locus_tag old_locus_tag gene Name start end strand product note type ID NCBI KB680_gp01 CPT_Mano_001 KB680_gp01 71 606 + terminase small subunit Similar to: ref|WP_109597699.1| DNA-packaging protein [Microvirga sp. 17 mud 1-3] e%3D 4.16417e-68 gene gene-KB680_gp01 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp01 KB680_gp02 CPT_Mano_002 KB680_gp02 590 2638 + terminase large subunit Similar to: ref|YP_009100020.1| large terminase subunit [Escherichia phage vB_EcoM-ep3] e%3D 0 gene gene-KB680_gp02 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp02 KB680_gp03 CPT_Mano_003 KB680_gp03 2651 3205 + hypothetical protein Similar to: ref|YP_008873179.1| hypothetical protein [Pseudomonas phage PPpW-3] e%3D 2.31689e-64 gene gene-KB680_gp03 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp03 KB680_gp04 CPT_Mano_004 KB680_gp04 3193 4806 + portal protein Similar to: ref|YP_009284268.1| putative portal protein [Enterobacter phage Arya] e%3D 0 gene gene-KB680_gp04 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp04 KB680_gp05 CPT_Mano_005 KB680_gp05 4885 6934 + major capsid protein Similar to: ref|YP_009600725.1| major capsid protein [Escherichia phage vB_EcoM_ECOO78] e%3D 0 gene gene-KB680_gp05 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp05 KB680_gp06 CPT_Mano_006 KB680_gp06 7004 7448 + hypothetical protein Similar to: ref|WP_156362547.1| hypothetical protein [Xylophilus sp. Leaf220] e%3D 5.73111e-16 gene gene-KB680_gp06 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp06 KB680_gp07 CPT_Mano_007 KB680_gp07 7438 7798 + head-to-tail connector complex protein Similar to: gpFII%3B twisted beta-sandwich%2C Viral protein%3B NMR {Enterobacteria phage lambda} SCOP: b.106.1.2 e%3D 1.8e-16%3B Related PDB entries: 2KX4_A%2C %25: 99.71 gene gene-KB680_gp07 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp07 KB680_gp08 CPT_Mano_008 KB680_gp08 7786 8339 + hypothetical protein Similar to: ref|WP_109601057.1| hypothetical protein [Microvirga sp. 17 mud 1-3] e%3D 2.06297e-79 gene gene-KB680_gp08 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp08 KB680_gp09 CPT_Mano_009 KB680_gp09 8301 8905 + hypothetical protein Similar to: ref|YP_009600720.1| hypothetical protein vBEcoMECOO78_47 [Escherichia phage vB_EcoM_ECOO78] e%3D 1.90094e-69 gene gene-KB680_gp09 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp09 KB680_gp10 CPT_Mano_010 KB680_gp10 8892 9564 + baseplate spike protein Similar to: emb|VUD38886.1| Baseplate assembly protein V [Escherichia virus P2] e%3D 2.60207e-36 gene gene-KB680_gp10 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp10 KB680_gp11 CPT_Mano_011 KB680_gp11 9601 9954 + baseplate protein Similar to: emb|VUD37934.1| Phage baseplate assembly protein W [Escherichia virus P2] e%3D 1.12151e-24 gene gene-KB680_gp11 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp11 KB680_gp12 CPT_Mano_012 KB680_gp12 9937 10859 + baseplate wedge protein Similar tp: ref|YP_008873189.1| putative baseplate J-like protein [Pseudomonas phage PPpW-3] e%3D 3.57767e-157 gene gene-KB680_gp12 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp12 KB680_gp13 CPT_Mano_013 KB680_gp13 10842 11472 + baseplate wedge protein Similar to: ref|YP_009591446.1| phage tail fibers protein [Escherichia virus P2] e%3D 2.15282e-58%3B Similar to emb|VUD39035.1| Tail protein I [Escherichia virus P2] 3.28571e-53 gene gene-KB680_gp13 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp13 KB680_gp14 CPT_Mano_014 KB680_gp14 11482 13071 + tail fiber protein Similar to: ref|YP_009591447.1| phage tail fiber protein [Escherichia virus P2] e%3D 1.84739e-44 gene gene-KB680_gp14 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp14 KB680_gp15 CPT_Mano_015 KB680_gp15 13063 13266 + hypothetical protein gene gene-KB680_gp15 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp15 KB680_gp16 CPT_Mano_016 KB680_gp16 13232 13558 + hypothetical protein Similar to: gb|ATE84669.1| hypothetical protein phi2LM21_p52 [Sinorhizobium phage phi2LM21] e%3D 6.49506e-14 gene gene-KB680_gp16 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp16 KB680_gp17 CPT_Mano_017 KB680_gp17 13582 14279 + collar protein Similar to: gb|AXF38226.1| putative tail collar protein [Ralstonia phage phiRSP] e%3D 8.68122e-37 gene gene-KB680_gp17 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp17 KB680_gp18 CPT_Mano_018 KB680_gp18 14409 15850 + tail sheath protein Similar to: ref|YP_008873194.1| putative tail sheath protein [Pseudomonas phage PPpW-3] e%3D 0 gene gene-KB680_gp18 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp18 KB680_gp19 CPT_Mano_019 KB680_gp19 15838 16359 + tail tube protein Similar to: ref|YP_008873195.1| putative tail tube protein [Pseudomonas phage PPpW-3] e%3D 2.61108e-77 gene gene-KB680_gp19 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp19 KB680_gp20 CPT_Mano_021 KB680_gp20 16418 16863 + tape measure chaperone tape measure chaperone frameshift product gene gene-KB680_gp20 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp20 KB680_gp21 CPT_Mano_020 KB680_gp21 16418 16720 + tape measure chaperone gb|PVZ43924.1| tail assembly chaperone E/41/14-like protein [Pseudomonas sp. CC120222-01a]%3Be value%3D3.56023e-8 gene gene-KB680_gp21 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp21 KB680_gp22 CPT_Mano_022 KB680_gp22 16828 19039 + tape measure protein Similar to: ref|YP_008873197.1| putative tail protein [Pseudomonas phage PPpW-3] e%3D 0 gene gene-KB680_gp22 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp22 KB680_gp23 CPT_Mano_023 KB680_gp23 19025 19452 + baseplate protein Similar to: emb|VUD38033.1| Phage tail protein [Escherichia virus P2] e%3D 2.7755e-30 gene gene-KB680_gp23 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp23 KB680_gp24 CPT_Mano_024 KB680_gp24 19424 19645 + baseplate protein Similar to: ref|YP_009100042.1| tail protein [Escherichia phage vB_EcoM-ep3] e%3D 1.66329e-25 gene gene-KB680_gp24 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp24 KB680_gp25 CPT_Mano_025 KB680_gp25 19627 20691 + baseplate hub protein ref|NP_046784.1| gpD [Escherichia virus P2]sp|P10312.2| baseplate hub protein D%2C 4.23514E-41 gene gene-KB680_gp25 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp25 KB680_gp26 CPT_Mano_065 KB680_gp26 42111 42369 + o-spanin gnl|BL_ORD_ID|538 1M3-16_SOS%2C e%3D 0.0000377433 gene gene-KB680_gp26 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp26 KB680_gp27 CPT_Mano_064 KB680_gp27 41897 42269 + i-spanin gnl|BL_ORD_ID|135 FSL_SP-069_OIS%2C e%3D0.000019 gene gene-KB680_gp27 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp27 KB680_gp28 CPT_Mano_063 KB680_gp28 41387 41910 + endolysin Similar to: gb|QDJ96115.1| lysozyme [Aeromonas phage 4_D05] e%3D 8.44637e-49 gene gene-KB680_gp28 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp28 KB680_gp29 CPT_Mano_062 KB680_gp29 41077 41393 + antiholin Similar to: ref|YP_009284325.1| hypothetical protein BI096_gp36 [Enterobacter phage Arya] e%3D 4.77115e-17 gene gene-KB680_gp29 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp29 KB680_gp30 CPT_Mano_061 KB680_gp30 40753 41094 + holin class III Similar to: ref|YP_009100016.1| holin [Escherichia phage vB_EcoM-ep3] e%3D 5.5556e-26 gene gene-KB680_gp30 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp30 KB680_gp31 CPT_Mano_060 KB680_gp31 40374 40768 + Mor-like transcription factor Similar to: Middle operon regulator%3B Mor%2C TRANSCRIPTION%3B 2.2A {Enterobacteria phage Mu} SCOP: a.4.1.14%2C 1RR7_A gene gene-KB680_gp31 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp31 KB680_gp32 CPT_Mano_059 KB680_gp32 40047 40304 + hypothetical protein gene gene-KB680_gp32 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp32 KB680_gp33 CPT_Mano_058 KB680_gp33 38801 39744 + hypothetical protein gene gene-KB680_gp33 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp33 KB680_gp34 CPT_Mano_057 KB680_gp34 38287 38797 + hypothetical protein gene gene-KB680_gp34 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp34 KB680_gp35 CPT_Mano_056 KB680_gp35 37810 38239 + hypothetical protein Similar to: ref|WP_139724903.1| hypothetical protein [Streptococcus salivarius] e%3D 6.76388e-18 gene gene-KB680_gp35 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp35 KB680_gp36 CPT_Mano_055 KB680_gp36 37508 37756 + hypothetical protein Similar to: ref|WP_054434532.1| MULTISPECIES: hypothetical protein [unclassified Achromobacter] e%3D 0.00000274802 gene gene-KB680_gp36 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp36 KB680_gp37 CPT_Mano_054 KB680_gp37 37220 37447 + hypothetical protein Similar to: ref|WP_093971619.1| hypothetical protein [Pusillimonas sp. T2] e%3D 0.00017273 gene gene-KB680_gp37 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp37 KB680_gp38 CPT_Mano_053 KB680_gp38 37003 37189 + hypothetical protein Similar to: ref|WP_018310073.1| hypothetical protein [Cupriavidus sp. UYPR2.512] e%3D 5.75802e-11 gene gene-KB680_gp38 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp38 KB680_gp39 CPT_Mano_052 KB680_gp39 34595 36902 + DNA primase Similar to: ref|YP_009100011.1| primase [Escherichia phage vB_EcoM-ep3] e%3D 0 gene gene-KB680_gp39 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp39 KB680_gp40 CPT_Mano_051 KB680_gp40 34364 34624 + hypothetical protein Similar to: gb|ATI15686.1| hypothetical protein [Bordetella phage vB_BbrM_PHB04] e%3D 8.81782e-11 gene gene-KB680_gp40 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp40 KB680_gp41 CPT_Mano_050 KB680_gp41 34189 34386 + hypothetical protein Similar to: ref|WP_109597685.1| hypothetical protein [Microvirga sp. 17 mud 1-3] e%3D 1.90201e-23 gene gene-KB680_gp41 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp41 KB680_gp42 CPT_Mano_049 KB680_gp42 33635 34098 + helix-turn-helix domain-containing protein Similar to: gb|AYR01042.1| HTH DNA binding protein [Arthrobacter phage Isolde] e%3D 0.000578689 gene gene-KB680_gp42 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp42 KB680_gp43 CPT_Mano_048 KB680_gp43 33047 33649 + hypothetical protein Similar to: ref|WP_141984800.1| hypothetical protein [Bordetella hinzii] e%3D 8.97799e-29 gene gene-KB680_gp43 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp43 KB680_gp44 CPT_Mano_047 KB680_gp44 32598 33032 + HNH endonuclease Similar to: CRISPR-associated endonuclease Cas9/RNA Complex%3B CRISPR-Cas9%2C genome engineering%2C HYDROLASE-RNA-DNA complex%3B HET: EDO%2C CA%3B 1.7A {Francisella tularensis subsp. novicida U112}%3B Related PDB entries: 5B2O_A 5B2Q_A%2C %25: 98.33%3B Similar to: ref|WP_124076416.1| HNH endonuclease [Burkholderia gladioli] e%3D 1.39313e-37 gene gene-KB680_gp44 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp44 KB680_gp45 CPT_Mano_046 KB680_gp45 32061 32519 + hypothetical protein Similar to: ref|WP_060350589.1| hypothetical protein [Burkholderia stagnalis] e%3D 2.00339e-17 gene gene-KB680_gp45 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp45 KB680_gp46 CPT_Mano_045 KB680_gp46 31622 31966 + hypothetical protein Similar to: ref|WP_109597684.1| hypothetical protein [Microvirga sp. 17 mud 1-3] e%3D 3.48202e-34 gene gene-KB680_gp46 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp46 KB680_gp47 CPT_Mano_044 KB680_gp47 31229 31634 + flap endonuclease HHpred 4QBL_B classified as hydrolase%2C %25: 99.82 gene gene-KB680_gp47 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp47 KB680_gp48 CPT_Mano_043 KB680_gp48 31018 31242 + hypothetical protein gene gene-KB680_gp48 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp48 KB680_gp49 CPT_Mano_042 KB680_gp49 30084 31030 + ParB-like dsDNA partitioning protein HHpred hit: 1VZ0_A%2C %25: 99.88 gene gene-KB680_gp49 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp49 KB680_gp50 CPT_Mano_041 KB680_gp50 29764 30111 + hypothetical protein Similar to: ref|WP_059623595.1| hypothetical protein [Burkholderia vietnamiensis] e%3D 4.44983e-35 gene gene-KB680_gp50 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp50 KB680_gp51 CPT_Mano_040 KB680_gp51 29617 29761 + hypothetical protein gene gene-KB680_gp51 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp51 KB680_gp52 CPT_Mano_039 KB680_gp52 29396 29633 + hypothetical protein Similar to: ref|WP_109597677.1| hypothetical protein [Microvirga sp. 17 mud 1-3] e%3D 8.73589e-28 gene gene-KB680_gp52 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp52 KB680_gp53 CPT_Mano_038 KB680_gp53 29156 29412 + hypothetical protein gene gene-KB680_gp53 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp53 KB680_gp54 CPT_Mano_037 KB680_gp54 27635 29118 + helicase Similar to: ref|YP_009284307.1| putative DNA helicase [Enterobacter phage Arya] e%3D 0 gene gene-KB680_gp54 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp54 KB680_gp55 CPT_Mano_036 KB680_gp55 27171 27584 - helix-turn-helix domain-containing protein Similar to: ref|WP_109597674.1| helix-turn-helix domain-containing protein [Microvirga sp. 17 mud 1-3] e%3D 2.00573e-30 gene gene-KB680_gp55 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp55 KB680_gp56 CPT_Mano_035 KB680_gp56 25841 27032 - exonuclease Similar to:Exodeoxyribonuclease 8 (E.C.3.1.11.-)%3B Exonuclease%2C Recombination%2C Hydrolase%2C Nuclease%3B 2.8A {Escherichia coli} %25: 99.88%2C e%3D 1.5e-19 gene gene-KB680_gp56 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp56 KB680_gp57 CPT_Mano_034 KB680_gp57 25710 25856 - hypothetical protein gene gene-KB680_gp57 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp57 KB680_gp58 CPT_Mano_033 KB680_gp58 24706 25710 - AAA ATPase Similar to: ref|WP_109597671.1| AAA family ATPase [Microvirga sp. 17 mud 1-3] e%3D 0 gene gene-KB680_gp58 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp58 KB680_gp59 CPT_Mano_032 KB680_gp59 24472 24699 - helix-turn-helix domain-containing protein Similar to: ref|WP_109597670.1| helix-turn-helix domain-containing protein [Microvirga sp. 17 mud 1-3] e%3D 1.51396e-35 gene gene-KB680_gp59 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp59 KB680_gp60 CPT_Mano_031 KB680_gp60 24047 24479 - hypothetical protein Similar to: ref|YP_009284302.1| hypothetical protein BI096_gp59 [Enterobacter phage Arya] e%3D 8.71487e-29 gene gene-KB680_gp60 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp60 KB680_gp61 CPT_Mano_030 KB680_gp61 23848 24068 - DNA-directed RNA polymerase subunit alpha Similar to: DNA-directed RNA polymerase subunit alpha%3B TRANSCRIPTION%2C transcription-dna complex%3B HET: 1N7%3B 3.0A {Escherichia coli} e%3D 9.3e-15%3B Related PDB entries: 5W1S_N%2C %25: 99.58 gene gene-KB680_gp61 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp61 KB680_gp62 CPT_Mano_029 KB680_gp62 23316 23825 - ssDNA binding protein Similar to: gb|AAQ07494.1| Ssb [Enterobacteria phage P7] e%3D 3.81888e-56 gene gene-KB680_gp62 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp62 KB680_gp63 CPT_Mano_028 KB680_gp63 22551 23242 - hypothetical protein Similar to: ref|YP_009284298.1| hypothetical protein BI096_gp63 [Enterobacter phage Arya] e%3D 2.17897e-92 gene gene-KB680_gp63 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp63 KB680_gp64 CPT_Mano_027 KB680_gp64 20958 22306 + integrase Similar to: ref|YP_008873201.1| putative integrase family protein [Pseudomonas phage PPpW-3] e%3D 7.51057e-134 gene gene-KB680_gp64 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gp64 KB680_gt01 CPT_Mano_026 KB680_gt01 20770 20844 - tRNA-Lys tRNA gene-KB680_gt01 http://www.ncbi.nlm.nih.gov/gene/?term=KB680_gt01