
APT56_RS17165 NONE
APT56_RS17170 3839301 .. 3839337 +  -3.6  -3.96216   GCCCCCTGGCAGTTG    TACGCAATGGCGCG ATAGACAGC CGCCCCCTTGCGGA    TTATTTGACTGCACG  58 49
APT56_RS17180 3840839 .. 3840875 +  -4.1  -3.57144   GGCTGGGGTAGGACG    CGGCGCCGGCTCACGCC ACC GGCATGCGCTCGCACAG    TTTGCCGATGGCCGC  53 30
APT56_RS17195 NONE
APT56_RS17200 NONE
APT56_RS17205 3861953 .. 3861994 + -23.7  -3.18681   ACGCGCCGGCCCGCG CCCCCACGGCCCC-GCCGGC CTC GCCGGCCGGGGCCGTGTGCG TTACTGGCCTTGCCC 100 68
APT56_RS17225 3865810 .. 3865842 +  -3.2   -3.1355   ACGCTGTGACGGCGG     CGGCCGGGGC-GCCG TTGA CGGCCGCACTCGCCA      TTCGCTATCCGTCCG  43 32
APT56_RS17230 3866321 .. 3866337 + -15.1  -4.49556   GACGCCATGAAAAAA              GCCCGGC CAG GCCGGGC              TTTCTTTCCTGCGCC 100 31
APT56_RS17245 NONE
APT56_RS17250 3871009 .. 3871023 +  -9.2  -3.33815   CAGGCGGCCGAGCAG               GCGCGG TCC CTGCGC               TTACTTGAACCGCGT  64 84
APT56_RS17270 3875310 .. 3875324 +  -7.8  -3.28712   ATGTTCGGCAGCGTC               GGCGTG GTC TACGCC               TTCTGAGCGGCCCCG  57 5
APT56_RS17275 3876279 .. 3876297 + -10.2  -3.53012   ACCGCCACCGCGTCA             CGCAGGCG TTG CGCCTGGG             TTTCCAGCGACGCCG  65 215
APT56_RS17290 3882970 .. 3882996 +  -5.8  -3.06315   CTGCCCAAGGCCGAC        GGAGGCCAGGC ATGATC GCC-GGCATCC         TGTTCGCGGTCTTCA  49 11
APT56_RS17295 NONE
APT56_RS17300 3885479 .. 3885515 +   -15  -4.11751   CAGATCCCGCCCACC    AAAGACGGGCGCCGGC CACAA GCCGGCGCCCGTCGCC    TTTTGGAGAGTTCGT  95 120
APT56_RS17325 3889595 .. 3889616 +  -2.8  -3.36492   CATTAAATTGGATTC           CACGCGCC GGTCCG GGCGAGAG            TTATGCGCTTCGAGC  47 81
APT56_RS17330 3891281 .. 3891303 +  -5.5  -3.15861   AGCTCGGCCTCGCTC          TGGCAGGCCG GGCC CGGCA-GCCA           TTCCTCCGGCTGGTA  47 456
APT56_RS17340 3893626 .. 3893641 +  -4.6  -3.64703   GATGGCGGCATTCGA              TGCGGT GCGG GCCGCG               TTTGCCTAGGCCGGG  55 1
APT56_RS17345 3894667 .. 3894723 +  -4.2  -3.28712   TGCGCGACGGCATGG CGCTGGCGCCGCGCTGACACGC-CGCCC GTC GGCCGCGCGCATCAACGTGGCGGAA-CG TTATCGGACGCCAGC  47 9
APT56_RS17355 NONE
APT56_RS17360 NONE
APT56_RS17380 3904234 .. 3904254 +  -5.3  -3.15788   ACCGCTGGCGCGGGC            GCCGCATCG GAT CGATCCGGG            ATTTATCTTCTCGGC  47 40
APT56_RS17385 3905371 .. 3905412 +  -4.4  -3.72576   GCACTGCCCACGCCC GTGGGCG-GCGTCCTCGATA TCGA TATCG-GCACGCTCGCGCCC TTTGATCCCACCAAG  56 177
APT56_RS17390 3906159 .. 3906198 +    -7  -4.41494   CCATGAACCGAAAAG  CCGCCCCGGCGGTCGGAT GTCA ATTCCACCTTTGGGGCGC   TTTTCATTCGGGATG  75 73
APT56_RS17425 3911055 .. 3911076 +  -5.1  -4.77036   TGACGGCGCAATGCC           GTG-ACGACG CGC CGGCGTTCAC           TTTTTGATGATCAAG  80 129
APT56_RS17430 NONE
       groEL 3913108 .. 3913132 + -19.3  -5.81412   CCGGGGCAGCGTGAA          GGCATCGCGCC ACG GGCGCGGTGCC          TTTTTTTTGCGTCGC 100 52
APT56_RS17440 NONE
APT56_RS17445 3914285 .. 3914310 +  -7.4  -2.52464   TCAGGTCCTGACCTG         CCGCGGCCGG CGTCCC CCTGCCGCCG          TGGATTCAGAAGCGA  50 89
APT56_RS17455 3920309 .. 3920320 +  -5.8  -3.13403   GATCGTCCGGCGCGT                TGGG CCCG CCCA                 TCTTGGTGGGCACCC  50 411
APT56_RS17465 3922320 .. 3922377 +  -4.9   -3.5882   GCGAATGGCCCTCGA CCCAGAC--CTCGCCGCCATC-CGGCGCG ATCA CGC-CCGCGATGATGGCGAGCAGGCTGGA TTTACCGGTGCTGTC  54 480
APT56_RS17490 3925026 .. 3925058 + -14.8  -4.21922   CCACTGCGCTGAAAC      CACATCCGCGCGCC CTGTC GGCGCGCGGATGCC      TTTCCTTTTACATGC 100 29
APT56_RS17525 NONE
APT56_RS17530 3935676 .. 3935686 +  -4.6  -2.62184   ATCAGTCGCAGGTGA                 TCGG TCG CCGG                 TGATCTGCCGCCCCG  43 140
APT56_RS17550 NONE
APT56_RS17555 3941474 .. 3941492 + -14.6  -2.71731   TCGCAGCCATGAGGA             TGCGCCCA GGC TGGGCGCA             TCCTTCCCGGCTCAG  75 85
APT56_RS17570 3950095 .. 3950107 +  -3.3  -2.52896   CATCCAGGCCAGCCT                CAAGC AAG GCGTG                TAAGTTCCGCGATAC  39 10
APT56_RS17575 NONE
APT56_RS17580 3952444 .. 3952488 +   -15  -2.71483   GCCGTGAAGACTAAG ACGCGGGCGGCATCATGATC GTCAA GATCCTGATGCTGGCCGCGG TGGTTGCGGCACTGT  75 27
APT56_RS17585 3953109 .. 3953158 +    -4  -3.41051   CGACCGCCTCCAGCA TGGCCTCGCGC-CGCCCGGCGTA CAACT TGCGCATGGCGCGCACGTGGGCG TTGTAATGGCCATCG  49 353
APT56_RS17595 NONE
APT56_RS17600 3956690 .. 3956716 + -11.5  -3.31144   ATCTCGTCGATGAAC        G-CCGCCGGCCG CAGC CGGCCGTCGGGC         TTGTACCACTGCACC  66 118
APT56_RS17645 3966559 .. 3966572 +  -3.7  -4.82901   ACGCCGCCGTCGGAT               CCGGC ACCA GGCGG                TTTTTCTCACGCAGG  81 481
APT56_RS17710 3979321 .. 3979338 + -12.7  -4.44548   GGCAACAGCCTCCAA             CGGGACC TTCG GGTCCCG              TTTTCATTGCCTGTC  95 52
APT56_RS17715 3980155 .. 3980170 + -11.8  -4.56702   CGCGAAAAAAAGAAA              CCCCGC TTGC GCGGGG               TTTCTTTCATTGGGC 100 80
APT56_RS17745 3988031 .. 3988052 + -17.3  -4.84918   TGCGCCAAATGAAAA           GCCCCGCAC AGCC GTGCGGGGC            TTTTGTCTTTGTGGC 100 47
APT56_RS17775 3991512 .. 3991522 +  -4.6  -3.02511   CTGCATGCGGACGGA                 CTCC CCG GGGG                 TGTTGAGGCGCTCGC  46 375
APT56_RS17795 3994596 .. 3994634 +  -7.3  -3.04248   CCGGACAGCAGCATG  CGGCGCTGGCCAGTGACG ATGA CGGC-CTGGCTAAAGCCG   TATTGCACGCTATTG  52 360
APT56_RS17810 NONE
APT56_RS17815 NONE
APT56_RS17820 3997659 .. 3997679 +  -2.3  -4.07885   TGCGCCAGTGCCTTT            GAGGCGGCC ACC GCCCGCGCC            TTTTACAGGCGGATG  58 24
APT56_RS17840 4000493 .. 4000515 +  -4.6  -3.28712   GCCCCGACCGCGCGC           CAGGCCGGCG TAG CGACGGCGGG           TTGTCCGGCGCCGGC  49 13
APT56_RS17845 4002237 .. 4002261 +  -4.1  -3.53012   GCGATGGCGCCCAGC          ACCTGCGCCAC CAC GTAGGGCAGGA          TTTCGCGGGCCGGGA  49 495
APT56_RS17880 4010154 .. 4010164 +  -2.4  -4.62069   TGCCGTGCCCGGCCT                 CGCG TTC CTCG                 TTTTTCGCATAGGAC  70 87
APT56_RS17885 NONE
APT56_RS17890 NONE
APT56_RS17895 4011759 .. 4011776 + -12.7  -4.90906   CACCGCATGTGAAAA             GCCCGTC ATCT GACGGGC              TTTTTCATATTCTGG 100 75
APT56_RS17905 NONE
        dapD NONE
APT56_RS17915 NONE
APT56_RS17920 NONE
APT56_RS17925 4018495 .. 4018518 + -19.6  -4.28774   GAAGCCTGAGCCGCG          GGCGGACGGC TGGC GCCGTCCGCC           TTTTCCCTTGGGTCG 100 32
APT56_RS17930 NONE
APT56_RS17935 4020270 .. 4020303 +    -9  -3.82097   TTGCCGCCCAAGCCG     CGTCCTACGGCTG ACATCAACA CAGC-GTAGGACG     TTTCATGCCTTTCCC  69 266
APT56_RS17940 4023000 .. 4023040 +  -3.2  -2.66008   AGCGTCGCATGGCTT CCCGGCCGGTTTGACGCTGA GGT TCCCCGTCGA-CCG-CCGCG TCCTATGGCTGGTTT  40 87
APT56_RS17945 4025701 .. 4025711 +  -2.4  -3.30124   AACTCTGGCTGCAGG                 TCGG CTA CCGC                 TTCTGAGCCATAGCC  45 9
APT56_RS17950 4027509 .. 4027527 + -17.4  -3.01712   GATGGTTTCGGCCAG             GGCCGGCG GCA CGCCGGCC             TCTTCGGCCAGGCGC  82 309
APT56_RS17970 4032381 .. 4032401 +  -6.7  -4.63486   GGTCGGCCCCGGCAT            CGGCTTCGG CGG CCGCAACCG            TTTTCTTGCGGCGCT  78 440
APT56_RS17985 NONE
APT56_RS17990 NONE
APT56_RS17995 4039918 .. 4039934 + -15.1  -4.94992   CCGCCCCCTTCGAAA              CCCGGCC CTC GGCCGGG              TTTTTGTCCATTTGA 100 49
APT56_RS18000 4041276 .. 4041295 + -13.6  -5.27335   TCGAGACAAAAAAAA            CGCCAGAC GCGA GTCTGGCG             TTTTTGTTTGCGGCG 100 56
APT56_RS18035 NONE
APT56_RS18040 NONE
APT56_RS18045 4048824 .. 4048840 + -15.1  -5.26875   TCCGCCCATGAAAAA              CGCCGCG TCA CGCGGCG              TTTTTTGCTTGGACG 100 51
APT56_RS18085 NONE
APT56_RS18090 4057614 .. 4057632 +    -3  -3.76492   CCCAGGGACTTGTAG             AGCGCG ATCACCC CGCGCA             TTTCCTCCCATTGGC  53 80
APT56_RS18130 4065972 .. 4066008 + -19.6  -4.42238   AGGATGGCGGCGCTT   TGAAAACGCCCTCCCGG TCCG CCGGGAGGGCGTTT-CG    TTTTCGTTCCCCTCA 100 107
APT56_RS18135 4066858 .. 4066874 + -15.1   -4.8622   ACGCGCATGAAAAAA              GCCCGGC ATG GCCGGGC              TTTTTCATTGCGGCA 100 46
APT56_RS18205 4090454 .. 4090486 + -10.6  -4.92757   GTAAGGTTGCGCCAT     TATC-AGGCGGGGCT TTCG GGCCCCGCCTTGTTA      TTTTCTTATTACTGC 100 62
APT56_RS18210 4091066 .. 4091083 + -12.7  -4.18494   TGACGGCATGAGAAA             GGGAGCC CGCG GGCTCCC              TTTTGCGTGGCCGTC  89 60
APT56_RS18245 4102364 .. 4102380 +  -2.1  -2.64274   CCGTCTCGCCCGCGC              CGCGCGA GGA TCGCCCA              TGAATTTCCGGGGCT  38 6
APT56_RS18250 NONE
APT56_RS18255 4104323 .. 4104364 +  -6.6  -2.70932   CCGCGCAGCAGATCG GCGGCGCGCGTGATGATGA CGCCA TCATCGGCAT-TGCGCTGC TGCTTCAAGGCCCCG  46 506
APT56_RS18265 NONE
APT56_RS18270 4107250 .. 4107266 +  -5.7  -3.17392   TTATTTCGCATGGCG              CGGCCCC GCA GAGGCTG              TTGCGTTGCGGCATA  51 44
APT56_RS18275 4108000 .. 4108050 + -15.6  -4.13767   CGCTTCGCAGGCCCA GGCCTTCGGCGCC-G-GCCGG-ACGC GAC GCGTTCCGCCTCCGGC-CCGAAGGCC TTTTCGCATCCGGCG  95 45
APT56_RS18280 4108888 .. 4108922 + -18.5  -4.66833   ATGCCCCCACGCTTC     GCCCCCTGCGGGGGC TCTCT GCCCCCCGAGGGGGC     TTTTTCCCCTTGGGG 100 43
APT56_RS18285 4110642 .. 4110658 + -10.8  -5.58209   CCATCTCCGCAAAAA              GCCGGC CAGCC GCCGGC              TTTTTTTGCATTTGA 100 59
APT56_RS18290 4111912 .. 4111963 +  -8.5  -4.25104   CGGCTCCCATCGATG CCCATCAGGTCTCCAG-CCCGGGT GCCCA ACCCGGGACCTGCGGCCCGAGGGG TTTTCCTCGCAGCGC  77 159
APT56_RS18295 4112406 .. 4112423 + -11.3   -5.4505   ACGGCAAATGAAGAA             GGATGCC CACG GGCATCC              TTTTTTGTTGCCCGC 100 78
APT56_RS18305 4115188 .. 4115205 +  -2.7  -3.34404   CCGGCCGGCTCTCGA             TCTGC AGCAGCAC GCAGA              TGTTGTCGTTGATGG  45 391
APT56_RS18335 4120989 .. 4121014 + -10.3  -3.75024   CCGCGCCGATCCGGG         CCCGGCCGCCA CGCG TGGGCGCCGGG          TTCTTCATCATCACG  74 42
APT56_RS18340 4122035 .. 4122047 +  -5.5  -2.52464   TGCTTGAAACGGGCT                GCTTG GGG CAGGC                TGCCTTGGGCAGGCC  45 44
APT56_RS18345 4123347 .. 4123369 + -12.6   -3.9777   TGACTGCCTTACTTC           GCGGGCGCCG TGG CGGTGCCCGA           TTTGTCCATCTTGGC  84 233
APT56_RS18365 NONE
APT56_RS18370 4127838 .. 4127857 +  -9.2  -3.50853   GGCTGATCTGGTGCA            TGGCGGCC TCTG GGCTGCCG             TTGTCGTTGAAGCGG  61 290
APT56_RS18385 NONE
APT56_RS18390 NONE
APT56_RS18395 NONE
APT56_RS18400 4133665 .. 4133699 + -19.4  -2.52464   TGGAAGGTCAGCGCC     CCCCCGAAGGTTGGAT TGC GTCCAGCTTTCGGGGG     TCAGTTCACGCGGGC  89 101
APT56_RS18415 NONE
APT56_RS18420 NONE
APT56_RS18425 4139171 .. 4139222 + -10.8  -3.53012   CCGAGCAAACTGAAG CC--GGCGTAGC-CGAGCGCGCCGC CGTAC GCGCCGCGCTCGAGCATCGCCACGG TTTCGGCCGAGAAAG  69 160
APT56_RS18450 4143818 .. 4143840 + -10.5  -3.96148   CGCCCCGCCGCGACG           CTACGCGCC GCTCA GGCGCGCAG           TTTCTCGTCCAGGGC  78 83
APT56_RS18470 4147221 .. 4147238 + -14.1  -3.08278   CCGCCGCCGCGCCGT             CGGGGCG CATC CGCCCCG              TCTCTCTGTCATTCC  76 41
APT56_RS18475 4149134 .. 4149147 +  -3.1  -4.82901   CTTGGTTCCTGATTA               TTCTC ATCG GAGGA                TTTTTATGAGCAAGC  75 179
APT56_RS18480 NONE
APT56_RS18485 4150827 .. 4150852 + -16.1  -3.59979   GCTGCCCAAAAAAAA         GCCCCGCAAGC GCTT GCCTGCGGGGC          TTTGGGGTGCGCGCC  90 72
APT56_RS18495 NONE
APT56_RS18500 NONE
APT56_RS18505 4156340 .. 4156351 +  -4.4  -4.82901   AACATCCCGGACAAA                TGCA GGGG TGCA                 TTTTTGTGCCGGCAG  78 214
APT56_RS18510 4158007 .. 4158034 +  -8.4  -3.01712   GCCAGCGCGATCAAT        TCGCGCGTCTTGG CAT CCAGG-TGCGCGG        TCTTGGCGCCGGCGG  55 325
APT56_RS18565 4171387 .. 4171433 +    -2  -4.68209   CGGTCTATCGTAGCC CCGCGCACGGCCGCGGGGCGT GCCAAG ACGCTACGCCGCCG-GCAAGA TTTGTTTCTTGCGGT  70 514
APT56_RS18610 4176521 .. 4176556 +  -2.5  -3.58343   GATCGTCAAGGACTC   GGGC-GCGAAGG-TGGA GTGA TCCGGCCGTGGCTGCCC    TTTACGCCTACTCCA  50 7
APT56_RS18615 NONE
APT56_RS18620 NONE
APT56_RS18625 NONE
APT56_RS18630 NONE
APT56_RS18635 4181206 .. 4181232 +   -13  -3.53012   AAAAAAACCAACCAG        GCGCAGCCGCC GGCACA GGCGGC-GCGC         TTTCCACAAGGAGAC  78 48
APT56_RS18640 NONE
APT56_RS18645 NONE
APT56_RS18650 4184236 .. 4184255 + -16.4  -3.29324   CGGGATTGCGCGCCT            GCGCGGCG GGCC CGCCGCGC             TTGCCTTTACATCCC  89 64
APT56_RS18655 4184803 .. 4184836 + -13.7  -3.32698   CGCCCTGCCGTCGGC     GCCGCCAGCGGCACG CAAG CGCCCCGCTTGCGGC      TATTCTCTGGGCTGC  80 78
APT56_RS18660 4185655 .. 4185672 + -12.7  -3.33696   CCGCGGTAAGAAAAA             GCGAGGC GGCA GCCTCGC              TTGATTGCGCGCCGC  77 32
APT56_RS18680 4188938 .. 4188954 +  -3.5  -4.35524   GCACGCTGAAATTCA              GGCGGAC AAA GCCCGGC              TTTTCGATTTCGCGG  67 235
APT56_RS18690 4190972 .. 4191019 +   -11  -2.54193   GGAAGCCGGATTGCA TGGCGGCCTCGGCGTCCCGACG ATCC CGGCGCGACGCCGCCGCCGGAA TAACTTGCGGTCATG  62 128
APT56_RS18695 NONE
APT56_RS18700 4193538 .. 4193550 +  -9.1  -3.61178   TCCGTTTTCTACACG                TCGGC CCG GCCGA                TTTCCCGTCCCTGGA  68 45
APT56_RS18705 NONE
APT56_RS18710 NONE
APT56_RS18715 NONE
APT56_RS18720 NONE
APT56_RS18725 4199724 .. 4199738 +  -4.2  -3.37464   TTCACGTCATCAAGC               GCTTGC TGG GTGAGC               TTGTCACGTTCCTCC  47 406
APT56_RS18765 NONE
APT56_RS18770 4206788 .. 4206810 + -14.9  -2.70932   GCCGCCCGCCGGCGC           GGCCATGCG GGTTG CGCATGGCC           TGGTTCGAAACCGGC  75 58
APT56_RS18775 NONE
APT56_RS18780 4209412 .. 4209424 +  -4.7  -2.74012   CGCGCGTTCGGCGGC                GCCGC GAT GCGGA                TGGTTGACGTCATGG  43 243
APT56_RS18790 4211559 .. 4211585 +  -5.6  -3.31144   CGCGGCCGGTGCTGC         GGGCCGCGTAGG CGA CAGGCGCGGGCC         TTGTCGCGGTAACGC  53 15
APT56_RS18795 4213310 .. 4213344 +  -3.4  -2.97171   TACGCGTCGGGCATA     AGCAAACCGCCATAAA GTC TTTGTGGCGGACGGCA     TGGTTTCCTACAGTA  42 120
APT56_RS18800 4214352 .. 4214379 +  -3.9  -3.24902   CGGTGGTGCGGGCGA        CCGGAGCCAGC CTGTGA GCGTGCGCCGG         TTGCTGGTGCTGTTC  47 9
APT56_RS18805 4215628 .. 4215657 +  -6.3  -2.62983   CCACCAGGGACAGCG       TCAGCGCGCCG-GC CGC GCGCAGCGCGTCGA       TGATGTAACCCTCGG  45 377
APT56_RS18815 4217083 .. 4217099 +  -6.5  -2.74192   GGTTGAACAGCACCC              GCGCG AACGCCA CGCGC              TGCTGTTCGCCGATC  46 368
APT56_RS18830 NONE
APT56_RS18835 4221659 .. 4221676 + -14.1  -5.79588   GGTTTGCCGGTCTTG             GGCGCCC TTCG GGGCGCC              TTTTTTTGGTTTTAC 100 71
APT56_RS18840 4223421 .. 4223452 +  -2.8  -2.86475   CAGCAGCTTCGCCGC      GCTGCTGCGCGAGGC GAC GTGACGC-CAGCCGC      TATCATGTGCGATTG  41 4
APT56_RS18845 4223976 .. 4224007 +    -5  -3.65046   ACGGCAAGCGGCTGA      GCACGTAGCGCATGG CGT TCAGGCGC-GCGCGC      TTCTTGCAGTCGGAC  54 128
APT56_RS18855 NONE
APT56_RS18860 4227255 .. 4227267 +  -5.5  -3.57144   GTCATGGTGGCCGGA                TGCTG GAT CAGCG                TTTCCGGATCGCCCA  54 307
APT56_RS18895 4234971 .. 4234986 +  -3.2  -3.61398   GAAGTTCTGGATCAC              GG-CGCG CTG CGTGTCC              TTGTTGAAGCCGCGC  51 329
APT56_RS18915 4239848 .. 4239864 +  -2.9  -3.21218   CGATACGCCCACCAC              TTCCCAT CAA AGGGGGA              TTCATCATGACGACT  45 116
APT56_RS18920 4240558 .. 4240616 + -15.3  -2.50994   CCGAACGGCATGTTG TCGCGCAGGATCTTGACC-TCCTGGCCG CCTT CGTCCAGGGTGGTCAGGGCGCTGTGCGA ATTGCTCGGCTTGAC  69 266
APT56_RS18940 4244504 .. 4244530 +  -5.1   -3.5511   TGGAAATACTTGGCG        CACCAGATGGCG GTGT CGCGGTC-GGTG         TATTTCTCGATCAGG  54 477
APT56_RS18950 4245632 .. 4245659 +  -7.7  -2.52516   CCAATAAAAAAAAAC       GGCGGTCCTGTCG ATCC CGGC-GG-CCGCC        ATTCGTCGTGGGACA  50 34
APT56_RS18955 4246711 .. 4246764 +  -5.8  -4.56597   GTCGGGCGCCAGCCG GGCGTTGACCAGCTCGGCCG-GATCG ATGC CGTTGGCGGCCGCG-TGGGCCGCGCC TTTTTCCAGCAGCGC  78 481
APT56_RS18975 4249578 .. 4249622 +  -8.3  -3.28712   TCGGGCGACTGGCGC GCGTCGGGTGCGGCGATGAAG GCG CGGCATAGCGGCGCCAGGCGC TTGTCGCGCGGCAGC  59 345
APT56_RS18985 4251182 .. 4251200 +  -4.4  -3.57144   GCCTGCGCCAGCACT             GCCGCGTC CTC GAAGGGGC             TTTCGCGGTCGCCGC  51 205
APT56_RS19020 NONE
APT56_RS19025 NONE
APT56_RS19030 4272529 .. 4272548 +  -3.5  -3.90112   GCTTCGACGAACTGG            CCGCC GAGGCCTGAG GGCGG             TTTCCTTCCCCCGCG  56 12
APT56_RS19035 NONE
APT56_RS19040 4274528 .. 4274538 +  -2.4  -3.40611   GATGATCTTGGATAC                 CAGC TCG GCGG                 TGTTCTTGGCGTCCA  47 82
APT56_RS19050 NONE
APT56_RS19055 4277293 .. 4277316 + -15.2  -2.62184   TGCGCGTAAACGTTT          CCGCGGCGCC CCCG GGCGCCGCGC           TGCTGTGCGCGGCCC  74 78
APT56_RS19060 4277837 .. 4277895 +  -6.5  -2.78596   CGGTACAGTAGGCCC CGTGC-GCGGCGGCCCGCCCGGC-CGG GAGGTCG CCGCGCCAGCCGCGCCGCCGTTGGAGG TATCCTAGGCACCTG  48 30
APT56_RS19065 4278969 .. 4279000 +  -2.3  -3.29144   CCAGGAAGGTCAGCG      GCGTGATGATCATC AGCGG GATGATCTGCA-GC      TTCTCGAAGCCGTCG  45 343
APT56_RS19080 NONE
APT56_RS19085 4282422 .. 4282439 +  -8.3  -2.78463   CCACGCGCACCGGCC             CGGCGCG CCCG CGCACCG              TGTAGTGCGCCCCCT  53 44
APT56_RS19090 NONE
APT56_RS19095 NONE
APT56_RS19100 NONE
APT56_RS19105 4286110 .. 4286137 + -11.2  -4.08216   CGCCAGCGCTCCGGT        CACGGCG-GCGGC CGC GTCGCGCGCCGCG        TTTTCCAGGGAATCA  79 119
APT56_RS19205 4328342 .. 4328364 +  -4.6  -3.17075   CGGTGCTTTCCCACA           CGCCGGCCTC GGC GCGGCCGCCA           TTGCCTTCGAAGGCG  47 324
APT56_RS19240 NONE
APT56_RS19245 4337784 .. 4337804 + -19.7  -2.66634   CTCTTTTCCTGGATC            GCCCCGGGC GCG GCCCGGGGC            TCATCTCATCCCCTG  90 46
APT56_RS19250 NONE
APT56_RS19255 NONE
APT56_RS19260 4341402 .. 4341424 + -16.2   -2.8806   CGCGTCGACGACGCC           CGGGCGCGGC TTC GCCGCTCCCG           TGTATACCCGCCTTT  80 122
APT56_RS19275 4344661 .. 4344681 +  -4.5  -3.53091   CCTGCCCGCCCTCGC            GGTGCGGCG CCA CGACGAGCC            TTTGCGCGACCCGGT  52 503
APT56_RS19285 4345985 .. 4346030 +  -7.3  -3.02144   CAGGCGGGCGCATGG ACGATGCCGGCGCCGGCCGCGG CGG CCGTGACCA-CGCCGTCAACGG TATTCGAGCGCATGC  52 238
APT56_RS19295 4348431 .. 4348459 +  -7.2  -3.49837   CTTGAATGGTCTGTG        CCCGCCGCGATC CTGAT GTGCGCCGCGGG        TCTTTGGATTGTCTC  57 204
APT56_RS19300 NONE
APT56_RS19305 4352610 .. 4352623 +  -4.5  -2.56596   GCCGGGCACGCCAAT               TGCTG GTTG CGGCA                TCCGTTCATGCCGCC  41 89
APT56_RS19310 NONE
APT56_RS19315 NONE
APT56_RS19320 4355464 .. 4355494 +  -9.7  -3.03441   GTCCAGGGGCTGATT      GTTGGCCAGGCGGGC ATT GCCCGC--GGCCCAC      TCTTCGAAGGTGATG  59 514
APT56_RS19335 4357976 .. 4357989 +  -3.1  -2.82759   GTCGGCAAGCTCGCC               TGAGGC CGC GCC-CA               TGTCCTCGCTCTCTT  41 23
APT56_RS19340 4359883 .. 4359914 +  -9.3  -2.56596   AATCCGCGTCCTGAA      C-GCCGCGCGGCCC ATCGC GGGCCGCGCCCCCG      TCACTTCCTACACAA  55 27
APT56_RS19345 NONE
APT56_RS19350 NONE
APT56_RS19355 4363224 .. 4363248 +  -8.5  -3.61398   GGCGACCGCGACCGA          CAGCGTGGC CGGCAGC GCCACGCCG          TTCTTGACGGCCAGG  63 137
APT56_RS19380 NONE
APT56_RS19385 4369519 .. 4369541 +  -9.1  -3.21218   GCACCCGCGCTTCTA           GCGCCGC CGGCCGGGA GCGGCGC           TTGCTGGTGACGGGT  62 25
APT56_RS19390 4369893 .. 4369933 +  -7.4  -3.85698   TCGGACGACGCATAA GCGGCCCCTGCGGAGGCGG CGCG CCGCCTCCACACGT-CCGA  TTTCTCCGCCGACGG  67 26
APT56_RS19395 4371874 .. 4371890 + -10.1  -3.01712   GAAGATCCGGCCGAC              GCGGTTC TTC GGACCGC              TCTTGGCCACGAACA  59 351
APT56_RS19410 4376289 .. 4376318 + -13.5  -3.01791   CGGCCAGCACCACCG       CCCGCGCGATGCG GTTG CGCATCTCGCGGA        TATTGCCGGGCCAAT  69 317
APT56_RS19425 NONE
APT56_RS19430 NONE
APT56_RS19435 4381617 .. 4381632 +  -4.6  -3.54424   GTGGATCGACGTCGC              GCGGGT ATGA ACCCTC               TTTCAAGGAATCCCG  53 16
APT56_RS19440 4382958 .. 4382970 +  -6.9  -2.89564   CATCAAGAGGCCGCA                GCCGC AAA GTGGC                TATATCAAATAACCC  49 73
APT56_RS19445 NONE
APT56_RS19450 NONE
APT56_RS19455 4387195 .. 4387253 +  -8.1  -3.41745   CCTGATCGCCGACGC GCGC-CGC-CAGCGCGT-CGCGCAGCAC GATCTG GCGCTGCGCGTACTCGGTGCGCATGCGC TTGATGTTGTGCGAG  58 464
APT56_RS19465 4389870 .. 4389905 + -19.7  -3.56366   CGCTGTAGCGGCGGC    GGCGGCCGGGGCG-GC AGCCC GCGCGCCCCGGCCGGC    TTTACAAGAATTATT 100 33
APT56_RS19470 NONE
APT56_RS19475 4391625 .. 4391645 +  -6.7  -3.03124   GTTGAGAATCATTAC            GGGGTTCGG CGT CCGATCCGC            TCTTAGCAGGTAAGC  50 199
APT56_RS19480 4394400 .. 4394444 +  -7.8  -3.17075   TGATATATCAAGCGG ACTGGCCGGCGGCCGATCCGTT GGC GATGGACCGGC-GC-GGCCGGG TTCGGTTCCCGCGAC  55 260
APT56_RS19520 4403868 .. 4403895 + -20.6  -3.18264   GTCCGGATGCTGAAA        CGCCGCGTGTCC CGAC GGACGCGCGGCG         TTCATGCGTGACCGC 100 28
APT56_RS19530 4406732 .. 4406753 +  -4.3  -3.35679   GAAGTCGCGCGCCGT           GGCATTCAG GCAG CAGAACGCC            TTCTCGATGCCGCCG  47 439
APT56_RS19540 4409224 .. 4409237 +  -2.3  -4.25104   CCGCAAGACCGCGTC               GTCGG CTTC CCCAC                TTTTCCTGGAGAAGA  63 395
APT56_RS19545 NONE
APT56_RS19550 4411514 .. 4411537 + -10.3  -3.62046   ATGCCGCGGATCTGG          CGGCTG-GCC ATGCA GGCGCAGCCG          TTCTTGCGCACCTCC  67 281
APT56_RS19570 NONE
APT56_RS19575 NONE
APT56_RS19580 NONE
APT56_RS19585 NONE
APT56_RS19590 NONE
APT56_RS19595 NONE
APT56_RS19600 4419778 .. 4419804 + -12.2  -2.70476   GCGGCCGCCCCGCAA         ACCGCGCCGG CCCGAAC CCGGCGCGGA         CTTCTCCTTCGAGGT  65 57
APT56_RS19625 NONE
APT56_RS19630 4426205 .. 4426224 +  -7.8  -3.29461   CACGCCCTTGCCCGG            CCTGGCGT CAGA ACGCCACG             TTGTCGCCGCCCTTC  57 157
APT56_RS19650 4430463 .. 4430486 + -10.2  -2.71712   ACGGCAAGCCAGCAA          ACCGGACGCT CGGG GGCGTCCGGC           GTTTCACCGGGGCCC  59 72
APT56_RS19655 NONE
APT56_RS19660 NONE
        livF NONE
APT56_RS19670 NONE
APT56_RS19675 4435706 .. 4435763 +  -8.9  -3.14132   GGGCGGCTGGTTGAT GACCTGACCGTGGCACGGCCAGCCCGC GTCCTG GCGGGCGAGCCGCGGCGCGG-C-GGAC TTCGTGCGAACCCGC  57 19
APT56_RS19690 4440369 .. 4440396 +  -9.8  -4.00042   CTGGCCTGATCCGGC        GCCCTGCC-CCGC CAT GCGGCGGTAGGAC        TTCTTTGGTAAAAAC  75 32
        acnA 4443359 .. 4443386 + -21.4  -5.40072   GGCCGCAAAGGCAAA        GCCCCTGGAACC GCGA GGTTCCAGGGGC         TTTTTTTCAGGGCCG 100 47
APT56_RS19710 NONE
APT56_RS19715 4448102 .. 4448113 +  -2.2  -4.42386   CGGCGAGTGCACCCT                TTCC CCCC GGAG                 TTTTATCGATGAAAA  65 218
APT56_RS19720 4448704 .. 4448728 + -13.6  -5.81412   GGCAGGTACGAAAAA         GCGCCAG-CCC TTCG GGGTCTGGCGC          TTTTTTTTGCCTGGC 100 47
APT56_RS19810 4467280 .. 4467299 + -13.6  -5.08088   CCGCGCCATGCCCTC            GCGCCTGT TTCG ACAGGCGC             TTTTTCTTGCCCGTT 100 55
APT56_RS19815 NONE
APT56_RS19820 4469829 .. 4469860 + -21.6   -4.4078   CGCGCGACAGGCTCG      CCGCGCCCCGATCC GCGA GGATCCGGGCGCGG       TTTTCATTGGGGCGC 100 46
APT56_RS19860 4481631 .. 4481666 +    -3  -3.53091   GCGCGGCCACCGCCG    GCGCGGCCGGCGTCGT GCGC GCCACCTCGGCCAGGC     TTTCCAGCAGCACCT  47 218
APT56_RS19870 4484538 .. 4484569 + -21.6  -2.52464   GTCGGGCACGGCGAT      TGCGGGCGTAGCGG ATTT CCGCTGCGCCCGCG       TCAGTTCCGCCCCGG 100 71
        gabD 4486130 .. 4486145 +  -8.2  -3.85817   CCGGGGGAAGATAAA              CGGGGC TCCG GTCCCG               TTTATCCCCAGGAAT  69 69
APT56_RS19880 4487214 .. 4487242 +  -4.5   -3.5525   CGGGGTAATCCCTAG        GAATTATCCACAG TAT CTGTGGACAACCC        TTTGGAAAGGTCTGT  51 100
APT56_RS19920 4498814 .. 4498832 +  -5.9  -2.64616   GATGACTTCCGCCGC             GCGGTGG AGATG CTGCCGC             TGGTGTCCATCGACC  45 126
APT56_RS19925 NONE
        cpsB NONE
APT56_RS19935 NONE
APT56_RS19940 NONE
APT56_RS19945 4503147 .. 4503161 +  -3.4  -3.70902   CGCCAACCGCTGCCC               GTGGCC TGA GGCTCC               TTTCAGTGTGAACAG  54 17
APT56_RS19950 NONE
APT56_RS19955 4505473 .. 4505496 +  -2.2  -2.73124   ATCCCCAGCCATGGA          GCCGCCATGC ATCC GCACCGCCGC           CTTTCCACGCTGCAC  38 48
APT56_RS19960 NONE
APT56_RS19965 NONE
APT56_RS19970 NONE
APT56_RS19975 NONE
APT56_RS19980 4510778 .. 4510790 + -10.5  -2.71681   CTGCACCGCGATATA                GGCCG CCT CGGCC                TGATTGCGCGCGTTC  56 177
APT56_RS20000 NONE
APT56_RS20005 NONE
APT56_RS20010 NONE
APT56_RS20015 NONE
APT56_RS20020 4522725 .. 4522765 + -14.1  -4.08692   TCCCGCTTCTAGCCC TGCCGGGGCGGATGACGGG CCGGC CCCGTCTTCCG-CCCG-CA TTTTCAGGAGACTTC  93 29
APT56_RS20025 NONE
APT56_RS20030 NONE
APT56_RS20035 NONE
APT56_RS20040 NONE
APT56_RS20045 4529399 .. 4529446 + -22.1  -3.55444   CGGGCGCCTGATGCC GACAC-GGGCG-CGGCGACGGGCG ATC CGCCCG-CGCCGCCGCCCAGGGTC TTTCACCACTGCCCG 100 30
APT56_RS20060 4532728 .. 4532740 +  -4.7  -4.85782   CGCAATACGGATGAC                GGCGC GCA GCCCC                TTTATTTTTAAGGGG  81 27
APT56_RS20065 4534677 .. 4534732 +  -6.8  -3.53811   GGGCGTCGCGCCGCC GCCACACGGGAAGACCCTGTACGTACA TGC TGTACGTACAG-GTGTACACTGGCGGC TTTCAACCCCCTGAC  57 51
APT56_RS20070 NONE
APT56_RS20075 NONE
APT56_RS20080 NONE
APT56_RS20085 4539039 .. 4539052 +  -5.2  -3.53012   CATCCGGCCGGCGCC               GGGC CTGAAC GCCC                TTTCCAACGGGCGGG  53 55
APT56_RS20120 4545429 .. 4545463 +  -4.8  -3.55444   CGCCAGCAATCCCAT     GTGCGCATGCGCCT CCCGGCA AGGCGGCCGCGCGC     TTTGCGCGATGCCCC  54 161
APT56_RS20130 NONE
APT56_RS20135 4546888 .. 4546901 +  -3.7   -3.0264   CGGGCCCTCGCGGCC               CGACC CGGT GGACG                TGTTCGAACAACTTT  44 44
APT56_RS20140 4547320 .. 4547373 + -15.9  -3.01712   AGCAGCGTGACCGGC CGCGC-CGCCGGCCAGTAGG-GCCG CAGGAT CGGCGCCAGCCGGCCGGCGCGCACG TCTTCGGCCAGCAAC  78 138
APT56_RS20150 4548868 .. 4548883 +  -3.2  -3.28791   CTCGCTCGCCCCTCA              CC-CGGC CAG GTCGCGG              TTATAGGCCAGGAAT  45 48
APT56_RS20160 4549661 .. 4549708 + -13.4  -3.16564   GTGCGCACCGGCCGC GCAAAC-GAAAACGGCCTGGCGA AAA TCGCCAGGCCGTTGCCAGAATGC TTGATGCGCTGCCGC  72 98
APT56_RS20170 4550941 .. 4550965 + -12.9  -3.90286   CCGACCAAACAAAAA          GGCCTTCGATC CGA GATCAAAGGCC          TTTCCATTTGTACTG  86 462
APT56_RS20190 4554082 .. 4554111 + -22.1  -2.73771   CCCCGCCTGAGTCCA       CGCGCGGCCCGCG TCGG CGCGGGCCGCGCC        CTTTCCCCCGTATCG 100 31
APT56_RS20195 4555789 .. 4555799 +  -4.6  -5.13473   CACCAGTACGCTTCA                 GCGG CTC CTGC                 TTTTTTCGGTCTGGT  89 483
APT56_RS20200 4559613 .. 4559654 +  -9.4  -2.70932   GCGGGCCCCGCGCCC GCTGC-CGC-CGTCGCCGCG CGGC CGGTGCGATGCGCGCGCAGC TGGTTCCACAGCAGG  52 426
APT56_RS20220 NONE
APT56_RS20225 4568062 .. 4568085 + -16.8  -5.81412   GCACCAAACAAAAAA          CCCGCAGAAC GTGA GTTCTGCGGG           TTTTTTTTAACTGCC 100 148
APT56_RS20260 4575215 .. 4575240 +  -2.4  -3.53224   TTCACCTGCTGCGCC         TGACGGCGTG CTCGTT CGCGCTGGCG          TTTGCCCCGGCGCTC  47 59
APT56_RS20265 NONE
APT56_RS20270 4576621 .. 4576643 + -16.3  -4.32857   TCCGAGCAAAGCAAA           GGGCCGCGT TACCT ACGCGGCCC           TTTCTGTTTGCCCCC 100 58
APT56_RS20290 4581038 .. 4581061 + -13.8  -2.78384   GCGACGCAAAAAAAT          AGGGACGGGC ATCG GCCCGTCCCC           TGTCATCGGCCACCG  71 24
APT56_RS20300 4583057 .. 4583084 + -19.2   -4.8622   CGCGCCATGCGAAAA        GGGCGTCCC-GCC ATT GGCCGGGACGCCC        TTTTTCATTGCCGGC 100 61
APT56_RS20345 NONE
APT56_RS20350 NONE
APT56_RS20355 NONE
APT56_RS20360 NONE
APT56_RS20365 NONE
APT56_RS20370 4598277 .. 4598290 +  -4.5  -2.70932   ATTGCTCCCAGCGAT               TGAGG CTGG CCTCG                TCGTTGAAGCGCAGC  43 387
APT56_RS20380 NONE
APT56_RS20385 4599846 .. 4599867 + -14.4  -5.64274   CCTCCGGGCGATCAC           GCCCCCCG CCAAGC CGGGGGGC            TTTTTTTGTGGATAA 100 98
APT56_RS20395 4602035 .. 4602060 + -11.7  -3.40403   GGCGCGCGAAATAGG         CCGGCGCGGCG CACA CGACGCGGCGG          TTGTGCTCGCCCAGC  69 439
APT56_RS20405 NONE
APT56_RS20410 4604559 .. 4604607 + -10.9  -3.18126   GAGAAAGAGGTAAAA C-CTCGACTGCGC-GCCGCGGGC CTGCC GCCCGCCGCCGCGCCTTCGGGAG TTGGCTCTGATTTCT  68 95
APT56_RS20415 4604911 .. 4604951 +  -6.6  -4.15222   GCGCGCGCCTGACCC  CGCCCCGAGCCTCCGACA CATCC TGTCGGCGCCGCCGCGCG  TTTCTTCACACAGCT  68 29
APT56_RS20440 4608959 .. 4608971 +  -7.7  -2.99719   GCGGTCGGGATTCGG                TCCGA TGT TCGGA                TATACTGTTTATCCA  54 73
APT56_RS20445 4609430 .. 4609455 +  -3.2  -3.46586   CCGCCGCTGGCCCTT         CGGCTACGGCC AGGAA GGCTGAA-CCG         CTTTTCTCTTTCCCG  49 172
APT56_RS20450 4609883 .. 4609894 +  -2.2  -2.64472   CGCGGCGGCACCCGT                GAGG TATT CTTC                 TCCGTTTGCAGCATG  38 54
APT56_RS20455 4610566 .. 4610578 +  -4.8  -3.40403   GGACCTGCCGGCGCG                CGTG GCCAG CACG                TTGTACTGAGACGCG  51 4
APT56_RS20460 NONE
APT56_RS20465 4615080 .. 4615100 + -11.8  -5.27206   CTGATCACGCAAAAA            GCCTCGGC CACGC GCCGGGGC            TTTTTCTTGTCTGTC 100 505
APT56_RS20495 4619809 .. 4619824 + -11.8  -4.13767   GCGGCGCGGGCCAGA              GCCCCC GCGA GGGGGC               TTTTCCGCTGGGCGG  85 141
APT56_RS20500 NONE
APT56_RS20505 4621429 .. 4621441 +  -3.4  -3.84674   GGTAAGCCGGTATCC                CTTG TAGAT CAAG                TTGTTCTGATGCACT  58 279
APT56_RS20525 4624890 .. 4624923 +  -7.9  -3.96624   CAATGAAATCCTCGG     GCGCGTCCTCGACCC GCCA GGGCTGCGCGCGCGC      TTTCTCCTGCGCATC  69 368
APT56_RS20545 NONE
APT56_RS20550 4629009 .. 4629023 + -12.8  -3.74693   CCCGCCGTGTCACAC               CGGCGC CAT GCGCCG               TTTGGTACACTGCAA  84 42
APT56_RS20555 4629794 .. 4629827 + -18.1   -3.2056   GGCGGCGTGACCGCG     C-GCGCCGGCTCGCGC ATC GCGCGGCCCGGCGCAG     TTCGTGAATCTCCGT  93 31
APT56_RS20560 4631251 .. 4631282 +  -3.6   -3.7941   ACCAATACGATTTCC      TGCGCCTGCGCTCCT ACG AGGA-CGAGGCCGCG      TTCTTCTCCCAGATG  54 50
APT56_RS20565 4632650 .. 4632670 +  -4.6  -3.53012   CAGGTCATGGGGCAG           CCGCCACCG CACC CGG-GCCGG            TTTGCGGGCCGCCAC  53 387
APT56_RS20580 4634680 .. 4634700 +  -9.6  -2.57564   CGTCGCTTCGTCCTA            GCGCCCGC ATCCC GCGGACGC            ATTCTCCGCCCCTGG  55 79
APT56_RS20585 NONE
APT56_RS20590 NONE
APT56_RS20595 4639143 .. 4639153 +  -2.4  -3.30771   GCACCCAACCGATGA                 CGAG GGC CGCG                 TTCTCGGCCCTGTCG  45 125
APT56_RS20610 NONE
APT56_RS20615 NONE
APT56_RS20620 NONE
APT56_RS20625 4646446 .. 4646457 +  -2.2  -3.75169   GTGCAGCATGGTTCC                CGGT TGTT ACTG                 TTTGCTGACGTGATG  53 94
APT56_RS20630 NONE
APT56_RS20635 4648073 .. 4648086 +  -2.4  -3.03771   AAACCACCATCACCC               TCAG CTACCT CTGA                TGTTCAAGGCTGTCG  41 12
APT56_RS20640 NONE
APT56_RS20645 4649524 .. 4649538 +  -2.1  -3.90586   CGGGCCGCTCCGGCC              GG-CGT CAAC ACGTCC               TTTATCCGCTGATAT  55 65
APT56_RS20650 NONE
APT56_RS20655 4652876 .. 4652890 +  -8.5  -3.05963   TGCCGCGCAAATGGC               CCCGC ACTTC GCGGG               TCTTGCGCTGGAACT  55 213
APT56_RS20670 4660913 .. 4660962 +  -8.4  -3.64703   CAAAACAGTCACTTA CCCGGCCACCAG-CGGCGCGGTCG CGGC CGGCCGCGCCGACCCGTC-CAGGG TTTCCCTAACGCCCG  65 151
APT56_RS20675 NONE
APT56_RS20680 4662610 .. 4662635 +  -7.5  -2.64616   TGCGGTGACGGTGCG         CGCCGGAC-CCA GCG TGGCGATCGGCG         TGGTGTCGCTGAAGC  48 122
APT56_RS20690 4664941 .. 4664979 + -23.2  -4.14392   CAAGAGAGAAAAGAC   ACGAAGGCCCCGCCGGCT ACA AGTTGGCGGGGCCTTCGC   TTTTGGACCTTGAAA 100 153
APT56_RS20695 4667396 .. 4667410 +  -9.2  -2.52464   GCGCGCGGATATCGC               GCGCCG CGC TGGCGC               TGCGTTGCGCCAGCG  51 521
APT56_RS20705 4669768 .. 4669815 + -10.5  -3.14132   ACGGGCGCGGTGGGC CGACCGGC-GCGC-AGCGCGGCTC CAG GCGAAGCGCTTGCGCGGCCGG-CG TTCGTCCACCACGCC  63 40
APT56_RS20750 4693041 .. 4693053 +  -6.2  -3.37796   GGTGGCGTAGATCAG                GCGC TTGCC GCGC                TTGTCGATGGTGACG  52 216
APT56_RS20760 NONE
APT56_RS20765 4695594 .. 4695631 +  -7.5  -3.03124   CGTGTGATGCGCGGC   GCAGGCTGGCCCTGCCG CCCT CCCCGGCGCCAGCCTGG    TCTTGGCGCCTCGCC  54 34
APT56_RS20770 NONE
APT56_RS20785 4700195 .. 4700214 +  -4.8  -3.05384   CATCCGCCTGGACTA            GGCGCGGG CCGG CCCTCCCC             TTCCCTCCCCCCAAC  47 25
APT56_RS20790 NONE
APT56_RS20795 4702428 .. 4702454 + -11.6  -3.09492   CATCCAGCGCCTGCG         CCAGCTTGTCCA GGC TGGACAGGCTGA         TGTTGGCATTGCCCG  62 434
APT56_RS20805 4703630 .. 4703664 +  -2.8  -3.22223   ATCGCCGCCTCGCAG    C-GGTCGGCGTCGCCG GTGAG CAGCG-CGTCGATCAG    TTCCTGGTGCGATTC  43 112
APT56_RS20815 NONE
APT56_RS20820 4707025 .. 4707064 +  -6.9   -3.1994   GGTCGGTTTCTAGGC  GCGCCGGGCGCGGCGGCG GAACA CGCCGCCG-GAAAGGGGC  TTGATCGGTCATATG  54 28
APT56_RS20825 NONE
APT56_RS20830 4710216 .. 4710232 +  -6.5  -3.58854   TGTGCACGCCGACCA              CGACCAG GCC CTGGTCC              TTGTACTTCTGGTTC  57 385
APT56_RS20845 NONE
APT56_RS20850 4713898 .. 4713921 +  -8.8  -3.13522   GGGCAGGTCTGGTGC          GCGGTGTCGA CCAG TTGGCGCCGC           TGTTCGTCCGACAGT  56 211
APT56_RS20865 NONE
APT56_RS20870 NONE
APT56_RS20875 4718452 .. 4718464 +  -3.3  -2.96695   CTGCGCTGCTTCCAT                CCCCA GAC TGGAG                TGCTTTCGTGAGCCC  42 2
APT56_RS20880 NONE
APT56_RS20885 NONE
APT56_RS20890 4723025 .. 4723056 + -15.8  -4.30995   CCTCCGCTTGCTTCA      TCCTTTGCCGCCGG CGAG CCGGCGGCAGGGGC       TTCTTTTGTCCAACG 100 63
APT56_RS20895 NONE
APT56_RS20910 4727423 .. 4727439 +  -4.3  -3.29461   TTCTCCGCGCCCAGA              GCCGCTC CTA GACTGGC              TTATCGCAAGCATTC  47 96
APT56_RS20915 NONE
APT56_RS20920 NONE
APT56_RS20925 NONE
APT56_RS20930 NONE
APT56_RS20935 4732834 .. 4732847 +  -3.1  -2.93332   GGCTACCCCGGAGAG               GTCGCG TGT CG-GAC               ATTGTTGTCTACGTC  42 216
APT56_RS20940 NONE
APT56_RS20945 4734986 .. 4735002 +  -3.6  -3.53343   AAGACTGCCACCCCA              TCGCGT TCAGC GCGCGG              TTTGCGCCGGCCGTT  49 60
APT56_RS21005 4746255 .. 4746290 +   -27  -3.17075   CACGCCATGGGACAA    GAGGCCCCGCGCATCG TCGC TGATGCGCGGGGCCTC     TTGCCTTGCGGGGCG 100 45
APT56_RS21010 4747946 .. 4747957 +  -7.2  -3.47941   TTGGCGGTCAGGATG                CCGC CCTG GCGG                 TTCTCGTAGTTGATG  58 208
APT56_RS21035 NONE
APT56_RS21090 4763007 .. 4763034 +  -4.6  -2.62184   ATCGACGGCCTGACG        GCCGCGCTCGCC TGAT GCCGGCCGCCGC         TCCTGTCCGCCCCAC  43 11
APT56_RS21095 NONE
APT56_RS21100 NONE
APT56_RS21105 4765197 .. 4765207 +  -8.2  -3.95852   GATGGCCGCCGCCAG                 CGCC AGC GGCG                 TTTCATTCATCGGAT  70 111
APT56_RS21115 NONE
APT56_RS21135 4770062 .. 4770092 +  -9.1  -3.68222   GCCCAGCTCGCGCTG      GAACTTGG-CGATG GTGG CGTCGTCCAGGTTC       TTCTTCCAGTTGAAC  67 459
APT56_RS21145 4772573 .. 4772583 +  -8.2  -3.83568   CCGTGACGGCGGCGC                 GGCC CTC GGCC                 TTGTTGTCGGTCTGG  70 388
APT56_RS21160 4775804 .. 4775827 + -18.2  -2.71364   CCGTCCCCCAAAGCA          GAACGCCGCC CGAG GGCGGCGTTC           TGCTTGCGGCCATGG  87 90
APT56_RS21225 4792105 .. 4792131 + -10.1  -2.57132   CTCCGGCTTGAGCAT        CAGCGCGCGCGC CAGG GC-CACGCGCTG         CTTCTGGCCGCCCGA  55 335
APT56_RS21265 4799248 .. 4799263 +  -4.6  -3.21416   GCAAGGTCATCCGCT              GATGCG GCGC CGCACC               TTCCTGCTGGGCGTC  49 24
APT56_RS21270 NONE
APT56_RS21275 4802348 .. 4802360 +  -4.7  -3.88291   CCCGGCCGCGCCCGC                GGCCC CAG GCGCC                TTTCTCGGCCTGCTG  60 92
APT56_RS21280 4803055 .. 4803085 + -15.5  -3.04144   GCCGGCATGAAAAAA      CCCGGCGT-GATCC CGAG GGATCCGCGCCGGG       TCTTGCGCCTGGCGG  81 66
APT56_RS21300 4807490 .. 4807500 +  -4.6   -3.2614   CGGTCAGGGTCGGAA                 TGGC GGT GCCG                 TTGCTCTCCCAGGTC  49 151
APT56_RS21340 NONE
APT56_RS21345 4817474 .. 4817492 +  -5.3  -2.64155   CGATCGCGAGACCGC            CTGAGGCG GCGC CGC-TCAG             TCCATTTGCGCCAGC  43 22
APT56_RS21355 NONE
APT56_RS21360 4820175 .. 4820224 +  -7.8  -3.05384   CGGCCGGACTGACGC GGCGCGCGGCGGACAAGCGTCC CATCCAGA GGACGCT-G-CCGCCACGGGGC TTCGGTCCCGCCCAC  55 29
APT56_RS21365 4821379 .. 4821392 +  -5.3  -4.57073   AGTCCCAGCCATAAT               TGACA GCGC TGTCA                TTTTTGCAGACACTA  74 180
APT56_RS21370 NONE
APT56_RS21375 NONE
APT56_RS21380 NONE
APT56_RS21385 NONE
APT56_RS21390 NONE
APT56_RS21395 4828700 .. 4828712 +  -3.3  -2.78384   GGCGCGCGGGTCGAA                TCGCG CAG CACGA                TCTCGTACCCCAGGG  40 60
APT56_RS21430 4836785 .. 4836826 +  -7.8  -4.07568   AGCCAGCCCGCCGGC GCGCGCCGT-CCGGACGCG CCCAT CGCGGCAGGCACGCCACGC TTTTCCACGCGCCGC  71 100
        rpmB NONE
        rpmG 4837661 .. 4837679 +   -16  -5.27335   CGGAAAGCCGAAAAA             GGCCCTGC ATC GCAGGGCC             TTTTTCTTTGGCCGA 100 54
APT56_RS21445 4839042 .. 4839067 +  -3.8  -2.62616   AGGTTCGCAAGATGC         GCCCGCGCTG ATGAGC CTGTCCGGGC          TGCTGTCGCAGCTGC  41 15
APT56_RS21450 NONE
APT56_RS21455 4841704 .. 4841717 +  -2.3   -3.5764   GAACGGCGCTCAAGC               GTCTG CCTG CGGGC                TTTCCGGCTGGCATT  50 39
APT56_RS21480 4847093 .. 4847126 + -24.7  -5.00884   TATCCGGTCAAGCCG     GAAAGGGCCTGCCCC GCAT GGGGCGGGCCCTTTC      TTTTTTCGCGCCCAT 100 52
APT56_RS21485 NONE
APT56_RS21490 4849026 .. 4849070 + -11.2  -4.59773   CCTCCTATAATCAGG GGTTTTGGCCGCCCCCGCGC CTGGC GCGCGGGGGCGGTTCACCCA TTTTTCGCCATCGCG  93 43
        leuS NONE
APT56_RS21500 NONE
APT56_RS21505 4853485 .. 4853510 +  -8.1  -3.25823   CGCCGGCAACCGACC         GTGAAGGCGGC CCCG GCCGCCACCGC          TTCGTCTCCCCCGGC  57 22
APT56_RS21510 4854880 .. 4854914 +  -2.6   -3.1582   ACGCCTCTCCTTACC     ACCCTTAGTTCGCGGC GCT GCCGCGCGTTACCGGA     ATTTTCATGCACTCA  42 41
APT56_RS21515 NONE
APT56_RS21520 NONE
APT56_RS21525 4856792 .. 4856802 +  -2.4  -3.04263   TGGCCTCCCCGGCGG                 CCAG GCA CAGG                 TCTTCGCGATAGCGT  41 174
APT56_RS21540 4860977 .. 4860994 +  -5.5  -3.14564   ACGAAGCGCACGAAC             GGGGC GTAGATCA GCCCC              TTGATGGCGCCATCC  47 354
APT56_RS21550 4862398 .. 4862411 +  -5.9  -3.05816   ATGCAATCCTCGGGC               CTCGC TCCA GCGGG                TTCACTCGACCCTCG  49 51
APT56_RS21555 NONE
APT56_RS21560 4863324 .. 4863362 +  -7.5  -3.09516   CGATCGTCAGTTCGG  TATTCGGCGCTGGCGC CAACCCCT GCGCGA-CGCCGAGTA   TTCCGTGCTCCGGCA  52 145
APT56_RS21570 4864951 .. 4864964 +  -3.1  -3.06183   GGATGTAAGGCCGCA               TG-GCC GGC GGCACA               TTCCATCGCCGTCCG  43 33
APT56_RS21575 4865919 .. 4865942 +   -16  -4.91084   GGCCATAAAGAAAAA          CCCCGCAGGT ATCA GCCTGCGGGG           TTTTCTTCTTGAATA 100 110
APT56_RS21615 4874612 .. 4874638 +  -9.4  -2.65993   ATCGTCAGGCGACCT         TGCGAGCGAC GGGCGAG GCCGCTCGCA         TGCTGTCGGTCTCGT  56 81
APT56_RS21625 4877462 .. 4877472 +  -6.8  -2.87132   TTGTTATGCTGCCGC                 CTCG ATG CGAG                 TCTGTCGCCCCCAAG  49 205
APT56_RS21630 4880330 .. 4880347 +  -3.3  -3.44051   ATGGTGCGCTCGAAG             TTGCGGC GCAG GCTGCAC              TTCTGATCCTCGACC  49 437
APT56_RS21650 4882517 .. 4882569 +  -8.5  -3.38072   AGGTACATCTGCACG TC-CGCGATCTCGTCGGCCACG-TGC GCCC GCAATGTGGCCGGCG-GCTGGCGCGA TTCCTCTTCGGTCAG  59 183
APT56_RS21685 NONE
APT56_RS21690 NONE
APT56_RS21695 NONE
APT56_RS21700 NONE
APT56_RS21705 4892886 .. 4892898 +  -6.9  -3.64703   CCAGTTCGATGTCGT                GCCGC TGA GTGGC                TTTCGCTCCCCCAGC  57 508
APT56_RS21720 4893883 .. 4893902 +  -5.6  -3.16742   GAACACGGCTGAGCG            CCCGC-GCC AGC GGCGGCGGA            TTCCTCGCGGTTAAC  49 29
APT56_RS21730 NONE
APT56_RS21735 4896832 .. 4896876 + -12.8  -2.53263   GCAAGCGCAAGCACA GACT-TGGGGCTGGCAGCCGC GCTC GCGGCTGCCCCCGCCGCAGTC TCGCTTCGGCGTGCC  67 116
APT56_RS21740 4899706 .. 4899729 + -19.6  -4.54727   GGCCCCCCTGTGACA          CGGCCCCGGA GCGA TCCGGGGCCG           TTTTCATTTGGGGCG 100 54
APT56_RS21745 4900959 .. 4900975 +  -6.5  -3.76224   ATTGCCCGCCACATA              GTGGCTG CCG CAGGCAC              TTTCGTGAATCAAGG  61 478
APT56_RS21755 4902246 .. 4902261 +    -6  -4.14739   TTTCGGGATATCGTA              AGGGGC CCAG GCCCCA               TTTTCCCGTCCCTCA  66 144
APT56_RS21760 4903070 .. 4903085 +    -6  -3.95071   CGAGCTGGCATCGCT              GCCGCG CTAG CGCCGC               TTCTTTCGACGTTTC  64 16
APT56_RS21765 4904183 .. 4904195 + -10.5  -3.44051   GTCGGCCCGCACCGG                GGCCG CGC CGGCC                TTGTCCTCGTGCGCC  65 245
APT56_RS21780 4907554 .. 4907566 +  -6.2  -2.90075   TAGTACCTGCAACGG                CGCG CATTC CGCG                TGTCGTTGCAGACAG  47 227
APT56_RS21785 NONE
APT56_RS21790 NONE
APT56_RS21795 4909561 .. 4909579 +  -5.3  -3.61398   CGCGGTCAAGATGAT            GTAGCGCC GGAC GGC-CTAC             TTCTTGCGGAAGGGG  55 22
APT56_RS21805 4911246 .. 4911265 + -12.8  -5.08601   GCTTTCCCCACATGA            GGCGTCGC GTTC GCGGCGCC             TTTTTGTTGCCGTCG 100 53
APT56_RS21810 4911768 .. 4911793 +  -7.8  -3.62644   CGAAAATTCAGAAAC         TCTAAAGATA GATTAG TATCTTTAGA          TTCTCTAATTATCCC  63 67
APT56_RS21815 4912769 .. 4912801 + -10.5  -3.25823   TGCCTGAGCAGGTCG      CGGCTGTGCATGTCG ATA CAATAGGCGCAGCCG      TTGATCTGCGAGACC  63 345
APT56_RS21835 4916486 .. 4916513 + -21.4  -3.73224   GACTGGCGGAAACGA        CAACGGCGCACC CGAA GGTGCGCCGTTG         TTTCATGCGGGATCC 100 70
APT56_RS21865 4925187 .. 4925205 + -17.4  -3.32844   TTCTGAAAACAACAA             GGCCCCGG GAT CCGGGGCC             TTGTGCCGTGCGACG  93 35
APT56_RS21895 4931996 .. 4932049 +  -2.9  -4.42667   TTTACGCGCCCGATC CACCATAGCGTTCCGCAGTGTTGCCG TAC CGGATACCCGGCGCGG-GCTAGGGTG TTTTGCTGATTTTAC  66 75
APT56_RS21905 4935146 .. 4935168 +  -6.2  -3.36327   CCAGCACCAGCGTGA           CCGCGGCC ACGATCA GGTTGCGG           TTGTCGCTGAAGTCG  52 285
APT56_RS21915 4936888 .. 4936903 +  -4.6  -2.60075   GGCCAACGGCGGCGT              CTCGGC CACG GCCTAG               CTTCCTTCCCGCGGG  43 10
APT56_RS21920 4938389 .. 4938417 + -11.5  -3.07013   CGGGGGGCTCGCCCC        GTCCGGCCGCCGC CCC GCCGCGGGCGGCC        TGTCTTGAACCACTA  66 58
APT56_RS21925 NONE
APT56_RS21930 NONE
APT56_RS21935 NONE
APT56_RS21940 4942929 .. 4942950 +  -7.1  -2.87132   AGCTGCTGCCGCCCG           GCCTGCGCC CGCC GGCGCTCGC            TCTCTGCACCGCCGG  49 72
APT56_RS21965 4950649 .. 4950665 +  -7.9  -3.34715   ACAAGGCGTCCAGCT              GGGCTTG CGA CACGCCC              TCTTTCAGCGCGATC  55 292
APT56_RS21975 NONE
APT56_RS21980 NONE
APT56_RS21985 NONE
APT56_RS21990 4955252 .. 4955268 +  -6.5  -3.28924   GCTGGCGGCGGCGCG              CGCCC AGCATGC GGGCG              TTGTCCAGCAGCGTC  52 371
APT56_RS22050 4972124 .. 4972136 +  -3.3  -3.28791   AGAATGCCGATCTCC                AGCTC CAT GAGCG                TTATCGCGGAAACGT  47 395
APT56_RS22100 4980078 .. 4980093 +  -4.6  -3.73224   GCGCGGCGCGCCGGT              AGCGTC TCGG GACGCG               TTTGGTGACCAATAC  58 127
APT56_RS22105 4981585 .. 4981603 + -14.6   -5.1287   TCCGGCCACGAAAAA             GCCCGATC GTC GATCGGGC             TTTTTTACGTCTGGC 100 52
APT56_RS22115 4983370 .. 4983391 + -17.3  -5.60993   CTTGTCATGCAGCAA           GGCGCCTGC CGCG GCAGGCGCC            TTTTTTTGTGGCGGC 100 50
APT56_RS22140 4988785 .. 4988813 +  -2.9  -3.16399   CGACGCGCCCGCGCG        CGTCGCGTAAACC CCG GGTTGCCGCGCCA        ATTATTTTAGGTTTA  43 69
APT56_RS22145 4990141 .. 4990158 + -12.7  -6.11644   GTGGCGAAGACTGTG             CGCCCCT TTCG AGGGGCG              TTTTTTTTTGCGTGC 100 99
APT56_RS22150 4992444 .. 4992502 + -12.8  -2.88544   TTAGGGTTATCAGGA ACTAGCCGGGCCCGGGCCCTTGCCGTAC GCT GTGCGGCATTGGCCTGGTGCCGGCCCGC TGTATCCGCCTGCCC  69 45
APT56_RS22155 4993977 .. 4993991 +    -7  -3.01712   GCTTGCCCGTATTGA               CCGCCG CAC CGGCGA               TCTTCACCACCCAGC  52 463
APT56_RS22195 NONE
APT56_RS22200 NONE
APT56_RS22205 NONE
APT56_RS22210 NONE
APT56_RS22215 NONE
APT56_RS22220 NONE
APT56_RS22225 NONE
APT56_RS22230 5011509 .. 5011522 +  -2.3  -3.52204   TGCGGCCCGGCTCCT               GCACG CCCA CGTTC                TTCATTTCGCCGTGC  47 247
APT56_RS22270 NONE
APT56_RS22275 NONE
APT56_RS22280 NONE
APT56_RS22285 5022401 .. 5022423 +  -6.8  -2.71364   TGTCGAGCGTGAACG           CGGCGGCGGC GCG GCCGATGCGG           TCGTTGACCGCGTGC  46 71
APT56_RS22315 5027737 .. 5027759 + -17.7  -4.72272   GCGCGCAAAGAAAAA           GGCGGGCCC TTCGC GGGCCCGCC           TTTTTGCTGCCCGCC 100 49
APT56_RS22355 5037938 .. 5037967 +  -6.2  -3.16564   ATTGAGGCGAGGGGC       GGCGACCCGCGC CATATC GCGCTGGCCGCA        TTGCTGCGCTACGGC  49 36
APT56_RS22365 5040511 .. 5040533 + -16.3  -5.14563   CGGTAGTACGGCAAA           GGCCCCGCA GGTGA TGCGGGGCC           TTTTTTCATGCGGCG 100 70
APT56_RS22370 5041248 .. 5041261 +  -2.3  -3.85864   GCAACAACTGGTCGT               CCTCG ATGC CGAGC                TTCTTGTAGTGCTCG  56 252
APT56_RS22420 5048867 .. 5048916 + -13.6  -3.70149   GGTGGCCGACGACAG TTG-AGGCCGGTGCGCGGCGGCCG CGCG CGGCCGCT-TGCGCCGCCCTGCGA TTTCACTCATCTAGA  86 22
APT56_RS22425 NONE
APT56_RS22430 NONE
APT56_RS22435 5051613 .. 5051656 + -10.1  -3.14132   GGATGTCGGAAAAGC ATTCCTCCGCCGCCAGCGC CTGCTC GCGCCGGCGGCGGATCAGG TTGATCGGCGGCAAC  60 152
APT56_RS22445 NONE
APT56_RS22450 NONE
APT56_RS22455 5056425 .. 5056481 +  -3.5  -3.01712   ACACCATTTCATTGA TGGCGC-GGCAGGCGTCCATCAGGCG CCGCAT CGGCTGGTAGACCCAGGCCGGCACCA TGTTCGACGAGCACA  43 488
APT56_RS22475 NONE
APT56_RS22480 NONE
APT56_RS22485 5060563 .. 5060582 +  -9.2  -3.14564   CGCAGTCGCGGGCCA            TGCCGGAC TTTC GCCCGGCA             TTCCTGCAACGCTGC  60 278
APT56_RS22490 NONE
APT56_RS22495 5061864 .. 5061882 +    -3  -4.19238   CTGACGAAGCCCTGT             CCATGGTC CAG GAACACGG             TTTTGCCGTTGAAGA  61 232
APT56_RS22515 5065103 .. 5065127 + -11.3  -3.53012   GCCGCGCCGGCGGCG          CTGGCCGCCGG GGG CGGGCGGTCGG          TTTGCCGGACACGGG  72 213
APT56_RS22520 NONE
APT56_RS22525 5067469 .. 5067489 + -10.4  -2.52464   GCCTCGCCGATGTCG           CCGTCGCGC TGCA GCGCG-CGG            TGCATTGCCGGACGC  58 45
APT56_RS22545 5070102 .. 5070115 +  -3.7  -3.53224   GCTGGCCGCCTGAGC               CGCGC CGGC GAGCG                TTTCGCGGCGCGCTG  51 28
APT56_RS22550 5070606 .. 5070634 +  -3.7  -2.57211   CGCTCCCCGCGAGGA       GCGGCC-CGCCG AAGACG CGGCGTGGGGGC        ATTGTCCAACCGCCT  41 140
APT56_RS22555 NONE
APT56_RS22560 5071794 .. 5071808 +  -8.6  -2.54523   CATCAACCGTCCCCA               TGTTGC GAT GCAACA               TCCATTCAGGTGTAA  53 98
APT56_RS22565 NONE
APT56_RS22570 5075356 .. 5075375 + -12.8   -3.4285   AGGCCGTGAATGAGC            GGCGGGGC CCCG GCCCTGCC             TTGTCCCTTGCATCA  77 52
APT56_RS22575 NONE
APT56_RS22580 5077631 .. 5077656 +  -8.2  -3.14881   ACCAACAGCACCATG         CCGCGGTCGCG CAGCT CGCG-CCGCAG         TTCGTACAACGCTTC  56 295
APT56_RS22590 5080886 .. 5080905 +  -9.2  -4.25104   CCCCAAAAAGAAAAA            ACCGCTCC CAAA GGAGCGGC             TTTTCATCGAGCCAG  81 470
APT56_RS22610 5086083 .. 5086097 +  -2.7  -2.78679   CCCCGGGTCTCCGCC               CGGCC CCAAT GTCCG               CTTTCCGTCCGCCAC  40 90
APT56_RS22615 5087284 .. 5087315 +  -7.2  -4.82901   CCACAAACAGTGCCA      GGCCGAGCTC-ATGC GCG GCGTCGACCACGGCC      TTTTTGTCCAGCCCG  89 455
APT56_RS22640 5093352 .. 5093368 + -12.3  -3.53012   GGCGGCAATCGGAAA              GTCGCCA TCG TGGCGAC              TTTCCAGCGAGGACC  75 229
APT56_RS22650 5095890 .. 5095909 +   -15   -5.4505   GCCCCCCCAAAAAAA            TCCCGCCG GAGA CGGCGGGA             TTTTTTCTTGGGCGG 100 78
APT56_RS22690 5103257 .. 5103273 +  -3.7  -2.71364   CGTCGCCCAGGCCCG              GCATG ATGTAGC CATGC              TCGTTCAGGCCGTCG  40 131
APT56_RS22720 5109374 .. 5109396 +  -6.2  -5.00616   GACAGTTGCCCAGAG           CCGAGCCG ACAGGTC CGGCTCGC           TTTTTTGCCGCCGCC  87 165
APT56_RS22725 NONE
APT56_RS22730 5111692 .. 5111708 +  -3.6  -3.75678   CCGACCTAGTGAAAA              CCACGA GATCG TCGGGG              CTTTTTATTTGGCGA  54 60
APT56_RS22735 5112279 .. 5112310 +  -9.3  -4.42619   CCGCGGCAGCTGCCC      CGCCGCCCGCCGCG CCAGC CGCC-CGGGCGGCC      TTTTCTCCACTCTTA  83 76
APT56_RS22740 NONE
APT56_RS22745 5115232 .. 5115248 + -10.8  -5.71983   CCCTTTTTTGGAAAA              CCCGCC CGCGT GGCGGG              TTTTTTTATGCTTGG 100 48
APT56_RS22750 NONE
APT56_RS22755 5116785 .. 5116805 +   -14  -4.42238   TGCCGCCAATGAAAA            TGGCCGCC TGCAT GGCGGCCA            TTTTCATTGAACTCC 100 45
APT56_RS22765 NONE
APT56_RS22770 NONE
APT56_RS22775 5120744 .. 5120768 +  -4.1  -3.04398   AATGGCGGCCTGCAA          GGCGCAGATCG CGT CGGTTGGCCCC          ATTTTCGCGGGCCGC  45 80
APT56_RS22780 NONE
APT56_RS22785 5123861 .. 5123871 +  -2.4  -3.28712   GGCTATAGACGATGA                 CGCC GGT GCCG                 TTCTGCGCGCACCAC  45 523
APT56_RS22795 NONE
APT56_RS22800 5125204 .. 5125217 +  -8.1  -2.80398   CAGTAGTTGAGTACG               CCGCT GCGG AGCGG                TAGTTCAGTTGGTTA  52 79
APT56_RS22805 5125316 .. 5125331 +  -6.8  -4.84529   CAGTGCCTTTCAAGA              GCTCCG TCCC TGGAGC               TTTTTGCATTTATAG  84 54
APT56_RS22810 NONE
APT56_RS22815 5125657 .. 5125670 +  -8.1  -2.80398   CTGAAGTCCAGTAAG               CCGCT GCGG AGCGG                TAGTTCAGTTGGTTA  52 95
APT56_RS22820 5125827 .. 5125843 + -11.5  -5.37593   AGGCGCCCGCCAAAA              GCTCCGG ATT CCGGGGC              TTTTTTGCTTTGCGC 100 112
APT56_RS22825 5127668 .. 5127693 +  -5.9   -3.1706   CAAGCCGCCCCCTCG         GGCCGGCGGCG AGAT CCCCGCAAGCC          TTCCTGGAGTCCGTT  49 234
APT56_RS22830 5128720 .. 5128744 +  -3.3  -2.81464   CGCCCACCAGGACGT          GGCCGCATGCC GCT GACGCCCGGCC          TGTCCTACCTGCTGG  41 10
APT56_RS22835 5129845 .. 5129865 +  -8.1  -3.56643   CGACGCGGGGGTCGA            GCACGGCGG CCG CCGGCGAGC            TTTGCAGCGTGTCGG  60 260
APT56_RS22850 5132603 .. 5132618 + -11.8  -5.15969   GGCCCGCCAAAAGCC              GGCCGC GCGG GCGGCC               TTTTTTGGCTTACGC 100 322
APT56_RS22865 NONE
APT56_RS22870 NONE
APT56_RS22875 NONE
APT56_RS22880 NONE
APT56_RS22885 5141133 .. 5141158 +  -5.3  -3.15427   GACCTGCGTCACTGG         CTGGCGTAGCGC TCG GC-CGCCGCCAG         TTCCTCGGGCGTGTT  47 17
APT56_RS22905 NONE
APT56_RS22910 NONE
APT56_RS22915 NONE
APT56_RS22920 NONE
APT56_RS22925 5150264 .. 5150297 +  -4.5  -2.71712   CGCGTCCACACCGAT    C-CGC-GTGCCCGCG ACGGCG CGCGGGCGCAGCAAG     CTTTACCGCAGCAAA  42 49
APT56_RS22930 5152097 .. 5152134 + -11.3  -5.07652   CCGTCCGCCGCCCCC   GAAGGCGCGAAGCTGCTA CAT TGGCAGCC-CGCGCCTTG   TTTTCTTTTCCCCCC 100 68
APT56_RS22935 5153374 .. 5153393 + -16.4  -4.72272   TCGGGACATGCAGAA            GCCCGGCC CCCC GGCCGGGC             TTTTTCATGCCCGCC 100 59
APT56_RS22955 NONE
APT56_RS22960 5157111 .. 5157129 +    -3  -4.14598   GTGCCCCCGGGCTGG             TGCTGACG GCG CGTTCGCG             TTTCCTTTGATTGCG  60 20
APT56_RS22965 NONE
APT56_RS22970 5158434 .. 5158491 +  -2.5  -3.56099   CGTCGTCGATCACGA TGCGCAG-GCGGT-CGGGCGCGTCTGC CTGGGC GCCGATCCGCACGCGCCGCGCGGCCCA TTTACAGGCATTGTC  50 344
APT56_RS22990 NONE
APT56_RS22995 5162513 .. 5162548 + -23.3  -2.78596   CCGGGACGGATGCGC    GGACGGCGCGGCGCG AAAGTC CGCGCCGCGCCGTCG     TATGATGGAAGCCTG 100 68
APT56_RS23000 5163947 .. 5163990 +  -6.7  -3.05463   AGCGCGGAAAAACGG CGCAAGCGGGTCCATGCC ACGCAATTC GGTAACG-CCCGCTTGCG TTGCGTCAAACCCCT  51 59
APT56_RS23005 5164619 .. 5164635 +  -2.1  -4.07885   CGGGGCCGCCGCGCC              CGCCCCT ACA ATGGCCG              TTTTCCGACACCCTG  58 70
APT56_RS23010 5165462 .. 5165474 +  -4.7  -3.06796   AATGGCGGTCTTGAA                GCCCC CCT GGCGC                TTCGCTACCGTAGGC  47 121
APT56_RS23015 NONE
APT56_RS23020 5168838 .. 5168848 +  -8.2  -3.30771   TGTCCGTCATGGCGG                 GGGC CGA GCCC                 TTGTAGGGAATCTCC  59 386
APT56_RS23035 NONE
APT56_RS23040 5172073 .. 5172098 +  -5.3  -2.55544   CCACGCCTGACAGCG         GCCGCCGCGAAG GGC CTGCGCGA-GGC         TCGGTTGGATCGTCA  43 31
APT56_RS23045 5172569 .. 5172589 +  -2.4  -2.71924   CAAGGACGTCTGGCA            CGCCGCCA AACCC TGACCGCG            CTTTCGCCGCCCATC  38 10
APT56_RS23050 NONE
APT56_RS23055 5174128 .. 5174145 + -12.7  -4.07568   GATGTATGCCAAAAA             CGGCTGC CCGC GCAGCCG              TTTTAGGCGGGCCCC  89 208
APT56_RS23080 NONE
APT56_RS23085 NONE
APT56_RS23090 NONE
APT56_RS23095 NONE
APT56_RS23100 NONE
APT56_RS23105 5187056 .. 5187094 +  -7.9  -3.53012   GCCGTTCCCCGAGGG  CGGCCGCCGCGCCGCCCG CGCC CGAGCC-CGCGCCGCCCG   TTTCCGGCGGCGACG  60 51
APT56_RS23110 5189378 .. 5189390 +  -4.7  -2.57132   GCTCGTTCGAGCTGA                CGCTC CAG GCGCG                GTTCTGAGGACAGCC  43 6
APT56_RS23115 5190964 .. 5190988 +  -3.6  -3.28791   CGGCGGCAAGGACCC         GGCGGGAATGCA CTA TGC-T-CCTGCC         TTGTCCCCGCACCAT  45 48
APT56_RS23120 NONE
APT56_RS23125 5192718 .. 5192731 +  -3.7   -3.5394   GCCGCCGAGGCGCGC               GCGGC ATCG GCCAC                TTTCACCACGCCTTT  51 467
APT56_RS23135 5194649 .. 5194672 + -19.6  -3.53012   CAATGCGTATGCAAA          GACCGGCCGC CCGC GCGGCCGGTC           TTTGCGGGCAACGCA 100 187
APT56_RS23180 NONE
APT56_RS23185 5205172 .. 5205210 +  -5.9  -3.05384   CAGCCACGCCTGCAA  C-GGCGAGGCGTGCTGGCG GCG CGCCCACAC-CATCGCCAG  TTCCATGCGCCGCAG  48 94
APT56_RS23195 NONE
APT56_RS23200 5208199 .. 5208225 +  -7.9  -3.05715   GGCCGGATCAAGAAC        GGGC-GCGGCGG CTTC CCGCTGCTGCCA         TTCCATGGCAGCATT  55 45
APT56_RS23205 5209031 .. 5209048 +  -2.6  -2.70932   AAATCTGACAGCATG             GCTCTC TAAGAT GAGCGC              TCATTCAACCAGGAG  38 97
APT56_RS23210 NONE
APT56_RS23220 5212170 .. 5212182 +  -6.2  -3.32022   CTGGGCCACGAACAG                GCGC GGCAG GCGC                TTGATCTGTCCGGCC  52 385
APT56_RS23230 5214125 .. 5214139 +  -2.7  -2.73875   CCAGCAGGAACGGCA               CGCCG AACAC CAGCG               TCATCTTGAACACGC  39 226
APT56_RS23245 5217445 .. 5217463 +  -3.7  -2.70774   ACAGATGCCAGATGC             CGTGGGC ATGGC GCCAGCG             CTTGTCGTTGGCGTA  40 113
APT56_RS23260 5220262 .. 5220303 + -15.2  -3.14564   CTGCCCGACTGGGTT CTGT-CCCAGGTCGACACC CTGGC GGTGCCGGCCTGGGTGCAG TTGATGGCCGACTCG  80 83
APT56_RS23265 NONE
APT56_RS23270 5221983 .. 5221998 +  -2.5  -4.38712   TGCTTGCTGTCGCTA              TTGCC CATTTC GGCGA               TTTTCTGCCCCTGGC  65 284
APT56_RS23280 NONE
APT56_RS23285 NONE
APT56_RS23290 NONE
APT56_RS23295 NONE
APT56_RS23300 5227528 .. 5227545 + -12.7  -4.14598   GCGGGGACGACGGCG             CGGCCTG CCTT CAGGCCG              TTTGCTTTGATTGCC  89 245
APT56_RS23305 5227954 .. 5227980 + -10.8  -2.80016   ACATTCAATAATAAG         GGACATACCGCA ACC TGCGGTCCGTCC         TGATTCCTCATACAA  60 30
APT56_RS23310 NONE
APT56_RS23315 5230111 .. 5230125 +   -10   -3.5774   AGCAGCATTCCAGTC               TGCTGC TCC GCAGCA               TTTCCCACCTTCCAT  71 242
APT56_RS23320 5231040 .. 5231052 +  -4.1  -3.08464   CCCCACGTCGAATAA                TCTTG TCG CAGGA                TTGACTCAATAATGC  45 1
APT56_RS23325 NONE
APT56_RS23330 NONE
APT56_RS23335 5234033 .. 5234052 +   -15  -6.06723   TCCAATGACGACACA            CAGGCGCC GCGA GGCGCCTG             TTTTTTTTTGGAAGG 100 50
APT56_RS23340 5234588 .. 5234632 +  -4.1  -4.56597   GCGGGCGTGGCACTG GCGAGCTG-GCCCGGGCTGGC CTGAC GCC-GCCCGGACGCATCCCAC TTTTTCGCGCACGGC  71 2
APT56_RS23345 5235651 .. 5235661 +  -5.4  -3.65046   TCAGGCCGTTTTCCT                 TACC GTC GGTA                 TTCTTCAGGTAAAGC  54 303
APT56_RS23360 5238540 .. 5238576 + -11.6  -3.86202   ATCGCCTGCCGCCTG   TTGC-CGGCTG-CGTGGC ATC GCCACGACGGCCGTGCCA   TTTCCTCTGCTCCAC  79 115
APT56_RS23365 5239213 .. 5239231 + -13.1  -5.47218   CCTTGTTGTACCTTG             GCCGCCC CTGCC GGGCGGC             TTTTTTTGCGTCCGC 100 66
APT56_RS23370 5239853 .. 5239882 + -23.7  -4.27316   CCGCCAATAAAAAAA       CGCCCGCGTCATC ATGC GATGACGCGGGCG        TTTTACCTTGCGGCC 100 137
APT56_RS23380 5243272 .. 5243295 +  -6.6  -3.53012   TTCAGCCGCCACGGC          CGGGCCTGAGG CCG CC-CGCGCCCG          TTTCGGCACACCACG  57 17
APT56_RS23385 5244165 .. 5244185 +  -4.6  -3.47227   AAGACGCCGGGCCCC           GCCCGC-GC CTAC GCTGCGGCC            TTGTCCTGATTCCGG  53 75
APT56_RS23390 NONE
APT56_RS23395 5245950 .. 5245962 +  -6.9  -3.53343   AGGCCGCCTCGAAGC                GGCGC TGC GCGTC                TTTCCACAGGCGCTT  55 175
APT56_RS23405 5248165 .. 5248181 +  -7.9  -2.82516   CACCTTGCCACTGCG              GCGCGCA TGA TGCGCGA              TGTGCTCCTGCAGCG  49 333
APT56_RS23415 NONE
APT56_RS23420 5250099 .. 5250132 +  -7.3  -3.14132   AAGGCCTGGCCGGGT     AGGCGCCCGCGCGG GGTCAGG CCGC-CAGGCGCCG     TTCGTCGACGAAGCC  55 24
APT56_RS23440 5253407 .. 5253424 +  -5.5  -3.53012   TAATCCGGCTATTTC             CCGCC TTTCGGGC GGCGG              TTTCCCGCCGGCGCC  55 83
APT56_RS23445 5253811 .. 5253830 + -16.4  -3.30635   CTGAGCGGCCCTTTG            CGCCCGGC GCCC GCCGGGCG             TTCTACAGCGGTTTG  90 37
APT56_RS23460 5256631 .. 5256660 +  -4.9  -2.52464   GTTCGCGCCGGACAG       GGACGGCGG TAGACTGGATGT CCGCCGACC        TCCGTTGCCCCGCCG  43 60
APT56_RS23465 NONE
APT56_RS23470 5258143 .. 5258161 +  -2.4  -4.11484   CGGCGGCCAGCGCGC            GG-GCCT ACTATC AGGCACC             TTTTCCGCCCTTGGG  58 131
APT56_RS23475 NONE
APT56_RS23480 NONE
APT56_RS23485 NONE
APT56_RS23490 5261327 .. 5261353 + -15.2  -3.05463   CACGATGCGGGTGGC         CTCGCCGACATC GGG GATGTCGGCGAA         TTCACTGCGCAAGGT  74 480
APT56_RS23500 5262562 .. 5262573 +  -2.2  -3.73224   CGTCGGGATGCGGCT                TGCT GCGC GGCA                 TTTCGTGGCCGCTGA  53 290
APT56_RS23510 NONE
APT56_RS23515 NONE
APT56_RS23520 NONE
APT56_RS23525 5268487 .. 5268538 + -18.1  -2.66964   GTCGTGAACAGCATC GCCGTGGCGCGCG-GGCGT-TCGGT GTTG ACCGACACGCCATGCACGTCGCGGC TGGTGTAGTACGTGC  77 340
APT56_RS23550 5275210 .. 5275227 +  -6.9  -4.02108   TGACCACCTGGATTT             CGGCGTT GATC ATCGCCG              TTTCCTTCTGCTGGC  66 254
APT56_RS23560 5276803 .. 5276854 + -13.6  -3.01712   GCGGCCTCGAAACGA TCGACCAGGCCGCGCATGTCCGCCA GGA TGGCGCGCGTGCGCG-CCGCGCCGA TCTTGCCCAGCGCCA  69 216
APT56_RS23570 NONE
APT56_RS23575 5279287 .. 5279323 +  -5.9  -3.14132   GAACGCCACCAGCGA  GGA-CAGCGC-CGAGCAG AACG CGGC-CGCGCGCTGGTCC   TTCATGCGCCGCACC  50 423
APT56_RS23585 5281055 .. 5281083 + -13.8  -3.13164   AAGACGCGGCGCCAC       GCGGCG-GCGCGG CGGA CCGGGCGCGCCGC        TTCAGTCCTTGGGAC  76 59
APT56_RS23595 5282750 .. 5282764 + -12.8  -4.87626   CGCCTTCGGCTTGCT               GCCCCC CGA GGGGGC               TTTTTCATCTTGAGG 100 59
APT56_RS23605 NONE
APT56_RS23610 5285338 .. 5285387 +  -5.5  -3.01712   TAAGGCAGGCAACGC GGCGTCCCGGCGCGCTGC-CTCCT GAC AGGAGCGTACCGTGCCGTCCCGAC TATTCCGCGCCGCCA  48 41
APT56_RS23615 5286363 .. 5286376 +  -9.5  -4.46404   CGATGTTCTCCAGCC               GCGCC ACCA GGCGC                TTTTCCTCTTCCTTG  84 411
APT56_RS23625 NONE
APT56_RS23630 NONE
APT56_RS23635 5289749 .. 5289776 + -16.2  -4.09685   GCGGTTCCGCGCCAC        GCCTGCCGCGCC CTCG GGCGCGGCGGTC         TTTTCCAGGATCAGG  95 108
APT56_RS23650 NONE
APT56_RS23655 NONE
APT56_RS23660 NONE
APT56_RS23665 5295948 .. 5295994 +    -8  -3.02263   CACCCCCCGCAATCC CCGCAG-CGCAACCAC-CCTGG CCGTC CTGGGCGTGGTTGCGGCCGCGC TGTTCGCGGGCCTGT  54 80
APT56_RS23670 5296967 .. 5296977 +  -3.2  -4.11216   TCTTCCGCCCTTCAC                 CTCT CTA GGAG                 TTTTCCCGATGAAAA  60 300
APT56_RS23675 5298213 .. 5298241 + -23.2  -5.50499   CGCATCGCCTTCGAA        GCGCCGCCAGGG CATTC CCCTGGCGGCGC        TTTTTTTGCATGTCC 100 71
APT56_RS23680 5299936 .. 5299954 +  -5.8  -3.14132   GCAGATGCAGGGGCG             CCGTCGGC GCC GCCGCCAG             TTCATCGAGCAGCGC  50 372
APT56_RS23690 NONE
APT56_RS23695 5303592 .. 5303635 +  -6.7  -3.14132   ATGGCGGCCAGGCGC TGCGGCGTGCCGGCCGCCGGCC ACA GGCCG-CGTTCG--ACGCCCCA TTGCTCGCCCAGCCA  50 385
APT56_RS23705 5305083 .. 5305105 +    -9  -3.31248   GTTCGGCTTCGGCCA           GCTGGCGCAG GGC CAGCGCCACC           TTGTCGGCGATCTTG  59 112
APT56_RS23715 5306023 .. 5306037 +  -4.2  -2.70932   CTGGGGCGCCTGCAG               GCCG GGTGAAA CGGC               TAGTTCCCGGGCGGC  42 17
APT56_RS23725 NONE
APT56_RS23730 5309724 .. 5309739 +    -6  -3.02511   GTCACGGTGAAGGTG              CAGGCG TTGG CGCCGG               TGTTGAGGAACTCGG  48 268
APT56_RS23745 5314441 .. 5314457 + -12.3  -3.05384   AGGCTCTCGACCGCG              CGCATCG CGT CGATGCG              TTCGGTGCACAGGCC  66 500
APT56_RS23765 5322789 .. 5322805 +  -8.7  -3.54109   CGGACGACAGTTCGA              CGTCGAC GCT GTCGATG              TTCTCCTTCAATTGC  63 166
APT56_RS23780 NONE
APT56_RS23785 NONE
APT56_RS23790 5326802 .. 5326822 +  -6.7  -4.07687   GCGGCCAGAGCTTCC            AGCGGCCGA TTG TCGGCCGGG            TTTTCCGCCAGGACT  66 333
APT56_RS23800 5328834 .. 5328873 +  -4.4  -3.03124   CGTCAGGAAGATGCT GAAC-T-CGCCGCGGC-TG AGCAG CATGGCGCGGCGGAAGTTC TCTTCCAGCATCGGG  43 211
APT56_RS23820 5334287 .. 5334305 +  -3.9  -2.75826   CCGATCAGGGCTTGC            GC-AACAC ATAA GTGTTTGC             TAATGTGTTGCCATG  42 69
APT56_RS23825 NONE
APT56_RS23830 NONE
APT56_RS23835 NONE
APT56_RS23850 5339585 .. 5339597 +  -6.3  -3.31792   GCCATACCAGGAATA                GAACT CGA AGTTC                TTCTGGCCCTGCTCC  52 301
APT56_RS23865 5344157 .. 5344195 +  -8.7  -3.07895   GCGGCAACAGCGTCA  CCTGCGCGC-GCGGCGCC AGGC GGCGCAACCGTTCGCAGG   TCTCTTGCGAATCGA  55 194
APT56_RS23885 5347383 .. 5347432 +  -7.6  -3.29144   AGTCGGCGTAGCCCG GATTGCGCCGGTCCAGCCGGCGC AGCAG GC-CCGGCCAGGCCAGCGCGGCC TTGTGGGCGCGGTCG  57 115
APT56_RS23925 NONE
APT56_RS23930 5355774 .. 5355805 + -12.8  -3.55563   GCCTGCGAATGAGGC      CGCCGGCCGCCCCG TTCA CGGGACGGCCTGGG       TTTCCACCGTCAGGT  78 29
APT56_RS23945 NONE
APT56_RS23950 NONE
APT56_RS23955 5362382 .. 5362409 +  -2.7  -3.06671   AGCCAGAACGCCGGC       CA-AC-TGCGCGG CACG CCGCGCACGGATG        TCTTCGGATGCATGT  41 209
APT56_RS23980 NONE
APT56_RS23985 NONE
APT56_RS23990 5369984 .. 5369996 +  -4.7  -2.87132   AGCCGGTCATCGACG                CGGAG GGC CGCCG                TGTCTGACACCGCCG  45 6
APT56_RS23995 5370887 .. 5370903 + -10.1  -3.96841   GCTTGTCCAGTTCGC              CGGCTTG CGG CAGGCCG              TTGTATTTCTTCAGG  75 191
APT56_RS24010 NONE
APT56_RS24015 NONE
APT56_RS24020 5374386 .. 5374411 +  -3.1  -3.70902   CCAGCATCACCGGTC         G-CAGCGCTGGG GCA CCTTGCGCGGGC         TTTCCGTGTAGCCCA  54 56
APT56_RS24090 NONE
APT56_RS24095 5389536 .. 5389549 +  -3.1  -2.70932   CTACCGCAAGAAGGC               CGGTCT ATG AG-CCG               TCGTTCGCCGGCCCC  40 16
APT56_RS24100 NONE
APT56_RS24105 NONE
APT56_RS24110 NONE
APT56_RS24115 5392381 .. 5392421 +  -8.7  -3.13403   TCCAGTAACCCCCGT  GGCCGCGCACGGTGCCACG ATG CGACGCGCCTTGGGCGCCC  TGTTGCTGGCCGGCG  57 33
APT56_RS24120 5394070 .. 5394087 + -14.1  -2.50016   GTTGACCGCCGCGCC             GCGCGCC TGCA GGCGCGC              CTGTTCCTCGTGGAA  65 319
APT56_RS24140 NONE
APT56_RS24145 5398924 .. 5398950 +  -2.8  -4.07568   ATGCGGGCGAGCGCC         GCGCGCGGCT CCCCCTC GGCCACGGGC         TTTTCCGCGAGCCAC  58 150
APT56_RS24155 5401253 .. 5401281 +  -6.5  -3.54424   CTGAACAACCCCGAG        GCCACCTCCGCGT GCA GCGCGAACGCGGC        TTTCACGCCGTCGAG  57 184
APT56_RS24195 5408734 .. 5408774 + -12.5  -2.59431   TCGGCCTTGATCTCC  CGCTTGTCTCCGTCCCGCT CGA AGCGGAACGGAAATGCGCG  TCCGTTCTGCGGGGA  62 381
APT56_RS24205 NONE
APT56_RS24230 5417973 .. 5417989 +  -7.9  -4.27316   CCCGCTGCCCGCTAT              CCCGGCA GCT TGCCGAG              TTTTCCCTTGGCGCG  75 88
APT56_RS24245 5420732 .. 5420755 +  -3.2  -4.66163   TTCATTCACTCTGGT          TGCTATGGTTC ATT GAA-CATGGCG          TTTTTGCCTGAAAGT  72 355
APT56_RS24250 NONE
APT56_RS24255 5422759 .. 5422774 +  -3.2  -3.29144   CGCAAGAAACATCAA              GGCG-CC GCA GGATGCC              TTCTACGGCGACTAC  45 204
APT56_RS24260 NONE
       groEL 5425073 .. 5425107 + -12.8  -5.04385   GGAACGCAGTACCCC     GAAAACCCCCCGGACC TTC GCCCCGGGGGTTTTTC     TTTTTTGGGCCTATC 100 80
APT56_RS24270 5426365 .. 5426386 +  -2.2  -4.18018   GTCACTCGCTGCGCT           GGACGCGAG CCTTT CCCGC-TCC           TTTTCCCTCACGGCG  58 57
APT56_RS24280 NONE
APT56_RS24285 NONE
APT56_RS24290 NONE
APT56_RS24295 NONE
APT56_RS24300 NONE
APT56_RS24305 NONE
APT56_RS24310 NONE
APT56_RS24315 NONE
APT56_RS24320 NONE
APT56_RS24325 5436823 .. 5436862 +    -7   -4.4261   CAACAGTCTGGCCAG  GGGCGCG-GCCAGCGGATC CTC GATCGGATAGCGCGCGCCG  TTTTCGTCTTCGCCC  79 369
APT56_RS24335 5438827 .. 5438840 +  -5.9  -2.78463   AGGCTTGCCCGTCCA               GGGGC CCGC GCCTC                TATACTGGGAGCCAT  46 52
APT56_RS24340 NONE
        pyrF 5441296 .. 5441332 +  -7.3  -3.53012   GTGGACACCGCCACC   TGCGCCGCCGGCGATGC CAGCA GCA-CGCCGTTGGC-CA   TTTCCAGCGCCACCG  58 321
APT56_RS24380 NONE
APT56_RS24385 5447590 .. 5447602 +  -6.9  -3.77906   GGGACTTTCCCGAGT                GTGCC CCT GGCGC                TTGTATGTTTGAATT  62 170
APT56_RS24390 NONE
APT56_RS24395 NONE
APT56_RS24400 NONE
APT56_RS24405 5451190 .. 5451207 + -14.1  -5.76949   CGACGTTCCTTTGCG             CCGCCCG GCAA CGGGCGG              TTTTTTTTGGCCGTC 100 53
APT56_RS24410 5453214 .. 5453257 + -35.5  -4.07568   TGCGACCGCCGCAAA CACCGCGCCCCACGCCTGC GATGCA GCAGGCGTGGGGCGCGGTG TTTTCAGCGCCGGGC 100 69
APT56_RS24420 NONE
APT56_RS24425 5455893 .. 5455925 + -10.4  -4.07568   CCGGCTCACCGAACC      CTCCCGGAGGGCGC CTTGC GCGCCCTCCCTGCG      TTTTGGCGCCCGCGA  79 54
APT56_RS24430 NONE
APT56_RS24435 5457977 .. 5457990 +  -9.5  -3.28712   CTCATTTGCCCAGCA               GGCCC TTCA GGGCC                TTGTCCACCGCCGCG  62 493
APT56_RS24450 NONE
APT56_RS24455 5462986 .. 5463003 +  -7.1   -4.0098   TTATTGAATAACATT             CAATCAA TCCA TTGATTG              TTATTTCGCTTGCCG  67 161
APT56_RS24460 5463682 .. 5463702 +  -5.3  -3.16881   CGGCCAGTCTCCACC            CGCCCCC GTTCGCA GGGGGAG            TTCCTGGCATCCCTG  47 183
APT56_RS24465 5465490 .. 5465504 +  -2.7  -3.08679   TGCGTGGGCCAACCC               GGCCG ACTTC CGGCA               TATTCCCTGGCAGCC  42 133
APT56_RS24470 5467880 .. 5467923 + -21.8  -2.55351   CAGGCGAAGTTCTAA ATGGAAGGGGCAGGCCCTTG ATGC CAAGGGCCTGCCCCATTCAC ATTCATGTAGCGCGA 100 26
APT56_RS24525 5478848 .. 5478880 + -11.8  -3.54424   GCGGCCTGAAAGGTT      CCCCTCCGGGCCGC CCTGC GCGGCCCGGCGGCA      TTTGGACACCTCCGG  75 76
APT56_RS24530 NONE
APT56_RS24535 NONE
APT56_RS24540 5482137 .. 5482157 +    -9  -4.56775   GCGCAGGCCGAATGG           CTGCGCGGC GCTC GCCGC-CAG            TTTTTCGGGCACGGT  83 144
APT56_RS24550 5484390 .. 5484426 + -18.8  -3.99805   TCTCCCGTCACGCCC   GCC-CACGGCGATGCGC GCAA GCGCATCGCCGTTTGGC    TTTGGATTTTTCCGG 100 49
APT56_RS24555 5485813 .. 5485866 + -20.3  -2.73364   GGTGTAAGCGCGGTC CGTCAGGATCGGGGCGT-GGCGGCCG CAT CGGCCATCAACGCCTCGATCTCGGCG TCCTTGGCCTGCCAC  93 34
APT56_RS24575 NONE
APT56_RS24580 NONE
APT56_RS24585 5492805 .. 5492855 +  -7.5  -4.08216   TCTACCCATGACCCG GATGTCGCGGCGG-GGGGCCGGG CGCATGC CCCGGCTGCGCCGCTG-GACGCC TTTTCCCGCGGCTGC  71 62
APT56_RS24590 NONE
APT56_RS24595 5494626 .. 5494644 +  -6.6  -3.05384   ATTGAAAGGACGCGG             CGGGCGAG GCG CTCGGTCG             TTGCGTCCGCCCCCG  48 36
APT56_RS24625 NONE
APT56_RS24630 5503043 .. 5503066 +  -8.8  -2.90496   ATGGACAGGACGCCA          TGACGGGCGA ATAA TGGCCCGTCG           TCCTTTCCCGGAGCG  55 59
APT56_RS24635 5504752 .. 5504783 + -10.8  -2.79183   GCCGCGATGGCGCCG      CGCTGGGCGGCTGA GGCC TCAGGCGCTGAGCG       TGTCGTACAGCTCGA  60 12
APT56_RS24690 5518229 .. 5518242 +  -2.4  -3.49475   GTTGCCGGCGCCACT               TCAG CCTTTT CTGA                TTCTGTACCCATGAA  47 50
        thyA 5519569 .. 5519582 +  -5.2  -2.89564   TTGATTTGAATTGAG               GCCG GCGCGG CGGC                TGTATGCGCTCAGGA  45 370
APT56_RS24700 NONE
APT56_RS24705 5522361 .. 5522390 +  -4.9  -2.72344   GCGGGCGCCGCGCCC       GGCCGCGGC GACAGGCCCTAG GCCGCGCCC        TCGTTGCGCATGAAG  44 83
APT56_RS24715 5525328 .. 5525360 + -12.5  -4.07568   GCCGCGCATCGCACA      CAATGGCGGGCGGCC CCG GGCCGCCCTCCGGCG      TTTTCAAAGAACCCC  85 60
APT56_RS24720 5526902 .. 5526925 + -12.4  -4.07568   ATCCTGCCCACACCG          CCCCGGCC CGCCAAGA GGCCGGGG           TTTTGCCGAAAGACA  85 40
APT56_RS24725 NONE
APT56_RS24730 5530111 .. 5530123 +  -3.4  -2.70932   ATGTGAAAAAAGCCC                CTTG ACGGG CAAG                TAGTTCAGGGGGAAA  40 21
APT56_RS24735 NONE
APT56_RS24740 NONE
APT56_RS24745 NONE
APT56_RS24750 NONE
APT56_RS24755 5536684 .. 5536705 + -18.7  -4.20806   TTTGTCGACAATATG           GCCGGCGCC CGAG GGCGCCGGC            TTTCATTTTGAAATC 100 48
APT56_RS24760 5538864 .. 5538883 + -13.6  -5.83822   CGAGCAAAAGCAAAA            CCCCCATC GTGC GATGGGGG             TTTTTTTTGCCTGTC 100 47
APT56_RS24805 5550754 .. 5550794 +   -19  -3.28712   CGGCGCGCGCGCCGC GCCGGCGCAGCCCGA-GCT GATC GGCCTTGGGCCGCGCCGGC  TTGTCACGCAGGCGC  89 246
APT56_RS24815 5552917 .. 5552944 +   -15  -3.53012   TTGCCGCCCCGGTCG        GCGTACGAGGTCT CGC AGACCTCGT-CGC        TTTCCAGGAACAGCA  82 133
APT56_RS24840 5560810 .. 5560847 + -16.9  -3.00704   CGGCTCGCTGTTCCC   CAACCCGCCTGGCGCCC GCGT GCGCGACCGGCGGGTTG    TGTCGTTTCAAGGGT  85 107
        metG 5563041 .. 5563058 + -14.1  -5.14563   GCGCCATGCGAAAAA             GCCCGCC GATC GGCGGGC              TTTTTTCATGCGGCG 100 50
APT56_RS24865 5567039 .. 5567057 + -10.2  -3.57144   GGCGCTTCGGCGCGG             CCGTCGGC GCT GGCGACGG             TTTCGGCATGACCGG  67 133
APT56_RS24875 5568779 .. 5568795 +    -3  -3.73088   CGCCGCGACACGGTG             GAT-GCG AACG CGCCATC              TTATTGATACGCTAT  54 2
APT56_RS24880 5570587 .. 5570597 +  -8.2  -3.66732   CGTTGCCACCCATCG                 CCGC GGC GCGG                 TTCTTCAAGTCGTTG  63 175
APT56_RS24900 5572180 .. 5572210 + -21.9  -2.58544   TAGCGCCTCAACCGG      GCGG-CGCGCCGCG CATG CGCGGCGCGCCCGC       ATTCTCGGCATACCA 100 38
APT56_RS24915 NONE
APT56_RS24920 NONE
APT56_RS24925 NONE
APT56_RS24930 NONE
APT56_RS24935 NONE
APT56_RS24940 NONE
APT56_RS24945 5584016 .. 5584039 + -16.8  -5.93809   GGCGGCAGGATCAGG          CAGCACAGCG GTCC CGCTGTGCTG           TTTTTTTTGTAACGG 100 121
APT56_RS24950 NONE
APT56_RS24955 5586754 .. 5586774 +  -6.1  -3.19602   CCCTGCCCTCCTGGC            GCAGCCG GCTGCTG TGGCTGC            TGTTGATCTGGGCCG  51 56
APT56_RS24960 5588491 .. 5588530 +  -7.9  -3.33696   AACCGCAACCCATGC CGTGACCG-CCACGGG-TGC TGC GCGGCTCGTGGGCGG-CGCG TTCGTTGGCGGCGCG  55 218
APT56_RS25000 NONE
APT56_RS25005 NONE
APT56_RS25010 NONE
APT56_RS25015 5601139 .. 5601153 +    -7  -3.59262   CACATGCGTGAACTG               CAGGCC AGC GGCCCG               TTTGAACATCTCGCC  60 506
APT56_RS25070 NONE
APT56_RS25075 NONE
APT56_RS25085 NONE
APT56_RS25090 5618771 .. 5618785 +  -4.2  -3.86252   GCACGACCAGGCAAA               GGCATC CGC GATGCG               TTCTCTTTCCTCCCC  58 180
APT56_RS25095 NONE
APT56_RS25100 5620116 .. 5620146 + -15.3  -2.71144   TCCCTGAGCGCCCTG       GCCGGCGGCCACG CCCAA CGCGGCCGCCGGA       TCGTTCGCCAGCCTG  70 34
APT56_RS25115 NONE
APT56_RS25120 NONE
APT56_RS25125 5625368 .. 5625406 + -14.5  -3.28712   GCGGCCGCCGCCGAC   GGGCGCGGGCTGCGGTA TTCTC TGCCGCAGCCCCTTCCC   TTCTCGACGGAACCG  83 94
APT56_RS25130 5627389 .. 5627426 + -17.8  -3.17219   CTGACCCCGGCCGGC  GCGG-CGCGCCGGCCG-GC ATC GCGCGGCCGG-GCGGCCGC  TTACTGGGCCTTGTC  88 37
APT56_RS25160 5634668 .. 5634689 +  -3.6  -3.57561   TAGCCCGCCAGTCGA           CCCG-GGCG GTCAA CGCCACGCG           TTTCCGCCGTTCACC  51 38
APT56_RS25165 5635448 .. 5635496 +  -7.2  -3.20307   TGCTCCGCCCCCGCC GCGC-GGGCACGCAGTTGGCCGC AGCC GCCGTCCACATCCTGCCCGGCGC TGTTCCTGATCTTGG  53 133
APT56_RS25190 5639961 .. 5639997 + -10.2  -2.82161   TCGGCCTCGGCGCCC   TGC--TCGGCCGCCTTCT GGC GGAAGGCGGCCGTCTGCA   TGATCTTCTGGATTT  56 391
APT56_RS25220 5645138 .. 5645154 +  -6.5  -2.62184   TCTGGGACCTGATCT              TCAAGCG AGT CGCCTGA              TGCTCTACCCCGCGA  47 9
APT56_RS25225 NONE
APT56_RS25230 5646345 .. 5646364 + -13.6  -5.55664   TCGCCACCCGCGGAA            GGGCTGCA GCAA TGCAGCCC             TTTTTTTCATCATCC 100 62
APT56_RS25235 5647126 .. 5647148 + -19.2  -5.52384   CCTGCCGCGATGATT           TGGCCAGGCG CAA CGCCTGGCCA           TTTTTTTGGTGGAAA 100 95
APT56_RS25245 NONE
APT56_RS25250 5650050 .. 5650070 +  -9.7  -3.74693   CACGCACGGCATAAT            GCACGTTGG ATA CCAACCTGC            TTTCCTCCCATGCCC  71 214
APT56_RS25255 NONE
APT56_RS25260 5651379 .. 5651391 +  -7.7  -3.15056   CAGAAGCGGCCAACA                CTGTC CAC GACAG                TATTGGCTTCACGGT  55 107
APT56_RS25295 5660043 .. 5660080 + -10.5  -3.21912   CCAGTTCGCGCAGCG   CCTCGAAGCGCTGG-CGC TCC GCGTCCAGCACGTCCAGG   TTGGTGCGTTCGCCG  60 309
APT56_RS25340 NONE
APT56_RS25345 NONE
APT56_RS25350 NONE
APT56_RS25355 5676026 .. 5676051 + -20.5   -2.9583   CGCTGCCGCAATGAC         GAAGGGCGCCC ACGT GGGCGCCCTTC          TGCTTTGGGTCGTTG 100 52
APT56_RS25360 NONE
APT56_RS25365 NONE
APT56_RS25370 NONE
APT56_RS25375 5682068 .. 5682087 +  -9.2  -2.70932   CTCAGCAGCCCTGCA            CCGCCAGC TTGC GCTGGCGC             TGGTTGGCGGCGCGC  56 73
APT56_RS25405 5689494 .. 5689520 + -20.8  -3.07575   AAAGAAGTAAGTACG         CGGGCCGGCGCG CCC CGCGCCGGCCCC         TTGCCTGACAATTTT 100 31
APT56_RS25410 5689740 .. 5689756 +  -3.5  -4.28762   AGATTTCGCAGTACA              AGCCCCG CAC CGGGGGA              TTTTCCTAAAATTGT  64 74
APT56_RS25415 NONE
APT56_RS25420 5691663 .. 5691688 + -11.2  -5.02357   AGCTCCAAAACGAAA         GGCCTTTCAC CAATGA GTGAAGGGCC          TTTTCTTTGGTTCTG 100 47
APT56_RS25435 5699977 .. 5699995 +  -4.4  -3.14944   CGGGTTGCCTGATAA             CGGCTCGC GCC GCGAAACG             TTCAATATCGTGCTG  45 393
APT56_RS25445 5700881 .. 5700895 +  -4.3  -3.75629   TCGCGCGTGGTCGCC               GTAGT CGGAA ACTAC               TTTGCATTAACCGTA  56 22
APT56_RS25450 NONE
APT56_RS25455 NONE
APT56_RS25460 NONE
APT56_RS25465 5703656 .. 5703676 +   -14  -5.04601   TGTTGCGTCCGCATC            GGCCTCGC CATCA GCGAGGCC            TTTTTCATTTATGGC 100 47
APT56_RS25470 5704501 .. 5704535 +  -3.7  -3.56092   CTGACGCATTAGCAC    TCCCAAA-GTCTTCGT CATG ACGAAGAGATTTAGGA     TTTGGGGACTAGTGC  53 6
APT56_RS25485 5711188 .. 5711204 +  -3.5  -3.70076   TATCGAAATGGTTAC              GCGCCGG GGG CAGGCGG              TTTCAGTGGATTTCC  54 463
APT56_RS25495 5712438 .. 5712456 + -13.1  -4.63218   ATCCGACAGGACGAA             CGGGCGC GCAGA GCGCCCG             TTTTCTTGGGCGCCC 100 48
APT56_RS25500 5712920 .. 5712946 +   -23  -5.47218   CGTCAGGTCAAGGGA         CCGTCGCCGGCG CAA CGCCGGCGGCGG         TTTTTTTACGTCCAG 100 51
APT56_RS25530 5720270 .. 5720285 +  -3.9  -3.85698   CCCTGCAACTGAAGG              GCGGC CGGGAC GTCGC               TTTCTGAACCAAGGC  58 3
APT56_RS25535 NONE
APT56_RS25540 5722531 .. 5722559 + -12.3  -2.71144   GCAGCGCCTCGACCA        GGCGCTCGGCCGG CTC CTGGCTGGCCGCC        TCGTTGCGCGCGATC  63 158
APT56_RS25610 5735625 .. 5735645 +  -3.2  -3.18681   AGCGTGGGCAGCATC           GCGGCATCG ATCA CG-TGGCGC            TTGATGGGATTGGGC  45 322
APT56_RS25635 5739422 .. 5739458 + -10.8  -3.36327   GGCGAGCGCGATGAT   GGCCA-GCGCGGCGACGG CAT CCGCCGCC-CGCATGCCC   TTGTCCATCAGGTAG  66 520
APT56_RS25650 5742481 .. 5742496 +  -5.4  -3.73402   CGCCCGCCAAAAAAA              TACGGC ACGC GTCGTA               TTTGCTACGGAATCT  58 61
APT56_RS25655 5743446 .. 5743466 +  -5.3  -3.84451   TGGCGCAACCCGTGG            GCGCCGC ATCATGA GCGCCGC            TTTGCGTTTGCGAAC  60 209
APT56_RS25660 NONE
APT56_RS25665 5749745 .. 5749783 +  -7.3  -3.55622   TGATGAGCTTCAGGC  CG-GGCAGCCGGTCCGCG ATGG CGCGGATCTGCTCCAGCG   TTTCCGGCGCTTCCA  60 340
APT56_RS25675 5751440 .. 5751477 +  -8.3  -2.52623   ACTCGTGCACCGCGA   TGGCG-CCGCGCTTCCAG TAG CTGGCGGCGCGGATGCGG   CTCTTGTCGACGCCA  51 128
APT56_RS25700 5757122 .. 5757164 + -10.5  -3.57144   AAATGGAACACATAG CCCGGACCGCTGCCGGTCAC GGCG GTGACCG-CGTCGATCAGGG TTTCGCGCTCGACCC  67 307
APT56_RS25715 NONE
APT56_RS25720 NONE
APT56_RS25725 NONE
APT56_RS25730 NONE
APT56_RS25735 5765431 .. 5765464 + -10.1  -3.06796   CAGGCGATTCGGAAA     GGACTGGGCGCGATC GATC GACGGCGCCCGGCCC      TTACCTCGAATACGC  63 43
APT56_RS25760 NONE
APT56_RS25765 NONE
APT56_RS25770 5776267 .. 5776292 + -17.5  -3.06302   CCGTGATGCCCGGCA         AGGGGGGCGGC GCTT GCCGCCCCCCC          TTGCCTCGCGGTCAT  88 35
APT56_RS25805 NONE
APT56_RS25810 5783662 .. 5783676 +  -4.2  -3.01712   TGACAGCCTGACGAC               GGGC CTTGCCA GCCC               TGTTCAGCGGCCGGG  44 49
APT56_RS25815 5785559 .. 5785581 +  -8.4  -3.28924   TCGACAGCATCAGCT           CCAGGATGTG TTC CAGGTCCTGG           TTGTCGCCCGGCGTG  59 504
APT56_RS25830 NONE
APT56_RS25835 5789194 .. 5789228 +  -5.7  -4.07687   AAAAACAGGGCGTGA    TCGAT-CGC-CAGGCGC CCG GCGCCTGCGCGCAAGGA    TTTTGGAGCGGACAT  66 114
APT56_RS25840 NONE
APT56_RS25845 NONE
APT56_RS25850 NONE
APT56_RS25855 5792906 .. 5792928 +  -5.4  -2.98823   ACGTGGTCCAGGAAT           GGCTGGCGGT CTG ACCGCGGCCC           TATCTGTAGAGGCAA  46 12
APT56_RS25860 NONE
APT56_RS25865 NONE
APT56_RS25870 NONE
APT56_RS25875 NONE
APT56_RS25880 5799502 .. 5799522 +  -8.9  -3.14132   GACGTTCAGGCTTTC            CGGCTGGGT GAA GCCCAGCAG            TTCGTGCCCGGCAAG  56 382
APT56_RS25900 5804621 .. 5804643 +  -6.3  -3.28712   GCGCTTCCTGCAGGT          GCCG--CAGCC CCC GGCTGAGCGGC          TTGTCGCGGCGCACC  52 8
APT56_RS25910 NONE
APT56_RS25915 5807774 .. 5807787 +  -4.5  -3.68073   ATATCGGCGGATCCC               GCGTGC AGG GC-CGC               TTCTTCGGTGAGCTC  58 461
APT56_RS25930 5813019 .. 5813050 + -12.2  -3.55622   AGGCAACAGGGCAAC      GC-CGCGCCCGGGCT TCG GGCTCCGGCGCGCGC      TTTGCCCCCATTCCA  75 40
APT56_RS25935 NONE
APT56_RS25940 5815922 .. 5815951 +  -8.5  -2.80816   CTCAAGGGGGCGACA       CCTGCAGA-CCGGC AGA GCCGGATCTGGCGG       TGTCCTCGCTGGGGG  55 133
APT56_RS25945 5816794 .. 5816832 +  -5.1  -3.29471   CCCGCCTGCCCGACT  CCGCCCGC--CCGCGCCGC CTA GCGGCGCAGCAGCGCATGG  TTGATCTGGTCGGCG  49 59
APT56_RS25955 NONE
APT56_RS25960 5819102 .. 5819127 + -12.5  -3.72576   CAACTGATCATTCCC         CCGCGCCCCGGC AAC GCCGGGGC-CGA         TTTCCTGGAGACACC  80 34
APT56_RS25965 NONE
APT56_RS25970 5819737 .. 5819762 + -11.7  -3.90112   CTATCTGTAATCGCC         ACGCGGCCGCC TCCG GGGGGCCGCGC          TTTCATTCCCCGAGG  79 31
APT56_RS25975 NONE
APT56_RS25980 5821737 .. 5821762 + -16.9  -4.27316   ACGCGCAGAAAAAAA         GCGCCGGTCCGT TCA ACGG-CCGGCGC         TTTTCACTTACGCGG 100 152
APT56_RS25990 5823053 .. 5823073 + -12.6  -3.70773   GCCGACTCGACAAAA            GGGGCTTC CACAC GAAGCCCC            TTGTTGCGTCTGCCG  80 111
APT56_RS25995 5823996 .. 5824014 +  -7.3  -3.53012   CCAAACGCCAAAGAA             GGCCGCC CGCGC GGCCGCC             TTTGGCGACCCCGCA  60 237
APT56_RS26005 NONE
APT56_RS26010 NONE
APT56_RS26015 NONE
APT56_RS26020 NONE
APT56_RS26025 NONE
        livF NONE
APT56_RS26035 NONE
APT56_RS26040 NONE
APT56_RS26045 NONE
APT56_RS26050 5834735 .. 5834756 + -17.3  -5.67063   TTGGGCCCGCCGCTC           GCCCCTGGC GCTT GCCAGGGGC            TTTTTTTATCGTGAA 100 124
APT56_RS26055 5836702 .. 5836719 + -14.1  -4.27316   CCACGCAAGAAAAAA             GCCGCCC ACAC GGGCGGC              TTTTCACTTGCCGGA 100 148
APT56_RS26065 5839369 .. 5839392 +  -7.4  -2.57211   TGCCCCGCCCGCGCC          GGG-GCGGCTA CAG TGGCCGCATCC          CTTGTCCGGAGACCT  50 68
APT56_RS26070 5840056 .. 5840087 +  -7.8  -3.05384   GCCGCCCACACGAAG      CGCGTGCGCCGCAGC ATC GC-GCCGCGCTCGGG      TTCGCTGGGCAGCGA  52 477
APT56_RS26080 5842257 .. 5842278 +  -2.9  -3.35679   GAATGACTTAGACGC           TCGAAGCAG CTGC CTGTTACGG            TTATGAATCCCCCAG  47 85
APT56_RS26085 NONE
APT56_RS26090 5844635 .. 5844674 +  -4.3  -3.52652   GCGCAGGCCTGACAC GCG--CAG-CCGGCCTCGAT GCC ATCGAGGCCGGACCGAACCC TTATCGTTCAATCCG  51 29
APT56_RS26100 NONE
APT56_RS26105 NONE
APT56_RS26110 NONE
APT56_RS26115 5850142 .. 5850154 +  -6.2  -3.12351   TGCGATAGCCGCGCT                CGGC CACCA GCCG                TTCGATCTCGGGCCG  50 476
APT56_RS26130 5852444 .. 5852466 + -17.7  -3.66178   AGACAAAAACGAAAA           CGCCCCGGG AAATC CCCGGGGCG           TTTGACCTTCACGGC  93 74
APT56_RS26160 5857253 .. 5857274 + -13.7   -4.3208   CACCAGAATTAAAAA           GCCCGGCTC CTTG GAGTCGGGC            TTTTGCATTGTGGGG 100 36
APT56_RS26175 NONE
APT56_RS26180 5860770 .. 5860808 +  -5.1  -3.61715   GGTCGCTTCCAGCGG  CGGGCCGCCG-GCCTCGCC GAA GGTG-GGCACGTCGGGCAG  TTGTTCCGAGCGCTC  54 394
APT56_RS26210 5868271 .. 5868286 +  -7.5  -3.21276   GAAGCCCCTGTCCCG              GGGCG GTGCCG CGCCC               TCTTCTCACGGCCCC  57 39
APT56_RS26215 5869193 .. 5869207 +  -5.6  -3.07816   GCCCGGATCGATCTG               CTCGCC GAT GGCCAG               TTGCGTCAGTCCCAG  46 204
APT56_RS26250 5875049 .. 5875062 +  -8.1  -3.17075   TCGCATACAGCGTGG               TCCGC AGGC GCGGA                TTCAGTTGCCGGGCC  53 175
APT56_RS26260 NONE
APT56_RS26265 5878208 .. 5878227 +  -3.5  -3.09671   CCCTGTTCTTCTTCC            TGGTCTG AGGAGA CCGACCA             TGTTCCCCTTGGGAT  43 18
APT56_RS26270 NONE
APT56_RS26275 5880280 .. 5880290 +  -5.4  -3.05384   CGTCGGCGGCACGAT                 CGAT TGA ATCG                 TTGCATAGACCGGGC  46 387
APT56_RS26285 5882606 .. 5882616 +  -8.2  -3.60792   CTGAACCCTTCTCCG                 CCCG CGC CGGG                 TTTCGAAATTGAAAC  65 37
APT56_RS26290 NONE
APT56_RS26295 NONE
APT56_RS26300 5886376 .. 5886397 +  -5.1  -2.91681   AGGTGCTGTGACCGC           CGCCAGCACG AAT CGTCCTG-CG           TCTGTCGCCTTGGAA  46 30
APT56_RS26305 5888143 .. 5888159 +  -8.7  -4.13945   CAACCTTGCTCAAAG              CAGCGCT TGC AGTGCTG              TTTTCAACTAGCGAT  72 361
APT56_RS26320 NONE
        rpmA 5890255 .. 5890276 + -13.7  -4.72272   GGCCAGAACGGCAAA           GCCCTGTCG CGTG CGGCAGGGC            TTTTTCATCGCCGAG 100 96
APT56_RS26330 5891674 .. 5891693 +  -2.1  -2.52946   CGAATAAGCCATAAT            CGCAATC TCGTTC GATTACG             CCTTTTCTCGCGCCG  38 34
APT56_RS26335 5892837 .. 5892854 +  -4.8  -2.71712   CCGGAACTGATGCAT             CGCGAC AACCTG GTCGTG              CTTTGAGGCAAGCGG  44 2
APT56_RS26345 5894145 .. 5894161 + -15.1  -5.28176   AGTGGGATAAAAAAA              GCCCGGC ATC GCCGGGC              TTTTTTGTGCCTGCG 100 63
APT56_RS26355 5897106 .. 5897129 + -13.2  -5.56673   TGGGGCGATATGAAA          GGCCTGGATGC GTT GC-TCCAGGCC          TTTTTTGTTATCCGT 100 101
APT56_RS26395 5906067 .. 5906083 +  -3.5  -2.52623   CCAGAAGGGTTGAAC              CCGGGCG ACG CGCCCCC              ATCTTATCGACAGAA  39 28
APT56_RS26400 NONE
APT56_RS26405 NONE
APT56_RS26410 NONE
APT56_RS26415 5909488 .. 5909516 +  -4.5  -3.01712   CAGCTCGAATCCCAA       CGGGCGCACCAG GTGCAA TTGG-GCGCCGG        TATTGGCGCACAAGC  46 448
APT56_RS26430 5911747 .. 5911786 +  -7.9  -2.62616   CGCAACCAGCGCGCG TCGTTGCCGCTGCGC-ATG GCGT CGTCGCGCAGCGTC-GCGA  TCATGTCGCCCGTGC  48 324
APT56_RS26470 5921882 .. 5921904 +    -4  -3.84246   AACGGCCCCCCGCCC           TGCCGCGCTA AAA TTGCGCAGTA           TTTGATCATTGGCGC  58 112
        rimO 5923273 .. 5923294 + -18.7  -2.53911   CTAAGCATCCTGCCT           GCCGGCGGC GACC GCCGCCGGC            TGCCTTCAGGCTTCC  86 37
APT56_RS26485 5924146 .. 5924194 +    -5  -3.13164   CCCGGCGACAGGCTG GCGCCACCCGCGCCCGTGCCCCGC AAC GGGCGGCGCGGGC-CGGCAA-CGC TTCAGTGCTTGGCCA  47 73
APT56_RS26495 NONE
APT56_RS26500 NONE
APT56_RS26505 NONE
APT56_RS26510 5927448 .. 5927470 +  -5.5  -3.87815   CGCACGAACACGTCC          ACCGGCTGGC GCTT GCCA-CCGGC           TTTCTGCAACTCCAG  60 118
APT56_RS26525 NONE
APT56_RS26530 5931365 .. 5931390 + -10.3  -3.21395   TGCGCGCGTTTCGCG         TGAGCGTCGGG GCCA CCCGGCGCACG          TCTTCTCGCAACGCT  65 62
APT56_RS26535 5931945 .. 5931962 + -11.3  -5.27335   CCCCTCAAAGAAAAA             CCGATGC CGCG GCATCGG              TTTTTCTTTGACCGA 100 72
APT56_RS26550 NONE
APT56_RS26555 5936403 .. 5936422 + -16.4  -5.55664   CCCGCCCATGAAAAA            CGCGGCCC CTCC GGGCCGCG             TTTTTTTGGTGGTCC 100 47
APT56_RS26575 5944817 .. 5944845 +   -11  -4.00042   CGTTCCCCGGAAAGC       GAG-AGGGCCTCC ATAC GGAGGCCCTGCCC        TTCTTTGCTCAAGAC  81 44
APT56_RS26590 5948463 .. 5948475 +  -9.1  -3.61398   GGCCACGGTTCGGTA                GGGCA GCT TGCCC                TTCTTGCGCACCGGC  63 326
APT56_RS26635 NONE
APT56_RS26640 5959004 .. 5959016 +  -3.4  -3.77219   CACCCCTTCGCATAC                CGAT GAAAG ATCG                TTTCCCTTCCCTGAT  54 55
APT56_RS26645 NONE
APT56_RS26650 NONE
APT56_RS26655 NONE
APT56_RS26660 5961989 .. 5962000 +  -5.8  -5.05782   CCGCCAGGAAAGTGC                CTCC CACC GGAG                 TTTTTTGCAGTGCGT  87 352
APT56_RS26665 NONE
APT56_RS26670 NONE
APT56_RS26675 5965231 .. 5965288 + -13.4  -3.59979   TGCCGCCCAGCTCCA TCGCGGCCGGCGCGGCCGCCGCGCTCGAC CTC GTCG-GCGC--CGGCGTTGCCGGCAGTGA TTTCAGATACACACC  78 361
APT56_RS26690 NONE
APT56_RS26695 5969463 .. 5969520 +  -3.2  -3.53012   TCGGCCGAGGGCAGC AGGGTCTGGTCGGT-GAACCAGGCGCC GCGCA GGCCCTTGGCACTGGCGACCAGACGCA TTTCGCCCAGCGGCG  49 510
APT56_RS26710 5971062 .. 5971076 +  -3.4  -2.60423   GGGTCCAGTGGCTGC               GCGCGG CAT TCGAGC               TGGCTTGATTCCGGT  39 3
APT56_RS26715 NONE
APT56_RS26720 NONE
APT56_RS26725 5972971 .. 5972989 + -13.1  -4.54727   GGCCGCCGCCATGAA             CCGCCCG CCTGC CGGGCGG             TTTTCATTTGGCCAC 100 54
APT56_RS26735 NONE
APT56_RS26740 5975902 .. 5975913 +  -3.6  -3.14132   GCTGCTGCGCCGACG                CCCT TTGC GGGG                 TTGATCGCCGGCGCG  43 10
APT56_RS26745 5976701 .. 5976726 +  -7.6  -4.45544   CAAGCACGATTGTCC         CCCGAATTGA CATCTA TCAATACGGG          TTTTCCTTAATGCCG  78 178
APT56_RS26750 NONE
APT56_RS26755 5979416 .. 5979445 + -21.5  -3.17075   TTACGGTTGTTTTTG       CGGGCGGCTCAGG GGTT CTTGAGCCGCCCG        TTGCGTTGGCGGGCG 100 51
APT56_RS26785 5986397 .. 5986410 +  -3.1  -3.41878   CCAGGACGGTCTTTT               CC-TGG TCC CCAAGG               TTCTCGATTAAGCCA  47 1
APT56_RS26790 NONE
        gatB 5989476 .. 5989496 + -18.3  -5.27335   CAGACCGAACCGAAG            GCCGCGGCA TCT TGCCGCGGC            TTTTTGTTTGGCCAA 100 81
APT56_RS26800 5989890 .. 5989906 +  -7.9  -3.29263   CATCCTGGACGACCT              GAACGGC GAA GCCGTCC              TTGTCCCGCAGATCT  57 117
APT56_RS26810 5992055 .. 5992075 +  -2.5  -2.64735   CAGCACCGCTTCCCA            GATTCCAAT AAT ATTGGGGAC            ATATTAATTTTCCCT  38 186
APT56_RS26815 5993738 .. 5993764 + -17.3  -4.74103   ATGCGACGATAAAAA         GGCGGCGGGCT GTTCG AGCCTGCCGCC         TTTTTCCATTGCGGA 100 71
APT56_RS26830 5996085 .. 5996109 +  -7.7  -2.82516   CGGTCAAGGGCGTCT          GACGGCCGTGC CCG GTACCGCCGCC          TGTCCTGCTGGCCCC  52 24
APT56_RS26835 5996463 .. 5996474 +  -2.2  -3.72695   ACTTTTATAATCGCC                GGGT TGCC ACTC                 TTTCGTCGGGCGCAT  53 31
APT56_RS26840 5997432 .. 5997448 +  -7.9  -2.65354   AGTGGCCGCGCGGCC              TGCCGGC CAA GCCGGAA              TAAATTTCCAGTCCC  50 6
APT56_RS26845 5999027 .. 5999041 +  -2.1  -3.28712   GCGCCGGCATGCAGT              CGCCTG ACAA CAG-CG               TTCTGCCCAAGGGGG  44 104
APT56_RS26850 NONE
APT56_RS26855 NONE
APT56_RS26860 6002932 .. 6002947 + -11.8  -4.66833   GGCCCGCCCAAAGGC              GGCCGC GCGA GCGGCC               TTTTTGGGCTTACGC 100 326
APT56_RS26880 NONE
APT56_RS26885 NONE
APT56_RS26890 NONE
APT56_RS26895 6010322 .. 6010337 +  -6.8  -3.85698   TCCAGACCGGGCCAA              CCC-CGG TGT CCGAGGG              TTTATGACCCAAACA  64 207
APT56_RS26900 NONE
APT56_RS26905 NONE
APT56_RS26910 6014325 .. 6014336 +  -7.2  -3.10464   CGATCTGCTTGCGCG                CCGC CGCC GCGG                 TCTTGGCATTGGTGG  52 390
APT56_RS26935 NONE
APT56_RS26940 NONE
APT56_RS26945 NONE
APT56_RS26950 6020216 .. 6020245 +  -2.1  -3.53091   CGTCGCCCGGCGGCA      CCA-GCAGGCCCG ACACAC CGGGCA-GCATGG       TTTCCGGCACGCCAT  47 259
        nhaA NONE
APT56_RS26965 6023363 .. 6023380 +  -6.9  -4.08767   CAAGACGCCTCGCAG             GTTGCCC GCAA GGGCGGC              TTTTACAACCCTAGC  68 51
APT56_RS26985 NONE
APT56_RS26990 6028784 .. 6028802 +  -8.8  -2.91264   GTCCTGTCAAAATCC             AGGCGGAT GCG ATCCGCCG             TATATACATACACGC  53 496
APT56_RS27015 6041832 .. 6041846 +  -2.7  -2.62192   GCAGCATTACGGGAA               CGCGC CACGC GCACG               GTTGATTCGGTCGGC  38 180
APT56_RS27020 6043749 .. 6043775 + -18.1   -5.0133   CTGATCGGCACCCAG         CAAACCCCGCG CCTGT CGCGGGGTTTG         TTTTTTGGGAAAATG 100 44
APT56_RS27025 6045212 .. 6045247 +  -7.5  -3.14132   GGGTTTACGCAGCGC    GTCGACGCGCTCCATC AGCGC GA-GTTGCGCGTCGGC    TTCGTCGGCGCCGGG  53 239
APT56_RS27040 6049150 .. 6049176 + -18.1  -2.85668   ACCAGTTTCGCCCCG         GGGCTTGCACC ATGAC GGTGCAAGCCC         TATGATCTGCCCCTG  89 44
APT56_RS27045 NONE
APT56_RS27050 NONE
APT56_RS27055 6052805 .. 6052830 + -12.6  -5.30575   AGTAACCCCGCCCGG         CCACGCCGCA ATACAA TGCGGTGTGG          TTTTTTCCCTTTTTC 100 36
APT56_RS27060 6053791 .. 6053826 +  -8.3  -2.84723   CCACAAATTCTCATC    TCGCGG-CTGGCGC GCCACACTG GCGCCAGCCCGCCA    TGCTTCGTCTTGCGG  55 103
APT56_RS27065 6054982 .. 6055002 +   -14  -3.78329   ACGCCCGAGAAAAAA            GGCCGGCA ATAGC TGCCGGCC            TTTGCGTTACTGCGC  86 140
APT56_RS27115 6065243 .. 6065264 + -11.5  -2.92246   ACCACGAATTCGCGG           TCGCGCGCG ATGT TGCGCGCGG            TGTCCTTCAGGTTGC  61 435
APT56_RS27135 NONE
APT56_RS27140 6069519 .. 6069533 +  -4.2  -2.66255   CCGTGAGGAAAGTCT               GATGGC CCG GCAATC               TGCATTCTCTTGGCC  42 24
APT56_RS27145 6072086 .. 6072114 +  -6.6  -2.57211   GCCTCGCCGCCCAGC       CGC-GCGCCCTCG CGCA CGATGCCGCAGCG        CTTGTAGGCGCGCAT  47 102
APT56_RS27155 6074504 .. 6074532 + -16.8  -4.88217   CGCCCCCGTCTCAAC        GCTTTCCGGCTC CTCCT GGGCCGGAAAGC        TTTTCCTTTTTTCGT 100 74
APT56_RS27160 6076009 .. 6076028 +   -15  -3.01712   CCGTCCAAAAGAAAA            CGCCCCTG CATG CAGGGGCG             TCTTGCCAGGCGGGG  79 52
APT56_RS27170 NONE
APT56_RS27175 6079314 .. 6079327 +  -5.2  -3.53012   GAGTTCCCCCCGGGG               CCGC GCGAAA GCGG                TTTCCCCGGCCAGAA  53 50
APT56_RS27180 NONE
APT56_RS27185 NONE
APT56_RS27190 6082417 .. 6082462 + -13.2  -3.05384   CGCCGGCTGAGCGCG TGGCGCGGCGGC-CTGCAC-CG TGAT CGCGCGCAGCGCCGCGGCGCCC TTCAATCCCGGCCCG  69 498
APT56_RS27220 6087359 .. 6087376 + -14.1  -3.53012   CTGGGCGGCTACGGC             CCCCGGG TTGG CCCGGGG              TTTGCCCCCCGCCCC  81 199
APT56_RS27225 6088679 .. 6088690 +  -7.2  -4.67353   GGAGCAGTGCCTGGC                GGGG TAAT CCCC                 TTTTTGGATACGTGA  82 19
APT56_RS27230 6089308 .. 6089332 + -16.5  -5.63103   AGCGCCACATCGAAA          GGCTATGCTGG TTT CCAGCATGGCC          TTTTTTTCATTGCCG 100 57
APT56_RS27235 NONE
        hslU 6091480 .. 6091507 + -19.2  -4.69549   CGGCACAGACACGAA        GGCCCGCCGCAA GCGA TTGCGGTGGGCC         TTTTGCTTTTGCGTT 100 65
APT56_RS27250 6092699 .. 6092715 +  -9.4  -4.56133   CGCTGAAATGAAAAA              TGCCCC TTCGC GGGGCA              TTTTCCTTGTTGGCG  86 111
APT56_RS27260 6094804 .. 6094824 + -12.5  -3.74693   TACGGCGTGGCCCCG            CCCGCGCCT TTC AGGCGCCGG            TTTCGTACAGTGCGG  80 111
APT56_RS27315 NONE
APT56_RS27320 6105340 .. 6105354 +    -7  -3.08471   GACGATGACCGGCAC               GCCGGC GGC GCAGGC               TTCGATCAGGTTCTG  52 467
APT56_RS27395 6129040 .. 6129054 +    -7  -2.69964   TCTATAAGTAGCAAC               CCCGCC AAG GGCCGG               TGATATCCTTGGCGG  48 30
APT56_RS27400 6130488 .. 6130500 +  -7.7  -2.52516   CCAGCCGGAATTCCA                CCTGA TTC TCAGG                ATTGATCATGCGCCG  50 21
APT56_RS27405 6131676 .. 6131709 +  -4.6  -3.05816   CGGTCGGCGAGTCCA     GGCGCATGTCTACGG CCACA TCGTAGATCT-CGCC     TTCGGTCACGCGTAC  46 309
APT56_RS27485 6148610 .. 6148637 + -15.6  -4.50976   CAGGCTTGACGGTCG        C-ACGGCCGGGCG CAT TGCCCGGCCGTTG        TTTTATGCTGTCGGC 100 56
APT56_RS27490 6149609 .. 6149629 +  -3.1   -2.7185   CCTGATCGGCTGATC            CGGCGCATT GCG GACGCGCCA            TGCTTGGGAGATGAT  40 28
APT56_RS27495 6150338 .. 6150352 +  -3.6  -4.08767   ATCGTGATTAGTATT               CATTTT GGA AAGATG               TTTTCAGGGAATAAG  60 277
APT56_RS27500 6150917 .. 6150950 + -15.4  -4.70879   CTGGCAATCGCCCCC     CAAAAGCCCTCCGG CCTCAC CCGGAGGGCTTTTC      TTTTTGACGTTTCGG 100 64
APT56_RS27505 6152231 .. 6152253 +  -6.8  -3.17527   AGCCCTCCAGGCGCA           GCGTCGCCCG CAC CAGGCGCTGC           TCTTCCTGCTCGATC  54 51
APT56_RS27515 6155418 .. 6155437 + -13.6  -5.41746   GCACGCCTCAAATTC            CGGACAGC CCAG GCTGTCCG             TTTTTTTGCCGGCTT 100 66
APT56_RS27520 6156166 .. 6156181 +    -9  -3.86897   GGTTTTCAATCAATT              TCGCAC GATC GTGCGA               TTTATGCGGCATGGA  69 73
APT56_RS27525 NONE
APT56_RS27560 NONE
APT56_RS27565 6166268 .. 6166278 +  -2.4  -3.23216   ACAGTTCGCGCACGA                 TGCG CCG CGCC                 TTGGTGGTCATGCGC  43 277
APT56_RS27585 6171547 .. 6171564 + -14.1   -5.7946   AACGGAATGAAAAAA             GCCGGCG AAAT CGCCGGC              TTTTTTTGTTGAACG 100 40
APT56_RS27590 NONE
APT56_RS27595 6173130 .. 6173140 +  -8.2  -2.91695   CATCGTCAGCACATT                 GCCG CTG CGGC                 TGGTTTCGACGTCGA  53 294
APT56_RS27605 NONE
APT56_RS27610 6174780 .. 6174799 +   -15  -3.57144   GCCACGCATGAAAAA            GGCCCCGT CGAG ACGGGGCC             TTTAGCCATGCGAGC  87 50
APT56_RS27630 NONE
APT56_RS27635 6181062 .. 6181087 +   -14  -2.71712   ATGCAACGCCAACTA         C-CGGCGGGCC CTTGC GGCCCGCCGCG         GTTTCAACGCGACGC  71 123
APT56_RS27655 6184916 .. 6184943 + -21.4  -2.63079   GCGCCGCGCAAAAAA        CAAGGGCGGGTC CGAA GACCCGCCCTTG         TCGCTTATCTAGACA 100 77
APT56_RS27750 6196762 .. 6196775 +  -9.5  -5.75342   TTCGCCCCCAGAAAA               GCCCC TTGC GGGGC                TTTTTTTTCGCCCGC 100 50
APT56_RS27755 6199126 .. 6199143 + -14.1   -4.4078   AGCCCGATGCGACAA             GGCCCGC GCGA GCGGGCC              TTTTCATTGCGCGGC 100 57
APT56_RS27765 NONE
APT56_RS27770 6202374 .. 6202384 +  -2.4  -3.21099   TCCAGAACAAACGCT                 GAGC CCT GCCC                 TTCATGCTGGAAACC  44 24
APT56_RS27775 NONE
APT56_RS27780 NONE
APT56_RS27785 NONE
APT56_RS27790 6206469 .. 6206511 + -13.3  -2.72344   CTGGCGGCCTTGCCT GG-GCGTCGGCGGGGGCGGT AGCC ACCGGCGCCGCCGGCCCGCC TCGTTCCGCATCCGC  67 502
APT56_RS27880 NONE
APT56_RS27885 NONE
APT56_RS27890 6222415 .. 6222428 +  -9.5  -3.75332   ACGTGCGAGATGACG               GCCGG CTTG CCGGC                TTTCACTTCCAGCGT  71 71
APT56_RS27900 6224268 .. 6224286 +    -3  -2.73364   GCCGCCCCGCCCCGC             GCGGGC AAAAAAA GGCCGC             TGATTCGCATCAGCG   0 42
APT56_RS27895 6222359 .. 6222379 -  -2.4  -3.72576   TGGCGCCCGAGGAAA            CCGCGGAC TGACG GTCCGCCT            TGCCGGCGCCCTATT  53 36
APT56_RS27875 6217010 .. 6217049 -  -5.1  -4.59773   GCGCACTGTCAAAAA CTTTTGTGCGCGAAACGCG CGGG CGCGTTGC-CGG-CAAAAG  ACGGCCAGATAAGCG  77 192
APT56_RS27870 6216104 .. 6216115 -  -7.2  -2.78384   CCGTGTTTCATTACA                CGGC CATG GCCG                 TCCAATAAGACGACC  48 145
APT56_RS27865 NONE
        fusA NONE
         tuf 6212148 .. 6212173 -  -8.9  -3.06509   TCCTAAAGAACGAGA         GGCGAGGGCTT TGAT AGGCCCTCGCT          GGTTGTGTGCTGCTT  57 53
        rpsJ 6211743 .. 6211770 - -15.6  -5.26119   GGCGCAAAAACAAAA        TGGCCGCAGTCC CGAG GGATTGCGGCCA         TTCTTCACGAGCCCA 100 70
APT56_RS27845 NONE
APT56_RS27840 NONE
        rplW NONE
APT56_RS27830 NONE
APT56_RS27825 NONE
APT56_RS27820 NONE
APT56_RS27815 NONE
APT56_RS27810 NONE
APT56_RS27805 NONE
APT56_RS27800 6206658 .. 6206681 - -14.6  -5.90981   CGAGACGAAAAAAAA          CGGCAAGGGC CTGA ACCCTTGCCG           TTTTACCTCAGAACG 100 64
APT56_RS27795 6205573 .. 6205606 -  -5.2  -2.57931   GCGATCCGCGAGAAT     CCGTTCCGC-GCCGA AGCGA TCGGCTACCGCACGG     TGCTGTACCGCAGCC  42 460
APT56_RS27760 6199126 .. 6199143 - -14.1  -3.32963   AGCCCGATGCGACAA             GGCCCGC GCGA GCGGGCC              TTTTCATTGCGCGGC  80 47
APT56_RS27745 6194305 .. 6194337 -  -5.6  -3.94989   GAAAGAGAGAGCAAA     TACACGACAGT-GCC TGTG GACAACTGTCGCGTT      GCCCCCGCCGAGGAT  64 47
APT56_RS27740 NONE
        rplX NONE
APT56_RS27730 NONE
APT56_RS27725 NONE
APT56_RS27720 NONE
APT56_RS27715 NONE
APT56_RS27710 NONE
APT56_RS27705 NONE
APT56_RS27700 NONE
APT56_RS27695 6189925 .. 6189941 -  -7.9  -3.14564   TCACCTCGTGATCAA              GCAAGCG AGC CGCCCGC              GGCTTCGATGGCGGC  55 5
        secY NONE
        infA 6188248 .. 6188258 -  -4.6  -3.48276   GGTCGGTGCAGATAA                 CGCG CAC CACG                 CCGTGACGTTTGATA  53 122
APT56_RS27680 NONE
APT56_RS27675 6187388 .. 6187403 -  -4.6  -2.87344   GATTCCCTTTAGATA              CGACGA CGCT TCGGCG               GACGGCAGCCGTTGT  45 3
APT56_RS27670 6186643 .. 6186672 -   -10  -3.61654   GATACTTACCGCAAA      GCCCGC-C-CCGCC AAAA GGCGGAAAGCGGGC       TGCTGCGAGACTTGC  71 99
APT56_RS27665 6185513 .. 6185531 -  -9.5  -3.53012   GGGCGCCGCGGGAAA             CGCCCCC GCGAG AGGGGCG             CCACCCTGCAAGACT  65 40
APT56_RS27660 6184916 .. 6184943 - -21.4  -5.00616   GCGCCGCGCAAAAAA        CAAGGGCGGGTC CGAA GACCCGCCCTTG         TCGCTTATCTAGACA 100 48
APT56_RS27650 6183919 .. 6183936 -  -4.7  -4.57073   CAGCTTGGGGAAAAA             GGCACGC ATCG GTGCGCC              GGTTCGGACCGCGGG  74 49
APT56_RS27645 6181972 .. 6181984 -  -9.1  -2.72977   ATTGCAGATAGATCA                GACCG GTG CGGTC                CTGGCTTGCATCGAC  56 127
APT56_RS27640 6181062 .. 6181086 - -14.2   -2.7566   ATGCAACGCCAACTA          CCGGCGGGCC CTTGC GGCCCGCCGC          GGTTTCAACGCGACG  71 30
APT56_RS27625 6178261 .. 6178287 -  -8.6  -5.18357   GAATTCATGAAAAAA         GGGGGGCCGC GCGATCG GCTACCCCCC         TCGTAGACAGCGCAT 100 109
APT56_RS27620 NONE
APT56_RS27615 6174780 .. 6174799 -   -15   -4.7497   GCCACGCATGAAAAA            GGCCCCGT CGAG ACGGGGCC             TTTAGCCATGCGAGC 100 46
APT56_RS27600 6172827 .. 6172849 - -16.4   -4.3208   CCCTACAATGCAAAA           CACCCGATGA AGT TCATCGGGTG           CTCAGTCCGTAATCG 100 90
APT56_RS27580 NONE
APT56_RS27575 NONE
APT56_RS27570 6165584 .. 6165616 - -10.5  -3.02263   ATACGTGGCTGAACA      GCATCCCGAGGCC CGCCTGT GGCCGCAGGACGC      CCGCGCCCGGGCCCG  59 510
APT56_RS27555 6160953 .. 6160983 - -19.8  -3.72695   ACCGGCTTCATGAAA       CTCGCCGGTCATCG CAG CGATGACCGGCGAC       GCCGGTGAAGCCCTA 100 180
APT56_RS27550 6160268 .. 6160314 - -21.2  -3.59262   GGCGAGACGCCCAAA CGA-C-ACAAAGCCCGGCAAGC GCAAG GCTTGCCGGGCTTTGTCGATCG ACCGCCGGGAAGGCG 100 45
APT56_RS27545 6158843 .. 6158854 -  -4.4  -3.57792   TGAGGGATCTCCAAA                TAGC GATG GCTA                 GGTTGTTTCGTCTAA  53 248
APT56_RS27540 6158485 .. 6158505 -    -2  -2.50816   GTGCGATTCAGGAAG           TGCTATCTA TCTG TAGATAG-A            TTCAAGGTCAAAAAA  37 43
APT56_RS27535 6158077 .. 6158125 -  -8.1  -3.05384   GGCGCTCCGATGCAA CCGTGCGAACCCCGGCCGGG AATGTTCCCG CCCC-CCGGGGTTCGCAGTG GCCAACATCGGACTC  55 39
APT56_RS27530 6157367 .. 6157393 - -14.5  -3.82202   GATCCGCAAACACAA        CGGCCGCAA-GC TTGC GCGTTGCGGCCG         TGGCGGAGAAAAGAC  91 49
APT56_RS27510 6151721 .. 6151750 -  -5.5   -3.0263   ACGAGGCCTTCAACA       CCTCGGGCGGCCT GGGC ACGCTGCCCGCGA        CCCTGCTGGGCCGCG  46 483
APT56_RS27480 6146596 .. 6146623 -  -8.4  -3.53444   TCAGGCCGGCGCAAA        CCGTCGCCACGCC GAG GGCGCGG-AACAG        GAAAGCGGACTGGAT  62 126
APT56_RS27475 NONE
APT56_RS27470 NONE
APT56_RS27465 6143682 .. 6143697 -  -3.2  -3.12606   GTAGACACGATTGAA              CGCGAT AGGC ATGGCG               GGTCTCTAGTGGCAG  43 57
APT56_RS27460 NONE
APT56_RS27455 6140765 .. 6140790 - -10.3  -3.23853   CTTCCGGAATGAAGA         CCCGGGCCGCG CGCA CGCGACCCCGA          ATCGGCGGACAAGGG  65 104
APT56_RS27450 6139336 .. 6139351 - -11.8  -3.32844   CGCTGGACCGGACAA              CGGCCG GGCA CGGCCG               GAAAAATACGGGAAA  73 132
APT56_RS27445 NONE
APT56_RS27440 NONE
APT56_RS27435 6136074 .. 6136125 -  -9.3    -5.252   GAGGCCCACAAAAAA GAAGCGTCCCGGCAAGCACCGCC AACCCA GGCGGCGTTTGCCAGATTACTCC AATTCCATGAACCCT 100 275
APT56_RS27430 NONE
APT56_RS27425 NONE
APT56_RS27420 NONE
APT56_RS27415 NONE
APT56_RS27410 6130924 .. 6130937 -  -2.3  -3.28712   GCTGGTGTGGGACAA               GCTCG ATTT CCAGC                GCGGCGGGACCGGCC  45 477
APT56_RS27390 NONE
APT56_RS27385 6124781 .. 6124800 -  -4.9  -3.85817   ACTCCCGGCCACAAA            CCGCACA GCAGAA TGAGCGG             CGCCGCGGGGCCAAT  60 472
APT56_RS27380 NONE
APT56_RS27375 6118706 .. 6118741 -  -8.9  -3.14344   CATCTGCGTGATCAA    CTGTCTGTGCCGGGT CAACAT ACCCCGCACAGGCTG     AATTACTTCTGATAT  57 73
APT56_RS27370 NONE
APT56_RS27365 6116467 .. 6116482 -  -2.4  -4.11394   ACGCGACGTCCAAAA              CGCGTC TGCC GGCGCA               ATAAGGCTGCGCAAA  58 154
APT56_RS27360 NONE
APT56_RS27355 6113435 .. 6113448 -  -3.7  -3.25093   ACATTCCAAGCAATA               TGCCG TCTC CGGCG                ATCTTCCTATCCGAT  47 32
APT56_RS27350 NONE
APT56_RS27345 6109829 .. 6109843 -  -4.9  -4.50058   CATTCATAATCAAAA               GCACC TCACC GGCGC               AAGAATAGCCGATAG  74 16
APT56_RS27340 6108762 .. 6108779 -  -5.5   -3.4052   GGGCAAGCGAAGTAA             CGCATGC CGGC GCACGCA              GGATCAGCTAACGTA  53 29
APT56_RS27335 6107488 .. 6107506 -    -3  -2.75382   CATGCGATTGAAGCA             GCGAATGT ACA ACAAACGC             AGGCAAGCAGGCTCG  40 89
APT56_RS27330 NONE
APT56_RS27325 6105003 .. 6105028 - -11.9  -3.01712   CGTGCGCCCGGAAGA         CGAAG-GGCGCG ACA CGCGCCGCTTCA         GCCAGGAACTGAACC  68 100
APT56_RS27310 NONE
APT56_RS27305 NONE
APT56_RS27300 NONE
APT56_RS27295 NONE
APT56_RS27290 6098928 .. 6098946 - -11.6  -3.07994   TGCAACTTGATGCAA             CGCGGCGC GTT GCGCGGCG             CTCAGTCAAGCTTGA  66 27
APT56_RS27285 6097465 .. 6097492 - -14.8  -2.72436   TGAGAATCAAATGGA        TAGGGACGGGCC ACCC GGCCCGCCCCTT         CTTGGTGAAGCTTAC  75 70
APT56_RS27280 6096518 .. 6096533 -    -6  -3.05816   GCATCGTGCAGGCAA              GGCCCG CCGC CGGGGC               GCGCGGCATGGGCGG  49 65
APT56_RS27275 6096197 .. 6096211 -  -4.2  -2.62184   GCTGCCCTTACAGGA               CGATCG ACA CCATCG               GATGGCCGTGCAAGG  41 3
APT56_RS27270 NONE
APT56_RS27265 6094760 .. 6094771 -  -5.8  -3.86346   CCACGTTGGCACAAA                GAGG AGTG CCTC                 GTACCGGGCCTGGCG  62 68
APT56_RS27255 6092699 .. 6092715 -  -9.4  -4.98531   CGCTGAAATGAAAAA              TGCCCC TTCGC GGGGCA              TTTTCCTTGTTGGCG 100 58
APT56_RS27245 6091480 .. 6091507 -   -17  -3.35197   CGGCACAGACACGAA        GGCCCGCCGCAA GCGA TTGCGGTGGGCC         TTTTGCTTTTGCGTT  90 121
APT56_RS27215 6085621 .. 6085640 -  -3.4  -2.52896   CCACGGCCCAATGCA            GCGCCGTC ATGC GAAGGCCC             TCGTATGCCATTGGC  39 12
APT56_RS27210 NONE
APT56_RS27205 NONE
APT56_RS27200 NONE
APT56_RS27195 6081835 .. 6081852 -  -3.4  -3.72576   GCGCCGTGCAGGAAA             TGCTGG GCCACG CCAACA              TCTCCACCACCCAGA  55 131
APT56_RS27165 6076009 .. 6076028 -   -15  -5.07652   CCGTCCAAAAGAAAA            CGCCCCTG CATG CAGGGGCG             TCTTGCCAGGCGGGG 100 45
APT56_RS27150 6072014 .. 6072055 - -18.7  -2.57132   TCGGCGCGTGAGAAT GCACCGGAGCCTGGCGCGGC GCA GGCGCGCCAGGCTTC-GCGC CAGAACGCTCAGGCG  86 34
APT56_RS27130 NONE
APT56_RS27125 NONE
APT56_RS27120 6064578 .. 6064609 -  -2.8  -2.72463   AGTCAGTTCGAATGA      CGGCCAGAGCGC GCTGGAAT GGGCGCTGGACG       GCCACGGCATCGTCA  39 268
APT56_RS27110 6062768 .. 6062786 -  -9.5  -3.78934   CCTTGCTTAGAACAA             CGCGCCC ACGCG AGGCGCG             CGATGTGTCGCCGGC  71 43
APT56_RS27105 NONE
APT56_RS27100 NONE
APT56_RS27095 6059621 .. 6059652 -  -8.7  -3.35679   TGGCTTGATTGACAA      CAGGCCAAGGGACC ATCCA GGCCGCT-GGCCTG      ACTGCCAGCCGGTGG  60 133
APT56_RS27090 6059293 .. 6059307 -    -7  -3.05343   GTGACACCCTCAAGA               CCGCGC CCG GCGCCG               CCGGCCTAGTTGTTG  51 31
APT56_RS27085 6057963 .. 6058002 -  -7.9  -2.62024   CACCACGACAATCGA  GTGCTCGCCTTTT-CCGC CATAC GCGACAAAAGGTGAGCGC  CGTTGCTGTAACGCC  50 216
APT56_RS27080 6056426 .. 6056447 -  -9.4  -3.59979   CCCGCGGACCGGAAA           GCCCGCGCC GACAT GGCGCGG-C           ACTTTCCTATTTTGC  68 49
APT56_RS27075 6055922 .. 6055944 - -10.4  -2.67171   CATTGCATGAAACAG           GTGCCGCCCC CTC GGGGCGCCGC           GGACCGGCTTGGCCG  59 96
APT56_RS27070 6054982 .. 6055002 - -14.7  -5.24531   ACGCCCGAGAAAAAA            GGCCGGCAA TAG CTGCCGGCC            TTTGCGTTACTGCGC 100 58
APT56_RS27035 NONE
APT56_RS27030 6044524 .. 6044563 -  -3.3  -3.25823   TGTGTCGGAGATCAA  CCCGCAGGCCGAAGCGT GGATCG ACGCCATGGGCCGCTGG   CTGGAACAGGGTGCG  47 470
APT56_RS27010 6038857 .. 6038889 -  -8.9  -3.23899   CGTGAAGCAACTGAA      CGGACGACGGCCGGG GCG CACGGGCCCCGCCCG      GTCTAGAACTCGAAC  59 28
APT56_RS27005 6031400 .. 6031410 -  -4.6  -3.65046   CTGGGACCGCAAGAA                 GCGA TTG CCGC                 GTCGAATTGGCGCTG  55 80
APT56_RS27000 6028979 .. 6029007 -    -3  -3.61356   ATTAGCCAGGGCAAA        CGCGGTGCTCAC TTGCC ATAGGCATCGCG        AGGCTCGGCCAGGCG  51 5
APT56_RS26995 6028152 .. 6028202 -  -6.6  -3.61715   TACGCCGGGGAAGAA TTCCACAGCCTGGTGCGCGAAGTC ATC GCCTCGGTGGACCAGGCGGCGGAC AAGGCGTCCGCGCAA  57 171
APT56_RS26980 6025488 .. 6025498 -  -2.4  -2.52464   TGTCCTCGGAACGCA                 TGCC ACG GGCC                 GGATCGCCTCCGGTT  37 143
APT56_RS26975 NONE
APT56_RS26970 6023353 .. 6023378 -  -9.7  -3.26722   CCGACATTCACAAGA         CG-CCTCGCAGG TTG CCCGCAAGGGCG         GCTTTTACAACCCTA  62 38
APT56_RS26955 6019964 .. 6020001 -  -5.5  -3.16564   GGTCGAGGCCATGAA   CGCACTGCTGTGGCACTG AGG CAGCGGCACGG-AACGCG   CCGGCCCGATTTCAC  49 37
APT56_RS26930 NONE
APT56_RS26925 6015711 .. 6015733 -    -4   -3.0247   AATCCCGAGAGAAAC           GCGAACAAGG CCA CCATGTCAGC           CTCCCATCAGGTGCC  44 21
APT56_RS26920 NONE
APT56_RS26915 6013980 .. 6014024 - -10.5  -4.60292   GATAAGAAGAAGAAA GGC-GCGCGCCCGGGACCGG CAAAGC CCGGGCGCGGCAGCGCCGCC GGCGACGGCAGGCTC  91 39
APT56_RS26875 6004282 .. 6004328 -  -7.2  -3.02263   AGACCCCGCCGAAGA GGGTGACGGGGATCAGGCG ACACCCCCAG CGCCTGAGCCCCG-CGCCG TGTCGACCAAGGCTG  50 56
APT56_RS26870 6003618 .. 6003642 - -11.5  -2.54896   CCCTTACTGAATTGA          TAGCGCACGAT TAC ATCGCGCACTA          TTTATAACCGGGAAT  62 78
APT56_RS26865 6003050 .. 6003078 - -23.3  -5.60993   GGGCGGATAAAAAAA        GGCAGGATTGCGC TTG GCGCAATCCTGCC        TTTGCTTTTGGCGCG 100 58
APT56_RS26825 NONE
APT56_RS26820 5993738 .. 5993764 - -15.1  -4.91511   ATGCGACGATAAAAA         GGCGGCGGGCT GTTCG AGCCTGCCGCC         TTTTTCCATTGCGGA 100 155
        pyrE 5989853 .. 5989867 -  -3.5  -3.64703   GGTTGCCCAGTCAAA               CCTGC AGCGA ACAGG               CGTTTACCATCCTGG  51 440
APT56_RS26780 5984816 .. 5984826 -  -2.4  -3.05046   GGAGCCGTGGAAAAG                 CGGG GCT CCGG                 GCTGGCGGGCAGAAT  42 40
APT56_RS26775 NONE
APT56_RS26770 NONE
APT56_RS26765 NONE
APT56_RS26760 5979843 .. 5979856 -  -9.5  -4.24948   CCACCACATCGAAAA               GCGGC CAAT GCCGC                ATCGAAAAGCAGCGC  81 406
APT56_RS26730 5973091 .. 5973118 -   -17  -4.56597   GGCCTGGCCCAAAAA        GAAACCGCCCGC ATGA GCGGGCGGTTAC         GGCGGGGGAACAGGT 100 52
APT56_RS26705 NONE
APT56_RS26700 5968870 .. 5968880 -  -2.4  -3.82205   GGAACAGACCAACAA                 CCTG TAC CGGG                 TCAAGATCGGCCCCT  56 139
APT56_RS26685 NONE
APT56_RS26680 5964539 .. 5964554 -  -8.2  -3.16668   GAATACCTGGAGCAA              GGCGGC TACG ACCGCC               ACCTGCGCCGCCTGC  56 367
APT56_RS26630 5955984 .. 5956007 - -19.6   -5.1861   CGCACGACGAAAAAA          GCCACCCGCC GATA GGCGGGTGGC           TTGCAAACGACAGGC 100 75
APT56_RS26625 5955148 .. 5955166 - -10.2  -2.56728   AGTAGCCACAGCAAC             CGGCATGG TTC CCAGGCCG             TCTCTGGCGCCATGA  58 100
APT56_RS26620 NONE
APT56_RS26615 5952349 .. 5952359 -  -3.2   -3.5812   TACCCATGAGAAATA                 CCAC ATG GTGA                 AGGCTCCTTAGCTCA  51 38
APT56_RS26610 NONE
APT56_RS26605 NONE
APT56_RS26600 5948773 .. 5948786 -  -3.7  -3.52539   CAAGGCGAACTATAA               CCGCG CATC CGCGC                TTAAGCCAGGATTGC  51 26
APT56_RS26595 5947970 .. 5947988 -  -5.9  -2.78384   GCGCCTGGCAGGACA             GGGCCTG GGCAT CACGCCC             CTGCTGGTGTTCGAT  46 218
APT56_RS26585 5946461 .. 5946479 - -10.3   -4.8048   TCCCGAGACGAAAAA             CCCCTTG GCGAG CAAGGGG             TTTCGTGGGGACCGT  95 51
APT56_RS26580 5944815 .. 5944845 -  -9.7  -3.53012   TCCGTTCCCCGGAAA      GCGAGAGGGCCTCC ATAC GGAGGCCCTGCC-C       TTCTTTGCTCAAGAC  65 140
APT56_RS26570 NONE
APT56_RS26565 5938451 .. 5938472 - -18.7  -4.56914   CCACCCAAAGCAAAA           CGCCCGGCG TCAC CGCCGGGCG            TTGCGTCCTGGCGCC 100 54
APT56_RS26560 5936403 .. 5936422 - -16.4  -4.72272   CCCGCCCATGAAAAA            CGCGGCCC CTCC GGGCCGCG             TTTTTTTGGTGGTCC 100 71
APT56_RS26545 5933070 .. 5933080 -  -8.2  -3.05596   GAGCGGCCCATTGAA                 GCGG GGC CCGC                 AAGCGCGCCGAGGCG  57 97
APT56_RS26540 5931945 .. 5931962 - -11.3  -5.27335   CCCCTCAAAGAAAAA             CCGATGC CGCG GCATCGG              TTTTTCTTTGACCGA 100 71
APT56_RS26520 5928380 .. 5928409 -  -4.1  -4.13995   CCGGGAGAAAGGAAA       CGGGCTC-AGGCGC GCA GCGCTTCGCGCTCG       GCCTTTTTCAGCTTG  62 1
APT56_RS26515 5927359 .. 5927416 - -11.8  -3.29461   CAACGCCCCTGAGAA CG-GGCCGACCGCCATCACGGCGGGGC CCGTT GCCGCGACGCGGCGGCAGCCGACCTCA GGCCGGCTGCCAGCC  71 23
APT56_RS26490 5923941 .. 5923967 -  -8.7  -3.06696   TGCGGCGCGAAGACA        TGCGCACGGTGC CGCC GCAC-GTGCGCT         ATCACCTGACAGAAC  55 254
APT56_RS26480 5923114 .. 5923136 - -12.6  -3.14051   CGAGGTGGATGAAGA           CGGCGCCGTG GGC CGCAGCGCCG           GCGATGCGCCGGAAA  68 189
APT56_RS26465 NONE
APT56_RS26460 NONE
APT56_RS26455 NONE
APT56_RS26450 NONE
        trkA 5914653 .. 5914663 -  -2.4  -3.53012   CGGTCCGTCGGGAAA                 CGGG ACG CGCG                 GGCTCATCAGAAGAA  47 32
APT56_RS26440 5912957 .. 5912972 -    -9  -4.30719   TCCCTCTAGAACAAA              GTGAGC GAGC GCTCAC               AACGTAGGAAGGACG  77 201
APT56_RS26435 5911456 .. 5911500 - -19.2  -2.94099   CGCCCTGACGAGACA CCCCCCGGCC-GACGGCCCGC TTGC GCGGGACGCCCGGCCAGGGCG CAAGGCTTGCAACTG  93 52
APT56_RS26425 5909597 .. 5909623 -  -3.4   -4.1964   TGGAACATGGCAAAA         GGCGCGCAAGAC ATT GACAGGCGCGCG         GTCCGGGACGGCCGC  60 109
APT56_RS26420 5909081 .. 5909113 - -14.2  -2.52464   TTGCGCGGCAAGCCA     CGC-CGGCGAGCC CGTCAATC GGCTCGCCGAGCG      GGGCCTCAGACGCCC  70 31
        gpmA NONE
APT56_RS26385 NONE
APT56_RS26380 NONE
APT56_RS26375 5900877 .. 5900904 -  -6.1  -3.68569   TGAGGGACGGAATAA        CGCGGCGTCAG TGCCCG CGGGCGCCGCA         AACGGCGCATTCAGG  57 5
APT56_RS26370 5899562 .. 5899575 -  -2.3  -2.62616   CCAGTGCGGAGACGA               CTCAG GCCA CTGCG                GTGGCGTCGCCGGCC  38 13
APT56_RS26365 NONE
APT56_RS26360 5897106 .. 5897129 - -13.2  -3.83026   TGGGGCGATATGAAA          GGCCTGGATGC GTT GC-TCCAGGCC          TTTTTTGTTATCCGT  86 245
APT56_RS26350 5894145 .. 5894161 - -15.1  -5.61596   AGTGGGATAAAAAAA              GCCCGGC ATC GCCGGGC              TTTTTTGTGCCTGCG 100 45
APT56_RS26340 5892505 .. 5892526 -  -3.6  -2.55074   CGCAAGGCGAATGCA           TCGGCAGCG AACTG CGC-GCCGT           ATTGCCGGTCTGGTC  40 373
APT56_RS26315 5888142 .. 5888160 -    -3  -3.54459   CCAACCTTGCTCAAA             GCAGCGCT TGC AGTGCTGT             TTTCAACTAGCGATC  49 32
APT56_RS26310 5887852 .. 5887877 - -12.5  -5.37593   GCGCAAAGCAAAAAA         GCCGGCAACGC TTGC GCGGTACCGGC          TTTCAGCCAAAGGTG 100 77
APT56_RS26280 5879699 .. 5879751 -  -2.6  -3.35679   CCGCGCCATCGAGAA CCAGTGCTACGTGATCGCCGCCGCC CAGATC GGCGGCGACGGCC-CGG-GC-CTGC CCTGCCTCGGCCGCA  45 278
APT56_RS26255 5874774 .. 5874797 -  -5.8  -3.53012   GGCTTTGCCGGCAAA          TCCGCCGACG AGAT CGCCCGCGGC           ATCACCTCCGGCGGC  55 176
APT56_RS26245 5873759 .. 5873773 -  -2.8  -3.54935   CAAATTTTGCCGAAA               TCCC CGGTAGC GGGA               TTACCCGATGGGGCG  49 76
APT56_RS26240 NONE
APT56_RS26235 NONE
APT56_RS26230 NONE
APT56_RS26225 NONE
APT56_RS26220 5868639 .. 5868696 - -14.6  -2.90349   GCTGGAAACCGAAAT CGCGGCGCAGGCGGCCGCCCAG-CGCG GCAAG CGCGACATGGCGGCCATCGACGACGCG CTGGCCGCCATCACC  72 390
APT56_RS26205 NONE
APT56_RS26200 5864699 .. 5864728 - -20.9  -4.19624   CATCTCGAATACAAA       GCAAGGCCGATTC CCGC GAATCGGCCTTGC        CGGCAAGTGTCAGTC 100 35
APT56_RS26195 5862460 .. 5862475 -  -2.5  -2.82933   CTGGAACTTAGCACA              TCCGC CCGCCC GCGAA               GCCCGGTCGCGCCGG  40 47
APT56_RS26190 NONE
APT56_RS26185 5860383 .. 5860441 -  -2.9  -4.07568   CGCGCGGCGGCAAAA GCGCGCGGCGGCG-AACTAGG-CGGTTGC TGC GCCGTCATCCTCATCGCGCCGCCGCGGAC GGCTGCCGGCAAGAC  60 114
APT56_RS26170 5858112 .. 5858135 -  -5.2  -2.56838   GACACGGAAAGAGAG          GGAGGCGGCCA GTC TAGC-GCCGCC          GGCGCGGGCCGCGCA  43 57
APT56_RS26165 5857253 .. 5857274 - -11.5  -4.94972   CACCAGAATTAAAAA           GCCCGGCTC CTTG GAGTCGGGC            TTTTGCATTGTGGGG 100 231
APT56_RS26155 5855512 .. 5855540 - -19.5  -3.94333   AAGGGAAAACGGAAA        TGGCGGGCGCCCG CAA CGAGCGCCCGCCG        CAAGGCGGGGCGGAG 100 50
        prfA 5854407 .. 5854423 -  -3.5  -2.94747   CCAGCCGATCAGATA              TCGTCGC CCA GCGCCGC              CAGCTGCTCGGCCTG  42 2
APT56_RS26145 5853521 .. 5853535 -    -7  -3.86346   GCAGCCGGTTACAAA               TCGCCG GCC CGGCGT               CAACCGCGCCCCGGC  64 25
APT56_RS26140 5853069 .. 5853086 -  -2.6  -3.05463   AGTCGCCGCATGGAA             TCAGGC CGTGGC GCCGGA              TTGCTCCAGCAGGGT  42 8
APT56_RS26135 5852438 .. 5852470 - -11.4   -5.0916   CGCGCAAGACAAAAA     CGAAAACGCCCCGGGA AAT CCCCGGGGCGTTT--G     ACCTTCACGGCCCGT 100 56
APT56_RS26125 NONE
APT56_RS26120 5849523 .. 5849562 - -10.6  -2.71144   CATGTTCGCCAAGGA  CGACCTGGAGGCGGCGCGC AAG GCGCGCGACCGGCAGGT-G  CCGATGGGCCGCATG  56 264
APT56_RS26095 5844598 .. 5844646 -  -2.9  -3.44051   GGTGCACTACCAGAA GACCTACCGCGCGC-CCGCGCC GGCGCA GGCCTGACACGCGCAGCCGGCC TCGATGCCATCGAGG  49 61
APT56_RS26075 5839215 .. 5839250 -   -11  -2.72344   CCCCATCCTCAACCA    GGGCAGCCTGCACGTGC TCA GC-CGCGCCGGCCGCCA    CATCTCGCCGGCCGC  59 455
APT56_RS26060 5836702 .. 5836719 - -14.1   -5.4833   CCACGCAAGAAAAAA             GCCGCCC ACAC GGGCGGC              TTTTCACTTGCCGGA 100 54
APT56_RS26000 5823986 .. 5824021 - -21.2  -3.74077   CGCCAGACACCCAAA    CGCCAAAGAAGGCCGC CCGC GCGGCCGCCTTTGGCG     ACCCCGCAAGACCTT 100 308
APT56_RS25985 5821737 .. 5821762 - -16.9  -5.61596   ACGCGCAGAAAAAAA         GCGCCGGTCCGT TCA ACGG-CCGGCGC         TTTTCACTTACGCGG 100 55
APT56_RS25950 5816583 .. 5816607 -  -9.9  -3.39449   GTTCACCAAGAGCAA          TCCGGCCGGCG CGC CGCAGACCGAA          CGCATCATCAACAGC  65 229
APT56_RS25925 5809064 .. 5809105 - -14.1  -4.24002   GCGTAAAGTCGAAAA TCATTGAATTCCATTCATT TAAA AATGAATGGAATTCAATAT  ATCGAAATAAAACTC 100 193
APT56_RS25920 NONE
APT56_RS25905 5804347 .. 5804366 -  -9.2  -3.31144   CGTGCATCCGCACAA            CGACCGCG GCAC CGCGGTGG             CCTCGGCGGAACTGG  64 245
APT56_RS25895 5802238 .. 5802258 -  -5.4  -3.57619   AAACGGTAAATAATA            CGCTGG TTCCGGCCG CCAGCG            GCCGCAGGCCGCCCC  55 59
APT56_RS25890 5800279 .. 5800297 - -13.1  -5.78622   GCACGCCAAAAAAAA             GCGGCGC ACGCG GCGCCGC             TTTTTCACTGCATCG 100 53
APT56_RS25885 5798958 .. 5799015 -  -3.2  -3.05844   TGTTCGACGCCAAGA CCGGCGAGCTGCT-GGGCGCGCACA TCATCCACC CGGAGGCGTCCGAGCTGATCGCCGG CTACGGCGTGGCGGC  43 218
APT56_RS25825 5786019 .. 5786029 -  -2.4  -3.33696   TTTTGCCGGAATCAA                 GGGC GCG GCCG                 CTTCAGACTTTACGC  45 35
APT56_RS25820 5784730 .. 5784746 -    -3  -3.92075   ACCGCCATGTACAAA             CCGTATC ACCT GAT-CGG              GCTGGAACTGGGCAT  56 413
APT56_RS25800 5781594 .. 5781625 -    -5  -3.66803   CCGGAATAGGCGAAA      CTCTGCG-CGCCGGC GGA GCTGGCGGCGCACAT      GCAGACGAGGGAAAG  55 108
APT56_RS25795 5781096 .. 5781122 -  -8.6  -3.16564   GGCGCATGCCAGCAA         GGCCAGCGCC CATCCGC GGCGCCGGCA         AGGCGACGCGCTTAC  57 37
APT56_RS25790 NONE
APT56_RS25785 NONE
APT56_RS25780 NONE
APT56_RS25775 5775924 .. 5775942 -  -6.7  -3.17051   GGTCTACGAGGAAGA            CGTGGCGG TCTA CCGCCA-G             ACGGTGCTGAACGCG  50 423
APT56_RS25755 5768739 .. 5768793 -  -5.5  -2.70932   TTTGCCGGCGAATTA CCGGCGAATTGCCCGCGTGGCGGACCC ACG GGGCCCGCCACCTTGGCCA--CGGCGA TTCGCCTAGAGGGCG  46 31
APT56_RS25750 5767431 .. 5767466 -  -7.4  -3.73414   TAGATTACACCCAAA    TGCGCGGGCGGCCG GTTGTTCT CAGCCGCCCGGACG     CCAGGCGCCAGGCCG  65 51
APT56_RS25745 5766367 .. 5766377 -  -4.6  -2.70932   TGCCGGCGGCAATCA                 CGCG TAT CGCA                 CACCATTTAATTGTA  44 188
APT56_RS25740 5765431 .. 5765464 - -12.3  -3.57462   CAGGCGATTCGGAAA     GGACTGGGCGCGATC GATC GACGGCGCCCGGCCC      TTACCTCGAATACGC  77 26
APT56_RS25710 NONE
APT56_RS25705 NONE
APT56_RS25695 5754334 .. 5754344 -  -2.4  -3.54475   GCCCCGACTATAGAA                 TCGC GTC GCGC                 CCCCGCCGTAGAACC  47 50
APT56_RS25690 5753227 .. 5753252 -  -7.7  -3.11316   GTACTACTTAAGATA         TATCTTACGAT ATAG ATCGTACGATA          CACAGACCCGATTGC  55 172
APT56_RS25685 5752247 .. 5752271 -  -2.1  -3.71527   CTCCAATGAGGGAAA         CGGGATCAGG CACAGT CCTTA-CCCG          TGATTTCCTCGGTGG  53 6
APT56_RS25680 5751337 .. 5751368 -  -8.6  -2.90075   GCTGGCGCAAGGATA      GGCG-CGCCAATGGC CGG GCCACGGCCGTCGCC      TGCGGGAATCGCGCC  55 68
APT56_RS25670 5749121 .. 5749134 -  -2.3  -3.54029   CGCGATCAACGACAA               GGGAG CCGC CTCCG                GGCCGACCTTCGCCC  50 382
APT56_RS25645 5740292 .. 5740309 -  -8.3  -2.79831   CTAACCGCTATTACA             GGGGCGC GGCG GCGGCCC              TTCAACTGATTATTT  55 35
APT56_RS25640 5738822 .. 5738844 -  -3.2  -3.60971   ACTGGAAGCCGGAAA           CGCCTATGTG ATC CCCAAGGGCG           CCTGGCATACCGTCA  51 156
APT56_RS25630 NONE
APT56_RS25625 NONE
APT56_RS25620 5737065 .. 5737077 -  -5.5  -3.04322   TGCAATGCGCCAACA                CCATG TCG CACGG                GCGCGGCGCGCCAGT  48 55
APT56_RS25615 5735013 .. 5735032 -  -4.2  -3.79113   ATGGCTGCACAAGAA            CCTGCGGCA CTA CACCGC-GG            CCGCCAACCTGTGCG  55 416
APT56_RS25605 5733697 .. 5733725 -  -3.9  -5.60993   GCTCTCATAAAAAAA      CCCGC-GGG--TGC AAGT GCAATCCCAGCGGG       CCGATATGGTGCGGG 100 63
APT56_RS25600 NONE
APT56_RS25595 NONE
APT56_RS25590 5732238 .. 5732273 - -12.4  -3.00498   TATACCTCACATAGA    TCCGCCTCCGGCCCGC TTGC GCGGGCCGGACACGTC     GTCAAGACCCCTTCC  68 27
APT56_RS25585 NONE
APT56_RS25580 5730511 .. 5730558 -  -5.3  -2.62616   GCATGCCGCACACGA TGCGCG-GCACCCGCCGGGAGC TGTCG ACACCCCGCGGCTTCGCGCGCG GCGCGCCGCCATGGC  43 42
APT56_RS25575 NONE
APT56_RS25570 NONE
APT56_RS25565 5728237 .. 5728252 - -11.8  -5.07652   GCCGGCAAAAGAAAA              GGCGCC CGCG GGCGCC               TGGTTCCTGATTCGA 100 51
APT56_RS25560 5724922 .. 5724940 -    -3   -3.4404   AGGCACATTCAAATA             GATGGACA AGC TGGCCGTC             GTAGAACCCGAATAT  49 76
APT56_RS25555 NONE
APT56_RS25550 5723463 .. 5723495 - -27.9  -2.52464   TTGCCGCTGAAGGCA      GGCATACCGGACGGG AAA CCCGTCCGGTATGCC      TGGACTGCCGGCTCG 100 43
APT56_RS25545 5722019 .. 5722075 -  -8.8  -2.78495   GCATCATCAACATCA GCTCGGTCGCCGGCCGCATGGGCGTGC CGCTGC GCACGCCC-TACG-CCGCC-ACCAAGT GGGGCGTGGTCGGCC  52 404
APT56_RS25525 5717635 .. 5717648 -  -5.2  -4.33274   GGCATATTACGAAAA               CGCC CCTTCC GGCG                CATCAATGGAAGTGA  70 28
APT56_RS25520 NONE
APT56_RS25515 NONE
APT56_RS25510 5713901 .. 5713939 -  -7.8  -2.81725   AGCGGACATGAATGA   TGCGGCGGCGGGCGGCGC GAT ACGCCGCCTGCCGTGGGC   CTATTTGGCGGGAGT  52 26
APT56_RS25505 5712920 .. 5712946 - -20.8  -2.53876   CGTCAGGTCAAGGGA         CCGTCGCCGGCG CAA CGCCGGCGGCGG         TTTTTTTACGTCCAG 100 203
APT56_RS25490 5710501 .. 5710522 -  -4.3  -3.01712   TGGCGTGCGCGAACA           CGTCGGC ATGCCGCG GCCGGCG            GGCCATGACTCACAC  43 285
APT56_RS25480 NONE
APT56_RS25475 5709488 .. 5709511 -   -11   -4.7173   CACCAGATTGAAAAA          GCCGCTCCAGC AAC GC-AGAGCGGC          TTTTTGTTTGCGCGG 100 43
APT56_RS25440 5699548 .. 5699562 -  -5.6  -4.34402   CCCGTCATATCAAAA               CCCACA CCG CGCGGG               TGGCAGACATCATGC  69 192
APT56_RS25430 5696424 .. 5696451 -  -9.9  -3.60792   TGCTCAAGCGGGAAA        CCGAGCGTCGGC AGTTG GCCGA-ACTCGG        CCTTATGTCTTCCCG  68 258
APT56_RS25425 5691663 .. 5691688 -  -9.7  -4.20136   AGCTCCAAAACGAAA         GGCCTTTCACC AATG AGTGAAGGGCC          TTTTCTTTGGTTCTG  76 346
APT56_RS25400 5686520 .. 5686539 -  -3.4  -3.90744   CGCGCGCGCAAACAA            GCCCAGAC CGCC GCCCCGGC             CTCAATCAAAAAGGG  56 27
APT56_RS25395 5684312 .. 5684329 - -14.1  -4.87291   CAGGCCAATGAAAAA             GGCGCCC TCGC GGGCGCC              CTTTTCCTGCCTTCG 100 52
APT56_RS25390 5683833 .. 5683845 -  -3.4  -3.34398   TCCGCCTGGTAAAGA                TCGA GCGCG TCGA                CGCTCATGGCCGGCC  47 29
APT56_RS25385 5683440 .. 5683458 -  -5.8  -3.14132   GGGGGTTTCCAGGAA             GCGGGCAG GAT CAGCCCGG             CAATTCCCAGCGCTT  49 17
APT56_RS25380 5681567 .. 5681589 -  -2.7  -3.63515   CGTGACGGTCAACAA          CGGCCGC-CAA TCG TCGCGCGGC-G          TGGAGCTGTCGGCGG  50 490
APT56_RS25335 5670482 .. 5670508 -  -2.9   -2.7035   TTGAGCGAGAGACTA        GC-ACCGATAGG GCGT CCCGCCGGTCGC         GGCGGCATATGGATT  40 127
APT56_RS25330 5669879 .. 5669893 -  -2.1  -5.62219   AAGACAGTAAAAAAA              GTG-GC CAGA GCGCAC               GTTCATTGCGCAGGC 100 41
APT56_RS25325 5668787 .. 5668798 -  -3.6  -3.53811   GCCAGGCTTTGTAAA                GCCG AACT CGAC                 ACTCAAGAAATCGAC  49 46
APT56_RS25320 5665334 .. 5665356 -  -6.9  -5.08824   CCCCGACCCAAAAAA           GCGCCGCAC TCTGT GTACGTCGC           ACATGCGAAAAATCC  91 89
APT56_RS25315 5664598 .. 5664634 - -17.3  -5.48514   ATGAAGAAACAAAAA    GACGGTCGCGACGGG GGATAGG CCCGCCGCGACCGTG    ACCCACGCGCCCGAG 100 67
APT56_RS25310 NONE
APT56_RS25305 NONE
APT56_RS25300 5659760 .. 5659773 -  -9.5  -2.52464   CCGCCGCTGAAGTGA               GCCGG CCCG CCGGC                GGGGCCTGTCAGCCA  55 170
APT56_RS25290 NONE
APT56_RS25285 5656194 .. 5656209 -  -3.2  -3.03124   GCCTAGGCCGGAACA              CGCG CCAAGCAT CGCG               GTTACCCCCCCTTCT  42 27
APT56_RS25280 5654879 .. 5654906 -  -9.8  -3.43071   TCGCAGATCAATCAA        TAGCCGCCCGCA GGCA CGCAGGCGACCA         TCCATAGACATAAAC  65 157
APT56_RS25275 NONE
APT56_RS25270 5652006 .. 5652025 -  -5.7  -3.44686   CTTAACCGAAGAACA            GGTTGCC TTAGAC GACAACC             GAAGGGCGGGAAGGA  55 49
APT56_RS25265 5651369 .. 5651401 - -11.3  -3.77303   CATCCAAAGACAGAA      GCGGCCAACACTGTC CAC GACAGTATTGGCTTC      ACGGTCGTGGCACGA  77 41
APT56_RS25240 5647164 .. 5647206 - -14.1  -3.53012   TTTTTTTGGTGGAAA TCCC-CGCGGGCAAGCGCCGG CGC CCGGCGGCAGCCC-CGAGGGA CCGGCCCCGCCGCCG  81 57
APT56_RS25215 5643209 .. 5643239 -  -7.5  -3.91897   TCCCGGATCGAGAAA      GCCCGGCGCGGCGGC CGC GCC-CCG-GTCGGAC      AGGCCAACCGATTGC  67 80
APT56_RS25210 5641903 .. 5641932 -  -5.5  -2.86676   CGGATTAAGGGAAAT       GGCGCGGTTCATG CGAT CACGCCGCGCGCC        CGCAGCGCTTCGCGC  47 4
APT56_RS25205 5640869 .. 5640887 - -13.8  -3.14132   CTGTTTTTGTATGAA             GCGCCCGA GGG CCGGGCGC             GTGGTGTGAAGCAAA  76 43
APT56_RS25200 5639763 .. 5639782 -  -7.8  -3.09516   CGTTCTACCATTGAA            CTACACCC GCTC GGGTGTCG             TGCCCCGGCGCAAGA  55 95
APT56_RS25195 5639618 .. 5639643 - -12.6  -2.62983   TTGACGCGGATATCA         CGCCGCGCACA CCGGC TG-GCGCGGCG         GCCCATGCGAGCATG  64 80
APT56_RS25185 NONE
APT56_RS25180 5637668 .. 5637686 -    -9  -4.66163   ATTCTTATCCAAAAA             GAATGAAA TAT TTTCATTC             CCATAATGCTGAAAA  88 124
APT56_RS25175 NONE
APT56_RS25170 5634948 .. 5634981 -  -8.7  -3.67597   GCGTCGACCGAAGAA     CGGCTGGCCGCGATGG AAG CCAGTGCCGCC-GCCG     GGCAGGCGGTGCACC  63 428
APT56_RS25155 NONE
APT56_RS25150 5631580 .. 5631590 -  -2.4  -3.33744   CGTCCTTTGAAAAAT                 GCCG CAT CGGT                 CTCACAACGCGAATG  45 27
APT56_RS25145 5630745 .. 5630780 - -15.4  -2.89742   GGGAAGCCTGAGACA    CGCGGCCATGGCGGGCG CCG CGCCCGCCAT-GCCCTG    TCACCCCAGGTATTC  80 26
APT56_RS25140 5629037 .. 5629066 -  -4.1  -4.37886   CCATGTGCCACAAAA       TGCAATCCGGCCCG CAC CAGGCCGGG-CGCG       ACCGCCCGCGCCTGC  69 75
APT56_RS25135 5627052 .. 5627081 -  -7.7  -3.57144   GCTTCGACCTGGAAA       CCCCCGCCGTG TACTACAC CTCGGCGGCGG        CGCGCAGCGCCCACG  60 371
APT56_RS25110 NONE
APT56_RS25105 5620058 .. 5620074 -  -5.7  -2.63631   CCAACCCCTACAGCA              GCGGCGG CTT CCGCGAC              GCCGGCCCGAACTAT  45 37
APT56_RS25080 5615021 .. 5615038 -  -4.7  -2.73124   GCTGACGCTGGAAAT             GCGCAGC GACA GCAACGC              GGTGCTGGACGCCTT  43 386
APT56_RS25065 5611746 .. 5611763 -  -9.1  -3.10344   CCGGGACGGAACAGA             CCTAGGG ATAT CCCCAGG              CGGCGGCAGGGGGAC  60 43
APT56_RS25060 NONE
APT56_RS25055 5608805 .. 5608820 - -11.8  -2.79133   GAAGGGCCGATGAGA              CGCCGC GATC GCGGCG               CCGTCTTGCGGCGCC  66 242
APT56_RS25050 5607975 .. 5607992 -  -5.5  -3.43071   CCTCAGACTAATTAA             CAGGGGA ACGA TCTCCTG              AATGCGCGGATCGGG  55 92
APT56_RS25045 NONE
APT56_RS25040 NONE
APT56_RS25035 5604501 .. 5604529 -  -7.3  -3.54424   GCGCATGGGCGGAAA        GCGCCGCCCGC TCACGAC GCATGCAGCGC        GGTCACCGCCCATTT  60 8
APT56_RS25030 NONE
        tcuB NONE
APT56_RS25020 5600212 .. 5600226 -  -5.6  -3.14132   TCCGCCTCGCACCAA               GCCCAG ACC CTGGCC               GATCGCCCGGTCTAC  47 497
APT56_RS24995 5593542 .. 5593555 -  -6.7  -3.37796   GGGGATTACTGATAA               CCCTT GGGG AAGGG                ATCGGGCTTGATCAG  55 2
APT56_RS24990 NONE
APT56_RS24985 NONE
APT56_RS24980 NONE
APT56_RS24975 NONE
APT56_RS24970 5588707 .. 5588719 -  -4.7  -2.91383   AGCGGTAGTCATAGA                GCGGC ATG GCGGC                TCCTCACAGGTCTTT  45 29
APT56_RS24965 5588264 .. 5588275 -  -2.2  -2.50935   AGGCGATGGAGCAAG                GCAT GGCG ACGC                 TGGGCAAGCTGATGG  37 131
APT56_RS24910 5573797 .. 5573814 -  -4.7  -2.92192   GGTGACGCAAGGATA             CAGGGAG GCCG CACCCCG              CGCATCATGACGGCG  46 84
APT56_RS24905 5571885 .. 5571901 -  -4.5  -4.25056   TAGTGTAGCAATAAA              TTATCGT TTA ACAATAA              TTTTTTATCACGATA  66 296
APT56_RS24895 NONE
APT56_RS24890 5570884 .. 5570914 -  -6.6  -3.60431   AAAAGGACGTGGAAA       GCCGGCGCCTGGCC GCA AACCGGGCGCTGGA       ACGGAAAGCCACAAA  59 53
APT56_RS24885 5570290 .. 5570302 -  -2.6  -3.61506   GCACCTCGAAAAAAT                CCGC CGGGT GCAG                CCCGACCTGGTGTTC  50 194
APT56_RS24870 5566815 .. 5566872 - -19.8  -3.14931   GTCACGCCGGAGGAA CCG-GCGCCCGTGGCGGGCGCGACACGC GCCG GCGCGCCGCGGCC-CCAGGCGCGCGCGG CCGGCGCGGCCGCGG  90 65
APT56_RS24860 5564756 .. 5564786 -  -6.7  -4.15044   CTCTCCCGCAAGAAA      CCAGGGGTGCGCGC CGCG GCGCGC-CAGCCGG       ACAGCCGGCAGCGCC  68 187
APT56_RS24855 5563858 .. 5563871 -  -3.7   -4.0896   AAAGCGGGGCGAAAA               GCGGC GAAG GCCGT                AATAGTAATCGCTGC  62 94
APT56_RS24850 5563041 .. 5563058 - -14.1  -4.62069   GCGCCATGCGAAAAA             GCCCGCC GATC GGCGGGC              TTTTTTCATGCGGCG 100 69
APT56_RS24835 NONE
APT56_RS24830 NONE
APT56_RS24825 5553504 .. 5553525 -    -3  -3.06831   CGAATGGGGACGGAA           CGGC-ATCG GATAT CAATCGCCG           AAGAAGGTACGGTAC  43 16
         dcd 5552825 .. 5552852 - -19.8  -3.05384   GGGGCGTTCAGGCAA        GGCGGGCGCGCC GGGC GGCGCCCCCGCC         GCTGGGCCGTCAGGT 100 35
APT56_RS24810 5550184 .. 5550216 -  -9.8  -2.78384   CCCCCGCGGACGACA     GCGCGATGTTCGGCG TGTT CGCCGGAGA-CGCGC      TGGCCGGCATCATCG  56 369
APT56_RS24800 5549248 .. 5549265 -  -6.9  -4.66163   ACTTCTAGTGAAAAA             CCGTCTG ATGA CAGGCGG              GCGCGAGGTTCCCGC  82 207
APT56_RS24795 5546900 .. 5546917 -  -3.3  -3.12327   CGGCGACATCGAACA             TCAGGAC TCCG GACCCGA              TCAGTCTTCGATCAG  43 26
APT56_RS24790 5545633 .. 5545649 -  -9.3   -3.8709   AAAGCGTTGGACAAA              GCGGGCG TCG CGCCCGG              GAAGGAATGCGGCCG  73 74
APT56_RS24785 NONE
APT56_RS24780 5543835 .. 5543856 -  -7.3  -3.56643   GTGACAGCGCCGAAA           GCATACCGCG AAA CGCGAT-TGC           GTTGTTGATCCGTGA  63 71
        gcvT NONE
APT56_RS24770 NONE
APT56_RS24765 5538864 .. 5538883 - -13.6  -4.70319   CGAGCAAAAGCAAAA            CCCCCATC GTGC GATGGGGG             TTTTTTTTGCCTGTC 100 91
APT56_RS24710 5522236 .. 5522255 - -11.4  -3.55622   TCCAATGGCGCGAAA            CGGC-GCGC GAG GCGCAGCCG            GAGGAAAACGGCTAC  71 148
APT56_RS24685 5516523 .. 5516546 - -16.8  -6.06723   TCGCTTAAAAAAAAA          GCCCGAGATC GTGA GATCTCGGGC           TAAATCCACCAAAGG 100 444
APT56_RS24680 5515029 .. 5515062 -   -16  -2.85896   GTGATGAATGAATGA     CCGGGC-CCCCGGCG GAGAT CGCCGGGGCGCCCAA     CACTTAATCGGCTCG  80 29
APT56_RS24675 NONE
APT56_RS24670 5512653 .. 5512665 -  -4.8  -3.51232   GTGCTTTCAAATCAA                CGCA GGAAT TGCG                TGTACCAGGGCATCG  53 9
APT56_RS24665 NONE
APT56_RS24660 5510136 .. 5510147 -  -2.2  -3.16564   TGGTCACCGCAGCAA                CG-GC ATG GCGCG                CGGCCTAGCGGCCCG  42 30
APT56_RS24655 NONE
APT56_RS24650 NONE
APT56_RS24645 NONE
APT56_RS24640 5504680 .. 5504709 - -13.5  -4.55128   AGGTCGAAATGAAAA       GCGGCGCCGCCGCG ATC CGC-GTGACGCCGC       AAGGACTGGACGGCG 100 86
APT56_RS24620 5499025 .. 5499070 -  -3.7  -3.73072   AATTCGCTCAGCAAA GTCATAGACGCCGCACGGAGAG GAT CGCGCCGGGCCGCGCCCG-GAC GCTGTTCAGGGATGG  56 71
APT56_RS24615 NONE
APT56_RS24610 NONE
APT56_RS24605 5495437 .. 5495449 -  -4.7  -3.60818   CGAAAATTCGTCAAA                TCCGG CGG CCGGG                ACGGTTACCCCCAGG  55 109
APT56_RS24600 5494446 .. 5494493 -  -9.2  -3.01712   CGCTGGGGCTGAACA CGCCGCCGGTGG-GCA--CCACG CAGTT CGTGGGCTGCGCCATCGGCGGAG TCTCGGTCGGCACGG  55 99
APT56_RS24570 5489036 .. 5489082 -  -9.9  -3.60296   GATTTCGACGCCAAA GCGCAACGCGAG-GCGCCCGGC TACC GCCGCGCGCGCTCGCGAATCGG CGTCATTGCGCGCGG  68 28
APT56_RS24565 5486882 .. 5486892 -  -8.2  -3.73775   TTGAGCGGGATCAAA                 CCGG CAC CCGG                 GCCAGACGGGGCGAA  67 42
APT56_RS24560 5485454 .. 5485489 - -12.5  -3.09516   TTGCTCACGACCGAA    CAGTCGCG-CGCCGCC AAGCA GGCGCCGGCGCGGCTG    TCGCGCAGCAACTTC  66 351
APT56_RS24545 5481820 .. 5481833 -  -4.5  -3.55122   GATTACCGAAACCAA               CCTGGC CGC GCC-GG               ACGACTTCTACGAAG  54 176
APT56_RS24520 5476026 .. 5476071 -  -8.1  -3.21099   GGCCGCCAGCACGAA CGCCAGCAT-GGCCAGCAGCGC CCA GCGCATCCAGCCCAGGCTGCCG CGCAACGCTGCCGTC  57 39
APT56_RS24515 5475279 .. 5475304 -  -8.9  -5.00884   ATTCTCCGTAAAAAA         GCGGCGGC-GCG ATC CGCGGCCACCGG         CCTTGCATGCCGCGC 100 216
APT56_RS24510 5473493 .. 5473520 -    -2  -3.66166   TCGGGAAAAAAGACA        GACGGGTCGAT TTTAGCG ATC-ACCCGGC        CCCGCGAGCGCCCGA  50 166
         ipk NONE
APT56_RS24500 5472392 .. 5472434 -  -4.2  -5.79595   CCGGAAAATAAAAAA GCTGCTGAACCCGGGCCAGT GTCTT ACAGGC--GTGTTCAACAGC TTTGTTATGTATTCG 100 43
APT56_RS24495 5471259 .. 5471278 -  -4.2  -5.93252   TCCAAAAACAAAAAA            TGGCGAAG CGGA CTTCACCG             GTTAAAGACACGGCG 100 113
APT56_RS24490 5470550 .. 5470577 - -15.6  -5.37593   GTTTAAACCAAAAAA        CCCTGCGCATGC AAAT GCACACGCAGGG         TTTCGGGCACAAGCC 100 70
APT56_RS24485 NONE
APT56_RS24480 NONE
        ychF 5467881 .. 5467922 - -23.1  -3.60971   AGGCGAAGTTCTAAA TGGAAGGGGCAGGCCCTTG ATGC CAAGGGCCTGCCCCATTCA  CATTCATGTAGCGCG 100 65
APT56_RS24445 NONE
APT56_RS24440 5457492 .. 5457510 -  -6.6   -4.1891   GTGTTCGAATACAAA             CGCAGGCC GGC GGCCTGAA             GCAGCCGCTTCAGGC  68 98
APT56_RS24415 5453214 .. 5453257 - -35.5  -3.54424   TGCGACCGCCGCAAA CACCGCGCCCCACGCCTGC GATGCA GCAGGCGTGGGGCGCGGTG TTTTCAGCGCCGGGC 100 72
APT56_RS24375 NONE
APT56_RS24370 NONE
APT56_RS24365 5443352 .. 5443367 -  -2.5  -3.56704   CCCGCACCAAAGGAA              CGGAA AGGTAG CTCCG               AAAGAAAGGAGACCG  50 147
APT56_RS24360 5442118 .. 5442141 - -10.2  -2.87683   ACAGCGCGGGATAGA          CCGCGCGCGA GCGT TCGCGCATGG           ACGGGGAATGAGGGG  60 169
APT56_RS24355 NONE
APT56_RS24350 5440766 .. 5440785 -   -10  -2.71144   GACCTTCCCGAACGA            GCTGGCCGC GGT GCG-CCAGC            GCATCGGCGACGCGG  56 310
APT56_RS24330 5436401 .. 5436414 -  -3.7  -4.21194   CGCCATCATCGAAAA               GGGCC GGGT GGCCT                GGAGCGGCACCTCGC  63 116
APT56_RS24275 5426338 .. 5426375 -  -7.6  -2.71483   ACACGCCCTGAACCA   GGCGCCGCGTCCGTCAC TCGCT GCGCTGGACGCGA-GCC   TTTCCCGCTCCTTTT  51 44
APT56_RS24240 5418576 .. 5418609 - -14.5  -4.02762   TGAATCAAAAGACAA     GTCCCGGCCCGCCGC CAGG ACGGAAGGCCGGAAC      GACGCAACACTATAG  95 134
APT56_RS24235 5417461 .. 5417496 -  -8.8  -3.15544   GCGTACCGGCAGCAA    CGGCAGCGTGGCCAGC TGGA ACTGGCCGCGTCGGCG     GACATGCTGGCCGCG  56 498
APT56_RS24225 NONE
APT56_RS24220 NONE
APT56_RS24215 NONE
APT56_RS24210 5410218 .. 5410230 -  -4.7  -3.55622   GCGAACCGCGGGAAA                TCGGC AAG GCCGT                GGCGTTCCTCGCCTC  54 151
APT56_RS24200 5407946 .. 5407966 - -13.3  -2.52742   ACGCCGGCAGAATAC            CCGATCGCG CCG CGCGATCGA            TAGTGTTAAAACCGG  67 525
APT56_RS24190 NONE
APT56_RS24185 5405117 .. 5405132 -  -5.4   -2.7535   TCGGTGAACACATCA              GGCTTG GATG CAAACC               GTGTGCCAACCAGGA  44 127
APT56_RS24180 5404311 .. 5404321 -  -3.2  -4.10925   AGACATCTTCGAAAA                 TCCC GGG GGAA                 TGAGGGGCAGGCCGC  60 77
APT56_RS24175 NONE
APT56_RS24170 NONE
APT56_RS24165 NONE
APT56_RS24160 5400844 .. 5400862 -  -8.1  -3.34344   TCAGCGTCGAACGAA             TGGCCCA GGCGG CGGGCCA             GGCGCCCCGCACCTT  55 319
APT56_RS24150 5398577 .. 5398624 -    -7  -3.12351   CGCCGGCAGATTCAA CAGCCGCGTGGTCACCCTGTC CGTGGGC GACACGGCCACC-CACGGCTA CCGCGACCTGGTCAC  53 225
APT56_RS24135 5394987 .. 5395008 -   -13  -5.44119   TTGATGGCAAAAAAA           GCGCACCC GCCGGG GGGTGCGC            CGCAAAACGGTCAGG 100 36
APT56_RS24130 NONE
APT56_RS24125 5393670 .. 5393681 -  -7.2  -3.05844   CGGCCGACTTCAACA                GCGC CTTG GCGC                 AGCGCGTGCGCACGG  52 135
APT56_RS24085 5384596 .. 5384616 -  -3.9  -3.16971   GCATGATACAGGCAA            GTCCGCA GGCACGG TGCGGCC            GGCGCGCCATCGCCG  45 122
APT56_RS24080 5383970 .. 5383984 -  -2.7  -2.79796   CTGTAGTTCATGACA               GGCAC CTCTT GAGCC               GGTCCATGCCGCGCC  40 3
APT56_RS24075 5383235 .. 5383261 - -10.8  -3.13867   CGATCCAGGAAGACA         TGGGGCACTCCG CAA CGGAATACCCCC         CTATACGCGGCCCGG  63 58
APT56_RS24070 NONE
APT56_RS24065 5381552 .. 5381571 -  -2.7  -2.87211   ACGTGTCGGGATATA            CGGGCAC GGCGAG GCGCCGG             ATGCATAAGTGAAAA  40 44
APT56_RS24060 NONE
APT56_RS24055 NONE
APT56_RS24050 NONE
APT56_RS24045 5377272 .. 5377284 -  -9.1  -3.28924   CAGGTTGGCCCAGAA                GCGCA TCA TGCGC                CCTCCCGCACCCAGC  62 18
APT56_RS24040 NONE
APT56_RS24035 NONE
APT56_RS24030 NONE
APT56_RS24025 5374181 .. 5374193 -  -6.2  -3.04144   CGGTGATCCCGAACA                GGCG CCCGC CGCC                TTCATGGAAGGCTTC  48 209
APT56_RS24005 5371660 .. 5371693 -  -4.5  -2.76315   CGAACAGTGCCAAAG     GCGTCAATGATACCG GCGG CGCTGTCATCCACGC      GTACAGGGCTACGGG  42 34
APT56_RS24000 5370678 .. 5370689 -  -7.2  -3.95986   GCGAACGCAAGGAAA                GCGC GCAG GCGC                 TGGCGGCGCGGATGA  67 191
APT56_RS23975 5366972 .. 5366986 -    -7  -4.25104   CTGTCGCTACGAAAA               TGGCGC GGC GCGCCG               TGCTAGTCGTCTTCG  72 28
APT56_RS23970 NONE
APT56_RS23965 5362891 .. 5362905 -  -5.6  -3.05384   CGCGCCGTCAGGCAA               GGCGCT CAT AGCGCT               TCTCCAGTTGCTGCG  49 3
APT56_RS23960 5361765 .. 5361798 - -13.1  -3.04144   GCGTCATCGGCAACA     TCGGCATGGCGCGGCC CGA GGCCG-GCGAGGCCGA     GGTGCGGGCGGCGGC  66 464
APT56_RS23940 NONE
APT56_RS23935 5355771 .. 5355781 -  -8.2  -2.71144   GACGCCTGCGAATGA                 GGCC GCC GGCC                 GCCCCGTTCACGGGA  53 33
APT56_RS23920 5353039 .. 5353058 - -16.4  -3.01745   GCGGCAACAACGACA            CGGGCGCC TTGC GGCGCCCG             AAGTTCGAGGGACAG  85 246
APT56_RS23915 5351080 .. 5351101 -  -3.6  -5.40072   CCTCCTTGAAAAAAA           CGTCCGCGC CAGCC GCGCTG-CG           AGCCCGGACCCAGCC  93 71
APT56_RS23910 NONE
APT56_RS23905 5350250 .. 5350273 -  -5.9  -2.78384   CCGGCCGCCAGGACA          CGCCGGACGC GCGGG GCG-CCGGCC          CGTTGCTACCAGTAG  46 31
APT56_RS23900 5349132 .. 5349144 -  -6.9  -3.73107   CTATTAAAGCCCAAA                GCCGC CGC GCGAC                GCCGCCGGAACCCGG  62 83
APT56_RS23895 NONE
APT56_RS23890 5347294 .. 5347323 -  -5.5  -4.20367   CCCGGGAAGAAATAA       GGCGCGGGCCTTGG CCA CCCTGGC-CGCGTC       CGCCCCGTCGCGCCA  70 68
APT56_RS23880 NONE
APT56_RS23875 NONE
APT56_RS23870 5343619 .. 5343659 -  -2.4  -3.61715   CACCCGCGCCAACAA GGTCGCCGGG-CGC-GAGGC GGT GCTGCTGCATCCCGACGACG CCGCCGAGCGCGGCA  50 446
APT56_RS23860 5340464 .. 5340492 - -13.2  -3.04144   CGTGGATCGTCAATA       TGCATCCGGCGGC TATT GCCGCCGGA-ACA        GGGGAATCAGGCCGC  71 32
APT56_RS23855 5338958 .. 5338990 - -11.8  -3.14132   GGCGCGCCGGATGAA      CGCGGCGCGCTGCC TGGCG GGCGGCGCGCTGCT      GTCGGGCATCGGCTT  64 389
APT56_RS23845 5336980 .. 5337001 -  -2.1  -3.60792   GCGTGAATGGTGAAA           GCGCGATTG TTGC CAGCCTCGC            CGCGCGCAGCAAGGC  50 84
APT56_RS23840 5335509 .. 5335520 -  -5.8  -3.04144   CCTGTACGCCGAACA                CTGC GGCC GCAG                 CTACGAGGACGTCGA  48 189
APT56_RS23815 5330968 .. 5330993 -  -7.5  -5.77853   AAGGGCGAAAAAAAA         CCGACGCGGCAC GAG GCGG-GCGTCGG         CATGGCGGCCGGCAG 100 111
APT56_RS23810 5330236 .. 5330251 -  -3.2  -2.52623   CTCCCCTTAGAACAG              CGGC AGGTTCAG GCCG               AGCAGGTTGCGGAAG  39 1
APT56_RS23805 5328535 .. 5328555 -   -14  -3.54543   ACGCAGGTGTGCAAA            GGCCTGCC GCTGG GGCAGGCC            TTGCAAGACTATGAA  78 169
APT56_RS23795 5326106 .. 5326123 -  -4.8  -3.85698   GCCGCGCTCGACAAA             CTCGGC CATCGC GCCAAG              CGCGCCGGAGGTTGA  60 427
        dkgB 5323799 .. 5323819 -  -2.6  -3.17571   AATCTCTGAAGGGAA           CGA-TTACG TTAC CGCAACTCG            GTTGGCGTTTTGCTG  44 103
APT56_RS23770 5322653 .. 5322690 - -16.1  -2.91383   ACGTGTATTGAGAGA   CAGGGGCCGGGCCGTCC GGTT GGGCGGCCCGGGCCGCG    CCTGCGCGCGGGCGC  80 53
APT56_RS23760 NONE
APT56_RS23755 NONE
APT56_RS23750 5313678 .. 5313704 -  -7.8  -3.01712   GGCCTGGCTGGAACA         GGCGCTGCGCAC GCC GTTCGCCGGGCC         GACCGTGGCCATCAC  52 284
APT56_RS23740 5312033 .. 5312066 - -10.1  -3.54129   GACAGCGCCGTGAAA     GCGGACGCGTCGAAG CGGG CCGCGGCGCGTGCGC      GCGGCCTCAGTGTGT  69 63
APT56_RS23735 5309067 .. 5309088 -  -7.1  -3.29144   GTACGCCCGCGACAA           GGCGCCGCC GCAT GGCGGCTTC            CGCGTGGTGACAGGG  55 432
APT56_RS23720 5305967 .. 5305990 -    -8  -2.52464   TCGCGGGCCAACCCA          CGCTGTGGCG CGGA CGCAGCAGCG           CGGTGGATGGCTTCA  48 72
APT56_RS23710 NONE
APT56_RS23700 5302866 .. 5302890 -  -7.7  -3.13403   GGGCCTGGATCAATA          CGCCATGGCGG CCC CGGCCACGCCG          GCGCAGATCCTGACG  53 390
APT56_RS23685 5299421 .. 5299435 -  -8.5  -2.70932   GTCGCCGTCCAACGA               CCGCC TGACC GGCGG               CGACGCCAACATGAA  52 176
APT56_RS23645 5290105 .. 5290125 - -13.9  -3.21416   GATGGCGATCAGCAA            CGCGCCCAG CAC CAGGGCGCG            CGCCCAATTGAACGA  78 81
APT56_RS23640 5289343 .. 5289364 -  -9.3  -3.15544   GGCTATGCCGACGAA           CCCGGCCAG GGCG CCGGCCTGG            GCGCCAACCTGAACC  56 448
APT56_RS23620 5285979 .. 5286033 - -12.8  -3.05384   CCCGCGGGCACTGAA CGGCGCCC--GCC-GCGATAGCCCCCC CGCC GGGCGGCGACCGCCGGCAAGGGCGCGG GCATCCGCGCGGCGC  72 92
APT56_RS23600 5282798 .. 5282818 - -19.7  -4.72272   CTCGGCGATGAAAAA            GGGCCCGCC ATG GGCGGGCCC            TCTGCTCTTGCCGGG 100 42
APT56_RS23590 5281044 .. 5281068 - -14.9  -3.34398   GTTGCCCTGGAAAGA          CGCGGCGCCAC GCG GCGGCGCGGCG          GACCGGGCGCGCCGC  84 42
APT56_RS23580 5278893 .. 5278912 -  -7.1  -3.85698   GCCGGCGGCTAGAAA            GCGC-CGC TTGCG GCGTGCGC            CGGCGTCACTGCGCC  64 31
APT56_RS23565 5276435 .. 5276463 -    -8  -3.63515   CGGCATCCGCAAGAA       CCTGGCGC-GCGG CAAA CCGCTGCCCCCGG        GCATCGCCAAGAAGA  60 214
APT56_RS23555 5274830 .. 5274849 -  -6.3  -3.53811   TGGAGGGGGTGGAAA            CGCCGGC GCAACT GGCGGCG             CTGGAATCGAGCGCC  57 150
APT56_RS23545 NONE
APT56_RS23540 NONE
APT56_RS23535 5270616 .. 5270631 -  -6.1  -3.83026   CGGTTCGACAGGAAA              GTCCC TTCGGG GGGAC               GCGGCGCGACGCGCC  62 114
APT56_RS23530 5267818 .. 5267849 -  -6.5  -3.36327   CTACCGCATCGACAA     GGCCGTGCTGGCGCG CTGC CGCGCC-GC-CGAAC      GCCACCTGCTGGCCG  52 362
APT56_RS23505 5262285 .. 5262308 - -10.9  -3.13403   CGGCGGCGAGCAATA          CGCCGGCCG TTGACG CGTCCGGCG           CCTCAGCGCGCCGCG  66 28
APT56_RS23495 5260764 .. 5260784 -  -5.3  -3.40522   AGGCGTGGAGCACAA            GCCGTGTGC GCC GCAAACGGT            GCAGGCCATGCTGAT  52 121
APT56_RS23455 NONE
APT56_RS23450 5253378 .. 5253409 -    -8  -4.25104   CGCCGGGCAGGAAAA      CGGGGAAT-GGCGGA TAA TCCGGCTATTTCCCG      CCTTTCGGGCGGCGG  75 449
APT56_RS23435 5251423 .. 5251456 -  -8.9  -2.62192   GTTTACTCAATCAAG     GCGATTGAGGCAACGC AAG GCCTTGGCTCAA-CGC     GCGAAACGGCGTCGC  53 19
APT56_RS23430 5250952 .. 5250970 - -11.6  -3.01712   CGGCGGCCGGCAACA             CGCCGGCG GCC CGCTGGCG             CCCACGGATTCACGC  65 208
APT56_RS23425 5249848 .. 5249863 -  -5.4  -2.71681   GAACCTCGGCAAGGA              CGGCCTG ATC CAGGC-G              ATGGGCATCTCGTTC  43 277
APT56_RS23410 5247403 .. 5247454 -   -15  -3.01712   TGGTCGGCGCCAACA TCGGCGCCGGCCAGCCCGAACGGGC GCT GCGCAT-CGCGCTGACCGGCGGCGC CATGGCGTTCGCGCT  74 439
APT56_RS23400 NONE
APT56_RS23375 5239853 .. 5239882 - -23.7   -5.7946   CCGCCAATAAAAAAA       CGCCCGCGTCATC ATGC GATGACGCGGGCG        TTTTACCTTGCGGCC 100 60
APT56_RS23355 5235915 .. 5235935 -  -5.3   -4.2717   ACCACCCGAGGAAAA            GCAGCCGCT GGC AGGGGTTGC            CTGTGCGTATGCGAA  68 98
APT56_RS23350 5234976 .. 5234993 -  -4.7  -3.06183   CGCAGGCGGACTCAA             GCGCGAC GCTT GCCGCCC              TGCGGGCGCAATGGC  46 441
APT56_RS23275 5221818 .. 5221846 - -10.9  -3.88703   CGCCACAAAGAAATA        GCCGCCCGGCC GCCCGAA GCCCGGGCAGC        CCCCTCCGGGGGCAG  79 74
APT56_RS23255 5218089 .. 5218114 -  -8.9  -3.78775   GGGGGCAGCAGCAAA         TGGCGTTCCTG CCTG CAGGCGCGCCA          TTTGGTCCAGCAGAA  67 49
APT56_RS23250 5217321 .. 5217346 - -11.1  -3.77832   GCGGAAAGTGAAGAA         CCG-CGGCGGCA TGC TGCCGCTGGCGG         CGTGGCGCTGACGGC  77 47
APT56_RS23240 NONE
APT56_RS23235 5213645 .. 5213657 -  -9.1  -3.28712   CCTGCGGCGCGACAA                GCGCA TCG TGCGC                ATGCACGCCGAGCCG  59 398
APT56_RS23225 5211638 .. 5211671 -  -5.9  -2.74523   CCACGGCCAACAGCA     TGCGCCAGCTGC-TCA GGG TGACGCCGGTGGCGCT     GTCCGACGCCTGGGC  46 136
APT56_RS23215 5209045 .. 5209066 -  -5.8  -2.73875   GGCTCTCTAAGATGA           GCGCTCAT TCAACC AGGAGCGC            ATCATGTCCGCCAAG  46 429
APT56_RS23190 5204623 .. 5204651 -    -6  -3.61268   GACCGAAGCCGCAAA       GGGCGCAGGCCACC CTT GGTGGC-TG-GACC       TGGGCGTGGTCAAGA  57 474
APT56_RS23175 NONE
APT56_RS23170 5201957 .. 5201974 -  -2.5  -3.09635   ACGGCGACGATTCAA             GCCTGGC CGAC GCGCGGC              AGGATCGTCACCCAA  42 4
APT56_RS23165 5199193 .. 5199233 - -14.6  -4.35524   GGCCGAAATGGAAAA  TCAGGACTGCCGCCGCTG TCGCG CAGCGGCGGCAGCGCGGG  TCAGTATTGATAAGT 100 26
APT56_RS23160 NONE
APT56_RS23155 NONE
APT56_RS23150 5196289 .. 5196302 -  -4.5  -2.52516   GCGGCCAGCATCAAC               CGTGCC TCC GGC-CG               CGCGCCAGCTGCCAC  41 7
APT56_RS23145 5195451 .. 5195466 - -11.8  -4.33274   GGTAGATGAGGAAAA              GGCGGC CACG GCCGCC               GCGATGCCCCATTTT  95 58
APT56_RS23140 5194649 .. 5194672 - -19.6  -3.65827   CAATGCGTATGCAAA          GACCGGCCGC CCGC GCGGCCGGTC           TTTGCGGGCAACGCA 100 290
APT56_RS23130 5191993 .. 5192025 -  -3.3  -2.93723   TCCCCAGCAACCACA      CCATCATCATCGCCA CGC TGGCGTTCACGCTGA      TCTTCGACCGGCGTT  42 342
APT56_RS23075 NONE
APT56_RS23070 NONE
APT56_RS23065 5174341 .. 5174372 -  -6.4  -2.53894   ACGAGGATGACGAAG      GGGTAGTCCGGAGC GAAC GCTCCGGACCGCAA       TCGTAGCCCCGCACC  47 68
APT56_RS23060 5174128 .. 5174145 - -12.7  -4.62783   GATGTATGCCAAAAA             CGGCTGC CCGC GCAGCCG              TTTTAGGCGGGCCCC 100 28
APT56_RS23030 NONE
APT56_RS23025 5168300 .. 5168315 -    -6  -3.28712   CGGGTTCGTGGACAA              CGGCCG CCTG CTGCCG               ACGCTGGCGGTGGAG  52 144
APT56_RS22985 NONE
APT56_RS22980 NONE
APT56_RS22975 5158164 .. 5158194 -   -16  -2.60763   GCCACAGGCGACAAC       GCTGGCCGGCCAGC TGC GCCGGCCGCCCGGC       CCGGCGCCGGCGGTT  77 44
APT56_RS22950 NONE
APT56_RS22945 5154118 .. 5154132 -  -5.7  -3.62096   TGGCAGGAGCCTAAA               CGCTA ACCGA TAGCG               AGCAATCCGACCAGC  57 13
APT56_RS22940 5153374 .. 5153393 - -16.4  -3.39327   TCGGGACATGCAGAA            GCCCGGCC CCCC GGCCGGGC             TTTTTCATGCCCGCC  90 30
APT56_RS22900 5142849 .. 5142871 -  -6.1  -2.92026   CATGGGAACATCATA           GCCCGGCGC ACACG GCGGCGCGC           CTAGGAAAATGCCTC  48 26
APT56_RS22895 5141731 .. 5141751 -  -3.1  -4.07568   GTTGCCGGTCGAAAA            CGGGCGCTG GGT CAACCACCG            ATGTAGCTCATCTCG  60 16
APT56_RS22890 5140793 .. 5140805 -  -2.6  -3.30441   CATGATCGGCGACAA                GCCG GTGGT CAGC                CTGCCGGGCAATCCG  45 346
APT56_RS22860 5134071 .. 5134104 - -13.2  -2.52464   TCTCCGGGCAAGGGA    CGG-CCGCC-GGACGC GGCC GCGTCCTGGCGAACCG     CCGGGGTTCACTTCA  67 33
APT56_RS22855 5132873 .. 5132918 - -18.9  -3.61356   ACGACGCACGCTAAA GCGTATGCCAGGACCGGCTGC CCGC GCAGCCGGTCCTGGCGGGCGA CGCAAACTCTCTCCC 100 272
APT56_RS22845 NONE
APT56_RS22840 5129262 .. 5129292 -  -2.2  -2.71144   CATCCTGTTCAAGCA       GGTCGCGCGCGCCG GCA CCGCGTTCGCGGGC       GGGTTGCTGCTGGCG  39 360
APT56_RS22790 5123295 .. 5123310 -  -4.6  -3.85698   CGCTTCGGCGACAAA              TCGGCG CTGG CGCTGA               TCGGCCTGGCGCTGA  60 163
APT56_RS22760 5116785 .. 5116805 -   -14   -4.4078   TGCCGCCAATGAAAA            TGGCCGCC TGCAT GGCGGCCA            TTTTCATTGAACTCC 100 64
APT56_RS22715 NONE
APT56_RS22710 5106749 .. 5106760 -  -3.6  -2.66882   AAAAACGTTATACGA                CGGG ATCC CCCA                 GGTGCGACAGGAAGG  40 6
APT56_RS22705 5105460 .. 5105517 - -10.5  -4.57353   CGTGAGCATACAAAA CCTGGCACGGTTGCGGGCGGCGGCGCGC GCCGA ACGCGC-GCCGGCCGCC-CC-CGCGAGG GGTCTACTGTTGCAG  89 29
APT56_RS22700 NONE
         upp 5103140 .. 5103193 - -18.7  -3.34398   GGCGCGCCGCAAAGA CTGGCGGCGTAG-CGGCCGGCGACGG CTG CCGCGGGCGCCCGGCCACGCCGCCGG GGACGACTCAATCGG  93 33
APT56_RS22685 NONE
APT56_RS22680 NONE
APT56_RS22675 5097925 .. 5097935 -  -8.2  -4.04319   CCAGAAATCCAGAAA                 GCGC CGG GCGC                 TGTCCGCGCACGGCT  72 156
APT56_RS22670 5097128 .. 5097159 -    -5  -2.90054   GACGAAACCATCATA      CCAGCCGTCCCG CGCGGGTC CAGGCCGGCTTG       CTACCGTGTGCTACT  45 36
APT56_RS22665 5096709 .. 5096761 - -27.8  -3.65522   GACCCATGGCAAGAA GGA-CACCGGGCGGGCGA-GCCGGCA TGA CGCCGGCGCCGCCCGCCCGGAGGTCC CGCCTTGTCAGCGGC 100 33
APT56_RS22660 NONE
APT56_RS22655 5095890 .. 5095909 -   -15  -5.40072   GCCCCCCCAAAAAAA            TCCCGCCG GAGA CGGCGGGA             TTTTTTCTTGGGCGG 100 56
APT56_RS22645 5093352 .. 5093368 - -12.3  -3.66178   GGCGGCAATCGGAAA              GTCGCCA TCG TGGCGAC              TTTCCAGCGAGGACC  77 48
APT56_RS22635 5090968 .. 5091011 -  -7.9  -3.54424   GCGGACGGGGCGAAA CGTTCCCTGCGGGCGCCGC CGGGGC GCACCGCCCGCAAGCCCCG GGCGCGCCGCCCATC  60 52
APT56_RS22630 NONE
APT56_RS22625 NONE
APT56_RS22620 5086497 .. 5086509 -  -6.9  -4.07568   CCCGCGGCTGGAAAA                GCGGG TGG CCCAC                TGGCAGCGTATCGCG  66 444
APT56_RS22605 NONE
        gapA 5082157 .. 5082202 - -22.7  -3.34013   GAGTTGGCGAACGAA GGGGACGAACCCGCTTTCCGC CGTG GCGGAAAACCTGTTCGTCCCC TTCGGTTCGACAGCG 100 45
APT56_RS22595 5080887 .. 5080904 - -12.7  -5.93252   CCCAAAAAGAAAAAA             CCGCTCC CAAA GGAGCGG              CTTTTCATCGAGCCA 100 51
APT56_RS22585 5077174 .. 5077189 -    -6  -3.01712   CCGGGCCGCTCAAGA              CCCGCG CGGC CTCGGG               CATCGCCGAATTCGA  48 301
APT56_RS22540 5068482 .. 5068501 -  -2.7  -2.82516   TTCTTCATGATCAGA            CCCCCAG GTGGCG CCGCGGG             TTGAACGGCAGATCT  40 1
APT56_RS22535 NONE
APT56_RS22530 5067177 .. 5067195 -    -8  -3.14468   GCCCATTACATCGAA             GGCCGGCG CAT CGCCGATC             CCGCCGAGCTGCGCC  53 280
APT56_RS22510 5062934 .. 5062950 -  -2.9  -2.68436   AATCAATGGAAAGAG              GCGGC CAACTAT ACCGC              AGCGTCCGGCGACGG  40 17
APT56_RS22505 NONE
APT56_RS22500 5061306 .. 5061342 -    -8  -3.90744   CGGTTCGTGAAAGAA   TG-GCGCTCCTCCG-GCG CCA CGCCCGGCGGAACACGCA   TGACGCAGCAAGATG  67 354
APT56_RS22470 5057852 .. 5057867 -  -2.5  -3.68351   TGCGTAGCATGGAAA              GCTCC GGGTAG GGAAC               GGGCGGGGTCAGGCC  50 34
APT56_RS22465 5056810 .. 5056866 - -20.3   -5.0916   TCCGGAATAGAAAAA TCGGATG-GACGCGGCGCCGGCGCTTG AGGGG CAAGCGCCAGCGCCGCGTGGCATC-GT TACTGCTTGGCGGTC 100 25
APT56_RS22460 5055966 .. 5055991 - -17.5  -2.71712   CCGGCCGGTTGAAAT         GCGGGGCGCGC CTCG GCGCGCCCCGG          GCTCAGATCAGCGCG  84 28
APT56_RS22440 5051423 .. 5051448 -  -8.9  -3.61398   GCGTGTCGGTAACAA         CGGCG-CGCCGG AAG CCGCCACCGCCG         AACTGCTGGATATCG  63 125
APT56_RS22415 NONE
APT56_RS22410 NONE
APT56_RS22405 NONE
APT56_RS22400 NONE
        phnK NONE
APT56_RS22390 NONE
APT56_RS22385 NONE
APT56_RS22380 5041514 .. 5041547 -    -3  -4.17048   CGCTCCGGAAAATAA     GGGAGACGGGCCGCG CAAGC CGCGGCC-ACCTCGT     CATTGCCCATTTAAC  60 94
APT56_RS22375 5040650 .. 5040680 - -10.2  -3.75665   GCATATGCCATGAAA       TCGCCACGCCCGCG CCA CGCGCTCGCGGCGG       CCGTCCTGATGGCCG  71 405
APT56_RS22360 5037928 .. 5037950 - -10.4  -2.55074   TCCAACCGCAATTGA           GGCGAGGGGC GGC GACCCGCGCC           ATATCGCGCTGGCCG  58 51
APT56_RS22350 5035591 .. 5035624 -  -2.4  -4.20868   CCGTGAAAAGAAGAA    TGA-CTGCGGGCAGGC TCAG GCCTGCCT-CGGCTCA     ACGCCGCACCAGTCG  63 7
APT56_RS22345 NONE
APT56_RS22340 NONE
APT56_RS22335 NONE
APT56_RS22330 NONE
APT56_RS22325 5029049 .. 5029075 - -11.4  -3.01712   CCCTTCCCGGTAATA         CGGGGACGGCCG AGA CGGCCTCCCCCC         TCCTGCTCCTGCCCT  65 39
APT56_RS22320 5027737 .. 5027759 - -17.7  -5.27335   GCGCGCAAAGAAAAA           GGCGGGCCC TTCGC GGGCCCGCC           TTTTTGCTGCCCGCC 100 68
APT56_RS22310 5026162 .. 5026180 - -13.1  -6.06723   GCGCGGAAAAAAAAA             CCGCCCG GTTCA CGGGCGG             CTCTTGGGGGCGCGG 100 49
APT56_RS22305 5025184 .. 5025200 -  -6.5  -3.53012   GGCGGTGCCGCGAAA              CCCGGTA TTT TACCCGG              CGCCGGCGCCACCCC  57 40
APT56_RS22300 NONE
APT56_RS22295 NONE
APT56_RS22290 5022116 .. 5022150 - -12.7  -3.10894   ACCATCACCACCGAA     GCGCGGCTGCGGGCC GAGCT GGCGCGCATCCGCGA     GCAGGACTACGCGGT  66 247
APT56_RS22265 5017709 .. 5017729 - -15.4  -5.07652   GTGCCGAAAACAAAA            CGGCCCGC GCAAG GCGGGCCG            TTCGTGCTCAGGTCA 100 47
APT56_RS22260 5016418 .. 5016428 -  -3.2  -4.19678   TTAGATTTGAATAAA                 TCGC TAT ACGA                 TACGATCGTGTCAAA  60 331
APT56_RS22255 NONE
APT56_RS22250 NONE
APT56_RS22245 NONE
        glnQ 5012968 .. 5012989 -  -2.9  -3.60627   GTAGCGTAGCGCAAA           CCGGGTAGA GCCA TTTACGCGG            CTCGGCATGGAACCA  51 110
APT56_RS22235 5010961 .. 5010971 -  -4.6  -3.05384   CCGCGCCTGACGGAA                 CGGC TGG GCCA                 TGGCGGCCAGCAACT  46 381
APT56_RS22190 5002518 .. 5002537 - -16.4  -4.93877   CCCCACCAAACAAAA            GGCCGCCC CAAC GGGCGGCC             CTGGCGGTCGGCGAA 100 52
APT56_RS22185 NONE
APT56_RS22180 4999135 .. 4999146 -  -2.2  -3.59979   GGGCCTTAGTTGAAA                CGAA CGTA CTCG                 AAGTTCACGGGCTGG  50 4
APT56_RS22175 NONE
APT56_RS22170 4997155 .. 4997180 - -23.3  -4.39998   TACCCATATAAGAAA         GGCCCGCCCGG TTTC CCGGGCGGGCC          TTCAATGTCGCTGGG 100 170
APT56_RS22165 4995289 .. 4995315 -    -3  -3.25604   TCACGGAATGAAAAG        CCAGCCACGTA TTGGGG TA-GTGGCGGG         AAATGGGTTTACGCG  45 93
APT56_RS22160 4993401 .. 4993423 -  -5.5  -3.65201   CAACATGCGCAAGAA          CGGC-GTGAC GATC GACACCGCCG           TGCCGATGCCGGTGC  54 193
APT56_RS22135 4985848 .. 4985865 -  -2.6  -3.57106   TGGAACGGAAATCAA             GGCATC AAGAGA GGTGCC              CGGCGGCGGAGAGCG  50 128
APT56_RS22130 4984813 .. 4984844 -    -2  -4.28432   AAGGCGAAGGCAAAA      GTGTAGGCACGCGG ACGG CGGCGCGCAAACGC       TGGCGTCAACCACGC  63 31
APT56_RS22125 4984121 .. 4984139 -    -8  -3.05816   GGATCGCCGACTGAA             GCGCCCGA GGG CCGGGCGG             CCGGTTCTTGATGTT  55 181
APT56_RS22120 4983370 .. 4983391 - -17.3  -3.18264   CTTGTCATGCAGCAA           GGCGCCTGC CGCG GCAGGCGCC            TTTTTTTGTGGCGGC  91 141
APT56_RS22110 4981585 .. 4981603 - -14.6  -4.72272   TCCGGCCACGAAAAA             GCCCGATC GTC GATCGGGC             TTTTTTACGTCTGGC 100 105
APT56_RS22095 NONE
APT56_RS22090 NONE
APT56_RS22085 4976291 .. 4976315 - -15.7  -5.42862   AGATGCGGAAAAAAA          CGGCGCGCG CGCGCGT CGCGCGCCG          CTGCCCGCATGATAT 100 61
APT56_RS22080 4975672 .. 4975688 -  -3.8  -3.99678   ATGGCGACAAGCAAA              TTGATT GATTA AATCAA              CAATAGGGGTAAAAA  60 66
APT56_RS22075 NONE
APT56_RS22070 4973686 .. 4973711 - -10.4  -2.71712   GTGGTGCGGGGAAAG         GCC-CCGGGGC TCATG GCCCCGATGGC         TAGATCGCGCCCTGC  59 25
APT56_RS22065 4972631 .. 4972646 -  -7.5  -3.10715   GTCAGGATCAGCCAA              GGGCG ACCACG CGCCC               TCGCATCCAGCCAGA  55 47
APT56_RS22060 NONE
APT56_RS22055 4971714 .. 4971736 -  -4.8  -3.53343   AACTGGTGGCGCAAA           CGCGCG AAGCGCTCAGG CGCGCG           GCGCTGCTGGCGGAG  53 124
APT56_RS22045 4969141 .. 4969160 -  -5.6  -4.07568   TGGGCGGCGTGAAAA            CGCGGTAC GGAA GCACGGCG             TGGAATCGATTACCG  66 254
APT56_RS22040 NONE
APT56_RS22035 NONE
         ffs 4962426 .. 4962477 - -17.5  -3.84451   GGCGCGAAATGCAAA GGGGACGGAATCATCTTCC--GGGG AAAT CCCCTTGGAAGACAACCCCGTCCCC TTTGCGAAAACCGGT  95 39
APT56_RS22025 NONE
APT56_RS22020 4959646 .. 4959673 - -20.6  -3.59979   CTTGCGGACGGCAAA        GGCCG-CGCCGCC CGG GGCGGCGGCGGCC        GGAACGTTCGATCAG 100 37
        recR NONE
APT56_RS22010 NONE
APT56_RS22005 NONE
APT56_RS22000 NONE
APT56_RS21995 4954539 .. 4954583 - -12.8  -3.05963   ACCGGGACGGCAAGA GCGCGCTGATC-CGCGCCGACC TGC GCGCGGCGGGCGA-CAGCGCGC CGGTTCCGCAATGCC  66 392
APT56_RS21970 4949974 .. 4950023 - -15.5  -3.79906   CGACTGGCACAAGAA GGCCGCGGGCGCCAATTGGGTCG AAGC CGACCACGCCGGCGCGCGCGACC CCGGCGTGCAGTCGG  88 409
APT56_RS21960 NONE
        carB 4944769 .. 4944796 -  -9.9  -2.52464   TTTGTCCTCAATTCA        CTTGCGACGCGC CCTCT GCGCGCC-CAAG        CGCTATTTGTCCAAC  55 28
APT56_RS21950 4943794 .. 4943823 - -21.5  -5.14563   GGTCGGATGAAAAAA       GGCGGAGCCTCTC GCAA GAGAGGCCCCGCC        CGCTATGCTACAGGA 100 56
APT56_RS21945 4942859 .. 4942870 -  -5.8  -3.12668   CACGTGGACACTGAA                GTCG GCAA CGAC                 GTCGTGCCGTGATGA  49 146
APT56_RS21910 4934525 .. 4934545 -  -2.3  -3.64822   AGGCGCTGATCGAAA            CCTCGGTCG ATA CGGTCGCGG            CCGGCTCATCGCAGG  50 504
APT56_RS21900 4931974 .. 4931992 - -13.1  -4.82901   CGCCGGGCACAAAAA             CGGGCGC TTTAC GCGCCCG             ATCCACCATAGCGTT 100 113
APT56_RS21890 NONE
APT56_RS21885 4928539 .. 4928559 -  -2.5   -2.6342   CCGCAAAGGAAGTTA            TTCGCCATA AAT CAGGACGAA            AGACCTCAGACCGCG  38 31
APT56_RS21880 NONE
        glmM 4926306 .. 4926336 - -15.6  -4.07535   AATGTTCACAAACAA       TGGCCATTCATCGC AAA ACAATGAATGGCCA       TGTTCGATCGGGGCA  95 50
APT56_RS21870 4925184 .. 4925208 - -21.5  -4.17762   GAGTTCTGAAAACAA          CAAGGCCCCGG GAT CCGGGGCCTTG          TGCCGTGCGACGGCG 100 158
APT56_RS21860 4921329 .. 4921347 - -17.4  -4.55287   GGGATGGATAGAAAA             GGCCCCGC TGG GCGGGGCC             TTTCCGGTTCCGCGT 100 73
APT56_RS21855 NONE
APT56_RS21850 4918229 .. 4918254 -  -2.5  -2.87132   GGCGCCGGCGATACA         CGCCGTTCTGCA TAT TG-AGTACGGAG         ACAGCCATGATCTTT  40 57
APT56_RS21845 NONE
APT56_RS21840 4916486 .. 4916513 - -21.4  -2.90813   GACTGGCGGAAACGA        CAACGGCGCACC CGAA GGTGCGCCGTTG         TTTCATGCGGGATCC 100 96
APT56_RS21830 4914740 .. 4914791 -   -19  -3.83998   GGATCCGATATGAAA TGGC-GCAAAAAAACCCTCCCACGC GGC GCGTGAGAGGGTTTTTTTGCCGTGA ATCCTCCACAGGCCC 100 87
APT56_RS21825 NONE
APT56_RS21820 4912131 .. 4912165 -   -15  -2.70932   CGCGCTGCGCAACCA     CGGCAGCCTGACGC CGTCGTC ACGCCAGGCCGCCG     GACTGGGCGCCACCC  70 331
APT56_RS21800 4909482 .. 4909523 - -15.1  -2.52543   AGTTGTTCGAACTGA CGCTGGAGCCTGCCACCGGG TCT CCCATCGGCAGGC-CCACCG GACCGATCCAGTTCA  69 78
APT56_RS21775 4904943 .. 4904971 - -13.8  -3.63922   ACTCCCGGGAAAAGA       GCGGCGCGGCCGG CGAA CGGGCCGCGCC-C        GGTTCCTGGATTCTA  84 94
APT56_RS21770 4903503 .. 4903524 -  -8.6  -3.05816   GCACGTCCGATCGAA           GCCTGGCG ACGCGG CGCCTGGC            GCAAGTGTGCCGGCT  55 489
APT56_RS21750 4900531 .. 4900544 -  -9.5  -3.05384   CCGGTCGCGAGGCAA               GGCGG CGGG CCGCC                CTGCCCCAGCGGGTG  60 59
APT56_RS21725 4893873 .. 4893895 -  -5.5  -3.01924   CATCTCGGGCGAACA          CGGCTGAGCG CCCG CGC-CAGCGG           CGGCGGATTCCTCGC  48 43
APT56_RS21715 NONE
APT56_RS21710 4892409 .. 4892438 - -14.9  -2.78596   GATCCGCTGAGGATA       CGGAGCGGCCGGC GCGG GCCGGCCGCTCAC        CCCACGGTCGTTGAA  75 79
APT56_RS21680 NONE
APT56_RS21675 4885394 .. 4885406 -  -3.4  -4.67234   ATTTAATCCTAAAAA                TGAG GCGTT CTCA                ATATATTCATCAGCG  72 273
APT56_RS21670 4883614 .. 4883650 -   -18  -4.58663   AGTACCGCGGAAAAA   CA-CGGCCCGGGTGGGA AAGC TCCCGCCCGGGCCGACG    GGTTCGGACAAGACC 100 79
APT56_RS21665 4883255 .. 4883275 -  -3.8  -3.21099   GTCGGCCACGACGAA            CGGGCCGC GCAAG GCGTCCAG            GGCCGCCGACAGCGC  47 119
APT56_RS21660 NONE
APT56_RS21655 4882108 .. 4882119 -  -5.8  -2.71144   CACGTGCGCGAAGGA                CAGG AGGC CCTG                 TTCGAAGCCGGCGTG  46 269
APT56_RS21645 4881332 .. 4881342 -  -2.4  -3.55444   TCGGTATCGGTTAAA                 CGGG CGA CCGG                 TCCCATGAGACTGAG  47 265
APT56_RS21640 NONE
APT56_RS21635 4879930 .. 4879942 -  -9.1  -2.72511   CTGACTGCCGGAAAC                CGCGA TCG TCGCG                CACGATCGTCAGCCC  56 34
APT56_RS21620 4874564 .. 4874591 -  -6.8  -3.96327   ACGCTTGACGAGAAA        CGGCGCCGGCCC CGCG AGGCCGGCATGG         GCAATATCGTCAGGC  67 35
APT56_RS21610 4872698 .. 4872708 -  -6.8  -3.21912   CCGGGAAGCCATGAA                 GGTG CGT CACC                 ATGCGGGCCCGGCAA  54 377
APT56_RS21605 4869951 .. 4869986 -  -4.6  -3.38272   GATCAGTAGTCAGAA    GTCATGGACACAGGGA GGAG TCCCTCTACCCAAGCC     CACAACCGATCCCAG  51 90
APT56_RS21600 NONE
APT56_RS21595 4869664 .. 4869714 -  -7.6  -4.18197   AGCTGTCAGGTAAAA CCTAACTCATAAGACCGGGCAGAC ATT ATCCGCACGACGCTATGAGTTAGC CTCTACATCTCACCA  71 52
APT56_RS21590 4866380 .. 4866396 -  -2.3  -2.87881   TAACTGGTTGAGAGA              TTGTC TTTGAGG GACAA              CCGCTCCAATCTTGG  40 175
         rrf 4866206 .. 4866239 - -20.5  -3.51934   GGCTTTTCACAAAGA     CAAAACCCCACAGGC GCGA GCCTATGGGGTTTTG      AGCAATAAAAGCCTG 100 36
         rrf 4865919 .. 4865942 - -15.3  -5.38054   GGCCATAAAGAAAAA          CCCCGCAGG TATCAG CCTGCGGGG           TTTTCTTCTTGAATA 100 44
APT56_RS21565 4863037 .. 4863047 -  -2.4  -3.55444   CCGCCAGGCCTCAAA                 TGGC TGG GCCT                 GACCGTCAAGCAGGC  50 174
APT56_RS21545 4860484 .. 4860496 -  -6.2  -2.85056   ACGCTGAACGCAAAC                CGCC AATCG GGCG                CGCTGGTGGGCGTCG  47 190
APT56_RS21535 4858159 .. 4858183 -  -8.4  -3.14468   TTCGACGACATGGAA          GGCGGGCGGC GCAAT GCCGCCGGAC          CGTCAAACCTTAGCG  57 79
APT56_RS21530 4856237 .. 4856251 -  -2.7  -3.53811   CCTATCCGCTCGAAA               CGGCC GACAT GGACG               CGATGCTGCGCGAAG  50 501
APT56_RS21475 NONE
APT56_RS21470 4844455 .. 4844502 - -10.4  -4.43681   CATTTAACACTAAAA GCGGGCCCTGCCCACGCCGGGAT CTC AACCCGACTCAAGC-GGTCCCGC CACCGCGCCGCGCCT  88 12
APT56_RS21465 NONE
APT56_RS21460 4841475 .. 4841491 -    -3  -3.40073   ATGGCCACCAACGAA             CGCCATG CCCT CATG-CG              CCTGACACGCGAACT  47 232
APT56_RS21425 4833784 .. 4833798 -  -2.7  -4.92757   CTAGCAACAAGAAAA               TCCGC GGGGT GCGGG               GTCTTGCAAGACAGG  76 304
APT56_RS21420 4832597 .. 4832646 -   -15  -4.66833   TCCCAAGGGGAAAAA GTCCAAGCCGGCGGGTCGTCCCGG CAAG CCGGAACGGCCCGCCG-CC-GGAA AGGCGGCGCGGGTTA 100 38
APT56_RS21415 NONE
APT56_RS21410 4830105 .. 4830137 -  -6.1  -3.05343   CCGATATTCCGAATA      GTGGCGAACCGGCGA TCA TTGCCGGCCAGCCAT      CATATCCGGACTGGC  49 114
APT56_RS21405 NONE
APT56_RS21400 4828441 .. 4828459 - -11.6  -3.21416   GATGCGCACGACGAA             CCGGCGCG CCG CGCGCTGG             CGTGGTTCCACGACA  64 244
APT56_RS21350 4817004 .. 4817020 -  -9.3  -3.14132   CCGGCCCTGGACGAA              CTGGCGG CCA CCGCCTG              CGCCGGCCTGATCGC  56 494
APT56_RS21335 NONE
APT56_RS21330 4812999 .. 4813010 -  -5.8  -3.53012   TCCGGTCTGTGGAAA                CGGA CCAG TCCG                 ATGTTGTAAGGACTT  55 55
APT56_RS21325 NONE
APT56_RS21320 NONE
APT56_RS21315 NONE
APT56_RS21310 4808491 .. 4808516 -    -6  -5.00616   GCTCCTTGGAAAAAA         GTGGCCGGTC TGCGTG GACCGGCCTG          GCATGACGACGCTAC  87 37
APT56_RS21305 4806883 .. 4806893 -  -8.2  -2.90075   GCGCCTCCAACTACA                 CCGC GGT GCGG                 CTGTCCGAAGCGCTG  53 524
APT56_RS21295 4805147 .. 4805177 - -16.1  -4.90002   CAAGATAGAACAAAA       CCCCGCTCATGCC GGGTA GGCACGGGCGGGG       CCGAACGACTTGCGC 100 42
APT56_RS21290 NONE
APT56_RS21285 4803055 .. 4803085 - -13.3  -5.14563   GCCGGCATGAAAAAA      CCCGGCG-TGATCC CGAG GGATCCGCGCCGGG       TCTTGCGCCTGGCGG 100 57
APT56_RS21260 NONE
APT56_RS21255 NONE
APT56_RS21250 NONE
APT56_RS21245 4794078 .. 4794093 -  -3.4  -3.90291   ATCTCGGTAACGAAA              TATATA TAGG TATATA               ACGCTCGTCAATTTG  56 98
APT56_RS21240 4793254 .. 4793279 -  -5.3  -2.81464   GGATCACTCATCACA         GAC-CGCGTGGG CTA CCCGCCCGCGTC         CTCAAGGCTTCTGGA  45 27
APT56_RS21235 NONE
APT56_RS21230 4791440 .. 4791462 -  -4.6  -3.84246   CCGTCAACGACGAAA           TCCGGCTGCG CAT CGCTGGCGGC           CAGGTCATCACCGCC  60 446
APT56_RS21220 NONE
APT56_RS21215 NONE
APT56_RS21210 4788366 .. 4788384 -  -4.5  -4.63218   CGGGGGGGAAGAAAA             CAACGCC GATCA GACGTCG             GCCACTTCTTGCAGG  75 16
APT56_RS21205 4786834 .. 4786852 -   -16  -3.48269   CTCACCAAAGAGGAA             CGCAGCGC GTT GCGCTGCG             AGCCGCTTACGATTT  90 32
APT56_RS21200 NONE
APT56_RS21195 NONE
APT56_RS21190 NONE
APT56_RS21185 NONE
APT56_RS21180 NONE
        uvrC 4777979 .. 4777990 -  -7.2  -3.14132   CCGGGCGGCCACGAA                CCGG CCGT CCGG                 GCCCTATCCGCGCAG  51 29
APT56_RS21170 4777211 .. 4777228 -  -9.1  -3.14132   GGTTGTCTCCAGCAA             CGTCCGGC CGG GCCGG-CG             TTGTCCCTGTGGCGA  60 139
APT56_RS21165 4775801 .. 4775830 - -23.7  -3.53012   CCGCCGTCCCCCAAA       GCAGAACGCCGCC CGAG GGCGGCGTTCTGC        TTGCGGCCATGGCGC 100 53
APT56_RS21155 4773431 .. 4773446 -  -4.6  -3.09968   GACGCAATCCGAACA              CGCCGA CCTG TCGCCG               CCCCATGCCCCGCCG  47 194
APT56_RS21150 4772214 .. 4772247 - -10.9  -4.72272   GTGCGCCAGTAAAAA     CGATCGTCGTCCGCC CCGA GGCGAACGACGCCCT      TCACAGGCGGCGCTC 100 64
APT56_RS21140 4769668 .. 4769689 - -10.1  -5.00616   CGCCCGCCCAAAAAA           GAGGGTGCC CGAA GGCACCCTG            AATCCACCCTACAAC 100 80
APT56_RS21130 NONE
APT56_RS21125 NONE
APT56_RS21120 4766386 .. 4766441 -  -6.6  -3.14344   CACCTGCTCGATGAA GCCATCGACCTGCCCGCGCTCTACGAC CTG GACGGCC-GCGCCGGCAAGCTGATGGC GCTGCTGGCGGCCGA  50 431
APT56_RS21110 4764877 .. 4764935 -    -6  -3.21099   CCTGGGCACCATCAA CCACACCCTGCTCAGCCTGGA-GGCGCTGC GCC GCCGCGCCATCCCGG-T--GCTGGGCGTGA TCATGAGCGGCCCGC  50 239
APT56_RS21085 4760318 .. 4760358 -  -8.8  -3.15544   CTTGACCTGGATCAA GGCACGCCGGGCGATTTGC CCGG GCACGGCGCGCGGCG-GCC  TTGCAGACTTGCCGT  57 121
APT56_RS21080 NONE
APT56_RS21075 4758994 .. 4759018 -  -2.9  -2.71712   GGGTCGCGGGTAAAC         CGGGGTT-GA TGTGCG TCAAACCCCA          TTGCTCGCGCAGGGG  40 144
APT56_RS21070 NONE
APT56_RS21065 NONE
APT56_RS21060 NONE
APT56_RS21055 NONE
APT56_RS21050 NONE
APT56_RS21045 NONE
APT56_RS21040 4753149 .. 4753166 -  -3.3  -5.62288   GGAAGAAAAGAAAAA             GGCATCC CTCC GGACGCA              AGACACCGCGTAAGC 100 353
APT56_RS21030 NONE
APT56_RS21025 4749952 .. 4749976 - -14.9  -3.67976   GCGATGAATCGGAAA          GCACGGCCGCC TCA GGCCGCCGCGC          GCGCGGCGCGGTGCG  87 12
APT56_RS21020 NONE
APT56_RS21015 4747556 .. 4747600 -    -7  -3.46602   CTGGGCACAGGACAA CGGCGC-GGTGGTCTCGGC CATGTACC GCCAGGGCGACCAGCGCCG CCGCACCACCCAGCT  58 217
APT56_RS21000 4743790 .. 4743802 -  -4.7  -3.11634   GCGGAGACTACTTAA                TGCGG AAA CCGCG                CGATGCAAAAATGCA  47 72
APT56_RS20995 NONE
APT56_RS20990 NONE
APT56_RS20985 NONE
APT56_RS20980 NONE
APT56_RS20975 NONE
APT56_RS20970 4739064 .. 4739078 -  -7.8  -4.13767   GCCGTCAGGTGAAAA               CGGCTG CGG CAACCG               AGTGAAATTCTAACG  71 117
APT56_RS20965 4738132 .. 4738155 -  -6.7  -4.25104   TGCCGCCTATGAAAA          CAGCG-GCAC GTTCG GTGCGCGCCG          AGTCCAGTAAATACA  72 358
APT56_RS20960 NONE
APT56_RS20955 NONE
APT56_RS20950 4735415 .. 4735426 -  -7.2  -3.83205   AGGCGCTAGATGAAA                CCGG CCGC CCGG                 AACATGCATTCGTAG  64 4
APT56_RS20905 4724694 .. 4724706 -  -3.3  -3.39556   AAGTCTCGAACAACA                TGCGG CGT CAGCA                CCAGGCAGGCATCAG  47 62
APT56_RS20900 4723782 .. 4723798 -  -5.7  -3.56318   TGCCGAACAAGAAGA              CCGCGGG CAA CCTGCAG              TTGGCGGGCTCGTAC  57 394
APT56_RS20860 4714300 .. 4714315 -  -3.2  -3.16564   CCCGCATTGCACCAA              GGCG CTGTATCC CGCC               TGTGTCGCAAGACCG  43 93
APT56_RS20855 4713782 .. 4713808 - -19.4  -4.72272   CGGCTGCACGAAAAA         CGCCCCGCGAAG TGT CATCGCGGGGCG         TTGCGCTTGGCGTTG 100 48
APT56_RS20840 NONE
APT56_RS20835 4709598 .. 4709634 -  -7.7  -3.73534   CAATGTCATCAACAA    CCTGCCGGCCGGGCTGA TCG CCGGCTCGGTCGGCCAG    ATCGCCGACCTGCCG  64 347
APT56_RS20810 4703354 .. 4703368 -  -7.1  -3.29461   GAATTGGGCGCAGAA               GTCGG TGTCG CCGAC               CCGCGCCACGGTGAT  55 211
APT56_RS20800 4701989 .. 4702004 -  -6.8  -3.61398   GCCGGTGCTGAAGAA              CCGCCGC TTC GCG-CGG              CCCGAACTGGCCTGA  59 75
APT56_RS20780 4698097 .. 4698119 -  -4.7  -3.73224   GGAGCGGCGATGAAA           TCCTGTCCG GTGAG CGGTCAGGC           GGCGCGCGGCTTGCG  58 20
APT56_RS20775 4696269 .. 4696293 - -12.7  -2.52623   CTTTGCCGAGAATAT          CGCGCACGCCG GTC CGGTGGGCGCG          GGCCACCGCATGAAG  62 419
APT56_RS20755 4692882 .. 4692907 - -20.5  -3.09516   GCCGCCACCAGCGAA         GATCGGCGGCC CCTG GGCCGCCGATC          GCGCATGCGGGGCGG 100 54
APT56_RS20745 4690965 .. 4690990 - -16.2  -5.55769   TCGGACAAGAAAAAA         GGCGCCTAGG AATTAA CCTAGGCGCC          TGATTCAAAATAGAA 100 46
APT56_RS20740 4690364 .. 4690378 -  -7.1  -5.50499   GTAGATGGAAAAAAA               TGCCC GGCCA GGGCA               ATCGTCGGGTTCCTG 100 186
APT56_RS20735 NONE
APT56_RS20730 NONE
APT56_RS20725 4684950 .. 4684971 -  -3.5  -3.61398   CGGCGGGTTGAAGAA           TGGCCCCGG GACG CCACGGCCC            CGGGAATGTGGGAAT  51 40
APT56_RS20720 NONE
APT56_RS20715 NONE
APT56_RS20710 4669635 .. 4669674 - -11.5  -3.25896   CCATGACGCAGAAGA  TG-GCCGATATCGGCGTG CAGCC CATGCCGATGTCGGCGCA  GGAATTCCAGGCCTA  66 371
APT56_RS20700 4666738 .. 4666762 -  -2.7  -3.68222   CGCCAACCTGAACAA          CGTCATCAACA ACC TGTCGTCGGCG          CGCTCGCGCATCCTG  53 273
APT56_RS20685 4662440 .. 4662452 -  -2.6  -3.53811   CCTATGGCGTGGAAA                CGGC TGCCT ACCG                GAAACTGAGCGCCAC  50 147
APT56_RS20665 4654925 .. 4654948 -  -8.8  -4.25848   AATCGCCCAGGAAAA          TGACCTCGTC ATAG GGCGAGGCCA           GGGCGTTCGGTTGGG  77 337
APT56_RS20660 4652640 .. 4652682 - -15.5  -3.13403   CCGGCCCTACGAAGA CGCCGCCGCGCTGTGCCGCC GCAC GGCGGC-CAGCGCGACACCC GGCTAGAACCGGTAT  82 28
APT56_RS20605 4639437 .. 4639452 -    -6  -3.54459   GCAATTTTGCGCAAA              GCGGGC TCAC GCCCCC               TCCGCCAGGCCGCCC  55 16
APT56_RS20600 4638857 .. 4638888 - -10.7  -2.73483   ACGGGACCGCAAGCA      GCCGCTGCGCGGC TTCGAC ACCGCGCCGCTGC       TGGCGCCGTTCTCGG  59 221
APT56_RS20575 4633081 .. 4633120 -  -6.4  -2.77701   AGCCCAGCAACAGTA GCGCGCGGACGCCCG-GC ATCATG GCGCAGGCATCC-CGAGC  CGATAACCCCAGCCG  48 4
APT56_RS20570 4631998 .. 4632012 -  -3.4  -4.44667   GTCGGCAAGAAGAAA               GGCCCG ATC CAGGCG               CGCCTGCACGGCTAC  70 237
APT56_RS20540 4625976 .. 4625986 -  -8.2  -3.16564   GCGGCAGTGTAGCAA                 CCGC GCC GCGG                 CCCTATCGTCGGACG  57 28
APT56_RS20535 4625360 .. 4625376 -  -4.3  -3.10537   GACGGGAAAAGCACA              CCATAGC GCC GCCCTGG              CCCCATTGCCAGAGC  45 122
APT56_RS20530 4624662 .. 4624713 -  -5.8  -2.52543   ACGTCGCTCAACCGA CGTGACGCGGCCG-AC-GTGCCGGG ACGGG CCCGGCTCAATCCAGCC-CGCCGCG GCGCGCCACCAGGCC  45 8
APT56_RS20520 4622375 .. 4622415 -   -19  -4.10552   CCGATGAAAAAAAAT GTGCGCGCTCGCGC-GGCC TGCC GGCCCGCGCGAGCGCGAAA  GCGAATTCGAGGGGA 100 76
APT56_RS20515 NONE
APT56_RS20510 4621112 .. 4621139 -   -12  -3.03124   GGCCATCCTCGAACA        GTCGGCCAGCGT GCTG ACGCTGGCCAAG         ACGCGCGACTGGAAG  66 69
APT56_RS20490 4618050 .. 4618091 - -13.7  -3.70902   GCGGCCAGATGCAAA GCGGCGCCATGCCTGCCGC GTGGCG GCGGC-GGC-CGGCGGCGC GCGCCGCCGCATGAA  86 57
APT56_RS20485 4617265 .. 4617286 -  -5.7  -3.89524   AGGGGATGCCATAAA           TGAGGGGCT CCAA AGCCCCACG            GCGGGATGCCCCAGG  62 88
APT56_RS20480 NONE
APT56_RS20475 4615147 .. 4615174 -   -20  -5.03747   AAAGGCCCCAAAAAA        GGAAAAGGCCCC CGCA GGGGCCTTTTCC         GGGCCAGCCAGGCGA 100 65
APT56_RS20470 4614480 .. 4614522 - -10.5  -3.05384   GCCCGCGCTATGCAA GCTGGCC-GATGCGCGCAGC CTGG ACTGCGCCGATCCGGCCTGC GCGCGCCTGTCGGAC  59 305
APT56_RS20435 4606893 .. 4606933 - -14.7  -3.14132   GTCCGGCGCCAGCAA GCCGGACGCGCCGCCGCCC CCTTC AGGCCGCGGC-CG-CCGGC AACGCGGCCGGCAGG  80 7
APT56_RS20430 4605922 .. 4605937 -  -6.8  -3.14132   GCCGCGCGCCATCAA              CGCCCGC CAC GCG-GCG              CTTGCAGCGCCAGCA  51 6
APT56_RS20425 4605416 .. 4605472 - -15.8  -3.90316   ACGCCGCGAAAAAGA GGCC-GGCGGGCGCGAGACTACGGACA TTGC CGTCCGCAATCGCGCGCCTTCCCGACC CGGACCCGGATCAGG  93 36
APT56_RS20420 4604559 .. 4604605 - -12.2  -4.33907   GAGAAAGAGGTAAAA CCTCGACTGCGC-GCCGCGGGC CTGCC GCCCGCCGCCGCGCCTTCG-GG AGTTGGCTCTGATTT  95 422
APT56_RS20400 4601577 .. 4601596 - -10.6  -4.15044   GCCGCCGCCAAGAAA            GCCGCGCG CACC CGCGCCGC             CAACCGCGCCGCCGC  78 63
APT56_RS20390 4600638 .. 4600679 -    -5  -5.02074   TCAGCGCTCAAAAAA GGAGCAGCCGCGC-GGACGC GCCC GCGACCTGCACG-CCCCCCC TGTGCGGCGGGGACC  85 57
APT56_RS20375 4597853 .. 4597911 -  -8.1   -3.1247   ATCGGCGACAGCCAA GCCGCCGTGCGCAAGATCACGCTGCAC CGGCTGT ATGCCACGCG-CCGCGCGCA-GGCGGC GTGATGGCGCAGGCG  55 56
APT56_RS20340 4591533 .. 4591553 -  -6.9  -5.68438   TCATGAAAGAAAAAA            TCCCTTC GATAACG GAAGGGA            CTCATCTTCGGCCGG 100 115
APT56_RS20335 4590861 .. 4590874 -  -4.5  -2.52464   CGCCGCGTCAACGCA               GGTCGG CGG CCG-CC               AGCTTCCAGCCCAGT  41 4
APT56_RS20330 4589436 .. 4589453 - -14.1  -5.10497   AACGGACGCAAAAAA             GCCCGGG CAAG CCCGGGC              GCAGGCGGGGGAAGC 100 61
APT56_RS20325 NONE
APT56_RS20320 NONE
APT56_RS20315 NONE
APT56_RS20310 4584018 .. 4584031 -  -5.2  -3.53012   TGCGCCTTGCGGAAA               GGGC CGTCGC GCCC                TGCCGGTGTGTCAAG  53 118
APT56_RS20305 4583057 .. 4583084 - -19.2  -4.13767   CGCGCCATGCGAAAA        GGGCGTCCC-GCC ATT GGCCGGGACGCCC        TTTTTCATTGCCGGC 100 48
APT56_RS20295 4581037 .. 4581062 - -12.5  -5.47218   GGCGACGCAAAAAAA         TAGGGACGGGC ATCG GCCCGTCCCCT          GTCATCGGCCACCGG 100 72
APT56_RS20285 4579293 .. 4579311 - -13.1  -5.04385   GACACGCGCAAAAAA             GCCGGCC ACGGG GGCCGGC             TTCGGGAGCGCGTCG 100 57
APT56_RS20280 NONE
APT56_RS20275 4576621 .. 4576643 - -16.3  -4.10552   TCCGAGCAAAGCAAA           GGGCCGCGT TACCT ACGCGGCCC           TTTCTGTTTGCCCCC  95 61
APT56_RS20255 NONE
APT56_RS20250 NONE
APT56_RS20245 4570862 .. 4570902 - -11.9  -2.52464   CGGGGCGGGAAGTCA TGG-CGGCGGGCGCGGGCCG GAAG CGGC-CGCGGC-GCCGACCA AGGCCGGCGCGCGCG  64 47
APT56_RS20240 4569715 .. 4569734 -  -5.6  -2.57132   CGTTCTGGCCAGAAT            TCGACGGC GTCA GCCGCGGA             TTTCACTGCGCGCGG  45 74
APT56_RS20235 NONE
APT56_RS20230 4568062 .. 4568085 - -16.8  -5.68438   GCACCAAACAAAAAA          CCCGCAGAAC GTGA GTTCTGCGGG           TTTTTTTTAACTGCC 100 62
APT56_RS20215 NONE
APT56_RS20210 NONE
APT56_RS20205 4559218 .. 4559260 - -10.4  -3.17075   CCGCTGGTAAGGCAA GGCGCCGCGCCCGATGGC AACCCAG GCCATCCCGCCCGGCCCC GCGCCGGCGCGGCCC  63 44
APT56_RS20185 4551472 .. 4551518 -  -5.8  -3.86897   CTCACGGCGGACAAA GACTGCCGCGGTCTCGGGG GAATCGACGG CCGCTAGACCGCGAC-GCC CAGCATGCGCAGATA  62 11
APT56_RS20180 4551141 .. 4551168 -  -5.7  -3.34398   GCGCTCCGGTAAAGA        GGCAAGATTAT ATCAGA ATAATTTTGCC         GCGGCACTGCACTTG  53 119
APT56_RS20175 4550941 .. 4550965 - -15.1  -5.33405   CCGACCAAACAAAAA          GGCCTTCGATC CGA GATCAAAGGCC          TTTCCATTTGTACTG 100 113
APT56_RS20165 4549672 .. 4549696 - -21.5  -4.54727   CCGCGCAAACGAAAA          CGGCCTGGCGA AAA TCGCCAGGCCG          TTGCCAGAATGCTTG 100 274
APT56_RS20155 4548506 .. 4548539 -  -3.8  -3.40403   CGGCCTGCACGACAA    GCTGCTG-G-GCCAGG TCGA CCTGGCGCTCATCGGC     CAGCATTATCTCAAC  49 351
APT56_RS20145 4547126 .. 4547154 -  -6.7  -3.28924   CAGTTCCGGCGAGAA       GGT-CGCCTGGC TGGGCG GCCAGGCCTACC        AACTGCTCAAGAACG  52 85
APT56_RS20125 4545299 .. 4545329 - -19.7  -3.05384   CGGCTTCTGACGCAA       GCGCCGTCCGCGC CGTCC GCGCCGACGGCGC       CCGCGCGGCCAGCCC  93 59
APT56_RS20115 4543675 .. 4543732 - -13.1  -3.53012   GGCTGGCCGCGTAAA GCCGGCCCGCGCCACACGGCGACCGGGC GCG GCCGCGCCTCAG-GCGGCCGGGGCCGGC AGCGCCGCGCGCACG  78 7
APT56_RS20110 4542616 .. 4542634 -  -6.6  -4.68512   GGACAAGAAAAAGAA             TCCAAGCG TGC CGCCTGGG             CCGTGTCATCCTGGG  82 211
APT56_RS20105 NONE
APT56_RS20100 NONE
APT56_RS20095 NONE
APT56_RS20090 4538858 .. 4538906 -  -7.2  -3.72576   GCGTCGGCCACGAAA GCGTGCAGCCGCGCCTGCGCGGCG CGT CGG-GCACCGCCGCGGCCGC-CGT CGAACCGGCTGTCGC  64 200
APT56_RS20055 NONE
APT56_RS20050 4529067 .. 4529077 -  -3.2  -3.65046   GGTCGACCGCAAGAA                 GGAC ATG ATCC                 TGGTGTCCGGCTTCA  51 397
APT56_RS19995 4512626 .. 4512636 -  -5.4  -3.08314   CGGAATTGGCAAAAT                 CAAG ACG CTTG                 CTGGCGATATAATCC  47 380
APT56_RS19990 4511602 .. 4511631 -  -2.7  -3.21747   TGATTGGAGGAGGAA       TGCTGCGGC-ACGG CGA CCGTCGATGCTGCA       GTGTGTATGACCTAG  44 71
APT56_RS19985 4510472 .. 4510507 -    -6  -3.56643   GCGAGATCCGGGAAA    GATTGGGCGCCGCGGCG CGT CGCCATG-CGCTCGATC    ACCTGCACGTGGACG  57 218
APT56_RS19915 4495859 .. 4495886 -   -14  -3.53012   CGCGGCGCCCCCAAA        GGCGTGGGCCGG ATCC CCGCCCCGCGCC         CAGCGGCGCGGGGCG  81 56
APT56_RS19910 NONE
APT56_RS19905 NONE
APT56_RS19900 NONE
APT56_RS19895 4489179 .. 4489225 -  -7.9  -2.52464   GGCGGTGGGAAGGTA GGCCGGGCCGCTCATCGGGACAG CCC CTG-CGGGATGC-CGGCCGGGCC GGCGAACGGATGAGA  50 177
APT56_RS19890 NONE
APT56_RS19885 4486944 .. 4486977 - -14.5  -3.28712   CGTCGCCCTGTACAA     CCAGCTGACCGCCTG GGAC CACGCGGCCGGCTGG      CTGCTGCACCGCGAA  79 381
APT56_RS19865 4481571 .. 4481629 - -11.7  -3.54459   CCAACGGCCGTCAAA GCCCGTG-CCACGCGGCCAGCCTTGAC CGCCCGC GTCA-GGCCGGCTGCGCGGCCACCGCC GGCGCGGCCGGCGTC  72 1
APT56_RS19855 4478266 .. 4478305 - -14.3  -2.78596   TATCGGCCGATGATA GCCCACCG-GCGC-CGCCGC GCG GCGGCGTGCGCGCGG-GGTC CGAGCCCCGGCGAAC  71 46
APT56_RS19850 4477112 .. 4477161 -  -8.6  -4.13767   CTCCTGAGGGGAAAA CGCAGGCAGTTTGCCACAGCCGCG CCGG CGCCGC-GCGGCAAAGTGCGT-CG CCGTCGTCACACTGC  72 55
APT56_RS19845 4476322 .. 4476335 -  -3.7  -3.99878   ACAGAGAATAGCAAA               GGTGC ATCC GCCCC                AGTACCCTGGCATCC  60 110
APT56_RS19840 NONE
APT56_RS19835 NONE
APT56_RS19830 NONE
APT56_RS19825 4469553 .. 4469570 -  -8.3  -3.14344   CACCGCCCTGATCAA             CCGGCTG GAAG CGGCCGG              ATATGTGCAACGGGG  56 319
APT56_RS19805 4464121 .. 4464139 -  -5.2  -2.59431   TCGCTTGATAATCGA             GCCATGCC ATC GAGATGGC             GCTGGCCCCCTAAGC  43 103
APT56_RS19800 4463823 .. 4463851 -  -6.6   -3.6279   AAATGTGGTCAATAA       GGGCT-CCGCGCC CGGC GGAGCGGCAGGCC        CGACCGTTCGACCCG  59 86
APT56_RS19795 NONE
APT56_RS19790 NONE
APT56_RS19785 NONE
APT56_RS19780 4461284 .. 4461304 -  -6.7  -3.12351   CTGGTTGACAGGTAA            GGTCCAGCC GCG GGCGGCACC            AGGCCACGCGCAGCC  51 46
APT56_RS19775 NONE
APT56_RS19770 NONE
APT56_RS19765 NONE
APT56_RS19760 4456239 .. 4456250 -  -5.8  -3.53012   CGCGGCGCCCTCAAA                TGGC CTTG GCCA                 TGCGGTACAGGATGT  55 9
APT56_RS19755 NONE
APT56_RS19750 NONE
APT56_RS19745 NONE
APT56_RS19740 NONE
APT56_RS19735 4450260 .. 4450273 -  -8.1  -3.32844   GGGCCCACGGCAGAA               GGCCT CATG AGGCC                TCCACGATGCCATCG  58 16
APT56_RS19730 4449380 .. 4449397 - -14.1   -4.4078   CGCGCCCAACGAAAA             GCGGGCC CGTG GGCCCGC              TAGCTGGCGTGCGAA 100 45
APT56_RS19725 4448704 .. 4448728 - -13.6   -4.7497   GGCAGGTACGAAAAA         GCGCCAG-CCC TTCG GGGTCTGGCGC          TTTTTTTTGCCTGGC 100 64
APT56_RS19705 4444459 .. 4444475 - -15.1  -4.11664   TCCAGAACAAGGAAA              CGCCCGC GAT GCGGGCG              GCAGCCATTATGCAT  95 110
APT56_RS19700 4443359 .. 4443386 - -21.4  -3.84451   GGCCGCAAAGGCAAA        GCCCCTGGAACC GCGA GGTTCCAGGGGC         TTTTTTTCAGGGCCG 100 81
APT56_RS19685 4438107 .. 4438117 -  -2.4  -4.67234   AGGGAATCGCAAAAA                 TCCC GAT GGGT                 CACGCTCGGTAACGG  70 279
APT56_RS19680 4435820 .. 4435864 - -15.8  -2.94099   GGCGCGCATCACATA CCCGATCACGATGCCCGCCCG GCAG CGGGCGGG-ATGGCGATCAGA AGTCCATGCTGGCGC  81 21
APT56_RS19645 4428110 .. 4428124 -  -5.7  -2.82516   GCCGCCATCAGTAGA               GCTTC TGCGT GAAGC               CGTCCACCACGATGG  47 3
APT56_RS19640 NONE
APT56_RS19635 4425911 .. 4425926 - -10.4  -3.14051   GCAGTGGTACGAACA              GGTGGG ACTG CCCACC               ACGCTGGCAGCGCTG  60 311
APT56_RS19620 NONE
APT56_RS19615 NONE
APT56_RS19610 NONE
APT56_RS19605 4419779 .. 4419803 - -15.7  -3.53012   CGGCCGCCCCGCAAA          CCGCGCCGG CCCGAAC CCGGCGCGG          ACTTCTCCTTCGAGG  90 51
APT56_RS19565 4413066 .. 4413099 -  -4.4  -3.16873   TGAAAGGGAACAAAG     CG-GGGCGGCGGCTC AGTTG GACCAGCCGCCGTCG     ATAACCTGGATGGTA  45 4
APT56_RS19560 4412180 .. 4412193 -  -3.8  -2.78679   GCGTTGGAGTGAAAC               CCGA TTTTAT TCGG                CCCGGCTCCAGGCCC  43 18
APT56_RS19555 4410961 .. 4410989 -  -7.3  -3.65046   GGCGCATGGCAAGAA        CGAAGGCAAGGTG GCG CACCTGGCGATCG        ACCGCGCCAAGGCCT  60 345
APT56_RS19535 4406104 .. 4406150 -  -4.9  -3.53012   CGGCGGGCGGCGAAA CCGC-CGCCCCGCG-CCGCGCCG TCT CGCCGCTGTCGCAGCGCGAACTG GAAGTGCTGCGGCAG  52 295
APT56_RS19525 4403868 .. 4403895 - -18.4  -3.57144   GTCCGGATGCTGAAA        CGCCGCGTGTCC CGAC GGACGCGCGGCG         TTCATGCGTGACCGC  93 72
APT56_RS19515 NONE
APT56_RS19510 NONE
APT56_RS19505 4400180 .. 4400194 -  -5.7  -3.27676   AGTGATTCAAATAGA               CGATG GTGTT CATCG               GATTCAATGGAAAAG  51 29
APT56_RS19500 NONE
APT56_RS19495 4398937 .. 4398951 - -12.8  -3.34344   GGAGGCCGGAAGGAA               GCCGCC TCA GGCGGC               GGGCGTGGAATCTTT  77 17
APT56_RS19490 4396695 .. 4396731 - -12.9  -3.72576   GCGGCGGCGATGAAA   GCC-GCCGCGCGGTGC AACAGG GCCCCGCGCGCCAGGC    TCAGAACCGCGTCCG  84 26
APT56_RS19485 4394172 .. 4394197 - -16.1  -5.76949   TACTGGTAAAAAAAA         GGGGCGTCCCG AGGC CGGGACGCCCG          CCTGCCTGCGAGCGC 100 297
APT56_RS19460 4386766 .. 4386779 -  -4.5  -4.09685   CTGTAGGCGGCAAAA               CG-GCG CGG CGCGCG               TCCTCTACGCTGGCT  62 154
APT56_RS19420 NONE
APT56_RS19415 4375851 .. 4375886 -  -8.9  -3.33696   TGGGTCTTCAAGCAA    GGCGGCGCCGATGCC CATCCT GTCATCTACACCGCC     ACGCGGCAATTCAGC  59 189
APT56_RS19405 NONE
        ligD 4371208 .. 4371226 -    -3  -4.11216   TGGCGACCTCGAAAA             TGGACGTC TAT GACGTACT             GATGCAGGCCACCGG  61 406
APT56_RS19375 NONE
APT56_RS19370 NONE
APT56_RS19365 NONE
APT56_RS19360 4362852 .. 4362862 -  -2.4  -3.32844   CGCGCCACCGGACAA                 CTGG TGG CCGG                 CATCGTCCATGCGAG  45 345
APT56_RS19330 4355757 .. 4355780 -  -6.6   -3.1855   TCTCTCAAGACGCAA          CCGGCAGCGCA TCG CGCGC-GCCTG          CCCTACGGCAGGTTC  54 28
APT56_RS19325 4354980 .. 4354992 -  -4.7  -2.72344   CGCCAGGCTGAATCA                CCCGC GCG GCGTG                TCGCGACCAGGCCGT  44 50
APT56_RS19290 4345596 .. 4345614 -  -4.5  -3.60098   ATCGTCGAGTCGAAA            CTGGCGGA CTAT CCCGCC-G             ATACGCTGTTCGTCA  54 203
APT56_RS19280 4344248 .. 4344267 -  -5.6  -2.70932   CGCCGCGCCGAATCA            GCGCGCCTG GAC CTGG-GCGC            CGCCCTTCGGCTCTC  46 3
APT56_RS19270 NONE
APT56_RS19265 4341184 .. 4341197 -  -2.3  -3.53811   GCGATGCGCGCGAAA               TGCTG CGCA CCGCA                TGGTATCTGGCGGCC  50 284
APT56_RS19235 4331820 .. 4331843 -  -3.8  -2.90403   CCAAGCCAGAACAAC          CGCGGTGTCGA ACC TCAAC-CCGCT          TGCACGTTGGCGGAA  43 239
APT56_RS19230 NONE
APT56_RS19225 NONE
APT56_RS19220 4329074 .. 4329089 -  -6.8  -4.08945   ATCATGGGCGGAAAA              GGTCGC GATA ACGACC               GATAAGCATGCCCGA  68 135
APT56_RS19215 NONE
APT56_RS19210 4327883 .. 4327897 -  -3.4   -4.5442   GCCTGAACCAGAAAA               TGGCGC CCG ACGCCG               CGCCCAAGCCGCCGC  72 255
APT56_RS19200 NONE
APT56_RS19195 NONE
APT56_RS19190 4325207 .. 4325239 -  -6.9   -3.2624   TAAATAATTCACGAA     CCCCG-GCGGGCCG CGGCGC CGGCCGGCTCAGGA      CAGCAGCACCACGCC  54 20
APT56_RS19185 4312365 .. 4312379 -  -2.1  -2.63715   AGCGAGCGGATATGA              CG-GTC GGGT GACGCG               CTCGTGACAGTTGCC  38 91
APT56_RS19180 NONE
APT56_RS19175 NONE
APT56_RS19170 4309938 .. 4309948 -  -2.4  -4.56597   GTTCGCCGGGAAAAA                 CGGC GAC GCGG                 ACCGGGCGATTCTGC  67 133
APT56_RS19165 4297067 .. 4297099 - -17.1  -4.08064   AAGCCGCGCGGAAAA     GCATCAGGGCCCGG TTTTCG CCGGGCCCTGA-GC      CGCTTTTCACGCGCC  95 102
APT56_RS19160 NONE
APT56_RS19155 NONE
APT56_RS19150 NONE
APT56_RS19145 NONE
APT56_RS19140 NONE
APT56_RS19135 NONE
APT56_RS19130 NONE
APT56_RS19125 NONE
APT56_RS19120 NONE
APT56_RS19115 4286936 .. 4286948 -  -3.3  -2.87132   GCTCCTGCGGACAGA                GACGA AAT CCGCC                TTATTCTATGCCCAC  41 92
        pdxK 4286025 .. 4286049 -   -10  -2.83164   GTATTGAGCAGGACA         CGGCGGGCGCGG CGG CC-CGCCCGC-G         TCAACCTTCCACCGC  60 26
APT56_RS19075 NONE
APT56_RS19070 4278390 .. 4278409 -   -10  -3.01712   CGGCCCGCTCGAAGA            CCTGCCCGC GCT GCGGG-AGG            AACAACTGGCGGCCC  59 352
APT56_RS19045 4274285 .. 4274300 -  -4.6  -2.74248   GAAGATGTGCGAAAT              CGGCCT GATC ACGCCG               CCGGTCGGGCTGAAT  43 217
APT56_RS19015 NONE
APT56_RS19010 NONE
APT56_RS19005 4253781 .. 4253809 - -17.3  -5.08824   GTGTTATGGAAAAAA        GCGCCCCGGCCCC GCC GGCGCCGGGGCGG        ACCGGTCATGCCGCG 100 31
APT56_RS19000 NONE
APT56_RS18995 NONE
APT56_RS18990 4251059 .. 4251074 -  -8.2  -3.01712   GCGGCGGCCGCAAGA              CCGCGC TATG GCGCGA               CGAACGCCGTCACCT  56 15
APT56_RS18980 4248992 .. 4249006 -    -7  -2.51966   CTAAAGGCCAGCAAG               CGGCTG AAC CGGCCG               GCGATCTCCACCGGG  48 332
APT56_RS18970 NONE
APT56_RS18965 4246862 .. 4246910 -  -4.5  -5.40474   AGGTTCCGAAAAAAA GCGTTGC-CGGCCGGCG-CGCGACA GGG CGCCGGGTCGCCGGACGTGC--CGC GATATTAGCGCCGAC  93 148
APT56_RS18960 4246246 .. 4246271 - -16.9  -3.29144   CGATCCCGCCCACAA         GCCCGGCTGACG GCG CGTC-GCCGGGC         GATGCCCGGCGCCCG  89 84
APT56_RS18945 4243830 .. 4243840 -  -2.4  -2.87051   GCTGCAGGAGGAAAT                 GGCG GCG CGGC                 TGGACGAACAGAACA  40 292
APT56_RS18935 NONE
APT56_RS18930 4241339 .. 4241349 -  -2.4  -3.06696   GGCGCCTGCAATATA                 GCCG ACT CGCC                 CCGCGCCTCACACCT  42 33
APT56_RS18925 4240319 .. 4240356 -   -17  -3.05935   AGATTCCCGAGTGAA  GC-GGCCG-GCGCGAGGG TCAG CCCGCGCGCTCGGCCAGC   GCTTCCAGCAGTTCG  85 4
APT56_RS18910 NONE
APT56_RS18905 NONE
APT56_RS18900 4234669 .. 4234679 -  -8.2  -3.54424   TGGGACTGTCGTAAA                 GCCG TTG CGGC                 AGACCACAGGCCGGG  62 65
        ampC 4231730 .. 4231754 -  -2.7  -3.34398   GCGCTGCGGCAAAGA          CCGATGCCG GCGTTCA CGGCGCCAG          CGCCTTCAATACCCG  45 14
APT56_RS18885 4231038 .. 4231052 -  -4.2  -3.71873   GGAGTCATATGGAAA               TCGCCT CTC AGTCGA               TACGGTTATGAGCAG  56 205
APT56_RS18880 4230199 .. 4230211 -  -2.6  -3.21276   TGCCGGCTCAGAAGA                CCGG AATCA CCGA                GCCTTCGTACTTGCT  44 5
APT56_RS18875 NONE
APT56_RS18870 NONE
APT56_RS18865 4226893 .. 4226907 - -11.4  -3.14132   TTCCGCGCGCATCAA               CTGGCG GTG CGCCAG               TTGACGGAGGAACGG  64 222
APT56_RS18850 4223749 .. 4223778 - -10.5  -3.59627   AGGAAACCCCGGAAA       GCGTGGCCGCGCG CGAA CGCGCGGCCGAGA        TGCGGCGCCTGGCGC  67 143
APT56_RS18825 4218698 .. 4218731 -  -3.6  -3.28712   CGTTTCTGTTTAGAA     CGACACGGGCGGCG CGGTTC CGGCGCGAGCGCCG      TCTTAAGCGTGGCTT  45 67
APT56_RS18820 4216745 .. 4216788 -  -8.7  -3.16564   TCGGGACCTGAGCAA CATCCGCGCACGACGGGCGC CGCCC GCGCCCGTGCCG-GCGGCCG GCCACCGGGGCCGGG  57 69
APT56_RS18810 4215177 .. 4215214 - -12.1  -3.01712   CGTCTCGGCCGAAGA  GCGCC--GCGCGCTCGAC GACTG GTCG-GCGCGCCTGGCGC  GCGGCGAGATCACGG  66 68
APT56_RS18785 4208798 .. 4208820 -    -4  -3.42503   CGGCAAGACGCAGAA           CGACCTGATC GGC GGCCAGCTCG           ACGTGGGGTTGGACG  49 386
APT56_RS18760 4203955 .. 4203998 -  -2.3  -4.62471   GGTAATCCTGAAAAA TCGAAGTCAGC-CCGGATCG TACCG CGAGCGGGCGCCGAAATCGA ACCGGAAAGCACGCG  70 65
APT56_RS18755 NONE
APT56_RS18750 4201614 .. 4201645 -  -6.4  -2.87132   CGCTCCGTGGACACA      CCGC-TGGCGTCGCG GTA CGCGGCGCAACGCGC      GGCAATCGCGGCGGG  49 83
APT56_RS18745 NONE
APT56_RS18740 4200494 .. 4200512 -  -6.6  -2.91264   GCGGCCATCCACACA             GGCCGGCA ATA TGCCGACA             ACGCCAATACGCAGA  49 262
APT56_RS18735 NONE
APT56_RS18730 4199291 .. 4199313 - -10.4  -3.53012   TGGGCCGTTCGGAAA           CCGATGCCGC GGG GCGGCCGCGG           CCGATCATCCATATG  65 61
APT56_RS18685 4188277 .. 4188304 - -12.8  -3.09015   TCGATACCGACGGAA        GGCGTCGCC-ATG CGG CATCGGCAACGCC        GGCAGTTATGATGCG  72 504
APT56_RS18675 4187417 .. 4187438 -  -2.1  -4.02581   GTTGATAAAACAGAA           CTTGCCATC AATG GCCGGCCAG            GATGCCTGGCGCCTT  57 166
APT56_RS18670 NONE
APT56_RS18665 4185655 .. 4185672 - -12.7  -5.06414   CCGCGGTAAGAAAAA             GCGAGGC GGCA GCCTCGC              TTGATTGCGCGCCGC 100 144
APT56_RS18605 NONE
APT56_RS18600 4174134 .. 4174146 -  -7.7  -2.60496   CCGGCGCGCAAAGAT                CGCTA GCG TAGCG                CATGCGCCACGCGCC  50 63
APT56_RS18595 NONE
APT56_RS18590 4172899 .. 4172923 -  -7.8  -2.91144   CTACGTGGCAAAGGA         TGGGCCGGTGC GCTC GCGCCGGCC-A          GGAACAGCTTAACAG  52 52
APT56_RS18585 4172257 .. 4172284 -  -5.4  -3.90112   TCTCGCGGAAGGAAA        TGGCG-GCCCGGC CCA ACCGGGCGCGCGG        CGTTGGAAAGCAAGC  60 41
APT56_RS18580 NONE
APT56_RS18575 NONE
APT56_RS18570 4170934 .. 4170968 - -14.2  -3.05384   GTTGGCCTGACCGAA     CCCGGCCTGACGCAGC CCT GCCGGGTCAAGCCCGG     CGGGCGCGGCGCCTA  76 38
APT56_RS18560 4168326 .. 4168347 -  -7.1  -3.61517   AGTTCGGGGTAAGAA           GCGGTCACG GTCG CGGGCCCGC            CCCGGGCCCGATGCT  59 78
APT56_RS18555 4167373 .. 4167418 - -11.8  -3.64703   CTCTTGCCATGGAAA CCGCGCGGGCGCGAACGCGCAT CGGC ATGCGCG--CGATCCCGCGCGT CGGGTGTGGCCAGAA  77 62
APT56_RS18550 4165002 .. 4165015 -  -4.5  -2.90956   AAACCATTCTAGAGA               GCGACG TGG CG-CGC               CACTGGCGATTACGG  43 139
APT56_RS18545 4162774 .. 4162805 -   -10  -5.00616   CTCTCCTTGAAAAAA      GGGATGGCCGGCGC GCCC GCGCCGTCCATCGA       TCGCACACCGCTCAG 100 37
APT56_RS18540 4162289 .. 4162316 -  -9.8   -3.3353   CCTGGGAGAAATACA        GCGCGCC-GATCA TGA CGAACAGGCGCGC        ATTCGCGGTTTGCTT  64 55
APT56_RS18535 4161090 .. 4161108 -  -3.1  -4.54727   GGCTTGAAAGCAAAA            CGGCGCAC AAGT GTA-GCCG             CAACCGCCCGAAACG  69 46
APT56_RS18530 4159748 .. 4159804 - -10.1   -2.9155   GCCGGCAATATGACA GGGCGCGGCGCGCACGCCCAAGCGCCGAG GAC CTCGGGGC--G-GCAGGCTCGCCGC-CCC GTGTATCAATCGAAC  62 31
APT56_RS18525 NONE
APT56_RS18520 4158170 .. 4158180 -  -2.4  -3.60048   GCTCCTTGAAAAAAG                 CGGC GTG GCTG                 AATGCCTGACGCCAT  50 331
APT56_RS18515 4157677 .. 4157710 - -11.8   -3.2614   CATGCGCGACACCAA     GCATCAGTCG-GCCA TGCAC CGGCACGACTGACGC     CGCGCGCGGGGAACG  71 123
APT56_RS18490 4150827 .. 4150852 - -18.3  -5.75342   GCTGCCCAAAAAAAA         GCCCCGCAAGC GCTT GCCTGCGGGGC          TTTGGGGTGCGCGCC 100 64
APT56_RS18465 NONE
APT56_RS18460 NONE
APT56_RS18455 4143640 .. 4143677 -  -4.7  -3.30441   CATCATCCGCCACAA   GGAACATGCGCTGAGCCC GGC GGCCGAAGCGC-TGATCC   GCGCCATCCGCGACT  49 177
APT56_RS18445 NONE
APT56_RS18440 4140149 .. 4140171 -  -9.9  -3.53012   CCGGTTGGCCGGAAA          GGCCGTACTC CCCG GAG-ACGGCC           GGCTCCCCGCCTTAC  65 37
APT56_RS18435 NONE
APT56_RS18430 4139038 .. 4139081 - -14.4  -3.05384   GGGCCGGCGACTGAA GCGTCGCCAAGGCGCCACGC AACC GCATGGCGGCCCCGCGCCGC CGCAACGCGGGCGCC  76 48
APT56_RS18410 4134542 .. 4134559 - -14.1  -4.08216   TTACTGGGTCGAAAA             CGGGCGC TTGG GCGCCCG              GTTTTTCAAGTAGAC  93 197
APT56_RS18405 4133619 .. 4133631 -  -4.7  -5.06414   CCGCGGCAAGAAAAA                CGGCG CCC CGCTG                AACTGCCCCCCGGGA  85 180
APT56_RS18380 NONE
APT56_RS18375 4127103 .. 4127124 -  -2.3  -3.86372   TCAACGGAAATAGAA           CGGCT-TCTT GCT AACATAGCCG           CCATGAGTCCGAGCT  55 476
APT56_RS18360 4124549 .. 4124562 -  -2.3  -4.30576   GGGCGATCAGCAAAA               GACTC ACTT GAGGC                TCCCGTCAGCGCAGC  63 31
APT56_RS18355 4123604 .. 4123623 -  -9.2  -3.06261   TCCTAATGGTGAAGA            CCCGAGGG CTGC CCCTCCGG             CCTTTCCGACACGGG  60 184
APT56_RS18350 4123235 .. 4123260 - -12.6  -5.07011   CACACAAACGAAAAA         GCCTCTCGGC GCCCAT ACCGAGAGGC          TTTCGACTTCCAGGC 100 105
APT56_RS18330 4118757 .. 4118767 -  -2.4  -2.83403   GTCGGGCCACGAAAT                 CTCC TGG GGCG                 TATCGACAGCGCTCA  40 70
APT56_RS18325 NONE
APT56_RS18320 4116764 .. 4116783 - -16.4  -3.33696   GGGTCGGTGAATCAA            CGCGCGGG CAGG CCCGCGCG             GCGGGGAAAACGTCA  90 59
APT56_RS18315 4115665 .. 4115691 - -17.3  -3.06796   TCCCATCGTATTGAA        CCCCCG-GCGCC GCCC GGCGCGCGGGGG         AGTTGATACAGAACG  88 41
APT56_RS18310 4114828 .. 4114859 - -17.2  -3.21695   GGAGCAGTAAGGCAA      GGCGCGGCCGTGGC GAAC GCGACGGCCGCGCG       ATCAGGCAGGATCAG  91 37
APT56_RS18300 4112406 .. 4112423 - -11.3  -3.89756   ACGGCAAATGAAGAA             GGATGCC CACG GGCATCC              TTTTTTGTTGCCCGC  79 165
APT56_RS18260 4103430 .. 4103446 -  -5.8  -3.05384   CCGGCGGCCACGCAA             CGGCGCC CTCC GGC-CCG              GGGCCGCGCCAGGTC  48 418
APT56_RS18240 4100053 .. 4100069 -  -5.7  -2.87132   CGCGCGTGTCAGAGA              TCGCGCG TCT CGCGCAC              TTGCCTGACTTCGAC  47 2
APT56_RS18235 4096633 .. 4096667 - -15.1  -2.78715   AACTCTGCGAGGATA    CCGCGTTAACCCCGCG GCGG CGCGGGGTTAACG-GT     CATGTGTTTATGCCC  77 55
APT56_RS18230 4095930 .. 4095952 - -20.6  -5.07652   CCGCGCAAAACAAAA           GGCCCCTCGC GAC GCGAGGGGCC           TCTGGCTTGCGTTGC 100 61
APT56_RS18225 4093983 .. 4093996 -  -6.7  -2.57132   CGCTTGCTTCAGAAT               GACGA CCAG TCGTC                CTCGTCGGCCGCGTG  47 5
APT56_RS18220 NONE
APT56_RS18215 4091066 .. 4091083 - -12.7   -3.9712   TGACGGCATGAGAAA             GGGAGCC CGCG GGCTCCC              TTTTGCGTGGCCGTC  89 77
APT56_RS18200 4089597 .. 4089616 - -12.1   -3.4678   ACGCTGACAGTAGAA            CGCCGCC TGTCGC GGCGGCG             CTTTTCTTATGAGTT  75 40
APT56_RS18195 4084159 .. 4084189 - -21.9  -4.03167   GAACACGAATAACAA       CGCGGCCAGCGCG AGAAG CACGCTGGCCGCG       AAGAGTCCGCGCCGC 100 90
APT56_RS18190 4081979 .. 4082004 -  -2.5  -2.90496   GCTCTTGGGAAATCA         CGCTTC-CTCCG TAA CGCATCGAAGCG         GGCAAATACACGATT  40 56
        clpA NONE
APT56_RS18180 NONE
APT56_RS18175 NONE
APT56_RS18170 4075869 .. 4075888 -  -7.2  -3.14132   CCGGGTTTGTATTAA            GGTTAACC CTAG AGTTAACC             GATTGAGATCGCGGC  51 68
        putA 4071907 .. 4071924 - -11.3  -3.51633   AGATATTGGAGATAA             CCCTTGG TTTC CCAAGGG              TTACCCCTCGGTCAC  72 43
APT56_RS18160 4070564 .. 4070597 - -14.5  -2.60075   GCGGGGTCAATCAAG     TTGGCCAGG-CGCGGC GGC GCCGCGTCCTGGCCGG     GTCAGGCGGCCTTAG  74 37
APT56_RS18155 NONE
APT56_RS18150 NONE
APT56_RS18145 NONE
APT56_RS18140 4066858 .. 4066874 - -15.1  -5.14965   ACGCGCATGAAAAAA              GCCCGGC ATG GCCGGGC              TTTTTCATTGCGGCA 100 52
APT56_RS18125 4063706 .. 4063730 - -10.7  -3.03124   CGCGATGGGGGAACA          GCACGAGTCCA TCT TAGACCCGCGC          ATGCTGCGTTGCAAT  62 146
APT56_RS18120 4063407 .. 4063424 - -12.7  -4.90266   CGCATCAATGAAAAA             CGCCAGC AATC GCTGGCG              TTTTTTTCTGGCGCA 100 51
APT56_RS18115 4062290 .. 4062324 -  -6.5  -2.83641   GAACGCACGATGACA     CTCTTCAATGGTG ATTCGGACG CACCACTGTAGAG     ACCGCCATGCATGCG  49 120
APT56_RS18110 NONE
APT56_RS18105 4059859 .. 4059883 -    -5  -3.53811   CGTAGGCGCGCCAAA         GCGCGCCGACCA GCA TGA-CGGCG-GC         GGCCACGGCGCACAG  53 99
APT56_RS18100 NONE
APT56_RS18095 4057265 .. 4057288 -  -5.2  -3.25942   AGGCTTCCAGATCAA          CAGCGGCTGGT CCG ATC-GCCGCCG          CGCGCTGGCCACGCG  49 269
APT56_RS18080 NONE
APT56_RS18075 4053236 .. 4053251 - -10.4  -5.53991   TATGGACGAAAAAAA              GCAGGC CGAA GCCTGC               TTTTCCCTGTCCCGC 100 90
APT56_RS18070 4052211 .. 4052221 -  -2.4  -2.62396   TATGTTCGGATATGA                 GCTG CAT CGGC                 GCCCCCTATTGCCCG  38 31
APT56_RS18065 NONE
APT56_RS18060 NONE
APT56_RS18055 4050019 .. 4050038 - -10.6   -2.8655   CGGATGCACAGCATA            GCGCCGGC ATCC GCCCGCGC             GGCCAATCCCGACGC  60 116
APT56_RS18050 4048824 .. 4048840 - -15.1  -4.72272   TCCGCCCATGAAAAA              CGCCGCG TCA CGCGGCG              TTTTTTGCTTGGACG 100 52
APT56_RS18030 4045664 .. 4045683 - -12.1  -5.52384   GCTGGACGAAAAAAA            GCCCGCC TAAGCG GGCGGGC             CTGCCAGACAGCGCG 100 52
APT56_RS18025 4044685 .. 4044695 -  -2.4  -3.60792   CGTGGAATCGGGAAA                 GTCG GAG CGCC                 GCGCGCAGGCGGCCG  50 79
APT56_RS18020 NONE
APT56_RS18015 NONE
APT56_RS18010 NONE
APT56_RS18005 4041276 .. 4041295 - -13.6  -6.02914   TCGAGACAAAAAAAA            CGCCAGAC GCGA GTCTGGCG             TTTTTGTTTGCGGCG 100 69
APT56_RS17980 4034659 .. 4034675 -    -5  -3.80733   GGGACGCGAGAAGAA              GGAGCG GCCGT CGCGCC              CTTCGGCGGAGCGTC  58 172
APT56_RS17975 4032077 .. 4032094 -  -5.5  -3.06815   ATCGGCGCCAAGACA             GCCGG CTCGGGGT CCGGC              CTCATGAACTGGCCT  49 190
APT56_RS17965 NONE
APT56_RS17960 NONE
APT56_RS17955 4027342 .. 4027371 - -13.5  -5.00616   GCGCCGCCGAAAAAA       GAATGGCCGCGGC TGGA GCCGCGGCCATGG        AACTGCCGTTGCGCA 100 82
APT56_RS17900 4012255 .. 4012284 - -18.7  -4.67038   CTCCCAAAATGAAAA       GACCCCGAGACAC ACGG ATGTCTCGGGGTC        TTGGGATACTGCCGG 100 71
APT56_RS17875 NONE
APT56_RS17870 NONE
APT56_RS17865 NONE
APT56_RS17860 NONE
APT56_RS17855 4002535 .. 4002549 -  -4.2  -4.18018   CTCCGCGATTGAAAA               CGCG AAGGTAG CGCG               GGGCCGGCGTTACGA  62 130
APT56_RS17850 4001692 .. 4001702 -  -8.2  -3.09492   GCTCGAACCCGAAGA                 CCGG TAT CCGG                 TGCGCTACCGCACGC  55 124
APT56_RS17835 3998426 .. 3998443 -  -6.9  -3.80733   CGGATCGTATAACAA             CTTCGCG GATC CGCGATG              ACAGCCGTCAGGGTT  62 33
APT56_RS17830 3998062 .. 3998078 -  -2.9  -4.58663   AGCACCGTGGAAAAA              TTACCAG GGG CCGGTCA              GAATTCCGGCAGGTC  69 23
APT56_RS17825 3997617 .. 3997636 -  -3.4  -3.73775   TCGACGGCGACGAAA            TCCGCGCC TTTG GGCGCAAG             TTCGCCCTGCGCCAG  54 71
APT56_RS17805 NONE
APT56_RS17800 3994167 .. 3994209 - -11.3  -2.71712   TGGCGCTGGTGAAAT CGCGCCAGGAACTGCCGGCG CGCA CGGCGGGA-TTCCTGGCACA TCTGCGCGCGGCCTT  59 102
APT56_RS17790 NONE
APT56_RS17785 3991579 .. 3991599 -  -5.4  -2.55351   GTCCCCGAGACCAAT           CGCC-G-CGG GAG CCGCCTGGCG           CGCCCTGCCCGGCCG  43 53
APT56_RS17780 3991053 .. 3991067 - -12.8  -3.69734   AACAAGTCAGCGAAA               CGGCGG CCA CCGCCG               GCGACACGCGCTGGC  78 188
APT56_RS17770 3990340 .. 3990354 -    -5  -3.27475   GGCGCGACTATAACA               GCCTTA TGC TAAGAC               TTCCTGACAGCGGGG  49 19
APT56_RS17765 3989812 .. 3989825 -  -2.3  -4.46215   CATAGGCAAAAAGAA               CGCCT GCAT AGGTG                TAAACACCCACGCAT  67 137
APT56_RS17760 3989326 .. 3989339 -  -9.5   -5.1287   CCCAGACGCAAAAAA               GCCCC CGAA GGGGC                TTTTCCGAAAACGCA 100 46
APT56_RS17755 3988330 .. 3988341 -  -5.8   -4.0098   CTCGAACCTAAAGAA                GCGA TTGC TCGC                 GGGGCGCCAGATCAT  64 268
APT56_RS17750 3988031 .. 3988052 - -17.3  -4.54727   TGCGCCAAATGAAAA           GCCCCGCAC AGCC GTGCGGGGC            TTTTGTCTTTGTGGC 100 73
APT56_RS17740 3986366 .. 3986405 - -29.4   -3.6502   GACCCCTGACGCAAA  GGGGCGCGAGCACCCGGA TAAG CCCGGATGCTCGCGCCCC   GTTTTCGACCCCGAA 100 68
APT56_RS17735 NONE
APT56_RS17730 3984242 .. 3984269 - -13.4  -3.96483   ATCTCAGGTAAAGAA        GCGCCGGACC GGGTGAAG GGCCCGGCGC         TTACTCAAACATGGC  89 68
APT56_RS17725 3982884 .. 3982900 -    -8  -5.71712   CCGGAGACAAAAAAA              CCCGTT ACGGA AACGGG              TTTTCTTGAAATATC 100 43
APT56_RS17720 3980151 .. 3980174 - -16.8  -5.40072   GCCGCGCGAAAAAAA          GAAACCCCGC TTGC GCGGGGTTTC           TTTCATTGGGCATCC 100 67
APT56_RS17705 3975741 .. 3975752 -    -3  -3.87641   AATATTTCCTATAAA                TCAA ATAG TTGA                 ACGCTATATTTAAGG  56 164
APT56_RS17700 3975076 .. 3975091 - -11.8  -5.24129   CCCGGCTAGAAAAAA              CCGCGC TGTC GCGCGG               TTCTTTTCACTGCCA 100 84
APT56_RS17695 NONE
APT56_RS17690 NONE
APT56_RS17685 NONE
        iscA NONE
        hscB NONE
APT56_RS17670 NONE
APT56_RS17665 NONE
APT56_RS17660 3969400 .. 3969415 - -10.4  -4.74103   CCCCCAATGCAAAAA              CGCTCC CGAA GGAGCG               TTTCGCTGGAGGATC  95 39
APT56_RS17655 3968400 .. 3968415 - -11.8  -5.89921   ACGACAATAAAAAAA              GCGCCC TAAA GGGCGC               CCCGTCGGCATGCGA 100 46
APT56_RS17650 3966077 .. 3966087 -  -8.2  -4.56597   GCCTTCCGTGAAAAA                 CGCG CGC CGCG                 CTTCCAGGGCCGCTG  84 51
APT56_RS17640 3964235 .. 3964250 -  -3.2  -3.44284   CCTCCAGGAAGAACA              GGCC GTCCATCA GGCC               GCCTCGCGCAGCCGC  49 19
APT56_RS17635 NONE
APT56_RS17630 NONE
APT56_RS17625 NONE
APT56_RS17620 3960276 .. 3960290 -  -3.5  -2.78384   GGCGCGTTCATGACA              GCCAGC GCTT GC-GGC               GCTTGTAGTGCTTGA  40 3
APT56_RS17615 NONE
APT56_RS17610 NONE
APT56_RS17605 3956514 .. 3956534 -  -3.2  -3.18383   ATCGCCATCGAGGAA           GGCGC-CAC CGTC GTGCGCGTC            GGCCAGGCGATATTC  45 108
APT56_RS17590 3952521 .. 3952570 - -17.7  -3.06183   TTCATGGTGATGCAA CCCCGCCGCGGCCGCGGCGGCCAT GCC ACGGGCCCCGCGCCCGC-GCGGCG CACGCCGCTGTTCAT  82 289
APT56_RS17565 3947330 .. 3947355 - -20.5  -5.07652   CGCCGTAAAAGAAAA         CGGGCGCATCC TTGC GGATGCGCCCG          TTTCGCTCGCGGCCC 100 70
APT56_RS17560 3941405 .. 3941431 - -17.2  -3.08679   GTTGGTGATTGAACA         CGCCGGGTGAGG TTG CCCCGCCCGGCG         CCCGCCGCGCGGACT  88 98
APT56_RS17545 NONE
APT56_RS17540 3936655 .. 3936697 -  -6.2  -2.82623   TTTCCTGCACAATCA TCGCGCCGCCCGGCCCACGG ACCGG CCGCGGGC-GT-CAGCCCGA GACCAGCCGGCCGTT  47 17
APT56_RS17535 3935541 .. 3935572 -  -8.7  -3.05463   AGCGTGCGCATCGAA     CTGCCGCGCATGGCC GCCT GACC-CGCGCGGC-G      CTTCGCCAGTCGTCG  57 255
APT56_RS17520 NONE
APT56_RS17515 NONE
APT56_RS17510 3929094 .. 3929149 -  -9.5  -3.28684   AACGACGCACAGCAA CGCGGCCGTGGCCAGCAGCGCCAGGC GCCAG GCCTG-CGGCGAAGGCAACAGGCGCG ACACGGAGTCAGCCA  62 34
APT56_RS17505 NONE
APT56_RS17500 3927320 .. 3927359 -    -7  -3.53444   GCATGTGTGTGCAAA  GCATGCGCGGCGGGCCGGA TGC CCCAGCCCGGT-CGCATTC  CGTCCCCGGAAATTT  57 99
APT56_RS17495 3925028 .. 3925056 - -21.8  -2.90615   ACTGCGCTGAAACCA        CATCCGCGCGCC CTGTC GGCGCGCGGATG        CCTTTCCTTTTACAT 100 35
APT56_RS17485 NONE
APT56_RS17480 NONE
APT56_RS17475 3922515 .. 3922539 -  -5.5  -3.18582   CAGTGTACGCAGGAA          CGTGCCGCCCC GCC AGGACCGCGCG          GTGCCCGCCGCCCAA  51 185
APT56_RS17470 3921867 .. 3921896 - -14.9  -2.62192   CCGGAGGCAAGTAAC       CGGCGGCGCCGCG CTAG CGCAGCGCGGCCA        CCTCCATGACGGTTG  74 9
APT56_RS17460 3920020 .. 3920077 - -13.4  -2.72144   GGAGCGGCCGGAAAT GCCACGCGCGTCGCCCGC-GAACCGCGAC TGC GTCG-GCTCCAGCGCGCGGCGC-CGCGGC CGCCGCAATGCCGTC  68 60
APT56_RS17450 3914223 .. 3914272 - -25.8  -3.53444   TGACGGTGGCGTAAA CG-ATGCGCCGCGCCGCGG-GGCC GCCG GGCCGCCGCGGCGCGGCGCCTTCA GGTCCTGACCTGCCG 100 69
APT56_RS17420 NONE
APT56_RS17415 NONE
APT56_RS17410 3908389 .. 3908424 - -10.3  -3.26031   GGTAGGCCAAATATA    CCGGAGCCGGCGATTG AAGCG CGGCCGCCGGC-CCGG    CGCTTACGTGGTCTT  65 29
APT56_RS17405 3906835 .. 3906859 -  -5.6  -2.52896   TCATTCGTGAATGTA          TCCCGTAACG ATACA CGATGCGGGA          ATTGAAGGGTGAAAT  45 259
APT56_RS17400 NONE
APT56_RS17395 3906158 .. 3906168 -  -8.2  -4.30014   GCCATGAACCGAAAA                 GCCG CCC CGGC                 GGTCGGATGTCAATT  77 97
APT56_RS17375 NONE
        trpA 3901246 .. 3901260 -  -8.5  -3.09516   GCCCGGATGATTCAA               CGCGC TTGCC GCGCG               GCGCTGGCCAGCAAC  57 7
APT56_RS17365 3898225 .. 3898236 -  -3.6  -3.61715   TACGTGCTGGAAGAA                GGCA GCGC CGCC                 GAGAACACCTTGCGC  51 416
APT56_RS17350 NONE
APT56_RS17335 3890920 .. 3890962 -  -3.3   -4.2349   GCCCCAGACGGAAAA TGCCGGGCCTGGCCGCCCCCG CCT CCAACGC-GCCACGCCCGG-A TCGCCACGGGCGCGT  64 52
APT56_RS17320 3888162 .. 3888189 - -14.8  -2.78384   TTGTGCTCCATCAGA        CCGGCGCGCGCCG CCA CGGCG-GCGCCGC        GCATGGTCGGTATCT  75 40
APT56_RS17315 3887118 .. 3887142 -  -9.1  -3.50393   GCCTATTGTAGAGAA          GCCCCGCCCCC CTG GGTAGCGGCGC          CGGCCAGCGGCGTCC  65 92
APT56_RS17310 3886260 .. 3886277 -  -4.8  -3.28712   CCGCCCGCGCTAGAA             CCAGTC GTGCCA GACCGG              TTTCAGGTCCGGCGG  49 2
APT56_RS17305 3885482 .. 3885512 - -26.2  -3.72695   ATCCCGCCCACCAAA       GACGGGCGCCGGCC ACA AGCCGGCGCCCGTC       GCCTTTTGGAGAGTT 100 126
APT56_RS17285 3877944 .. 3877965 - -17.3   -4.7254   ACCGCCCATGAAAAA           GCCCCACCG ATAC CGGTGGGGC            TGTTGGCTGCCTCAC 100 76
APT56_RS17280 3876124 .. 3876151 - -18.4   -3.7282   CCACCTCATCAACAA        GGCGCGGCACGC ACAG GCGTCCCGCGCC         CCGAAGCACGGCGAT  93 53
APT56_RS17265 NONE
APT56_RS17260 3872347 .. 3872375 - -13.2  -3.39895   TCGGTGAGTAACGAA       GCAGCC-GGCGAGG TTC CCTCGCCCGGC-GC       ATGGCGGCCAAGCGT  77 40
APT56_RS17255 3870914 .. 3870932 -  -5.9  -3.70751   GAAGAAGTGGAAGAA             CGTGGCG GCCGA CGCCAAG             ATCCAGCTGGATCAG  60 117
APT56_RS17240 3867937 .. 3867954 -  -4.7  -4.56597   GCGGCGCCGGAAAAA             CAGTGCC GGCT GGCGCCG              CCCTTCGCCCTAGCG  74 35
APT56_RS17235 3866321 .. 3866337 - -15.1  -5.15634   GACGCCATGAAAAAA              GCCCGGC CAG GCCGGGC              TTTCTTTCCTGCGCC 100 49
APT56_RS17220 3864383 .. 3864407 -  -9.2  -2.96899   GGGGAAGGAAGCACA         GGCCGCCCGCC GAAC GGCGGG-GGTC          TCAATGACGGTATCT  59 161
APT56_RS17215 NONE
APT56_RS17210 3861619 .. 3861638 -  -7.8  -3.44051   CCGCGACTACCAGAA            CCAGCACG CCTA CACGCTGG             AATTCGCGCGCGCCC  58 382
APT56_RS17190 NONE
APT56_RS17185 3840480 .. 3840491 -  -7.2  -3.28712   GGCGCTGCGCGACAA                CGGC GGCG GCCG                 GCTGATCACTACCGA  55 383
APT56_RS17175 3839228 .. 3839270 -  -9.1  -3.02511   GGTATTCGCGCAACA TCCGGCGCGG-CGTGCCGGGC GTC GCGCAA-ACGTCGGCGCCGGA ACAGTAACGGCGTCC  59 93
APT56_RS17145 3832154 .. 3832188 -  -8.5  -2.78384   CTGGCGCTGACGATA    GGCGGCGCGG-TCATGC TGC GCAGGTTCCGCGCC-CC    GGCGAACCGCGGCCC  53 67
APT56_RS17135 3830554 .. 3830585 -  -9.4  -3.40403   CGCGGTTGACGACAA      CGACGTGGTGCGCCT GGA AGGCGG-CCACGCCA      ACGAAAACGGCTCGG  61 312
APT56_RS17120 3828675 .. 3828699 -  -8.4  -3.14132   CTGCTGCCGCAGTAA          GCGCGGGCGG GCCGG CCGACCGCGT          CCGGCGGTTCAGTCC  57 34
APT56_RS17105 3824273 .. 3824283 -  -6.8   -3.5764   AATTTTAGGGGGAAA                 TCCG CCG CGGA                 TAGGTGACGGGAAAG  59 92
APT56_RS17100 3822942 .. 3822976 - -11.3  -3.67296   CATTATCGACGCAAA    GCG-GCGGGCCGACCG CCAC CGGCCGCCTCGCGCGC     CCGCCACGCCGGCAG  74 81
APT56_RS17095 3821687 .. 3821726 -  -7.3   -3.4072   CAGCCTCGACCACAA CCTGGACGT-GGTC-GCG GCTTTCA CGCTGACCGACG-CCAGG ATCACCAAGAGCAAC  58 407
APT56_RS17070 NONE
APT56_RS17065 NONE
APT56_RS17060 NONE
APT56_RS17055 NONE
APT56_RS17050 NONE
APT56_RS17045 3812148 .. 3812183 -  -3.8  -3.19157   CAGGAAGTGCAGGAA    GGCCGCCT-GGGCATCG CCG CGCTGCGCGATCCGGCC    ATGGGACGCATCATC  45 171
APT56_RS17010 3803228 .. 3803243 -    -6  -4.07568   CGCGCCCTGGCAAAA              GGCGCG CGGC CCCGCC               GACCTAGCGGAACCG  66 29
APT56_RS17005 NONE
APT56_RS17000 3801446 .. 3801458 -  -7.7  -3.18681   GGCCAACGCCATCAA                CACCA GGC TGGTG                GTGCGCCGCAGGGCG  57 362
APT56_RS16995 3796369 .. 3796400 - -11.5  -2.52623   TCGCCGCGATAACAG      GCGCGCCCGGC TATGGCCCGG GCCGTGCGCGC       TCGCCCGGGCCCGGG  61 92
APT56_RS16980 3793637 .. 3793677 -  -6.6  -4.19817   CGGATTCACTCAAAA TCGGTAGCGCGGCCGCGTC AGGC GGCGCGGCCG-GCGGCCAG  CAGCACGTCCTGGGC  68 2
APT56_RS16975 NONE
APT56_RS16970 NONE
APT56_RS16965 NONE
APT56_RS16960 3789512 .. 3789559 -  -4.1   -3.4878   GTACACCACAACGAA CACCGTCGTAGCCAAACATAG CCATTT CCATGTTTGAACCCGACGTCG CGCTTGAACTGAAGA  51 187
APT56_RS16955 3788437 .. 3788449 -  -2.7  -3.70444   AGTTAATAAATAAGA                CAAAA TAA TTTCG                ATGCGGCACCGGCGC  53 518
APT56_RS16940 NONE
APT56_RS16935 3786664 .. 3786678 -  -4.2  -2.97747   GGCGGACATGAGACA               CGGC GGGAAAT GCCG               TCAAAGCGGGGATCG  44 120
APT56_RS16930 3784617 .. 3784644 -  -6.8  -3.35046   GGACGGCCTCAAACA        CCTGCCCGCCCC CATC AGGGCGGGCTCA         AAGCGAATCCTAGAG  55 125
APT56_RS16920 3779988 .. 3780020 - -13.4  -3.31144   CGCCTATCCGGAGAA      GAACGAGGGTGAGC CATGC GCACACCCACGTTC      GGTTCAGACTGCGCC  77 43
APT56_RS16900 3772615 .. 3772634 -  -5.6  -3.02144   GGATCGTGGGCAATA            GCGCGACGG AAC CCGA-GCGC            ACCGGCGCGGAGCCG  46 323
APT56_RS16860 3765102 .. 3765117 -    -6  -3.02144   GCAGGTGTTCGAAGA              CCCGGC CACG GCCGGC               ACCACCGCGCGCGAG  48 373
APT56_RS16805 3752359 .. 3752376 -  -9.1  -4.15222   ATCCGGGTGAAGAAA             GTCAGCG CCTT CGCCGAC              CGTTGCGGCGAATGG  75 155
APT56_RS16780 3747050 .. 3747066 - -15.1  -4.15044   CGCTCCCCCAATAAA              GGCGCGG GCG CCGCGCC              CCGCTTCCGCTAAGG  95 35
APT56_RS16760 3745297 .. 3745315 -  -9.6  -3.16055   GAAATCGGCCATCAA             GCGTCCAT CCC ATGGACAC             CACATCTTGTTATCT  60 260
APT56_RS16745 3741587 .. 3741607 -  -5.4  -3.79138   AACAGACGCAGGAAA            CCTGCACC CTGCT GATGCAAG            CCAAGCCGCTCGAAG  58 409
APT56_RS16720 3736690 .. 3736736 - -16.6  -4.86731   TCGCTGTAAATAAAA CCGCACCGGCAGACCCGC TGACTGATTTT GCGGTTCTGCCGGTGCGT GATGCATGACATTGT 100 58
        guaA 3735009 .. 3735022 -  -9.5  -5.95539   CTGCAAATAAAAAAA               GGCGC CGAA GCGCC                TTTTTCATTTACCGT 100 59
APT56_RS16710 3733769 .. 3733786 -  -3.3  -3.70902   CTGGCGAGATTGAAA             GTGGGCA AAAT CGCCAAC              GGACTCTTCTTGCTC  55 450
APT56_RS16690 3729961 .. 3729999 -  -2.4  -3.54543   ATCCAGCTCGCGAAA  GCCATCGGCGCCAGGGTC TACAC AACCGT-GCGC-GAAGGC  AATGTCGAATTCGTG  50 496
APT56_RS16670 3726984 .. 3727024 -  -9.6  -2.78384   CCCGTGGCGATGACA CCCGCGGCG-C-CCGCCCCC GGG GGGGACGGTGGCGCGACGCG AGCGTCGTCCGCCCG  56 134
APT56_RS16665 NONE
APT56_RS16660 3725214 .. 3725238 -  -4.1  -3.04461   CATCGACTGGCAAGA          CGCGCCGTCAC AAA GTCATGGCGGG          CTGGTCTTCGATACG  45 8
APT56_RS16655 3723469 .. 3723489 - -13.9  -3.14132   CTGGTCGGCGAGCAA            GGCGGCGCG ATC CGCGCCGCG            CTGGCCAGCCAGGGC  72 494
APT56_RS16645 3721567 .. 3721585 -  -5.9  -4.09685   CCGGATCGGGCAAAA             TGCGGGC TGTCG GCCCGAA             CGCGCGGGAGCGCCG  66 360
APT56_RS16640 3720676 .. 3720697 - -17.3   -3.9941   GCGCCCAGAATGAAA           CAGGCCGCC CGAG GGCGGCCTG            TCGAATGGAAGAACC 100 205
APT56_RS16630 3718964 .. 3718974 -  -2.4  -4.05788   TCTGGTGAAAGGAAA                 CGAG CCG CACG                 GAAACACAGCCTGAC  57 108
APT56_RS16625 3717818 .. 3717865 -    -9  -2.80816   TGCTCACGCAGCAGA CCGGCATGAGCTTCGGCCGCTG GCGG CAGCAGCTGCACCTGATGCGGG CGGTGAAATGGCTCG  52 193
APT56_RS16615 3717363 .. 3717392 -  -2.9  -4.67038   CCGGGAAAACCAAAA       TTGTAGGC-GAC CCCGCCC GTCAGCCTTCAA       TCCCGCCCCGTCTTG  72 52
APT56_RS16610 NONE
APT56_RS16605 3716252 .. 3716273 -  -7.1  -3.40611   GCGATGTCAAGAACA           CGGGCAGCC GTTC GGCGGGCCG            CTTCCAGGCCTGCGC  55 63
APT56_RS16600 3715186 .. 3715198 -  -3.3   -2.9914   CACGCCGGAGACAGA                CGTGG CCG CCAGG                CGAAGCCGGGGCGCG  42 65
APT56_RS16595 3714386 .. 3714403 - -10.5  -2.81547   CTGGGAGACCAACGA             CGGCGCG CTGG CGCGCCA              GTGGGCGATTGCCGG  56 296
APT56_RS16585 3711883 .. 3711904 -  -6.5  -3.70902   GCTTCGAGATCGAAA           CCACCGCCT ACGA AGGCGACGA            AGCCGCCACCCGCGC  61 491
APT56_RS16575 3709910 .. 3709922 -  -9.1  -2.83747   GAAGCCCGACAAGGA                CAGCG CGG CGCTG                CGCGACGGCAGCGTC  53 519
APT56_RS16565 3707678 .. 3707696 -  -7.4  -3.69094   AATTCATCATGGAAA             CGGACATC CCT GATGTGCG             CAGCGCGACGCCCGC  64 257
APT56_RS16555 NONE
APT56_RS16550 NONE
APT56_RS16545 3703034 .. 3703055 - -15.9   -5.0538   CCCCAGGCCAAAAAA           TTCGCCCGC CGAA GCGGGCGAA            TTCCATCGGGGCGCC 100 69
APT56_RS16540 3702164 .. 3702180 -  -9.4  -2.51471   CAGAACCTGATCAAT              CGCCAG TGAGC CTGGCG              GGGCGCGTCAGCGCG  55 33
APT56_RS16525 3700530 .. 3700543 -  -5.9  -2.94199   TATCCAGTAATCATA               GCAGG CCGC CCCGC                CCGTGGAAGCCTCGG  48 48
APT56_RS16520 NONE
APT56_RS16515 3696454 .. 3696471 -  -4.8  -3.53811   GCGAGTTCGCGCAAA             GGCGCCG GGGCG CGGC-CC             TAGTCCACCCGCCAC  53 25
APT56_RS16500 3693212 .. 3693248 - -16.6  -3.24747   GCCGCACAGGACCAA   GCCAGGCCGCCCG-CCGA TGA CCGGGCGGACGGCC-GGC   GCGGCAATGCCATGG  89 56
APT56_RS16495 3692173 .. 3692212 - -11.3  -2.66435   AGGCCGACGATACTA  CGCCAATGCCGCGCGGGC CGCGC GCCGGCGCCGC-CCGGCG  CGATCCGGCCGGAGG  62 83
APT56_RS16490 3690507 .. 3690541 -  -2.8  -4.67755   ACAGCTACGGAAAAA    CAAGGGAAACC-CCG CATTCC CGGCGGGTTCCGTCG     GGAAAAAGCAAAGTC  72 142
APT56_RS16485 NONE
APT56_RS16480 NONE
APT56_RS16475 NONE
APT56_RS16470 NONE
APT56_RS16465 NONE
APT56_RS16460 NONE
APT56_RS16455 3681419 .. 3681446 -  -4.8  -2.70932   CCTGGCCTGGAACCA        GCCGTTCTGGC CCGCTTC GCC-GTACGGC        ACCTGGGGCATCCTG  43 465
APT56_RS16425 3675202 .. 3675222 -  -6.7  -2.87132   GCCCGCCGCCATAGA            CTGGCCGCC CGC AACGGCCTG            ACGCCGCCCGCCCCC  49 46
APT56_RS16390 3667082 .. 3667103 -  -8.6  -2.77899   CTGGTGGATGAAGGA           CGGCGGGC GCGTCA GGCCGCCG            CCTTGGCCTTCGGTT  53 15
APT56_RS16385 NONE
APT56_RS16380 3663404 .. 3663415 -  -7.2  -3.18264   TGCGGGATGCAGCAA                CGCC CCTC GGCG                 CCGGGCAGGCGTCGA  54 123
APT56_RS16375 3661898 .. 3661918 -  -8.2  -3.70902   GCCGGCATAGGGAAA            GCCGGCAT AGGGA AAGCCGGC            TTATGGACAACCGGC  67 92
APT56_RS16360 3658547 .. 3658571 -  -5.6  -3.65046   GGTGTATCGCAAGAA          GGCCTGACAC GTCCG GTCTCGGGCC          GCCGCCGCGGTCGCC  57 85
APT56_RS16345 3655636 .. 3655648 -  -6.9  -4.07885   GACGTTCGGCGAAAA                GCGCA CCA CGCGC                TGGCCCGACGTGCCG  66 364
APT56_RS16310 3645617 .. 3645631 -  -7.8   -3.6579   AATGGATCGGAACAA               CGCCTA CGC CAGGCG               CGATGGGCAAGAGAC  63 404
APT56_RS16305 NONE
APT56_RS16300 3643676 .. 3643695 - -11.4  -2.97747   GCCTTATACCAGAGA            CGCGCGCCC GCC GGGC-CGCG            TTCAATCGGCCAGCA  65 27
APT56_RS16295 3642346 .. 3642373 -  -6.8   -2.7535   GCGTTCAAGACAGGA        CGGCCGCCAACG CCGA CGATGGCGGCTT         TTGCCGAGGAACCGC  46 523
APT56_RS16280 3639918 .. 3639930 - -10.5  -3.29471   CGTCCAGCATACCAA                GCCCG CCG CGGGC                CGGGCTCAATCACCG  65 31
APT56_RS16275 3638454 .. 3638470 -  -5.7  -3.41024   CTGCCGAAGACAATA              GCACCGC GCC GCGCCGC              TTCGCCAGCAATCTT  53 96
APT56_RS16270 3637396 .. 3637449 -  -4.4  -2.71364   CTATCTCGCCAACCA GTACGGCGCC-GGCCGCGAACAG CCGCTGTAT CCGTCCGAACCCCGGCGCCGCGC CCGCGTCGACCAATG  40 403
APT56_RS16235 3631616 .. 3631648 - -10.3  -3.05715   AACCGCCGCATCGAA      TTCCGCGCCAGCCGC TGA GCGGCGCGCGCGGCC      GGCGCCGGCGCGCGT  63 134
APT56_RS16205 3622629 .. 3622654 -  -3.2  -3.75863   AAAACCTTGATCAAA         CAGGCTCACG GTTCGA CGTGAGATTG          CGCGTTGGGACATTC  54 5
APT56_RS16200 NONE
APT56_RS16195 NONE
APT56_RS16190 NONE
APT56_RS16185 NONE
APT56_RS16180 3614840 .. 3614866 -  -6.5  -3.06261   TCCGAATCGTGAATA         CGCGGTAGC CCGAGCGTT GCGACCGCG         TCGGCTTCAACCATT  51 32
APT56_RS16145 NONE
APT56_RS16140 NONE
APT56_RS16135 NONE
APT56_RS16130 3602112 .. 3602135 -   -21  -4.37092   ACCTCTTTCAGAAAA          CCGCGGCCCG CAGA CGGGCCGCGG           CCTTCGCCTTGTCGC 100 51
APT56_RS16125 NONE
APT56_RS16120 NONE
APT56_RS16115 NONE
APT56_RS16110 NONE
APT56_RS16105 NONE
APT56_RS16100 NONE
APT56_RS16095 3589757 .. 3589771 -  -7.8  -3.25088   GGTGAAATCCATCAA               GACCCT CCC AGGGCC               ACGCGCAGGCTGTTC  57 7
APT56_RS16090 NONE
APT56_RS16085 3587220 .. 3587264 - -20.7  -2.76322   GGATGGAACAGATCA CCGCGGC-CGCGGCGCCCCC GTCCAA GGAAGCGCCGCGCGCCGCCG CCAAGAAAAGCGCGC  83 175
APT56_RS16050 3578164 .. 3578175 -  -3.6  -3.53012   CTCGGCCGCCTCAAA                GCAC AAAC GCGC                 GCAAGTTGGCGACCC  49 9
APT56_RS16040 3575165 .. 3575177 -  -6.2  -3.03159   CGAACTGGCCGAACA                CGCC CAACT GGCG                CTGGCCTTCGGCAAG  48 249
APT56_RS16020 NONE
APT56_RS16015 3571899 .. 3571916 -  -8.3  -3.53091   AGCGCCGCGTCGAAA             CCCGCCC TGCC GTGCGGG              CCGCGCTGGCCGCGG  61 109
APT56_RS16005 NONE
APT56_RS16000 3569803 .. 3569821 - -11.6  -2.91728   ACGGGCAAGACTACA             CGAGCGCG GCG CGCGCGCG             CCAACCCTGTGCGGC  65 61
APT56_RS15995 3568851 .. 3568899 -   -10  -3.86897   CTTATCGGCGACAAA CGCCCGCCTGCAGCGCCCGGCGG CGCA CCGACGCGCGC-GCCGGCGACTG TCCCGCCCACCTCGG  75 81
APT56_RS15985 3566571 .. 3566588 -  -9.1  -2.78384   GCCGTTCGCATGACA             GC-CGCCG CAT CGGCGCGC             CGCGGCCGGATCCCG  56 44
APT56_RS15980 3565409 .. 3565420 -  -4.4  -4.25283   ACGCCTTCATGAAAA                CAAC AACG GTTG                 CCCTGGCCGCGCTGG  67 459
APT56_RS15925 3555625 .. 3555662 - -10.6  -3.53012   GCTTCCTGGCCGAAA  CCGGCCTGACGCTGGGCGC CTG GCGCC-AGCG-C-GCCCGG  CTGATGCGGGCCCAA  65 213
APT56_RS15915 3554550 .. 3554598 -  -6.7  -3.34902   CCTCATCATAGAACA GGCCGC-CGCCCTGCCACGCCC-GC CGC GCTGGGCGGATCAGG-CGTGC-GCC GCCTCGCGCGGCCGC  55 68
APT56_RS15910 NONE
APT56_RS15905 3553375 .. 3553387 - -10.5  -3.21099   CCGGTGCAGTACGAA                CCGGC GCC GCCGG                TCAATCAGGCGCAGG  60 304
APT56_RS15890 3551708 .. 3551720 -  -6.9  -2.52464   CCGCCGGCCAACGCA                GCGCC GTC AGCGC                TGCAGCACCCCTTGC  47 19
APT56_RS15880 3549396 .. 3549414 - -10.3  -4.07568   GCGCGCCGCTGAAAA             TCCCTGC GCCGG GCAGGGA             CTCCACGCGCGGCAC  79 53
APT56_RS15875 3548055 .. 3548068 -  -5.9  -3.01712   CCGCGCTGCTCAAGA               CCGGC AATG GCCAG                CCGTGGCTGATCTGC  48 213
APT56_RS15860 3543980 .. 3543992 -  -3.3  -3.35679   GTTCGTCACCGACAA                CCTGA TGG TCGGG                GGCCTGACGACGCTG  47 140
APT56_RS15840 NONE
APT56_RS15835 NONE
APT56_RS15830 NONE
APT56_RS15825 NONE
APT56_RS15820 3534925 .. 3534950 -  -5.3  -2.62184   CCTTCTGCTAGATCA         TGGCCGGCGCGC CGC GGGCGCCGGG-A         CGGTTCATACCTTCA  43 30
APT56_RS15815 NONE
APT56_RS15810 NONE
APT56_RS15805 NONE
APT56_RS15800 3530126 .. 3530155 - -11.4  -3.19026   CACTCCAACAGGTAA       GTGC-CGGGCGGC GATAT GCCGCCCGCGCAA       CGTCCCATTGAACCG  68 46
APT56_RS15795 3529674 .. 3529707 -  -4.5  -3.05343   TGGACAGCGGGAACA     GCGGAAT-GGTCGCCA TGG CGGCGCCCTATTTCAC     GGTGAAGGCGTCGTC  45 17
APT56_RS15790 NONE
APT56_RS15785 3528035 .. 3528057 -  -4.1  -3.30124   TGGTATTCGGGAGAA          CTTGGCGCGC TCGA GTGC-CCAAG           CTGTCGACACTCGTA  49 216
APT56_RS15780 3526607 .. 3526631 -  -4.1  -3.78775   GCTGCGACGAGGAAA          CTGACGACGAC GAG GACGTCGTCCT          GTCGACCAACGATTG  55 372
APT56_RS15770 3524461 .. 3524491 -  -7.7  -2.70932   GCCGGCCCGTAATGA       GACGTACTGAT CAGGCCAAC ATCAGCACGTC       GCGCTCGCCCGGCCG  51 5
APT56_RS15760 3522301 .. 3522317 -    -3   -3.6215   TCAATGTATCGGAAA             CCTAGTC GCCC GAC-AGG              ACACATTTTCATGGC  51 77
APT56_RS15755 3521629 .. 3521659 -  -2.5  -2.72508   ACAGACGATACAGCA      CGACTAC--CGCGGC CGC GGCGCGACGTTGTCG      AACAAACCCAGCGGC  38 229
APT56_RS15750 3520905 .. 3520936 - -10.8  -4.66987   GAGAGCGGAAGAAAA      TCCGTGAGAGGAGCG TTG CGC-CCGCTCACGGG      GCAAGTGCAGATCAG  91 70
APT56_RS15745 NONE
APT56_RS15740 3519166 .. 3519193 -  -2.6  -3.05844   GCCCCTACCCCAAGA        CAGTTCACCGCCG CCC CGGCAGC-ATCCG        CACCAGCGTGTTGTC  42 2
APT56_RS15730 NONE
APT56_RS15725 NONE
APT56_RS15720 3515724 .. 3515750 -  -7.4  -3.43203   TGACCATAAGATGAA         CAACATAAAATG GTA CATCTTAAGTTG         CATAAAGCACTATAA  60 154
APT56_RS15710 3506674 .. 3506690 -  -2.1  -2.66042   AACACGCATTACAAG              GCCTCGC GGC GCGATCC              TCAAAACGATATAAA  38 74
APT56_RS15705 NONE
APT56_RS15700 3504629 .. 3504661 -  -4.7   -5.7946   GTTTGAACAAAAAAA     CAGAACCGGCCCGC TCGTTG GCGGGCCGGG-CAA      CAATCAGGCGAGCTT 100 29
APT56_RS15695 3503748 .. 3503775 -  -4.8  -3.35867   CGAAGCGTCAAGTAA        GCTCATTGCGCGG GCA CCG-GCACTCAGC        CCGCGATGGGGCCGA  51 21
APT56_RS15690 NONE
APT56_RS15685 3502373 .. 3502395 -  -6.3  -3.33737   GATGAATTCCGATAA          GCG-CA-GGCC CTA GGCCATGGCGC          GCTGGCGGCGGATGC  53 12
APT56_RS15680 3501485 .. 3501531 - -11.6  -3.85698   GTCGGTCGGCAGAAA CGTCGGGCGGCCGAACCGG-GCC GGTC GGCGCCGATCC-GCC-CCCGCCG GCACCGACGCATCCA  79 117
APT56_RS15675 3499918 .. 3499928 -  -3.2  -3.90744   GCCTTGGCCAAAGAA                 CAGC GCA ACTG                 GGTTAAATACGCTCG  58 521
APT56_RS15645 3493637 .. 3493668 -  -3.6  -4.72272   CGGCTCTACGAAAAA      CACCTGACGCCGGAC GAG GCCCGGT-TCATGCG      GGCGCATTATCACGA  77 468
APT56_RS15615 3484857 .. 3484870 -  -8.1  -2.82623   GCTGGGCCAGAACTA               CCAGG CCTT CCTGG                ACGAGCGCATCGACT  50 374
APT56_RS15605 3482636 .. 3482669 -  -2.9  -2.61695   GGTATCCGCAAATAC     CGGCGTCGCGC-GCCT TCA ATGCAGCGTGGTGCCG     TCGGGCGGCGACTGG  39 7
APT56_RS15600 3481483 .. 3481511 -  -7.9  -3.73953   AGGACGTGGAGGAAA        TGCGCCGGCGCCG CCA CGCCGCCAGCCCG        ATGGGCCGCATGGGC  64 276
APT56_RS15540 3469246 .. 3469267 -  -8.1  -2.76189   CAATTTATCGAATCA           TATATCGAG ACAT CCCGATATA            TCGTTATACCCCTGC  51 76
APT56_RS15535 3468838 .. 3468863 -  -2.4  -2.87622   CAGGCTCATAACAAT         CCTCGTGCCCG GCGGG CGGGCGTG-GG         TAGCGGCGGCAGGCT  40 39
APT56_RS15530 3467726 .. 3467770 - -15.7  -3.64703   CGCGCTGCATTGAAA CGCCCAAGCCGCTGCCGACC CGTCGT GGCCGGCAACGGCGCG-GCG CTTCAGGCCGTCGCC  90 28
APT56_RS15520 3466039 .. 3466055 - -11.5  -2.53747   CAACGTGCAGAACAG              CGGCACG GCG CGCGCCG              TGTTCGAATGGAAGT  62 114
APT56_RS15465 NONE
APT56_RS15460 3454002 .. 3454047 - -16.3  -3.17075   GCGGTTGCAACGGAA CCCCGCGCTTGTGTCAGAA AGTATCAA TTCTGACACAAGCGCGTGC GATTTCGGCGCAGTC  85 80
APT56_RS15455 3452946 .. 3453004 - -15.9  -3.02144   GCATGCTGGTCAAGA GCAGCG-GCCTGTCCGAAGCCCACGTGCG CTT CGC-CGCGCGCTTCGAGCTGGCGCGCAGC GCCGAGGACGTGCTG  78 379
APT56_RS15440 NONE
APT56_RS15435 NONE
APT56_RS15430 NONE
APT56_RS15425 NONE
APT56_RS15420 3446238 .. 3446254 -  -2.2  -3.53224   GATCGTCCTTCCAAA              CCGC TGATATCGC GCGG              GGTCTGCGCCCCGTC  47 39
APT56_RS15415 3444376 .. 3444396 - -18.3   -4.8622   TTTTGCAATGAAAAA            GCGCCACGG ACA CCGTGGCGC            TTCGGGATCGCGAAG 100 55
APT56_RS15410 NONE
APT56_RS15405 3443280 .. 3443300 -  -8.9  -3.89822   GACGCATTCCAGAAA            GCCGGCGAC ACC GTCATCGGC            AACGACGTCTGGATC  70 309
APT56_RS15395 3440937 .. 3440978 -  -8.5  -3.01712   GGTTCGCCGGCAAGA GCCTGCCCGGCGGCGCCGGC ATC GGCGGCTTCACCG-GCACGC CGTCCTATGCGTTTT  55 477
APT56_RS15385 3438761 .. 3438782 - -10.1  -3.14132   GGCCGCGGCCAGGAA           GCGGGCCGCC GCC GACG-CCCGC           CGCTAGCGCCCGGCA  63 99
APT56_RS15375 3437548 .. 3437566 -  -4.4  -3.54424   GCCCAGCCGCTCAAA             GGCGTCGA TGA TCTGCGCC             GGGGACAGCGCGGCC  51 69
APT56_RS15370 3436218 .. 3436244 -  -5.7   -3.6682   GCGTACGCAGTGAAA        GGC-GCGGCGGG GATC CCCGCTGATGCC         GGCGGCGCGACGTTC  57 39
APT56_RS15360 NONE
APT56_RS15355 3433015 .. 3433032 -  -8.3  -2.90392   CACCCGCCAACTACA             CGGTGCC GGAC GGCGCCG              CCTTCCCGTACTACC  55 421
APT56_RS15320 3427284 .. 3427322 - -21.7  -3.05384   CCGCGCCCGATGGAA   CAACGGCCCGGCCGGCA TCGTG CGCCGGGCGGGCCGTCG   GGACGCCAGCTTGTG 100 81
APT56_RS15315 NONE
APT56_RS15310 3423180 .. 3423201 -  -6.5   -4.1337   CGACAGGAGAAACAA           CGGGAG-GCG ACA CGCCCTGCCG           CCGGCTTGCGCGCAG  68 268
APT56_RS15305 3421915 .. 3421955 - -12.5  -3.15544   GCGTAGCCGGACGAA GCGGCAGGACGGCCACGC CCCGGC GCGCCGCCGCCCCGCC-C  ACGGGCGCGATGCGC  69 94
APT56_RS15290 NONE
APT56_RS15285 3415715 .. 3415725 -  -2.4  -2.53346   CCAGAAACTCAAGAT                 TGGG ACT CCCG                 TCCATCGACGTGGTC  38 8
APT56_RS15280 NONE
APT56_RS15275 NONE
APT56_RS15270 NONE
APT56_RS15265 3412799 .. 3412837 -  -4.3  -3.28217   GAAAAGAAGATTGAA   CCCGGACGGCGCGGGCC TCGTG GACCGGCGCCATCTGCT   TGATACAACTATCCC  47 173
APT56_RS15260 3412234 .. 3412248 -  -9.2  -3.53012   GTGGCCGCGGGGAAA               GGACGC GCC GCGCCC               TCCCCTGGCCCGCCC  65 48
APT56_RS15255 NONE
APT56_RS15250 NONE
APT56_RS15245 3409712 .. 3409733 - -18.7  -3.60098   AGCCCGGATGGCAAA           CCGCCCGGC GCGG GCCGGGCGG            TCGGAAAAACCGGGC  93 52
APT56_RS15240 3407939 .. 3407995 -  -5.5  -2.79183   TTTACCCGGATGATA GCCCAGCAGGGTTGCGGCAGGCTGA ACGCGCG CCAGCCCGCCGCGTGGGCGCGGGGC TCAAGGCCCCGGTTG  47 41
APT56_RS15235 3406622 .. 3406633 -  -4.4  -3.79787   TTATATGAATCCAAA                CGAT CAAT ATCG                 AATGTTCTTAAGACT  56 62
APT56_RS15230 NONE
APT56_RS15225 3404721 .. 3404739 -    -3  -2.72511   TCGATGCGCTCAAAG             CTTGCGAG CCT CTTGCCAG             GACAGGTCGACGATG  40 1
APT56_RS15220 3403920 .. 3403940 -  -3.1  -2.82516   GCGCCGATCAGGAGA            CGAAGCGCG CGC CGCATCCCG            AACCTCACACGTATT  41 30
APT56_RS15215 3403062 .. 3403088 -  -9.4  -3.59979   GCGCGCCATTGTAAA         GGCCGCGC CTCCCGGACCC GCGCGGCC         CGTGCGGACGCGAAG  68 58
APT56_RS15210 3402294 .. 3402352 -  -8.2  -4.56597   GTGTTCCGCGAAAAA GTGCTGCTGTTC-TCGCAGCCGGGCGCCC TGTC GGGCGGCCAGCT-CAACGAACTGCT-CAC CAAGATCAAGGAAGT  83 131
APT56_RS15195 3400094 .. 3400123 - -20.1  -4.19817   GGCATGCATGCAAAA       CCGCCGCGCTTCCG GTC CGGAAG-GCGGCGG       TTTTTTCATTGCCGG 100 56
APT56_RS15185 3397604 .. 3397619 - -11.8  -4.89477   CCCGGAATAACAAAA              GGGGGC CGAG GCCCCC               TTTTTCATTGTCCGT 100 42
APT56_RS15175 NONE
APT56_RS15170 NONE
APT56_RS15165 NONE
APT56_RS15160 3393468 .. 3393486 - -13.1  -4.09685   CGCCAGGCGTGAAAA             CGGGGCC CGGCC GGCCCCG             TCTGTCGAGCATGCC  89 61
APT56_RS15155 3392645 .. 3392670 - -18.3   -5.7946   CGCGCAACAAAAAAA         CCCCGCCCGCGC GAA GCG-GGGCGGGG         TTGGACTGACACCGC 100 99
APT56_RS15150 3391540 .. 3391588 - -27.5  -5.40072   CGCGTCCGAAAAAAA GGGGGACTTGCCGGAGACGGCCC GCC GGGCAGTCTCCATCAAGCCCCCC AAAGCCGGCGCCGGT 100 64
APT56_RS15145 3389901 .. 3389922 - -15.9  -4.70583   CCCAGTAAGACAAAA           GGGCAAGCC AACC GGCTTGCCC            TTCTTGCAGGCGGCC 100 60
APT56_RS15130 3386788 .. 3386825 - -13.4  -3.77953   TCAATAACCTAATAA   CCACCGCCAGGCTTTT TCTATC ATACGCCTGGCGGCGG    CGCGCGCTCACACGC  84 33
APT56_RS15125 3385908 .. 3385920 -  -9.1  -3.75153   CCGCGGCAAGGGAAA                GGGAC CCT GTCCC                CTTCCCGCCAGCATC  71 39
APT56_RS15120 3384253 .. 3384274 - -17.3  -5.63103   CTGGAACGAAAAAAA           GGGCTGCCC CTCG GGGCAGCCC            TTTTGCCTGGCAACG 100 45
APT56_RS15100 3378414 .. 3378462 - -11.7  -4.49756   CGCCAAAGACGAAAA CGCCCGGCTCG-TGCCCTTCCT GATGGA AGGTATCGCAACGAACCGGGCG ATGTTCCAGGCCGAC  91 162
APT56_RS15090 3377152 .. 3377169 - -12.7   -4.8622   TGCGCCAAGCAAAAA             CGCCACC TTCG GGTGGCG              TTTTCGTTTCAGGCT 100 82
APT56_RS15070 NONE
APT56_RS15065 3371374 .. 3371391 - -12.7  -3.12351   GGGTTCGAGATCGAA             GGCGTCG ATTA CGACGCC              GATGTCGACCCGGAC  68 125
APT56_RS15050 3368171 .. 3368191 -  -7.5  -3.63744   GCTTTCGGGAAAACA            CCTAGACGC GAC GAGCCTAGG            ACGGCACGCCGTCAC  63 21
APT56_RS15045 3366704 .. 3366761 -  -9.9  -4.13767   CGGGTCATGGGAAAA CCTCTGCGGCCGGATGCG-GCCT-CGAT GATGA ATCGCAGGCGCGCCGCCG-CCGCAACGG CGGACGGCGCGCGGT  76 46
APT56_RS15040 NONE
APT56_RS15035 3364749 .. 3364771 -   -22  -2.81966   AAAACGGAGGGAAAT           GGGCGCGGCC CGC GGCCGCGCCC           GGACAAATTGCCGGG 100 50
APT56_RS15030 3363973 .. 3364015 -  -9.6  -3.85698   TGGCGGCGTGAGAAA GGTTGGACCGGCGCGCCCCG CCC CGGGGCGCGTCATGGCAATC AGGGCGCCTGCCGGG  73 43
APT56_RS15025 3362474 .. 3362505 -  -9.3  -3.85698   CGTCGCGGGGACAAA      GCGGATATGGCGG AAAACA CCGCCCTGCCCGC       TCGCGCGGCGCGCTG  73 113
APT56_RS15020 3361479 .. 3361503 -  -7.1  -2.87683   ACATGTTGCGATAGA          CCCCGATCAGA ATT CCTTATCAGGG          TTTTGCCGGATGGCG  49 20
APT56_RS15015 3360333 .. 3360384 -   -12  -4.33808   GAAAGCAATGCAAAA CGCGGGGCG-CACGGCCCCGGGCCC GGT GGATCCGGGCCTGCGGCGATCCGCG ACCCGCCAATCGGCC  95 231
APT56_RS15010 3358993 .. 3359028 -  -4.4   -3.0395   AGAGAGCTTCGAACA    TGGAGGGCTCCTGTGG CGGG CCCCCGCGGCCCGCCA     CGGCTGATGATTACT  44 36
APT56_RS15005 NONE
APT56_RS15000 NONE
APT56_RS14995 NONE
APT56_RS14990 3355690 .. 3355711 - -17.3   -4.0162   GCCGCATAGCACAAA           GCCCGTCGC TCGC GCGACGGGC            TTTTTCCTGGGCCAC 100 50
APT56_RS14965 3350297 .. 3350311 - -11.4  -5.72616   AGGGACACAAAAAAA               CCCTCG TTT CGAGGG               AATACCCTAGCTCCT 100 123
APT56_RS14960 3349636 .. 3349665 - -10.7  -3.78934   CCTCGGGTACAAGAA       GC-CGCCACGGC GCTGCCG GCCGCGGCGTGC       GGGTGGTGGTACGGG  74 59
APT56_RS14955 3345822 .. 3345864 - -18.7  -4.11216   TCCGGACGGCGAAAA CACGCTCGCCACCG-CGATCT TCG AGATCGGCGATGGCGAG-GTG ACGCTGCGGGTCTAT 100 152
        glnH 3343961 .. 3343992 -  -6.7  -3.40601   GAAATGCAACATCAA      TCCGGCGAAAAAGC TCAGG GCTTCTT-GCCGAA      CCACTTCTCGTAGAT  55 8
        glnP 3343147 .. 3343163 -  -5.1  -2.82602   CATGAAATTCAACCA              TGCTCAT AGT ATGCGCA              TCCTCTTTTCCACCA  45 12
        glnQ 3342219 .. 3342229 -  -6.8  -2.72991   CGACAGCCGCAAGCA                 CCTG GCG CAGG                 TGATCCGCGCGATCC  46 221
APT56_RS14905 3336143 .. 3336191 - -18.4  -4.64861   GCCCGGCAAAAGAAA GCGACCCTCAACAAAAAAGCGCC CGAA GGCGCTTTTTTGTTGATGG-CGA AGCCCCGGTCAGCCG 100 34
APT56_RS14900 3333683 .. 3333695 -  -4.7  -4.11216   CCGCGACGCGTAAAA                TGCCG CGG CGGCG                GGCGATCCCCCAGCG  64 464
APT56_RS14880 3328349 .. 3328375 -  -7.1  -4.70659   CTTCAGAGCGAAAAA         GCCCCCGCGGA TTGTG CCCCCGGGCGC         CGTGGGATTTCCACG  82 134
APT56_RS14875 3326667 .. 3326703 - -24.5  -3.57792   CGAGTGACCCGCAAA    CGCCAAGGCCGCCGCAA TCA CTGCGGCGGCCTTGGCC    GGATGCAAGAAGGCC 100 62
         rph 3324711 .. 3324741 - -17.7  -4.98531   CCGGCAAACCAAAAA      CGGGATCAC-GCCG CGCT CGGCCGTGATCCCG       TTCTGTTTGGCGCGC 100 100
APT56_RS14830 NONE
APT56_RS14825 3316302 .. 3316327 -  -3.9  -4.57353   CTCCATTAGATAAAA         GGGTCGAG-GGC TGT GCCGCTCGACTG         GCATAAAAGAGGGAA  71 164
        glnA 3314715 .. 3314735 -    -4  -2.77233   CTACAAGGGGGAAAT           CGGCACACCG GTC CGGTG-GC-G           CTTGTGCGCGCTGCC  42 159
APT56_RS14815 NONE
APT56_RS14810 3311702 .. 3311715 -  -9.5  -2.62184   GCCGCGCCGACATCA               CGCGC TATT GCGCG                GTGGTGGTGGCCGAT  55 421
APT56_RS14800 3310204 .. 3310233 - -21.5  -4.21812   GCGTATCGAAAACAA       GGCCGGACGAACC GTCA GGTTCGCCCGGCC        GCCGGCCGTCAGGCC 100 34
APT56_RS14795 3309127 .. 3309182 - -23.4  -2.88579   TGAACGCCGGATAGA CGGCGAACCGGCCGGAGCCGCCAGGCG CATGT CGCCCGGCG-CTCCGGCCGGG-CGC-G TCAAGCCCGCGGCGG 100 26
APT56_RS14780 3305775 .. 3305803 - -14.5  -3.06183   CGGACGCTGATCCAA        GGGCCGCGCCC GGGGCAT GGGCGCGGCAC        GCGACGAACCGGCGA  80 88
APT56_RS14760 3300994 .. 3301017 - -19.6  -5.38054   CCGCAGAAACAAAAA          GCCCCGTCGC AGAG GCGACGGGGC           TTTTTGCTGGAGCGG 100 53
APT56_RS14740 3296695 .. 3296712 -  -4.1  -3.47941   CACCAACGACCACAA             CACC-GAG TTG CTCAGGCG             CCTGAACGCGGGCGA  49 475
APT56_RS14725 3294765 .. 3294800 -  -2.4  -3.34488   AACCCTGGGAAAAAC    GCGTGGAGGCGTTACAG GAC CAGGATCGCCTCGAC-C    TCGAACTGCGCGCCC  45 1
APT56_RS14720 NONE
APT56_RS14715 3291536 .. 3291549 -  -2.3  -4.52589   GGTTGGTAGACAAAA               CGAGG ATAA CATCG                CGATTGCGACAATCC  67 98
APT56_RS14710 3290936 .. 3290962 - -22.4  -4.72272   CCGGCGCATGAAAAA         GCCCCTGGGAAC AAG GTTCCCAGGGGC         CAGGCATATCATCGG 100 67
APT56_RS14705 NONE
APT56_RS14700 NONE
APT56_RS14695 NONE
APT56_RS14690 NONE
APT56_RS14685 NONE
APT56_RS14680 3280889 .. 3280922 -  -8.1  -2.65442   ACAGCACGTACACCA     GCGCC-AGCGCGACCG GGG CGATCACGATCAGCGC     ATTGACCCAGCGCCG  50 105
APT56_RS14675 NONE
APT56_RS14670 3277833 .. 3277880 -   -11   -3.1364   CAGGCAACCAGGCAA GCGCGCCCAGCCGGCCGCGCCCG CGC CGCG-GCGCCCTGCCCGCCGCGC CTTCCGTTGCATTCA  66 67
APT56_RS14665 3276401 .. 3276411 -  -6.8  -3.53012   GCGCCTTCGCCGAAA                 GCTG GGG CAGC                 CGGGTGGTGGTGATC  55 245
APT56_RS14655 3274488 .. 3274519 - -17.3  -4.18018   GCCGCCCACGGAAAA      GCCGGGCGGGAAG ACGCTG CTTCCGGCCCGGC       CGAAGGGGTCTGGCG 100 89
APT56_RS14650 NONE
APT56_RS14645 3272344 .. 3272354 -  -2.4  -3.55622   GTGAAGTTTGTTAAA                 GGCG GGC CGCA                 AGGGAGGGCCAGGCC  47 54
APT56_RS14640 3271087 .. 3271121 -  -9.1   -4.2558   GAGGTTGGAGGAAAA     CAGGGATGCGCCGCG TCGCG CGCGGCGCGGCACTA     CTCTTGTGGCGCGCC  81 23
APT56_RS14635 3269711 .. 3269751 - -10.9  -3.19192   CCTGATGGAAGTCAA  CGTGGCCGGCGACGGCACG GTG CAGACCGTCGACGGCCTGG  CGCTGGAGATCTCGC  64 429
APT56_RS14610 3264583 .. 3264599 -  -5.7  -3.54424   GCTCATGGGGGCAAA              GCGCGCC TTG GCCACGC              TCACTTGCCGAACTC  55 26
APT56_RS14605 3263881 .. 3263919 - -16.7  -4.01078   AAAACGCAGGAGAAA  TCCGCGCGGCGCC-TGCG ATAG CGCATGGCGCCGCGGGCA   AAAACATGGCGGGTG  95 155
APT56_RS14600 3262368 .. 3262400 - -16.4  -2.60496   TCTTGCTCCAAATAG      TTCCGGCTCCGG TAGAGAGAC CCGGAGCCGGAA      ACCTGGGCGTATTTT  81 163
APT56_RS14595 NONE
        livM NONE
        livG NONE
        livF 3258660 .. 3258682 - -11.2  -5.95166   CCCAACGAAAAAAAA           GGGCGCCCCT TTC AGTAGCGCCC           AAATTTCCCTTCGCG 100 62
APT56_RS14555 3253212 .. 3253265 - -15.1  -3.14881   GAAGGCCTGGAGTAA GCCCGCCAGGCCGGCATGAGCGGCCG GCC CGAACGCCC-CGCCGCCCTTGCGCGC CGGGGCGTTTTCTCT  80 62
APT56_RS14545 NONE
APT56_RS14540 3250618 .. 3250670 - -20.6  -2.94924   CGGTCAGCCACAAAC CGGGTCAGCGATCGCGCCACGCCCG TCGC CAGGCGCGGCGCGATC-CTACTCCG TCGGCGGCGGGAAAT 100 18
APT56_RS14515 3245837 .. 3245851 -  -8.5  -3.38991   ACGTGCGCAACAAGA               CCGCC GACCT GGCGG               TGGACCTGATCGAGA  59 86
APT56_RS14505 3243870 .. 3243890 - -13.9  -4.13767   GGTCGCAGGCGAAAA            GGCGGCGCG GCC CGGGCCGCC            GCTGCGGGCCGGGGC  93 129
APT56_RS14500 NONE
APT56_RS14490 3240742 .. 3240770 - -12.4  -2.80816   GCGTCACCGACTACA        GCGCCGGCGC CTTCGATCC GCGCCAGCGC        AGCAACCCGGCCGCG  63 369
APT56_RS14475 NONE
APT56_RS14470 NONE
APT56_RS14465 3232196 .. 3232228 -  -3.4  -4.91109   GGGCCAGCAGAAAAA     GACCCAGGATCAGGC GGCC GCCTGATCG-AAGCC      GGTCAGCAAGCATGA  78 77
APT56_RS14460 3231470 .. 3231482 -  -4.7  -3.64703   TCGCCTCGATCGAAA                CCGTC TGG GCCGG                GCTGGTCACGCCGTA  54 239
APT56_RS14420 3222793 .. 3222812 -  -7.2  -4.20918   GCCAACTCCAACAAA            TCGCACCTG CGC CAGGT-CGA            CGTGGCGCGCGACAT  73 316
APT56_RS14410 3219957 .. 3220015 - -10.2  -3.36452   ACGCTGCAATACCAA TCGACGCCGGCGCTGCGCGAGGCCGCT TTCCTG ACCGCCCTGGC-CAGCAACGGCACCGA CTACCCGTTCCTGGC  63 496
APT56_RS14395 3216317 .. 3216355 -  -7.5  -3.35934   GCAGACATGCGAGAA  CATCAGC-GGCCTGCG CAGTGAAT CACAGGCCCGATGATG   ACGCGCCCGGCCCCA  58 9
APT56_RS14385 NONE
APT56_RS14380 3211605 .. 3211617 -  -4.7  -2.57468   TGCCATGACAGCAAT                CGCCG TGC CCGCG                TCGCTTCGCCCCGCG  43 97
APT56_RS14375 3211141 .. 3211183 -   -15  -5.05782   ACTGAGCCCAAAAAA CAACTCCCTCCGGCGGCACA GGGAA CGT-CCGCCGGAGGGAGC-G CAGGAGCGGGCGTCA 100 52
APT56_RS14360 3206713 .. 3206737 -  -4.2   -4.4078   GGCGGGCAAGGAAAA         GGCCGAGGCCA ACCA TGACG-CGGCC          AAGGCCCGCAACGAC  70 159
APT56_RS14350 3205986 .. 3206002 -  -2.1  -4.56775   ACCGGGCCGGAAAAA              CACCCCG GAT CCGGACG              GGTCCGCGCCAACGT  67 44
APT56_RS14340 NONE
APT56_RS14335 3204172 .. 3204189 - -12.7  -3.14468   GGCCAGGATACCGAA             CTGGGCC GGCC GGCCCAG              CCGGAGGAAATCTCG  68 153
APT56_RS14320 3202389 .. 3202438 - -11.3  -3.14931   CTGAGCGCCGACGAA CGCCG-GTTGCTGGCCTTCCTGCG CAA CGCATGACGGCCAGGGACGCCGCG GCTACAGGATGGAAG  66 27
APT56_RS14310 3200223 .. 3200255 -  -7.6  -3.85698   CCTGCCCGGGATAAA      GCGCCGCTACAGCC GTCCT GTCAGTAGCAGCAC      GATCAACACGATCAG  67 481
APT56_RS14300 3197465 .. 3197478 -  -3.7   -4.2828   CGTGAGCCAGGAAAA               CCCCG AGGA CGTGG                AGGCCGCGCACGAGG  67 515
APT56_RS14285 3193612 .. 3193634 - -10.4  -3.93236   CATGAAGGGTAGAAA           GCGCTGCCCG CGG CGGGCGGCGG           TGAGCCGGCCCTTAC  75 37
APT56_RS14280 3193161 .. 3193193 -  -9.1  -3.14132   GGCGCGCGCCAGGAA     CGTCGCGGGC-GCGC ATGCG GCGATGCCCGCG-CG     GGGGGGATCCGCGCG  60 116
APT56_RS14275 3191383 .. 3191432 -  -4.8  -4.61231   TCACATCCGCAAAAA CAACCTGGTGACGC-GCGACCCG AACGA CCCGTCGCTGCGCATCCAGGTGG GCGAGCAATCCTCGC  75 488
APT56_RS14235 3181632 .. 3181654 - -12.7  -3.53012   GGCGCGGCGGGGAAA          GCG-CCGGGC CGCC GCCCGGACGC           GGCGCGTCAGGCCGG  78 32
APT56_RS14220 3165092 .. 3165104 - -10.5  -4.07568   TGCCTTCCTGCAAAA                GCGCG CGC CGCGC                TGGCGCCAGTGACAT  79 84
APT56_RS14205 NONE
APT56_RS14195 3160994 .. 3161004 -  -4.6  -3.32844   GGCCGTACGCCACAA                 GCAC AAG GCGC                 GGGCGGCCTTGCAGC  49 127
APT56_RS14160 3153711 .. 3153751 -    -6  -3.53444   CGAGGTGGGGCCAAA CGAGGCGGTGATCGTGGCC GAGC GGCTGCG-TCAGCGCATCG  CCGATCGCGACATCG  55 203
APT56_RS14145 NONE
APT56_RS14140 3149795 .. 3149816 - -11.5  -3.06162   CAGTTGAGGTCAACA           GGCGAAGGC GTGC GCCGTCGCC            TGCTCTCCATTTCCC  66 54
APT56_RS14135 NONE
APT56_RS14125 3144493 .. 3144512 -  -6.4  -2.99947   GAAGCGCTACACATA            CCTGGC CGGCGTGC GCCAGG             AGCGCCTTGCCGGCG  50 295
APT56_RS14120 3140195 .. 3140222 -  -4.1  -5.00616   CGGGGGCGGAAAAAA        CGAAGGAACGGG CGCCC CCCGT-CCATCA        GGCAACGCATCAACG  82 101
APT56_RS14100 3136198 .. 3136250 -  -5.2  -2.56596   CCGTGTACGAATTTA TCCGAACTTCGCCGGCCGTGGCGCG CCGC CGCGCCTCAGGCGCCGTTG-CCGGG CGTGTCCTCGCCCGC  43 8
APT56_RS14095 3134947 .. 3134978 -   -10  -5.12707   TGAAAGGCGAAAAAA      GACCG-GCCCCGCGC GGC GCCCGGGGCGCAGGC      ATGGGGCCTGGAGCG 100 99
APT56_RS14090 3133753 .. 3133790 -    -9  -3.21912   GGCGCAAGGCAGGAA   CGGCCATGTCGCGGCG CGGCGC CACGGCGGCATTGCCG    CCAGGGGCCTCCTGG  59 360
APT56_RS14085 NONE
APT56_RS14080 3131574 .. 3131599 -  -6.7  -3.17392   CACCGGCGAAGTCAA         TGGCGCCACCA TCCG CGGCAGCGCCG          CCGGCAAGGGGGAAT  50 57
APT56_RS14015 3117193 .. 3117226 - -11.5  -3.14344   CAGGCGGTGGAGGAA     GGCCGCGCCCTGCTG GCGC CGGCGCGGCGCGACC      CCAAGGCCACGGTGG  64 507
APT56_RS14005 NONE
APT56_RS14000 3114778 .. 3114788 -  -2.4   -2.9732   GGGTAATCGAAATCA                 GGGC TGC GCCA                 GCAGCAGGTTCTCGC  41 12
APT56_RS13995 NONE
APT56_RS13990 NONE
APT56_RS13985 NONE
APT56_RS13980 NONE
APT56_RS13975 NONE
APT56_RS13970 NONE
APT56_RS13965 3108982 .. 3108996 -  -4.9  -3.25823   GCGGCGTCACACGAA               GCGGC AACTG ACCGC               GCCGAGCACGCCGTA  49 2
APT56_RS13960 3107646 .. 3107663 -  -4.8  -3.78775   GGCTGCAGTACGAAA             TGGCGA AGATGG CCGCCA              GCGCCCACGCGGCGG  58 253
APT56_RS13940 3104867 .. 3104908 -   -15  -2.52623   GCGTCCCGACAAGAC TCGCGGCGCGCGGGCCGGC TCAGC GCGGGGCCG-GCGCCGCGT CCGCCGACAGGCTGC  73 3
APT56_RS13905 3095587 .. 3095609 -  -9.8  -3.65351   TGACGCTGATGGAAA           CCGGCGCCTA CGA TAAGCGCTGG           GCCTTCGTGCACATG  67 357
APT56_RS13895 3093741 .. 3093785 -  -4.8  -3.14211   ACGTTGCCGGACGAA GCCGCCGCGCGCACGCCGTCCC GCC GGG-CGGTGTTCCTGCG-CAGC TTCCTGGTTGCGCTG  47 303
APT56_RS13885 3092562 .. 3092581 -  -2.7   -3.2302   GGCAACGATAACAGA            GGCCCGG ATATTG CCAGGAC             GATACCCCCGAAGGC  44 59
APT56_RS13880 3091174 .. 3091188 -  -4.2  -4.08706   CCGGTAGTACAGAAA               CAAGGG ATC CCCTTT               GTTTTTGTGGAGGCG  62 84
APT56_RS13875 3090833 .. 3090857 -  -6.9  -2.62616   TGAGTCCGTATATTA          GCCGGCGCTCG TGT CGGTCGCCGGT          CGCGCTACGGCACTC  47 39
APT56_RS13870 NONE
APT56_RS13865 NONE
APT56_RS13860 3088191 .. 3088216 - -10.3  -3.05384   CGCGCGGCCAGGCAA         TGGCAGGCGGC ATCA GCCCCCTGCCG          CCCGACCCGCATCAG  63 37
APT56_RS13855 3086870 .. 3086889 -  -4.9  -3.54424   CGCCAGGGCGTGAAA            GGCCTGA CCGTGT TCCGGCC             GGATCCGGCCATGAC  54 115
APT56_RS13845 3083926 .. 3083946 -  -9.7  -3.64703   GCGTCCGCATCGAAA            CCTCGGC GCAGGCG GCCGAGG            CGCTGCGGCCCGTGG  67 453
APT56_RS13830 3080979 .. 3081006 -  -4.8  -4.35524   GCGGGAAATGGAAAA        GATCGCGCGCGAA GCG TCCGC-CTCGACC        GCCGCCGCCATCCGC  69 166
APT56_RS13795 3075021 .. 3075039 -  -5.3  -3.04144   TGGCTACCGCGAACA            GGGCG-AT GTCA ATACGCCC             TTCGAACTGGCCGTG  46 245
APT56_RS13775 NONE
APT56_RS13770 3069852 .. 3069876 -  -2.7  -4.40298   ATGTAAAGTAAGAAA          TGGGCCGGT TTTCAGG ACCGGCCTG          CTTCTTCCCGATTGT  65 116
APT56_RS13760 3066388 .. 3066418 -  -6.8  -2.53263   GCGACGGGGAAGGGA      CGCCGGCATCGCA TGGCCG CGCG-TCCCGGCG       CGGTAGCCTCAGGCG  47 34
APT56_RS13755 NONE
APT56_RS13750 NONE
APT56_RS13745 3065040 .. 3065056 -  -5.8  -3.05844   GTCGGCATTGGAACA             GCCAGCG CCAT CGC-GGC              ACCGGGCGCGCGGGG  49 112
APT56_RS13740 3063483 .. 3063504 -  -8.7  -3.17075   CGGCCCCCAAGCCAA           TGCCCAAGGC GCA GCC-CGGGCA           GGCGAACCCGCAGCC  56 305
APT56_RS13710 NONE
APT56_RS13705 NONE
APT56_RS13700 3056662 .. 3056674 -  -4.7  -2.91264   GGCGGGAGCGATACA                GGCTC ATT GCGCC                TCGCTTTCGCGCCGC  45 16
APT56_RS13695 3055603 .. 3055624 -  -5.7  -3.06183   CTGATCCCTACGCAA           GTGCCATGC CCGG GCCTGGCGC            CCCGTCGCGCCAGGG  49 89
APT56_RS13690 3053955 .. 3053965 -  -2.4  -3.20723   CGCGGAGGAAGGCAA                 GGCC ATT GGCG                 GTTCCTACTGGAGCA  44 30
APT56_RS13685 NONE
APT56_RS13680 NONE
APT56_RS13675 NONE
APT56_RS13670 NONE
APT56_RS13665 NONE
APT56_RS13660 NONE
APT56_RS13655 3036037 .. 3036048 -  -7.2  -2.78384   GGGGCGGCGATTACA                GCGC GCCG GCGC                 AGTTGGTGGGCGACT  49 512
APT56_RS13625 3029589 .. 3029613 - -11.3  -3.02511   CGCAGGCCGCCAACA          TCGACGCCCGC ATC GCCGGCGGCGA          ACTGGGGCTGTCCTA  62 460
APT56_RS13610 3025922 .. 3025951 - -13.5   -4.2803   GACCTGAACGTAAAA       GAGCCAGCCACCC TCGC GGGCGGCCGGCTG        ACGAGACGGAAGGCG  95 58
APT56_RS13605 3025027 .. 3025083 -  -4.8  -3.13403   CGGCGCCGATCAACA GGCGGCGCG-GCCAGGGGGAAGGGC GCGTCATG GCTCAGATCCCCGGCACGCGCTGCC ACGGCAGCAGGCGGC  47 3
        cysW 3023793 .. 3023819 -  -9.3  -3.78775   TGGTGCACTACGAAA         GCGCGATCGCC TCGCT GTCGGTCGCGC         TGGGATGCGACGCCT  67 436
APT56_RS13590 3020518 .. 3020560 -   -10  -3.33696   GCGGCGCCCAACGAA GGATTGGTTGTTTAGTTGTG CGT CATGACCAAATAACCAATCC TGGCGTTCAACCGCC  67 32
APT56_RS13585 3018885 .. 3018909 -  -6.9  -3.40597   GCGGTCAGGCAAACA          GCGGCGGGCGG GAT CAGGCGGCCGC          GCGCGCGGGGGCGGC  55 14
APT56_RS13580 3017707 .. 3017748 -  -5.7  -3.26031   GTGATGGGAAAGAGA GGCCATGGCGC-GGTCCCG TCAGCG CGCGGCCTGCGCCG-GGCC CGATACCGGCTTGCC  51 2
APT56_RS13575 NONE
APT56_RS13570 NONE
APT56_RS13565 3015089 .. 3015117 -  -2.2  -3.45118   TCACTCCAGAAGGAA       TGGCGGCC-TCGC TCGG GCGGCGGCCGTCG        GCAAGTGAGGAAACA  47 81
APT56_RS13560 3013599 .. 3013614 -  -4.7  -3.18264   GCGCGCATTCATCAA              TAGCC CTGTCC GGCTA               TCTGCTATGAGCGGG  49 103
APT56_RS13555 3012745 .. 3012789 - -13.5  -2.74038   AGAGCAGATACATCA TGGCGCGACACCCGCCCGCG GACAGG CGCGG-CGGGCGCGGCGCGA GCCGGATGCGCGGAC  68 50
APT56_RS13550 NONE
APT56_RS13530 3008487 .. 3008529 -   -14  -4.07568   CCCGGCCCTCCAAAA GACCGCGGACCGTGGAGCGC CTG GCGCCGCACGGTCCGCTTTT TTTGGAATGCCGCGA  93 41
APT56_RS13515 3004568 .. 3004586 - -17.4   -4.4078   CTCTCCGAATGAAAA             CGCCCCCG GAA CGGGGGCG             AACAGGTGTGGCGCG 100 49
APT56_RS13510 3002924 .. 3002944 - -19.7  -5.10933   CGATCCAAAAGAAAA            CGGGCGGCC CAT GGCCGCCCG            TTCATGGCTTCGCTG 100 49
APT56_RS13505 3001780 .. 3001814 - -21.5  -3.53091   ACCGTGGCGCCCAAA     GCAGGACGCCCTCCG GTGGG CGGAGGGCGTCCTGG     CTGCGCGGAACCGCA 100 84
APT56_RS13500 3000854 .. 3000870 - -15.1  -3.18582   CAGGCGACGGACCAA              GGCGGCG GGT CGCCGCC              CGGGAGGATTCCGTG  83 75
APT56_RS13495 2999403 .. 2999439 -   -23  -4.17089   CGGAAATCGGGAAAA   CGCGGCGCGGCCCGGCG CCAT CGCCGGGCCGCGC-GAG    AGGCGCTCAGCGCAC 100 32
APT56_RS13490 NONE
APT56_RS13485 2996944 .. 2996956 -  -4.8  -3.25823   TGCTGCTCATATCAA                CGCT CCACC AGCG                CGATGCGCTTGTTGT  49 9
APT56_RS13480 2995795 .. 2995831 - -17.1  -2.60813   TACTCCCGTAAATAT    CGCGTTGCGGGCCCGCC CGT GGCGGGCCCGCGGCAAG    GTTCTATCGTGCGTG  81 29
APT56_RS13475 2994974 .. 2994991 - -11.3  -5.40072   GCGGTCCGAAAAAAA             CGCCTTC CGGG GAAGGCG              CTTTCACGGTGGGCG 100 68
APT56_RS13470 2992111 .. 2992139 -  -9.6  -3.53012   CGCTGGTGCTGGAAA       CGCCGGCGCTGCCG GAT CGG-AACGCCG-CG       CCGACCGGCCCGGCC  65 363
APT56_RS13455 NONE
APT56_RS13450 NONE
APT56_RS13445 NONE
APT56_RS13440 2986554 .. 2986584 - -11.9  -3.14132   GGGCGCGCTGATGAA      GTTCCTGT-CGGCG ATGG CGCCGAACTGGAAC       ATCAGCCTGTTCCAC  64 190
APT56_RS13425 2980617 .. 2980644 - -20.6  -5.27335   CGGCGCAAAGAAAAA        GCCGGCGGCTCC TTGC GGAACCGCCGGC         TTTTTTTTGCGCCAT 100 70
APT56_RS13405 NONE
APT56_RS13400 NONE
APT56_RS13395 NONE
APT56_RS13390 NONE
APT56_RS13385 NONE
APT56_RS13380 2970898 .. 2970951 -  -3.9  -2.62184   CGCGGCGTGACACGA CGGCATCCATG-G-CAGGGGCTTCCC GGGCT GGGAAGCGC-TGTCGCATGGTCGCCT GTCATGGCGGGTTGC  41 101
APT56_RS13375 2969650 .. 2969665 -  -3.9  -3.53224   CATGCCCGCTTGAAA              CCCGC GGGCCG GCAGG               CTAGCCCAGGCCGGC  51 26
APT56_RS13370 NONE
APT56_RS13365 2966025 .. 2966060 -  -3.8  -3.01712   CGGCGGCGGCCAACA    GCATACAGGCGCC-CAG CAG CAGTGGCGCGCGCAGGC    GTGGGCTGTGGGAGG  44 83
APT56_RS13360 NONE
APT56_RS13355 NONE
        fecE 2962869 .. 2962895 - -13.6  -2.57132   TCCGGCGGCCAGAAG         CAGCGCGTGGCC ATC GCCCGCGCGCTG         GCGATGGAACCCGAC  66 353
APT56_RS13325 2958444 .. 2958469 -  -8.9  -3.28712   TGCGCTTGTCGACAA         GGACGGCGCACG GAG CG-GCGCTGCCC         TGGGCGCAAGCGTTG  59 108
APT56_RS13300 NONE
APT56_RS13295 NONE
APT56_RS13280 NONE
APT56_RS13275 2948905 .. 2948917 -  -7.7  -2.59431   GGGGGCGATAATTTA                TCACG CGG CGTGA                GCGCCGGTGGCAAGC  50 72
APT56_RS13270 NONE
APT56_RS13265 NONE
APT56_RS13260 2945498 .. 2945510 -  -4.7  -4.08216   TCAGTGTGGCCAAAA                GGCGC GTG GCGCG                GTATACGCCCGATTA  64 104
APT56_RS13255 2944902 .. 2944932 - -11.2  -3.73107   CGACGAAACGCGAAA       CTGCCCCCGAAT GTCTGCA ATTCGGCGGCAG       TCAGAGGCCAGCTTC  77 50
APT56_RS13250 NONE
APT56_RS13245 2942105 .. 2942125 -  -5.5  -4.70879   TCCAAACCGGAAAAA            TAATGGGAA TGG TTCCTATTA            TAACTATTTGGGACT  79 232
APT56_RS13240 NONE
APT56_RS13235 NONE
APT56_RS13230 NONE
APT56_RS13225 NONE
APT56_RS13220 2935991 .. 2936022 -  -6.4  -3.06183   GTGATCCGTATTGAA      CCGGGAGGCCAGCGC AGG GC-CTGGCAGCCGGG      CCTGGGATTCATTCC  48 309
APT56_RS13125 2915529 .. 2915539 -  -8.2  -3.29511   TCGAGGCGGCCAGAA                 GGGC CAC GCCC                 GCCGAGCTGGAAGCC  59 496
APT56_RS13115 2914122 .. 2914156 -  -2.3  -3.67792   TTATATTCAGTTAAA    TGACAGT-TTTTGGAA TGAT TTCCAAAATAATGTCG     ACAAAATAAATGCCG  50 96
APT56_RS13110 2912379 .. 2912421 - -15.5  -4.63218   GGCGGGGCAAGAAAA GCGACGGGGCAGG-CCGGCG GGAT CGCCGGGCCTGCCCCGTTTT GCGTGCCGCGTCGTA 100 41
APT56_RS13100 NONE
APT56_RS13095 2910096 .. 2910112 - -13.7  -3.03771   GGACAGCGCCGAATA              CCGCGAG CTG CTCGCGG              CCAACGGCTTCGAGG  69 135
APT56_RS13085 2907846 .. 2907864 -  -5.2   -2.6155   CGTCGCAATATGAAT             TCGTGCCG TCG CTGCACAA             GGCGGTGAACGTGCC  42 295
APT56_RS13070 2905279 .. 2905317 - -12.4  -2.70932   CGTGTGCTTGAATTA   TTTTTCCGCGCGCCGA TGCGTGG CCGGCGCGCGGGAACA   ACCGTGGGGCAGGGC  65 44
APT56_RS13065 2904188 .. 2904216 - -13.2  -5.75342   CCTCGCCAAAAAAAA       CGCCGGCCCGGAA TGAC TTCCA-GCCGGCG        TTCGTGACGTTGCGG 100 76
APT56_RS13055 NONE
APT56_RS13050 2901070 .. 2901081 -  -5.8  -3.62046   GGAGGTGGTGAAGAA                GTCG GGGG CGAC                 GGTGGAGTGATGGCT  57 108
APT56_RS13030 2896663 .. 2896689 - -10.1  -3.14344   TATGCGCTGGAGTAA        GGCGGCGCGGTG ACTC CAC-GCGCCGGC         CATCCGCTTCAATCG  63 34
APT56_RS13020 2894224 .. 2894261 -  -6.1  -3.02144   CCATCGTGCTGAACA   CCGCC-GCCGGCGTGCAG CAA CTGGACGCGCGCTGGCTG   CAACTGGCGCAGAGC  48 313
APT56_RS12990 2888518 .. 2888528 -  -8.2  -3.18681   CTCCAAGGCCACCAA                 CGGC CTG GCCG                 TGCCGATTCCCGACC  56 432
APT56_RS12970 2884284 .. 2884315 - -14.4  -4.07568   GGCGGCTTCTCAAAA      GCGCGCAGGCGAGCC GTC GGCCCGCCTG-GCGG      CAGCGCGTGCGTGAA  93 44
APT56_RS12965 2881982 .. 2882011 - -14.9  -3.63515   GTTGATCGTCAAGAA       CTGGCTGGACGCG GCGC CGCGTCCGGCCTG        GCTGCGGCGGCTGGG  83 95
APT56_RS12885 2862910 .. 2862950 -  -9.6  -3.85698   CGCGCGGCTGATAAA CGGGGCG-GCCGTCCGCGCT TCA AG-GCGCCCGGCGCGGCCCG GCGGGCACGATCTTC  73 4
APT56_RS12870 NONE
APT56_RS12865 2859352 .. 2859363 -  -5.8  -3.61764   TCAGCAATCCCGAAA                TGCG CCAG CGCA                 GCATCCAGGTCGTGA  57 179
APT56_RS12855 NONE
APT56_RS12850 2855921 .. 2855960 -  -3.6  -4.20368   TGATTCTAATAGAAA TGGGGCCAG-A-GTAGGA CGGAAT CCCTACGCGCTGGCCCCG  CGGGCGCAACGGAGC  64 54
APT56_RS12845 NONE
APT56_RS12840 2853825 .. 2853847 - -16.2  -3.53811   TTGATGCCGGTCAAA           CGGCCCCGGC CGG GCCGGGGCGG           GCGCAATGCGGCCCT  90 39
APT56_RS12835 2851704 .. 2851717 -  -4.5  -5.00616   CGCCCGGGGAAAAAA               CG-CGG TGA CCGGCG               ATGTCAGGCCGGCGC  82 29
APT56_RS12830 NONE
APT56_RS12825 NONE
APT56_RS12815 NONE
APT56_RS12810 2847288 .. 2847304 -  -2.2  -3.23853   TCTGTTCAAGCAACA              CGGGAT CGCTC ATGCCG              GCACCTCTTCACGCA  44 18
APT56_RS12805 2845871 .. 2845896 - -18.3  -5.71712   GGGCAGACAAAAAAA         GGGGCAGAGCC GGCG GGCTCCGCCCC          TGGCCAATGGTGGCC 100 41
APT56_RS12800 2844320 .. 2844342 -  -8.3  -3.35679   GCGGGTCAGCGACAA           TGGCGCCGG CATTC CCGACGCCT           TGCGCGCCGGCCTGT  59 254
APT56_RS12785 NONE
APT56_RS12780 2840655 .. 2840665 -  -3.2  -5.40072   GTGGTGGGAAAAAAA                 GTGA AAA CCAC                 CTAGCTGCCGCCGAA  93 26
APT56_RS12775 2840247 .. 2840283 -   -18  -3.53012   GGGCTCCTCGGGAAA   GCGGGC-CCGCGCGCGGC GCG GCCGGG-GCGGCGCCCGC   GGGGCGGTTGGCGGG  93 46
APT56_RS12770 2839717 .. 2839739 -  -7.6  -3.23975   ATCCTCGAAAAATGA           CGCCGGCC GCGATCA GGCCTGCG           GGGTGAAGCTCATGG  57 15
APT56_RS12765 2838638 .. 2838654 -  -6.5  -3.13722   AAAGATACCATCCAA              GGCCG CGATTTT CGGCC              GTTTGGATACCAACC  51 366
APT56_RS12760 2835527 .. 2835576 - -12.2  -2.75528   AGGCCGAAGAGATCA TGGGTGCGCAGGGCGGATATCCGG ATGG CCGGAT-TCCGCC-TGCCCCCGCA CTGTAGCGCAATGCG  65 103
APT56_RS12755 2834713 .. 2834762 -  -8.5   -3.9644   GCGCGAAGACAACAA GACCCT-GGCGGCCACGCTGCGCG AGG CTCACAACGTGACCGACGAGCATC GCGACATCGCCAGCT  72 217
APT56_RS12740 2832524 .. 2832579 -  -2.8  -2.78715   AAGCGCCGTAGCATA CTCCTTCCGCCCGGCCGGCTCCGCGC CGCC ACGCGCAGCGCGCAGGACGGCGGCCG CGCCGGTCTTGCCCG  41 112
APT56_RS12735 2830874 .. 2830895 -  -5.7  -3.05844   TGGCCGACCTGAAGA           TCGCCACCA CGTT CGGCGGCGG            GCGGCTGGCGGCCGA  48 418
APT56_RS12725 2828850 .. 2828871 - -14.4  -3.66654   GACCGCAATGCCAAA           GGCGCCGG CTTTGT CCGGCGCC            TTTTTTCGCTGGCAT  84 40
APT56_RS12710 NONE
APT56_RS12705 NONE
APT56_RS12700 2823409 .. 2823429 - -16.1  -5.55769   CCCGACAAGAAAAAA            GCCGGCCCC CCA GGGACCGGC            CTTTCCCGGGCAGGG 100 52
APT56_RS12690 2821147 .. 2821159 -  -4.7  -3.48395   ATCTCCCGTAGAGAA                TGGGC CGC GCCCC                GACGCGACCGGCTTG  53 356
APT56_RS12685 NONE
APT56_RS12680 NONE
APT56_RS12675 2818291 .. 2818311 -  -5.3  -3.91144   GCCAGAGTTTAGAAA            CTGGCGAGC ATG GCTGGCAAG            GATTATGTGGCGCCT  60 67
APT56_RS12670 2817039 .. 2817052 -  -3.1  -3.38281   GGACGGAAAATGGAA               TAGGA TCGG TCCCA                GACTTGGTTGTCGTG  47 53
APT56_RS12665 2815244 .. 2815299 -  -8.1  -3.05997   GGCCGATAAATCAGA CGGCTTCAGC-GCGGCGTGCTGCTCGGC ATC GGCG-GCATCGCGCCGCTGCGGG-GCCG CAAGGGTCGGTCCGC  55 88
APT56_RS12660 2809695 .. 2809724 -  -6.4  -3.85698   GGCCGTGTTCAGAAA       GGGGCGCGCT CAGAACTGAT AACGCACCCC        GATCTGGCCGTTGTA  64 5
APT56_RS12605 NONE
APT56_RS12600 2794501 .. 2794513 -  -7.7  -2.78712   TCCGGAATGTAACCA                GCAAG CGT CTTGC                CGCGCGCCGGCGGGC  52 57
APT56_RS12595 2793912 .. 2793929 - -14.1   -5.3104   CGAGGAAAAAGAAAA             GGCCGCC TCGC GGCGGCC              TGGGTGCGGGGCGTA 100 59
APT56_RS12590 2791840 .. 2791850 -  -4.6  -2.56596   GTCCGCAGGAATCCA                 GCCC GGC GGAC                 GACGTGGCCGTGCTC  43 47
APT56_RS12585 2790974 .. 2790991 -  -6.9  -3.53012   CGGGGCTGCTGGAAA             CGGAGCC CTCG GGCTTCG              GCGAACTGACGGCGG  55 244
APT56_RS12575 2787899 .. 2787920 - -14.4   -3.8822   CATACGAAACGTAAA           CGGCCGCG ATCAGG CGCGGCCG            TGATGTGATGGACGA  88 54
APT56_RS12570 2785750 .. 2785769 -  -7.1  -2.78816   GCACGCGCGAGGAGA            TCGCGCG CAGCGC CGCGCAA             CTGGCCGGCCTGCCC  49 348
APT56_RS12550 2782078 .. 2782133 - -10.9  -3.28712   CGGCCGCGGCGACAA GGCCG-GCGCCCGCGCCGCCTGGGAG TCGGG CCTGAAGGCTGCGCAGGCGCGCGGCG ACAAACAGGTCGAAA  66 121
APT56_RS12540 NONE
APT56_RS12535 2778660 .. 2778679 -  -5.6  -4.39002   AAACCGGGGAGAAAA            CCG-GGCGC TGG GGGCCGCGG            CGGCAGGGAAGGGAG  73 118
APT56_RS12530 NONE
APT56_RS12525 2776766 .. 2776781 -  -4.6  -2.51547   CGCCGAGACCAACAC              CGCCAT CGTC AAGGCG               CACACCGTGCGCCGC  42 173
APT56_RS12515 2775264 .. 2775287 -  -5.9  -2.79831   GGAAGGTCCATGATA          GCGGC-GCCC CGGGC GGGCGGCCGA          ATACCCGGGGGCGCG  47 65
APT56_RS12510 NONE
APT56_RS12505 NONE
APT56_RS12500 NONE
APT56_RS12495 2772890 .. 2772917 - -10.4   -4.3898   ATTACCTCCAGAAAA        CCCGGCCGCGCC CGCG GGCGCGACCGTC         CGACTCAAACCCGTG  88 46
APT56_RS12490 2771947 .. 2771964 - -14.1  -4.43815   AGGAAGACAGGAAAA             CCGCCCC GACA GGGGCGG              TTTCCATTTTGGGCC 100 114
APT56_RS12480 2768004 .. 2768026 - -11.9  -3.01712   CGCGGCTGGCCAATA           CGCCGGCGC TGTAC GCGCGGGCG           GCCGAAGTGGGCGCG  62 440
APT56_RS12425 2758019 .. 2758051 -  -9.2  -2.52464   TGGCGCGGCAATTGA     CGCGC-CATGACGCGC TCG ACGC-CCATGCGCGCG     ATGAGTTGGGCATTT  51 387
APT56_RS12385 2751793 .. 2751803 -  -8.2  -3.06361   GATCAACGATACACA                 CGGC CAT GCCG                 CCGGCGACGCGGTGC  55 395
APT56_RS12365 NONE
APT56_RS12360 2747574 .. 2747609 -  -3.9  -2.70932   CGCCCCTGGCAAGGA    CGCG-GGCCAGGTC CTTCAGGCC GCCTTGGCCTCGCG    CTCGATCATTTCGCG  42 5
APT56_RS12355 NONE
APT56_RS12350 2745976 .. 2745988 -  -2.6  -3.53012   CCTCTCCCTGTCAAA                CACC GGACG GGCG                GGAACTGATGATCGA  47 79
APT56_RS12345 2743346 .. 2743370 -  -8.5  -3.64703   CCGCGTTGACGCAAA          CCCCCGCAT TCGAAAG AGGCGGGGG          TTTTTTCTTGGGGCG  65 99
APT56_RS12335 2739909 .. 2739929 - -19.7  -3.48276   TTTGCCGCCAGACAA            GGGCGCGCC GGT GGCGCGCCC            TTGGCGTTTTCAGCC 100 35
APT56_RS12235 NONE
APT56_RS12230 2718208 .. 2718222 -  -4.2  -4.19238   TCGCCAAGCCGAAAA               CCGGAT TGT ATGCGG               TCGGCGACGGTCTGG  62 60
APT56_RS12225 2717418 .. 2717439 -  -5.7  -3.17075   GTTGTTGCAAGGTAA           GGGGTTCGC GGGG GCGGAGCCC            CCGGGGGATGGCCGG  49 56
APT56_RS12220 NONE
APT56_RS12215 2716308 .. 2716325 -  -2.7   -2.5409   ATAACCGGTAAGGTA             TTTCATG GCGT CAGGAAA              GCGGGGAGGGCAGCA  38 18
APT56_RS12210 2715758 .. 2715777 -   -15  -4.18018   GCGCCCCATGCAAAA            GCCGCTCC CTGG GGAGCGGC             TTTTTTTTGTCCGTC  95 61
APT56_RS12185 2710819 .. 2710848 -  -8.5  -3.55071   CCAGATGGTGGGAAA       CCGGGC-GCGGC TTCTGCG GCCGCTGTCCGG       GGATGCCGGGGACCC  62 48
APT56_RS12180 NONE
APT56_RS12175 NONE
APT56_RS12170 2707306 .. 2707324 -   -16  -2.77999   GAGCCAGGAAGAGTA             CGCCCGCA TCC TGCGGGCG             GCCTGCACGGGGCTG  74 127
APT56_RS12160 2706068 .. 2706092 -  -2.9  -3.63922   ATTGGCGCCAAAACA         GGCACGGCGGA AAATA TCCG--GTGCC         ATATCAAGCCGTGGT  51 29
APT56_RS12155 NONE
APT56_RS12150 NONE
APT56_RS12145 NONE
APT56_RS12140 2702363 .. 2702379 -  -2.1  -3.97947   GGTACGCATCAGAAA              TCCGTGG GGA CGACGGG              GCGGGGGTCGACCAC  57 2
APT56_RS12135 NONE
APT56_RS12130 2700866 .. 2700877 -  -3.6  -3.87994   ATCGACCTGCAGAAA                GCCA GCAT CGGC                 TTCCAGACGGCCGTC  58 368
APT56_RS12120 NONE
        fliG NONE
APT56_RS12110 NONE
APT56_RS12105 NONE
APT56_RS12100 NONE
APT56_RS12095 2693480 .. 2693495 -  -2.4  -4.62069   CTTGGAGGCGAAAAA              CAGGGC GAAA GCCGCG               TATCTCAAGCTATTG  70 84
APT56_RS12090 NONE
        fliM NONE
APT56_RS12080 NONE
APT56_RS12075 NONE
        fliP NONE
APT56_RS12065 2689767 .. 2689780 -  -2.3  -2.88268   GGTGAAGGAAAACAT               GGGGA GCCG TCCCG                GCGGCGGATGCCGCT  40 39
APT56_RS12060 2688903 .. 2688916 -  -9.5  -5.28481   CATCGAATGAAAAAA               CGGCC CTCG GGCCG                TTTTTTCATTGTGCC 100 87
APT56_RS11975 NONE
APT56_RS11970 NONE
APT56_RS11965 2668016 .. 2668044 -   -19  -3.03124   CGGTATCGGCCAAGA        CAAACAGCCCGC TTCAT GCGGGCTGTTTG        TCTTTGAAGATGAAG  93 49
        fliA 2647664 .. 2647681 -  -9.8  -3.37685   AAAAGGGTGGAAAGA             GCCCGG GTTTCA CCGGGC              CGGGCGTCCTGCCTA  64 89
APT56_RS11875 2645748 .. 2645761 -  -3.1   -4.2074   CTCCCAAGAGAGAAA               GGCTT CTTC AAACC                GGGCAGCTATGCCGC  64 203
APT56_RS11870 2643734 .. 2643763 -  -6.4  -5.00616   GCGCGTCTCAAAAAA       GCGAGAAGGTGGC AAAAA GCCTCCTTC-CAC       GATCGCTTGGAAGTC  91 323
APT56_RS11865 NONE
APT56_RS11860 2642450 .. 2642483 -  -7.3  -3.02461   GAAGCGGGCCGAAGA     GGGCTGGGCGCGGCAA TCG TTGCCGCGCGC-GCTG     GCGCGGTTTACGCCT  54 33
APT56_RS11830 NONE
APT56_RS11825 NONE
APT56_RS11820 2630355 .. 2630402 - -22.8  -2.69151   CGGGCCCAGAGACGA CTGTGGGTTTGCCCCCGGCCCC CGGA AGGGCGCGGGACAAACCCACAG GGGTGCCACGGCGGG 100 56
APT56_RS11815 2628109 .. 2628129 - -11.1  -5.60993   CCTGCGACAAAAAAA            GGCCCGC TGATCAG GCGGGCC            GGGGCGGTGCGCGGA 100 45
APT56_RS11805 2626198 .. 2626247 -  -2.8  -2.76696   CCGGGCTGTAACAAC TGGTGTTTGGCG-CTGG-CGC-GCA ACA TGCCGCGGCCTGTCGCCATGCAGCA ATGTTGCATGCGGCC  40 41
APT56_RS11800 2625820 .. 2625845 - -20.5  -5.20216   GACAGCATGAAAAAA         GCGGGCCGATC GAAA GATCGGCCCGC          TTTGCGTGGTGCGCG 100 50
APT56_RS11780 2618449 .. 2618479 -  -4.1   -4.1822   CGCGAGGGCAAGAAA      CG-CCAGATTCGC CGCATGT GCGAA-CTGGTCG      GGCTGAAGGTGGTGG  63 216
APT56_RS11770 2616851 .. 2616877 -  -5.6  -2.71144   CAGCGCGGTCAACCA         GGCCACGCGCCA GAT CGGCGCGGTGCT         GGGGGTGGCGTTGAC  43 253
APT56_RS11715 2604594 .. 2604644 - -12.3  -3.14931   GCGATGGGCCAGTAA GGCCCGCTGC-GCGGGCGCGGCCG GCCA CGGCCGGGCCCGATGCGACGCCCC GTGCCGCTCCCGCCC  69 79
APT56_RS11690 2597376 .. 2597402 -  -9.2  -2.79589   ATGACAGCAATATGA         GGCGCGCGGCTC ACG GCGCGGCGCGCG         CGATGCCGCCCTCGG  58 9
APT56_RS11685 NONE
APT56_RS11680 NONE
APT56_RS11675 NONE
APT56_RS11670 NONE
APT56_RS11665 NONE
APT56_RS11660 NONE
APT56_RS11655 NONE
APT56_RS11650 2592038 .. 2592079 - -22.4  -2.91144   GCAGGGCGGAAACGA TGCAGACTCCGCGGCGTC GCCGAG GACGCCGCAGAGTCTGCG  ACTCAGTCTGACAAA 100 83
APT56_RS11645 NONE
APT56_RS11640 2588720 .. 2588732 - -10.5  -2.90194   AGGCGTGCAACCACA                CCGGC TAC GCCGG                CCGTTCCGGCATTCA  57 290
APT56_RS11625 2583466 .. 2583479 -  -8.1  -3.21593   CACCGGGGGAGAAGA               GCGTC ATGC GACGC                ACGCGTCCGTGGCCG  57 60
APT56_RS11620 NONE
APT56_RS11615 NONE
APT56_RS11610 2581865 .. 2581879 -  -2.7  -3.55444   TTCGGACGGGGGAAA               GCGAC GAAGA GGCGC               TGTGATCGGCGCTTG  47 115
APT56_RS11590 2576184 .. 2576205 - -18.7  -5.18371   GGCCACAAAAGAAAA           CGGCCCCGG AAAT CCGGGGCCG            CTTGTTTTCGAGCGA 100 54
APT56_RS11585 2573876 .. 2573892 - -11.5  -4.74103   GCCCCAAGGCAAAAA              CGCCCCC TTG GGGGGCA              GCGACCGCGCAGCGG 100 153
APT56_RS11545 2563762 .. 2563776 - -12.8   -5.4505   TGGCGCAATAAAAAA               CCGGCC GTT GGCCGG               TTTTTTATTGCGTGT 100 44
APT56_RS11530 2559942 .. 2559970 - -23.9  -4.59773   GCCGATGTGGAAAAA        CGCCCCGGCAGGA GAT TCCCGCCGGGGCG        TTTCGCATCAGGGCG 100 46
APT56_RS11515 NONE
APT56_RS11510 2554823 .. 2554851 -  -8.9  -4.86621   ATCCTCAAGGAAAAA        GGGCTGACG CTGGAAGATTT CGTCAGCCC        GCAGGGCAAGCTCAA 100 197
APT56_RS11495 2551421 .. 2551444 -  -3.8  -4.72272   TCGGGTCAGGAAAAA          TGCGGTGGCGC CGG ACGG-ACCGCA          TGAGCCGCCGCGCGG  78 63
        fabG 2550563 .. 2550594 -  -6.6  -2.85351   CTGGGCCAGATGATA     CCGTGC-CCG-GCGG GCGCA CCGCGCGGCGC-CGG     CATCACCCCTTGACC  49 28
APT56_RS11485 2549608 .. 2549626 -    -3  -3.35278   GCAACTATACAGGAA             TTTGCGCG CGC CGTGCAAG             CTGGCGAACAAGATT  47 47
APT56_RS11480 2549447 .. 2549466 - -13.6  -5.27335   GCGCCCAAACAAAAA            CAGCGCCT TTTA AGGCGCTG             TCCTGGACTTGCCCA 100 61
APT56_RS11440 NONE
APT56_RS11435 2542404 .. 2542424 - -12.5  -2.56596   GCGCCCACGAACCCA            GCCCGCCGC GCA GCAGCAGGC            CCGACGCGCCAACCA  62 47
APT56_RS11415 2538721 .. 2538751 -  -6.1  -3.01712   GCCGGCGCTGCAACA      GCGCAGCG-TGGCCG GCC CGGGCAGCGCCGC-C      GTGCGCGAGACGCTG  48 196
APT56_RS11400 2534961 .. 2535003 -  -9.9  -3.14132   CCTGGTGCCCACGAA GACCGCCAGCCACGGTT-GCC CGG GCCGAACCGCGGCC-ACGGTC GGGGCCTCTGCCCGC  60 50
APT56_RS11395 2534340 .. 2534356 -  -3.5  -3.06509   GTTCAAATAACGATA              CGGTCCG CGG CGGCGCG              GCGTCAAGCAAGACC  43 184
APT56_RS11390 2533686 .. 2533705 -  -9.2  -6.25741   AAAGAACAAAAAAAA            CGCGGCAT GGAC AGGCCGCG             GCATGCCTCATGTCT 100 33
APT56_RS11385 2532389 .. 2532435 -  -7.9  -3.53012   GGGCGGGTTGCCAAA CGGCGC-CCGGCG-TCGCGCC GGTTCAT GGCGCTAGCGCCGGCGTCCCG GCCGGAAAGCGTGGC  60 9
APT56_RS11375 2529923 .. 2529935 -  -4.7  -2.87463   AAGGCGGGCCAGACA                GGCGC GGC GCGCG                GGCTGGCTCAGTGCC  45 102
APT56_RS11370 NONE
APT56_RS11365 2527571 .. 2527585 -    -7  -2.70932   GCCGGTCTTCAAGGA               CCTGGC CTC GCCCGG               CATGCTCTATTGCCG  49 493
APT56_RS11345 NONE
APT56_RS11335 2517572 .. 2517587 -  -3.3  -2.71364   CGATCTCTGCAATGA              TGTAG AGATCG CTACA               AAGACTGCTTCGTTC  40 85
APT56_RS11330 2516542 .. 2516552 -  -2.4  -2.87132   GGTTTCCGGTAGATA                 GCCC GCC GCGC                 CGATCGGTCGCGCTA  40 38
APT56_RS11325 2514588 .. 2514620 -    -4   -2.7728   TCGAAAGCGGAAGCA     TGGGGCGGGTG-GCG TATG CGCGCATCGGGCCCA      ACGAGGATCTGGTGC  40 413
APT56_RS11290 NONE
APT56_RS11285 2505981 .. 2505994 -  -3.7  -4.97383   AGGGAAAAAAAAGAA               TGGGC ACAG GCCCG                AATTGAAGATTCTAT  79 304
APT56_RS11280 2503809 .. 2503830 - -15.9   -5.2189   GCAACCATGAAAAAA           GGGCCTGAC TCGC GTCAGGCCC            TTGCCTTATTTGCCG 100 31
APT56_RS11270 2502339 .. 2502349 -  -6.8  -3.54129   GACATGGCCCTGAAA                 GTGG TGG CCAC                 GCTGTGCGGCGACGA  57 199
APT56_RS11260 NONE
APT56_RS11255 2500235 .. 2500261 -  -6.5  -3.04792   GCATCACGGTGAACA        CCGTGGCG-CCG GGGC CGATCGCCACCG         AGCTGTTCGACCAGT  48 262
APT56_RS11240 NONE
APT56_RS11235 NONE
APT56_RS11230 2494915 .. 2494948 -  -9.6  -3.01712   CCGCGCCGCTGAACA    GCAGGC-TGGC-GCCG CAGG CGGCGGCCACGGCTGC     CAGGGGTTTGGCCAG  59 248
APT56_RS11225 2493591 .. 2493626 -  -5.9  -3.03771   GGATATGCTGGAAGA    GGCGATCGCCCGGCC GGCATG AGCCGCGCGCCAGCC     CGCCACGCTGTCGCG  48 124
APT56_RS11195 NONE
APT56_RS11190 NONE
APT56_RS11185 2485965 .. 2486016 - -16.4  -2.52896   TGATGCGCGAACTGA TCCTGGCGCTGAACCAGCCGGCGG CGCG CCACGGGCCGGTGCAGCGCCTGAG CGCCGAGCTGCTGCT  73 498
APT56_RS11175 2483248 .. 2483279 -    -3  -3.40371   TACTCCAGGAATGAA      GGGTTAAGGGGT GTGGGGCT ACACCTTAACCG       ATCAATCCCGGCGGC  47 94
APT56_RS11170 2481756 .. 2481769 -  -3.7  -3.31144   GCTGTACCCGCAGAA               CCGCC AGGT GTCGG                CGCGGGTGCGGGTGT  47 90
APT56_RS11160 2480034 .. 2480087 -  -2.4  -2.87344   GATTCCTGGCACAGA CG-CAACAGTAGCATCCGCGCCGGCCC GGT GCGTCAG-GCG-ATGCCGCCGTTGGCG CGCAGCACCTGGCCG  40 4
APT56_RS11155 2479121 .. 2479179 - -12.3  -2.83271   CGAGGCCTACAACCA GGCCGGCGGCCACGC-CACCTTCGTGCCC ATG GGGCCCGACGGCGAGAACGGCCAC-AGCC TGTTCACCCACGCGC  64 169
APT56_RS11145 NONE
APT56_RS11140 2476178 .. 2476214 - -11.3  -3.65351   TGATCGGGACGGAAA    GGGGGCGGGCGCCCCGG GGG CCGGCGCGCGCAAGCCC    GCATCCGCCGCGTCC  74 48
APT56_RS11135 2475186 .. 2475218 -  -8.3  -3.31144   TCCGTATCCGGATAA     GTCCCGCGCCGTGC GCATCG GCCCGGCGCGGT-C      TCACTGGCCGGCGGC  60 26
APT56_RS11130 2473586 .. 2473603 - -14.1  -3.71848   TCCTGGCAGGAAGAA             CGGGCGC TTTG GCGCCCG              TCTGCTTTTTTCGGA  86 498
APT56_RS11115 2469864 .. 2469876 -  -9.1  -3.16683   ACTGGACGCGATCAA                GCTGG ACG CCAGC                TTCGTGCGCGGCGTC  56 287
APT56_RS11100 NONE
APT56_RS11095 2463838 .. 2463850 -  -3.3  -3.28712   CGCGGTGGCGCAGAA                CGGCA TCG TGCAG                CGGCCGCTGATCGGC  47 289
APT56_RS11085 NONE
APT56_RS11080 2460797 .. 2460814 -  -6.9  -3.12668   TACGGCCACACCGAA             CTGGGCG CGCG CGCCCAC              CTGGTCGATGGCAAA  50 260
APT56_RS11045 NONE
APT56_RS11040 NONE
APT56_RS11035 NONE
APT56_RS11030 NONE
APT56_RS11025 NONE
APT56_RS11020 NONE
APT56_RS11015 NONE
APT56_RS11010 NONE
APT56_RS11005 2443866 .. 2443892 -  -4.3  -3.14211   ATTGGCCGTGAGGAA        TGCGGACGGTCA ATCC TG-CCGGCCGCG         GCCGCCACTGGCGCG  45 8
APT56_RS10995 2442033 .. 2442062 - -20.1  -6.24157   ATGCACAAAAAAAAA       GGCCGCGTTTCCC CGAC AGGAAACGCGGCC        GCGTTCGCCAGGACC 100 66
APT56_RS10990 2439962 .. 2439995 -  -2.9   -4.1822   GTCCATTGGAACAAA     GACCCGGCATTGAAA GTGC TGCCGTTGCCGGGGC      CACAGGAGTTTCGCA  61 161
APT56_RS10980 NONE
APT56_RS10975 NONE
APT56_RS10970 NONE
APT56_RS10965 NONE
APT56_RS10960 NONE
APT56_RS10955 NONE
APT56_RS10950 2431321 .. 2431355 -  -2.1   -2.8507   GGAGTCAATCAAGGA    GCCC-CGC-GCCACGTT AAT AACGTGCCCGCCCGGAC    CAAGAGGCCAGCGCC  40 4
APT56_RS10945 2430969 .. 2431006 - -10.5  -2.78679   GCGCTTCACGGAAAG   CGGTTCGGCCAAGCGACG GGT CG-CGATGGGTCGAACCG   GTTGATCGTCGAGGA  60 91
APT56_RS10935 NONE
APT56_RS10930 2428509 .. 2428530 -  -3.5  -4.18506   GCACTTCGAAAACAA           CTACGCGAC GCGC GGCGCGCCG            ATCCTGTCCAGGCAT  63 525
APT56_RS10920 2426748 .. 2426769 -  -3.7  -4.11394   ATTTGATGTCGAAAA           CAACGCTTT TTGG AAAGTGTCG            CGTGCGGCTCGGGCG  62 46
APT56_RS10915 NONE
APT56_RS10910 NONE
APT56_RS10905 2423692 .. 2423709 -  -9.1  -4.34402   GTCCTCATAGTAAAA             CGCCGCGC CCC GCGCGG-G             ACTGCTGGAAAACCC  83 203
APT56_RS10900 2422484 .. 2422497 -  -3.8  -3.86897   GCCAGTCCTGACAAA               GCTG CCGCTT CAGC                CGTGCCGCCGCGCGT  58 47
APT56_RS10845 2409587 .. 2409599 -  -3.3  -3.78934   GGTGGTGCAGAACAA                CCTGC ACG GCACG                TTCCTGATGGCGCGC  55 478
APT56_RS10835 NONE
APT56_RS10830 NONE
APT56_RS10825 NONE
APT56_RS10820 2405004 .. 2405035 -  -2.8  -2.65993   AGCAGACGCACAGCA      GCAGCATCACGCCGG TGG CCAGCGAG-TCCAGC      GGACGGCGGGTAGGG  40 63
APT56_RS10815 2404049 .. 2404094 - -13.2  -2.73364   CGGTCACGGCAAGGA CTGGCGC--GCCAGGCGGCGGG TCAG CCCGCGACCCGGCCCGCGCCTG CCATCCCAATACGGT  68 54
APT56_RS10800 NONE
APT56_RS10790 2398451 .. 2398475 -  -6.3  -3.41527   CAAGGTCGACTACAA          GCTGATCCCGA CCG CCGTGTTCAGC          CTGCCCAACATCGGC  55 414
APT56_RS10780 NONE
APT56_RS10770 NONE
APT56_RS10765 2392222 .. 2392244 -  -8.4  -3.28712   GGCGCTGTCGTACAA           CCAGATCAAG GTG CTGGACCTGG           ATCGCCTGCGCCAGT  59 103
APT56_RS10755 NONE
APT56_RS10750 NONE
APT56_RS10745 2387146 .. 2387162 -  -4.4  -3.41701   GTCAGGAAAAAAGGA             TGCGCGG GGCT CCGC-CA              GGCTCAAGGCGCCAG  49 29
APT56_RS10740 2385838 .. 2385886 -  -2.3  -3.14229   AGATGGCGATGAAGA GGGCCAGTCCGCCG-ATGCCG TAAGCCGCG CGGCGCACGGCGG-CGAACCC CGGCGGCGCGCCCTT  42 85
APT56_RS10735 NONE
APT56_RS10730 2384005 .. 2384016 -  -3.6  -2.53263   GCCATGCGCAACTGA                CCAC CGGC GCGG                 GCCTGGCGCTGCTGT  39 412
APT56_RS10720 NONE
APT56_RS10695 2376985 .. 2377004 -    -2  -3.53012   CCGGCCTGGCGCAAA            CCGGCG-GC GCT GCACGCCTA            TGCGGAAGAGCACTA  47 289
APT56_RS10685 2375392 .. 2375403 -  -4.4  -3.22298   GTCACCGATGACGAA                TTCG GCAC CGAA                 GCCGCCATCGCCCGG  47 180
APT56_RS10640 NONE
APT56_RS10635 NONE
APT56_RS10630 NONE
APT56_RS10625 NONE
APT56_RS10620 NONE
APT56_RS10615 NONE
APT56_RS10610 NONE
APT56_RS10605 NONE
APT56_RS10600 NONE
APT56_RS10595 NONE
APT56_RS10590 2358139 .. 2358155 -  -2.2  -3.50491   CAAGACAAAAAATCA              GGCC TGGCGGGGC GGCC              GGATCCACGGCGCCC  47 6
APT56_RS10585 NONE
APT56_RS10580 NONE
APT56_RS10575 NONE
APT56_RS10570 NONE
        fabG 2353885 .. 2353899 -  -4.2  -2.71364   CCATGCCGGTAATGA               CGACGC GTT GCATCA               GCACAGCCCTCCGTT  42 23
APT56_RS10560 NONE
APT56_RS10555 2352122 .. 2352173 - -12.8  -2.70932   GGGGGTGGCCAACCA GGGACGGCCAGCCAGAGGCTGCCCC CTG GAGACTGCCAGCGGCT-GCCGGCCC GTCGTGGACCAATCT  68 51
APT56_RS10550 2351227 .. 2351244 -    -4  -4.57569   CCAGGCGCTGAAAAA             GGGCGC GCTGGG GCGCAC              GGTGGTGCTCAAGCT  72 341
APT56_RS10540 2349735 .. 2349752 -  -9.8  -3.44622   GATCTGCAGAAGTAA             CGCGGC AATCCG GCCGCG              GGGGATTGTGCCGGC  65 67
APT56_RS10530 2347129 .. 2347156 -  -8.2  -3.54129   GAGACCGCGTTGAAA        TGGCCTGGAGCG GACG CGCGCCGGGCCG         CCCGCAGGCGGCCCG  63 77
APT56_RS10520 NONE
        pgaB NONE
APT56_RS10510 NONE
APT56_RS10505 NONE
APT56_RS10495 2336797 .. 2336807 -  -8.2  -3.85698   GCGCGCCGTGACAAA                 CGGC AAG GCCG                 GTTGCAGATGTCATG  69 36
APT56_RS10490 2333871 .. 2333893 -   -22  -3.75153   GCCGCGCAATGCAAA           CGGGGCGCCC GCT GGGCGCCCCG           TTTGCATTGCGCGGC 100 47
APT56_RS10480 NONE
APT56_RS10475 2331451 .. 2331468 - -10.5  -3.40371   GACGCCATCAAGGAA             GGGCCCC GCCT GGGACCC              GATCCGGAGAAGTTC  67 122
APT56_RS10465 NONE
APT56_RS10460 2327881 .. 2327903 -  -2.7  -3.51032   ACTGTCCAAGGAGAA          CG-AGATCAC GCTG GTGTTCTGCG           GCTCGAAGAAGTCGC  47 251
APT56_RS10450 2326068 .. 2326096 - -10.3  -2.71681   GAACCTGCTCAAGCA       GCCGCA-GCCGC TGGAAG GCAGCGTGCGGC        ACACGCGGCCGGCAG  59 83
APT56_RS10405 2317416 .. 2317439 -  -3.6  -3.92641   AACCCGACTCAGAAA          GGCCGCGAGG AAAG CCGCGAGGAC           CACTTCCGCTGCCTG  58 208
APT56_RS10375 2313503 .. 2313534 - -12.2  -2.52933   TGCTAAGCGATGAAG      GGGCG-CCGGCCTCG GTC CGAGGCCGGACGCTT      TTCATTGTGGGCTTG  64 98
APT56_RS10370 2313199 .. 2313220 - -18.7    -4.128   ATGCGCACAGACAAA           CGCCGCGGC GCAA GCCGCGGCG            TTTTGCGTTGGAGGC 100 48
APT56_RS10350 NONE
APT56_RS10345 NONE
APT56_RS10340 2308483 .. 2308523 - -13.9  -3.57144   TCCCCGAGGCGTAAA GCCCGTCGCCCCGCG-CG CTCAAT CGACGCCGGGCGGCAGGC  GCCACGCCGGCGGAA  84 3
APT56_RS10310 2304772 .. 2304787 -  -5.4  -3.60627   TGAGCGCATCGGAAA              CGATTG GTTC CAACCG               TCAGAGGAACGTCAG  55 123
APT56_RS10305 2304046 .. 2304100 -  -5.8  -4.47888   GTAATTGAAAAATAA GGGTTTCGAA-TC-CGCCTCTTTGCA TGGGG TGCAAGGGGTCGCGAGTTCGAATCCC GCCGTCCCGACCAGC  76 166
APT56_RS10300 2301815 .. 2301834 -  -5.1  -4.07568   CGGTCTTGCTCAAAA            TACTGTA TGTTTG TACAGTA             TAATTTGGTCTGAGA  64 276
APT56_RS10290 2301367 .. 2301394 - -16.3  -4.45544   TTCGACGAACGAAAA        CGCCCCAACCC GTGAGG GGGCTGGGGCG         AATGCTCGGCGGCGG 100 108
APT56_RS10280 2298168 .. 2298184 - -13.7  -4.77165   GCGCCCATAACAAAA              GCCGGCA ACT TGCCGGC              TTTGCTTTTGGTGTC 100 76
APT56_RS10110 2263972 .. 2263989 -  -3.3  -3.53012   TGGGCCGTGTCGAAA             TGGCTCG AGGG CGTACCA              CCTGGCCGGGTTCTC  49 360
APT56_RS10105 2263262 .. 2263308 -    -4  -3.73968   AAACTTTTCACCAAA CCGAGCATA-GATCACATTC TCAACAATT GACT-TGATCGTATGCTCGG CCTATCGCTAGGCGT  56 33
APT56_RS10100 NONE
APT56_RS10095 2262178 .. 2262194 -  -9.5   -3.1372   CACGGGGTAGGAATA              GACATGT TGG ACATGTC              AGTTCCCCTCGGCGC  60 24
APT56_RS10090 2261774 .. 2261789 -  -7.5  -3.32963   AGGCCCAGGGGATAA              GCGGC GCACAG GCCGC               CCAGGATGAAGAGGA  58 50
APT56_RS10085 NONE
APT56_RS10080 NONE
APT56_RS10075 2259527 .. 2259546 -  -5.6  -3.30741   AGGGAGAACGATTAA            GCGGC-CGG ATC CAGCGCCGC            TCGGCGGGCGTCGTA  53 2
APT56_RS10070 NONE
APT56_RS10065 2258141 .. 2258156 -  -3.2  -3.04398   GCGCCTGCGGAAAAT              GCTGGA CCGA TCCAGA               CGAGCGGGCCAAAGA  43 101
APT56_RS10060 2256225 .. 2256262 -  -9.9  -2.50016   CCCGACCAGCAATAC   CCTAGGGGGTTAGTGAT AGTA ATCACTAACCCCCTTTC    TCATTTTGGGGACTT  55 26
APT56_RS10005 NONE
APT56_RS10000 2245787 .. 2245806 - -10.7  -5.52384   CCCGGACGAAAAAAA            GCCCCCT GCAAAG AGGGGGC             TTCCCATGGCCCCGC 100 64
APT56_RS09960 2236598 .. 2236628 -   -14  -2.62983   TCCAGGGCTACAGCA       CCCAGCCCGACC GCGACCT GGTCGCGCTGGG       GGTGTCGGCCATCGG  66 469
APT56_RS09950 2234633 .. 2234650 -  -8.3  -2.52464   TGCGGGTGGAACTCA             CCGCGCC GAAT GGCGCCG              GCCTGTGGCGGCGCG  51 414
APT56_RS09940 2232413 .. 2232445 -  -8.9  -3.65827   CAACCGTCATGCAAA      CACTCCCGGAATGGG CGC CCCGCGCCGGGCGCG      GGCTTGGGGTTCGTG  65 84
APT56_RS09935 NONE
APT56_RS09930 NONE
APT56_RS09925 2227869 .. 2227883 -  -5.6  -2.87564   GTATGGGTGCAGAGA               CGGCGC CGC GCACCA               ATGCGGCGATAGACG  47 59
APT56_RS09920 NONE
APT56_RS09915 NONE
APT56_RS09910 NONE
APT56_RS09905 NONE
APT56_RS09900 NONE
APT56_RS09895 NONE
APT56_RS09890 2219819 .. 2219832 -  -8.1  -3.53012   CGGCGCTGCTGGAAA               CCCTG CTGG CAGGG                CATCCCGATTGCGAC  58 321
APT56_RS09880 NONE
APT56_RS09875 NONE
APT56_RS09870 NONE
APT56_RS09865 2214079 .. 2214093 -  -4.2  -3.53012   TTCGCGGCTGGCAAA               CATGGC TGG GGCATG               GGCAAGCCGGATTCG  49 122
APT56_RS09850 2212036 .. 2212058 - -11.9   -2.5751   AGATGACTAGAACAT           GGGGGGCGG CCGTT CCGCGCCCC           GCCGCGCGCGGCGGG  64 307
APT56_RS09840 2211392 .. 2211421 -  -4.1  -4.59511   AACAGTGCTGAAAAA       CGGGCGCGCCATTC CTC GCGCGGCGCACC-G       TCCGGATTCACGCCG  75 33
APT56_RS09835 2210617 .. 2210633 -  -2.1  -3.64703   GCGGCCCCACTGAAA              CGTGAGG ACG CCACATG              GCCATCGAACTGGAG  50 319
APT56_RS09775 NONE
APT56_RS09770 NONE
APT56_RS09765 NONE
APT56_RS09760 NONE
APT56_RS09755 2193322 .. 2193332 -  -2.4  -2.69468   GATGGCCAGATACTA                 GAGG GAG CCGC                 GGCGCGGCGGTATTG  38 56
APT56_RS09750 NONE
APT56_RS09745 2183310 .. 2183337 -  -3.3  -5.03314   GTCATCCGGAAAAAA        TCCCGCGCACGC CGTCC GCGTGC-CGCGC        TGGTCCTGCCTTGTT  81 83
APT56_RS09740 NONE
APT56_RS09735 2180455 .. 2180487 - -12.6  -3.21695   GTACCAGCAATCCAA     GGCCGGCGCGGCGCG CTAG CGCGCCGC-CAGGCG      GGGCGGGCGCAACGC  71 126
APT56_RS09715 NONE
APT56_RS09710 2173065 .. 2173091 -    -5  -3.53091   AGCGCGGGCCTGAAA         CTGCCCGTGC TGTCCGT GCGCGGCCAG         GGCTACGTGTTCGCC  53 28
APT56_RS09690 NONE
APT56_RS09685 2168410 .. 2168439 - -26.5  -3.73068   GCCTGAATGCAACAA       CGCCCGGGTGGCC GCAA GGCCACCCGGGCG        TTTTCGATGCACGAC 100 88
APT56_RS09675 NONE
APT56_RS09670 NONE
APT56_RS09620 2154722 .. 2154740 -  -5.8  -3.28712   TCGGGGGGCCGACAA             CGCGCTGC CGG GCCGCGCT             TTCACGCTGACCTTC  52 145
APT56_RS09610 2152374 .. 2152410 - -15.2  -3.17146   CCGCCTCACAAGAGA    CAAGGCTGGTTTCCGA TGGCG TCGGCAACCGGCCTTG    TGTTTTTGCAATCAT  80 37
APT56_RS09495 2124386 .. 2124405 -   -15  -5.41143   TACCCGCGAAAAAAA            GCCCCGGA CGGG TCCGGGGC             TTTGCGCGCGCGGCG 100 51
APT56_RS09450 2116788 .. 2116809 -   -13  -3.96148   GCGTTCCATGACAAA           GGCCAGCC TTTACG GGCTGGCC            TTTTTGTTTGGCGTG  89 70
APT56_RS09410 2108049 .. 2108096 -  -5.7  -3.14344   GAGGCCTTCGAGGAA GACCATACCGCCATGATCACCAC GGGC GCGGTCAGCATGGC-AT-TGGTC AAGCCGTGCACGCGC  50 258
APT56_RS09375 2102071 .. 2102082 -  -2.2  -3.23216   GGTCATGATGAGGAA                CTCCG GAG CGG-G                AAGGGCGGGTGACGG  44 75
APT56_RS09370 2100326 .. 2100344 -  -2.2  -3.53012   CCCCGTTGTGGGAAA             CCCCGGGC CTG GCCATGGA             CCTGTTCACGGCGCC  47 402
APT56_RS09340 2093056 .. 2093081 - -12.5  -3.05384   TCGCGCGGTATTGAA         TGCGCGCCGCCC CCA GGGCGGCGC-CT         TCGTTCACAGCACGC  69 44
         rho 2091652 .. 2091687 - -20.6  -2.90496   CCGCCCCTGAAAGCA    TTTGGCGAGGACCGCC GTGG GGCAATCCTCGCCAAA     TCGATGCGTGCGCCC 100 61
APT56_RS09320 2084494 .. 2084508 -  -2.7  -4.61231   GGACATGGTGAAAAA               CCGGC GGTAA GGCGG               AAAACTCCTTATTTT  70 104
APT56_RS09315 2083734 .. 2083752 - -10.2  -3.05844   GTCGCCATCGGAATA             CCGGCGCC AGG GACGCCAG             CCGGACGATGAATCG  63 83
APT56_RS09260 NONE
APT56_RS09255 2072930 .. 2072946 -  -9.4  -4.44448   ATTACGTCAAATAAA              GCCCCT TTTGC AGGGGC              GGGTCGGCTTGGGTG  83 48
APT56_RS09250 NONE
APT56_RS09245 NONE
        emrB 2068481 .. 2068501 - -18.3  -4.93547   TGAAGGAATGAAAAA            TGCCCGGCG GAT CGCCGGGCA            TTTTTGTTTTAGGGG 100 48
APT56_RS09220 2063842 .. 2063861 - -10.6  -4.74103   CGGGTAATGGAAAAA            CCGCGCGG AAAA CCGCGTGG             AAATTACTGCGCTTC  95 29
APT56_RS09215 NONE
APT56_RS09210 2061444 .. 2061492 -  -3.8  -3.53811   TGGACGGGGTCGAAA CTGCCGCC-CAGGAGCCCGATACG CTT CACACCCAG-TCCCGCGGCGTCAG GTAGGCAGCCAGCTC  51 2
APT56_RS09205 2060826 .. 2060844 -  -3.7  -3.82202   TAGCTGCAAATATAA             CCCGCTG ACGGA CGGCGAG             TGCCGGTTTCCGTGG  58 66
APT56_RS09200 NONE
APT56_RS09195 NONE
APT56_RS09190 2059223 .. 2059249 - -17.3  -4.63527   TGATCACGTCAAAAA        GCCCCCGGGACC GCAA GG-CCCGGGGGC         TTTTTTCATGGGATT 100 49
APT56_RS09180 NONE
APT56_RS09175 2054058 .. 2054085 - -24.2  -4.88293   AACCCCAAAAAGAAA        CCCCCGTGCGGC TGGC GCCGCACGGGGG         TTTTTGTTTGACGGC 100 61
APT56_RS09145 2045788 .. 2045801 -  -9.5  -3.76492   GCCAACGGCAGGAAA               GCCGC GATG GCGGC                TTTCCTGTATCACGC  71 81
APT56_RS09140 2044819 .. 2044840 -   -13  -5.75342   TGCTGGCAAAAAAAA           GGACGGCC GCGTCG GGCCGTCC            TGTCGTCGATCAACG 100 49
APT56_RS09130 2041554 .. 2041600 -  -9.9   -3.5764   AACCGGACCGCGAAA CGGTGGCGCCGGCGGGTCACG CCGAC CCTGGCGCGCCGGCATGACCG GCGTGTGACAGGCCG  68 443
APT56_RS09110 NONE
APT56_RS09105 NONE
APT56_RS09100 2035763 .. 2035787 -   -10  -4.40561   CCGGCCCAAAAACAA          CAACGGGACC GCCAG GGTCCCGTTT          TCATGCAATGCGATC  88 55
APT56_RS09060 2025229 .. 2025247 -  -4.5  -3.31792   CGACCAGGGCCAGAA            GCAGGCCA TCTT CGGCC-GC             CAGCTGCTGGCGCAC  49 328
APT56_RS09040 2016818 .. 2016839 -  -8.6  -4.57073   TAGGGCCCCCAAAAA           GCCGCGGG GGCGGG CCCGCGTC            ACAGCTTCTTGATGA  84 24
APT56_RS09035 2016387 .. 2016412 - -19.1  -3.44146   GCCGGCCAGAAGCAA         GAAGCCCCTCG CGGA CGAGGGGCTTC          GCAGGCGTGCCGCGC 100 58
APT56_RS09030 2014313 .. 2014337 - -12.2   -5.8187   CAGGCAACAAAAAAA         CCCCAAGACGC CTCG GCG-CTTGGGG          TTTTTCGTTGCGCGT 100 45
APT56_RS09000 2006500 .. 2006527 -  -8.4  -2.63382   GGCTACACCCACAAG        CGCCG-CGCCC TGTTCAT GGACGGCGGCG        TGGTCTACATGTATT  51 522
APT56_RS08950 1996985 .. 1997043 -    -8  -2.80113   CAGGAGCGGATGACA GGGCGCGCGGCGG-CAGGGGGCGG--GCGG AAA CCGCTTCCGTCCGCCGTCCGCGGC-CGCGC CGACCTTGCGCTTAC  52 37
APT56_RS08945 NONE
APT56_RS08940 1994862 .. 1994877 - -11.8  -4.14392   GCGTAAGCCCCAAAA              GGCCGC CCGC GCGGCC               GGCCTGGGGCGGGCC  85 296
APT56_RS08895 1984044 .. 1984060 - -15.1  -4.13654   TGCCGAAACCACAAA              GCGCCCG AAC CGGGCGC              TTTTCCATTTCAGGC  95 118
APT56_RS08885 NONE
APT56_RS08880 1981370 .. 1981387 - -12.7  -5.71712   GCGGATACAAAAAAA             GCAGCCC CACG GGGCTGC              TTTTTTCATGGGCTA 100 46
APT56_RS08850 1975865 .. 1975921 - -13.7  -3.65314   TCGAACCTCGAAGAA CTGGACCGGCTGCGCGCCATGGTCAAC GATAT GCTGTTCCTGGCGCGC-GCCGA-CCAG GGCGAGGCCGCCACC  78 496
APT56_RS08820 1966791 .. 1966814 - -15.3  -5.45652   ATGCGTAATAAAAAA          GCCCCTCGG TGGTTG CCGAGGGGC           TTTTTTGTTGGGCGG 100 50
APT56_RS08815 NONE
APT56_RS08810 1965014 .. 1965033 - -10.6  -3.14132   GGTGGCGGCCAGGAA            GCCGGCGC TGTG GCGCTGGC             GGCGGGCGGTGTTTT  60 487
APT56_RS08745 1951584 .. 1951609 - -16.3  -4.99134   AGCGCAAAGCAAAAA         CCCCGAAAATC TCGC GATTTTCGGGG          TTTTCAACTTTTTGC 100 107
APT56_RS08735 1950551 .. 1950574 -  -9.4  -5.79595   CCGGAAAAGAAAAAA          CCCCGGACGC TTTC GCGAACGGGG           TTTTTCTTGGCGCAT 100 69
APT56_RS08725 1948731 .. 1948750 -  -4.9  -3.85698   TGGCGGCGGCAGAAA            TGGGCGC GAAAGG GCGCTCA             TTCTACTTGCCGCGC  60 23
APT56_RS08720 1947652 .. 1947671 - -12.8  -4.27062   CGAAGGAAAAGCAAA            CGGGCGCG TCGC CGCACCCG             TCATCGTGGCGTCCA  95 126
APT56_RS08715 1946338 .. 1946354 - -10.8  -5.08824   CGCGGACGTAAAAAA              GCCCCC TTTTC GGGGGC              CGGTGCTGGAACAGT 100 46
APT56_RS08710 1944219 .. 1944233 -  -2.7  -3.05844   TGCTGCATGCCAAGA               CGGCG GTGGT CGACG               GGGTCTGGTCCACCG  41 307
APT56_RS08695 NONE
APT56_RS08690 1939923 .. 1939935 -  -3.3  -3.05384   TTTCGGCCGATGCAA                CTGTC CCA GGCAG                CTTTTTTTGCTGGCC  43 44
APT56_RS08685 1939733 .. 1939755 - -13.5  -4.98531   GGCCTAAATGAAAAA           GGCCTTCAC GCAAA GTGAAGGCC           TTTTGAATTCCTTGG 100 38
APT56_RS08665 1937074 .. 1937089 -  -4.6  -4.07568   CCCGGGCGTCGAAAA              GCGGGA TCGA TCCCGG               TTCAGCCGCGCAGCG  64 50
APT56_RS08655 1935389 .. 1935403 -  -3.4  -3.54129   GATACCGTGCTGAAA               GAGGCC GCT GACCGC               ATGGCGCGTGCCATC  51 356
APT56_RS08630 1931044 .. 1931059 -    -6  -3.51232   TCCGTCGCAAACGAA              CTGGCG TTGA CGCCCG               GCACGTTCAACATCC  55 298
APT56_RS08545 NONE
APT56_RS08540 1914768 .. 1914808 - -13.9  -3.14132   TCGCCCCCCGAGGAA GCCGCCGTC-GCGCCGGC CGCCAC GCCGGCGCCGCCGCCAGC  CGAGACCTCGTCCTC  72 523
APT56_RS08515 1911658 .. 1911671 -  -9.5  -3.53091   ACCTGCCGCGCGAAA               GCCCG CCGG CGGGC                CCTTCTGGCGGCGTC  65 52
APT56_RS08510 1910445 .. 1910469 - -24.3  -3.40867   TCACGCACGAATGAA          CCCGCCGCGGC ACG GCCGCGGCGGG          TTTGCGCTGGCTCAG 100 37
APT56_RS08505 1909614 .. 1909631 - -12.7  -4.13767   CGCCGCATGCGAAAA             GCCCCTC GAAC GAGGGGC              TTTTCTTTTGGCGCG  89 95
APT56_RS08490 1906859 .. 1906879 - -15.4  -3.60296   GAGCCGGACGTGAAA            CCGGCCGC GCGAG GCGGCCGG            AGCGGTGCGGATGGG  90 54
APT56_RS08470 1902665 .. 1902680 -  -4.7  -3.05384   GCGGCGGGGATCGAA              GATCG CTCAGT CGATC               TTCACATTGGCTTCT  47 16
APT56_RS08465 1901623 .. 1901646 - -13.9  -5.07652   CCGTCCAAAAGAAAA          GCCCCATGG GGTTAA CCATGGGGC           TTGGGGGCTCGCGCC 100 104
APT56_RS08460 NONE
APT56_RS08455 NONE
APT56_RS08450 1898180 .. 1898205 -  -4.5   -3.5393   AGGACGTGGCGGAAA         TCGTGGCGCCG CACG CGGCGCAACTG          CGCCAGCGGCTGGCG  54 484
APT56_RS08415 1888900 .. 1888934 - -18.8  -4.74103   GCGGCAAGCCAAAAA     TAATAAAGGCGCACCA CAA TGGTGCGCCTTTATTT     TTCTTACTGAAAAAT 100 46
APT56_RS08405 NONE
APT56_RS08400 1884301 .. 1884320 - -16.4  -5.52384   TCCCGACGAAAAAAA            GCCCCGGC TCAG GCCGGGGC             TTTTTGTTGGGCGAA 100 49
APT56_RS08375 NONE
APT56_RS08370 NONE
APT56_RS08365 1876553 .. 1876574 - -14.5  -5.40072   CCGTGTGGAAAAAAA           GCCCCTTGA TCGC TCAAGGGGC            TTTTTCTTTGGCCGG 100 126
APT56_RS08325 NONE
APT56_RS08320 NONE
APT56_RS08315 NONE
APT56_RS08310 1867289 .. 1867302 -  -9.5  -3.02043   AACGCTGTCGGAAGA               CGGCG ACCC CGCCG                ACGTGCTGGTGCTGA  59 346
APT56_RS08245 1849879 .. 1849907 - -12.3  -2.71712   GCGTTTTGCGCAAAG        CCTGGTGCATCGC CGC GCGTCGCGCCAGG        GGGCGGCCCGCATCG  63 323
APT56_RS08230 NONE
APT56_RS08225 1845594 .. 1845617 -  -3.8  -2.97768   GAAACAAAAAGTAAT          TTCTCCCTGG GAGG CTAGGGATAA           TCCTAGGGACGGAAC  44 89
APT56_RS08220 1843699 .. 1843712 -  -8.1  -6.06723   GCGCGCAAAAAAAAA               GCTCC CAGG GGAGC                TTTTGAAAGGCCGGG 100 77
APT56_RS08210 1842070 .. 1842093 -   -16  -4.72986   CAGCGCCATGAAAAA          GGCCGCTCCC TCAC AGGAGCGGCC           CTTGCCGCGGATCAA 100 51
APT56_RS08180 NONE
APT56_RS08175 NONE
APT56_RS08150 NONE
APT56_RS08145 1831945 .. 1831976 -  -7.3  -4.14739   GTATCCATTGGAAAA     CCGGAAC-CGTGGCC TGGC GGCC-CGCGTTTCGG      AAGCGGCAAAGCTGG  73 255
APT56_RS08130 1830711 .. 1830747 -  -2.8  -2.94099   GCGCCCGACCATACA    GGGGCGACGCGGCG CGCGTCAAT CGGCGCGTCAACCG    TCGGATTCGGGCGGC  42 19
APT56_RS08125 1830167 .. 1830198 -  -7.2  -3.50929   CAAATCACATTACAA      CATTATGC-CGCCCG CAT CGGGCGCGCGTCACG      GCATCGGGAGGGCGG  57 64
APT56_RS08120 NONE
APT56_RS08115 1828721 .. 1828735 -  -3.4  -3.71527   GGGCAATGACGGAAA               GCGGCG GCG CGCCAG               GGCGCCGGAATCGGG  54 118
APT56_RS08110 1827674 .. 1827693 - -16.4  -5.60993   CTGGCCAGAAAAAAA            GCCGCGCC CGAG GGCGCGGC             TTTTTCATGCTGGCG 100 49
APT56_RS08045 1816253 .. 1816279 - -12.3  -4.72272   GGGGCGCATGAAAAA        CCGACAG-GCCC GGGC GGGCGCTGCCGG         TCAAGGGCGCCGGGC 100 100
APT56_RS08040 1814981 .. 1814995 -  -2.8  -5.06414   TGGCGCGAAGAAAAA               TCGG TGTCTGG CCGA               TCAAGTAAGCCGTCC  81 157
APT56_RS08035 1813560 .. 1813579 -   -15  -4.85782   CCCGGCAAAAAGAAA            GGGCTCGC GATC GCGAGCCC             TTTTGCGTTGGCGGA 100 49
APT56_RS08005 1806385 .. 1806419 -  -2.1  -3.09492   GCCGCAAGGGGAAGA    GGCGGGGCAG-TGATCC CAC GGATCAGCCGGCT-GCC    GGCGCCATCTCCAGA  42 13
APT56_RS08000 1805749 .. 1805775 - -10.1  -3.53343   AAGCCGGGCCTGAAA        CCGCGCCGT-GG TATC CCGACGGTGCGG         GGGCGGCCTTACCAG  69 34
APT56_RS07985 1802818 .. 1802839 - -14.5  -5.06414   CGCCCCCAACAAAAA           GCCCCTTGA TCGC TCAAGGGGC            TTTTTCATTGCCGAG 100 120
APT56_RS07975 1799465 .. 1799502 -  -8.9  -3.58037   CAGCAAGCGCGCAAA   GCGTGCGCGGCGTGGGGG CCG CCCCGCCGCCCGGC-CGC   CCGAAGGCGGGGCAG  65 89
APT56_RS07955 1793435 .. 1793479 -  -8.9  -2.72344   GTTCATGCGCAAGTA GGAGCGGGCGGGGCGGCCGCG ATT CGGGGCCGCCCGGCGTATGCC GGTCCACGCCGCGGG  53 51
APT56_RS07940 1789381 .. 1789412 -  -7.2  -2.50492   CACCATCATGAAGAG      CGGCACGATCG-AGG CGG CCTACGAACGCGGCG      AGGTCGATGTCGGCA  48 485
APT56_RS07930 1788356 .. 1788381 - -12.5  -4.19238   CTGGCAATCGGAAAA         GCCGCACATCC TTCG GGGTGCGCGGC          TTTTTTTCGTTCGGG  85 138
APT56_RS07885 1776581 .. 1776602 - -15.1  -4.98531   GCCGCAAATGAAAAA           GGCCCGGCG CAAT CGCCAGGCC            TTGATCAATTTGGTT 100 36
APT56_RS07860 1771680 .. 1771697 - -12.7  -5.18355   GCCAAAAATGAAAAA             GCAGCCC GGGT GGGCTGC              TTCTTGAATTCTGGT 100 37
APT56_RS07855 NONE
APT56_RS07850 NONE
APT56_RS07845 1767944 .. 1767985 - -27.4  -2.72344   CCCGACGCCGAATGA GAC-GCGGGCCGGCCGGGA TGTCT TCCCGGCCGGCCCGCCGCC TGCTCGTCGATCGGG 100 42
APT56_RS07825 1765037 .. 1765053 -  -2.1  -3.35813   CCGTAGTCTAACGAA              TTCCCGC AGG GCGCGCA              GCCCCTCAGATGCGG  45 31
APT56_RS07820 NONE
APT56_RS07815 1763132 .. 1763149 -  -3.3  -2.75577   TCATGTCAAAAGTTA             GGGTCGC CAGC ACGAACC              GCTTTCAGGCGTTCT  40 163
       rpmE2 1762774 .. 1762789 - -10.4  -5.78622   TCAGGGGAAAAAAAA              GCAGCC CGGA GGCTGC               CTTTTTGCTGTGACT 100 59
APT56_RS07805 NONE
APT56_RS07800 1759512 .. 1759527 - -10.4  -5.14965   ACCGCCATGAAAAAA              GCAGCC CTCG GGCTGC               TTTTTTTCGCGCCGT 100 63
APT56_RS07750 1749786 .. 1749802 - -10.8  -2.52464   CCTGCCGGGAATTGA              CGGCGG ATGCG CCGCCG              GACCTGGTCATCGAC  58 426
APT56_RS07735 NONE
APT56_RS07730 1746104 .. 1746115 -  -7.2  -3.92592   AGGCGCAAGAGGAAA                CCGG TCTG CCGG                 CCAATCATGTCGAGG  67 508
APT56_RS07715 NONE
APT56_RS07625 1722112 .. 1722137 -  -3.9  -4.66609   TACCCGACGCAAAAA         CCCAACGCCTGC TGC GC-GGCGTTGCC         GCTGCATCACCATTG  72 367
APT56_RS07615 NONE
APT56_RS07610 1719361 .. 1719396 - -26.2  -5.93809   TGCCCAGAAAAAAAA    CGCCCCACGTCCCGGA ACCG TCCGGGGCGTGGGGCG     TTCGCGTCGAAGGCC 100 71
APT56_RS07530 1701544 .. 1701564 - -18.3  -5.40072   GCCGGGCGAAAAAAA            GGGCCTCGC TAT GCGAGGCCC            TTTATTGTAGCTAGT 100 48
APT56_RS07525 NONE
APT56_RS07520 1699844 .. 1699869 -  -9.8  -3.53012   GCCTTGGCCGGGAAA         GGCAAT-CGGG AGGCA CCCGCATTGCC         CTGCATTGAAGGTAC  65 197
APT56_RS07515 1698419 .. 1698430 -  -3.6  -2.74263   ATTGTACTGGTAAAC                GCGA TAGT CCGC                 TGTGTTTCCGCGCCC  40 78
        ssrA 1697960 .. 1697983 - -14.6  -6.34424   CCGCCAAAAAAAAAA          TGGCCGACCC GTGA AGGTCGGCCA           TTTGGCGCTATGGCG 100 47
APT56_RS07500 NONE
APT56_RS07495 NONE
        nfrB NONE
APT56_RS07485 NONE
APT56_RS07480 NONE
APT56_RS07475 1686470 .. 1686486 -  -2.2  -3.71124   AGCAGGAACAGATAA              GAGTTG AATAG CATCTC              GGGTCAGGGCAGTCG  53 29
APT56_RS07470 NONE
APT56_RS07465 1684635 .. 1684660 -    -4  -3.40403   CTGCCCCCAGGAGAA        TCGTCAG-GCGC GGGC GCGCTCCG-CGA         TGAACGTGGCCAGCG  49 3
APT56_RS07460 NONE
APT56_RS07455 NONE
APT56_RS07450 1680818 .. 1680839 -  -6.5  -3.71284   GCTGGAGCAATACAA           CTGG-GCGCG GCC CGAGCGCCAG           GCGCTGCTGGTGCCG  61 509
APT56_RS07420 1675474 .. 1675495 -  -8.6  -3.05384   CTGTTGTGGATCGAA           CGGCTGGC CGATGT GCCCGCCG            CCGAACGCGCCCTGA  55 305
APT56_RS07405 NONE
APT56_RS07400 1667448 .. 1667467 - -10.6  -5.60993   GCGGGCAGAAAAAAA            CGGGGAGC TTGC GCGCCCCG             TTTTCACATTCGAGC 100 52
APT56_RS07395 1666651 .. 1666661 -  -5.4  -4.75219   CAATGACGAAGAAAA                 CTAC GGC GTAG                 TGCAACATGTCGGCT  80 59
APT56_RS07390 1666021 .. 1666048 - -18.5   -4.8622   GCGCGCAATGAAAAA        CGGCGCCTGTG TGTGAG CACAGGCGCCG         TTTTTCATTGCATGG 100 59
APT56_RS07375 1661915 .. 1661945 -  -4.1    -4.371   CTTATGATATGAAAA       TAACTTCTCCGCA AAGAA TGCAAAGAAATCA       GATTCGGTGATAAAT  69 513
APT56_RS07315 1640573 .. 1640594 - -15.9  -5.10461   GCCAGCCAACAAAAA           GCCCCTCGA TTGC TCGAGGGGC            TTTTTCCCATGCGGT 100 52
APT56_RS07305 1635775 .. 1635793 - -17.4  -3.51825   CTAGTTGAATGACAA             CCGGCGCC TGA GGCGCCGG             TCGGGGACTTGCAAG  93 82
APT56_RS07300 1635004 .. 1635027 -  -7.3  -3.05384   TCTTGCGTGATGGAA          TCGCCCGGC CCCTGT GCCGGGCAT           GCTTTTTTCAGCGAC  55 33
APT56_RS07230 1617106 .. 1617145 - -24.5  -3.15544   TCCGATCGCCATGAA  GCGAACAACCCGCCGGCG TGCGC CGCCGGCGGGTTGTTC-C  TGGGTATCGGCAAGA 100 92
APT56_RS07225 NONE
APT56_RS07220 NONE
APT56_RS07215 1613063 .. 1613088 - -20.5  -3.53012   CGCGTGGCGGTCAAA         GGGCATGGCGC GTTG GCGCCATGCCC          TTTTTTCATGCGGCT 100 31
APT56_RS07205 1607960 .. 1607990 - -22.8   -4.7497   GGCACCGATGAAAAA       GGAGAAAAGCCCCA GGC TGGGGCTTTTCTCC       TTTGCTTTCAGGGCG 100 41
APT56_RS07200 1605407 .. 1605426 -   -15  -5.75342   GCGGCCCAAAAAAAA            GGACGCCC CGTG GGGCGTCC             CTTGCGTGCCGATCA 100 52
APT56_RS07195 1604741 .. 1604751 -  -8.2  -2.70932   CGTGGTCCGGAACGA                 CGCC GTC GGCG                 TGTTCCACTTCGCCA  52 125
APT56_RS07150 1596250 .. 1596307 - -15.8  -2.78679   CCGCGGCACGTAAAT CTGTCCCCTTCGCGACAATTCC-TTGCG CGCT CGCAAAGGGACGGTCGCAAAGGG-ACAG GTTTGCGTGCCGCGG  80 117
        prpB NONE
APT56_RS07140 1593861 .. 1593914 -  -8.8  -3.10344   TCCTGAGTGAATACA GGCGGCACTGGGCCCGCGCGGCGC GGGGGAAG GCGTCG-GCAGGCCCA-TGTCGTC GTCCTACTTGCGCTT  57 29
        prpD 1592084 .. 1592098 -  -9.2  -3.53012   GCCCGCCCCCCCAAA               CCGCCG CCG CGACGG               GCTACGGGTTTCGAG  65 311
APT56_RS07130 NONE
APT56_RS07125 1589533 .. 1589559 -  -7.9  -4.13767   GCCGGCAGCTGAAAA        GGGGGCGA-GCC CGGG GGCGCCGCCCCG         GGGCGTACCGAGGTC  71 39
APT56_RS07120 1589059 .. 1589076 -  -9.8  -5.93809   CGGCCATAAAAAAAA             CCCGCC GGTAAG GGCGGG              TCTATAAAAGGGGCT 100 90
APT56_RS07115 NONE
APT56_RS07110 NONE
APT56_RS07105 1586594 .. 1586607 -  -3.1  -3.90112   TGCCTGGGAATGAAA               CCATC CCGC GATGA                CCGTGACATGAAAAA  56 103
APT56_RS07100 1585674 .. 1585693 - -12.2  -3.09492   CCGTGAACTGCAATA            TCCCCGTT GCGT AACGGGGA             CGTATAAGGGTTATC  69 39
APT56_RS07095 NONE
APT56_RS07090 NONE
APT56_RS07085 1582243 .. 1582282 -   -23  -5.40072   TGGGGCGCAAAAAAA  GGCGGTCATGGCCG-GCCA GTG TGGCGCGGGCATGACCGCC  TGTCGATGCGTACAA 100 68
APT56_RS07080 1581087 .. 1581114 -  -8.2  -3.17075   CTTGCGTTAATGTAA        GCGGGCCGCGGC ACGC GCCGCGGCCTTG         TTAGCGCCACGACTG  57 482
APT56_RS07055 1576363 .. 1576377 - -12.8   -4.5442   CCTGCAATGACAAAA               GGCCCC AAC GGGGCC               TTTTGTCATTGCGCT 100 71
APT56_RS07005 1564306 .. 1564321 - -11.8  -3.75292   AGGCATCATGAATAA              CGCCCC GCAA GGGGCG               TTTTTCATTGAGGGC  80 81
APT56_RS06985 NONE
APT56_RS06980 1559557 .. 1559579 -  -4.9  -2.70932   GCCTTGGTCGAACTA          TGCCTGCGCGG TGT CCGC-CAG-CA          GCGCGGCATAGCCAG  44 0
APT56_RS06975 NONE
APT56_RS06970 1558012 .. 1558044 -  -8.4  -2.55074   TGCAATGGTAACGGA     CAGACGCG-GCGTCA GCCA TGATGCGCGCGACTG      TCGCCCGGCGCCTGG  53 4
APT56_RS06935 1548837 .. 1548876 - -25.2   -2.6155   GCCGCGAAGAGGAAT  GAAAAACGCCGCCGGACT GGCA AGTCCGGCGGCGTTTTGC   TGTCTGGATCAGGCC 100 114
APT56_RS06910 1542757 .. 1542795 - -13.8  -2.70525   CGCCTGGAAAGCAAG  GGCGGCGACG-ACCCGG TCGCGT CCGCGCGCGCCGCCGCC   GAACGCTCGGCCAAG  67 496
APT56_RS06900 NONE
APT56_RS06895 NONE
APT56_RS06890 NONE
APT56_RS06885 1538421 .. 1538445 - -20.1   -4.8622   CGCTCCAATGAAAAA          GGGCCTGCATG GTT CATGCAGGCCC          TGCGACTGTGACAGC 100 48
APT56_RS06880 NONE
APT56_RS06875 NONE
APT56_RS06870 1535148 .. 1535162 -  -4.9  -2.60723   CGAGGGTGAATCAAT               CCAGC GTGGT GCCGG               CGGCCTTGATGAGAT  43 6
APT56_RS06865 NONE
APT56_RS06860 NONE
APT56_RS06760 NONE
APT56_RS06755 NONE
APT56_RS06750 1513665 .. 1513681 -  -2.9  -3.29144   CTACTGGTGGCATAA              GGCCG GCAAGAA CGACC              TGTCGCAGCCAATCC  45 128
APT56_RS06725 1506733 .. 1506754 - -15.9  -5.63517   CTGGCAAATAAAAAA           GCCCCCATC ATTC GATGGGGGC            TTTTGCTTGCGCGGC 100 47
APT56_RS06695 1499987 .. 1500031 -  -4.8  -2.68823   CGCGCGGGACAGAAT GCGGACGCGGCTGCCCGGGCCA TCG CGGCCCGGGC-GC-ATTCCGGC GAAGTTCAGTGGTCC  44 31
APT56_RS06685 NONE
APT56_RS06680 1496021 .. 1496042 - -17.3  -4.25104   CGCGCCTGATGAAAA           GCCCTCCGG CATG CCGGAGGGC            TTTTTTTGGGTCGTC 100 148
APT56_RS06665 NONE
APT56_RS06660 NONE
APT56_RS06655 1491565 .. 1491583 - -13.1  -4.24384   ACGAGCAAAAGCAAA             GGGGGCC GCGCG GGCCCCC             GTGGACGGACGGTGA  95 47
APT56_RS06650 NONE
APT56_RS06645 1489977 .. 1489993 -  -2.2  -4.42238   GCAGGGTAAGGAAAA              TCATGC GGACG GCATGG              TTTTCTATAAGAGTT  65 300
APT56_RS06640 NONE
APT56_RS06635 NONE
APT56_RS06630 1487090 .. 1487124 - -15.7  -2.71097   AAGCGGACAAATTCA     GGACGCGACCCGGCC GCGCG GGCCAGGTCGCATCA     ATGGGTCGCATCGAC  78 46
APT56_RS06625 NONE
APT56_RS06620 1485118 .. 1485142 - -18.6  -3.06312   AAAGGTCCCATGCAA          TCGGGGCCGC GTTCA GCGGCCCCGA          GGGTCAGGCAGGCGA  89 62
APT56_RS06615 1483969 .. 1483981 -  -3.3  -3.28791   ACCGTTGTGCCAGAA                CAGGG CAT CCATG                GTGGTTTCCTTCGCG  45 100
APT56_RS06610 NONE
APT56_RS06605 NONE
APT56_RS06600 1480284 .. 1480299 - -10.4  -2.62735   AGATCTTCCACATCA              TCGCGC GCCT GCGCGA               GACCGGCGTGGCGAT  55 235
APT56_RS06560 NONE
APT56_RS06555 1472379 .. 1472402 -  -7.3  -3.87815   CGCCATGGGGAGAAA          GGGCCGGAC ACCGTG GCCCGGCCG           AGTACGTCAGGCCTT  67 32
APT56_RS06545 1471220 .. 1471241 -   -13  -5.93809   CGCGCACAAAAAAAA           CTGCCCGC GCAGGG GCGGGCAG            TTCTTGGAGGCGGGA 100 48
APT56_RS06525 1462628 .. 1462656 -  -8.8  -3.01712   GCGGGCCTGGCAAGA        CCTGAAGCTGGC CTCCC GCCAGCTGTAGG        CGGGAAAGCCTTTTC  56 88
APT56_RS06510 NONE
APT56_RS06505 1458095 .. 1458107 -  -4.1  -2.71712   GGCGGTGCCTCAAAC                CGTAA ATT CTACG                CTATGGATTATCGTT  42 26
APT56_RS06500 1457456 .. 1457493 - -21.3  -3.65902   TCTAGCGCAGTTAAA   GCCCGGCGAAGGACCTG CGGA CAGGTCCCCGGCCGGGC    TGGAAATTACAGCGT 100 32
APT56_RS06495 1456850 .. 1456873 - -18.2  -4.27316   CCCGCCAATGCAAAA          GCCCGCCTGT TCGC ACAGGCGGGC           TTTTTCATTGTTTCG 100 59
APT56_RS06475 NONE
APT56_RS06470 1448840 .. 1448866 - -16.7  -2.87564   CGACGCTGGCAGACA         GGAAAGCCACC TTCGC GGTGGCTTTCC         CGGGTGGCGCGGCTG  84 49
APT56_RS06380 NONE
APT56_RS06375 NONE
APT56_RS06370 1427565 .. 1427576 -  -3.6  -2.70932   CCGTCTGCTCAAGCA                CGCC TTCG AGCG                 CGTGCGGCCCGAGCA  40 318
APT56_RS06330 NONE
APT56_RS06325 NONE
APT56_RS06320 1413543 .. 1413566 - -10.2  -3.57144   TGGTGGATTCGGAAA          GCC-GCAGCGC GGG GCGCGGCCGGC          CCACGCAGATCTGGT  67 518
APT56_RS06285 NONE
APT56_RS06280 NONE
APT56_RS06275 1398434 .. 1398465 - -23.8  -3.39895   TCCCGCATCAAGGAA      CAGGCCCCCG-CGCC GTA GGCGTCGGGGGCCTG      TGGGCGCCGCGCGGG 100 57
APT56_RS06270 NONE
APT56_RS06265 1395301 .. 1395320 -   -15  -3.75629   TATTTGCAATGCAAA            GAGGCCGC TTTC GCGGCCTC             TTTGCTTGGCGTTGC  89 46
APT56_RS06225 1384500 .. 1384517 -  -4.8  -3.57144   CGGCCTATCTGGAAA             CCACCG CGGTGC CGATGG              AGGAGCGCGACCGCT  54 136
APT56_RS06215 1382661 .. 1382686 -  -3.9  -2.70932   CTTGTTGGGCAAGTA         GGGCGCCGCG GTTCCGT CGCGG-GCCG         CCGGCTCAGCCCGCC  42 31
APT56_RS06205 1381200 .. 1381231 - -21.6  -3.25823   CTGGGTGTATATCAA      GGCCTGACGCGGCG TCCG CGCCGCCTCAGGCC       TTAGGACCGAGCCCG 100 69
APT56_RS06185 1378976 .. 1378990 - -11.4  -3.61398   CGCGTGCGGCAAGAA               GGCGGA GTA TCCGCC               CGAGGTGCAACGCGC  71 310
APT56_RS06175 1377787 .. 1377803 -  -5.8  -3.68529   ACCGCATCATCGAAA             GCGTGCC GGTG GGC-CGC              CTGGGCACCGCCAAG  61 189
APT56_RS06160 1371322 .. 1371336 -  -2.1  -3.44051   CTTCGATCACCAGAA              TC-CGC ATGC GCGAGA               TTGTCGCATGGCGGC  47 133
APT56_RS06155 1370581 .. 1370605 -  -6.4  -3.16668   GAACAGCGCCAGCAA         CAT-CGCCAGC AGGC GCCGGCGCACG          GAAATACGGCGGGGC  51 50
APT56_RS06150 NONE
APT56_RS06145 1367715 .. 1367726 -  -5.8   -4.2349   CCGGCATACGGAAAA                CACG CCGA CGTG                 CACGCCGGGCAGTTT  69 446
APT56_RS06120 1361381 .. 1361408 -  -9.1  -3.53012   GGGTGCGCTGGGAAA        GCGCCAGCGGCT TCACC AGCCGC-GGCCC        GGGCGGCCAGCAGTT  61 193
APT56_RS06075 1351800 .. 1351820 -  -6.1  -3.72576   CCGGGCCTGATGAAA            CTGGACG CCGAGAT CGCCCAG            CGCCTGAAGGGCGAC  61 494
APT56_RS06060 1343571 .. 1343598 -  -9.8  -3.21099   GCGCCGCATCATCAA        GGGCCTGGGC AACGGCCA GCCCACGCCC         AAGTGGGTGCTCAAG  60 343
APT56_RS06045 1341420 .. 1341461 - -11.4  -3.06796   GCTGATGGCATCCAA GTGGCCTGACGACGCCAC CGCCAC GCGGCCGCGCCCGGCCAC  GGTGGTGATCTGGAA  62 216
APT56_RS06030 1338452 .. 1338470 - -17.4  -4.00782   CGACAGCATGAGAAA             GGCCGGCG GAT CGCCGGCC             TTTTTTCTTGGTGGC 100 77
APT56_RS06010 1335435 .. 1335470 -  -4.4  -2.73364   GGGTGACTGCAAGGA    CCTTGGCGGCGGCCGG TGGT CATGCCGCCTGCAGGG     CGAGTACCGCGACCG  40 413
APT56_RS05980 NONE
APT56_RS05975 NONE
APT56_RS05965 1324902 .. 1324915 -  -8.1  -4.08692   GAATTTTGCGTAAAA               GGGCA ATGG TGCCC                GAGACCGGAATCGAA  71 463
APT56_RS05960 NONE
APT56_RS05955 1323324 .. 1323335 -  -3.6  -3.54459   TGAACTTCGCTGAAA                CCCG CTGG CAGG                 GTGTCGGTACTTCTC  51 286
APT56_RS05930 1319662 .. 1319680 -  -3.7  -3.89215   CTTCAGAAATCGAAA             GCCCGCC TCGGT GACGTGC             CCCCGGCATATCCAT  58 71
APT56_RS05920 1317744 .. 1317768 -    -5  -2.78384   GCGGCCCGGAGCATA          TCCAGGAAGT GATCG ACATCCTGAA          CGCGGCCGGTTTCAC  43 64
APT56_RS05895 1312250 .. 1312268 - -11.7  -5.37593   CGCCAAACGAAAAAA             CCCGCCT GATGA AGGCGGG             TTTTTTCGTGGTGGA 100 42
APT56_RS05870 1305141 .. 1305195 -  -3.8  -3.53091   AGGCCGGCCTCGAAA GGGCCGGCTTTTTTTGCGCCCCGGCG AAG CGCGGCGGCTCGATTCAGGCCGGCGC CGCGACCGGCGGCGC  51 14
APT56_RS05850 1301761 .. 1301782 - -14.5  -5.33026   GAAGGCAAAGAAAAA           GGCCAATCC CGGG GGATTGGCC            TTTTTTGAATACTGG 100 38
APT56_RS05830 1297521 .. 1297544 -  -6.6  -2.57211   ACCTGGCGGCATAAG          GCGCGGCGGCC GGT GGCCGC-ATGC          ATGCCGCGCGGGCCG  47 42
APT56_RS05815 1295316 .. 1295359 -  -6.9  -3.19602   CCCCTGACAGCAACA CCGGT--GCGCCA-G-CGCCA GTCGGT TGGCGGCCTGGCGCGGACCGG CAGGGCCGGCGGACA  54 42
APT56_RS05810 1294644 .. 1294663 - -13.6  -5.00884   ACCCTGTGGAAAAAA            GGCCACTC GCAA GAGTGGCC             TTTGTATTTATTGCG 100 63
APT56_RS05790 1288736 .. 1288756 - -19.7  -2.53876   CGGTAGCGCAACGGA            GCGCGCGGC CGC GCCGCGCGC            AAAGGCTCAGAAAAA  89 32
APT56_RS05785 1286986 .. 1286997 -  -5.8  -3.38046   GTGGCATCCTAAAGA                TCGG CGCG CCGA                 CGCGGGCGCTGTGGT  53 82
APT56_RS05780 NONE
APT56_RS05775 1285043 .. 1285059 -  -3.6  -2.82516   GCGGTCATGATTACA              GCTCCT TGCGC AGGCGC              GGGTCGAGCACGTCG  41 4
        dppD NONE
APT56_RS05765 NONE
APT56_RS05760 NONE
APT56_RS05755 NONE
APT56_RS05750 1280179 .. 1280206 -  -2.7  -4.27316   GCGGGCAACCGAAAA        CACTACTGCTCA CGCCT TGAGC-GTCGCG        TCAGGTCACGGGCGC  63 31
APT56_RS05735 NONE
APT56_RS05730 NONE
APT56_RS05725 1274605 .. 1274635 -  -4.5  -3.55444   GGCGGATGGGGGAAA      GGGCGGCCCTGACC AGCA GGAG-GGGCGGCCC       CGGGCTTGCGCCCGG  51 47
APT56_RS05710 NONE
APT56_RS05705 NONE
APT56_RS05700 NONE
APT56_RS05695 1266769 .. 1266792 -  -8.8   -2.9155   GCTGGCAATACTATA          CGCCGGCG TGTCATTT CACCGGCG           CCAGCTGGTCCAGCG  56 12
APT56_RS05690 NONE
APT56_RS05685 1263199 .. 1263254 -  -8.3  -2.66255   GGTCAATACAACCCA TCGCTCCGCCTGGCTCAGCGCCT-GCGC GCG GCGCGAGACG-TCAGCCCG-CGAAGCGG TAGCCCACGCCGATC  53 10
APT56_RS05680 1262153 .. 1262166 -  -3.7  -4.61231   CGAGACGCGTAAAAA               GCGCG TCAA CGCCC                GGGCGTTTCAGAAGG  75 33
APT56_RS05675 NONE
APT56_RS05670 NONE
APT56_RS05650 1256123 .. 1256140 - -12.7  -5.08824   CCCGCATGCAAAAAA             CCCTCGG TTCG CCGAGGG              TTTTTCCTTGGGCGC 100 58
APT56_RS05635 NONE
APT56_RS05630 1252732 .. 1252766 -  -4.8  -3.28712   GGTGGGGTTCGAGAA     CGCGGCGGGCGAGC TGATGGC GTTCGCCAGCTACG     GCACGTTCCGCGCCT  49 377
APT56_RS05610 1248245 .. 1248264 -   -15  -5.75342   TTGTGGCAAAAAAAA            GCCCCTGC CTGA GCAGGGGC             TGGGGATGCCGGGAA 100 50
APT56_RS05605 1247368 .. 1247385 - -14.1  -6.06723   GGGGCGAAAAAAAAA             CCGCGGC TTGC GCCGCGG              TTTCACTACGGGTAC 100 253
        ppnK NONE
APT56_RS05560 1237536 .. 1237556 - -12.6  -4.55798   TAGTTGAAAGCAAAA            GCCCCTTC TATAT GAAGGGGC            TTTTTTTATTCTCGG 100 188
APT56_RS05550 NONE
APT56_RS05545 1235516 .. 1235531 - -10.4  -5.52384   GCTGCATGAAAAAAA              GGACCC TCGC GGGTCC               TTTTTTTCATGGGCG 100 49
APT56_RS05535 1234043 .. 1234056 -  -9.5  -5.37593   GCGGAAATGAAAAAA               GGGCC CGCA GGCCC                TTTCTTGCAACATGC 100 69
APT56_RS05530 1233098 .. 1233119 -  -3.6  -3.37354   CACACCGATGCACAA           CTACACCG TGCCGT CGGCGTTG            AAGGCGTGGATCGAT  47 395
APT56_RS05515 1230666 .. 1230680 -    -5  -3.62522   CAACTGTCCGAAGAA               GAAATC TCG GATCTC               ACCTTTCTGGTGGTG  54 187
APT56_RS05505 1229745 .. 1229765 -  -3.2  -5.40072   CGGCCCGCAAAAAAA           GTCGCCGCA ACGA TGCG-CGGC            GGAGTTCGTCGCGAA  93 249
APT56_RS05500 1229452 .. 1229478 -  -4.4  -5.46657   TACTGCAAGAAAAAA        GGAAGC-TCGG TATAGG CCGGTGCTTCC         TTTTTGTATTTGGAG  93 36
APT56_RS05495 1229306 .. 1229317 -    -3  -3.65046   GCGTCACCTTAACAA                TCAA TCGA TTGA                 CCGGGCGTAGGGATG  51 68
APT56_RS05490 NONE
APT56_RS05485 1228054 .. 1228077 - -11.1  -3.53224   GAGGGGTTCCGCAAA          TTTGTCGCG TTCCTG CGCGACAAA           TACCCGCAGTCGAAA  69 287
APT56_RS05470 NONE
APT56_RS05465 NONE
APT56_RS05460 NONE
APT56_RS05455 1224019 .. 1224049 -  -3.9  -3.60296   GAGCGGGATTGTAAA      GCGTCTTTGGCCGGC CTT GCGGGCC-AGG-CGC      GGCGGCGGATCAGGC  53 35
APT56_RS05450 1222824 .. 1222844 - -12.5  -2.72991   GCAGAGCTGGAATTA            GGGCCACCC TTC GGGTGGCCT            CTTTTTTTGCCCTTT  65 143
APT56_RS05440 1220704 .. 1220730 - -15.9  -4.72272   CGCGGCCATGAAAAA         GCCCCCCGGTT TCAGC AACCGAGGGGC         TTTTTCATGGAGTTG 100 103
APT56_RS05420 1217503 .. 1217519 - -10.8  -4.72272   CGCGCCCATGAAAAA              GCGCCC AGCCA GGGCGC              TTTTTTCATTCGGCA  95 46
APT56_RS05405 NONE
APT56_RS05400 NONE
APT56_RS05395 1210064 .. 1210076 -  -4.7   -3.4072   GATCTTCGACTACAA                GCTGG TCG CCGGC                ATTGTCGCCATCCTG  52 131
APT56_RS05380 NONE
APT56_RS05375 NONE
APT56_RS05370 NONE
APT56_RS05365 1205878 .. 1205897 - -11.4  -3.20382   GCGCAGAGCGAGGAA            CGCACCGG CAAG CCGGTGCA             GGCGCGCCGCGACCT  64 252
APT56_RS05355 1203639 .. 1203657 -    -3  -3.05384   GCGGCGGGTAGTCAA             GCCGGC GCGCGTG GCCGCC             GTGTCATTCCGGCAG  43 29
APT56_RS05325 NONE
APT56_RS05315 1192849 .. 1192900 - -11.9  -3.05463   ACCGGCTCGATCGAA CCCTCTTTTTTCGTCCGCAACTGCT TGGT AACAG--GCCGACGAAAAAAGAGGA GGATCAGGCCCGGAA  69 29
APT56_RS05310 NONE
APT56_RS05305 1191476 .. 1191515 -  -3.5  -3.59979   GGTCGGGATGGGAAA TCTGTCATGCGGGGCGCGCC AGC GGC-CGCCC-GCGCGGC-GA TGCGCTATACCTGGA  51 30
        purH NONE
APT56_RS05295 NONE
APT56_RS05290 1188423 .. 1188441 -  -8.8  -3.35679   CCTGCGCAGCGACAA             CATCTGCG GCG CGCCGATG             GCGCCCGAGCTGAAC  59 201
APT56_RS05260 NONE
APT56_RS05255 1179144 .. 1179179 -  -4.5  -3.53012   TCGTCGCCGCCGAAA    TGCTGCTGGCGC-GCC TGCCG GGCCGCGCCGACCGCT    TCAGCTGGCTGCCGT  52 388
APT56_RS05240 1175091 .. 1175104 -  -9.5  -5.60993   CTGGCCATAAAAAAA               GCGCC CGAA GGCGC                TTTTTTCAATGCACA 100 62
APT56_RS05220 NONE
        minC 1169506 .. 1169518 -  -2.6  -4.99134   ATCGTAAAGCAAAAA                GCCC GTGTA AGGC                TTCTTACAGAATGTG  79 151
APT56_RS05210 NONE
APT56_RS05205 1168303 .. 1168321 - -17.4  -4.65895   CGCCGCACGCAAAAA             CGCCCGGC ATT GCCGGGCG             TTTTTTTTGCGCGCA 100 83
APT56_RS05180 1163611 .. 1163621 -  -2.4  -3.33261   GCTCAATGGCGACAA                 CCTG CCG CTGG                 TGCTGTATGCGGGGC  45 296
APT56_RS05170 NONE
APT56_RS05165 1161356 .. 1161375 -  -9.3  -3.53012   CGTGGTTTTGGCAAA            GGGCTTC TTTCTG GAAGCCC             TTTTGCTTGTTGGCG  65 75
APT56_RS05130 NONE
APT56_RS05125 NONE
APT56_RS05120 NONE
APT56_RS05115 NONE
APT56_RS05110 NONE
APT56_RS05105 NONE
APT56_RS05100 NONE
APT56_RS05095 NONE
APT56_RS05090 NONE
APT56_RS05085 1141894 .. 1141904 -  -4.6  -4.09864   ACCTATCCGTCAAAA                 CCCG AAG CGGA                 TGCGTGGGACGCCGG  64 41
APT56_RS05080 NONE
APT56_RS05075 NONE
APT56_RS05070 NONE
APT56_RS05065 1136606 .. 1136616 -  -2.4  -3.61398   CTCGGTGGGCAACAA                 CGCC CAG GGCC                 TGTACCTGCTGGCCT  50 291
APT56_RS05055 1134415 .. 1134430 - -11.8  -4.14392   GCGTAAGCCTCAAAA              GGCCGC CCGC GCGGCC               GGTTTGAGGCGGACC  85 325
APT56_RS05035 NONE
APT56_RS05030 1124150 .. 1124160 -  -2.4  -2.71011   ACGGCGGGCGAAGGA                 GGGC GGG GCCG                 GGATCTATCCTACCC  38 61
APT56_RS05025 1123309 .. 1123361 -  -8.9  -2.71364   GCACGCCCGCAATCA CCGCGAGCCGGCCAACCAGTGGCTG CGG CAGGCGGTGGTGGAGCAGTTCGCGG ATTAGGGCGGCGCGC  53 151
APT56_RS05015 NONE
APT56_RS05010 NONE
APT56_RS05005 1119850 .. 1119874 -    -5  -3.80733   CGCATCGGACAAGAA         TGGCAAGGCGC TTAA GCGCATT-CCA          AAAATGGGTGTCCAC  58 284
APT56_RS04950 NONE
APT56_RS04945 1102246 .. 1102259 -  -4.5   -3.7941   CAGCGTTGATAACAA               GCAGT TTAT ACCGC                CGAAGAAACGCTCCC  56 136
APT56_RS04940 1101555 .. 1101586 -    -7  -3.98083   CATGCAATTGAGAAA      TGGGGCGGGCGCCG GGGA CGGCGCCCGGCGGC       GTCAGGGCGACAGGC  67 27
APT56_RS04935 NONE
APT56_RS04930 NONE
APT56_RS04925 1098953 .. 1098972 - -12.1   -4.4078   GCGGGTCAAGCAAAA            CGCCGGC ACGGGG GCCGGCG             TTCATGAGGCATGAG  95 83
APT56_RS04915 NONE
APT56_RS04910 NONE
APT56_RS04905 1093974 .. 1093996 -    -9  -4.25104   GGGCGGGCATGAAAA           TGCCCGCGCG AGG CGGGCGGGAA           GGCGCTCGGAGCGGG  77 57
APT56_RS04900 1092259 .. 1092300 -  -9.5  -3.53012   GCCCGGCTTCCGAAA CGCTGGCCGCCCGGCCCCGC GAGCG GCGG-GCCAGGCG-C-AACG GTTCATTCCAGCGCC  65 28
APT56_RS04890 1089387 .. 1089410 - -13.8  -4.12188   CCACCAGCCTGAAAA          GGAGGCGCCC CGCG GGGCGCCTCT           TGCTTTGTGGCGCGC  93 60
APT56_RS04880 1086884 .. 1086927 - -22.4  -2.83271   CGACGCCCACAACCA TGTATGCCAGGTCCGGCCGC CCGC GCGGCCGGACCTGGCGGGCA ACGCAAAGCCCCTCC 100 305
APT56_RS04870 1083148 .. 1083179 - -18.2  -4.07568   CGGCGCGCCGCAAAA      GAAAATGGCCATGC GCAG GCATGGCCATTCTC       GTATCCGGCGATGTC 100 41
APT56_RS04865 1079999 .. 1080011 -  -4.8  -3.04792   CGATTACCGGCAACA                GCGT GAACT ACGC                CATCGGCCGCTACCT  46 456
        mutL NONE
APT56_RS04850 1076724 .. 1076737 -  -9.5  -3.53012   CCGGTTGCGGCGAAA               GGGCC CGAA GGCCC                GCAGCCGCCTGCGTC  65 39
APT56_RS04845 1076140 .. 1076156 - -10.8  -3.81146   CCTCGCAATCAACAA              CCCGCC CTGGT GGCGGG              TTTTTCTTTCGCTGT  74 45
APT56_RS04835 NONE
APT56_RS04830 NONE
APT56_RS04825 NONE
APT56_RS04820 1071453 .. 1071470 - -10.5  -3.28984   CAAGGTAATCAGGAA             GGCGGCA ACCG CGCCGCC              CAGCGCGGTTCAGTC  65 35
APT56_RS04795 1066338 .. 1066387 -  -9.3  -3.14564   CTATGCCGCGACCAA GACCGCCCTGCATGCGTCCAGCG GCAACA CGCTGG-CGCA-GCAGTTCGACC TGGAATGCGCCTTGC  56 222
APT56_RS04775 NONE
APT56_RS04770 NONE
APT56_RS04765 1060005 .. 1060022 -  -3.3  -3.05844   TCGCGGAGCGGAACA             GCG-GGGC CGC GCCTACGC             CAGCCTTTCTTTCAG  43 20
APT56_RS04760 NONE
APT56_RS04755 1057955 .. 1057977 -  -4.8  -3.01791   ATGCGCTCGTCAACA          CGTCCCGCG CGTCGT CGCAGG-CG           GGCAGTGTCAGGATC  46 59
APT56_RS04735 NONE
APT56_RS04730 NONE
APT56_RS04725 1048985 .. 1048995 -  -5.4  -3.85817   ATTCTGTCTGATAAA                 TGAG ATC CTCA                 GTCATGTTGGCGGAG  60 23
APT56_RS04720 1047335 .. 1047354 - -16.4  -4.21098   ACAGGAACGCGAAAA            GGGCGCCG GTGA CGGCGCCC             TTTTTTATCCCCTGG 100 96
APT56_RS04705 NONE
APT56_RS04700 NONE
APT56_RS04695 NONE
APT56_RS04690 1040092 .. 1040125 -  -5.1  -3.10894   AGGAGGAGGAGGGAA     CAGCGGCGCGGGCGGC GTG GCCACTGGCGCCT-TG     CGCGGCGCGGGAGAC  47 107
APT56_RS04685 1039146 .. 1039162 -  -2.1  -2.68015   GGGAATCAGCAGAAG              CATGGTG TGT CTCCGTG              GGTGCTCATGCGAGG  38 97
APT56_RS04680 NONE
APT56_RS04675 1037431 .. 1037473 - -14.9  -3.28712   GGTCCGTCGTTAGAA GGGGGCT-TTCCCCGCCGGG CCGC CCCAAGGGGAAAGAGCCCCC TCGGGGGGCAGCTAG  83 151
APT56_RS04670 1036821 .. 1036856 - -16.9  -2.80354   GAGACCGATCCAAAG   CCG-GACGCGG-GCGCG GATC CGCGCACCGCGCCGCGG    GACGATCAGTCGTCC  84 31
APT56_RS04660 1032750 .. 1032764 -  -8.5  -3.64703   TCGCGCTGACCGAAA               GCGGC CACAC GCCGC               TGATCATGTCGCGCA  63 371
APT56_RS04650 1030252 .. 1030268 - -10.8  -4.43477   GCCATGCAAGCAAAA              GCCCGC GTCGA GCGGGC              TTTTTTTCGTCTTGA  88 99
APT56_RS04630 NONE
APT56_RS04625 1023479 .. 1023492 -  -9.5   -3.3247   AAGCGTCAGAGAATA               CCCGC TTAA GCGGG                TGCGATGGGCGCGCG  64 96
APT56_RS04620 1022671 .. 1022687 - -10.8  -5.86061   GCGCACGAAAAAAAA              CCCGCC TGTGG GGCGGG              TCCTGGGGCGAGGCC 100 45
APT56_RS04615 NONE
APT56_RS04610 NONE
APT56_RS04605 1019837 .. 1019888 - -10.7  -2.71364   GTACGCGGTCAAGCA GTAGCGC-CGGG-CG-CCGCGCCGTC CAT GCCGGGGCGGGCGGCCCGCGCGCGGC GCGGCGCCATTTTCC  59 422
APT56_RS04585 1017082 .. 1017100 -    -3  -3.51235   CTACATAGAGGACAA             GGAAGGGC ACC GCCATTAC             GAGGTGCGGCTGGCC  47 476
APT56_RS04565 NONE
APT56_RS04560 1012565 .. 1012586 - -11.5  -3.26471   CGACCTGGAGATGAA           GCGCGGCGT CATG ACGCCCCGC            GTGTTCGTGTTCGAC  66 380
APT56_RS04550 1008144 .. 1008154 -  -2.4  -3.63991   CACCATCCTGAACAA                 GCGC GAG GCGT                 TCCGCCGCGGTTTCG  50 505
APT56_RS04540 1006807 .. 1006822 -    -6  -3.02511   CCTACGGCGTCAAGA              GCGAGC TGGT GCGCGC               CTTCATCAAGGCCGG  48 470
APT56_RS04525 NONE
APT56_RS04520 1004212 .. 1004229 - -14.1  -5.75342   GGCGGCGAAAAAAAA             GCGCGCC GGCA GGCGCGC              TCGAGAGCGGAGGGA 100 57
APT56_RS04515 NONE
APT56_RS04510 NONE
APT56_RS04505 1000703 .. 1000747 -   -10   -3.1876   AAGCGTATTGACGAA GCCGCAGTATCGAACCTCAAC CATG GTTGAGG-TCAAGGCGGCGGC CGCCGCCATCACTGG  65 58
APT56_RS04500 1000147 .. 1000170 - -16.8  -4.61231   GCAGATGTGCAAAAA          GCCCCTGGTT GCAA AACCAGGGGC           TTTTTGTTTGTGGTG 100 94
APT56_RS04465  991242 ..  991261 -    -5  -3.75015   AGAAGCCCGAGGAAA            CG-CGTCAC GTG ATGACGGCG            GATGGCTATTTCCGC  58 449
APT56_RS04455  988472 ..  988484 -  -6.2  -2.71364   GGAGGGCGTGAAGCA                GGCG GTGCG CGCC                GGACTCGGCGTGGGC  46 231
APT56_RS04445  986510 ..  986537 - -25.6  -4.75372   ATTATGCAGGAAAAA        CGGGGCGCCGGC GCGG GCCGGCGCCCCG         TCGGCGCGCTTTATC 100 55
APT56_RS04440 NONE
APT56_RS04435  984454 ..  984490 - -10.9  -3.76835   TGTAAGAACAGAGAA    TGATGACAACTCCGTTA CTG TAACGGAGCCGCCGCCA    TCTTGACTGTCATGC  77 105
APT56_RS04430  983733 ..  983743 -  -8.2  -4.81249   GTGGAAACCGAAAAA                 GCGC TGC GCGC                 CCACGGCATTGACGA  87 166
APT56_RS04410  980614 ..  980633 -    -7  -3.14564   CTATGGCTGGATCAA            GGCCAGCC AGAA GGCCGGCT             ACGACAAGCGCTACT  53 315
APT56_RS04375  971712 ..  971751 -  -5.5  -3.62046   CCATGGCCTGAACAA  CCAGTTGGCGCGC-GCGC TGCTG GCGCAGCGTGACGCCTGG  GAACTGGTCAGCTAC  54 293
APT56_RS04290  950669 ..  950685 -  -4.3  -4.07568   CCTGGTGCGCGAAAA              CTTCCAG ATC CCGGACG              AGGTGCCGTTCGGCA  60 167
APT56_RS04275  947856 ..  947866 -  -2.4  -4.08767   TCCAGCGGCGCAAAA                 GCGC GGG GAGC                 GTGGCAGGCTATCTG  58 223
APT56_RS04230  937240 ..  937256 -  -9.4  -5.79526   ACAGGCGAAAAAAAA              CCTCGC GCAAG GCGAGG              TTTCAAGGCCGGCGC 100 77
APT56_RS04210  933592 ..  933602 -  -8.2  -2.72344   CGCCATGGCCAAGGA                 CGCC TCC GGCG                 GCGCCGGCTACAGCG  52 86
APT56_RS04185 NONE
APT56_RS04180  929328 ..  929345 - -14.1  -5.27335   GCGGCCAAAGAAAAA             CCCCCGG CAAG CCGGGGG              TTTGGGCGGGAGCGA 100 70
APT56_RS04175 NONE
APT56_RS04170  926587 ..  926604 - -14.1  -4.43879   ATGACGCAATGAAAA             GCGGCCC CTCG GGGCCGC              TTTTTTTGTCAGACG 100 46
APT56_RS04160  924634 ..  924653 -  -4.9  -3.01712   CGGCCGTGGTGAACA            CCTGGTC GAGGAA GACCTGG             TGCGGATGCTGGAAG  46 249
APT56_RS04125 NONE
APT56_RS04120 NONE
APT56_RS04115 NONE
APT56_RS04110 NONE
APT56_RS04105  914279 ..  914289 -    -4  -2.71011   ATCTCCTGTCAATCA                 TACA TTC TGTA                 CACAACGTCAATGAT  42 8
APT56_RS04100 NONE
APT56_RS04095  912336 ..  912375 - -16.4  -4.36914   TCCCGGGGGATAAAA  GCAAACGTCGGGACGGCC GGTT GACCGTCCCGACGCGTGG   TGGGGCACTTAACTA 100 51
APT56_RS04090 NONE
APT56_RS04085 NONE
APT56_RS04080  909738 ..  909758 -  -6.8  -3.55563   AGCGCAGCCTGGAAA           GCCCCGCAC CATG GCGCGGG-C            AGACGGACGCCGCCG  57 46
APT56_RS04070  907876 ..  907896 -  -8.2  -3.67976   CTCACCAACCTGAAA            CTGGCCGA GCAGG TCGGCCTG            TCGCCCACGCCCTGC  67 405
APT56_RS04060  906542 ..  906563 - -17.3  -3.61517   ATCGGCTCGGAACAA           GGGCCACCC GTGC GGGTGGCCC            TTTTTTCATGTCGGC  93 53
APT56_RS04035  900679 ..  900695 -  -2.2  -3.15354   GACTGGAAGGGAACA              GCGTCA TTTCT TGACTC              CAACGATCGCGCGGC  42 12
APT56_RS04030 NONE
APT56_RS04015  897860 ..  897879 -  -5.6  -2.81464   GCATGATGGATGAGA            CCCACGCC GACG AGCGTGGT             TGCGCCGCCAGCATA  47 66
APT56_RS04010  896770 ..  896791 -  -4.5  -3.14126   GGAGAAAGTCTAATA           TCTGCTAAA TATA TTTAGAAGA            TATTTTGATATGGGA  45 195
APT56_RS04005  895744 ..  895772 - -15.3  -2.71011   AGGCTGGCGCAAGGA       CGGCGCGCCACG GCCATG CG-GGCGCGCCG        GTCCTGCTTCGGGCT  75 48
APT56_RS04000 NONE
APT56_RS03995 NONE
APT56_RS03990  892922 ..  892952 - -31.2  -3.05596   CACGGGCGGATCGAA       CCGGCGCCGGGCGG GGG CCGCCCGGCGCCGG       GCGCCGTCATGACTT 100 32
APT56_RS03985 NONE
APT56_RS03980 NONE
APT56_RS03975  889843 ..  889857 -  -4.2  -4.56702   GGTCAATGAAACAAA               CGACCT CAG AGGTGG               GTCATGACGCAAGCC  71 495
APT56_RS03965  888738 ..  888749 -  -7.2  -2.82635   ACTGCCAGGACGACA                GCGC CATG GCGC                 GCCAGCGCCGCGCGG  50 168
APT56_RS03955  887087 ..  887107 -  -3.2  -2.52464   TGCTGGCCGAAGTGA           TC-GTCGCC GCCG GGCGCCAGA            AGTCGGACGAGCTGA  39 521
APT56_RS03940  884091 ..  884119 -  -8.7  -3.74224   GTGAAATCATGGAAA        CCTTCGCGTCCCG GCG CGGGACGCAGCGA        AGTCAGGCTGTCGGG  67 152
APT56_RS03935 NONE
APT56_RS03930  881366 ..  881392 -  -2.9  -3.41051   GGAGCGCCATCATAA        GCGCAAGCGCCG TCAG CGGGGTTTG-GC         ATTCTCCAGCGCGGC  47 11
APT56_RS03925 NONE
APT56_RS03920  880217 ..  880268 -  -2.9   -4.7657   CAAAAACGCCAAAAA CCCGAACGACAATGAAGCCAACC TTAGCC GGTTGGCTTTTTTGTTTTGCGCG CGCCCTTGATATGCC  75 362
APT56_RS03885 NONE
APT56_RS03880  871164 ..  871193 - -13.6  -4.36914   GTCTCGCGGACAAAA      CAGC-GCGGCGCCC GGGT GGGCGCCGCTGC-G       AAAGACGGATCGGCG 100 47
APT56_RS03875  870255 ..  870275 -  -6.7  -3.14132   CGCCGGGCGGATGAA            CCGCCTGGC GCG GGGAGGCGG            CCGGGCAGGGCGCCC  51 56
APT56_RS03865  868916 ..  868950 - -11.2  -5.45652   ACGGGCAAGAAAAAA     CCGCGGGGCAGGCGGC CTG GCCGCTTGCCCCGTCC     CGCGTCGCCGCGAGG 100 49
APT56_RS03845  865207 ..  865219 - -10.5  -3.20345   AAGGCCAGATCAACA                GCGGC AAC GCCGC                GGGTATCGAGGCGGA  60 320
APT56_RS03835  864506 ..  864516 -  -4.6  -2.52464   GCGCCGGTGAAGTCA                 CGCG GCG CGCA                 TCACGAGCGTCAGGC  43 12
APT56_RS03830  862849 ..  862864 - -11.8  -3.05844   GGCTGTACTTCAACA              GCGGCC TGCT GGCCGC               CGCCGCCGCGGTGCT  62 381
APT56_RS03820 NONE
APT56_RS03815  857356 ..  857378 -  -5.4  -2.60496   GCCGGCGGGAAACAG           GGCGCCACCA CCA CGGCATCGCC           GTCAGGCCGTCACTG  43 35
APT56_RS03810  856457 ..  856501 -  -7.8  -3.43676   TGTATTAAGCTACAA GTTACTACCGGCGTGCCGCGA ATTA TCGCAGCTTACCGGT-GTCAC AATATTTCGAAAATG  60 153
APT56_RS03805  855284 ..  855326 -  -8.5  -3.36273   GGTGCGCAAGAGCAA CATCAGCACCCTGGCCATCG TCGG CAATGACCAG-ACGCTGCTG ATCGGCGGCTACAAC  59 511
APT56_RS03685 NONE
APT56_RS03680 NONE
APT56_RS03675 NONE
APT56_RS03670 NONE
APT56_RS03665 NONE
APT56_RS03660 NONE
APT56_RS03655 NONE
APT56_RS03650  831763 ..  831775 - -10.5  -4.57073   GAGGCCTGGGAAAAA                CGCGC CGC GCGCG                CGGAACCGGGCGCGG  86 112
APT56_RS03640 NONE
APT56_RS03635  828343 ..  828391 - -10.2  -3.28712   CTGGCGCCGGGAGAA CGCCATTG-GCTCGGCTACGCGCG CTA CGCGC-TGGCCGCGCGCAGCAGCG GCGCGGACCGCCTGC  63 158
APT56_RS03620 NONE
APT56_RS03615  823079 ..  823129 - -16.1  -3.10012   AAGGTCATCAGCGAA CGCGCGGCGGCCGTCGGC-ATGCG CATG CGCATGGCCGATGACAACCGCTCG TTCAATACCTTCGAT  78 405
APT56_RS03600  820647 ..  820659 -  -4.7  -3.43961   CGACAAGACTGACAA                CGCGC CGT GCGCC                GAGGTGTTCATCGAG  52 237
APT56_RS03585  817957 ..  817976 -   -15  -4.56597   CGCCCGTGGCAAAAA            GGGGACGC AATC GCGTCCCC             TTTTTCTGGGGCCGC 100 365
APT56_RS03560 NONE
APT56_RS03555  808049 ..  808077 -  -7.4  -2.53382   ATGATCCGCAACTGA       CCGTACGCAGCGT CCAG ACGCCGCGC-CAG        CCGCGCCGGGCGGTG  48 525
APT56_RS03545  806623 ..  806633 -  -2.4  -2.73483   AGTGCACGGGAATCA                 TGGC CAT GCCG                 TCCTATTGCGCGTCG  38 28
APT56_RS03540  805340 ..  805359 -  -5.6  -3.73647   CGCATCGAGGAACAA            CTGCTGGCC AGC GGCCTGC-G            CGAAGTGGCCTCCGG  58 330
APT56_RS03525  802697 ..  802717 - -16.9  -4.72272   CGCGGTCAGCAAAAA            GGGCCGCAT TCG ATGCGGCCC            TTTTTTATTTCCGAC 100 65
APT56_RS03510  798991 ..  799019 - -16.8  -6.06723   TGCCTGAAAAAAAAA       GCGGCCCG-GCAT CGAG ATGCGCGGGCCGC        CTTGCGGGTGCGTCA 100 53
APT56_RS03505  797812 ..  797833 - -15.9  -5.24129   CCGGCCGATAAAAAA           GCCCTTCGG TTTC CCGAAGGGC            TTTTTGCTGGGCGCG 100 50
APT56_RS03440 NONE
APT56_RS03435  784949 ..  784965 -  -7.9   -4.0371   CACTTGGTATACAAA              GCAGGGG ATC CCCGTGC              GAACGGCCCGGCGAA  70 86
APT56_RS03430 NONE
APT56_RS03425 NONE
APT56_RS03420 NONE
APT56_RS03415  781264 ..  781280 -  -5.8  -3.04144   TCCGGATCCGGAAGA             CCCGACC ATGC GG-CGGG              TCTGGCTCAACCTGC  48 93
APT56_RS03405  777283 ..  777309 -   -15  -5.44119   GTGAGGCGAAAAAAA         GCCCCGAACGGC CAG GCCGGGCGGGGC         TTTTTCGTGGACGGA 100 48
APT56_RS03385 NONE
APT56_RS03380  772013 ..  772029 -    -5  -4.56597   CGGGGTCGCCAAAAA              GCGGCC GCGCG GGCGGC              CTTTTTTGGCATTTG  74 252
APT56_RS03370  767555 ..  767582 - -22.8  -2.67803   TTGTTACTAAATGCA        CTGGGCGCGCCT AGCA AGGCGCGCCCAG         GAGAATGCCGCTCAG 100 50
APT56_RS03365 NONE
APT56_RS03360  762845 ..  762884 -  -9.9  -3.80625   GTCCCAGAACTTAAA  CCCGTGCCCCGATCCGCC AACAA GGCGAACCGTGCC-CGGG  CTATTCATCGGCGCA  71 293
APT56_RS03350  761409 ..  761434 - -15.5  -3.74224   GGGAAACCATGGAAA         CGGCCCGGGCAA GGC TTGCC-GGGCCG         TCGTCGTTTTCAGAC  90 35
APT56_RS03280 NONE
APT56_RS03275 NONE
APT56_RS03270  745222 ..  745272 - -13.9   -3.1352   CGCCAAGCCAAGACA CCG-CGTAAGTTGCGGGCGGCCGC CCGC GCGGCCACCCGCAACGGGCATCAG CAATCTCGTGAAGTT  76 304
APT56_RS03265 NONE
APT56_RS03260 NONE
APT56_RS03255  739921 ..  739931 -  -8.2  -2.88544   TGTTATCTCGATAGA                 CGCG GGT CGCG                 CCCACTGGCCATGAA  55 138
APT56_RS03250 NONE
APT56_RS03245 NONE
APT56_RS03240 NONE
        aroE NONE
APT56_RS03230  734448 ..  734472 -    -2  -4.23104   TGAAAGCTTAACAAA         TC-CGGCCGTC CAGG GTGGGCCGTGA          CCTGTCGAAGCCGCC  63 51
APT56_RS03225 NONE
APT56_RS03220  732071 ..  732106 - -22.6  -2.93382   TTTCAGATGCACAGA    CGCCCATCGTGGCCGC CCGC GCGGCCGCGATGGGCA     GCCCCGCAAATTCCC 100 317
APT56_RS03210 NONE
APT56_RS03205  728409 ..  728425 -    -5  -3.12351   GGCCGCCAGATTCAA              GCCAGC CGGCC GCAGGC              TTCGGCGATGCGGCG  47 5
APT56_RS03200 NONE
APT56_RS03195  726789 ..  726803 -    -7  -2.54634   TCCCACATGATCAAT               GGCCTC CCA GGGGCC               GGTAGCGCCGCTGCA  47 6
APT56_RS03190 NONE
APT56_RS03185  725022 ..  725037 - -11.8   -4.1466   ACGTAAGCCGCAAAA              GGCCGC TCGC GCGGCC               GGCTTGCGGCGGGCC  85 331
APT56_RS03150 NONE
APT56_RS03145 NONE
APT56_RS03140  716989 ..  717021 - -19.9  -3.32844   GGGCGGATGCCACAA      CGCCCTGGCAGCC GCTGTCG GGCCGCCAGGGCG      TTGTGGGGCGAGCGC 100 65
APT56_RS03130  714082 ..  714118 -  -4.2  -3.33696   GCCTGGTTCAAGCAA   CTGGCGCCCTGAGGCGG ACTG CCGGC-CACGGCGGCGG    CGGGGCCGCGTGGCG  49 116
APT56_RS03095  706575 ..  706588 -  -5.2  -2.56095   TGGAGATTGAAGTTA               CGGC GGTGGT GCCG                GCTTGATGGTGGGCC  43 511
APT56_RS03005  685413 ..  685431 -  -5.3  -2.74563   GGGATACCGGAATCA            TGGCGGCA ATTA TGC-GCCA             AACCGCCGTCGTTTT  44 126
APT56_RS03000  684282 ..  684304 -  -7.6  -3.69323   TGAGCAGGACGGAAA           TCGCCGCC AGGGCAA GGCGGCGC           GCGGGGGAAAGCTTC  65 94
        argJ  682739 ..  682779 - -16.3  -3.03124   TGTGATCCTGGAAGA GCGAACG-G--GCGGGCCCG GCAC CGGGCCCGCGTCGCGTTCGC GGGCATCGTCGGAAG  85 270
APT56_RS02990 NONE
APT56_RS02985  680835 ..  680851 - -15.1   -5.9873   CTAGGACAAAAAAAA              CCGGCGC GGC GCGCCGG              TCGGGAGGGCGGGCG 100 74
APT56_RS02980 NONE
APT56_RS02975 NONE
APT56_RS02970 NONE
APT56_RS02965 NONE
APT56_RS02960 NONE
APT56_RS02955 NONE
APT56_RS02950 NONE
APT56_RS02945  671703 ..  671759 -  -9.3  -3.14344   GAGCCGCGGCATCAA GGCGGATTGA-GGCGGCGAGGGC-GGCC CGGG GGCCTGCCCG-GCCGCGATCCTCCCGCC GGCGCCGGCCTGAAG  60 70
APT56_RS02900  657945 ..  657981 - -20.2  -2.90496   GGGCGGCGGAAAGCA    CAAGGGCCTGGCGGAC GCGGT GTCCGGCAGGCCCTCG    GGGCGGTGGGCGGTC 100 75
APT56_RS02875 NONE
        glpK NONE
APT56_RS02855 NONE
APT56_RS02850 NONE
APT56_RS02845 NONE
APT56_RS02840 NONE
APT56_RS02835  646606 ..  646631 - -11.1  -3.71649   TTGCGAAATGCGAAA         TG-CCGGGCGGC GAG GCCGCCCGTTCA         CAGGCCTGCTTATTG  77 35
APT56_RS02830 NONE
APT56_RS02825 NONE
APT56_RS02820 NONE
APT56_RS02815  641904 ..  641961 -  -9.8  -3.14132   GGCTCCGCTGATCAA GGACGGCAAGGTCAAGGCGCT-GGCCGT GACC ACGGCCAAGCGC-TCGTCGCTGCTGGCC GACGTGCCGACGGTG  60 421
APT56_RS02785 NONE
APT56_RS02780  634758 ..  634772 -  -5.6  -3.64703   CGGTCTTCAGGGAAA               TCGGAC GAA GACCGA               TGCCTTTCAGAAGCG  57 32
APT56_RS02775  633411 ..  633437 -  -9.2  -3.53811   CGGATTTCGTGGAAA         GCGCCCGGGTGG ATG CGGCCCGCGCGC         GGCTGGAGCGCGCCT  63 176
APT56_RS02765  631261 ..  631279 - -10.2  -3.14132   GCTGGCGCGCATGAA             GCGCCTGC GCG GCACGCGC             TTCGATCCGTTCGGC  60 383
APT56_RS02755  626600 ..  626618 -  -7.3  -3.53012   TGCGGGGTCGCCAAA             GGCGGCC GCGCG GGCGGCC             TTCTTTGGCGTTTGG  60 92
APT56_RS02745  623691 ..  623724 - -19.5  -2.62184   GGGCGCGCGAGATGA     CGGCCCTGACCGCCG TGTT CGGCGACCTGGGCCG      CGACGAGCGTTTCGT  82 151
APT56_RS02690 NONE
APT56_RS02685  607482 ..  607503 - -10.1   -4.0616   TAGGCGAATCATAAA           GCAC-GGCGC GGC GCGCCTGCGC           GAAAGGCCACGTTGG  78 224
APT56_RS02680 NONE
APT56_RS02675  605507 ..  605520 -  -2.3  -5.14965   ACGGTCAGGAAAAAA               GCGGA GGAA TCAGC                CGACCATTGTACCGA  83 239
APT56_RS02670  604747 ..  604758 -  -7.2  -2.54896   GCTCCAGGGAATCCA                GGGC GGGA GCCC                 GTGTGGCCGGGCGGG  47 77
APT56_RS02665  603253 ..  603300 -  -6.1  -4.24948   CTACGACATGGAAAA GCTGCC-CGAGACCG-CCCTGGT CAAG ACCTGGGGCGGCCGCGCGGTGGC CATTCCGTTCGAGTT  72 102
APT56_RS02630 NONE
APT56_RS02625  595142 ..  595171 - -13.5  -2.64274   ATGGCGGGAAATTTA       CCATCCGCGCCGC GATG GCGGCGCGGATCC        CGTGCGTGGCGTGAC  67 47
APT56_RS02620 NONE
APT56_RS02615  593017 ..  593030 -  -9.5  -4.26903   GGCACTTTAGGAAAA               CCGGG GTGA CCCGG                TTCTGTCGCGAAGAT  81 40
APT56_RS02610 NONE
APT56_RS02605 NONE
APT56_RS02600 NONE
APT56_RS02595  589225 ..  589272 -  -9.1  -3.14132   CCTGGTGGGGATGAA TTGTTTCAGGCGGGTGGCCGGG GCTCG CCCGGCCA-CGGCCTTCAACGA TACGCCTGGAACACC  60 19
APT56_RS02590  587841 ..  587863 - -16.4   -4.3208   CCCTACAATGCAAAA           CACCCGATGA AGT TCATCGGGTG           CTCAGTCCGTAATCG 100 94
APT56_RS02570  584915 ..  584931 -  -4.3  -3.61398   CCTGTTCCTGAAGAA              GCAGCGC ATC ACGGTGC              ACGAGGCGGTGGAGC  51 307
APT56_RS02560 NONE
APT56_RS02555 NONE
APT56_RS02550 NONE
APT56_RS02545  581100 ..  581140 - -16.8  -2.77182   CTGCACAGTGAAGCA CGACGG-TCCGCCACCCGC GTCC GCGGATGGCGGCGCCGACG  GGTTTCAGGCGTGCG  81 30
APT56_RS02530  577993 ..  578014 -  -3.6  -3.61398   CGGCGCGGTCAACAA           GGTCATGG GCATGG CCGCGACC            GTGGTGGGGGCGCTG  51 498
APT56_RS02505 NONE
APT56_RS02500  572481 ..  572508 -  -5.4  -2.70932   GCGGTGTTGCAAGGA        CTGCGATTGCGGC AGG GCCGCCGCCGC-G        ACCGTCCCGCGCGCG  44 80
APT56_RS02495 NONE
APT56_RS02490  570259 ..  570273 -  -2.8  -2.87344   GAGTTCGTCCAGATA               GATGTG AGC CATATC               CTTCCTGTCAGCGAG  41 53
APT56_RS02485  568760 ..  568776 - -10.1  -3.54459   TGAAGTCCTCGGAAA              CGACGCC TAC AGCGTCG              GGGTCTGGGACCCCG  67 512
APT56_RS02465  562222 ..  562257 -  -3.8  -3.05844   CGCTGTACGTGAACA    TGCAGGCGCCGCCGCCC AAC GAGTGGCCGC-CCTACG    GGCAGGACATCGACG  43 185
APT56_RS02455 NONE
APT56_RS02450 NONE
APT56_RS02445  558455 ..  558475 -    -6  -2.52464   GTGTGCTGGAAGTGA            CCGACGCC GTGGT GGCGCCGT            CGATGGACGTGAGCT  44 319
APT56_RS02375  545378 ..  545388 -  -2.4  -5.08169   ACAGACGCGAAAAAA                 GCGG CCA CCTC                 CCTAGCTCCACTCTC  79 154
APT56_RS02345  538379 ..  538400 - -15.9  -5.27335   GGCCCCAAACAAAAA           GCCCCTCGA TGCA TCGAGGGGC            TTTTTTTCGACCGGC 100 69
APT56_RS02320 NONE
APT56_RS02315  531140 ..  531194 - -17.2  -2.82623   CCCTTCTGACAAGGA CGGCT-GCC-GGCC-GCGTCCGGCCCCG CGC CGGGGCGGG-CTCTGGCCAGGCGAGCCG GCCCAGGCGTCGCAT  87 81
APT56_RS02305  529245 ..  529263 -  -2.5  -2.90496   TCTTGGGGTAAACCA            TTATAGGG ATAA CCCTA-AA             TCAAAAGCAACGCGT  40 92
APT56_RS02300  528726 ..  528784 - -38.4  -2.60032   GCCGTGCGAAAAATG CCGATCGCCCCAGTTCGAGGCGGTCCCG CTT CGGGACGGCTTCGAACTGGGGCGATCGA GTATTGCGTCGTGGA 100 216
APT56_RS02295  526838 ..  526857 -   -15  -5.81412   CTCATCCAAAAAAAA            CGGCTGCC CGAA GGCAGCCG             TTTTCATGTCGCGCG 100 48
APT56_RS02285 NONE
APT56_RS02280  523215 ..  523242 - -15.5  -2.62184   GGTTTTTTTATATGA        GGCGGCGCGCC ATCAAG GGCGCGCCGCG         CGATGCATCAGACGA  77 33
APT56_RS02275  521551 ..  521565 -  -3.4  -2.73364   CGGCGATCTTAATTA               GCGGGC TTG GCCGAC               ATGGCCAGGGTGTAT  40 4
APT56_RS02270 NONE
APT56_RS02265 NONE
APT56_RS02260 NONE
APT56_RS02255 NONE
APT56_RS02250 NONE
APT56_RS02245  515306 ..  515334 -  -6.5  -3.28712   GTTCGTGCCGGAGAA        GTACTAGGCGGGC GCT GCCCGCGCTGTGC        AACGCGCGGGCACGT  54 88
APT56_RS02235  513023 ..  513041 -  -4.4  -3.72576   TGTTCCGCCAGGAAA             CGGGCCAG TCT CCGGCCAA             GGCGGTGGAACATCT  55 241
APT56_RS02225  510808 ..  510839 -  -4.4  -3.74693   CGCCAGCCCAGGAAA      CCAACTGCCAT-CCG TTC CGCCACGGCAACTGG      CTGTTCGTGCACAAC  55 508
APT56_RS02215  509307 ..  509336 -  -6.4  -3.14132   GGCGCGCCGGAGGAA      CG-GCGCGGGT-CG TTAT CGCACCAGCGCGCG       CAACGCCGCCAGGAA  51 8
APT56_RS02130  488850 ..  488884 - -16.5  -3.28979   CAAGACACAACGTAA    GCCGCAAAA-GGCCGC CCGC GCGGCCGCCTTGCGGC     GGGCCCCGCAAGACC  89 348
APT56_RS02100  483015 ..  483031 -  -2.2  -3.22884   CGACCAACTCATGAA              GAAGGA GATCA TCCTGC              AGGGCCTGGGCTGGG  43 314
APT56_RS02090  480959 ..  480997 -  -7.2  -3.33696   CGCGCCGGCAAGGAA   GGCGTGCGCATCGGCCCG TAC CAGGTCGATCCGGCCACC   CGCAGCGTCGACGGC  55 408
APT56_RS02080 NONE
APT56_RS02075  478785 ..  478826 -  -9.9  -4.25104   GCTCGGCGATGAAAA GGCCCCGGCGCTTCGTCCC TCGC GGGTCGGAAGATCGGGGCC  TTTTGCTGTCCGCGC  81 60
APT56_RS02045 NONE
APT56_RS02040  472151 ..  472177 - -10.1  -5.24796   GGCACACAACAAAAA        GCCCGG-TCCAG GTTA CTGGTTCCGGGC         TTGGCTCTGTGTTCT 100 221
APT56_RS02035 NONE
APT56_RS02030 NONE
        trpD NONE
        trpC  468039 ..  468060 - -10.9  -3.68836   ACACGCATGCAACAA           CACGCATGC ATGA GCATGCATG            AACATGCAAGGACGC  77 90
APT56_RS02010  464362 ..  464375 -  -3.8  -4.30719   GTGGGTCAGAAGAAA               CCCA GTTTCT TGGG                CGAGTAGCTCACCAG  66 2
APT56_RS02005  463702 ..  463717 -  -3.2   -4.8622   TCCCGCAATGAAAAA              CAGCAG CAGT CCGCTA               CGCGGCGCACCCATG  78 194
APT56_RS01990  461581 ..  461597 -    -5  -4.07568   CGGTCGGTCCGAAAA              CCTCGG CACAC CCGTGG              GGCGTGGCGTTTATC  64 36
APT56_RS01985  458827 ..  458860 -  -2.3  -3.37796   CGTGATGATCGACAA     CACCACC-CGCCTGAA TCG TCCGGGCGCGGCATTG     GCCGCGATGGACGGC  45 485
APT56_RS01975 NONE
APT56_RS01970  456418 ..  456434 -  -2.1  -3.14132   CGCGCCGCTGATCAA              GCGCGCA ACA TCCGCGT              GACGACGCTGCTGAC  42 5
APT56_RS01920  444066 ..  444082 -  -2.2   -4.3739   TACTCGGCGACAAAA              CGCC TATGGTAGT GGCG              AAACCCTGTCATGGC  65 60
APT56_RS01915  443370 ..  443406 - -19.3  -3.40611   CTCATCGCAAGAATA    GCCGCCCGCCCGCCGGG CCG CCCCAAGGGCGGGCAGC    CCCCTCGGGGGGCAG 100 161
APT56_RS01825 NONE
APT56_RS01820 NONE
APT56_RS01815 NONE
APT56_RS01810 NONE
APT56_RS01805  419484 ..  419498 -  -2.7  -3.80855   TTTGGGAAAAAGGAA               CGTCC AGCAA GGGCG               AATTCAGTATAGGCC  53 105
APT56_RS01800  418648 ..  418661 -  -2.3  -2.57132   TCGCTGCTGGACAAC               GACGA CTGC CCGCC                CGTGACGCTCTACTG  38 384
APT56_RS01775 NONE
APT56_RS01770  412280 ..  412292 -  -7.7  -3.28924   CAGCGCGCCCGAGAA                CAGCA ACC TGCTG                CGGGTGTCGCTGAAG  55 321
APT56_RS01745  410080 ..  410100 -  -4.6  -3.65314   GGCAACCTTCAACAA           GCG-GGCAG GCCA CGGCCACGC            GGCCAGGCACTGGCC  55 160
APT56_RS01735 NONE
APT56_RS01730  407717 ..  407733 -  -5.7  -2.63102   ATCACCCGGACAGGA              CGGGCGG GGG CCGTCCA              ATGGTACGCCTATTG  45 108
APT56_RS01725 NONE
APT56_RS01720  403705 ..  403744 -  -2.1  -3.36273   GGCGCGCAAGATGAA GCAC-GC-GACCGCCG-CCG ACA CGGTCGGCTACCAGCTGTAC CAGGATGCCAACTAC  45 189
APT56_RS01695  397367 ..  397378 -  -3.6  -3.37796   GCCCATGATTTATAA                CGCC ACAA AGCG                 CAATAAATGCCGAGA  47 43
APT56_RS01690 NONE
APT56_RS01650 NONE
APT56_RS01645  384965 ..  384992 - -25.6  -4.93877   TGTCATGAAAGAAAA        CGGGCCCGGCGC ATGC GCGCCGGGCCCG         CGGGAACCTCAGCCG 100 46
APT56_RS01640  382684 ..  382714 -    -9   -3.1505   ACGACGCGCGAGGAA      GTGCGCGCC-GAC GTCGAG GTCTGGCGCGCAT       CCGGCATGGCGCAGC  56 231
APT56_RS01615 NONE
APT56_RS01610 NONE
APT56_RS01605 NONE
APT56_RS01600 NONE
APT56_RS01595  371233 ..  371252 -    -7  -3.04263   ATGCCACCGCCAACA            CGGCGCAC GCGG GCGCGCAG             ATCCTGTTCGAGATC  52 61
APT56_RS01580  367688 ..  367698 -  -2.4  -2.65815   GGCACAGGTATATCA                 CGGC GTG GCCT                 CGGGCGTAGTCAGCA  38 12
APT56_RS01575  366768 ..  366780 -  -3.3  -3.92373   GATTCTAGCGAGAAA                TCCCC GAC GGGCA                ATGCCCGGTCTCAGC  56 36
APT56_RS01570 NONE
APT56_RS01565  362963 ..  362974 -  -7.2   -2.5655   GGCATGCACATCAAT                GCCG TGGG CGGC                 GATTGTCCCGGCAAG  48 428
APT56_RS01550  359624 ..  359668 -    -6  -5.41143   TATGGGGCAAAAAAA GAGCCGATCCA-TTTATGCT TTTATTG AGCATAAAGCAGATCGGC-C GGATTTTCATCCCTG  93 188
APT56_RS01545 NONE
APT56_RS01540  356665 ..  356718 -  -4.6  -3.40052   ACATGTTCAACAACA TCATGGCGT-ACCAGCTGGACAGC GGCGCCGA GCTGGCC-GCCGGCCACACCATGC AGATCGGCGAGGCCC  52 134
APT56_RS01525 NONE
APT56_RS01520  352811 ..  352829 -    -3  -3.21747   CGAGCGGACGATCAA             GCGGCC TCTGGTC GGCTGC             GATACCTGTGGAAGC  43 414
APT56_RS01495  347790 ..  347841 -  -5.9  -3.04322   GGGAATGGGCGAAGA GGTGGCGGTCATAGT-CTGCTCGTT CAGT AACG-GCAGCACTATGCCCGCGGGC GCGCGGCCCTGTCTT  48 51
APT56_RS01490  346679 ..  346698 -  -3.5   -4.4078   CGCCTCGAAGGAAAA            CGCGC TGTTCCTGGG GCGCG             GCATGCATTACCCGA  70 517
APT56_RS01480  344406 ..  344425 -  -4.8  -3.90112   GCGGCTTGAAGGAAA            GCCTGGCC GACG GGCGCGGC             GTGCTGTGCGCGGTG  60 236
APT56_RS01445  337415 ..  337429 - -12.8  -2.72379   TCAAGGGCTGAACCA               GCGGCC GGG GGCCGC               GCCCGGCGCGGTTTT  68 40
APT56_RS01415  332646 ..  332683 -  -8.4  -3.28712   CGCGCTGCGCGAGAA   CCATCGCGGCAAGACCA TGTTC TGG-CTGGCCGCCACGG   TCATCCTGGGTTTCA  59 472
APT56_RS01390  327598 ..  327619 - -10.1  -3.54129   CACAGCCGGCCGAAA           CGCCGTCGGC CAC GCCG-CGGCA           GGTCGAGACGCGCCA  67 109
APT56_RS01380  323541 ..  323560 - -16.4  -3.71527   CCGCAAGCATGCAAA            GGGCCGCG AATT CGCGGCCC             TTTTTCTTGCGACGG  91 309
APT56_RS01360  319732 ..  319745 -  -9.5   -4.7254   AGCGGGCATGAAAAA               GCGCC CGAA GGCGC                TCTGTCAGGAAGTGG  91 30
APT56_RS01355 NONE
        gltD  313101 ..  313135 - -24.4  -3.90744   GGCTGGCTGAAAGAA     TTTCGCCGCCGGGCAC GAC GTGCCGGGCGGCGAAA     GCGGGGGCCGGTCGG 100 66
APT56_RS01345 NONE
APT56_RS01340  311688 ..  311732 -  -9.1  -3.14132   CTGGCGGTGGACGAA GCCGCGCCGACGCCAGGCG GGGGCAG CGCCTACAACCGCCGCGGC CTGGGCGCCTGGTTC  56 225
APT56_RS01305  304886 ..  304898 -  -4.7  -3.15544   CTTGACGTGTATCAA                GCGGC AAC GCGGC                GCGTGGTAGCGGCGC  47 63
APT56_RS01300  304098 ..  304114 - -13.7  -3.78775   GCGCGGATGACGAAA              CGCCTGC ATT GCAGGCG              TTGCGGCAGCTACTG  82 76
APT56_RS01290 NONE
APT56_RS01285 NONE
APT56_RS01280  299869 ..  299885 -  -7.9  -3.61398   CGCCTGGGGGAACAA              TCCGGGG ATG CTCCGGA              TCCTCCCCGGGAAGG  63 48
APT56_RS01275 NONE
APT56_RS01270 NONE
APT56_RS01265 NONE
APT56_RS01260  296562 ..  296582 -  -5.3  -5.42198   GGGGAAAAAAGAAAA            CCGCATGGA AAC TCCTTGCTG            TACTGAAAACGCAAT  93 49
APT56_RS01255  295886 ..  295916 - -17.5  -3.18031   TCCCCAAAAATGACA       GGCCCGGCGGACC GCAGG GGCGCGCCGGGCC       GGGACAAGCCGGACG  91 47
APT56_RS01250 NONE
APT56_RS01245 NONE
APT56_RS01240 NONE
APT56_RS01235 NONE
        hisG NONE
APT56_RS01225 NONE
APT56_RS01220 NONE
APT56_RS01215 NONE
        hisH NONE
APT56_RS01205 NONE
APT56_RS01200 NONE
        hisI NONE
APT56_RS01190 NONE
APT56_RS01185 NONE
APT56_RS01180 NONE
APT56_RS01175 NONE
APT56_RS01170  283771 ..  283791 - -15.4  -3.52652   TTTATGCAATGACAA            CGGGGCCC GCAAG GGGCCCCG            TCAGGGTCGGCAGCG  90 46
APT56_RS01165  282946 ..  282968 -  -6.1  -3.05521   ACGAGATCGTCAAGA           CCGGCGGCG TCAAG CGCGGCTGG           CTGGGGGTGGAGCCG  48 371
APT56_RS01155  281139 ..  281158 -   -15  -4.07568   TGTTGCCCGCCAAAA            CCGGCTGC GCGG GCAGCCGG             TTTTGGCATACGTGC  95 179
APT56_RS01145  279549 ..  279568 -  -5.6  -5.03145   TAATTCGGGAAAAAA            GCGCGACG CGAG CGTCAGGC             CTTGTTGTCTTCATC  87 20
APT56_RS01140 NONE
APT56_RS01135  277096 ..  277126 - -13.3  -4.35327   TTATGAAAAACGAAA       GGCCAGCGCCC TAATCTAGC AGGCGCTGGCC       CCGATTGCCAGGCGG  95 120
APT56_RS01130 NONE
APT56_RS01125  275888 ..  275905 - -12.7    -4.258   TGAGGGACGAAGAAA             CGCCCCT CGGG AGGGGCG              TGCAAGATCGGCCAG  95 120
APT56_RS01120  274690 ..  274738 -  -4.9  -3.55444   GTTCCAGGTTTCAAA GCCACCGCGTCGGGTCCGCTCCG ACC CGGATCCGCGGCCACGAGGCGGC TATGGCGCGGGGTTG  53 25
APT56_RS01115  273805 ..  273832 -    -4  -3.14344   GAGCTGCTCTACCAA        CTGAGCTACACCG GCA CGGCGC-GCCCGG        GGGGCACGCGCAGGG  45 110
APT56_RS01110  273595 ..  273628 -  -3.8  -3.51924   GCGGGACCGAGACAA     GTATAGCCACGCCGG ACTGG CCGG-ATGGCCGCAC     TTTCATCGAATCGAT  51 141
APT56_RS01105 NONE
APT56_RS01100  272341 ..  272354 -  -9.5  -5.58209   GGAAACGCAAAAAAA               CGGCC GAAT GGCCG                TTTTTTTTGTCGGCT 100 83
APT56_RS01090  270622 ..  270644 - -19.2   -4.2349   GCCCCAGATGCAAAA           GGCCCGCAAC CAG GTTGCGGGCC           TTTCAGTACTGCATT 100 44
APT56_RS01085  270005 ..  270019 -  -3.4  -3.55444   GCGGGAGGCCTGAAA               CCGGGG GAG CCCCCA               TTCTCGCAAATCAGG  49 59
APT56_RS01080 NONE
APT56_RS01075  268461 ..  268488 -    -9  -3.16564   TGGCGATTCCAGGAA        GGGCGCGCCGGGC GTG GCCCGGCGC-CAG        AGGGGCATCAGGCGG  57 33
APT56_RS01070  266837 ..  266893 -  -8.6  -3.04144   TTTCCACCGGCAACA TGCTGTCGTCGCTGCAGCAGCGCGCCGG CAT CCGGC-CGCTGACGG-GCAACGCCTACA GCATGCTGTACGGTG  55 370
APT56_RS01060 NONE
APT56_RS01055 NONE
APT56_RS01050  262176 ..  262191 -  -6.8  -2.63079   GCGCGACAGAAGTGA              TAGGGC CCTG GCCCCA               CGGGGAGCCGGGGCA  47 239
APT56_RS01045  260481 ..  260522 - -22.4  -3.72576   GGGGGTCGCATCAAA CAC-GGCGCCGCG-CACGCC CTGC GGCGTGGCGCGGCGCCCGCG GACTACGGCAGGACC 100 28
APT56_RS01040 NONE
APT56_RS01035 NONE
APT56_RS01030 NONE
APT56_RS01025  255177 ..  255192 -  -2.4  -3.90112   CGGTCGTCAAGGAAA              CCGTGC GCAA GCTCGA               TGCGCGGATGTCGGT  56 318
APT56_RS01010  250600 ..  250610 -  -8.2  -2.63102   ATTACTTGGAGAGCA                 GCGC CGC GCGC                 GGGCCGCCGGCCGGG  53 1
APT56_RS01005  249867 ..  249900 - -27.5  -3.96216   CGTGCATCGAAACAA     GCGGGGCACGCGCCG TTGC CGGCGCATGCCCCGC      GCGTGGAAATTCAGG 100 36
        prfC NONE
APT56_RS00995  247406 ..  247425 -   -15  -4.25104   GGCCCGGCATGAAAA            TGGCGCCC CTCG GGGCGCCA             TTTCTTTTGGTGACC 100 69
APT56_RS00980  244058 ..  244069 -  -5.8  -4.69664   CAGATCATGGAAAAA                CTGG CCGA CCAG                 GGCATCGTCATCGCC  82 493
APT56_RS00965  242045 ..  242066 - -17.3  -4.46112   GGGGACTGAAACAAA           CAGGCCGCC TGAC GGCGGCCTG            CAAGGATCGGACGAA 100 57
APT56_RS00960  240765 ..  240788 - -19.6  -5.28826   AAAGCCGATAAAAAA          GCCGGGGACG GATC CGTCCCCGGC           GTGTTCGGCGCCTGC 100 161
APT56_RS00955  238596 ..  238616 - -11.1  -4.67697   GCGCAAAAGAAGAAA            GCCCGCC GGATAAA GGCGGGC            TTTGTTTGTGCGGAG  93 111
APT56_RS00945  235879 ..  235906 -  -8.2  -3.14211   ATTTTTGTGGATGAA        GTTCAGCGGCGC ACCG GCGCCGCGGTGC         CGCCCACCACGATGC  57 0
APT56_RS00940 NONE
APT56_RS00935 NONE
APT56_RS00930  232552 ..  232562 -  -6.8  -3.15663   ATTTACTTGTAGGAA                 CGCA GTA TGCG                 GTCGGCTTCGCGCTG  51 2
APT56_RS00925 NONE
APT56_RS00920  230812 ..  230832 - -18.3   -4.4078   CTGGGCCAACGAAAA            GACCCCGCG CTG CGCGGGGTC            TTTTGCTTTCCAGGG 100 46
        argS NONE
APT56_RS00900  227261 ..  227271 -  -8.2  -3.00766   AAGAGGTTACAGACA                 GGGC CAG GCCC                 GGATTAGTTCAATCA  56 64
APT56_RS00895  226539 ..  226563 -   -15   -4.7373   TGACCCCATGAAAAA         CGCCCCG-GCC GGTC GGCGCGGGGCG          TCGTCATGAACGCGA 100 53
APT56_RS00890 NONE
APT56_RS00885  224153 ..  224165 -  -4.7  -4.08216   CCAGGCGCTGGAAAA                GGCCG CGG CGGTC                AAGGGCTGACCCGGG  64 139
APT56_RS00870  221346 ..  221373 -  -3.2  -3.17723   GTATTTCGAAGGCAA        GCTGACGCGCGGC ACA GGCGCG-GACGGC        ATCGTGCGCTTCAAG  45 150
APT56_RS00860 NONE
APT56_RS00855  219352 ..  219372 -  -3.1  -5.02074   GCAGTGGCGAAAAAA            TCATGACGC TTC GCGTCGCGG            GAACACAAGCGCCAT  81 183
APT56_RS00835 NONE
APT56_RS00830 NONE
APT56_RS00825  211005 ..  211025 -  -2.4  -4.07568   TCGCCTTGCGGAAAA            GGCGCAGC GAAAT GATGCCCC            TCGGTGTACCCGCCA  58 122
APT56_RS00820 NONE
APT56_RS00815  206944 ..  206980 -  -9.3  -3.89346   TGCGCATTCTATAAA    CAGCCGGCTGACGCC AAACTAA AGCGCCCGCCGACCG    TGGGGTCTTGCGCGC  73 59
APT56_RS00810  205378 ..  205398 -  -3.9  -3.29263   ACAGTCGTTGCAGAA            TGGCATGCA GGC CACTTGCCA            ACTGGTGTCGCACGG  47 283
APT56_RS00795  201967 ..  201993 -    -2  -3.34398   GCGTGGCGGCAAACA         GGCCGGCGAGCG TGG CGCGCAGCAGCG         GGCGGGGGGACGGGC  45 308
APT56_RS00790 NONE
APT56_RS00785 NONE
APT56_RS00780 NONE
APT56_RS00775 NONE
APT56_RS00770  198396 ..  198419 -  -2.3  -4.14392   GGCCAAGCGCGAAAA          GCCGCGC AGCCGGGTGG GCGCGGT           GGTGATCGTGGCGTT  61 100
APT56_RS00760  197087 ..  197098 -  -2.2  -3.27185   TTTATTCAAAGAAAG                CCAC TTTG ATGG                 GGTGGAGTTTTCTTT  44 242
APT56_RS00745  184662 ..  184674 -  -4.7   -3.4052   GGTGAAGGCAATGAA                GCGGG CCG CGCGC                GGTTGTTGCCAGTGG  52 128
APT56_RS00730  182801 ..  182827 - -15.8  -3.60925   CCCGAAAAAGACCAA         CGGCCTGCCGCG CAA CGCGTCAGGCCA         GTTCCAGGCCACCAA  90 89
APT56_RS00695  166179 ..  166204 - -13.3  -3.21218   ACGCTTCATGAGGAA         CTCTCCAGGGCG CGC CGCCCCGG-GAG         TGGGGTCGAGCGTTG  74 241
APT56_RS00690  165370 ..  165383 -  -5.9  -2.53905   TGATAAGCCATGAAC               CGCGC TCCG ACGCG                CCCGCCTTACAGGTC  45 32
APT56_RS00685 NONE
APT56_RS00680 NONE
APT56_RS00675  163121 ..  163157 - -15.2  -3.20941   CATCAACGACGAACA   CGGCGTGGTGCGCGT-GG CGC CCGACGCGCAGC-CGCCG   GCGCTGGGCGACACG  77 194
APT56_RS00665  160920 ..  160938 - -17.4  -3.06261   GGTGAATCGCGAACA             GGGCCGCC CGA GGCGGCCC             TGTGCAAGCGCGGCG  88 80
APT56_RS00660 NONE
APT56_RS00655  158148 ..  158165 - -14.1  -3.25823   TCGCGGGGATACGAA             CGCCGGC CGGA GCCGGCG              CCGTCAGTGCAGCAA  78 29
APT56_RS00650  156693 ..  156746 - -11.7  -2.79183   TGCAGGGCGACTACA TGGCGCTCAACTTCGCCGCCGGGCG CGAAGT CACCCGGCTGCG--GTTGAGCGGCG AGCGCCGGGACACGG  59 467
APT56_RS00640  151629 ..  151646 - -14.1  -4.36127   TCCAACAATGGAAAA             CGCCCGG TTGC CCGGGCG              TTCTCGTCGTGCCAC 100 62
APT56_RS00635 NONE
APT56_RS00630 NONE
APT56_RS00625 NONE
APT56_RS00620  148010 ..  148036 - -13.6  -2.71364   GGACCGCCGGAATGA         TGCAGGGGCCCG TTG CGGGCCCCTTCG         TTTTTGCCGCACGGC  71 51
APT56_RS00610  145323 ..  145357 -    -2  -4.25104   CGGCCTGGAGGAAAA    CGATCTGCCGCTGTC GGCGCT GGC-GCGGGTGATCG     AGATCGACCTGCTGG  65 240
APT56_RS00600  143604 ..  143622 -  -7.3  -3.53012   GGCGGGGTCGCCAAA             GGCGGCC GCGCG GGCGGCC             TTCTTTGGCATTTGG  60 280
APT56_RS00595  142150 ..  142168 -    -8  -3.05463   ATTGCCGCCAGGCAA             CGGCAGCG CGC CGACGCCG             ACGGTTGGCGAGGCT  55 101
APT56_RS00585  139651 ..  139681 - -11.7  -3.29144   CTACCCGCTCGACAA       CACGCCGCCGGCC GGTCT GTCCGGCGCCGCG       CTGGCGCAATGGATC  66 435
APT56_RS00550 NONE
APT56_RS00545  132467 ..  132496 -  -5.6  -2.80307   GAAATGCTCAGTAGA       GGGGGCACG-GCG TCAGG CGCGCGTGCCCGT       CATGGCCAGCCCGAC  47 8
APT56_RS00540 NONE
APT56_RS00535 NONE
APT56_RS00530  128897 ..  128952 -  -2.4  -3.83437   GCACCAACGAAAATA CGAATGGCCTGCTACGCCAGTACTTC CCAA AAAGAACAGGCTTGGCAAACTATACG CAGTGCGAGCTTGAT  55 189
APT56_RS00455  100475 ..  100504 -  -5.7  -3.18849   TGCACATGACCAATA       CCTCCAAC-CTGCC GGT GGAAGCGCTGGAGA       ACGAGTACCCGCTGC  50 440
APT56_RS00435   94972 ..   94989 -  -7.7  -3.33815   ATGCCGTTGAAGTAA             TCGC-CGG ACA CCGCGCGA             TGGTCCGCGCTGCCG  58 92
APT56_RS00385   84783 ..   84841 -  -8.7   -3.1372   GAGGGGGCATGAAGA GTGTGCGTTGCCCGTCATGGCCGGCTGC GCGG GCAGCCGGCCATGACTTACA-CGGTGTC TTGTGGTGGCGCGAT  57 118
APT56_RS00370   81725 ..   81735 -  -8.2  -3.72893   CACTTTGGGATGAAA                 GGCG GGA CGCC                 TGGCGTGCGTTCTAC  67 37
APT56_RS00335   75184 ..   75201 - -14.1  -5.40072   CCGTGGGCAAAAAAA             GGCCCCG ATTC CGGGGCC              TTGTCGTTTCCAGGC 100 58
APT56_RS00300   67929 ..   67949 -   -14  -3.46647   GGCATGCATGAAATA            GGGGCTGC CTTGC GCAGCCCC            TTTTTTATTTGCCGG  81 75
APT56_RS00280 NONE
        rnpA   61693 ..   61705 -  -3.3   -4.7497   GGGACTCAGGAAAAA                CCTGT AGA ACCGG                ATCGGGGCAATGAGG  75 102
APT56_RS00270   59685 ..   59702 - -14.1  -5.86061   GGGGACGAAAAAAAA             CCGGCCC CTGG GGGCCGG              CTTTTCATGGCGCGA 100 48
APT56_RS00265   57940 ..   57961 - -15.1  -5.07523   GACAGACAAAGAAAA           CGGGCGACC CGCG GGCCGCCCG            ATGCGTATTGCGCGG 100 76
APT56_RS00215 NONE
APT56_RS00210   46479 ..   46494 -  -3.2   -3.9122   GAGTTTTTTAAATAA              GTGAGC TATT GCTCAT               TTATTCCGAGCTGAT  56 40
APT56_RS00200   43664 ..   43679 -  -3.2  -3.53012   TTTTTTTCCTGGAAA              CCGG GGTTTTTT CCGG               AAAACTAGTTGTCAA  49 30
APT56_RS00195 NONE
APT56_RS00190   40999 ..   41056 -  -8.1  -3.40403   TTTCCGTTAGTAGAA GGACCGCGCGGCGCAAGCCCGC-CCCGG CCG CCGGTTGCGGGCCGGAGGCACAAGGTGC GCGTTCACCCGCGCG  58 65
APT56_RS00185 NONE
APT56_RS00180   38926 ..   38943 - -12.7  -5.88471   GACGATGAAAAAAAA             GGAGCGC CGCG GCGCTCC              TGAACGACCTCCGGC 100 98
APT56_RS00170   36407 ..   36427 -  -5.4  -4.07568   TCGCTTGCCGCAAAA           GCG-GCAGA CAAG TCCGCGCGC            TGCTTGAATCAACTG  64 128
APT56_RS00165   36014 ..   36046 - -18.6  -4.07246   CCACGCCAAATGAAA     CAACGCCCCAG-ACC GTGA GGTTCTGGGGCGTTG      TAGCCAGGCCTGGCC 100 70
        gidA NONE
APT56_RS00155 NONE
APT56_RS00150 NONE
APT56_RS00145 NONE
APT56_RS00140 NONE
APT56_RS00135   27210 ..   27229 -  -3.4  -4.36914   GGTGCTGGGAGAAAA            GGAGGGGC TGCC GCCCTTGC             CGGACGTGACCTACT  67 198
APT56_RS00125 NONE
APT56_RS00120 NONE
APT56_RS00115   22840 ..   22883 -  -5.1  -3.14132   TCGGTTCGCCATGAA CCG-TCCGCGCCCCGCCGTCG AAAG CGTCGG-GGCGTGCTGATCGG ATGAAGCGTTGCGCG  47 82
APT56_RS00110   21603 ..   21617 -  -2.8  -3.66178   GCGGCCAACGCCAAA               CAGC GCATCCT GCTG               GCCGACTTCAGCAAG  50 180
APT56_RS00085 NONE
APT56_RS00080 NONE
APT56_RS00075 NONE
APT56_RS00070   12037 ..   12047 -  -4.6   -3.5394   AAATCCGCTGTCAAA                 CGCC TGG GACG                 AAAAATATTCAAAAC  53 83
APT56_RS00065   11868 ..   11888 - -11.9  -4.16943   GCCTACATTTTAAAA            TCCAGGCAA ACA TCGCCTGGA            TTCAGGTTTGGGTCT  85 42
APT56_RS00060 NONE
APT56_RS00055 NONE
         tuf   10288 ..   10324 - -15.4  -3.83502   TACTTTTACAGCAAA   GATGGATAGAG-GGACT TGAG AGTCCACTCTACCCATC    CGGGTATTGCTTACT  93 36
APT56_RS00045 NONE
APT56_RS00040 NONE
APT56_RS00035    9121 ..    9139 -  -4.5  -3.53012   CCCCGGGGGTTGAAA             TCAGGTC TTTTC GACCTGG             CTGAAATCCAGTTCG  51 7
APT56_RS00030 NONE
APT56_RS00025    7874 ..    7895 - -14.5  -2.62184   CGGTCTTTGACAGCA           GCATCCGGA GGAA TCCGGATGC            GGCCCAAAGTACGTT  74 54
APT56_RS00020    7133 ..    7153 -  -4.6  -3.14463   AAGGGCGGGGATTAA           GCCGCGGCC TTCT GGTCGCG-C            ACGGCGGCGAGGCCA  47 1
        rplL    6635 ..    6653 -    -3  -3.59979   CCCGGGGACGGCAAA             TTGCGCTG TCC CCGGGCAA             ATTGACGCAGGTCTT   0 39
