C2U31_RS00015	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS00030	SM00860	SMI1 / KNR4 family
C2U31_RS00035	SM00869	Autotransporter beta-domain
C2U31_RS00040	SM00880	C2U31_RS00040
C2U31_RS00040	SM01118	C2U31_RS00040
C2U31_RS00045	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS00045	SM00962	SRP54-type protein, GTPase domain
C2U31_RS00045	SM00963	SRP54-type protein, helical bundle domain
C2U31_RS00080	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_RS00130	SM01400	C2U31_RS00130
C2U31_RS00145	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U31_RS00145	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_RS00160	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
C2U31_RS00160	SM01232	C2U31_RS00160
C2U31_RS00165	SM00849	Metallo-beta-lactamase superfamily
C2U31_RS00195	SM00563	Phosphate acyltransferases
C2U31_RS00205	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS00205	SM00895	C2U31_RS00205
C2U31_RS00215	SM00387	Histidine kinase-like ATPases
C2U31_RS00215	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_RS00220	SM00448	cheY-homologous receiver domain
C2U31_RS00220	SM00862	Transcriptional regulatory protein, C terminal
C2U31_RS00280	SM00984	UDP binding domain
C2U31_RS00305	SM00052	Putative diguanylate phosphodiesterase
C2U31_RS00305	SM00267	diguanylate cyclase
C2U31_RS00315	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS00350	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS00435	SM00267	diguanylate cyclase
C2U31_RS00475	SM00450	Rhodanese Homology Domain
C2U31_RS00495	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_RS00500	SM00862	Transcriptional regulatory protein, C terminal
C2U31_RS00515	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_RS00530	SM00052	Putative diguanylate phosphodiesterase
C2U31_RS00555	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS00570	SM00822	C2U31_RS00570
C2U31_RS00605	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS00645	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS00645	SM00895	C2U31_RS00645
C2U31_RS00685	SM01007	Class II Aldolase and Adducin N-terminal domain
C2U31_RS00700	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS00725	SM00984	UDP binding domain
C2U31_RS00765	SM00656	C2U31_RS00765
C2U31_RS00805	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_RS00825	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C2U31_RS00875	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS00880	SM00155	Phospholipase D. Active site motifs.
C2U31_RS00885	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS00885	SM01086	C-terminal, D2-small domain, of ClpB protein
C2U31_RS00965	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
C2U31_RS00965	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
C2U31_RS00965	SM00493	C2U31_RS00965
C2U31_RS01045	SM00487	DEAD-like helicases superfamily
C2U31_RS01090	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_RS01220	SM00966	SpoVT / AbrB like domain 
C2U31_RS01230	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_RS01305	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS01310	SM00257	Lysin motif
C2U31_RS01315	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS01315	SM00962	SRP54-type protein, GTPase domain
C2U31_RS01315	SM00963	SRP54-type protein, helical bundle domain
C2U31_RS01330	SM00644	C2U31_RS01330
C2U31_RS01340	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_RS01355	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
C2U31_RS01400	SM00487	DEAD-like helicases superfamily
C2U31_RS01405	SM00387	Histidine kinase-like ATPases
C2U31_RS01445	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_RS01450	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_RS01465	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS01470	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS01485	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS01525	SM00232	JAB/MPN domain
C2U31_RS01600	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS01710	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_RS01785	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_RS01870	SM00869	Autotransporter beta-domain
C2U31_RS01875	SM00858	C2U31_RS01875
C2U31_RS01880	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS01880	SM00895	C2U31_RS01880
C2U31_RS01885	SM00822	C2U31_RS01885
C2U31_RS01910	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS01915	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS01920	SM00822	C2U31_RS01920
C2U31_RS01925	SM00861	Transketolase, pyrimidine binding domain
C2U31_RS01990	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS02020	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS02020	SM00895	C2U31_RS02020
C2U31_RS02055	SM01130	C2U31_RS02055
C2U31_RS02095	SM00965	Secretin and TonB N terminus short domain
C2U31_RS02120	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_RS02125	SM00882	Coenzyme A transferase
C2U31_RS02130	SM00882	Coenzyme A transferase
C2U31_RS02165	SM00947	Carbonic anhydrase
C2U31_RS02205	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS02205	SM00895	C2U31_RS02205
C2U31_RS02230	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS02235	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS02240	SM00822	C2U31_RS02240
C2U31_RS02245	SM00822	C2U31_RS02245
C2U31_RS02340	SM00937	C2U31_RS02340
C2U31_RS02435	SM00344	helix_turn_helix ASNC type
C2U31_RS02505	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS02510	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS02520	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS02520	SM00895	C2U31_RS02520
C2U31_RS02550	SM01007	Class II Aldolase and Adducin N-terminal domain
C2U31_RS02560	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS02565	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS02565	SM00895	C2U31_RS02565
C2U31_RS02570	SM01130	C2U31_RS02570
C2U31_RS02585	SM00869	Autotransporter beta-domain
C2U31_RS02610	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_RS02630	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
C2U31_RS02635	SM00862	Transcriptional regulatory protein, C terminal
C2U31_RS02640	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_RS02660	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS02660	SM00895	C2U31_RS02660
C2U31_RS02665	SM00267	diguanylate cyclase
C2U31_RS02675	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C2U31_RS02675	SM00245	tail specific protease
C2U31_RS02685	SM00855	Phosphoglycerate mutase family
C2U31_RS02690	SM00450	Rhodanese Homology Domain
C2U31_RS02745	SM00448	cheY-homologous receiver domain
C2U31_RS02750	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_RS02750	SM00387	Histidine kinase-like ATPases
C2U31_RS02750	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_RS02800	SM00421	helix_turn_helix, Lux Regulon
C2U31_RS02800	SM00448	cheY-homologous receiver domain
C2U31_RS02805	SM00387	Histidine kinase-like ATPases
C2U31_RS02805	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_RS02805	SM00448	cheY-homologous receiver domain
C2U31_RS02810	SM00052	Putative diguanylate phosphodiesterase
C2U31_RS02810	SM00448	cheY-homologous receiver domain
C2U31_RS02835	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2U31_RS02870	SM01118	C2U31_RS02870
C2U31_RS02900	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_RS02965	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS02970	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS03020	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS03040	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS03085	SM00749	bacterial OsmY and nodulation domain
C2U31_RS03175	SM00845	GatB domain
C2U31_RS03205	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
C2U31_RS03240	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS03245	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS03255	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U31_RS03270	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS03290	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS03320	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C2U31_RS03325	SM00849	Metallo-beta-lactamase superfamily
C2U31_RS03380	SM00646	C2U31_RS03380
C2U31_RS03400	SM00912	haemagglutination activity domain
C2U31_RS03410	SM00986	Uracil DNA glycosylase superfamily
C2U31_RS03410	SM00987	UreE urease accessory protein, C-terminal domain 
C2U31_RS03415	SM00487	DEAD-like helicases superfamily
C2U31_RS03415	SM00490	helicase superfamily c-terminal domain
C2U31_RS03420	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_RS03435	SM00859	Semialdehyde dehydrogenase, NAD binding domain
C2U31_RS03470	SM00460	Transglutaminase/protease-like homologues
C2U31_RS03490	SM00996	S-adenosyl-L-homocysteine hydrolase
C2U31_RS03490	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
C2U31_RS03505	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS03535	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_RS03550	SM00344	helix_turn_helix ASNC type
C2U31_RS03650	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS03660	SM00833	Cobalamin synthesis protein cobW C-terminal domain
C2U31_RS03675	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS03675	SM01086	C-terminal, D2-small domain, of ClpB protein
C2U31_RS03740	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS03800	SM01007	Class II Aldolase and Adducin N-terminal domain
C2U31_RS03850	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2U31_RS03860	SM00671	Sel1-like repeats.
C2U31_RS03880	SM00936	Penicillin-binding protein 5, C-terminal domain 
C2U31_RS03900	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS03940	SM00822	C2U31_RS03940
C2U31_RS03965	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS04000	SM00155	Phospholipase D. Active site motifs.
C2U31_RS04020	SM00834	Putative regulatory protein
C2U31_RS04050	SM01130	C2U31_RS04050
C2U31_RS04055	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
C2U31_RS04085	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS04085	SM00895	C2U31_RS04085
C2U31_RS04165	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C2U31_RS04185	SM01219	C2U31_RS04185
C2U31_RS04215	SM01004	Delta-aminolevulinic acid dehydratase
C2U31_RS04225	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS04230	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS04255	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_RS04280	SM00662	RNA polymerases D
C2U31_RS04285	SM00363	S4 RNA-binding domain
C2U31_RS04285	SM01390	C2U31_RS04285
C2U31_RS04360	SM01374	C2U31_RS04360
C2U31_RS04380	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C2U31_RS04380	SM00450	Rhodanese Homology Domain
C2U31_RS04385	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS04400	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS04405	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS04445	SM00322	K homology RNA-binding domain
C2U31_RS04460	SM01382	C2U31_RS04460
C2U31_RS04460	SM01383	C2U31_RS04460
C2U31_RS04480	SM01403	C2U31_RS04480
C2U31_RS04490	SM00838	Elongation factor G C-terminus
C2U31_RS04490	SM00889	Elongation factor G, domain IV
C2U31_RS04505	SM00862	Transcriptional regulatory protein, C terminal
C2U31_RS04510	SM00448	cheY-homologous receiver domain
C2U31_RS04510	SM00862	Transcriptional regulatory protein, C terminal
C2U31_RS04520	SM00387	Histidine kinase-like ATPases
C2U31_RS04520	SM01080	C2U31_RS04520
C2U31_RS04535	SM00663	RNA polymerase I subunit A N-terminus
C2U31_RS04560	SM00649	Ribosomal protein L11/L12
C2U31_RS04565	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
C2U31_RS04565	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
C2U31_RS04605	SM00420	helix_turn_helix, Deoxyribose operon repressor
C2U31_RS04605	SM01134	C2U31_RS04605
C2U31_RS04610	SM00870	C2U31_RS04610
C2U31_RS04615	SM00470	ParB-like nuclease domain
C2U31_RS04635	SM01228	C2U31_RS04635
C2U31_RS04640	SM00357	Cold shock protein domain
C2U31_RS04670	SM00387	Histidine kinase-like ATPases
C2U31_RS04670	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_RS04675	SM00448	cheY-homologous receiver domain
C2U31_RS04675	SM00862	Transcriptional regulatory protein, C terminal
C2U31_RS04705	SM00878	Biotin carboxylase C-terminal domain
C2U31_RS04710	SM00796	Allophanate hydrolase subunit 1
C2U31_RS04715	SM00797	Allophanate hydrolase subunit 2
C2U31_RS04725	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS04790	SM00903	Flavin reductase like domain
C2U31_RS04795	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS04795	SM00895	C2U31_RS04795
C2U31_RS04805	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_RS04840	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS04845	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS04865	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS04880	SM00387	Histidine kinase-like ATPases
C2U31_RS04880	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_RS04880	SM00448	cheY-homologous receiver domain
C2U31_RS04895	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C2U31_RS04910	SM01234	C2U31_RS04910
C2U31_RS04925	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS04925	SM00760	Bacterial dnaA protein helix-turn-helix domain
C2U31_RS04930	SM00480	DNA polymerase III beta subunit
C2U31_RS04935	SM00387	Histidine kinase-like ATPases
C2U31_RS04935	SM00433	TopoisomeraseII
C2U31_RS04995	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS05015	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_RS05030	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS05045	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_RS05050	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS05065	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS05065	SM00895	C2U31_RS05065
C2U31_RS05085	SM00903	Flavin reductase like domain
C2U31_RS05095	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_RS05110	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS05145	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS05145	SM00871	Bacterial transcription activator, effector binding domain
C2U31_RS05165	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS05175	SM00450	Rhodanese Homology Domain
C2U31_RS05195	SM00903	Flavin reductase like domain
C2U31_RS05210	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS05220	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_RS05220	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
C2U31_RS05225	SM00421	helix_turn_helix, Lux Regulon
C2U31_RS05270	SM00344	helix_turn_helix ASNC type
C2U31_RS05280	SM00822	C2U31_RS05280
C2U31_RS05290	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS05300	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
C2U31_RS05300	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
C2U31_RS05300	SM00493	C2U31_RS05300
C2U31_RS05340	SM01119	C2U31_RS05340
C2U31_RS05345	SM00869	Autotransporter beta-domain
C2U31_RS05365	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
C2U31_RS05365	SM00091	PAS domain
C2U31_RS05365	SM00421	helix_turn_helix, Lux Regulon
C2U31_RS05425	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS05460	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS05505	SM00878	Biotin carboxylase C-terminal domain
C2U31_RS05505	SM01209	C2U31_RS05505
C2U31_RS05545	SM00422	helix_turn_helix, mercury resistance
C2U31_RS05550	SM00849	Metallo-beta-lactamase superfamily
C2U31_RS05585	SM00836	DALR anticodon binding domain
C2U31_RS05585	SM01016	Arginyl tRNA synthetase N terminal dom
C2U31_RS05600	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS05600	SM00895	C2U31_RS05600
C2U31_RS05635	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS05645	SM00354	helix_turn _helix lactose operon repressor
C2U31_RS05655	SM00917	LeuA allosteric (dimerisation) domain
C2U31_RS05710	SM00487	DEAD-like helicases superfamily
C2U31_RS05710	SM00490	helicase superfamily c-terminal domain
C2U31_RS05725	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS05755	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS05820	SM01007	Class II Aldolase and Adducin N-terminal domain
C2U31_RS05825	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS05845	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C2U31_RS05850	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_RS05935	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS05960	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS06110	SM00984	UDP binding domain
C2U31_RS06125	SM00344	helix_turn_helix ASNC type
C2U31_RS06150	SM00903	Flavin reductase like domain
C2U31_RS06190	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS06210	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_RS06220	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS06225	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS06285	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_RS06310	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U31_RS06310	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_RS06315	SM00052	Putative diguanylate phosphodiesterase
C2U31_RS06315	SM00091	PAS domain
C2U31_RS06315	SM00267	diguanylate cyclase
C2U31_RS06385	SM00448	cheY-homologous receiver domain
C2U31_RS06385	SM00862	Transcriptional regulatory protein, C terminal
C2U31_RS06390	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_RS06390	SM00387	Histidine kinase-like ATPases
C2U31_RS06390	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_RS06405	SM00829	Enoylreductase
C2U31_RS06415	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS06415	SM00866	C2U31_RS06415
C2U31_RS06450	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U31_RS06450	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_RS06455	SM00972	Spore Coat Protein U domain
C2U31_RS06470	SM00972	Spore Coat Protein U domain
C2U31_RS06475	SM00972	Spore Coat Protein U domain
C2U31_RS06490	SM00972	Spore Coat Protein U domain
C2U31_RS06540	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_RS06560	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS06575	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS06640	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C2U31_RS06685	SM00460	Transglutaminase/protease-like homologues
C2U31_RS06725	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS06765	SM00925	MltA specific insert domain
C2U31_RS06790	SM00905	Dihydroneopterin aldolase
C2U31_RS06860	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS06880	SM00487	DEAD-like helicases superfamily
C2U31_RS06880	SM00490	helicase superfamily c-terminal domain
C2U31_RS06890	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS06915	SM00966	SpoVT / AbrB like domain 
C2U31_RS06930	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS06935	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS07030	SM00869	Autotransporter beta-domain
C2U31_RS07035	SM00052	Putative diguanylate phosphodiesterase
C2U31_RS07035	SM00267	diguanylate cyclase
C2U31_RS07075	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS07080	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS07090	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS07090	SM00895	C2U31_RS07090
C2U31_RS07125	SM00421	helix_turn_helix, Lux Regulon
C2U31_RS07155	SM00858	C2U31_RS07155
C2U31_RS07160	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS07160	SM00866	C2U31_RS07160
C2U31_RS07190	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS07190	SM00895	C2U31_RS07190
C2U31_RS07200	SM00797	Allophanate hydrolase subunit 2
C2U31_RS07205	SM00796	Allophanate hydrolase subunit 1
C2U31_RS07245	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_RS07245	SM00387	Histidine kinase-like ATPases
C2U31_RS07245	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_RS07250	SM00448	cheY-homologous receiver domain
C2U31_RS07250	SM00862	Transcriptional regulatory protein, C terminal
C2U31_RS07255	SM00387	Histidine kinase-like ATPases
C2U31_RS07255	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_RS07260	SM00448	cheY-homologous receiver domain
C2U31_RS07260	SM00862	Transcriptional regulatory protein, C terminal
C2U31_RS07270	SM00978	C2U31_RS07270
C2U31_RS07295	SM00869	Autotransporter beta-domain
C2U31_RS07330	SM01018	B12 binding domain
C2U31_RS07340	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS07340	SM00895	C2U31_RS07340
C2U31_RS07355	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS07360	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_RS07375	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS07425	SM00830	Chorismate mutase type II
C2U31_RS07480	SM00421	helix_turn_helix, Lux Regulon
C2U31_RS07565	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS07570	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS07575	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_RS07610	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U31_RS07630	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS07635	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS07640	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_RS07640	SM00331	Sigma factor PP2C-like phosphatases
C2U31_RS07655	SM00267	diguanylate cyclase
C2U31_RS07660	SM00052	Putative diguanylate phosphodiesterase
C2U31_RS07660	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
C2U31_RS07660	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
C2U31_RS07660	SM00091	PAS domain
C2U31_RS07660	SM00267	diguanylate cyclase
C2U31_RS07670	SM00822	C2U31_RS07670
C2U31_RS07700	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS07730	SM00822	C2U31_RS07730
C2U31_RS07770	SM00732	Likely ribonuclease with RNase H fold.
C2U31_RS07785	SM00563	Phosphate acyltransferases
C2U31_RS07805	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_RS07820	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS07850	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS07875	SM00387	Histidine kinase-like ATPases
C2U31_RS07875	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_RS07880	SM00448	cheY-homologous receiver domain
C2U31_RS07880	SM00862	Transcriptional regulatory protein, C terminal
C2U31_RS07885	SM00955	C2U31_RS07885
C2U31_RS07915	SM00878	Biotin carboxylase C-terminal domain
C2U31_RS07990	SM00344	helix_turn_helix ASNC type
C2U31_RS08055	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS08060	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS08075	SM00859	Semialdehyde dehydrogenase, NAD binding domain
C2U31_RS08100	SM00363	S4 RNA-binding domain
C2U31_RS08125	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS08150	SM00763	PrkA AAA domain
C2U31_RS08210	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_RS08225	SM00822	C2U31_RS08225
C2U31_RS08280	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U31_RS08305	SM00257	Lysin motif
C2U31_RS08310	SM00849	Metallo-beta-lactamase superfamily
C2U31_RS08335	SM00479	C2U31_RS08335
C2U31_RS08430	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS08445	SM00838	Elongation factor G C-terminus
C2U31_RS08445	SM00889	Elongation factor G, domain IV
C2U31_RS08455	SM00344	helix_turn_helix ASNC type
C2U31_RS08470	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS08525	SM00448	cheY-homologous receiver domain
C2U31_RS08525	SM00862	Transcriptional regulatory protein, C terminal
C2U31_RS08535	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS08570	SM00387	Histidine kinase-like ATPases
C2U31_RS08570	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_RS08665	SM00344	helix_turn_helix ASNC type
C2U31_RS08700	SM00151	SWI complex, BAF60b domains
C2U31_RS08715	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS08775	SM01209	C2U31_RS08775
C2U31_RS08785	SM00842	Cell division protein FtsA
C2U31_RS08790	SM00864	Tubulin/FtsZ family, GTPase domain
C2U31_RS08790	SM00865	Tubulin/FtsZ family, C-terminal domain
C2U31_RS08810	SM00957	SecA DEAD-like domain
C2U31_RS08810	SM00958	SecA preprotein cross-linking domain
C2U31_RS08820	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS08820	SM00895	C2U31_RS08820
C2U31_RS08850	SM00344	helix_turn_helix ASNC type
C2U31_RS08865	SM00116	Domain in cystathionine beta-synthase and other proteins.
C2U31_RS08865	SM00924	MgtE intracellular N domain
C2U31_RS08910	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS08910	SM00930	C2U31_RS08910
C2U31_RS08945	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS08975	SM00267	diguanylate cyclase
C2U31_RS08985	SM00822	C2U31_RS08985
C2U31_RS09005	SM01329	C2U31_RS09005
C2U31_RS09050	SM00650	Ribosomal RNA adenine dimethylases
C2U31_RS09095	SM00563	Phosphate acyltransferases
C2U31_RS09135	SM00822	C2U31_RS09135
C2U31_RS09250	SM00853	MutL C terminal dimerisation domain
C2U31_RS09250	SM01340	C2U31_RS09250
C2U31_RS09260	SM00646	C2U31_RS09260
C2U31_RS09325	SM00903	Flavin reductase like domain
C2U31_RS09350	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS09405	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C2U31_RS09425	SM00859	Semialdehyde dehydrogenase, NAD binding domain
C2U31_RS09450	SM00421	helix_turn_helix, Lux Regulon
C2U31_RS09450	SM00448	cheY-homologous receiver domain
C2U31_RS09485	SM00490	helicase superfamily c-terminal domain
C2U31_RS09485	SM00957	SecA DEAD-like domain
C2U31_RS09485	SM00958	SecA preprotein cross-linking domain
C2U31_RS09535	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS09540	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_RS09565	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS09570	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS09635	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U31_RS09655	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS09660	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS09670	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS09680	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS09730	SM00341	Helicase and RNase D C-terminal
C2U31_RS09730	SM00487	DEAD-like helicases superfamily
C2U31_RS09730	SM00490	helicase superfamily c-terminal domain
C2U31_RS09730	SM00956	C2U31_RS09730
C2U31_RS09740	SM00448	cheY-homologous receiver domain
C2U31_RS09740	SM00862	Transcriptional regulatory protein, C terminal
C2U31_RS09745	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_RS09745	SM00387	Histidine kinase-like ATPases
C2U31_RS09750	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS09765	SM00278	Helix-hairpin-helix DNA-binding motif class 1
C2U31_RS09775	SM00798	AICARFT/IMPCHase bienzyme
C2U31_RS09775	SM00851	MGS-like domain
C2U31_RS09800	SM01011	Aminopeptidase P, N-terminal domain
C2U31_RS09815	SM00831	Cation transporter/ATPase, N-terminus
C2U31_RS09870	SM00487	DEAD-like helicases superfamily
C2U31_RS09870	SM00490	helicase superfamily c-terminal domain
C2U31_RS09885	SM00852	Probable molybdopterin binding domain
C2U31_RS09890	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_RS09960	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
C2U31_RS09970	SM01130	C2U31_RS09970
C2U31_RS09975	SM00858	C2U31_RS09975
C2U31_RS09980	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_RS09985	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS10000	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS10000	SM00895	C2U31_RS10000
C2U31_RS10055	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
C2U31_RS10055	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
C2U31_RS10055	SM00493	C2U31_RS10055
C2U31_RS10100	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS10190	SM00487	DEAD-like helicases superfamily
C2U31_RS10305	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_RS10340	SM00953	C2U31_RS10340
C2U31_RS10400	SM00829	Enoylreductase
C2U31_RS10430	SM00882	Coenzyme A transferase
C2U31_RS10435	SM00882	Coenzyme A transferase
C2U31_RS10475	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
C2U31_RS10540	SM00829	Enoylreductase
C2U31_RS10550	SM00849	Metallo-beta-lactamase superfamily
C2U31_RS10570	SM00829	Enoylreductase
C2U31_RS10585	SM00822	C2U31_RS10585
C2U31_RS10610	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_RS10675	SM00965	Secretin and TonB N terminus short domain
C2U31_RS10695	SM00448	cheY-homologous receiver domain
C2U31_RS10695	SM00862	Transcriptional regulatory protein, C terminal
C2U31_RS10700	SM00387	Histidine kinase-like ATPases
C2U31_RS10705	SM00495	Chitin-binding domain type 3
C2U31_RS10715	SM00870	C2U31_RS10715
C2U31_RS10725	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_RS10760	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS10840	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
C2U31_RS10840	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
C2U31_RS10840	SM00493	C2U31_RS10840
C2U31_RS10880	SM00267	diguanylate cyclase
C2U31_RS10940	SM00487	DEAD-like helicases superfamily
C2U31_RS11125	SM00822	C2U31_RS11125
C2U31_RS11140	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS11170	SM00953	C2U31_RS11170
C2U31_RS11250	SM00271	DnaJ molecular chaperone homology domain
C2U31_RS11285	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS11305	SM01329	C2U31_RS11305
C2U31_RS11320	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U31_RS11320	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_RS11320	SM01049	C2U31_RS11320
C2U31_RS11325	SM01130	C2U31_RS11325
C2U31_RS11340	SM00448	cheY-homologous receiver domain
C2U31_RS11340	SM00862	Transcriptional regulatory protein, C terminal
C2U31_RS11345	SM00387	Histidine kinase-like ATPases
C2U31_RS11345	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_RS11385	SM00463	Small MutS-related domain
C2U31_RS11395	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS11395	SM00843	C2U31_RS11395
C2U31_RS11420	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS11425	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS11445	SM01119	C2U31_RS11445
C2U31_RS11470	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS11525	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS11530	SM00052	Putative diguanylate phosphodiesterase
C2U31_RS11535	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U31_RS11535	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_RS11540	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_RS11540	SM00387	Histidine kinase-like ATPases
C2U31_RS11540	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_RS11570	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS11625	SM01387	C2U31_RS11625
C2U31_RS11630	SM00316	Ribosomal protein S1-like RNA-binding domain
C2U31_RS11630	SM00322	K homology RNA-binding domain
C2U31_RS11650	SM01130	C2U31_RS11650
C2U31_RS11665	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_RS11735	SM00421	helix_turn_helix, Lux Regulon
C2U31_RS11735	SM00448	cheY-homologous receiver domain
C2U31_RS11740	SM00052	Putative diguanylate phosphodiesterase
C2U31_RS11740	SM00448	cheY-homologous receiver domain
C2U31_RS11745	SM00448	cheY-homologous receiver domain
C2U31_RS11745	SM00862	Transcriptional regulatory protein, C terminal
C2U31_RS11750	SM00862	Transcriptional regulatory protein, C terminal
C2U31_RS11765	SM00448	cheY-homologous receiver domain
C2U31_RS11765	SM00862	Transcriptional regulatory protein, C terminal
C2U31_RS11785	SM00829	Enoylreductase
C2U31_RS11830	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS11875	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS11905	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
C2U31_RS11905	SM00267	diguanylate cyclase
C2U31_RS11920	SM00736	Dystroglycan-type cadherin-like domains.
C2U31_RS11980	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
C2U31_RS11985	SM00422	helix_turn_helix, mercury resistance
C2U31_RS12115	SM00387	Histidine kinase-like ATPases
C2U31_RS12115	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_RS12120	SM00448	cheY-homologous receiver domain
C2U31_RS12120	SM00862	Transcriptional regulatory protein, C terminal
C2U31_RS12140	SM00822	C2U31_RS12140
C2U31_RS12145	SM00912	haemagglutination activity domain
C2U31_RS12160	SM00965	Secretin and TonB N terminus short domain
C2U31_RS12170	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
C2U31_RS12170	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS12245	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS12325	SM00046	Diacylglycerol kinase catalytic domain (presumed)
C2U31_RS12335	SM00014	Acid phosphatase homologues
C2U31_RS12385	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
C2U31_RS12390	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
C2U31_RS12445	SM00487	DEAD-like helicases superfamily
C2U31_RS12445	SM00490	helicase superfamily c-terminal domain
C2U31_RS12445	SM00982	C2U31_RS12445
C2U31_RS12445	SM01058	CarD-like/TRCF domain
C2U31_RS12475	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_RS12475	SM00387	Histidine kinase-like ATPases
C2U31_RS12475	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_RS12480	SM00448	cheY-homologous receiver domain
C2U31_RS12480	SM00862	Transcriptional regulatory protein, C terminal
C2U31_RS12490	SM00986	Uracil DNA glycosylase superfamily
C2U31_RS12490	SM00987	UreE urease accessory protein, C-terminal domain 
C2U31_RS12500	SM00968	SMC proteins Flexible Hinge Domain
C2U31_RS12505	SM00771	ZipA, C-terminal domain (FtsZ-binding)
C2U31_RS12510	SM00278	Helix-hairpin-helix DNA-binding motif class 1
C2U31_RS12510	SM00292	breast cancer carboxy-terminal domain
C2U31_RS12510	SM00532	Ligase N family
C2U31_RS12515	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_RS12560	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS12585	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS12590	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS12595	SM01022	C2U31_RS12595
C2U31_RS12625	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS12630	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS12635	SM00478	endonuclease III
C2U31_RS12635	SM00525	C2U31_RS12635
C2U31_RS12690	SM00954	Region found in RelA / SpoT proteins
C2U31_RS12760	SM00470	ParB-like nuclease domain
C2U31_RS12780	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_RS12920	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS12970	SM00316	Ribosomal protein S1-like RNA-binding domain
C2U31_RS12975	SM00363	S4 RNA-binding domain
C2U31_RS12995	SM00644	C2U31_RS12995
C2U31_RS13030	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
C2U31_RS13035	SM00822	C2U31_RS13035
C2U31_RS13045	SM00825	Beta-ketoacyl synthase
C2U31_RS13070	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C2U31_RS13075	SM00838	Elongation factor G C-terminus
C2U31_RS13085	SM00358	Double-stranded RNA binding motif
C2U31_RS13085	SM00535	Ribonuclease III family
C2U31_RS13230	SM00882	Coenzyme A transferase
C2U31_RS13235	SM00882	Coenzyme A transferase
C2U31_RS13245	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS13265	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS13305	SM01130	C2U31_RS13305
C2U31_RS13325	SM01192	C2U31_RS13325
C2U31_RS13325	SM01193	C2U31_RS13325
C2U31_RS13380	SM00981	C2U31_RS13380
C2U31_RS13410	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS13410	SM00866	C2U31_RS13410
C2U31_RS13445	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS13470	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS13475	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS13485	SM00387	Histidine kinase-like ATPases
C2U31_RS13485	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_RS13490	SM00448	cheY-homologous receiver domain
C2U31_RS13490	SM00862	Transcriptional regulatory protein, C terminal
C2U31_RS13510	SM00919	Malic enzyme, NAD binding domain
C2U31_RS13510	SM01274	C2U31_RS13510
C2U31_RS13535	SM00344	helix_turn_helix ASNC type
C2U31_RS13540	SM00861	Transketolase, pyrimidine binding domain
C2U31_RS13595	SM00912	haemagglutination activity domain
C2U31_RS13605	SM00316	Ribosomal protein S1-like RNA-binding domain
C2U31_RS13605	SM00732	Likely ribonuclease with RNase H fold.
C2U31_RS13610	SM00491	C2U31_RS13610
C2U31_RS13620	SM00363	S4 RNA-binding domain
C2U31_RS13635	SM00822	C2U31_RS13635
C2U31_RS13670	SM00749	bacterial OsmY and nodulation domain
C2U31_RS13685	SM01209	C2U31_RS13685
C2U31_RS13695	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS13765	SM00028	Tetratricopeptide repeats
C2U31_RS13875	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_RS13880	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_RS13915	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS14160	SM00434	DNA Topoisomerase IV
C2U31_RS14170	SM00830	Chorismate mutase type II
C2U31_RS14195	SM00316	Ribosomal protein S1-like RNA-binding domain
C2U31_RS14200	SM00411	bacterial (prokaryotic) histone like domain
C2U31_RS14225	SM00278	Helix-hairpin-helix DNA-binding motif class 1
C2U31_RS14245	SM00893	Electron transfer flavoprotein domain
C2U31_RS14250	SM00893	Electron transfer flavoprotein domain
C2U31_RS14275	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS14295	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2U31_RS14330	SM00479	C2U31_RS14330
C2U31_RS14435	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C2U31_RS14440	SM00387	Histidine kinase-like ATPases
C2U31_RS14440	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_RS14445	SM00448	cheY-homologous receiver domain
C2U31_RS14445	SM00862	Transcriptional regulatory protein, C terminal
C2U31_RS14460	SM00833	Cobalamin synthesis protein cobW C-terminal domain
C2U31_RS14480	SM00363	S4 RNA-binding domain
C2U31_RS14490	SM00316	Ribosomal protein S1-like RNA-binding domain
C2U31_RS14530	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
C2U31_RS14530	SM00474	3'-5' exonuclease
C2U31_RS14530	SM00475	5'-3' exonuclease
C2U31_RS14530	SM00479	C2U31_RS14530
C2U31_RS14530	SM00482	DNA polymerase A domain
C2U31_RS14555	SM00354	helix_turn _helix lactose operon repressor
C2U31_RS14575	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS14600	SM00450	Rhodanese Homology Domain
C2U31_RS14615	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS14655	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_RS14670	SM00861	Transketolase, pyrimidine binding domain
C2U31_RS14710	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS14730	SM00344	helix_turn_helix ASNC type
C2U31_RS14755	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS14770	SM00248	ankyrin repeats
C2U31_RS14815	SM00267	diguanylate cyclase
C2U31_RS14835	SM00387	Histidine kinase-like ATPases
C2U31_RS14835	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_RS14840	SM00448	cheY-homologous receiver domain
C2U31_RS14840	SM00862	Transcriptional regulatory protein, C terminal
C2U31_RS14845	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS14880	SM00881	CoA binding domain
C2U31_RS14920	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_RS14940	SM00822	C2U31_RS14940
C2U31_RS14945	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS14950	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS14960	SM00886	Stress responsive A/B Barrel Domain
C2U31_RS14975	SM00670	Large family of predicted nucleotide-binding domains
C2U31_RS15025	SM00528	Domain in histone-like proteins of HNS family
C2U31_RS15070	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
C2U31_RS15070	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
C2U31_RS15165	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS15280	SM00267	diguanylate cyclase
C2U31_RS15375	SM00989	C2U31_RS15375
C2U31_RS15390	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS15420	SM00905	Dihydroneopterin aldolase
C2U31_RS15435	SM01144	C2U31_RS15435
C2U31_RS15445	SM00316	Ribosomal protein S1-like RNA-binding domain
C2U31_RS15445	SM00357	Cold shock protein domain
C2U31_RS15445	SM00955	C2U31_RS15445
C2U31_RS15450	SM00967	RNA 2'-O ribose methyltransferase substrate binding
C2U31_RS15460	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
C2U31_RS15465	SM00411	bacterial (prokaryotic) histone like domain
C2U31_RS15490	SM00448	cheY-homologous receiver domain
C2U31_RS15490	SM00862	Transcriptional regulatory protein, C terminal
C2U31_RS15495	SM00387	Histidine kinase-like ATPases
C2U31_RS15495	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_RS15580	SM01120	C2U31_RS15580
C2U31_RS15595	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS15730	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS15730	SM00487	DEAD-like helicases superfamily
C2U31_RS15730	SM00490	helicase superfamily c-terminal domain
C2U31_RS15730	SM00847	Helicase associated domain (HA2)  Add an annotation
C2U31_RS15740	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS15750	SM00481	DNA polymerase alpha chain like domain
C2U31_RS15805	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS15820	SM00267	diguanylate cyclase
C2U31_RS15825	SM00267	diguanylate cyclase
C2U31_RS15845	SM00316	Ribosomal protein S1-like RNA-binding domain
C2U31_RS15880	SM01007	Class II Aldolase and Adducin N-terminal domain
C2U31_RS15970	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U31_RS15975	SM00411	bacterial (prokaryotic) histone like domain
C2U31_RS15980	SM00936	Penicillin-binding protein 5, C-terminal domain 
C2U31_RS16000	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS16050	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS16070	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS16070	SM00895	C2U31_RS16070
C2U31_RS16105	SM00965	Secretin and TonB N terminus short domain
C2U31_RS16125	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS16170	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS16190	SM00862	Transcriptional regulatory protein, C terminal
C2U31_RS16225	SM00278	Helix-hairpin-helix DNA-binding motif class 1
C2U31_RS16225	SM00465	GIY-YIG type nucleases (URI domain)
C2U31_RS16255	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS16255	SM00895	C2U31_RS16255
C2U31_RS16265	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS16370	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
C2U31_RS16375	SM01130	C2U31_RS16375
C2U31_RS16380	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS16410	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS16445	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS16490	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS16490	SM00895	C2U31_RS16490
C2U31_RS16525	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS16545	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS16575	SM00363	S4 RNA-binding domain
C2U31_RS16585	SM00052	Putative diguanylate phosphodiesterase
C2U31_RS16585	SM00267	diguanylate cyclase
C2U31_RS16610	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS16745	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS16755	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS16765	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_RS16780	SM00834	Putative regulatory protein
C2U31_RS16820	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
C2U31_RS16855	SM00938	Nitrogen regulatory protein P-II
C2U31_RS16870	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS16890	SM00873	B3/4 domain
C2U31_RS16890	SM00874	tRNA synthetase B5 domain
C2U31_RS16890	SM00896	Ferredoxin-fold anticodon binding domain
C2U31_RS16895	SM00411	bacterial (prokaryotic) histone like domain
C2U31_RS16900	SM00422	helix_turn_helix, mercury resistance
C2U31_RS16915	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
C2U31_RS16970	SM00344	helix_turn_helix ASNC type
C2U31_RS17020	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_RS17030	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS17060	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS17090	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS17120	SM00267	diguanylate cyclase
C2U31_RS17185	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS17245	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U31_RS17270	SM00100	Cyclic nucleotide-monophosphate binding domain
C2U31_RS17270	SM00419	helix_turn_helix, cAMP Regulatory protein
C2U31_RS17275	SM00506	Appr-1"-p processing enzyme
C2U31_RS17300	SM00855	Phosphoglycerate mutase family
C2U31_RS17310	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS17360	SM00354	helix_turn _helix lactose operon repressor
C2U31_RS17395	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_RS17415	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS17415	SM00895	C2U31_RS17415
C2U31_RS17450	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS17480	SM00422	helix_turn_helix, mercury resistance
C2U31_RS17490	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U31_RS17500	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS17520	SM00822	C2U31_RS17520
C2U31_RS17525	SM00822	C2U31_RS17525
C2U31_RS17540	SM00861	Transketolase, pyrimidine binding domain
C2U31_RS17590	SM00938	Nitrogen regulatory protein P-II
C2U31_RS17605	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS17775	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS17780	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS17795	SM01322	C2U31_RS17795
C2U31_RS17875	SM00421	helix_turn_helix, Lux Regulon
C2U31_RS17875	SM00448	cheY-homologous receiver domain
C2U31_RS17880	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
C2U31_RS17880	SM00091	PAS domain
C2U31_RS17880	SM00387	Histidine kinase-like ATPases
C2U31_RS17880	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_RS17960	SM00448	cheY-homologous receiver domain
C2U31_RS17965	SM00073	Histidine Phosphotransfer domain
C2U31_RS17965	SM00260	Two component signalling adaptor domain
C2U31_RS17965	SM00387	Histidine kinase-like ATPases
C2U31_RS17965	SM01231	C2U31_RS17965
C2U31_RS17970	SM00260	Two component signalling adaptor domain
C2U31_RS17975	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U31_RS17975	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_RS17980	SM00138	Methyltransferase, chemotaxis proteins 
C2U31_RS17985	SM00448	cheY-homologous receiver domain
C2U31_RS17990	SM00448	cheY-homologous receiver domain
C2U31_RS18000	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U31_RS18015	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS18015	SM00962	SRP54-type protein, GTPase domain
C2U31_RS18030	SM00858	C2U31_RS18030
C2U31_RS18075	SM00047	Lysozyme subfamily 2
C2U31_RS18090	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U31_RS18090	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_RS18095	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U31_RS18095	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_RS18105	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U31_RS18105	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_RS18155	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS18280	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C2U31_RS18325	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C2U31_RS18335	SM00935	Outer membrane protein (OmpH-like)
C2U31_RS18420	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS18435	SM00244	prohibitin homologues
C2U31_RS18440	SM00267	diguanylate cyclase
C2U31_RS18510	SM00248	ankyrin repeats
C2U31_RS18515	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_RS18520	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_RS18520	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
C2U31_RS18530	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS18545	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
C2U31_RS18585	SM00344	helix_turn_helix ASNC type
C2U31_RS18635	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
C2U31_RS18635	SM00091	PAS domain
C2U31_RS18635	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U31_RS18635	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_RS18700	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS18740	SM00344	helix_turn_helix ASNC type
C2U31_RS18745	SM00506	Appr-1"-p processing enzyme
C2U31_RS18775	SM00869	Autotransporter beta-domain
C2U31_RS18805	SM00487	DEAD-like helicases superfamily
C2U31_RS18805	SM00490	helicase superfamily c-terminal domain
C2U31_RS18820	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_RS18840	SM00344	helix_turn_helix ASNC type
C2U31_RS18865	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS18870	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS18880	SM00833	Cobalamin synthesis protein cobW C-terminal domain
C2U31_RS18895	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS18905	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS18910	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_RS18930	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_RS18945	SM00858	C2U31_RS18945
C2U31_RS18965	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS18970	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_RS18975	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
C2U31_RS18985	SM00421	helix_turn_helix, Lux Regulon
C2U31_RS18985	SM00448	cheY-homologous receiver domain
C2U31_RS18990	SM00387	Histidine kinase-like ATPases
C2U31_RS18990	SM01049	C2U31_RS18990
C2U31_RS19020	SM00344	helix_turn_helix ASNC type
C2U31_RS19040	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS19050	SM00448	cheY-homologous receiver domain
C2U31_RS19050	SM00862	Transcriptional regulatory protein, C terminal
C2U31_RS19070	SM00052	Putative diguanylate phosphodiesterase
C2U31_RS19070	SM00448	cheY-homologous receiver domain
C2U31_RS19135	SM00448	cheY-homologous receiver domain
C2U31_RS19135	SM00862	Transcriptional regulatory protein, C terminal
C2U31_RS19140	SM00387	Histidine kinase-like ATPases
C2U31_RS19140	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_RS19215	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS19225	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS19225	SM00866	C2U31_RS19225
C2U31_RS19245	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS19250	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS19290	SM00450	Rhodanese Homology Domain
C2U31_RS19310	SM00100	Cyclic nucleotide-monophosphate binding domain
C2U31_RS19310	SM00419	helix_turn_helix, cAMP Regulatory protein
C2U31_RS19315	SM00421	helix_turn_helix, Lux Regulon
C2U31_RS19315	SM00448	cheY-homologous receiver domain
C2U31_RS19320	SM00091	PAS domain
C2U31_RS19320	SM00387	Histidine kinase-like ATPases
C2U31_RS19330	SM00116	Domain in cystathionine beta-synthase and other proteins.
C2U31_RS19335	SM00849	Metallo-beta-lactamase superfamily
C2U31_RS19335	SM01027	Beta-Casp domain
C2U31_RS19380	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C2U31_RS19405	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2U31_RS19410	SM00947	Carbonic anhydrase
C2U31_RS19420	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
C2U31_RS19420	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_RS19420	SM00387	Histidine kinase-like ATPases
C2U31_RS19425	SM00421	helix_turn_helix, Lux Regulon
C2U31_RS19425	SM00448	cheY-homologous receiver domain
C2U31_RS19455	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_RS19475	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS19490	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS19530	SM00965	Secretin and TonB N terminus short domain
C2U31_RS19545	SM00912	haemagglutination activity domain
C2U31_RS19615	SM01092	CO dehydrogenase flavoprotein C-terminal domain
C2U31_RS19625	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
C2U31_RS19670	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U31_RS19685	SM00450	Rhodanese Homology Domain
C2U31_RS19710	SM00421	helix_turn_helix, Lux Regulon
C2U31_RS19710	SM00448	cheY-homologous receiver domain
C2U31_RS19715	SM00387	Histidine kinase-like ATPases
C2U31_RS19715	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_RS19720	SM00116	Domain in cystathionine beta-synthase and other proteins.
C2U31_RS19730	SM00859	Semialdehyde dehydrogenase, NAD binding domain
C2U31_RS19740	SM00849	Metallo-beta-lactamase superfamily
C2U31_RS19800	SM00849	Metallo-beta-lactamase superfamily
C2U31_RS19835	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_RS19835	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
C2U31_RS19845	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS19860	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_RS19880	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS19910	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS19935	SM01006	Siderophore biosynthesis protein domain
C2U31_RS19945	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS19980	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS19985	SM00822	C2U31_RS19985
C2U31_RS19990	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS19990	SM00895	C2U31_RS19990
C2U31_RS20095	SM00155	Phospholipase D. Active site motifs.
C2U31_RS20100	SM00823	Phosphopantetheine attachment site
C2U31_RS20100	SM01294	C2U31_RS20100
C2U31_RS20105	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
C2U31_RS20140	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS20210	SM00880	C2U31_RS20210
C2U31_RS20220	SM00749	bacterial OsmY and nodulation domain
C2U31_RS20250	SM01192	C2U31_RS20250
C2U31_RS20250	SM01193	C2U31_RS20250
C2U31_RS20265	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS20275	SM00822	C2U31_RS20275
C2U31_RS20360	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS20360	SM00866	C2U31_RS20360
C2U31_RS20385	SM00363	S4 RNA-binding domain
C2U31_RS20390	SM00422	helix_turn_helix, mercury resistance
C2U31_RS20420	SM00267	diguanylate cyclase
C2U31_RS20425	SM00267	diguanylate cyclase
C2U31_RS20475	SM00965	Secretin and TonB N terminus short domain
C2U31_RS20480	SM00912	haemagglutination activity domain
C2U31_RS20495	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS20525	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U31_RS20555	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_RS20555	SM00387	Histidine kinase-like ATPases
C2U31_RS20555	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_RS20560	SM01091	Transporter associated domain
C2U31_RS20575	SM00052	Putative diguanylate phosphodiesterase
C2U31_RS20600	SM00829	Enoylreductase
C2U31_RS20635	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS20640	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS20685	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS20700	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_RS20700	SM00387	Histidine kinase-like ATPases
C2U31_RS20700	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_RS20705	SM00448	cheY-homologous receiver domain
C2U31_RS20705	SM00862	Transcriptional regulatory protein, C terminal
C2U31_RS20730	SM00487	DEAD-like helicases superfamily
C2U31_RS20730	SM00490	helicase superfamily c-terminal domain
C2U31_RS20775	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS20810	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS20810	SM00448	cheY-homologous receiver domain
C2U31_RS20815	SM00091	PAS domain
C2U31_RS20815	SM00387	Histidine kinase-like ATPases
C2U31_RS20815	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_RS20825	SM01230	C2U31_RS20825
C2U31_RS20830	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2U31_RS20840	SM00052	Putative diguanylate phosphodiesterase
C2U31_RS20840	SM00267	diguanylate cyclase
C2U31_RS20845	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U31_RS20845	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_RS20885	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS20940	SM00822	C2U31_RS20940
C2U31_RS20955	SM00072	Guanylate kinase homologues.
C2U31_RS20960	SM01409	C2U31_RS20960
C2U31_RS20965	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C2U31_RS20965	SM00954	Region found in RelA / SpoT proteins
C2U31_RS20995	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS21005	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_RS21005	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
C2U31_RS21050	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS21055	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS21135	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS21150	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS21185	SM01150	C2U31_RS21185
C2U31_RS21215	SM00422	helix_turn_helix, mercury resistance
C2U31_RS21240	SM00257	Lysin motif
C2U31_RS21255	SM01207	C2U31_RS21255
C2U31_RS21285	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_RS21300	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS21310	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS21400	SM00344	helix_turn_helix ASNC type
C2U31_RS21455	SM00862	Transcriptional regulatory protein, C terminal
C2U31_RS21485	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS21490	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS21495	SM00420	helix_turn_helix, Deoxyribose operon repressor
C2U31_RS21495	SM01134	C2U31_RS21495
C2U31_RS21510	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C2U31_RS21520	SM00862	Transcriptional regulatory protein, C terminal
C2U31_RS21555	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C2U31_RS21575	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U31_RS21615	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS21620	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS21655	SM00419	helix_turn_helix, cAMP Regulatory protein
C2U31_RS21715	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS21720	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS21730	SM00822	C2U31_RS21730
C2U31_RS21770	SM00481	DNA polymerase alpha chain like domain
C2U31_RS21795	SM00464	Found in ATP-dependent protease La (LON)
C2U31_RS21810	SM01012	C2U31_RS21810
C2U31_RS21820	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS21825	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS21855	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_RS21905	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS21960	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS21970	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_RS22010	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U31_RS22080	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_RS22095	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS22100	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_RS22175	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS22175	SM00895	C2U31_RS22175
C2U31_RS22200	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U31_RS22225	SM00344	helix_turn_helix ASNC type
C2U31_RS22235	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS22250	SM00267	diguanylate cyclase
C2U31_RS22250	SM00448	cheY-homologous receiver domain
C2U31_RS22255	SM00448	cheY-homologous receiver domain
C2U31_RS22260	SM00073	Histidine Phosphotransfer domain
C2U31_RS22260	SM00260	Two component signalling adaptor domain
C2U31_RS22260	SM00387	Histidine kinase-like ATPases
C2U31_RS22260	SM00448	cheY-homologous receiver domain
C2U31_RS22265	SM00260	Two component signalling adaptor domain
C2U31_RS22270	SM00138	Methyltransferase, chemotaxis proteins 
C2U31_RS22275	SM00260	Two component signalling adaptor domain
C2U31_RS22280	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U31_RS22280	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_RS22305	SM00491	C2U31_RS22305
C2U31_RS22310	SM00990	C2U31_RS22310
C2U31_RS22355	SM00822	C2U31_RS22355
C2U31_RS22365	SM00881	CoA binding domain
C2U31_RS22465	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS22490	SM00895	C2U31_RS22490
C2U31_RS22530	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_RS22560	SM00478	endonuclease III
C2U31_RS22645	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS22670	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS22670	SM00895	C2U31_RS22670
C2U31_RS22730	SM00829	Enoylreductase
C2U31_RS22735	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C2U31_RS22745	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_RS22810	SM00116	Domain in cystathionine beta-synthase and other proteins.
C2U31_RS22810	SM01240	C2U31_RS22810
C2U31_RS22835	SM00052	Putative diguanylate phosphodiesterase
C2U31_RS22840	SM00267	diguanylate cyclase
C2U31_RS22870	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS22875	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS22940	SM00869	Autotransporter beta-domain
C2U31_RS22990	SM00267	diguanylate cyclase
C2U31_RS23000	SM00477	DNA/RNA non-specific endonuclease
C2U31_RS23000	SM00892	DNA/RNA non-specific endonuclease
C2U31_RS23020	SM01130	C2U31_RS23020
C2U31_RS23025	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS23025	SM00895	C2U31_RS23025
C2U31_RS23045	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS23060	SM00507	HNH nucleases
C2U31_RS23075	SM00869	Autotransporter beta-domain
C2U31_RS23115	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U31_RS23115	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_RS23120	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_RS23135	SM01211	C2U31_RS23135
C2U31_RS23175	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS23190	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS23200	SM00344	helix_turn_helix ASNC type
C2U31_RS23215	SM00822	C2U31_RS23215
C2U31_RS23235	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS23235	SM00866	C2U31_RS23235
C2U31_RS23260	SM00822	C2U31_RS23260
C2U31_RS23280	SM00052	Putative diguanylate phosphodiesterase
C2U31_RS23280	SM00091	PAS domain
C2U31_RS23280	SM00267	diguanylate cyclase
C2U31_RS23295	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS23295	SM00895	C2U31_RS23295
C2U31_RS23315	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS23335	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
C2U31_RS23395	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U31_RS23425	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C2U31_RS23440	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS23480	SM00028	Tetratricopeptide repeats
C2U31_RS23505	SM00422	helix_turn_helix, mercury resistance
C2U31_RS23525	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C2U31_RS23540	SM00986	Uracil DNA glycosylase superfamily
C2U31_RS23540	SM00987	UreE urease accessory protein, C-terminal domain 
C2U31_RS23555	SM00481	DNA polymerase alpha chain like domain
C2U31_RS23590	SM00903	Flavin reductase like domain
C2U31_RS23610	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS23615	SM00849	Metallo-beta-lactamase superfamily
C2U31_RS23635	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS23660	SM00448	cheY-homologous receiver domain
C2U31_RS23660	SM00862	Transcriptional regulatory protein, C terminal
C2U31_RS23665	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_RS23665	SM00387	Histidine kinase-like ATPases
C2U31_RS23665	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_RS23680	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS23710	SM00822	C2U31_RS23710
C2U31_RS23725	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS23750	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS23770	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS23815	SM00271	DnaJ molecular chaperone homology domain
C2U31_RS23840	SM00226	Low molecular weight phosphatase family
C2U31_RS23845	SM00487	DEAD-like helicases superfamily
C2U31_RS23845	SM00490	helicase superfamily c-terminal domain
C2U31_RS23860	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS23860	SM00464	Found in ATP-dependent protease La (LON)
C2U31_RS23865	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS23865	SM00994	ClpX C4-type zinc finger
C2U31_RS23865	SM01086	C-terminal, D2-small domain, of ClpB protein
C2U31_RS23895	SM00357	Cold shock protein domain
C2U31_RS23905	SM00357	Cold shock protein domain
C2U31_RS23935	SM01119	C2U31_RS23935
C2U31_RS24020	SM01230	C2U31_RS24020
C2U31_RS24025	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS24070	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS24085	SM00965	Secretin and TonB N terminus short domain
C2U31_RS24095	SM00830	Chorismate mutase type II
C2U31_RS24130	SM00904	Riboflavin kinase
C2U31_RS24160	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_RS24165	SM00421	helix_turn_helix, Lux Regulon
C2U31_RS24165	SM00448	cheY-homologous receiver domain
C2U31_RS24175	SM00912	haemagglutination activity domain
C2U31_RS24230	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS24245	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_RS24295	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS24300	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS24340	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS24340	SM01086	C-terminal, D2-small domain, of ClpB protein
C2U31_RS24350	SM01359	C2U31_RS24350
C2U31_RS24350	SM01360	C2U31_RS24350
C2U31_RS24360	SM00357	Cold shock protein domain
C2U31_RS24380	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U31_RS24380	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_RS24390	SM00248	ankyrin repeats
C2U31_RS24435	SM00822	C2U31_RS24435
C2U31_RS24480	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS24480	SM00895	C2U31_RS24480
C2U31_RS24485	SM01130	C2U31_RS24485
C2U31_RS24490	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS24510	SM00878	Biotin carboxylase C-terminal domain
C2U31_RS24525	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS24545	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS24555	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U31_RS24590	SM00822	C2U31_RS24590
C2U31_RS24595	SM01005	Alanine racemase, C-terminal domain
C2U31_RS24700	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS24700	SM00895	C2U31_RS24700
C2U31_RS24705	SM01007	Class II Aldolase and Adducin N-terminal domain
C2U31_RS24725	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS24745	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS24745	SM01086	C-terminal, D2-small domain, of ClpB protein
C2U31_RS24755	SM00100	Cyclic nucleotide-monophosphate binding domain
C2U31_RS24755	SM00419	helix_turn_helix, cAMP Regulatory protein
C2U31_RS24780	SM00829	Enoylreductase
C2U31_RS24805	SM00421	helix_turn_helix, Lux Regulon
C2U31_RS24805	SM00448	cheY-homologous receiver domain
C2U31_RS24810	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2U31_RS24825	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS24825	SM00895	C2U31_RS24825
C2U31_RS24865	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS24885	SM00354	helix_turn _helix lactose operon repressor
C2U31_RS24915	SM00091	PAS domain
C2U31_RS24915	SM00267	diguanylate cyclase
C2U31_RS24965	SM00257	Lysin motif
C2U31_RS24970	SM00859	Semialdehyde dehydrogenase, NAD binding domain
C2U31_RS24975	SM01329	C2U31_RS24975
C2U31_RS25000	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS25010	SM00421	helix_turn_helix, Lux Regulon
C2U31_RS25015	SM00327	von Willebrand factor (vWF) type A domain
C2U31_RS25025	SM00052	Putative diguanylate phosphodiesterase
C2U31_RS25025	SM00267	diguanylate cyclase
C2U31_RS25055	SM00052	Putative diguanylate phosphodiesterase
C2U31_RS25055	SM00267	diguanylate cyclase
C2U31_RS25060	SM00052	Putative diguanylate phosphodiesterase
C2U31_RS25060	SM00267	diguanylate cyclase
C2U31_RS25065	SM00387	Histidine kinase-like ATPases
C2U31_RS25065	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_RS25070	SM00448	cheY-homologous receiver domain
C2U31_RS25070	SM00862	Transcriptional regulatory protein, C terminal
C2U31_RS25090	SM00116	Domain in cystathionine beta-synthase and other proteins.
C2U31_RS25120	SM00240	Forkhead associated domain
C2U31_RS25130	SM00858	C2U31_RS25130
C2U31_RS25160	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C2U31_RS25170	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS25175	SM00450	Rhodanese Homology Domain
C2U31_RS25185	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_RS25185	SM00387	Histidine kinase-like ATPases
C2U31_RS25185	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_RS25195	SM00387	Histidine kinase-like ATPases
C2U31_RS25195	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_RS25200	SM00448	cheY-homologous receiver domain
C2U31_RS25200	SM00862	Transcriptional regulatory protein, C terminal
C2U31_RS25300	SM00400	zinc finger
C2U31_RS25300	SM00493	C2U31_RS25300
C2U31_RS25300	SM00766	DNA primase DnaG DnaB-binding
C2U31_RS25315	SM00354	helix_turn _helix lactose operon repressor
C2U31_RS25340	SM00788	Adenylosuccinate synthetase
C2U31_RS25350	SM00244	prohibitin homologues
C2U31_RS25355	SM00244	prohibitin homologues
C2U31_RS25375	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS25380	SM00564	beta-propeller repeat
C2U31_RS25410	SM00562	C2U31_RS25410
C2U31_RS25440	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
C2U31_RS25500	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U31_RS25525	SM00434	DNA Topoisomerase IV
C2U31_RS25535	SM00387	Histidine kinase-like ATPases
C2U31_RS25535	SM00433	TopoisomeraseII
C2U31_RS25545	SM00357	Cold shock protein domain
C2U31_RS25545	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS25545	SM00959	Rho termination factor, N-terminal domain
C2U31_RS25555	SM00989	C2U31_RS25555
C2U31_RS25590	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS25605	SM00421	helix_turn_helix, Lux Regulon
C2U31_RS25625	SM00849	Metallo-beta-lactamase superfamily
C2U31_RS25665	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS25705	SM00829	Enoylreductase
C2U31_RS25720	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U31_RS25745	SM01329	C2U31_RS25745
C2U31_RS25760	SM01209	C2U31_RS25760
C2U31_RS25760	SM01210	C2U31_RS25760
C2U31_RS25795	SM00387	Histidine kinase-like ATPases
C2U31_RS25795	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_RS25800	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS25800	SM00448	cheY-homologous receiver domain
C2U31_RS25840	SM00841	Elongation factor P, C-terminal
C2U31_RS25840	SM01185	C2U31_RS25840
C2U31_RS25855	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS25870	SM00028	Tetratricopeptide repeats
C2U31_RS25900	SM00858	C2U31_RS25900
C2U31_RS25945	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U31_RS25950	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS25970	SM00318	Staphylococcal nuclease homologues
C2U31_RS26015	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS26130	SM00421	helix_turn_helix, Lux Regulon
C2U31_RS26135	SM00421	helix_turn_helix, Lux Regulon
C2U31_RS26205	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U31_RS26210	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS26220	SM00882	Coenzyme A transferase
C2U31_RS26225	SM00882	Coenzyme A transferase
C2U31_RS26250	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_RS26270	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_RS26335	SM00478	endonuclease III
C2U31_RS26340	SM00840	C2U31_RS26340
C2U31_RS26370	SM01091	Transporter associated domain
C2U31_RS26380	SM00900	C2U31_RS26380
C2U31_RS26390	SM00710	Parallel beta-helix repeats
C2U31_RS26390	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
C2U31_RS26395	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS26430	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_RS26505	SM00829	Enoylreductase
C2U31_RS26615	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
C2U31_RS26615	SM00534	ATPase domain of DNA mismatch repair MUTS family
C2U31_RS26620	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
C2U31_RS26635	SM01130	C2U31_RS26635
C2U31_RS26675	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C2U31_RS26730	SM00155	Phospholipase D. Active site motifs.
C2U31_RS26760	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C2U31_RS26765	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS26785	SM00869	Autotransporter beta-domain
C2U31_RS26835	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_RS26855	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_RS26860	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS26920	SM00560	LamG-like jellyroll fold domain
C2U31_RS26930	SM00912	haemagglutination activity domain
C2U31_RS26945	SM00965	Secretin and TonB N terminus short domain
C2U31_RS26960	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_RS26965	SM01007	Class II Aldolase and Adducin N-terminal domain
C2U31_RS26980	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS26995	SM00098	Alkaline phosphatase homologues
C2U31_RS27000	SM00098	Alkaline phosphatase homologues
C2U31_RS27045	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U31_RS27090	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS27095	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS27100	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C2U31_RS27190	SM00448	cheY-homologous receiver domain
C2U31_RS27190	SM00862	Transcriptional regulatory protein, C terminal
C2U31_RS27265	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS27280	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_RS27280	SM00387	Histidine kinase-like ATPases
C2U31_RS27280	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_RS27285	SM00448	cheY-homologous receiver domain
C2U31_RS27285	SM00862	Transcriptional regulatory protein, C terminal
C2U31_RS27305	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS27330	SM00965	Secretin and TonB N terminus short domain
C2U31_RS27345	SM00861	Transketolase, pyrimidine binding domain
C2U31_RS27355	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS27355	SM00895	C2U31_RS27355
C2U31_RS27365	SM00822	C2U31_RS27365
C2U31_RS27380	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS27385	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS27390	SM00829	Enoylreductase
C2U31_RS27435	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
C2U31_RS27440	SM00028	Tetratricopeptide repeats
C2U31_RS27460	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS27465	SM01119	C2U31_RS27465
C2U31_RS27480	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS27485	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_RS27500	SM00354	helix_turn _helix lactose operon repressor
C2U31_RS27530	SM00710	Parallel beta-helix repeats
C2U31_RS27530	SM00869	Autotransporter beta-domain
C2U31_RS27560	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS27560	SM00895	C2U31_RS27560
C2U31_RS27565	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS27585	SM00344	helix_turn_helix ASNC type
C2U31_RS27600	SM00052	Putative diguanylate phosphodiesterase
C2U31_RS27605	SM00267	diguanylate cyclase
C2U31_RS27650	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS27695	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS27705	SM01103	C2U31_RS27705
C2U31_RS27715	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U31_RS27715	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_RS27735	SM00855	Phosphoglycerate mutase family
C2U31_RS27740	SM00822	C2U31_RS27740
C2U31_RS27750	SM00851	MGS-like domain
C2U31_RS27750	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
C2U31_RS27755	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
C2U31_RS27775	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS27790	SM00493	C2U31_RS27790
C2U31_RS27800	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS27850	SM00829	Enoylreductase
C2U31_RS27900	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS27910	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_RS27910	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
C2U31_RS27920	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_RS27925	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_RS28010	SM00479	C2U31_RS28010
C2U31_RS28020	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
C2U31_RS28020	SM00091	PAS domain
C2U31_RS28020	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U31_RS28025	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS28035	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS28055	SM00116	Domain in cystathionine beta-synthase and other proteins.
C2U31_RS28105	SM01001	AIR carboxylase
C2U31_RS28155	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS28160	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS28185	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS28185	SM00866	C2U31_RS28185
C2U31_RS28200	SM00072	Guanylate kinase homologues.
C2U31_RS28215	SM00857	Resolvase, N terminal domain
C2U31_RS28270	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS28280	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C2U31_RS28290	SM00316	Ribosomal protein S1-like RNA-binding domain
C2U31_RS28310	SM00852	Probable molybdopterin binding domain
C2U31_RS28340	SM00271	DnaJ molecular chaperone homology domain
C2U31_RS28395	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
C2U31_RS28400	SM00861	Transketolase, pyrimidine binding domain
C2U31_RS28425	SM00919	Malic enzyme, NAD binding domain
C2U31_RS28425	SM01274	C2U31_RS28425
C2U31_RS28490	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C2U31_RS28505	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS28520	SM00448	cheY-homologous receiver domain
C2U31_RS28520	SM01012	C2U31_RS28520
C2U31_RS28545	SM00903	Flavin reductase like domain
C2U31_RS28555	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_RS28570	SM01323	C2U31_RS28570
C2U31_RS28605	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
C2U31_RS28610	SM00014	Acid phosphatase homologues
C2U31_RS28615	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2U31_RS28630	SM01091	Transporter associated domain
C2U31_RS28675	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2U31_RS28675	SM00876	Biotin and Thiamin Synthesis associated domain
C2U31_RS28725	SM00852	Probable molybdopterin binding domain
C2U31_RS28730	SM00852	Probable molybdopterin binding domain
C2U31_RS28740	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2U31_RS28755	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
C2U31_RS28760	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C2U31_RS28760	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
C2U31_RS28825	SM00387	Histidine kinase-like ATPases
C2U31_RS28830	SM00448	cheY-homologous receiver domain
C2U31_RS28830	SM00862	Transcriptional regulatory protein, C terminal
C2U31_RS28905	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS28905	SM00895	C2U31_RS28905
C2U31_RS28910	SM00796	Allophanate hydrolase subunit 1
C2U31_RS28910	SM00797	Allophanate hydrolase subunit 2
C2U31_RS28910	SM00878	Biotin carboxylase C-terminal domain
C2U31_RS28940	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS28965	SM00421	helix_turn_helix, Lux Regulon
C2U31_RS28965	SM00448	cheY-homologous receiver domain
C2U31_RS28970	SM00387	Histidine kinase-like ATPases
C2U31_RS28975	SM00014	Acid phosphatase homologues
C2U31_RS28985	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS28985	SM00478	endonuclease III
C2U31_RS28985	SM01009	AlkA N-terminal domain
C2U31_RS28995	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS29015	SM00965	Secretin and TonB N terminus short domain
C2U31_RS29080	SM00344	helix_turn_helix ASNC type
C2U31_RS29095	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_RS29105	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS29130	SM00257	Lysin motif
C2U31_RS29165	SM00387	Histidine kinase-like ATPases
C2U31_RS29170	SM00448	cheY-homologous receiver domain
C2U31_RS29230	SM00919	Malic enzyme, NAD binding domain
C2U31_RS29230	SM01274	C2U31_RS29230
C2U31_RS29240	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS29250	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U31_RS29265	SM00822	C2U31_RS29265
C2U31_RS29285	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_RS29290	SM00155	Phospholipase D. Active site motifs.
C2U31_RS29345	SM00052	Putative diguanylate phosphodiesterase
C2U31_RS29350	SM00244	prohibitin homologues
C2U31_RS29365	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS29400	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS29485	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS29495	SM00248	ankyrin repeats
C2U31_RS29540	SM00387	Histidine kinase-like ATPases
C2U31_RS29540	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_RS29540	SM00448	cheY-homologous receiver domain
C2U31_RS29545	SM00052	Putative diguanylate phosphodiesterase
C2U31_RS29545	SM00448	cheY-homologous receiver domain
C2U31_RS29550	SM00387	Histidine kinase-like ATPases
C2U31_RS29550	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_RS29550	SM00448	cheY-homologous receiver domain
C2U31_RS29555	SM00421	helix_turn_helix, Lux Regulon
C2U31_RS29555	SM00448	cheY-homologous receiver domain
C2U31_RS29645	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U31_RS29645	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_RS29650	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U31_RS29650	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_RS29670	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS29670	SM00895	C2U31_RS29670
C2U31_RS29675	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_RS29730	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_RS29745	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS29760	SM00422	helix_turn_helix, mercury resistance
C2U31_RS29765	SM00422	helix_turn_helix, mercury resistance
C2U31_RS29815	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS29870	SM00421	helix_turn_helix, Lux Regulon
C2U31_RS29870	SM00448	cheY-homologous receiver domain
C2U31_RS29885	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS29905	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS29910	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS29940	SM00869	Autotransporter beta-domain
C2U31_RS29960	SM00886	Stress responsive A/B Barrel Domain
C2U31_RS30015	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
C2U31_RS30020	SM00421	helix_turn_helix, Lux Regulon
C2U31_RS30020	SM00448	cheY-homologous receiver domain
C2U31_RS30025	SM00387	Histidine kinase-like ATPases
C2U31_RS30025	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_RS30025	SM00448	cheY-homologous receiver domain
C2U31_RS30040	SM00100	Cyclic nucleotide-monophosphate binding domain
C2U31_RS30040	SM00419	helix_turn_helix, cAMP Regulatory protein
C2U31_RS30060	SM00869	Autotransporter beta-domain
C2U31_RS30080	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_RS30080	SM00895	C2U31_RS30080
C2U31_RS30105	SM00912	haemagglutination activity domain
C2U31_RS30120	SM00965	Secretin and TonB N terminus short domain
C2U31_RS30150	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
C2U31_RS30175	SM01400	C2U31_RS30175
C2U31_RS30210	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS30225	SM00382	ATPases associated with a variety of cellular activities
C2U31_RS30235	SM00822	C2U31_RS30235
C2U31_RS30240	SM00882	Coenzyme A transferase
C2U31_RS30245	SM00882	Coenzyme A transferase
C2U31_RS30250	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_RS30265	SM00883	Chaperonin 10 Kd subunit
C2U31_RS30300	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
