locus-tag	class	description
AL504_RS00025	PF16527	Two-component sensor protein CpxA, periplasmic domain
AL504_RS00025	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS00025	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS00025	PF00672	HAMP domain
AL504_RS00120	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS00120	PF07660	Secretin and TonB N terminus short domain
AL504_RS00120	PF00593	TonB dependent receptor
AL504_RS00140	PF02687	FtsX-like permease family
AL504_RS00140	PF12704	MacB-like periplasmic core domain
AL504_RS00145	PF00005	ABC transporter
AL504_RS00150	PF01026	TatD related DNase
AL504_RS00155	PF16750	Sensor domain of 2-component histidine kinase
AL504_RS00155	PF00672	HAMP domain
AL504_RS00155	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS00155	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS00160	PF00486	Transcriptional regulatory protein, C terminal
AL504_RS00160	PF00072	Response regulator receiver domain
AL504_RS00165	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS00165	PF00593	TonB dependent receptor
AL504_RS00170	PF01497	Periplasmic binding protein
AL504_RS00175	PF01032	FecCD transport family
AL504_RS00180	PF01032	FecCD transport family
AL504_RS00185	PF00005	ABC transporter
AL504_RS00190	PF00593	TonB dependent receptor
AL504_RS00190	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS00195	PF02110	Hydroxyethylthiazole kinase family
AL504_RS00205	PF04542	Sigma-70 region 2 
AL504_RS00205	PF08281	Sigma-70, region 4
AL504_RS00215	PF00593	TonB dependent receptor
AL504_RS00215	PF07660	Secretin and TonB N terminus short domain
AL504_RS00215	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS00235	PF01613	Flavin reductase like domain
AL504_RS00240	PF00005	ABC transporter
AL504_RS00250	PF00106	short chain dehydrogenase
AL504_RS00260	PF00884	Sulfatase
AL504_RS00280	PF13519	von Willebrand factor type A domain
AL504_RS00300	PF17863	AAA lid domain
AL504_RS00300	PF07726	ATPase family associated with various cellular activities (AAA)
AL504_RS00305	PF03781	Sulfatase-modifying factor enzyme 1
AL504_RS00335	PF01381	Helix-turn-helix
AL504_RS00340	PF02656	Domain of unknown function (DUF202)
AL504_RS00345	PF02656	Domain of unknown function (DUF202)
AL504_RS00355	PF00171	Aldehyde dehydrogenase family
AL504_RS00360	PF00355	Rieske [2Fe-2S] domain
AL504_RS00365	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL504_RS00370	PF00732	GMC oxidoreductase
AL504_RS00370	PF05199	GMC oxidoreductase
AL504_RS00375	PF07702	UTRA domain
AL504_RS00375	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS00380	PF00884	Sulfatase
AL504_RS00390	PF09330	D-lactate dehydrogenase, membrane binding
AL504_RS00390	PF01565	FAD binding domain 
AL504_RS00395	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS00395	PF03466	LysR substrate binding domain
AL504_RS00400	PF00291	Pyridoxal-phosphate dependent enzyme
AL504_RS00405	PF00290	Tryptophan synthase alpha chain
AL504_RS00415	PF01546	Peptidase family M20/M25/M40
AL504_RS00415	PF07687	Peptidase dimerisation domain
AL504_RS00420	PF07690	Major Facilitator Superfamily
AL504_RS00420	PF00083	Sugar (and other) transporter
AL504_RS00425	PF03466	LysR substrate binding domain
AL504_RS00425	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS00430	PF03544	Gram-negative bacterial TonB protein C-terminal
AL504_RS00435	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS00435	PF03466	LysR substrate binding domain
AL504_RS00440	PF05199	GMC oxidoreductase
AL504_RS00440	PF00732	GMC oxidoreductase
AL504_RS00465	PF02811	PHP domain
AL504_RS00470	PF01272	Transcription elongation factor, GreA/GreB, C-term
AL504_RS00470	PF03449	Transcription elongation factor, N-terminal
AL504_RS00500	PF03480	Bacterial extracellular solute-binding protein, family 7
AL504_RS00505	PF04290	Tripartite ATP-independent periplasmic transporters, DctQ component
AL504_RS00505	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
AL504_RS00515	PF18072	Formylglycinamide ribonucleotide amidotransferase linker domain
AL504_RS00515	PF02769	AIR synthase related protein, C-terminal domain
AL504_RS00515	PF18076	Formylglycinamide ribonucleotide amidotransferase N-terminal
AL504_RS00520	PF02203	Tar ligand binding domain homologue
AL504_RS00520	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL504_RS00520	PF00672	HAMP domain
AL504_RS00535	PF00486	Transcriptional regulatory protein, C terminal
AL504_RS00535	PF00072	Response regulator receiver domain
AL504_RS00540	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS00540	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS00540	PF08521	Two-component sensor kinase N-terminal
AL504_RS00545	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS00555	PF03466	LysR substrate binding domain
AL504_RS00555	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS00570	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
AL504_RS00585	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS00590	PF00701	Dihydrodipicolinate synthetase family
AL504_RS00595	PF03466	LysR substrate binding domain
AL504_RS00595	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS00600	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS00625	PF00072	Response regulator receiver domain
AL504_RS00625	PF00486	Transcriptional regulatory protein, C terminal
AL504_RS00630	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL504_RS00630	PF00072	Response regulator receiver domain
AL504_RS00630	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS00630	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS00635	PF03466	LysR substrate binding domain
AL504_RS00635	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS00640	PF07690	Major Facilitator Superfamily
AL504_RS00650	PF00440	Bacterial regulatory proteins, tetR family
AL504_RS00670	PF02133	Permease for cytosine/purines, uracil, thiamine, allantoin
AL504_RS00680	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
AL504_RS00685	PF07690	Major Facilitator Superfamily
AL504_RS00725	PF03466	LysR substrate binding domain
AL504_RS00725	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS00740	PF00593	TonB dependent receptor
AL504_RS00740	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS00745	PF00211	Adenylate and Guanylate cyclase catalytic domain
AL504_RS00755	PF02627	Carboxymuconolactone decarboxylase family
AL504_RS00760	PF00990	Diguanylate cyclase, GGDEF domain
AL504_RS00760	PF07694	5TMR of 5TMR-LYT
AL504_RS00770	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS00770	PF00593	TonB dependent receptor
AL504_RS00790	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS00795	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS00800	PF01613	Flavin reductase like domain
AL504_RS00815	PF04909	Amidohydrolase
AL504_RS00820	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS00820	PF03466	LysR substrate binding domain
AL504_RS00825	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS00830	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL504_RS00830	PF02770	Acyl-CoA dehydrogenase, middle domain
AL504_RS00830	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL504_RS00835	PF02515	CoA-transferase family III
AL504_RS00840	PF00378	Enoyl-CoA hydratase/isomerase
AL504_RS00845	PF02515	CoA-transferase family III
AL504_RS00850	PF01070	FMN-dependent dehydrogenase
AL504_RS00870	PF00593	TonB dependent receptor
AL504_RS00870	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS00895	PF12833	Helix-turn-helix domain
AL504_RS00895	PF12852	Cupin
AL504_RS00900	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS00900	PF00593	TonB dependent receptor
AL504_RS00940	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS00945	PF02615	Malate/L-lactate dehydrogenase
AL504_RS00950	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS00955	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS00955	PF03466	LysR substrate binding domain
AL504_RS00970	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL504_RS00975	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL504_RS00975	PF00005	ABC transporter
AL504_RS00980	PF00005	ABC transporter
AL504_RS00980	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL504_RS00985	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS00985	PF12911	N-terminal TM domain of oligopeptide transport permease C
AL504_RS00990	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS00995	PF13454	FAD-NAD(P)-binding
AL504_RS01000	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS01000	PF03466	LysR substrate binding domain
AL504_RS01005	PF18146	Damage-inducible protein CinA KH domain
AL504_RS01005	PF00994	Probable molybdopterin binding domain
AL504_RS01005	PF02464	Competence-damaged protein
AL504_RS01020	PF03797	Autotransporter beta-domain
AL504_RS01030	PF01425	Amidase
AL504_RS01035	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS01040	PF00291	Pyridoxal-phosphate dependent enzyme
AL504_RS01045	PF03466	LysR substrate binding domain
AL504_RS01045	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS01070	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AL504_RS01070	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL504_RS01075	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS01080	PF03466	LysR substrate binding domain
AL504_RS01080	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS01100	PF16168	Adhesin of bacterial autotransporter system, probable stalk 
AL504_RS01100	PF13018	Extended Signal Peptide of Type V secretion system
AL504_RS01100	PF03797	Autotransporter beta-domain
AL504_RS01110	PF00478	IMP dehydrogenase / GMP reductase domain
AL504_RS01110	PF00571	CBS domain
AL504_RS01115	PF00117	Glutamine amidotransferase class-I
AL504_RS01115	PF00958	GMP synthase C terminal domain
AL504_RS01115	PF02540	NAD synthase
AL504_RS01120	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS01120	PF00593	TonB dependent receptor
AL504_RS01130	PF04183	IucA / IucC family
AL504_RS01130	PF06276	Ferric iron reductase FhuF-like transporter
AL504_RS01140	PF07690	Major Facilitator Superfamily
AL504_RS01145	PF03466	LysR substrate binding domain
AL504_RS01145	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS01170	PF00107	Zinc-binding dehydrogenase
AL504_RS01170	PF08240	Alcohol dehydrogenase GroES-like domain
AL504_RS01180	PF00106	short chain dehydrogenase
AL504_RS01190	PF16197	Ketoacyl-synthetase C-terminal extension
AL504_RS01190	PF02801	Beta-ketoacyl synthase, C-terminal domain
AL504_RS01190	PF08659	KR domain
AL504_RS01190	PF00550	Phosphopantetheine attachment site
AL504_RS01190	PF14765	Polyketide synthase dehydratase
AL504_RS01190	PF00109	Beta-ketoacyl synthase, N-terminal domain
AL504_RS01190	PF08240	Alcohol dehydrogenase GroES-like domain
AL504_RS01190	PF00698	Acyl transferase domain
AL504_RS01205	PF12802	MarR family
AL504_RS01225	PF12833	Helix-turn-helix domain
AL504_RS01225	PF06719	AraC-type transcriptional regulator N-terminus
AL504_RS01230	PF00106	short chain dehydrogenase
AL504_RS01245	PF00561	alpha/beta hydrolase fold
AL504_RS01250	PF00106	short chain dehydrogenase
AL504_RS01260	PF03466	LysR substrate binding domain
AL504_RS01260	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS01265	PF01979	Amidohydrolase family
AL504_RS01270	PF07690	Major Facilitator Superfamily
AL504_RS01295	PF12833	Helix-turn-helix domain
AL504_RS01295	PF02311	AraC-like ligand binding domain
AL504_RS01315	PF01494	FAD binding domain
AL504_RS01320	PF00440	Bacterial regulatory proteins, tetR family
AL504_RS01320	PF02909	Tetracyclin repressor-like, C-terminal domain
AL504_RS01335	PF09278	MerR, DNA binding
AL504_RS01335	PF00376	MerR family regulatory protein
AL504_RS01340	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS01340	PF03466	LysR substrate binding domain
AL504_RS01350	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS01350	PF03466	LysR substrate binding domain
AL504_RS01355	PF14698	Argininosuccinate lyase C-terminal
AL504_RS01355	PF00206	Lyase
AL504_RS01360	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS01365	PF00583	Acetyltransferase (GNAT) family
AL504_RS01365	PF00814	Glycoprotease family
AL504_RS01370	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS01370	PF03466	LysR substrate binding domain
AL504_RS01380	PF03466	LysR substrate binding domain
AL504_RS01380	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS01385	PF07690	Major Facilitator Superfamily
AL504_RS01390	PF01791	DeoC/LacD family aldolase
AL504_RS01395	PF00248	Aldo/keto reductase family
AL504_RS01400	PF02653	Branched-chain amino acid transport system / permease component
AL504_RS01405	PF00005	ABC transporter
AL504_RS01415	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
AL504_RS01415	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
AL504_RS01420	PF01266	FAD dependent oxidoreductase
AL504_RS01420	PF16901	C-terminal domain of alpha-glycerophosphate oxidase
AL504_RS01425	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS01425	PF07702	UTRA domain
AL504_RS01435	PF13618	Gluconate 2-dehydrogenase subunit 3
AL504_RS01440	PF00732	GMC oxidoreductase
AL504_RS01440	PF05199	GMC oxidoreductase
AL504_RS01445	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
AL504_RS01445	PF00034	Cytochrome c
AL504_RS01460	PF00583	Acetyltransferase (GNAT) family
AL504_RS01470	PF18081	Fanconi anemia-associated nuclease SAP domain 
AL504_RS01470	PF08774	VRR-NUC domain
AL504_RS01475	PF06733	DEAD_2
AL504_RS01475	PF13307	Helicase C-terminal domain
AL504_RS01485	PF07690	Major Facilitator Superfamily
AL504_RS01505	PF12729	Four helix bundle sensory module for signal transduction
AL504_RS01505	PF00672	HAMP domain
AL504_RS01505	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL504_RS01515	PF01739	CheR methyltransferase, SAM binding domain
AL504_RS01525	PF00072	Response regulator receiver domain
AL504_RS01525	PF01627	Hpt domain
AL504_RS01525	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS01525	PF01584	CheW-like domain
AL504_RS01530	PF00072	Response regulator receiver domain
AL504_RS01530	PF01339	CheB methylesterase
AL504_RS01535	PF00360	Phytochrome region
AL504_RS01535	PF00990	Diguanylate cyclase, GGDEF domain
AL504_RS01535	PF01590	GAF domain
AL504_RS01535	PF00563	EAL domain
AL504_RS01540	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS01550	PF08402	TOBE domain
AL504_RS01550	PF00005	ABC transporter
AL504_RS01555	PF13609	Gram-negative porin
AL504_RS01560	PF01037	Lrp/AsnC ligand binding domain
AL504_RS01565	PF01053	Cys/Met metabolism PLP-dependent enzyme
AL504_RS01570	PF12804	MobA-like NTP transferase domain
AL504_RS01570	PF00132	Bacterial transferase hexapeptide (six repeats)
AL504_RS01580	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
AL504_RS01580	PF00034	Cytochrome c
AL504_RS01580	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
AL504_RS01585	PF00857	Isochorismatase family
AL504_RS01595	PF00561	alpha/beta hydrolase fold
AL504_RS01605	PF01799	[2Fe-2S] binding domain
AL504_RS01605	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL504_RS01615	PF07690	Major Facilitator Superfamily
AL504_RS01620	PF12802	MarR family
AL504_RS01625	PF07690	Major Facilitator Superfamily
AL504_RS01630	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS01630	PF00593	TonB dependent receptor
AL504_RS01640	PF07690	Major Facilitator Superfamily
AL504_RS01645	PF03466	LysR substrate binding domain
AL504_RS01645	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS01660	PF01546	Peptidase family M20/M25/M40
AL504_RS01660	PF07687	Peptidase dimerisation domain
AL504_RS01665	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS01670	PF03466	LysR substrate binding domain
AL504_RS01670	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS01675	PF00291	Pyridoxal-phosphate dependent enzyme
AL504_RS01680	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS01685	PF13193	AMP-binding enzyme C-terminal domain
AL504_RS01685	PF00501	AMP-binding enzyme
AL504_RS01690	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL504_RS01690	PF02770	Acyl-CoA dehydrogenase, middle domain
AL504_RS01690	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL504_RS01695	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL504_RS01695	PF02770	Acyl-CoA dehydrogenase, middle domain
AL504_RS01695	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL504_RS01700	PF02803	Thiolase, C-terminal domain
AL504_RS01700	PF00108	Thiolase, N-terminal domain
AL504_RS01705	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
AL504_RS01705	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
AL504_RS01705	PF00378	Enoyl-CoA hydratase/isomerase
AL504_RS01710	PF03466	LysR substrate binding domain
AL504_RS01710	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS01745	PF00113	Enolase, C-terminal TIM barrel domain
AL504_RS01745	PF03952	Enolase, N-terminal domain
AL504_RS01750	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS01750	PF03466	LysR substrate binding domain
AL504_RS01755	PF04286	Protein of unknown function (DUF445)
AL504_RS01760	PF00080	Copper/zinc superoxide dismutase (SODC)
AL504_RS01765	PF00043	Glutathione S-transferase, C-terminal domain
AL504_RS01765	PF13417	Glutathione S-transferase, N-terminal domain
AL504_RS01775	PF00557	Metallopeptidase family M24
AL504_RS01800	PF00691	OmpA family
AL504_RS01800	PF04972	BON domain
AL504_RS01810	PF06761	Intracellular multiplication and human macrophage-killing
AL504_RS01810	PF14331	ImcF-related N-terminal domain
AL504_RS01810	PF06744	Type VI secretion protein IcmF C-terminal
AL504_RS01830	PF10106	Uncharacterized protein conserved in bacteria (DUF2345)
AL504_RS01830	PF04717	Type VI secretion system, phage-baseplate injector
AL504_RS01830	PF13296	Putative type VI secretion system Rhs element Vgr
AL504_RS01875	PF05936	Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 
AL504_RS01890	PF05591	Type VI secretion system, VipA, VC_A0107 or Hcp2
AL504_RS01895	PF05943	Type VI secretion protein, EvpB/VC_A0108, tail sheath
AL504_RS01910	PF05947	Type VI secretion system, TssF
AL504_RS01920	PF00004	ATPase family associated with various cellular activities (AAA)
AL504_RS01920	PF07724	AAA domain (Cdc48 subfamily)
AL504_RS01920	PF17871	AAA lid domain
AL504_RS01920	PF10431	C-terminal, D2-small domain, of ClpB protein 
AL504_RS01925	PF04717	Type VI secretion system, phage-baseplate injector
AL504_RS01925	PF06715	Gp5 C-terminal repeat (3 copies)
AL504_RS01970	PF03055	Retinal pigment epithelial membrane protein
AL504_RS01980	PF13488	Glycine zipper
AL504_RS01980	PF00691	OmpA family
AL504_RS02010	PF02515	CoA-transferase family III
AL504_RS02015	PF00285	Citrate synthase, C-terminal domain
AL504_RS02025	PF03328	HpcH/HpaI aldolase/citrate lyase family
AL504_RS02030	PF01557	Fumarylacetoacetate (FAA) hydrolase family
AL504_RS02035	PF01557	Fumarylacetoacetate (FAA) hydrolase family
AL504_RS02040	PF04909	Amidohydrolase
AL504_RS02045	PF01042	Endoribonuclease L-PSP
AL504_RS02050	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS02055	PF01613	Flavin reductase like domain
AL504_RS02060	PF01614	Bacterial transcriptional regulator
AL504_RS02060	PF09339	IclR helix-turn-helix domain
AL504_RS02070	PF10127	RNA repair pathway DNA polymerase beta family
AL504_RS02075	PF01047	MarR family
AL504_RS02085	PF02798	Glutathione S-transferase, N-terminal domain
AL504_RS02085	PF00043	Glutathione S-transferase, C-terminal domain
AL504_RS02105	PF00583	Acetyltransferase (GNAT) family
AL504_RS02115	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS02115	PF03466	LysR substrate binding domain
AL504_RS02120	PF07690	Major Facilitator Superfamily
AL504_RS02125	PF13419	Haloacid dehalogenase-like hydrolase
AL504_RS02135	PF00892	EamA-like transporter family
AL504_RS02140	PF12833	Helix-turn-helix domain
AL504_RS02145	PF08281	Sigma-70, region 4
AL504_RS02145	PF04542	Sigma-70 region 2 
AL504_RS02155	PF03795	YCII-related domain
AL504_RS02160	PF03795	YCII-related domain
AL504_RS02165	PF01381	Helix-turn-helix
AL504_RS02165	PF06114	IrrE N-terminal-like domain
AL504_RS02165	PF09856	Predicted transcriptional regulator (DUF2083)
AL504_RS02175	PF00691	OmpA family
AL504_RS02175	PF05736	OprF membrane domain
AL504_RS02180	PF01618	MotA/TolQ/ExbB proton channel family
AL504_RS02195	PF12833	Helix-turn-helix domain
AL504_RS02195	PF02311	AraC-like ligand binding domain
AL504_RS02205	PF01571	Aminomethyltransferase folate-binding domain
AL504_RS02210	PF02618	YceG-like family
AL504_RS02215	PF02223	Thymidylate kinase
AL504_RS02220	PF12169	DNA polymerase III subunits gamma and tau domain III
AL504_RS02225	PF01026	TatD related DNase
AL504_RS02240	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL504_RS02245	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS02250	PF00005	ABC transporter
AL504_RS02255	PF00491	Arginase family
AL504_RS02260	PF08031	Berberine and berberine like 
AL504_RS02260	PF01565	FAD binding domain 
AL504_RS02265	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AL504_RS02265	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
AL504_RS02275	PF03099	Biotin/lipoate A/B protein ligase family
AL504_RS02275	PF10437	Bacterial lipoate protein ligase C-terminus
AL504_RS02290	PF02798	Glutathione S-transferase, N-terminal domain
AL504_RS02290	PF00043	Glutathione S-transferase, C-terminal domain
AL504_RS02300	PF01037	Lrp/AsnC ligand binding domain
AL504_RS02305	PF00255	Glutathione peroxidase
AL504_RS02310	PF07690	Major Facilitator Superfamily
AL504_RS02330	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS02330	PF03466	LysR substrate binding domain
AL504_RS02335	PF17042	Nucleotide-binding C-terminal domain
AL504_RS02335	PF07005	Sugar-binding N-terminal domain
AL504_RS02340	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
AL504_RS02350	PF08447	PAS fold
AL504_RS02350	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL504_RS02355	PF00875	DNA photolyase
AL504_RS02355	PF03441	FAD binding domain of DNA photolyase
AL504_RS02360	PF02515	CoA-transferase family III
AL504_RS02365	PF00578	AhpC/TSA family
AL504_RS02385	PF03880	DbpA RNA binding domain   
AL504_RS02385	PF00270	DEAD/DEAH box helicase
AL504_RS02385	PF00271	Helicase conserved C-terminal domain
AL504_RS02390	PF09339	IclR helix-turn-helix domain
AL504_RS02390	PF01614	Bacterial transcriptional regulator
AL504_RS02395	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AL504_RS02395	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AL504_RS02395	PF00205	Thiamine pyrophosphate enzyme, central domain
AL504_RS02400	PF01515	Phosphate acetyl/butaryl transferase
AL504_RS02410	PF01266	FAD dependent oxidoreductase
AL504_RS02430	PF00155	Aminotransferase class I and II
AL504_RS02430	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS02440	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS02445	PF00005	ABC transporter
AL504_RS02450	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
AL504_RS02455	PF01227	GTP cyclohydrolase I
AL504_RS02460	PF00196	Bacterial regulatory proteins, luxR family
AL504_RS02460	PF00072	Response regulator receiver domain
AL504_RS02465	PF17200	Single Cache domain 2
AL504_RS02465	PF07730	Histidine kinase
AL504_RS02470	PF02554	Carbon starvation protein CstA
AL504_RS02470	PF13722	5TM C-terminal transporter carbon starvation CstA
AL504_RS02475	PF04328	Selenoprotein, putative 
AL504_RS02480	PF00892	EamA-like transporter family
AL504_RS02485	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS02485	PF00155	Aminotransferase class I and II
AL504_RS02505	PF00210	Ferritin-like domain
AL504_RS02515	PF12951	Passenger-associated-transport-repeat
AL504_RS02520	PF01625	Peptide methionine sulfoxide reductase
AL504_RS02525	PF01641	SelR domain
AL504_RS02535	PF00174	Oxidoreductase molybdopterin binding domain
AL504_RS02540	PF01292	Prokaryotic cytochrome b561
AL504_RS02545	PF00486	Transcriptional regulatory protein, C terminal
AL504_RS02545	PF00072	Response regulator receiver domain
AL504_RS02550	PF18698	Histidine kinase sensor domain
AL504_RS02550	PF00672	HAMP domain
AL504_RS02550	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS02550	PF00989	PAS fold
AL504_RS02550	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS02555	PF03060	Nitronate monooxygenase
AL504_RS02570	PF00368	Hydroxymethylglutaryl-coenzyme A reductase
AL504_RS02575	PF00155	Aminotransferase class I and II
AL504_RS02575	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS02605	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS02610	PF07687	Peptidase dimerisation domain
AL504_RS02610	PF01546	Peptidase family M20/M25/M40
AL504_RS02615	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS02615	PF03466	LysR substrate binding domain
AL504_RS02620	PF00873	AcrB/AcrD/AcrF family
AL504_RS02625	PF00873	AcrB/AcrD/AcrF family
AL504_RS02630	PF13533	Biotin-lipoyl like
AL504_RS02635	PF03466	LysR substrate binding domain
AL504_RS02635	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS02640	PF01494	FAD binding domain
AL504_RS02655	PF07690	Major Facilitator Superfamily
AL504_RS02660	PF07690	Major Facilitator Superfamily
AL504_RS02670	PF14711	Respiratory nitrate reductase beta C-terminal
AL504_RS02670	PF13247	4Fe-4S dicluster domain
AL504_RS02675	PF02613	Nitrate reductase delta subunit
AL504_RS02680	PF02665	Nitrate reductase gamma subunit
AL504_RS02685	PF09312	SurA N-terminal domain
AL504_RS02685	PF00639	PPIC-type PPIASE domain
AL504_RS02690	PF04055	Radical SAM superfamily
AL504_RS02690	PF06463	Molybdenum Cofactor Synthesis C
AL504_RS02695	PF00484	Carbonic anhydrase
AL504_RS02700	PF03205	Molybdopterin guanine dinucleotide synthesis protein B
AL504_RS02705	PF13675	Type IV pili methyl-accepting chemotaxis transducer N-term
AL504_RS02705	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS02705	PF00672	HAMP domain
AL504_RS02705	PF07730	Histidine kinase
AL504_RS02710	PF00196	Bacterial regulatory proteins, luxR family
AL504_RS02710	PF00072	Response regulator receiver domain
AL504_RS02715	PF01136	Peptidase family U32
AL504_RS02720	PF01136	Peptidase family U32
AL504_RS02725	PF02036	SCP-2 sterol transfer family
AL504_RS02730	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS02735	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL504_RS02740	PF00266	Aminotransferase class-V
AL504_RS02745	PF01053	Cys/Met metabolism PLP-dependent enzyme
AL504_RS02750	PF00561	alpha/beta hydrolase fold
AL504_RS02770	PF00005	ABC transporter
AL504_RS02780	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS02800	PF07729	FCD domain
AL504_RS02800	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS02810	PF03737	Aldolase/RraA
AL504_RS02815	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS02820	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS02825	PF00701	Dihydrodipicolinate synthetase family
AL504_RS02830	PF07729	FCD domain
AL504_RS02830	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS02835	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS02840	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
AL504_RS02840	PF13378	Enolase C-terminal domain-like
AL504_RS02845	PF03466	LysR substrate binding domain
AL504_RS02845	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS02865	PF00664	ABC transporter transmembrane region
AL504_RS02865	PF08021	Siderophore-interacting FAD-binding domain
AL504_RS02865	PF04954	Siderophore-interacting protein
AL504_RS02865	PF00005	ABC transporter
AL504_RS02875	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS02875	PF00593	TonB dependent receptor
AL504_RS02880	PF17754	MftR C-terminal domain
AL504_RS02880	PF00440	Bacterial regulatory proteins, tetR family
AL504_RS02885	PF13649	Methyltransferase domain
AL504_RS02895	PF03466	LysR substrate binding domain
AL504_RS02895	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS02900	PF01042	Endoribonuclease L-PSP
AL504_RS02920	PF03466	LysR substrate binding domain
AL504_RS02920	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS02925	PF01470	Pyroglutamyl peptidase
AL504_RS02930	PF00561	alpha/beta hydrolase fold
AL504_RS02935	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS02940	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL504_RS02945	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL504_RS02950	PF02913	FAD linked oxidases, C-terminal domain
AL504_RS02950	PF01565	FAD binding domain 
AL504_RS02955	PF00155	Aminotransferase class I and II
AL504_RS02960	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS02970	PF00005	ABC transporter
AL504_RS02980	PF01053	Cys/Met metabolism PLP-dependent enzyme
AL504_RS02990	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS02990	PF03466	LysR substrate binding domain
AL504_RS03000	PF00581	Rhodanese-like domain
AL504_RS03025	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS03035	PF08281	Sigma-70, region 4
AL504_RS03035	PF04542	Sigma-70 region 2 
AL504_RS03055	PF00072	Response regulator receiver domain
AL504_RS03055	PF00196	Bacterial regulatory proteins, luxR family
AL504_RS03060	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS03060	PF00989	PAS fold
AL504_RS03060	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS03070	PF01047	MarR family
AL504_RS03075	PF00654	Voltage gated chloride channel
AL504_RS03080	PF03466	LysR substrate binding domain
AL504_RS03080	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS03085	PF01118	Semialdehyde dehydrogenase, NAD binding domain
AL504_RS03100	PF03466	LysR substrate binding domain
AL504_RS03100	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS03105	PF00501	AMP-binding enzyme
AL504_RS03105	PF13193	AMP-binding enzyme C-terminal domain
AL504_RS03110	PF00083	Sugar (and other) transporter
AL504_RS03115	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
AL504_RS03115	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
AL504_RS03125	PF00578	AhpC/TSA family
AL504_RS03130	PF03060	Nitronate monooxygenase
AL504_RS03135	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL504_RS03140	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS03145	PF00005	ABC transporter
AL504_RS03150	PF08281	Sigma-70, region 4
AL504_RS03150	PF04542	Sigma-70 region 2 
AL504_RS03155	PF04773	FecR protein
AL504_RS03155	PF16220	Domain of unknown function (DUF4880)
AL504_RS03160	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS03160	PF00593	TonB dependent receptor
AL504_RS03170	PF03621	MbtH-like protein
AL504_RS03175	PF00501	AMP-binding enzyme
AL504_RS03175	PF00975	Thioesterase domain
AL504_RS03175	PF13193	AMP-binding enzyme C-terminal domain
AL504_RS03175	PF00550	Phosphopantetheine attachment site
AL504_RS03175	PF00668	Condensation domain
AL504_RS03190	PF00501	AMP-binding enzyme
AL504_RS03190	PF13193	AMP-binding enzyme C-terminal domain
AL504_RS03190	PF07993	Male sterility protein
AL504_RS03190	PF00550	Phosphopantetheine attachment site
AL504_RS03190	PF00668	Condensation domain
AL504_RS03195	PF00550	Phosphopantetheine attachment site
AL504_RS03195	PF00501	AMP-binding enzyme
AL504_RS03195	PF00668	Condensation domain
AL504_RS03195	PF07993	Male sterility protein
AL504_RS03195	PF13193	AMP-binding enzyme C-terminal domain
AL504_RS03200	PF00501	AMP-binding enzyme
AL504_RS03200	PF00668	Condensation domain
AL504_RS03200	PF13193	AMP-binding enzyme C-terminal domain
AL504_RS03200	PF00550	Phosphopantetheine attachment site
AL504_RS03205	PF00550	Phosphopantetheine attachment site
AL504_RS03205	PF00501	AMP-binding enzyme
AL504_RS03205	PF00668	Condensation domain
AL504_RS03205	PF13193	AMP-binding enzyme C-terminal domain
AL504_RS03210	PF00550	Phosphopantetheine attachment site
AL504_RS03210	PF00501	AMP-binding enzyme
AL504_RS03210	PF00668	Condensation domain
AL504_RS03210	PF13193	AMP-binding enzyme C-terminal domain
AL504_RS03215	PF13193	AMP-binding enzyme C-terminal domain
AL504_RS03215	PF00668	Condensation domain
AL504_RS03215	PF00550	Phosphopantetheine attachment site
AL504_RS03215	PF00501	AMP-binding enzyme
AL504_RS03220	PF07859	alpha/beta hydrolase fold
AL504_RS03225	PF00593	TonB dependent receptor
AL504_RS03225	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS03230	PF00202	Aminotransferase class-III
AL504_RS03235	PF13434	L-lysine 6-monooxygenase (NADPH-requiring)
AL504_RS03250	PF00005	ABC transporter
AL504_RS03250	PF00664	ABC transporter transmembrane region
AL504_RS03255	PF00005	ABC transporter
AL504_RS03260	PF01032	FecCD transport family
AL504_RS03265	PF01032	FecCD transport family
AL504_RS03270	PF01497	Periplasmic binding protein
AL504_RS03275	PF07660	Secretin and TonB N terminus short domain
AL504_RS03275	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS03275	PF00593	TonB dependent receptor
AL504_RS03300	PF06276	Ferric iron reductase FhuF-like transporter
AL504_RS03300	PF04183	IucA / IucC family
AL504_RS03310	PF13434	L-lysine 6-monooxygenase (NADPH-requiring)
AL504_RS03315	PF00005	ABC transporter
AL504_RS03320	PF03649	Uncharacterised protein family (UPF0014)
AL504_RS03325	PF09335	SNARE associated Golgi protein
AL504_RS03330	PF03971	Monomeric isocitrate dehydrogenase
AL504_RS03335	PF00486	Transcriptional regulatory protein, C terminal
AL504_RS03335	PF00072	Response regulator receiver domain
AL504_RS03340	PF00291	Pyridoxal-phosphate dependent enzyme
AL504_RS03340	PF00585	C-terminal regulatory domain of Threonine dehydratase
AL504_RS03345	PF00005	ABC transporter
AL504_RS03350	PF00127	Copper binding proteins, plastocyanin/azurin family
AL504_RS03355	PF01032	FecCD transport family
AL504_RS03365	PF00486	Transcriptional regulatory protein, C terminal
AL504_RS03365	PF00072	Response regulator receiver domain
AL504_RS03370	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS03370	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS03375	PF00593	TonB dependent receptor
AL504_RS03375	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS03380	PF00005	ABC transporter
AL504_RS03385	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS03390	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS03395	PF00155	Aminotransferase class I and II
AL504_RS03400	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL504_RS03405	PF07702	UTRA domain
AL504_RS03405	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS03410	PF00701	Dihydrodipicolinate synthetase family
AL504_RS03415	PF00171	Aldehyde dehydrogenase family
AL504_RS03420	PF00701	Dihydrodipicolinate synthetase family
AL504_RS03425	PF04295	D-galactarate dehydratase / Altronate hydrolase, C terminus
AL504_RS03425	PF08666	SAF domain
AL504_RS03430	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS03455	PF00117	Glutamine amidotransferase class-I
AL504_RS03455	PF00958	GMP synthase C terminal domain
AL504_RS03460	PF00296	Luciferase-like monooxygenase
AL504_RS03465	PF00005	ABC transporter
AL504_RS03470	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS03490	PF00149	Calcineurin-like phosphoesterase
AL504_RS03495	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS03500	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS03510	PF00857	Isochorismatase family
AL504_RS03515	PF03466	LysR substrate binding domain
AL504_RS03515	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS03525	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL504_RS03530	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS03535	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS03535	PF12911	N-terminal TM domain of oligopeptide transport permease C
AL504_RS03540	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL504_RS03540	PF00005	ABC transporter
AL504_RS03545	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL504_RS03545	PF00005	ABC transporter
AL504_RS03550	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS03550	PF00593	TonB dependent receptor
AL504_RS03555	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS03555	PF03466	LysR substrate binding domain
AL504_RS03560	PF01053	Cys/Met metabolism PLP-dependent enzyme
AL504_RS03565	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL504_RS03570	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS03575	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS03580	PF00005	ABC transporter
AL504_RS03595	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS03595	PF00593	TonB dependent receptor
AL504_RS03600	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS03600	PF03466	LysR substrate binding domain
AL504_RS03605	PF04371	Porphyromonas-type peptidyl-arginine deiminase
AL504_RS03615	PF03466	LysR substrate binding domain
AL504_RS03615	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS03620	PF00248	Aldo/keto reductase family
AL504_RS03635	PF06719	AraC-type transcriptional regulator N-terminus
AL504_RS03635	PF12833	Helix-turn-helix domain
AL504_RS03640	PF00171	Aldehyde dehydrogenase family
AL504_RS03645	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS03650	PF00330	Aconitase family (aconitate hydratase)
AL504_RS03650	PF00694	Aconitase C-terminal domain
AL504_RS03660	PF06506	Propionate catabolism activator
AL504_RS03660	PF02954	Bacterial regulatory protein, Fis family
AL504_RS03660	PF00158	Sigma-54 interaction domain
AL504_RS03680	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS03680	PF03466	LysR substrate binding domain
AL504_RS03690	PF07664	Ferrous iron transport protein B C terminus
AL504_RS03690	PF02421	Ferrous iron transport protein B
AL504_RS03690	PF07670	Nucleoside recognition
AL504_RS03705	PF01638	HxlR-like helix-turn-helix
AL504_RS03715	PF12951	Passenger-associated-transport-repeat
AL504_RS03735	PF12706	Beta-lactamase superfamily domain
AL504_RS03745	PF06039	Malate:quinone oxidoreductase (Mqo)
AL504_RS03755	PF00083	Sugar (and other) transporter
AL504_RS03760	PF00850	Histone deacetylase domain
AL504_RS03765	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS03765	PF03466	LysR substrate binding domain
AL504_RS03770	PF00043	Glutathione S-transferase, C-terminal domain
AL504_RS03770	PF02798	Glutathione S-transferase, N-terminal domain
AL504_RS03795	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL504_RS03800	PF01053	Cys/Met metabolism PLP-dependent enzyme
AL504_RS03805	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS03805	PF00155	Aminotransferase class I and II
AL504_RS03810	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS03815	PF01557	Fumarylacetoacetate (FAA) hydrolase family
AL504_RS03825	PF14759	Reductase C-terminal
AL504_RS03825	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL504_RS03830	PF00355	Rieske [2Fe-2S] domain
AL504_RS03835	PF00848	Ring hydroxylating alpha subunit (catalytic domain)
AL504_RS03835	PF00355	Rieske [2Fe-2S] domain
AL504_RS03840	PF00866	Ring hydroxylating beta subunit
AL504_RS03850	PF02423	Ornithine cyclodeaminase/mu-crystallin family
AL504_RS03855	PF01557	Fumarylacetoacetate (FAA) hydrolase family
AL504_RS03870	PF01266	FAD dependent oxidoreductase
AL504_RS03875	PF01042	Endoribonuclease L-PSP
AL504_RS03880	PF07364	Metallopeptidase family M81
AL504_RS03880	PF07171	MlrC C-terminus
AL504_RS03885	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL504_RS03890	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS03895	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS03895	PF12911	N-terminal TM domain of oligopeptide transport permease C
AL504_RS03900	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL504_RS03900	PF00005	ABC transporter
AL504_RS03905	PF00005	ABC transporter
AL504_RS03905	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL504_RS03910	PF07969	Amidohydrolase family
AL504_RS03925	PF13847	Methyltransferase domain
AL504_RS03930	PF10005	zinc-ribbon domain
AL504_RS03930	PF15887	Putative zinc-binding metallo-peptidase
AL504_RS03935	PF02016	LD-carboxypeptidase N-terminal domain
AL504_RS03935	PF17676	LD-carboxypeptidase C-terminal domain
AL504_RS03940	PF01479	S4 domain
AL504_RS03940	PF00163	Ribosomal protein S4/S9 N-terminal domain
AL504_RS03945	PF01053	Cys/Met metabolism PLP-dependent enzyme
AL504_RS03950	PF01594	AI-2E family transporter
AL504_RS03960	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS03960	PF03466	LysR substrate binding domain
AL504_RS03965	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL504_RS03965	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AL504_RS03970	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS03980	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS03980	PF03466	LysR substrate binding domain
AL504_RS03990	PF00990	Diguanylate cyclase, GGDEF domain
AL504_RS04000	PF00376	MerR family regulatory protein
AL504_RS04000	PF09278	MerR, DNA binding
AL504_RS04005	PF07694	5TMR of 5TMR-LYT
AL504_RS04005	PF00990	Diguanylate cyclase, GGDEF domain
AL504_RS04025	PF11612	Type II secretion system (T2SS), protein J
AL504_RS04025	PF07963	Prokaryotic N-terminal methylation motif
AL504_RS04030	PF07963	Prokaryotic N-terminal methylation motif
AL504_RS04030	PF02501	Type II secretion system (T2SS), protein I
AL504_RS04075	PF12849	PBP superfamily domain
AL504_RS04080	PF12849	PBP superfamily domain
AL504_RS04085	PF00482	Type II secretion system (T2SS), protein F
AL504_RS04090	PF00437	Type II/IV secretion system protein
AL504_RS04120	PF01970	Tripartite tricarboxylate transporter TctA family
AL504_RS04130	PF07690	Major Facilitator Superfamily
AL504_RS04140	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS04140	PF03466	LysR substrate binding domain
AL504_RS04145	PF00248	Aldo/keto reductase family
AL504_RS04150	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS04150	PF03466	LysR substrate binding domain
AL504_RS04165	PF00672	HAMP domain
AL504_RS04165	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS04165	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS04170	PF12951	Passenger-associated-transport-repeat
AL504_RS04190	PF03471	Transporter associated domain
AL504_RS04190	PF03741	Integral membrane protein TerC family
AL504_RS04195	PF13618	Gluconate 2-dehydrogenase subunit 3
AL504_RS04200	PF05199	GMC oxidoreductase
AL504_RS04200	PF00732	GMC oxidoreductase
AL504_RS04205	PF00034	Cytochrome c
AL504_RS04215	PF02308	MgtC family
AL504_RS04225	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS04225	PF00593	TonB dependent receptor
AL504_RS04240	PF00563	EAL domain
AL504_RS04240	PF13188	PAS domain
AL504_RS04240	PF03707	Bacterial signalling protein N terminal repeat
AL504_RS04240	PF00990	Diguanylate cyclase, GGDEF domain
AL504_RS04245	PF12805	FUSC-like inner membrane protein yccS
AL504_RS04265	PF01965	DJ-1/PfpI family
AL504_RS04315	PF00072	Response regulator receiver domain
AL504_RS04315	PF00158	Sigma-54 interaction domain
AL504_RS04315	PF02954	Bacterial regulatory protein, Fis family
AL504_RS04320	PF02954	Bacterial regulatory protein, Fis family
AL504_RS04320	PF00158	Sigma-54 interaction domain
AL504_RS04325	PF00309	Sigma-54 factor, Activator interacting domain (AID) 
AL504_RS04325	PF04963	Sigma-54 factor, core binding domain
AL504_RS04325	PF04552	Sigma-54, DNA binding domain
AL504_RS04335	PF08448	PAS fold
AL504_RS04335	PF13188	PAS domain
AL504_RS04335	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS04335	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS04335	PF00072	Response regulator receiver domain
AL504_RS04345	PF00593	TonB dependent receptor
AL504_RS04345	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS04365	PF08021	Siderophore-interacting FAD-binding domain
AL504_RS04365	PF00664	ABC transporter transmembrane region
AL504_RS04365	PF04954	Siderophore-interacting protein
AL504_RS04365	PF00005	ABC transporter
AL504_RS04370	PF00005	ABC transporter
AL504_RS04370	PF00664	ABC transporter transmembrane region
AL504_RS04380	PF05247	Flagellar transcriptional activator (FlhD)
AL504_RS04385	PF07690	Major Facilitator Superfamily
AL504_RS04390	PF03466	LysR substrate binding domain
AL504_RS04390	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS04400	PF00563	EAL domain
AL504_RS04405	PF00793	DAHP synthetase I family
AL504_RS04410	PF01266	FAD dependent oxidoreductase
AL504_RS04425	PF00072	Response regulator receiver domain
AL504_RS04425	PF00486	Transcriptional regulatory protein, C terminal
AL504_RS04430	PF03328	HpcH/HpaI aldolase/citrate lyase family
AL504_RS04435	PF12848	ABC transporter
AL504_RS04435	PF00005	ABC transporter
AL504_RS04445	PF02666	Phosphatidylserine decarboxylase
AL504_RS04470	PF01070	FMN-dependent dehydrogenase
AL504_RS04475	PF00149	Calcineurin-like phosphoesterase
AL504_RS04485	PF07690	Major Facilitator Superfamily
AL504_RS04490	PF00990	Diguanylate cyclase, GGDEF domain
AL504_RS04490	PF00072	Response regulator receiver domain
AL504_RS04500	PF00491	Arginase family
AL504_RS04505	PF08240	Alcohol dehydrogenase GroES-like domain
AL504_RS04505	PF00107	Zinc-binding dehydrogenase
AL504_RS04510	PF04241	Protein of unknown function (DUF423)
AL504_RS04515	PF00892	EamA-like transporter family
AL504_RS04525	PF07995	Glucose / Sorbosone dehydrogenase
AL504_RS04530	PF02798	Glutathione S-transferase, N-terminal domain
AL504_RS04530	PF00043	Glutathione S-transferase, C-terminal domain
AL504_RS04535	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS04535	PF03466	LysR substrate binding domain
AL504_RS04540	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS04545	PF07969	Amidohydrolase family
AL504_RS04550	PF01177	Asp/Glu/Hydantoin racemase
AL504_RS04555	PF00005	ABC transporter
AL504_RS04560	PF00005	ABC transporter
AL504_RS04560	PF12399	Branched-chain amino acid ATP-binding cassette transporter
AL504_RS04565	PF11862	Domain of unknown function (DUF3382)
AL504_RS04565	PF02653	Branched-chain amino acid transport system / permease component
AL504_RS04570	PF02653	Branched-chain amino acid transport system / permease component
AL504_RS04575	PF13458	Periplasmic binding protein
AL504_RS04580	PF02592	Putative vitamin uptake transporter
AL504_RS04585	PF03807	NADP oxidoreductase coenzyme F420-dependent
AL504_RS04585	PF14748	Pyrroline-5-carboxylate reductase dimerisation
AL504_RS04590	PF13416	Bacterial extracellular solute-binding protein
AL504_RS04595	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS04600	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS04605	PF00005	ABC transporter
AL504_RS04605	PF17912	MalK OB fold domain
AL504_RS04620	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS04620	PF00672	HAMP domain
AL504_RS04620	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS04625	PF00486	Transcriptional regulatory protein, C terminal
AL504_RS04625	PF00072	Response regulator receiver domain
AL504_RS04630	PF13458	Periplasmic binding protein
AL504_RS04640	PF00544	Pectate lyase
AL504_RS04670	PF00534	Glycosyl transferases group 1
AL504_RS04680	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
AL504_RS04680	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
AL504_RS04680	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
AL504_RS04685	PF00210	Ferritin-like domain
AL504_RS04690	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS04690	PF03466	LysR substrate binding domain
AL504_RS04695	PF17191	RecG wedge domain
AL504_RS04695	PF00270	DEAD/DEAH box helicase
AL504_RS04695	PF00271	Helicase conserved C-terminal domain
AL504_RS04700	PF01042	Endoribonuclease L-PSP
AL504_RS04715	PF03466	LysR substrate binding domain
AL504_RS04715	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS04730	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS04735	PF00175	Oxidoreductase NAD-binding domain 
AL504_RS04735	PF00970	Oxidoreductase FAD-binding domain
AL504_RS04740	PF13416	Bacterial extracellular solute-binding protein
AL504_RS04745	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS04750	PF08402	TOBE domain
AL504_RS04750	PF00005	ABC transporter
AL504_RS04755	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS04765	PF00472	RF-1 domain
AL504_RS04770	PF05726	Pirin C-terminal cupin domain
AL504_RS04770	PF02678	Pirin
AL504_RS04775	PF02678	Pirin
AL504_RS04775	PF17954	Quercetinase C-terminal cupin domain
AL504_RS04780	PF03466	LysR substrate binding domain
AL504_RS04780	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS04790	PF00989	PAS fold
AL504_RS04790	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS04790	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS04795	PF03951	Glutamine synthetase, beta-Grasp domain
AL504_RS04795	PF00120	Glutamine synthetase, catalytic domain
AL504_RS04800	PF06969	HemN C-terminal domain
AL504_RS04800	PF04055	Radical SAM superfamily
AL504_RS04805	PF01725	Ham1 family
AL504_RS04810	PF00990	Diguanylate cyclase, GGDEF domain
AL504_RS04810	PF00563	EAL domain
AL504_RS04810	PF03707	Bacterial signalling protein N terminal repeat
AL504_RS04815	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL504_RS04815	PF02770	Acyl-CoA dehydrogenase, middle domain
AL504_RS04815	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL504_RS04825	PF01138	3' exoribonuclease family, domain 1
AL504_RS04825	PF03725	3' exoribonuclease family, domain 2
AL504_RS04830	PF03755	YicC-like family, N-terminal region 
AL504_RS04830	PF08340	Domain of unknown function (DUF1732)
AL504_RS04835	PF00324	Amino acid permease
AL504_RS04840	PF10423	Bacterial AMP nucleoside phosphorylase N-terminus 
AL504_RS04840	PF01048	Phosphorylase superfamily
AL504_RS04855	PF00877	NlpC/P60 family
AL504_RS04865	PF00034	Cytochrome c
AL504_RS04870	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
AL504_RS04875	PF00625	Guanylate kinase
AL504_RS04880	PF01192	RNA polymerase Rpb6 
AL504_RS04885	PF02824	TGS domain
AL504_RS04885	PF04607	Region found in RelA / SpoT proteins
AL504_RS04885	PF13291	ACT domain
AL504_RS04890	PF12833	Helix-turn-helix domain
AL504_RS04890	PF01965	DJ-1/PfpI family
AL504_RS04895	PF00857	Isochorismatase family
AL504_RS04900	PF00005	ABC transporter
AL504_RS04905	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS04910	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL504_RS04920	PF01968	Hydantoinase/oxoprolinase
AL504_RS04920	PF05378	Hydantoinase/oxoprolinase N-terminal region
AL504_RS04930	PF09296	NADH pyrophosphatase-like rudimentary NUDIX domain
AL504_RS04930	PF00293	NUDIX domain
AL504_RS04930	PF09297	NADH pyrophosphatase zinc ribbon domain
AL504_RS04945	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
AL504_RS04950	PF13609	Gram-negative porin
AL504_RS04955	PF00005	ABC transporter
AL504_RS04960	PF12399	Branched-chain amino acid ATP-binding cassette transporter
AL504_RS04960	PF00005	ABC transporter
AL504_RS04970	PF02653	Branched-chain amino acid transport system / permease component
AL504_RS04980	PF07286	Protein of unknown function (DUF1445)
AL504_RS04985	PF03466	LysR substrate binding domain
AL504_RS04985	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS04990	PF01425	Amidase
AL504_RS05000	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
AL504_RS05015	PF03466	LysR substrate binding domain
AL504_RS05015	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS05025	PF12241	Trans-2-enoyl-CoA reductase catalytic region
AL504_RS05025	PF07055	Enoyl reductase FAD binding domain
AL504_RS05025	PF12242	NAD(P)H binding domain of trans-2-enoyl-CoA reductase
AL504_RS05035	PF03466	LysR substrate binding domain
AL504_RS05035	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS05040	PF00005	ABC transporter
AL504_RS05040	PF08402	TOBE domain
AL504_RS05045	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS05055	PF00005	ABC transporter
AL504_RS05060	PF13472	GDSL-like Lipase/Acylhydrolase family
AL504_RS05065	PF13145	PPIC-type PPIASE domain
AL504_RS05070	PF01546	Peptidase family M20/M25/M40
AL504_RS05070	PF07687	Peptidase dimerisation domain
AL504_RS05075	PF03009	Glycerophosphoryl diester phosphodiesterase family
AL504_RS05080	PF04378	Ribosomal RNA large subunit methyltransferase D, RlmJ
AL504_RS05085	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS05090	PF00221	Aromatic amino acid lyase
AL504_RS05095	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL504_RS05095	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AL504_RS05100	PF00462	Glutaredoxin
AL504_RS05100	PF08534	Redoxin
AL504_RS05110	PF00403	Heavy-metal-associated domain
AL504_RS05115	PF00376	MerR family regulatory protein
AL504_RS05115	PF09278	MerR, DNA binding
AL504_RS05120	PF05958	tRNA (Uracil-5-)-methyltransferase
AL504_RS05140	PF01476	LysM domain
AL504_RS05140	PF01551	Peptidase family M23
AL504_RS05150	PF01975	Survival protein SurE
AL504_RS05155	PF02660	Glycerol-3-phosphate acyltransferase
AL504_RS05160	PF00814	Glycoprotease family
AL504_RS05165	PF00860	Permease family
AL504_RS05175	PF00296	Luciferase-like monooxygenase
AL504_RS05180	PF00085	Thioredoxin
AL504_RS05185	PF01205	Uncharacterized protein family UPF0029
AL504_RS05205	PF00005	ABC transporter
AL504_RS05210	PF07690	Major Facilitator Superfamily
AL504_RS05215	PF12848	ABC transporter
AL504_RS05215	PF00005	ABC transporter
AL504_RS05220	PF02016	LD-carboxypeptidase N-terminal domain
AL504_RS05220	PF17676	LD-carboxypeptidase C-terminal domain
AL504_RS05225	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
AL504_RS05240	PF03334	Na+/H+ antiporter subunit
AL504_RS05245	PF04066	Multiple resistance and pH regulation protein F (MrpF / PhaF)
AL504_RS05250	PF01899	Na+/H+ ion antiporter subunit
AL504_RS05255	PF00361	Proton-conducting membrane transporter
AL504_RS05260	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
AL504_RS05275	PF00593	TonB dependent receptor
AL504_RS05275	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS05280	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS05280	PF00593	TonB dependent receptor
AL504_RS05305	PF00149	Calcineurin-like phosphoesterase
AL504_RS05305	PF12320	Type 5 capsule protein repressor C-terminal domain
AL504_RS05310	PF01266	FAD dependent oxidoreductase
AL504_RS05315	PF01037	Lrp/AsnC ligand binding domain
AL504_RS05350	PF02770	Acyl-CoA dehydrogenase, middle domain
AL504_RS05350	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL504_RS05350	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL504_RS05355	PF02082	Transcriptional regulator
AL504_RS05360	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL504_RS05360	PF13192	Thioredoxin domain
AL504_RS05385	PF13609	Gram-negative porin
AL504_RS05390	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL504_RS05410	PF00072	Response regulator receiver domain
AL504_RS05410	PF00486	Transcriptional regulatory protein, C terminal
AL504_RS05430	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS05435	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS05440	PF00005	ABC transporter
AL504_RS05440	PF08402	TOBE domain
AL504_RS05450	PF00455	DeoR C terminal sensor domain
AL504_RS05450	PF08220	DeoR-like helix-turn-helix domain
AL504_RS05455	PF16901	C-terminal domain of alpha-glycerophosphate oxidase
AL504_RS05455	PF01266	FAD dependent oxidoreductase
AL504_RS05460	PF00072	Response regulator receiver domain
AL504_RS05470	PF00107	Zinc-binding dehydrogenase
AL504_RS05470	PF16884	N-terminal domain of oxidoreductase
AL504_RS05485	PF00005	ABC transporter
AL504_RS05495	PF02321	Outer membrane efflux protein
AL504_RS05505	PF04073	Aminoacyl-tRNA editing domain
AL504_RS05535	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
AL504_RS05545	PF00472	RF-1 domain
AL504_RS05555	PF01242	6-pyruvoyl tetrahydropterin synthase
AL504_RS05565	PF04632	Fusaric acid resistance protein family
AL504_RS05570	PF07869	Protein of unknown function (DUF1656)
AL504_RS05575	PF00529	HlyD membrane-fusion protein of T1SS
AL504_RS05575	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
AL504_RS05590	PF00205	Thiamine pyrophosphate enzyme, central domain
AL504_RS05590	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AL504_RS05590	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AL504_RS05610	PF02230	Phospholipase/Carboxylesterase
AL504_RS05615	PF00324	Amino acid permease
AL504_RS05645	PF03466	LysR substrate binding domain
AL504_RS05645	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS05650	PF00248	Aldo/keto reductase family
AL504_RS05660	PF14572	Phosphoribosyl synthetase-associated domain
AL504_RS05660	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
AL504_RS05665	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
AL504_RS05690	PF03466	LysR substrate binding domain
AL504_RS05690	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS05700	PF00005	ABC transporter
AL504_RS05705	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS05710	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS05715	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL504_RS05720	PF00155	Aminotransferase class I and II
AL504_RS05780	PF02203	Tar ligand binding domain homologue
AL504_RS05780	PF00672	HAMP domain
AL504_RS05780	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL504_RS05815	PF02627	Carboxymuconolactone decarboxylase family
AL504_RS05825	PF07364	Metallopeptidase family M81
AL504_RS05825	PF07171	MlrC C-terminus
AL504_RS05840	PF00005	ABC transporter
AL504_RS05860	PF00795	Carbon-nitrogen hydrolase
AL504_RS05865	PF06983	3-demethylubiquinone-9 3-methyltransferase
AL504_RS05870	PF07690	Major Facilitator Superfamily
AL504_RS05875	PF06772	Bacterial low temperature requirement A protein (LtrA)
AL504_RS05885	PF00593	TonB dependent receptor
AL504_RS05885	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS05890	PF00891	O-methyltransferase domain
AL504_RS05890	PF16864	Dimerisation domain
AL504_RS05900	PF09339	IclR helix-turn-helix domain
AL504_RS05900	PF01614	Bacterial transcriptional regulator
AL504_RS05905	PF00732	GMC oxidoreductase
AL504_RS05905	PF05199	GMC oxidoreductase
AL504_RS05910	PF00083	Sugar (and other) transporter
AL504_RS05910	PF07690	Major Facilitator Superfamily
AL504_RS05915	PF02321	Outer membrane efflux protein
AL504_RS05920	PF00873	AcrB/AcrD/AcrF family
AL504_RS05925	PF00529	HlyD membrane-fusion protein of T1SS
AL504_RS05925	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
AL504_RS05935	PF00248	Aldo/keto reductase family
AL504_RS05945	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS05950	PF00440	Bacterial regulatory proteins, tetR family
AL504_RS05965	PF04463	Protein of unknown function (DUF523)
AL504_RS05980	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
AL504_RS05980	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AL504_RS05985	PF00378	Enoyl-CoA hydratase/isomerase
AL504_RS05985	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
AL504_RS05985	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
AL504_RS05990	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL504_RS05990	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL504_RS05990	PF02770	Acyl-CoA dehydrogenase, middle domain
AL504_RS05995	PF03658	RnfH family Ubiquitin
AL504_RS06000	PF03364	Polyketide cyclase / dehydrase and lipid transport
AL504_RS06005	PF01668	SmpB protein
AL504_RS06010	PF00990	Diguanylate cyclase, GGDEF domain
AL504_RS06015	PF01145	SPFH domain / Band 7 family
AL504_RS06025	PF02540	NAD synthase
AL504_RS06025	PF00117	Glutamine amidotransferase class-I
AL504_RS06025	PF00958	GMP synthase C terminal domain
AL504_RS06030	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
AL504_RS06030	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
AL504_RS06030	PF02805	Metal binding domain of Ada
AL504_RS06030	PF12833	Helix-turn-helix domain
AL504_RS06035	PF00391	PEP-utilising enzyme, mobile domain
AL504_RS06035	PF02896	PEP-utilising enzyme, TIM barrel domain
AL504_RS06035	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
AL504_RS06040	PF03618	Kinase/pyrophosphorylase
AL504_RS06070	PF08032	RNA 2'-O ribose methyltransferase substrate binding
AL504_RS06070	PF00588	SpoU rRNA Methylase family
AL504_RS06075	PF01351	Ribonuclease HII
AL504_RS06080	PF02684	Lipid-A-disaccharide synthetase
AL504_RS06085	PF00132	Bacterial transferase hexapeptide (six repeats)
AL504_RS06085	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2
AL504_RS06090	PF07977	FabA-like domain
AL504_RS06095	PF14602	Hexapeptide repeat of succinyl-transferase
AL504_RS06095	PF00132	Bacterial transferase hexapeptide (six repeats)
AL504_RS06095	PF04613	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD  
AL504_RS06100	PF03938	Outer membrane protein (OmpH-like)
AL504_RS06105	PF01103	Surface antigen
AL504_RS06105	PF07244	Surface antigen variable number repeat
AL504_RS06110	PF02163	Peptidase family M50
AL504_RS06110	PF17820	PDZ domain
AL504_RS06115	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
AL504_RS06115	PF13288	DXP reductoisomerase C-terminal domain
AL504_RS06115	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
AL504_RS06125	PF01255	Putative undecaprenyl diphosphate synthase
AL504_RS06130	PF01765	Ribosome recycling factor
AL504_RS06135	PF00696	Amino acid kinase family
AL504_RS06140	PF00889	Elongation factor TS
AL504_RS06145	PF00318	Ribosomal protein S2
AL504_RS06150	PF00557	Metallopeptidase family M24
AL504_RS06155	PF01909	Nucleotidyltransferase domain
AL504_RS06155	PF01966	HD domain
AL504_RS06155	PF08335	GlnD PII-uridylyltransferase
AL504_RS06165	PF02600	Disulfide bond formation protein DsbB
AL504_RS06170	PF01863	Protein of unknown function DUF45
AL504_RS06175	PF00156	Phosphoribosyl transferase domain
AL504_RS06190	PF08245	Mur ligase middle domain
AL504_RS06190	PF02875	Mur ligase family, glutamate ligase domain
AL504_RS06200	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS06205	PF02515	CoA-transferase family III
AL504_RS06210	PF02770	Acyl-CoA dehydrogenase, middle domain
AL504_RS06210	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL504_RS06210	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL504_RS06225	PF02465	Flagellar hook-associated protein 2 N-terminus
AL504_RS06225	PF07195	Flagellar hook-associated protein 2 C-terminus
AL504_RS06230	PF02561	Flagellar protein FliS
AL504_RS06245	PF01312	FlhB HrpN YscU SpaS Family
AL504_RS06255	PF02049	Flagellar hook-basal body complex protein FliE
AL504_RS06260	PF08345	Flagellar M-ring protein C-terminal
AL504_RS06260	PF01514	Secretory protein of YscJ/FliF family
AL504_RS06265	PF14842	FliG N-terminal domain
AL504_RS06265	PF14841	FliG middle domain
AL504_RS06265	PF01706	FliG C-terminal domain
AL504_RS06275	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AL504_RS06275	PF18269	T3SS EscN ATPase C-terminal domain
AL504_RS06290	PF03748	Flagellar basal body-associated protein FliL
AL504_RS06295	PF02154	Flagellar motor switch protein FliM
AL504_RS06295	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
AL504_RS06305	PF04347	Flagellar biosynthesis protein, FliO
AL504_RS06310	PF00813	FliP family
AL504_RS06315	PF01313	Bacterial export proteins, family 3
AL504_RS06325	PF08447	PAS fold
AL504_RS06325	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL504_RS06330	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL504_RS06330	PF00672	HAMP domain
AL504_RS06330	PF02203	Tar ligand binding domain homologue
AL504_RS06340	PF00672	HAMP domain
AL504_RS06340	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL504_RS06340	PF02203	Tar ligand binding domain homologue
AL504_RS06345	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL504_RS06345	PF02203	Tar ligand binding domain homologue
AL504_RS06345	PF00672	HAMP domain
AL504_RS06350	PF00669	Bacterial flagellin N-terminal helical region
AL504_RS06355	PF00460	Flagella basal body rod protein
AL504_RS06355	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL504_RS06360	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
AL504_RS06360	PF10135	Rod binding protein
AL504_RS06365	PF02119	Flagellar P-ring protein
AL504_RS06370	PF02107	Flagellar L-ring protein
AL504_RS06375	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL504_RS06375	PF00460	Flagella basal body rod protein
AL504_RS06385	PF07559	Flagellar basal body protein FlaE
AL504_RS06385	PF00460	Flagella basal body rod protein
AL504_RS06385	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL504_RS06390	PF13860	FlgD Ig-like domain
AL504_RS06390	PF03963	Flagellar hook capping protein - N-terminal region
AL504_RS06390	PF13861	FlgD Tudor-like domain
AL504_RS06395	PF00460	Flagella basal body rod protein
AL504_RS06395	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL504_RS06400	PF00460	Flagella basal body rod protein
AL504_RS06410	PF04316	Anti-sigma-28 factor, FlgM
AL504_RS06420	PF00448	SRP54-type protein, GTPase domain
AL504_RS06420	PF00448	SRP54-type protein, GTPase domain
AL504_RS06425	PF00771	FHIPEP family
AL504_RS06430	PF01312	FlhB HrpN YscU SpaS Family
AL504_RS06435	PF00672	HAMP domain
AL504_RS06435	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL504_RS06440	PF04344	Chemotaxis phosphatase, CheZ
AL504_RS06445	PF00072	Response regulator receiver domain
AL504_RS06450	PF01339	CheB methylesterase
AL504_RS06450	PF00072	Response regulator receiver domain
AL504_RS06455	PF01739	CheR methyltransferase, SAM binding domain
AL504_RS06455	PF03705	CheR methyltransferase, all-alpha domain
AL504_RS06460	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL504_RS06460	PF02203	Tar ligand binding domain homologue
AL504_RS06460	PF00672	HAMP domain
AL504_RS06465	PF01584	CheW-like domain
AL504_RS06475	PF00072	Response regulator receiver domain
AL504_RS06480	PF13677	Membrane MotB of proton-channel complex MotA/MotB 
AL504_RS06480	PF00691	OmpA family
AL504_RS06485	PF01618	MotA/TolQ/ExbB proton channel family
AL504_RS06490	PF05280	Flagellar transcriptional activator (FlhC)
AL504_RS06495	PF05247	Flagellar transcriptional activator (FlhD)
AL504_RS06500	PF04539	Sigma-70 region 3
AL504_RS06500	PF04542	Sigma-70 region 2 
AL504_RS06500	PF04545	Sigma-70, region 4
AL504_RS06505	PF10119	Predicted methyltransferase regulatory domain
AL504_RS06505	PF13847	Methyltransferase domain
AL504_RS06510	PF00669	Bacterial flagellin N-terminal helical region
AL504_RS06510	PF00700	Bacterial flagellin C-terminal helical region
AL504_RS06510	PF08884	Flagellin D3 domain
AL504_RS06525	PF16363	GDP-mannose 4,6 dehydratase
AL504_RS06535	PF08484	C-methyltransferase C-terminal domain
AL504_RS06535	PF08421	Putative zinc binding domain
AL504_RS06540	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
AL504_RS06565	PF04989	Cephalosporin hydroxylase
AL504_RS06580	PF03466	LysR substrate binding domain
AL504_RS06580	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS06590	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AL504_RS06590	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL504_RS06595	PF00364	Biotin-requiring enzyme
AL504_RS06595	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
AL504_RS06595	PF02817	e3 binding domain
AL504_RS06600	PF17831	Pyruvate dehydrogenase E1 component middle domain
AL504_RS06600	PF00456	Transketolase, thiamine diphosphate binding domain
AL504_RS06605	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS06605	PF00989	PAS fold
AL504_RS06605	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS06610	PF00196	Bacterial regulatory proteins, luxR family
AL504_RS06610	PF00072	Response regulator receiver domain
AL504_RS06615	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
AL504_RS06615	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
AL504_RS06620	PF01432	Peptidase family M3
AL504_RS06630	PF02630	SCO1/SenC
AL504_RS06635	PF04226	Transglycosylase associated protein
AL504_RS06640	PF02321	Outer membrane efflux protein
AL504_RS06645	PF00873	AcrB/AcrD/AcrF family
AL504_RS06650	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
AL504_RS06650	PF00529	HlyD membrane-fusion protein of T1SS
AL504_RS06655	PF03466	LysR substrate binding domain
AL504_RS06655	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS06660	PF01479	S4 domain
AL504_RS06660	PF00849	RNA pseudouridylate synthase
AL504_RS06665	PF04345	Chorismate lyase
AL504_RS06685	PF00107	Zinc-binding dehydrogenase
AL504_RS06685	PF16884	N-terminal domain of oxidoreductase
AL504_RS06690	PF16925	Tetracyclin repressor-like, C-terminal domain
AL504_RS06690	PF00440	Bacterial regulatory proteins, tetR family
AL504_RS06695	PF07152	YaeQ protein
AL504_RS06700	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL504_RS06700	PF00005	ABC transporter
AL504_RS06705	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS06705	PF12911	N-terminal TM domain of oligopeptide transport permease C
AL504_RS06710	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS06715	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL504_RS06725	PF03466	LysR substrate binding domain
AL504_RS06725	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS06730	PF05506	Domain of unknown function (DUF756)
AL504_RS06730	PF04185	Phosphoesterase family
AL504_RS06750	PF07963	Prokaryotic N-terminal methylation motif
AL504_RS06750	PF08334	Type II secretion system (T2SS), protein G
AL504_RS06755	PF12019	Type II transport protein GspH
AL504_RS06755	PF07963	Prokaryotic N-terminal methylation motif
AL504_RS06760	PF02501	Type II secretion system (T2SS), protein I
AL504_RS06760	PF07963	Prokaryotic N-terminal methylation motif
AL504_RS06765	PF11612	Type II secretion system (T2SS), protein J
AL504_RS06765	PF07963	Prokaryotic N-terminal methylation motif
AL504_RS06770	PF03934	Type II secretion system (T2SS), protein K
AL504_RS06785	PF01203	Type II secretion system (T2SS), protein N
AL504_RS06800	PF00437	Type II/IV secretion system protein
AL504_RS06805	PF00263	Bacterial type II and III secretion system protein
AL504_RS06805	PF03958	Bacterial type II/III secretion system short domain
AL504_RS06810	PF00482	Type II secretion system (T2SS), protein F
AL504_RS06815	PF00543	Nitrogen regulatory protein P-II
AL504_RS06820	PF00795	Carbon-nitrogen hydrolase
AL504_RS06820	PF02540	NAD synthase
AL504_RS06825	PF00924	Mechanosensitive ion channel
AL504_RS06830	PF00206	Lyase
AL504_RS06830	PF14698	Argininosuccinate lyase C-terminal
AL504_RS06840	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL504_RS06840	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AL504_RS06845	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
AL504_RS06845	PF00364	Biotin-requiring enzyme
AL504_RS06845	PF02817	e3 binding domain
AL504_RS06850	PF02780	Transketolase, C-terminal domain
AL504_RS06850	PF02779	Transketolase, pyrimidine binding domain
AL504_RS06855	PF00676	Dehydrogenase E1 component
AL504_RS06855	PF12573	2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal
AL504_RS06860	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS06860	PF00593	TonB dependent receptor
AL504_RS06885	PF13411	MerR HTH family regulatory protein
AL504_RS06890	PF00403	Heavy-metal-associated domain
AL504_RS06895	PF13302	Acetyltransferase (GNAT) domain
AL504_RS06900	PF03466	LysR substrate binding domain
AL504_RS06900	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS06905	PF07690	Major Facilitator Superfamily
AL504_RS06915	PF00677	Lumazine binding domain
AL504_RS06920	PF00171	Aldehyde dehydrogenase family
AL504_RS06925	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS06925	PF07729	FCD domain
AL504_RS06930	PF03062	MBOAT, membrane-bound O-acyltransferase family
AL504_RS06975	PF03060	Nitronate monooxygenase
AL504_RS06995	PF01925	Sulfite exporter TauE/SafE
AL504_RS07015	PF01914	MarC family integral membrane protein
AL504_RS07025	PF01425	Amidase
AL504_RS07030	PF07690	Major Facilitator Superfamily
AL504_RS07035	PF00356	Bacterial regulatory proteins, lacI family
AL504_RS07040	PF08241	Methyltransferase domain
AL504_RS07050	PF00005	ABC transporter
AL504_RS07050	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL504_RS07055	PF00005	ABC transporter
AL504_RS07055	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL504_RS07060	PF12911	N-terminal TM domain of oligopeptide transport permease C
AL504_RS07060	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS07065	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS07070	PF01266	FAD dependent oxidoreductase
AL504_RS07075	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL504_RS07075	PF04324	BFD-like [2Fe-2S] binding domain
AL504_RS07085	PF01266	FAD dependent oxidoreductase
AL504_RS07090	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS07090	PF03466	LysR substrate binding domain
AL504_RS07095	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL504_RS07100	PF08361	MAATS-type transcriptional repressor, C-terminal region
AL504_RS07100	PF00440	Bacterial regulatory proteins, tetR family
AL504_RS07105	PF07690	Major Facilitator Superfamily
AL504_RS07120	PF03466	LysR substrate binding domain
AL504_RS07120	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS07130	PF03466	LysR substrate binding domain
AL504_RS07130	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS07135	PF01266	FAD dependent oxidoreductase
AL504_RS07135	PF01571	Aminomethyltransferase folate-binding domain
AL504_RS07135	PF08669	Glycine cleavage T-protein C-terminal barrel domain
AL504_RS07135	PF16350	FAD dependent oxidoreductase central domain
AL504_RS07145	PF01638	HxlR-like helix-turn-helix
AL504_RS07155	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS07155	PF03466	LysR substrate binding domain
AL504_RS07160	PF00664	ABC transporter transmembrane region
AL504_RS07160	PF00005	ABC transporter
AL504_RS07165	PF01804	Penicillin amidase
AL504_RS07170	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS07170	PF03466	LysR substrate binding domain
AL504_RS07190	PF13193	AMP-binding enzyme C-terminal domain
AL504_RS07190	PF00501	AMP-binding enzyme
AL504_RS07205	PF03480	Bacterial extracellular solute-binding protein, family 7
AL504_RS07210	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
AL504_RS07220	PF01810	LysE type translocator
AL504_RS07225	PF01037	Lrp/AsnC ligand binding domain
AL504_RS07230	PF01965	DJ-1/PfpI family
AL504_RS07235	PF01965	DJ-1/PfpI family
AL504_RS07250	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS07260	PF13193	AMP-binding enzyme C-terminal domain
AL504_RS07260	PF00501	AMP-binding enzyme
AL504_RS07265	PF07702	UTRA domain
AL504_RS07265	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS07275	PF01323	DSBA-like thioredoxin domain
AL504_RS07280	PF00083	Sugar (and other) transporter
AL504_RS07280	PF07690	Major Facilitator Superfamily
AL504_RS07285	PF00596	Class II Aldolase and Adducin N-terminal domain
AL504_RS07290	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS07290	PF03466	LysR substrate binding domain
AL504_RS07295	PF00293	NUDIX domain
AL504_RS07295	PF09297	NADH pyrophosphatase zinc ribbon domain
AL504_RS07300	PF04655	Aminoglycoside/hydroxyurea antibiotic resistance kinase
AL504_RS07310	PF00593	TonB dependent receptor
AL504_RS07310	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS07320	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS07320	PF03466	LysR substrate binding domain
AL504_RS07335	PF05708	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
AL504_RS07345	PF00378	Enoyl-CoA hydratase/isomerase
AL504_RS07350	PF02515	CoA-transferase family III
AL504_RS07355	PF03466	LysR substrate binding domain
AL504_RS07355	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS07360	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS07375	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS07375	PF00593	TonB dependent receptor
AL504_RS07380	PF00378	Enoyl-CoA hydratase/isomerase
AL504_RS07385	PF13426	PAS domain
AL504_RS07385	PF00563	EAL domain
AL504_RS07385	PF00990	Diguanylate cyclase, GGDEF domain
AL504_RS07390	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS07395	PF00920	Dehydratase family
AL504_RS07405	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS07405	PF03466	LysR substrate binding domain
AL504_RS07410	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
AL504_RS07410	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
AL504_RS07415	PF05853	beta-keto acid cleavage enzyme
AL504_RS07430	PF01568	Molydopterin dinucleotide binding domain
AL504_RS07430	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AL504_RS07430	PF00384	Molybdopterin oxidoreductase
AL504_RS07435	PF03892	Nitrate reductase cytochrome c-type subunit (NapB)
AL504_RS07440	PF03264	NapC/NirT cytochrome c family, N-terminal region
AL504_RS07445	PF00005	ABC transporter
AL504_RS07450	PF03379	CcmB protein
AL504_RS07455	PF01578	Cytochrome C assembly protein
AL504_RS07460	PF03100	CcmE
AL504_RS07465	PF01578	Cytochrome C assembly protein
AL504_RS07465	PF16327	Cytochrome c-type biogenesis protein CcmF C-terminal
AL504_RS07470	PF03918	Cytochrome C biogenesis protein
AL504_RS07480	PF00384	Molybdopterin oxidoreductase
AL504_RS07480	PF01568	Molydopterin dinucleotide binding domain
AL504_RS07480	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AL504_RS07490	PF13247	4Fe-4S dicluster domain
AL504_RS07495	PF02613	Nitrate reductase delta subunit
AL504_RS07500	PF01568	Molydopterin dinucleotide binding domain
AL504_RS07500	PF18364	Molybdopterin oxidoreductase N-terminal domain
AL504_RS07500	PF00384	Molybdopterin oxidoreductase
AL504_RS07505	PF03264	NapC/NirT cytochrome c family, N-terminal region
AL504_RS07510	PF00005	ABC transporter
AL504_RS07515	PF03379	CcmB protein
AL504_RS07520	PF01578	Cytochrome C assembly protein
AL504_RS07530	PF03100	CcmE
AL504_RS07540	PF08534	Redoxin
AL504_RS07545	PF03918	Cytochrome C biogenesis protein
AL504_RS07560	PF02678	Pirin
AL504_RS07560	PF05726	Pirin C-terminal cupin domain
AL504_RS07565	PF01040	UbiA prenyltransferase family
AL504_RS07570	PF03466	LysR substrate binding domain
AL504_RS07570	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS07575	PF02321	Outer membrane efflux protein
AL504_RS07580	PF00873	AcrB/AcrD/AcrF family
AL504_RS07585	PF00529	HlyD membrane-fusion protein of T1SS
AL504_RS07585	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
AL504_RS07590	PF01965	DJ-1/PfpI family
AL504_RS07610	PF00145	C-5 cytosine-specific DNA methylase
AL504_RS07610	PF01381	Helix-turn-helix
AL504_RS07615	PF12833	Helix-turn-helix domain
AL504_RS07635	PF03275	UDP-galactopyranose mutase
AL504_RS07640	PF01613	Flavin reductase like domain
AL504_RS07645	PF17885	Styrene monooxygenase A putative substrate binding domain
AL504_RS07665	PF00821	Phosphoenolpyruvate carboxykinase C-terminal P-loop domain
AL504_RS07665	PF17297	Phosphoenolpyruvate carboxykinase N-terminal domain
AL504_RS07670	PF13193	AMP-binding enzyme C-terminal domain
AL504_RS07670	PF00501	AMP-binding enzyme
AL504_RS07685	PF00378	Enoyl-CoA hydratase/isomerase
AL504_RS07690	PF01554	MatE
AL504_RS07695	PF07687	Peptidase dimerisation domain
AL504_RS07695	PF01546	Peptidase family M20/M25/M40
AL504_RS07705	PF00892	EamA-like transporter family
AL504_RS07710	PF00892	EamA-like transporter family
AL504_RS07725	PF01810	LysE type translocator
AL504_RS07735	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AL504_RS07735	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL504_RS07740	PF01810	LysE type translocator
AL504_RS07750	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
AL504_RS07755	PF07732	Multicopper oxidase
AL504_RS07755	PF00394	Multicopper oxidase
AL504_RS07760	PF13545	Crp-like helix-turn-helix domain
AL504_RS07770	PF03781	Sulfatase-modifying factor enzyme 1
AL504_RS07775	PF00115	Cytochrome C and Quinol oxidase polypeptide I
AL504_RS07785	PF01177	Asp/Glu/Hydantoin racemase
AL504_RS07795	PF00501	AMP-binding enzyme
AL504_RS07795	PF13193	AMP-binding enzyme C-terminal domain
AL504_RS07800	PF12806	Acetyl-CoA dehydrogenase C-terminal like
AL504_RS07800	PF02770	Acyl-CoA dehydrogenase, middle domain
AL504_RS07800	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL504_RS07800	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL504_RS07810	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS07815	PF00005	ABC transporter
AL504_RS07825	PF07690	Major Facilitator Superfamily
AL504_RS07830	PF01638	HxlR-like helix-turn-helix
AL504_RS07845	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS07845	PF03466	LysR substrate binding domain
AL504_RS07850	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS07850	PF03466	LysR substrate binding domain
AL504_RS07860	PF03466	LysR substrate binding domain
AL504_RS07860	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS07880	PF01619	Proline dehydrogenase
AL504_RS07885	PF00892	EamA-like transporter family
AL504_RS07890	PF01266	FAD dependent oxidoreductase
AL504_RS07895	PF02082	Transcriptional regulator
AL504_RS07900	PF00175	Oxidoreductase NAD-binding domain 
AL504_RS07900	PF00970	Oxidoreductase FAD-binding domain
AL504_RS07900	PF00042	Globin
AL504_RS07920	PF00550	Phosphopantetheine attachment site
AL504_RS07935	PF07977	FabA-like domain
AL504_RS07965	PF01494	FAD binding domain
AL504_RS07975	PF02801	Beta-ketoacyl synthase, C-terminal domain
AL504_RS07975	PF00109	Beta-ketoacyl synthase, N-terminal domain
AL504_RS07990	PF02801	Beta-ketoacyl synthase, C-terminal domain
AL504_RS07990	PF00109	Beta-ketoacyl synthase, N-terminal domain
AL504_RS08000	PF09424	Yqey-like protein
AL504_RS08030	PF00990	Diguanylate cyclase, GGDEF domain
AL504_RS08040	PF14883	Hypothetical glycosyl hydrolase family 13
AL504_RS08040	PF01522	Polysaccharide deacetylase
AL504_RS08045	PF00535	Glycosyl transferase family 2
AL504_RS08055	PF07690	Major Facilitator Superfamily
AL504_RS08060	PF12833	Helix-turn-helix domain
AL504_RS08060	PF02311	AraC-like ligand binding domain
AL504_RS08065	PF00912	Transglycosylase
AL504_RS08065	PF00905	Penicillin binding protein transpeptidase domain
AL504_RS08065	PF17092	Penicillin-binding protein OB-like domain
AL504_RS08070	PF00149	Calcineurin-like phosphoesterase
AL504_RS08085	PF00248	Aldo/keto reductase family
AL504_RS08090	PF00005	ABC transporter
AL504_RS08090	PF00664	ABC transporter transmembrane region
AL504_RS08100	PF13593	SBF-like CPA transporter family (DUF4137)
AL504_RS08105	PF03466	LysR substrate binding domain
AL504_RS08105	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS08120	PF00005	ABC transporter
AL504_RS08130	PF02142	MGS-like domain
AL504_RS08130	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AL504_RS08130	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AL504_RS08145	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS08150	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS08150	PF03466	LysR substrate binding domain
AL504_RS08180	PF01037	Lrp/AsnC ligand binding domain
AL504_RS08205	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS08220	PF00583	Acetyltransferase (GNAT) family
AL504_RS08225	PF02567	Phenazine biosynthesis-like protein
AL504_RS08250	PF00293	NUDIX domain
AL504_RS08255	PF07690	Major Facilitator Superfamily
AL504_RS08280	PF00216	Bacterial DNA-binding protein
AL504_RS08285	PF17759	Phenylalanyl tRNA synthetase beta chain CLM domain
AL504_RS08285	PF03484	tRNA synthetase B5 domain
AL504_RS08285	PF03483	B3/4 domain
AL504_RS08285	PF01588	Putative tRNA binding domain
AL504_RS08285	PF03147	Ferredoxin-fold anticodon binding domain
AL504_RS08290	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
AL504_RS08290	PF01409	tRNA synthetases class II core domain (F)
AL504_RS08295	PF00453	Ribosomal protein L20
AL504_RS08300	PF01632	Ribosomal protein L35
AL504_RS08305	PF13335	Magnesium chelatase, subunit ChlI C-terminal
AL504_RS08305	PF01078	Magnesium chelatase, subunit ChlI
AL504_RS08310	PF04380	Membrane fusogenic activity
AL504_RS08320	PF00543	Nitrogen regulatory protein P-II
AL504_RS08325	PF00909	Ammonium Transporter Family
AL504_RS08330	PF00391	PEP-utilising enzyme, mobile domain
AL504_RS08330	PF02896	PEP-utilising enzyme, TIM barrel domain
AL504_RS08330	PF05524	PEP-utilising enzyme, N-terminal
AL504_RS08335	PF00381	PTS HPr component phosphorylation site
AL504_RS08345	PF02955	Prokaryotic glutathione synthetase, ATP-grasp domain
AL504_RS08345	PF02951	Prokaryotic glutathione synthetase, N-terminal domain
AL504_RS08350	PF05198	Translation initiation factor IF-3, N-terminal domain
AL504_RS08350	PF00707	Translation initiation factor IF-3, C-terminal domain
AL504_RS08355	PF03129	Anticodon binding domain
AL504_RS08355	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AL504_RS08355	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
AL504_RS08355	PF02824	TGS domain
AL504_RS08365	PF00196	Bacterial regulatory proteins, luxR family
AL504_RS08365	PF00072	Response regulator receiver domain
AL504_RS08370	PF04055	Radical SAM superfamily
AL504_RS08370	PF06969	HemN C-terminal domain
AL504_RS08375	PF07739	TipAS antibiotic-recognition domain
AL504_RS08375	PF13411	MerR HTH family regulatory protein
AL504_RS08390	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS08390	PF07729	FCD domain
AL504_RS08395	PF00205	Thiamine pyrophosphate enzyme, central domain
AL504_RS08395	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AL504_RS08395	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AL504_RS08400	PF01546	Peptidase family M20/M25/M40
AL504_RS08400	PF07687	Peptidase dimerisation domain
AL504_RS08405	PF00171	Aldehyde dehydrogenase family
AL504_RS08410	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL504_RS08415	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS08420	PF12911	N-terminal TM domain of oligopeptide transport permease C
AL504_RS08420	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS08425	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL504_RS08425	PF00005	ABC transporter
AL504_RS08430	PF07883	Cupin domain
AL504_RS08435	PF00850	Histone deacetylase domain
AL504_RS08440	PF00892	EamA-like transporter family
AL504_RS08445	PF00356	Bacterial regulatory proteins, lacI family
AL504_RS08445	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
AL504_RS08450	PF04290	Tripartite ATP-independent periplasmic transporters, DctQ component
AL504_RS08455	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
AL504_RS08460	PF03480	Bacterial extracellular solute-binding protein, family 7
AL504_RS08465	PF00920	Dehydratase family
AL504_RS08470	PF07859	alpha/beta hydrolase fold
AL504_RS08470	PF13472	GDSL-like Lipase/Acylhydrolase family
AL504_RS08490	PF01966	HD domain
AL504_RS08515	PF03480	Bacterial extracellular solute-binding protein, family 7
AL504_RS08520	PF01416	tRNA pseudouridine synthase
AL504_RS08535	PF01118	Semialdehyde dehydrogenase, NAD binding domain
AL504_RS08535	PF02774	Semialdehyde dehydrogenase, dimerisation domain
AL504_RS08540	PF00180	Isocitrate/isopropylmalate dehydrogenase
AL504_RS08545	PF00694	Aconitase C-terminal domain
AL504_RS08550	PF00330	Aconitase family (aconitate hydratase)
AL504_RS08555	PF01435	Peptidase family M48
AL504_RS08560	PF01264	Chorismate synthase
AL504_RS08565	PF00563	EAL domain
AL504_RS08565	PF00990	Diguanylate cyclase, GGDEF domain
AL504_RS08565	PF03707	Bacterial signalling protein N terminal repeat
AL504_RS08570	PF07694	5TMR of 5TMR-LYT
AL504_RS08570	PF00990	Diguanylate cyclase, GGDEF domain
AL504_RS08575	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS08575	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS08580	PF00486	Transcriptional regulatory protein, C terminal
AL504_RS08580	PF00072	Response regulator receiver domain
AL504_RS08585	PF02696	Uncharacterized ACR, YdiU/UPF0061 family
AL504_RS08595	PF03631	Virulence factor BrkB
AL504_RS08605	PF01207	Dihydrouridine synthase (Dus)
AL504_RS08610	PF01636	Phosphotransferase enzyme family
AL504_RS08630	PF00437	Type II/IV secretion system protein
AL504_RS08635	PF04972	BON domain
AL504_RS08635	PF13629	Pilus formation protein N terminal region
AL504_RS08635	PF00263	Bacterial type II and III secretion system protein
AL504_RS08830	PF04233	Phage Mu protein F like protein
AL504_RS08890	PF13391	HNH endonuclease
AL504_RS08945	PF03837	RecT family
AL504_RS08955	PF17762	HTH domain found in ParB protein
AL504_RS08955	PF02195	ParB-like nuclease domain
AL504_RS08970	PF01757	Acyltransferase family
AL504_RS08975	PF07690	Major Facilitator Superfamily
AL504_RS08985	PF13439	Glycosyltransferase Family 4
AL504_RS08985	PF00534	Glycosyl transferases group 1
AL504_RS09000	PF04542	Sigma-70 region 2 
AL504_RS09000	PF04539	Sigma-70 region 3
AL504_RS09000	PF04546	Sigma-70, non-essential region
AL504_RS09000	PF04545	Sigma-70, region 4
AL504_RS09000	PF03979	Sigma-70 factor, region 1.1
AL504_RS09000	PF00140	Sigma-70 factor, region 1.2
AL504_RS09005	PF08275	DNA primase catalytic core, N-terminal domain
AL504_RS09005	PF01807	CHC2 zinc finger
AL504_RS09005	PF08278	DNA primase DnaG DnaB-binding 
AL504_RS09005	PF10410	DnaB-helicase binding domain of primase
AL504_RS09010	PF01165	Ribosomal protein S21
AL504_RS09015	PF00156	Phosphoribosyl transferase domain
AL504_RS09020	PF00709	Adenylosuccinate synthetase
AL504_RS09025	PF13393	Histidyl-tRNA synthetase
AL504_RS09030	PF01145	SPFH domain / Band 7 family
AL504_RS09035	PF12221	Bacterial membrane protein N terminal
AL504_RS09035	PF01145	SPFH domain / Band 7 family
AL504_RS09040	PF16360	GTP-binding GTPase Middle Region
AL504_RS09040	PF13167	GTP-binding GTPase N-terminal
AL504_RS09040	PF01926	50S ribosome-binding GTPase
AL504_RS09045	PF17209	Hfq protein
AL504_RS09050	PF00155	Aminotransferase class I and II
AL504_RS09055	PF01926	50S ribosome-binding GTPase
AL504_RS09055	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
AL504_RS09060	PF13360	PQQ-like domain
AL504_RS09065	PF09976	Tetratricopeptide repeat-like domain
AL504_RS09070	PF13393	Histidyl-tRNA synthetase
AL504_RS09070	PF03129	Anticodon binding domain
AL504_RS09075	PF04551	GcpE protein
AL504_RS09085	PF04055	Radical SAM superfamily
AL504_RS09090	PF00334	Nucleoside diphosphate kinase
AL504_RS09095	PF10458	Valyl tRNA synthetase tRNA binding arm
AL504_RS09095	PF00133	tRNA synthetases class I (I, L, M and V)
AL504_RS09095	PF08264	Anticodon-binding domain of tRNA
AL504_RS09100	PF01266	FAD dependent oxidoreductase
AL504_RS09105	PF00005	ABC transporter
AL504_RS09110	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS09115	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL504_RS09125	PF01746	tRNA (Guanine-1)-methyltransferase
AL504_RS09130	PF01782	RimM N-terminal domain
AL504_RS09135	PF00886	Ribosomal protein S16
AL504_RS09145	PF01206	Sulfurtransferase TusA
AL504_RS09160	PF13416	Bacterial extracellular solute-binding protein
AL504_RS09165	PF01266	FAD dependent oxidoreductase
AL504_RS09170	PF00970	Oxidoreductase FAD-binding domain
AL504_RS09170	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL504_RS09170	PF00175	Oxidoreductase NAD-binding domain 
AL504_RS09175	PF02261	Aspartate decarboxylase
AL504_RS09180	PF00893	Small Multidrug Resistance protein
AL504_RS09185	PF03476	MOSC N-terminal beta barrel domain
AL504_RS09185	PF03473	MOSC domain
AL504_RS09185	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL504_RS09190	PF05721	Phytanoyl-CoA dioxygenase (PhyH)
AL504_RS09195	PF06339	Ectoine synthase
AL504_RS09200	PF00202	Aminotransferase class-III
AL504_RS09205	PF00583	Acetyltransferase (GNAT) family
AL504_RS09210	PF12802	MarR family
AL504_RS09220	PF00202	Aminotransferase class-III
AL504_RS09230	PF00440	Bacterial regulatory proteins, tetR family
AL504_RS09230	PF08359	YsiA-like protein, C-terminal region
AL504_RS09235	PF00521	DNA gyrase/topoisomerase IV, subunit A
AL504_RS09245	PF00986	DNA gyrase B subunit, carboxyl terminus
AL504_RS09245	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS09245	PF01751	Toprim domain
AL504_RS09245	PF00204	DNA gyrase B
AL504_RS09250	PF00085	Thioredoxin
AL504_RS09255	PF07498	Rho termination factor, N-terminal domain
AL504_RS09255	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AL504_RS09255	PF07497	Rho termination factor, RNA-binding domain
AL504_RS09270	PF08335	GlnD PII-uridylyltransferase
AL504_RS09270	PF03710	Glutamate-ammonia ligase adenylyltransferase
AL504_RS09275	PF02677	Epoxyqueuosine reductase QueH
AL504_RS09280	PF14525	AraC-binding-like domain
AL504_RS09290	PF02975	Methylamine dehydrogenase, L chain
AL504_RS09295	PF00578	AhpC/TSA family
AL504_RS09305	PF06433	Methylamine dehydrogenase heavy chain (MADH)
AL504_RS09315	PF00171	Aldehyde dehydrogenase family
AL504_RS09320	PF00107	Zinc-binding dehydrogenase
AL504_RS09320	PF08240	Alcohol dehydrogenase GroES-like domain
AL504_RS09335	PF01047	MarR family
AL504_RS09340	PF02321	Outer membrane efflux protein
AL504_RS09345	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
AL504_RS09345	PF00529	HlyD membrane-fusion protein of T1SS
AL504_RS09350	PF07690	Major Facilitator Superfamily
AL504_RS09360	PF00180	Isocitrate/isopropylmalate dehydrogenase
AL504_RS09365	PF05872	Bacterial protein of unknown function (DUF853)
AL504_RS09370	PF01709	Transcriptional regulator
AL504_RS09375	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
AL504_RS09375	PF02844	Phosphoribosylglycinamide synthetase, N domain
AL504_RS09375	PF02843	Phosphoribosylglycinamide synthetase, C domain
AL504_RS09380	PF01218	Coproporphyrinogen III oxidase
AL504_RS09385	PF01467	Cytidylyltransferase-like
AL504_RS09395	PF02590	Predicted SPOUT methyltransferase
AL504_RS09400	PF02545	Maf-like protein
AL504_RS09405	PF00375	Sodium:dicarboxylate symporter family
AL504_RS09410	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS09410	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS09410	PF02743	Cache domain
AL504_RS09415	PF00072	Response regulator receiver domain
AL504_RS09415	PF02954	Bacterial regulatory protein, Fis family
AL504_RS09415	PF00158	Sigma-54 interaction domain
AL504_RS09445	PF00575	S1 RNA binding domain
AL504_RS09445	PF10150	Ribonuclease E/G family
AL504_RS09515	PF06791	Prophage tail length tape measure protein
AL504_RS09700	PF03837	RecT family
AL504_RS09765	PF11254	Protein of unknown function (DUF3053)
AL504_RS09770	PF01590	GAF domain
AL504_RS09770	PF00360	Phytochrome region
AL504_RS09770	PF00563	EAL domain
AL504_RS09770	PF00990	Diguanylate cyclase, GGDEF domain
AL504_RS09775	PF03707	Bacterial signalling protein N terminal repeat
AL504_RS09775	PF00990	Diguanylate cyclase, GGDEF domain
AL504_RS09775	PF00563	EAL domain
AL504_RS09785	PF02254	TrkA-N domain
AL504_RS09785	PF00999	Sodium/hydrogen exchanger family
AL504_RS09790	PF00664	ABC transporter transmembrane region
AL504_RS09790	PF00005	ABC transporter
AL504_RS09805	PF03692	Putative zinc- or iron-chelating domain
AL504_RS09815	PF01522	Polysaccharide deacetylase
AL504_RS09825	PF00535	Glycosyl transferase family 2
AL504_RS09830	PF01522	Polysaccharide deacetylase
AL504_RS09835	PF00534	Glycosyl transferases group 1
AL504_RS09840	PF01336	OB-fold nucleic acid binding domain
AL504_RS09840	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
AL504_RS09840	PF07733	Bacterial DNA polymerase III alpha NTPase domain
AL504_RS09840	PF02811	PHP domain
AL504_RS09840	PF14579	Helix-hairpin-helix motif
AL504_RS09850	PF00005	ABC transporter
AL504_RS09855	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS09860	PF11898	Domain of unknown function (DUF3418)
AL504_RS09860	PF07717	Oligonucleotide/oligosaccharide-binding (OB)-fold
AL504_RS09860	PF04408	Helicase associated domain (HA2)
AL504_RS09860	PF00271	Helicase conserved C-terminal domain
AL504_RS09860	PF00270	DEAD/DEAH box helicase
AL504_RS09865	PF00696	Amino acid kinase family
AL504_RS09865	PF00583	Acetyltransferase (GNAT) family
AL504_RS09870	PF04362	Bacterial Fe(2+) trafficking
AL504_RS09880	PF01895	PhoU domain
AL504_RS09885	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
AL504_RS09890	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL504_RS09890	PF02770	Acyl-CoA dehydrogenase, middle domain
AL504_RS09890	PF18158	Adaptive response protein AidB N-terminal domain
AL504_RS09895	PF01425	Amidase
AL504_RS09900	PF02646	RmuC family
AL504_RS09920	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS09925	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS09930	PF08402	TOBE domain
AL504_RS09930	PF00005	ABC transporter
AL504_RS09935	PF13416	Bacterial extracellular solute-binding protein
AL504_RS09955	PF03480	Bacterial extracellular solute-binding protein, family 7
AL504_RS09965	PF04290	Tripartite ATP-independent periplasmic transporters, DctQ component
AL504_RS09965	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
AL504_RS09975	PF00202	Aminotransferase class-III
AL504_RS09980	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
AL504_RS09980	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
AL504_RS09985	PF12697	Alpha/beta hydrolase family
AL504_RS10005	PF04909	Amidohydrolase
AL504_RS10010	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS10010	PF03466	LysR substrate binding domain
AL504_RS10015	PF00672	HAMP domain
AL504_RS10015	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS10015	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS10020	PF00486	Transcriptional regulatory protein, C terminal
AL504_RS10020	PF00072	Response regulator receiver domain
AL504_RS10025	PF00873	AcrB/AcrD/AcrF family
AL504_RS10030	PF13533	Biotin-lipoyl like
AL504_RS10035	PF02321	Outer membrane efflux protein
AL504_RS10040	PF00764	Arginosuccinate synthase
AL504_RS10045	PF02705	K+ potassium transporter
AL504_RS10050	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS10050	PF08521	Two-component sensor kinase N-terminal
AL504_RS10050	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS10055	PF00072	Response regulator receiver domain
AL504_RS10055	PF00486	Transcriptional regulatory protein, C terminal
AL504_RS10060	PF02472	Biopolymer transport protein ExbD/TolR
AL504_RS10065	PF01618	MotA/TolQ/ExbB proton channel family
AL504_RS10080	PF00216	Bacterial DNA-binding protein
AL504_RS10085	PF18331	PKHD-type hydroxylase C-terminal domain
AL504_RS10085	PF13640	2OG-Fe(II) oxygenase superfamily
AL504_RS10090	PF01053	Cys/Met metabolism PLP-dependent enzyme
AL504_RS10095	PF08032	RNA 2'-O ribose methyltransferase substrate binding
AL504_RS10095	PF00588	SpoU rRNA Methylase family
AL504_RS10100	PF08461	Ribonuclease R winged-helix domain
AL504_RS10100	PF17876	Cold shock domain
AL504_RS10100	PF08206	Ribonuclease B OB domain
AL504_RS10100	PF00773	RNB domain
AL504_RS10100	PF00575	S1 RNA binding domain
AL504_RS10120	PF13673	Acetyltransferase (GNAT) domain
AL504_RS10130	PF03547	Membrane transport protein
AL504_RS10135	PF04143	Sulphur transport
AL504_RS10140	PF01645	Conserved region in glutamate synthase
AL504_RS10145	PF13091	PLD-like domain
AL504_RS10145	PF13396	Phospholipase_D-nuclease N-terminal
AL504_RS10200	PF00892	EamA-like transporter family
AL504_RS10210	PF00563	EAL domain
AL504_RS10210	PF00990	Diguanylate cyclase, GGDEF domain
AL504_RS10210	PF03707	Bacterial signalling protein N terminal repeat
AL504_RS10230	PF00589	Phage integrase family
AL504_RS10330	PF01594	AI-2E family transporter
AL504_RS10360	PF01322	Cytochrome C'
AL504_RS10365	PF08328	Adenylosuccinate lyase C-terminal
AL504_RS10365	PF00206	Lyase
AL504_RS10370	PF13417	Glutathione S-transferase, N-terminal domain
AL504_RS10370	PF00043	Glutathione S-transferase, C-terminal domain
AL504_RS10375	PF01925	Sulfite exporter TauE/SafE
AL504_RS10385	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS10385	PF03466	LysR substrate binding domain
AL504_RS10390	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS10400	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
AL504_RS10400	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
AL504_RS10405	PF12769	4TM region of pyridine nucleotide transhydrogenase, mitoch
AL504_RS10415	PF02754	Cysteine-rich domain
AL504_RS10415	PF13183	4Fe-4S dicluster domain
AL504_RS10425	PF01565	FAD binding domain 
AL504_RS10425	PF02913	FAD linked oxidases, C-terminal domain
AL504_RS10430	PF02913	FAD linked oxidases, C-terminal domain
AL504_RS10430	PF01565	FAD binding domain 
AL504_RS10435	PF00793	DAHP synthetase I family
AL504_RS10440	PF01523	Putative modulator of DNA gyrase
AL504_RS10445	PF00816	H-NS histone family
AL504_RS10455	PF01433	Peptidase family M1 domain
AL504_RS10455	PF17432	Domain of unknown function (DUF3458_C) ARM repeats
AL504_RS10455	PF11940	Domain of unknown function (DUF3458) Ig-like fold
AL504_RS10470	PF14821	Threonine synthase N terminus
AL504_RS10470	PF00291	Pyridoxal-phosphate dependent enzyme
AL504_RS10475	PF03447	Homoserine dehydrogenase, NAD binding domain
AL504_RS10475	PF01842	ACT domain
AL504_RS10475	PF00742	Homoserine dehydrogenase
AL504_RS10480	PF00155	Aminotransferase class I and II
AL504_RS10490	PF00578	AhpC/TSA family
AL504_RS10500	PF13638	PIN domain
AL504_RS10500	PF02562	PhoH-like protein
AL504_RS10510	PF01557	Fumarylacetoacetate (FAA) hydrolase family
AL504_RS10520	PF02653	Branched-chain amino acid transport system / permease component
AL504_RS10525	PF00005	ABC transporter
AL504_RS10530	PF12399	Branched-chain amino acid ATP-binding cassette transporter
AL504_RS10530	PF00005	ABC transporter
AL504_RS10560	PF00719	Inorganic pyrophosphatase
AL504_RS10580	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
AL504_RS10580	PF03900	Porphobilinogen deaminase, C-terminal domain
AL504_RS10585	PF03741	Integral membrane protein TerC family
AL504_RS10590	PF03741	Integral membrane protein TerC family
AL504_RS10595	PF00549	CoA-ligase
AL504_RS10595	PF02629	CoA binding domain
AL504_RS10600	PF00549	CoA-ligase
AL504_RS10600	PF08442	ATP-grasp domain
AL504_RS10615	PF01717	Cobalamin-independent synthase, Catalytic domain
AL504_RS10615	PF08267	Cobalamin-independent synthase, N-terminal domain
AL504_RS10620	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS10620	PF03466	LysR substrate binding domain
AL504_RS10625	PF02631	RecX family
AL504_RS10630	PF00154	recA bacterial DNA recombination protein
AL504_RS10635	PF00072	Response regulator receiver domain
AL504_RS10635	PF00486	Transcriptional regulatory protein, C terminal
AL504_RS10640	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS10640	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS10645	PF00083	Sugar (and other) transporter
AL504_RS10645	PF08946	Osmosensory transporter coiled coil
AL504_RS10655	PF04381	Putative exonuclease, RdgC
AL504_RS10660	PF00990	Diguanylate cyclase, GGDEF domain
AL504_RS10665	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
AL504_RS10665	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
AL504_RS10750	PF13404	AsnC-type helix-turn-helix domain
AL504_RS10750	PF01037	Lrp/AsnC ligand binding domain
AL504_RS10760	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
AL504_RS10765	PF13593	SBF-like CPA transporter family (DUF4137)
AL504_RS10770	PF00772	DnaB-like helicase N terminal domain
AL504_RS10770	PF03796	DnaB-like helicase C terminal domain
AL504_RS10780	PF01281	Ribosomal protein L9, N-terminal domain
AL504_RS10780	PF03948	Ribosomal protein L9, C-terminal domain
AL504_RS10785	PF01084	Ribosomal protein S18
AL504_RS10795	PF01250	Ribosomal protein S6
AL504_RS10800	PF05675	Protein of unknown function (DUF817)
AL504_RS10805	PF02649	Type I GTP cyclohydrolase folE2
AL504_RS10810	PF02780	Transketolase, C-terminal domain
AL504_RS10810	PF02779	Transketolase, pyrimidine binding domain
AL504_RS10810	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
AL504_RS10815	PF00348	Polyprenyl synthetase
AL504_RS10820	PF02609	Exonuclease VII small subunit
AL504_RS10830	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS10845	PF01266	FAD dependent oxidoreductase
AL504_RS10855	PF13419	Haloacid dehalogenase-like hydrolase
AL504_RS10865	PF08402	TOBE domain
AL504_RS10865	PF00005	ABC transporter
AL504_RS10870	PF03466	LysR substrate binding domain
AL504_RS10870	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS10880	PF00581	Rhodanese-like domain
AL504_RS10890	PF01435	Peptidase family M48
AL504_RS10895	PF03313	Serine dehydratase alpha chain
AL504_RS10895	PF03315	Serine dehydratase beta chain
AL504_RS10900	PF02690	Na+/Pi-cotransporter
AL504_RS10905	PF00665	Integrase core domain
AL504_RS10915	PF01738	Dienelactone hydrolase family
AL504_RS10925	PF01367	5'-3' exonuclease, C-terminal SAM fold
AL504_RS10925	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
AL504_RS10925	PF00476	DNA polymerase family A
AL504_RS10925	PF01612	3'-5' exonuclease
AL504_RS10930	PF03641	Possible lysine decarboxylase
AL504_RS10935	PF01546	Peptidase family M20/M25/M40
AL504_RS10940	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS10945	PF03466	LysR substrate binding domain
AL504_RS10945	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS10950	PF03466	LysR substrate binding domain
AL504_RS10950	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS10960	PF03144	Elongation factor Tu domain 2
AL504_RS10960	PF00679	Elongation factor G C-terminus
AL504_RS10960	PF00009	Elongation factor Tu GTP binding domain
AL504_RS10965	PF16198	tRNA pseudouridylate synthase B C-terminal domain
AL504_RS10965	PF01509	TruB family pseudouridylate synthase (N terminal domain)
AL504_RS10970	PF02033	Ribosome-binding factor A
AL504_RS10980	PF13184	NusA-like KH domain
AL504_RS10980	PF08529	NusA N-terminal domain
AL504_RS10985	PF17384	RimP C-terminal SH3 domain
AL504_RS10985	PF02576	RimP N-terminal domain
AL504_RS10990	PF01479	S4 domain
AL504_RS10990	PF00849	RNA pseudouridylate synthase
AL504_RS10995	PF04079	Segregation and condensation complex subunit ScpB
AL504_RS11005	PF03466	LysR substrate binding domain
AL504_RS11005	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS11010	PF07683	Cobalamin synthesis protein cobW C-terminal domain
AL504_RS11010	PF02492	CobW/HypB/UreG, nucleotide-binding domain
AL504_RS11015	PF07683	Cobalamin synthesis protein cobW C-terminal domain
AL504_RS11015	PF02492	CobW/HypB/UreG, nucleotide-binding domain
AL504_RS11030	PF00486	Transcriptional regulatory protein, C terminal
AL504_RS11030	PF00072	Response regulator receiver domain
AL504_RS11035	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS11035	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS11035	PF08521	Two-component sensor kinase N-terminal
AL504_RS11040	PF13180	PDZ domain
AL504_RS11040	PF17820	PDZ domain
AL504_RS11045	PF14497	Glutathione S-transferase, C-terminal domain
AL504_RS11045	PF02798	Glutathione S-transferase, N-terminal domain
AL504_RS11050	PF02401	LytB protein
AL504_RS11060	PF04002	RadC-like JAB domain
AL504_RS11065	PF04199	Putative cyclase
AL504_RS11070	PF03301	Tryptophan 2,3-dioxygenase
AL504_RS11075	PF01197	Ribosomal protein L31
AL504_RS11085	PF01554	MatE
AL504_RS11090	PF00501	AMP-binding enzyme
AL504_RS11090	PF14535	AMP-binding enzyme C-terminal domain
AL504_RS11095	PF03061	Thioesterase superfamily
AL504_RS11100	PF00378	Enoyl-CoA hydratase/isomerase
AL504_RS11105	PF00171	Aldehyde dehydrogenase family
AL504_RS11110	PF00175	Oxidoreductase NAD-binding domain 
AL504_RS11110	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL504_RS11110	PF00970	Oxidoreductase FAD-binding domain
AL504_RS11115	PF01883	Iron-sulfur cluster assembly protein
AL504_RS11120	PF05138	Phenylacetic acid catabolic protein
AL504_RS11125	PF06243	Phenylacetic acid degradation B
AL504_RS11130	PF05138	Phenylacetic acid catabolic protein
AL504_RS11135	PF08223	PaaX-like protein C-terminal domain
AL504_RS11135	PF07848	PaaX-like protein
AL504_RS11140	PF03853	YjeF-related protein N-terminus
AL504_RS11145	PF00929	Exonuclease
AL504_RS11150	PF01435	Peptidase family M48
AL504_RS11155	PF03193	RsgA GTPase
AL504_RS11160	PF00293	NUDIX domain
AL504_RS11165	PF01245	Ribosomal protein L19
AL504_RS11180	PF04055	Radical SAM superfamily
AL504_RS11185	PF00009	Elongation factor Tu GTP binding domain
AL504_RS11190	PF01507	Phosphoadenosine phosphosulfate reductase family
AL504_RS11195	PF01507	Phosphoadenosine phosphosulfate reductase family
AL504_RS11200	PF17850	CysA C-terminal regulatory domain
AL504_RS11200	PF12857	TOBE-like domain
AL504_RS11200	PF00005	ABC transporter
AL504_RS11205	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS11210	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS11220	PF00578	AhpC/TSA family
AL504_RS11220	PF10417	C-terminal domain of 1-Cys peroxiredoxin
AL504_RS11225	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL504_RS11225	PF12806	Acetyl-CoA dehydrogenase C-terminal like
AL504_RS11225	PF02770	Acyl-CoA dehydrogenase, middle domain
AL504_RS11225	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL504_RS11230	PF02080	TrkA-C domain
AL504_RS11230	PF06826	Predicted Permease Membrane Region
AL504_RS11235	PF00155	Aminotransferase class I and II
AL504_RS11240	PF06826	Predicted Permease Membrane Region
AL504_RS11245	PF00766	Electron transfer flavoprotein FAD-binding domain
AL504_RS11245	PF01012	Electron transfer flavoprotein domain
AL504_RS11250	PF01012	Electron transfer flavoprotein domain
AL504_RS11255	PF00850	Histone deacetylase domain
AL504_RS11260	PF13406	Transglycosylase SLT domain
AL504_RS11275	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS11280	PF00291	Pyridoxal-phosphate dependent enzyme
AL504_RS11290	PF01370	NAD dependent epimerase/dehydratase family
AL504_RS11295	PF00294	pfkB family carbohydrate kinase
AL504_RS11300	PF18073	Rubredoxin metal binding domain
AL504_RS11310	PF00216	Bacterial DNA-binding protein
AL504_RS11315	PF00575	S1 RNA binding domain
AL504_RS11320	PF02224	Cytidylate kinase
AL504_RS11325	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
AL504_RS11335	PF00155	Aminotransferase class I and II
AL504_RS11340	PF01842	ACT domain
AL504_RS11340	PF01817	Chorismate mutase type II
AL504_RS11340	PF00800	Prephenate dehydratase
AL504_RS11345	PF00266	Aminotransferase class-V
AL504_RS11350	PF03989	DNA gyrase C-terminal domain, beta-propeller
AL504_RS11350	PF00521	DNA gyrase/topoisomerase IV, subunit A
AL504_RS11355	PF00691	OmpA family
AL504_RS11365	PF13419	Haloacid dehalogenase-like hydrolase
AL504_RS11370	PF07690	Major Facilitator Superfamily
AL504_RS11385	PF01545	Cation efflux family
AL504_RS11395	PF13406	Transglycosylase SLT domain
AL504_RS11410	PF00005	ABC transporter
AL504_RS11410	PF00664	ABC transporter transmembrane region
AL504_RS11415	PF08245	Mur ligase middle domain
AL504_RS11415	PF08443	RimK-like ATP-grasp domain
AL504_RS11415	PF02875	Mur ligase family, glutamate ligase domain
AL504_RS11420	PF08443	RimK-like ATP-grasp domain
AL504_RS11420	PF08245	Mur ligase middle domain
AL504_RS11420	PF02875	Mur ligase family, glutamate ligase domain
AL504_RS11425	PF05532	CsbD-like
AL504_RS11430	PF04972	BON domain
AL504_RS11435	PF02567	Phenazine biosynthesis-like protein
AL504_RS11445	PF04829	Pre-toxin domain with VENN motif
AL504_RS11445	PF05860	haemagglutination activity domain
AL504_RS11445	PF13332	Hemagglutinin repeat
AL504_RS11450	PF08479	POTRA domain, ShlB-type
AL504_RS11450	PF17287	POTRA domain
AL504_RS11450	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
AL504_RS11470	PF10634	Fe2+ transport protein
AL504_RS11475	PF05233	PHB accumulation regulatory domain
AL504_RS11475	PF07879	PHB/PHA accumulation regulator DNA-binding domain
AL504_RS11480	PF00106	short chain dehydrogenase
AL504_RS11485	PF07167	Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus
AL504_RS11490	PF02578	Multi-copper polyphenol oxidoreductase laccase
AL504_RS11495	PF01479	S4 domain
AL504_RS11495	PF00849	RNA pseudouridylate synthase
AL504_RS11500	PF13525	Outer membrane lipoprotein
AL504_RS11505	PF04851	Type III restriction enzyme, res subunit
AL504_RS11505	PF13307	Helicase C-terminal domain
AL504_RS11520	PF00579	tRNA synthetases class I (W and Y)
AL504_RS11545	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS11545	PF00593	TonB dependent receptor
AL504_RS11550	PF16220	Domain of unknown function (DUF4880)
AL504_RS11550	PF04773	FecR protein
AL504_RS11555	PF04542	Sigma-70 region 2 
AL504_RS11555	PF08281	Sigma-70, region 4
AL504_RS11560	PF03969	AFG1-like ATPase
AL504_RS11565	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL504_RS11565	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AL504_RS11575	PF16870	2-oxoglutarate dehydrogenase C-terminal
AL504_RS11575	PF16078	2-oxoglutarate dehydrogenase N-terminus
AL504_RS11575	PF02779	Transketolase, pyrimidine binding domain
AL504_RS11575	PF00676	Dehydrogenase E1 component
AL504_RS11580	PF01037	Lrp/AsnC ligand binding domain
AL504_RS11580	PF13404	AsnC-type helix-turn-helix domain
AL504_RS11585	PF00291	Pyridoxal-phosphate dependent enzyme
AL504_RS11595	PF07687	Peptidase dimerisation domain
AL504_RS11595	PF01546	Peptidase family M20/M25/M40
AL504_RS11600	PF07687	Peptidase dimerisation domain
AL504_RS11600	PF01546	Peptidase family M20/M25/M40
AL504_RS11605	PF03169	OPT oligopeptide transporter protein
AL504_RS11615	PF01515	Phosphate acetyl/butaryl transferase
AL504_RS11615	PF00390	Malic enzyme, N-terminal domain
AL504_RS11615	PF03949	Malic enzyme, NAD binding domain
AL504_RS11630	PF00285	Citrate synthase, C-terminal domain
AL504_RS11635	PF03937	Flavinator of succinate dehydrogenase
AL504_RS11640	PF13085	2Fe-2S iron-sulfur cluster binding domain
AL504_RS11645	PF02910	Fumarate reductase flavoprotein C-term
AL504_RS11645	PF00890	FAD binding domain
AL504_RS11650	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
AL504_RS11655	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
AL504_RS11660	PF07702	UTRA domain
AL504_RS11660	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS11665	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
AL504_RS11665	PF00056	lactate/malate dehydrogenase, NAD binding domain
AL504_RS11675	PF00285	Citrate synthase, C-terminal domain
AL504_RS11680	PF03972	MmgE/PrpD family
AL504_RS11685	PF03653	Uncharacterised protein family (UPF0093)
AL504_RS11690	PF01170	Putative RNA methylase family UPF0020
AL504_RS11690	PF02926	THUMP domain
AL504_RS11720	PF00501	AMP-binding enzyme
AL504_RS11720	PF13193	AMP-binding enzyme C-terminal domain
AL504_RS11730	PF01430	Hsp33 protein
AL504_RS11740	PF00113	Enolase, C-terminal TIM barrel domain
AL504_RS11740	PF03952	Enolase, N-terminal domain
AL504_RS11750	PF00117	Glutamine amidotransferase class-I
AL504_RS11750	PF06418	CTP synthase N-terminus
AL504_RS11760	PF01321	Creatinase/Prolidase N-terminal domain
AL504_RS11760	PF00557	Metallopeptidase family M24
AL504_RS11770	PF03576	Peptidase family S58 
AL504_RS11775	PF12911	N-terminal TM domain of oligopeptide transport permease C
AL504_RS11775	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS11780	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS11785	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL504_RS11790	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL504_RS11790	PF00005	ABC transporter
AL504_RS11795	PF01112	Asparaginase
AL504_RS11805	PF13673	Acetyltransferase (GNAT) domain
AL504_RS11810	PF01144	Coenzyme A transferase
AL504_RS11815	PF01144	Coenzyme A transferase
AL504_RS11830	PF01370	NAD dependent epimerase/dehydratase family
AL504_RS11850	PF00202	Aminotransferase class-III
AL504_RS11855	PF01212	Beta-eliminating lyase
AL504_RS11860	PF00892	EamA-like transporter family
AL504_RS11865	PF16177	Acetyl-coenzyme A synthetase N-terminus
AL504_RS11865	PF13193	AMP-binding enzyme C-terminal domain
AL504_RS11865	PF00501	AMP-binding enzyme
AL504_RS11875	PF03928	Haem-degrading
AL504_RS11880	PF16177	Acetyl-coenzyme A synthetase N-terminus
AL504_RS11880	PF13193	AMP-binding enzyme C-terminal domain
AL504_RS11880	PF00501	AMP-binding enzyme
AL504_RS11885	PF00877	NlpC/P60 family
AL504_RS11895	PF03466	LysR substrate binding domain
AL504_RS11895	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS11900	PF00171	Aldehyde dehydrogenase family
AL504_RS11910	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS11920	PF00883	Cytosol aminopeptidase family, catalytic domain
AL504_RS11920	PF02789	Cytosol aminopeptidase family, N-terminal domain
AL504_RS11935	PF01027	Inhibitor of apoptosis-promoting Bax1
AL504_RS11950	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS11960	PF00291	Pyridoxal-phosphate dependent enzyme
AL504_RS11970	PF02565	Recombination protein O C terminal
AL504_RS11970	PF11967	Recombination protein O N terminal
AL504_RS11975	PF07650	KH domain
AL504_RS11975	PF01926	50S ribosome-binding GTPase
AL504_RS11980	PF00035	Double-stranded RNA binding motif
AL504_RS11980	PF14622	Ribonuclease-III-like
AL504_RS11985	PF10502	Signal peptidase, peptidase S26 
AL504_RS11990	PF00679	Elongation factor G C-terminus
AL504_RS11990	PF00009	Elongation factor Tu GTP binding domain
AL504_RS11990	PF03144	Elongation factor Tu domain 2
AL504_RS11990	PF06421	GTP-binding protein LepA C-terminus
AL504_RS11995	PF13180	PDZ domain
AL504_RS12010	PF08281	Sigma-70, region 4
AL504_RS12010	PF04542	Sigma-70 region 2 
AL504_RS12020	PF00109	Beta-ketoacyl synthase, N-terminal domain
AL504_RS12020	PF02801	Beta-ketoacyl synthase, C-terminal domain
AL504_RS12025	PF00550	Phosphopantetheine attachment site
AL504_RS12035	PF00698	Acyl transferase domain
AL504_RS12040	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
AL504_RS12040	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
AL504_RS12045	PF02504	Fatty acid synthesis protein
AL504_RS12050	PF01783	Ribosomal L32p protein family
AL504_RS12060	PF02545	Maf-like protein
AL504_RS12065	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
AL504_RS12070	PF01510	N-acetylmuramoyl-L-alanine amidase
AL504_RS12075	PF01794	Ferric reductase like transmembrane component
AL504_RS12080	PF00174	Oxidoreductase molybdopterin binding domain
AL504_RS12085	PF13419	Haloacid dehalogenase-like hydrolase
AL504_RS12090	PF01479	S4 domain
AL504_RS12090	PF00849	RNA pseudouridylate synthase
AL504_RS12105	PF00665	Integrase core domain
AL504_RS12105	PF13276	HTH-like domain
AL504_RS12105	PF13333	Integrase core domain
AL504_RS12110	PF09411	Lipid A 3-O-deacylase (PagL)
AL504_RS12115	PF01039	Carboxyl transferase domain
AL504_RS12115	PF17848	Acetyl-coA carboxylase zinc finger domain
AL504_RS12120	PF00290	Tryptophan synthase alpha chain
AL504_RS12125	PF00291	Pyridoxal-phosphate dependent enzyme
AL504_RS12130	PF07687	Peptidase dimerisation domain
AL504_RS12130	PF01546	Peptidase family M20/M25/M40
AL504_RS12135	PF07690	Major Facilitator Superfamily
AL504_RS12145	PF06167	Glucose-regulated metallo-peptidase M90
AL504_RS12155	PF01042	Endoribonuclease L-PSP
AL504_RS12160	PF17767	Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain
AL504_RS12160	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
AL504_RS12165	PF11953	Domain of unknown function (DUF3470)
AL504_RS12165	PF00037	4Fe-4S binding domain
AL504_RS12170	PF00175	Oxidoreductase NAD-binding domain 
AL504_RS12170	PF00970	Oxidoreductase FAD-binding domain
AL504_RS12180	PF04060	Putative Fe-S cluster
AL504_RS12185	PF10576	Iron-sulfur binding domain of endonuclease III
AL504_RS12185	PF00633	Helix-hairpin-helix motif
AL504_RS12185	PF00730	HhH-GPD superfamily base excision DNA repair protein
AL504_RS12190	PF12399	Branched-chain amino acid ATP-binding cassette transporter
AL504_RS12190	PF00005	ABC transporter
AL504_RS12195	PF00005	ABC transporter
AL504_RS12205	PF02653	Branched-chain amino acid transport system / permease component
AL504_RS12220	PF01063	Amino-transferase class IV
AL504_RS12225	PF05506	Domain of unknown function (DUF756)
AL504_RS12225	PF04185	Phosphoesterase family
AL504_RS12235	PF00005	ABC transporter
AL504_RS12240	PF00005	ABC transporter
AL504_RS12240	PF12399	Branched-chain amino acid ATP-binding cassette transporter
AL504_RS12255	PF02632	BioY family
AL504_RS12260	PF02632	BioY family
AL504_RS12265	PF02361	Cobalt transport protein
AL504_RS12270	PF00005	ABC transporter
AL504_RS12275	PF01641	SelR domain
AL504_RS12280	PF04279	Intracellular septation protein A 
AL504_RS12295	PF12826	Helix-hairpin-helix motif
AL504_RS12295	PF01653	NAD-dependent DNA ligase adenylation domain
AL504_RS12295	PF00533	BRCA1 C Terminus (BRCT) domain
AL504_RS12295	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
AL504_RS12295	PF03120	NAD-dependent DNA ligase OB-fold domain
AL504_RS12315	PF03167	Uracil DNA glycosylase superfamily
AL504_RS12320	PF00814	Glycoprotease family
AL504_RS12325	PF00486	Transcriptional regulatory protein, C terminal
AL504_RS12325	PF00072	Response regulator receiver domain
AL504_RS12330	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS12330	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS12330	PF00672	HAMP domain
AL504_RS12335	PF00578	AhpC/TSA family
AL504_RS12340	PF02627	Carboxymuconolactone decarboxylase family
AL504_RS12350	PF02542	YgbB family
AL504_RS12355	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
AL504_RS12360	PF02559	CarD-like/TRCF domain
AL504_RS12360	PF00271	Helicase conserved C-terminal domain
AL504_RS12360	PF03461	TRCF domain
AL504_RS12360	PF17757	UvrB interaction domain
AL504_RS12360	PF00270	DEAD/DEAH box helicase
AL504_RS12370	PF05860	haemagglutination activity domain
AL504_RS12380	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS12380	PF00593	TonB dependent receptor
AL504_RS12390	PF00361	Proton-conducting membrane transporter
AL504_RS12395	PF00361	Proton-conducting membrane transporter
AL504_RS12395	PF01059	NADH-ubiquinone oxidoreductase chain 4, amino terminus
AL504_RS12400	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
AL504_RS12400	PF00361	Proton-conducting membrane transporter
AL504_RS12405	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
AL504_RS12410	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
AL504_RS12415	PF12838	4Fe-4S dicluster domain
AL504_RS12420	PF00146	NADH dehydrogenase
AL504_RS12425	PF09326	NADH-ubiquinone oxidoreductase subunit G, C-terminal
AL504_RS12425	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AL504_RS12425	PF00384	Molybdopterin oxidoreductase
AL504_RS12430	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AL504_RS12430	PF10531	SLBB domain
AL504_RS12430	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
AL504_RS12440	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
AL504_RS12445	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
AL504_RS12450	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
AL504_RS12455	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
AL504_RS12460	PF13609	Gram-negative porin
AL504_RS12480	PF01569	PAP2 superfamily
AL504_RS12485	PF00149	Calcineurin-like phosphoesterase
AL504_RS12490	PF00781	Diacylglycerol kinase catalytic domain
AL504_RS12500	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL504_RS12510	PF00440	Bacterial regulatory proteins, tetR family
AL504_RS12510	PF08361	MAATS-type transcriptional repressor, C-terminal region
AL504_RS12520	PF00873	AcrB/AcrD/AcrF family
AL504_RS12525	PF02321	Outer membrane efflux protein
AL504_RS12535	PF02321	Outer membrane efflux protein
AL504_RS12540	PF00873	AcrB/AcrD/AcrF family
AL504_RS12545	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
AL504_RS12550	PF02028	BCCT, betaine/carnitine/choline family transporter
AL504_RS12560	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
AL504_RS12570	PF02321	Outer membrane efflux protein
AL504_RS12580	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS12585	PF01522	Polysaccharide deacetylase
AL504_RS12600	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL504_RS12605	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL504_RS12615	PF00005	ABC transporter
AL504_RS12615	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL504_RS12620	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS12620	PF12911	N-terminal TM domain of oligopeptide transport permease C
AL504_RS12625	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS12635	PF01037	Lrp/AsnC ligand binding domain
AL504_RS12640	PF05661	Protein of unknown function (DUF808)
AL504_RS12650	PF04405	Domain of Unknown function (DUF542)  
AL504_RS12650	PF01814	Hemerythrin HHE cation binding domain
AL504_RS12655	PF00158	Sigma-54 interaction domain
AL504_RS12655	PF02954	Bacterial regulatory protein, Fis family
AL504_RS12660	PF07660	Secretin and TonB N terminus short domain
AL504_RS12660	PF00593	TonB dependent receptor
AL504_RS12660	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS12670	PF08281	Sigma-70, region 4
AL504_RS12670	PF04542	Sigma-70 region 2 
AL504_RS12690	PF01381	Helix-turn-helix
AL504_RS12695	PF00106	short chain dehydrogenase
AL504_RS12700	PF03600	Citrate transporter
AL504_RS12705	PF00072	Response regulator receiver domain
AL504_RS12705	PF00486	Transcriptional regulatory protein, C terminal
AL504_RS12710	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS12710	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS12720	PF00072	Response regulator receiver domain
AL504_RS12720	PF00196	Bacterial regulatory proteins, luxR family
AL504_RS12725	PF08447	PAS fold
AL504_RS12725	PF13426	PAS domain
AL504_RS12725	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS12725	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS12725	PF00989	PAS fold
AL504_RS12725	PF13493	Domain of unknown function (DUF4118)
AL504_RS12735	PF00689	Cation transporting ATPase, C-terminus
AL504_RS12735	PF00690	Cation transporter/ATPase, N-terminus
AL504_RS12755	PF01740	STAS domain
AL504_RS12755	PF00916	Sulfate permease family
AL504_RS12760	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS12760	PF00593	TonB dependent receptor
AL504_RS12765	PF16220	Domain of unknown function (DUF4880)
AL504_RS12765	PF04773	FecR protein
AL504_RS12770	PF04542	Sigma-70 region 2 
AL504_RS12770	PF08281	Sigma-70, region 4
AL504_RS12775	PF00593	TonB dependent receptor
AL504_RS12775	PF07660	Secretin and TonB N terminus short domain
AL504_RS12775	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS12800	PF00005	ABC transporter
AL504_RS12830	PF13195	Protein of unknown function (DUF4011)
AL504_RS12830	PF13087	AAA domain
AL504_RS12830	PF13087	AAA domain
AL504_RS12830	PF13195	Protein of unknown function (DUF4011)
AL504_RS12830	PF13086	AAA domain
AL504_RS12830	PF13086	AAA domain
AL504_RS12835	PF12728	Helix-turn-helix domain
AL504_RS12835	PF12727	PBP superfamily domain
AL504_RS12845	PF01434	Peptidase family M41
AL504_RS12845	PF00004	ATPase family associated with various cellular activities (AAA)
AL504_RS12845	PF17862	AAA+ lid domain
AL504_RS12885	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL504_RS12885	PF00672	HAMP domain
AL504_RS12885	PF02203	Tar ligand binding domain homologue
AL504_RS12910	PF03840	Preprotein translocase SecG subunit
AL504_RS12915	PF00121	Triosephosphate isomerase
AL504_RS12920	PF00698	Acyl transferase domain
AL504_RS12920	PF00550	Phosphopantetheine attachment site
AL504_RS12920	PF08240	Alcohol dehydrogenase GroES-like domain
AL504_RS12920	PF14765	Polyketide synthase dehydratase
AL504_RS12920	PF16197	Ketoacyl-synthetase C-terminal extension
AL504_RS12920	PF00109	Beta-ketoacyl synthase, N-terminal domain
AL504_RS12920	PF08659	KR domain
AL504_RS12920	PF02801	Beta-ketoacyl synthase, C-terminal domain
AL504_RS12940	PF00682	HMGL-like
AL504_RS12945	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS12950	PF02515	CoA-transferase family III
AL504_RS12955	PF03466	LysR substrate binding domain
AL504_RS12955	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS12965	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS12965	PF03466	LysR substrate binding domain
AL504_RS12970	PF00795	Carbon-nitrogen hydrolase
AL504_RS12975	PF00756	Putative esterase
AL504_RS12990	PF13291	ACT domain
AL504_RS12990	PF00291	Pyridoxal-phosphate dependent enzyme
AL504_RS13000	PF00013	KH domain
AL504_RS13000	PF00575	S1 RNA binding domain
AL504_RS13000	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
AL504_RS13000	PF01138	3' exoribonuclease family, domain 1
AL504_RS13000	PF03725	3' exoribonuclease family, domain 2
AL504_RS13005	PF00312	Ribosomal protein S15
AL504_RS13015	PF01066	CDP-alcohol phosphatidyltransferase
AL504_RS13020	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
AL504_RS13020	PF07991	Acetohydroxy acid isomeroreductase, NADPH-binding domain
AL504_RS13025	PF10369	Small subunit of acetolactate synthase
AL504_RS13030	PF00205	Thiamine pyrophosphate enzyme, central domain
AL504_RS13030	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AL504_RS13030	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AL504_RS13035	PF12805	FUSC-like inner membrane protein yccS
AL504_RS13045	PF00106	short chain dehydrogenase
AL504_RS13050	PF02254	TrkA-N domain
AL504_RS13050	PF00999	Sodium/hydrogen exchanger family
AL504_RS13065	PF00701	Dihydrodipicolinate synthetase family
AL504_RS13070	PF13378	Enolase C-terminal domain-like
AL504_RS13070	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
AL504_RS13075	PF03466	LysR substrate binding domain
AL504_RS13075	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS13080	PF01979	Amidohydrolase family
AL504_RS13100	PF02403	Seryl-tRNA synthetase N-terminal domain
AL504_RS13100	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AL504_RS13105	PF12002	MgsA AAA+ ATPase C terminal
AL504_RS13105	PF16193	AAA C-terminal domain
AL504_RS13105	PF00004	ATPase family associated with various cellular activities (AAA)
AL504_RS13110	PF00795	Carbon-nitrogen hydrolase
AL504_RS13120	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL504_RS13125	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS13130	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS13130	PF12911	N-terminal TM domain of oligopeptide transport permease C
AL504_RS13135	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL504_RS13135	PF00005	ABC transporter
AL504_RS13140	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL504_RS13140	PF00005	ABC transporter
AL504_RS13145	PF00571	CBS domain
AL504_RS13145	PF01380	SIS domain
AL504_RS13150	PF07969	Amidohydrolase family
AL504_RS13155	PF01042	Endoribonuclease L-PSP
AL504_RS13160	PF03548	Outer membrane lipoprotein carrier protein LolA
AL504_RS13165	PF13491	4TM region of DNA translocase FtsK/SpoIIIE
AL504_RS13165	PF01580	FtsK/SpoIIIE family
AL504_RS13165	PF09397	Ftsk gamma domain
AL504_RS13165	PF17854	FtsK alpha domain
AL504_RS13170	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL504_RS13175	PF01713	Smr domain
AL504_RS13175	PF00488	MutS domain V
AL504_RS13180	PF00893	Small Multidrug Resistance protein
AL504_RS13185	PF00474	Sodium:solute symporter family
AL504_RS13200	PF03814	Potassium-transporting ATPase A subunit
AL504_RS13210	PF02669	K+-transporting ATPase, c chain
AL504_RS13215	PF02702	Osmosensitive K+ channel His kinase sensor domain
AL504_RS13215	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS13215	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS13215	PF13492	GAF domain
AL504_RS13215	PF13493	Domain of unknown function (DUF4118)
AL504_RS13220	PF00486	Transcriptional regulatory protein, C terminal
AL504_RS13220	PF00072	Response regulator receiver domain
AL504_RS13235	PF00701	Dihydrodipicolinate synthetase family
AL504_RS13240	PF02203	Tar ligand binding domain homologue
AL504_RS13240	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL504_RS13240	PF00672	HAMP domain
AL504_RS13255	PF00180	Isocitrate/isopropylmalate dehydrogenase
AL504_RS13270	PF00034	Cytochrome c
AL504_RS13275	PF01434	Peptidase family M41
AL504_RS13275	PF17862	AAA+ lid domain
AL504_RS13275	PF00004	ATPase family associated with various cellular activities (AAA)
AL504_RS13295	PF13302	Acetyltransferase (GNAT) domain
AL504_RS13300	PF00675	Insulinase (Peptidase family M16)
AL504_RS13300	PF05193	Peptidase M16 inactive domain
AL504_RS13310	PF00684	DnaJ central domain
AL504_RS13310	PF00226	DnaJ domain
AL504_RS13310	PF01556	DnaJ C terminal domain
AL504_RS13315	PF00012	Hsp70 protein
AL504_RS13325	PF01025	GrpE
AL504_RS13335	PF00762	Ferrochelatase
AL504_RS13340	PF01628	HrcA protein C terminal domain
AL504_RS13340	PF03444	Winged helix-turn-helix transcription repressor, HrcA DNA-binding
AL504_RS13345	PF01513	ATP-NAD kinase
AL504_RS13350	PF02463	RecF/RecN/SMC N terminal domain
AL504_RS13355	PF01475	Ferric uptake regulator family
AL504_RS13360	PF04355	SmpA / OmlA family
AL504_RS13365	PF01113	Dihydrodipicolinate reductase, N-terminus
AL504_RS13365	PF05173	Dihydrodipicolinate reductase, C-terminus
AL504_RS13370	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
AL504_RS13370	PF01565	FAD binding domain 
AL504_RS13385	PF02525	Flavodoxin-like fold
AL504_RS13395	PF00155	Aminotransferase class I and II
AL504_RS13395	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS13440	PF03466	LysR substrate binding domain
AL504_RS13440	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS13450	PF03588	Leucyl/phenylalanyl-tRNA protein transferase
AL504_RS13455	PF04377	Arginine-tRNA-protein transferase, C terminus
AL504_RS13455	PF04376	Arginine-tRNA-protein transferase, N terminus
AL504_RS13460	PF01180	Dihydroorotate dehydrogenase
AL504_RS13470	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS13475	PF09339	IclR helix-turn-helix domain
AL504_RS13475	PF01614	Bacterial transcriptional regulator
AL504_RS13480	PF02464	Competence-damaged protein
AL504_RS13480	PF18146	Damage-inducible protein CinA KH domain
AL504_RS13480	PF00994	Probable molybdopterin binding domain
AL504_RS13495	PF00270	DEAD/DEAH box helicase
AL504_RS13495	PF00271	Helicase conserved C-terminal domain
AL504_RS13505	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS13505	PF00593	TonB dependent receptor
AL504_RS13510	PF07690	Major Facilitator Superfamily
AL504_RS13515	PF01494	FAD binding domain
AL504_RS13530	PF01063	Amino-transferase class IV
AL504_RS13550	PF01435	Peptidase family M48
AL504_RS13550	PF13181	Tetratricopeptide repeat
AL504_RS13555	PF00483	Nucleotidyl transferase
AL504_RS13565	PF13609	Gram-negative porin
AL504_RS13585	PF00557	Metallopeptidase family M24
AL504_RS13585	PF05195	Aminopeptidase P, N-terminal domain
AL504_RS13595	PF01494	FAD binding domain
AL504_RS13600	PF01207	Dihydrouridine synthase (Dus)
AL504_RS13605	PF02954	Bacterial regulatory protein, Fis family
AL504_RS13610	PF01808	AICARFT/IMPCHase bienzyme
AL504_RS13610	PF02142	MGS-like domain
AL504_RS13615	PF02075	Crossover junction endodeoxyribonuclease RuvC
AL504_RS13620	PF07499	RuvA, C-terminal domain
AL504_RS13620	PF01330	RuvA N terminal domain
AL504_RS13625	PF08338	Domain of unknown function (DUF1731)
AL504_RS13625	PF01370	NAD dependent epimerase/dehydratase family
AL504_RS13630	PF00291	Pyridoxal-phosphate dependent enzyme
AL504_RS13635	PF05491	RuvB C-terminal winged helix domain
AL504_RS13635	PF05496	Holliday junction DNA helicase RuvB P-loop domain
AL504_RS13635	PF17864	RuvB AAA lid domain
AL504_RS13640	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
AL504_RS13640	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS13655	PF16124	RecQ zinc-binding
AL504_RS13655	PF00270	DEAD/DEAH box helicase
AL504_RS13655	PF09382	RQC domain
AL504_RS13655	PF00271	Helicase conserved C-terminal domain
AL504_RS13655	PF00570	HRDC domain
AL504_RS13670	PF00749	tRNA synthetases class I (E and Q), catalytic domain
AL504_RS13670	PF03950	tRNA synthetases class I (E and Q), anti-codon binding domain
AL504_RS13675	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS13680	PF02515	CoA-transferase family III
AL504_RS13685	PF00682	HMGL-like
AL504_RS13690	PF01614	Bacterial transcriptional regulator
AL504_RS13690	PF09339	IclR helix-turn-helix domain
AL504_RS13700	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
AL504_RS13705	PF03776	Septum formation topological specificity factor MinE
AL504_RS13720	PF00005	ABC transporter
AL504_RS13720	PF12848	ABC transporter
AL504_RS13725	PF02522	Aminoglycoside 3-N-acetyltransferase
AL504_RS13745	PF00005	ABC transporter
AL504_RS13745	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL504_RS13750	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL504_RS13750	PF00005	ABC transporter
AL504_RS13755	PF12911	N-terminal TM domain of oligopeptide transport permease C
AL504_RS13755	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS13760	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS13765	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL504_RS13785	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL504_RS13790	PF00848	Ring hydroxylating alpha subunit (catalytic domain)
AL504_RS13790	PF00355	Rieske [2Fe-2S] domain
AL504_RS13795	PF00866	Ring hydroxylating beta subunit
AL504_RS13800	PF00501	AMP-binding enzyme
AL504_RS13800	PF13193	AMP-binding enzyme C-terminal domain
AL504_RS13815	PF04199	Putative cyclase
AL504_RS13835	PF12399	Branched-chain amino acid ATP-binding cassette transporter
AL504_RS13835	PF00005	ABC transporter
AL504_RS13840	PF00005	ABC transporter
AL504_RS13845	PF00535	Glycosyl transferase family 2
AL504_RS13850	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS13850	PF03466	LysR substrate binding domain
AL504_RS13860	PF00294	pfkB family carbohydrate kinase
AL504_RS13865	PF01081	KDPG and KHG aldolase
AL504_RS13875	PF17760	UvrA interaction domain
AL504_RS13875	PF17755	UvrA DNA-binding domain
AL504_RS13875	PF00005	ABC transporter
AL504_RS13890	PF04542	Sigma-70 region 2 
AL504_RS13890	PF08281	Sigma-70, region 4
AL504_RS13895	PF04773	FecR protein
AL504_RS13895	PF16220	Domain of unknown function (DUF4880)
AL504_RS13900	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS13900	PF00593	TonB dependent receptor
AL504_RS13905	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS13905	PF03466	LysR substrate binding domain
AL504_RS13910	PF00848	Ring hydroxylating alpha subunit (catalytic domain)
AL504_RS13910	PF00355	Rieske [2Fe-2S] domain
AL504_RS13915	PF13577	SnoaL-like domain
AL504_RS13920	PF00355	Rieske [2Fe-2S] domain
AL504_RS13925	PF00899	ThiF family
AL504_RS13930	PF02321	Outer membrane efflux protein
AL504_RS13935	PF00005	ABC transporter
AL504_RS13935	PF12704	MacB-like periplasmic core domain
AL504_RS13935	PF02687	FtsX-like permease family
AL504_RS13940	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
AL504_RS13945	PF07690	Major Facilitator Superfamily
AL504_RS13955	PF01243	Pyridoxamine 5'-phosphate oxidase
AL504_RS13955	PF10590	Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
AL504_RS13960	PF01613	Flavin reductase like domain
AL504_RS13965	PF01266	FAD dependent oxidoreductase
AL504_RS13970	PF00551	Formyl transferase
AL504_RS13975	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS13975	PF03466	LysR substrate binding domain
AL504_RS13980	PF00465	Iron-containing alcohol dehydrogenase 
AL504_RS13985	PF02668	Taurine catabolism dioxygenase TauD, TfdA family
AL504_RS13990	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS13995	PF01070	FMN-dependent dehydrogenase
AL504_RS14005	PF01557	Fumarylacetoacetate (FAA) hydrolase family
AL504_RS14010	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS14010	PF03466	LysR substrate binding domain
AL504_RS14015	PF02770	Acyl-CoA dehydrogenase, middle domain
AL504_RS14015	PF18158	Adaptive response protein AidB N-terminal domain
AL504_RS14015	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL504_RS14020	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS14025	PF02515	CoA-transferase family III
AL504_RS14030	PF13520	Amino acid permease
AL504_RS14040	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS14040	PF03466	LysR substrate binding domain
AL504_RS14045	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS14055	PF10415	Fumarase C C-terminus
AL504_RS14055	PF00206	Lyase
AL504_RS14060	PF01520	N-acetylmuramoyl-L-alanine amidase
AL504_RS14060	PF11741	AMIN domain
AL504_RS14065	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS14065	PF00593	TonB dependent receptor
AL504_RS14070	PF09335	SNARE associated Golgi protein
AL504_RS14090	PF02769	AIR synthase related protein, C-terminal domain
AL504_RS14090	PF00586	AIR synthase related protein, N-terminal domain
AL504_RS14095	PF00308	Bacterial dnaA  protein
AL504_RS14105	PF01743	Poly A polymerase head domain
AL504_RS14105	PF12627	Probable RNA and SrmB- binding site of polymerase A
AL504_RS14105	PF12626	Polymerase A arginine-rich C-terminus
AL504_RS14110	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
AL504_RS14115	PF00294	pfkB family carbohydrate kinase
AL504_RS14120	PF03328	HpcH/HpaI aldolase/citrate lyase family
AL504_RS14135	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS14135	PF03466	LysR substrate binding domain
AL504_RS14140	PF00378	Enoyl-CoA hydratase/isomerase
AL504_RS14145	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL504_RS14145	PF02770	Acyl-CoA dehydrogenase, middle domain
AL504_RS14145	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL504_RS14150	PF02770	Acyl-CoA dehydrogenase, middle domain
AL504_RS14150	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL504_RS14150	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL504_RS14160	PF02803	Thiolase, C-terminal domain
AL504_RS14160	PF00108	Thiolase, N-terminal domain
AL504_RS14165	PF00501	AMP-binding enzyme
AL504_RS14165	PF13193	AMP-binding enzyme C-terminal domain
AL504_RS14170	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS14175	PF03060	Nitronate monooxygenase
AL504_RS14180	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS14190	PF00106	short chain dehydrogenase
AL504_RS14195	PF01575	MaoC like domain
AL504_RS14200	PF02515	CoA-transferase family III
AL504_RS14205	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL504_RS14205	PF13426	PAS domain
AL504_RS14205	PF08447	PAS fold
AL504_RS14215	PF00378	Enoyl-CoA hydratase/isomerase
AL504_RS14220	PF02091	Glycyl-tRNA synthetase alpha subunit
AL504_RS14225	PF02092	Glycyl-tRNA synthetase beta subunit
AL504_RS14225	PF05746	DALR anticodon binding domain
AL504_RS14235	PF01553	Acyltransferase
AL504_RS14245	PF00266	Aminotransferase class-V
AL504_RS14250	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL504_RS14255	PF01327	Polypeptide deformylase
AL504_RS14265	PF07670	Nucleoside recognition
AL504_RS14270	PF02887	Pyruvate kinase, alpha/beta domain
AL504_RS14270	PF00224	Pyruvate kinase, barrel domain
AL504_RS14275	PF02595	Glycerate kinase family
AL504_RS14280	PF00398	Ribosomal RNA adenine dimethylase
AL504_RS14285	PF09312	SurA N-terminal domain
AL504_RS14285	PF00639	PPIC-type PPIASE domain
AL504_RS14290	PF04453	LPS transport system D
AL504_RS14295	PF01636	Phosphotransferase enzyme family
AL504_RS14300	PF00483	Nucleotidyl transferase
AL504_RS14310	PF01494	FAD binding domain
AL504_RS14325	PF01329	Pterin 4 alpha carbinolamine dehydratase
AL504_RS14330	PF00691	OmpA family
AL504_RS14330	PF04972	BON domain
AL504_RS14340	PF02525	Flavodoxin-like fold
AL504_RS14345	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS14345	PF07660	Secretin and TonB N terminus short domain
AL504_RS14345	PF00593	TonB dependent receptor
AL504_RS14355	PF08281	Sigma-70, region 4
AL504_RS14355	PF04542	Sigma-70 region 2 
AL504_RS14375	PF00990	Diguanylate cyclase, GGDEF domain
AL504_RS14380	PF05170	AsmA family
AL504_RS14385	PF00884	Sulfatase
AL504_RS14390	PF03352	Methyladenine glycosylase
AL504_RS14395	PF03692	Putative zinc- or iron-chelating domain
AL504_RS14410	PF01475	Ferric uptake regulator family
AL504_RS14420	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS14420	PF03466	LysR substrate binding domain
AL504_RS14425	PF02203	Tar ligand binding domain homologue
AL504_RS14425	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL504_RS14425	PF00672	HAMP domain
AL504_RS14455	PF00529	HlyD membrane-fusion protein of T1SS
AL504_RS14460	PF00005	ABC transporter
AL504_RS14460	PF00664	ABC transporter transmembrane region
AL504_RS14475	PF03180	NLPA lipoprotein
AL504_RS14480	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS14485	PF09383	NIL domain
AL504_RS14485	PF00005	ABC transporter
AL504_RS14495	PF05430	S-adenosyl-L-methionine-dependent methyltransferase
AL504_RS14495	PF01266	FAD dependent oxidoreductase
AL504_RS14500	PF00459	Inositol monophosphatase family
AL504_RS14505	PF00501	AMP-binding enzyme
AL504_RS14505	PF13193	AMP-binding enzyme C-terminal domain
AL504_RS14510	PF01546	Peptidase family M20/M25/M40
AL504_RS14510	PF07687	Peptidase dimerisation domain
AL504_RS14525	PF03601	Conserved hypothetical protein 698
AL504_RS14530	PF03061	Thioesterase superfamily
AL504_RS14535	PF03448	MgtE intracellular N domain
AL504_RS14535	PF00571	CBS domain
AL504_RS14535	PF01769	Divalent cation transporter
AL504_RS14540	PF07017	Antimicrobial peptide resistance and lipid A acylation protein PagP
AL504_RS14550	PF01037	Lrp/AsnC ligand binding domain
AL504_RS14555	PF00106	short chain dehydrogenase
AL504_RS14565	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AL504_RS14565	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AL504_RS14565	PF00205	Thiamine pyrophosphate enzyme, central domain
AL504_RS14570	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS14575	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS14575	PF07729	FCD domain
AL504_RS14585	PF07517	SecA DEAD-like domain
AL504_RS14585	PF02810	SEC-C motif
AL504_RS14585	PF07516	SecA Wing and Scaffold domain
AL504_RS14585	PF01043	SecA preprotein cross-linking domain
AL504_RS14590	PF01551	Peptidase family M23
AL504_RS14590	PF08525	Opacity-associated protein A N-terminal motif
AL504_RS14590	PF01476	LysM domain
AL504_RS14600	PF03331	UDP-3-O-acyl N-acetylglycosamine deacetylase
AL504_RS14605	PF00091	Tubulin/FtsZ family, GTPase domain
AL504_RS14605	PF12327	FtsZ family, C-terminal domain
AL504_RS14610	PF02491	SHS2 domain inserted in FTSA
AL504_RS14615	PF08478	POTRA domain, FtsQ-type
AL504_RS14615	PF03799	Cell division protein FtsQ
AL504_RS14620	PF07478	D-ala D-ala ligase C-terminus
AL504_RS14620	PF01820	D-ala D-ala ligase N-terminus
AL504_RS14625	PF01225	Mur ligase family, catalytic domain
AL504_RS14625	PF02875	Mur ligase family, glutamate ligase domain
AL504_RS14625	PF08245	Mur ligase middle domain
AL504_RS14630	PF04101	Glycosyltransferase family 28 C-terminal domain
AL504_RS14630	PF03033	Glycosyltransferase family 28 N-terminal domain
AL504_RS14635	PF01098	Cell cycle protein
AL504_RS14640	PF08245	Mur ligase middle domain
AL504_RS14640	PF02875	Mur ligase family, glutamate ligase domain
AL504_RS14645	PF00953	Glycosyl transferase family 4
AL504_RS14650	PF02875	Mur ligase family, glutamate ligase domain
AL504_RS14650	PF08245	Mur ligase middle domain
AL504_RS14655	PF00905	Penicillin binding protein transpeptidase domain
AL504_RS14655	PF03717	Penicillin-binding Protein dimerisation domain
AL504_RS14660	PF04999	Cell division protein FtsL
AL504_RS14665	PF01795	MraW methylase family
AL504_RS14670	PF02381	MraZ protein, putative antitoxin-like
AL504_RS14680	PF00005	ABC transporter
AL504_RS14680	PF16326	ABC transporter C-terminal domain
AL504_RS14680	PF12848	ABC transporter
AL504_RS14685	PF01979	Amidohydrolase family
AL504_RS14690	PF07687	Peptidase dimerisation domain
AL504_RS14690	PF01546	Peptidase family M20/M25/M40
AL504_RS14700	PF03466	LysR substrate binding domain
AL504_RS14700	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS14740	PF01037	Lrp/AsnC ligand binding domain
AL504_RS14745	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL504_RS14750	PF01625	Peptide methionine sulfoxide reductase
AL504_RS14755	PF00034	Cytochrome c
AL504_RS14760	PF00920	Dehydratase family
AL504_RS14765	PF01790	Prolipoprotein diacylglyceryl transferase
AL504_RS14795	PF01970	Tripartite tricarboxylate transporter TctA family
AL504_RS14805	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AL504_RS14805	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
AL504_RS14810	PF02525	Flavodoxin-like fold
AL504_RS14815	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS14815	PF03466	LysR substrate binding domain
AL504_RS14820	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL504_RS14825	PF01970	Tripartite tricarboxylate transporter TctA family
AL504_RS14835	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS14835	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS14840	PF00486	Transcriptional regulatory protein, C terminal
AL504_RS14840	PF00072	Response regulator receiver domain
AL504_RS14845	PF00293	NUDIX domain
AL504_RS14850	PF04073	Aminoacyl-tRNA editing domain
AL504_RS14850	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AL504_RS14850	PF03129	Anticodon binding domain
AL504_RS14855	PF03061	Thioesterase superfamily
AL504_RS14860	PF01618	MotA/TolQ/ExbB proton channel family
AL504_RS14865	PF02472	Biopolymer transport protein ExbD/TolR
AL504_RS14875	PF07676	WD40-like Beta Propeller Repeat
AL504_RS14875	PF04052	TolB amino-terminal domain
AL504_RS14880	PF00691	OmpA family
AL504_RS14890	PF01032	FecCD transport family
AL504_RS14895	PF00005	ABC transporter
AL504_RS14910	PF01037	Lrp/AsnC ligand binding domain
AL504_RS14920	PF03144	Elongation factor Tu domain 2
AL504_RS14920	PF03764	Elongation factor G, domain IV
AL504_RS14920	PF00009	Elongation factor Tu GTP binding domain
AL504_RS14920	PF14492	Elongation Factor G, domain II
AL504_RS14920	PF00679	Elongation factor G C-terminus
AL504_RS14925	PF00582	Universal stress protein family
AL504_RS14940	PF00892	EamA-like transporter family
AL504_RS14945	PF01810	LysE type translocator
AL504_RS14950	PF04172	LrgB-like family 
AL504_RS14955	PF03788	LrgA family
AL504_RS14960	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS14960	PF03466	LysR substrate binding domain
AL504_RS14970	PF00701	Dihydrodipicolinate synthetase family
AL504_RS14975	PF00005	ABC transporter
AL504_RS14975	PF12399	Branched-chain amino acid ATP-binding cassette transporter
AL504_RS14980	PF00005	ABC transporter
AL504_RS14990	PF02653	Branched-chain amino acid transport system / permease component
AL504_RS15010	PF03466	LysR substrate binding domain
AL504_RS15010	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS15025	PF02366	Dolichyl-phosphate-mannose-protein mannosyltransferase  
AL504_RS15030	PF00535	Glycosyl transferase family 2
AL504_RS15040	PF03616	Sodium/glutamate symporter
AL504_RS15055	PF02639	Uncharacterized BCR, YaiI/YqxD family COG1671
AL504_RS15065	PF00929	Exonuclease
AL504_RS15070	PF00873	AcrB/AcrD/AcrF family
AL504_RS15080	PF00075	RNase H
AL504_RS15085	PF08241	Methyltransferase domain
AL504_RS15090	PF16123	Hydroxyacylglutathione hydrolase C-terminus
AL504_RS15090	PF00753	Metallo-beta-lactamase superfamily
AL504_RS15095	PF01464	Transglycosylase SLT domain
AL504_RS15095	PF01476	LysM domain
AL504_RS15115	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS15120	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
AL504_RS15120	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
AL504_RS15135	PF01740	STAS domain
AL504_RS15140	PF13581	Histidine kinase-like ATPase domain
AL504_RS15145	PF01168	Alanine racemase, N-terminal domain
AL504_RS15145	PF00842	Alanine racemase, C-terminal domain
AL504_RS15155	PF07228	Stage II sporulation protein E (SpoIIE)
AL504_RS15155	PF00672	HAMP domain
AL504_RS15170	PF08281	Sigma-70, region 4
AL504_RS15170	PF04542	Sigma-70 region 2 
AL504_RS15175	PF03958	Bacterial type II/III secretion system short domain
AL504_RS15175	PF00263	Bacterial type II and III secretion system protein
AL504_RS15185	PF01312	FlhB HrpN YscU SpaS Family
AL504_RS15190	PF01311	Bacterial export proteins, family 1
AL504_RS15195	PF01313	Bacterial export proteins, family 3
AL504_RS15200	PF00813	FliP family
AL504_RS15205	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
AL504_RS15220	PF02874	ATP synthase alpha/beta family, beta-barrel domain
AL504_RS15220	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AL504_RS15220	PF18269	T3SS EscN ATPase C-terminal domain
AL504_RS15225	PF02108	Flagellar assembly protein FliH
AL504_RS15235	PF01514	Secretory protein of YscJ/FliF family
AL504_RS15305	PF00771	FHIPEP family
AL504_RS15335	PF03466	LysR substrate binding domain
AL504_RS15335	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS15340	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS15350	PF01323	DSBA-like thioredoxin domain
AL504_RS15360	PF14552	Tautomerase enzyme
AL504_RS15375	PF04293	SpoVR like protein
AL504_RS15380	PF04285	Protein of unknown function (DUF444)
AL504_RS15385	PF08298	PrkA AAA domain
AL504_RS15385	PF06798	PrkA serine protein kinase C-terminal domain
AL504_RS15400	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
AL504_RS15400	PF01872	RibD C-terminal domain
AL504_RS15405	PF00857	Isochorismatase family
AL504_RS15415	PF03477	ATP cone domain
AL504_RS15420	PF00464	Serine hydroxymethyltransferase
AL504_RS15425	PF01810	LysE type translocator
AL504_RS15435	PF01479	S4 domain
AL504_RS15435	PF00579	tRNA synthetases class I (W and Y)
AL504_RS15445	PF03702	Anhydro-N-acetylmuramic acid kinase
AL504_RS15450	PF01521	Iron-sulphur cluster biosynthesis
AL504_RS15460	PF02774	Semialdehyde dehydrogenase, dimerisation domain
AL504_RS15460	PF01118	Semialdehyde dehydrogenase, NAD binding domain
AL504_RS15465	PF00380	Ribosomal protein S9/S16
AL504_RS15470	PF00572	Ribosomal protein L13
AL504_RS15475	PF00005	ABC transporter
AL504_RS15480	PF00005	ABC transporter
AL504_RS15480	PF12399	Branched-chain amino acid ATP-binding cassette transporter
AL504_RS15485	PF02653	Branched-chain amino acid transport system / permease component
AL504_RS15485	PF11862	Domain of unknown function (DUF3382)
AL504_RS15490	PF02653	Branched-chain amino acid transport system / permease component
AL504_RS15495	PF13458	Periplasmic binding protein
AL504_RS15505	PF01523	Putative modulator of DNA gyrase
AL504_RS15510	PF04751	Protein of unknown function (DUF615)
AL504_RS15525	PF00005	ABC transporter
AL504_RS15530	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS15535	PF00857	Isochorismatase family
AL504_RS15540	PF13607	Succinyl-CoA ligase like flavodoxin domain
AL504_RS15540	PF13380	CoA binding domain
AL504_RS15540	PF00583	Acetyltransferase (GNAT) family
AL504_RS15545	PF00749	tRNA synthetases class I (E and Q), catalytic domain
AL504_RS15550	PF07690	Major Facilitator Superfamily
AL504_RS15560	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS15560	PF03466	LysR substrate binding domain
AL504_RS15575	PF01037	Lrp/AsnC ligand binding domain
AL504_RS15585	PF02867	Ribonucleotide reductase, barrel domain
AL504_RS15585	PF03477	ATP cone domain
AL504_RS15585	PF00317	Ribonucleotide reductase, all-alpha domain
AL504_RS15590	PF00268	Ribonucleotide reductase, small chain
AL504_RS15605	PF13193	AMP-binding enzyme C-terminal domain
AL504_RS15605	PF00501	AMP-binding enzyme
AL504_RS15610	PF03062	MBOAT, membrane-bound O-acyltransferase family
AL504_RS15635	PF00294	pfkB family carbohydrate kinase
AL504_RS15635	PF01467	Cytidylyltransferase-like
AL504_RS15650	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AL504_RS15650	PF02785	Biotin carboxylase C-terminal domain
AL504_RS15650	PF00289	Biotin carboxylase, N-terminal domain
AL504_RS15660	PF01220	Dehydroquinase class II
AL504_RS15665	PF08534	Redoxin
AL504_RS15670	PF01225	Mur ligase family, catalytic domain
AL504_RS15670	PF02875	Mur ligase family, glutamate ligase domain
AL504_RS15670	PF08245	Mur ligase middle domain
AL504_RS15675	PF05728	Uncharacterised protein family (UPF0227)
AL504_RS15680	PF00773	RNB domain
AL504_RS15685	PF00072	Response regulator receiver domain
AL504_RS15685	PF00486	Transcriptional regulatory protein, C terminal
AL504_RS15690	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS15690	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS15700	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS15705	PF00005	ABC transporter
AL504_RS15705	PF08402	TOBE domain
AL504_RS15730	PF00149	Calcineurin-like phosphoesterase
AL504_RS15740	PF00005	ABC transporter
AL504_RS15745	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS15750	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS15755	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL504_RS15760	PF00155	Aminotransferase class I and II
AL504_RS15765	PF03737	Aldolase/RraA
AL504_RS15775	PF01553	Acyltransferase
AL504_RS15780	PF01979	Amidohydrolase family
AL504_RS15785	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
AL504_RS15785	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
AL504_RS15790	PF03652	Holliday junction resolvase
AL504_RS15795	PF02622	Uncharacterized ACR, COG1678
AL504_RS15800	PF00301	Rubredoxin
AL504_RS15805	PF08543	Phosphomethylpyrimidine kinase
AL504_RS15810	PF02581	Thiamine monophosphate synthase
AL504_RS15815	PF00202	Aminotransferase class-III
AL504_RS15820	PF01464	Transglycosylase SLT domain
AL504_RS15835	PF00857	Isochorismatase family
AL504_RS15840	PF00866	Ring hydroxylating beta subunit
AL504_RS15845	PF00355	Rieske [2Fe-2S] domain
AL504_RS15845	PF00848	Ring hydroxylating alpha subunit (catalytic domain)
AL504_RS15850	PF01738	Dienelactone hydrolase family
AL504_RS15875	PF13193	AMP-binding enzyme C-terminal domain
AL504_RS15875	PF00501	AMP-binding enzyme
AL504_RS15880	PF02770	Acyl-CoA dehydrogenase, middle domain
AL504_RS15880	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL504_RS15880	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL504_RS15885	PF00378	Enoyl-CoA hydratase/isomerase
AL504_RS15895	PF01494	FAD binding domain
AL504_RS15900	PF03707	Bacterial signalling protein N terminal repeat
AL504_RS15900	PF00990	Diguanylate cyclase, GGDEF domain
AL504_RS15900	PF00563	EAL domain
AL504_RS15905	PF00990	Diguanylate cyclase, GGDEF domain
AL504_RS15910	PF09345	Domain of unknown function (DUF1987)
AL504_RS15925	PF00005	ABC transporter
AL504_RS15930	PF12399	Branched-chain amino acid ATP-binding cassette transporter
AL504_RS15930	PF00005	ABC transporter
AL504_RS15935	PF11862	Domain of unknown function (DUF3382)
AL504_RS15935	PF02653	Branched-chain amino acid transport system / permease component
AL504_RS15940	PF02653	Branched-chain amino acid transport system / permease component
AL504_RS15960	PF01960	ArgJ family
AL504_RS15970	PF00293	NUDIX domain
AL504_RS15980	PF07969	Amidohydrolase family
AL504_RS15985	PF01266	FAD dependent oxidoreductase
AL504_RS15990	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS15995	PF02321	Outer membrane efflux protein
AL504_RS16000	PF00873	AcrB/AcrD/AcrF family
AL504_RS16005	PF00873	AcrB/AcrD/AcrF family
AL504_RS16010	PF13533	Biotin-lipoyl like
AL504_RS16015	PF07072	Cell division protein
AL504_RS16020	PF01121	Dephospho-CoA kinase
AL504_RS16025	PF06750	Bacterial Peptidase A24 N-terminal domain
AL504_RS16025	PF01478	Type IV leader peptidase family
AL504_RS16035	PF00072	Response regulator receiver domain
AL504_RS16035	PF00196	Bacterial regulatory proteins, luxR family
AL504_RS16040	PF02569	Pantoate-beta-alanine ligase
AL504_RS16045	PF02616	Segregation and condensation protein ScpA
AL504_RS16055	PF07690	Major Facilitator Superfamily
AL504_RS16060	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
AL504_RS16060	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
AL504_RS16070	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS16070	PF03466	LysR substrate binding domain
AL504_RS16075	PF07883	Cupin domain
AL504_RS16080	PF01557	Fumarylacetoacetate (FAA) hydrolase family
AL504_RS16085	PF13417	Glutathione S-transferase, N-terminal domain
AL504_RS16090	PF00800	Prephenate dehydratase
AL504_RS16090	PF01817	Chorismate mutase type II
AL504_RS16090	PF01842	ACT domain
AL504_RS16095	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS16105	PF01494	FAD binding domain
AL504_RS16125	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS16130	PF00005	ABC transporter
AL504_RS16135	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS16140	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS16145	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL504_RS16150	PF00005	ABC transporter
AL504_RS16155	PF18075	FtsX extracellular domain
AL504_RS16160	PF03975	CheD chemotactic sensory transduction
AL504_RS16165	PF01965	DJ-1/PfpI family
AL504_RS16165	PF12833	Helix-turn-helix domain
AL504_RS16200	PF00633	Helix-hairpin-helix motif
AL504_RS16200	PF10576	Iron-sulfur binding domain of endonuclease III
AL504_RS16200	PF00730	HhH-GPD superfamily base excision DNA repair protein
AL504_RS16200	PF14815	NUDIX domain
AL504_RS16220	PF13193	AMP-binding enzyme C-terminal domain
AL504_RS16220	PF00501	AMP-binding enzyme
AL504_RS16235	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS16245	PF01425	Amidase
AL504_RS16250	PF01232	Mannitol dehydrogenase Rossmann domain
AL504_RS16250	PF08125	Mannitol dehydrogenase C-terminal domain
AL504_RS16255	PF13378	Enolase C-terminal domain-like
AL504_RS16255	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
AL504_RS16260	PF00005	ABC transporter
AL504_RS16265	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS16270	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS16275	PF08240	Alcohol dehydrogenase GroES-like domain
AL504_RS16275	PF00107	Zinc-binding dehydrogenase
AL504_RS16290	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS16290	PF07729	FCD domain
AL504_RS16295	PF02574	Homocysteine S-methyltransferase
AL504_RS16295	PF00809	Pterin binding enzyme
AL504_RS16295	PF02310	B12 binding domain
AL504_RS16295	PF02965	Vitamin B12 dependent methionine synthase, activation domain
AL504_RS16295	PF02607	B12 binding domain
AL504_RS16300	PF00593	TonB dependent receptor
AL504_RS16300	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS16305	PF01497	Periplasmic binding protein
AL504_RS16310	PF05690	Thiazole biosynthesis protein ThiG
AL504_RS16315	PF08543	Phosphomethylpyrimidine kinase
AL504_RS16325	PF02321	Outer membrane efflux protein
AL504_RS16330	PF01467	Cytidylyltransferase-like
AL504_RS16340	PF03109	ABC1 family
AL504_RS16355	PF01209	ubiE/COQ5 methyltransferase family
AL504_RS16360	PF00072	Response regulator receiver domain
AL504_RS16360	PF00486	Transcriptional regulatory protein, C terminal
AL504_RS16365	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS16365	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS16365	PF11808	Phosphate regulon sensor protein PhoR
AL504_RS16365	PF00989	PAS fold
AL504_RS16370	PF00486	Transcriptional regulatory protein, C terminal
AL504_RS16370	PF00072	Response regulator receiver domain
AL504_RS16375	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS16375	PF00672	HAMP domain
AL504_RS16375	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS16385	PF00394	Multicopper oxidase
AL504_RS16385	PF07731	Multicopper oxidase
AL504_RS16385	PF07732	Multicopper oxidase
AL504_RS16400	PF01842	ACT domain
AL504_RS16400	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL504_RS16400	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AL504_RS16415	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS16415	PF00593	TonB dependent receptor
AL504_RS16430	PF03466	LysR substrate binding domain
AL504_RS16430	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS16440	PF02682	Carboxyltransferase domain, subdomain C and D
AL504_RS16445	PF02626	Carboxyltransferase domain, subdomain A and B 
AL504_RS16450	PF03746	LamB/YcsF family
AL504_RS16455	PF07729	FCD domain
AL504_RS16455	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS16460	PF03458	UPF0126 domain
AL504_RS16470	PF07690	Major Facilitator Superfamily
AL504_RS16475	PF07021	Methionine biosynthesis protein MetW
AL504_RS16475	PF00561	alpha/beta hydrolase fold
AL504_RS16480	PF00561	alpha/beta hydrolase fold
AL504_RS16485	PF07702	UTRA domain
AL504_RS16485	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS16490	PF08666	SAF domain
AL504_RS16495	PF04295	D-galactarate dehydratase / Altronate hydrolase, C terminus
AL504_RS16500	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS16505	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL504_RS16505	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AL504_RS16510	PF02615	Malate/L-lactate dehydrogenase
AL504_RS16535	PF00561	alpha/beta hydrolase fold
AL504_RS16540	PF04262	Glutamate-cysteine ligase 
AL504_RS16550	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
AL504_RS16555	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS16560	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS16560	PF03466	LysR substrate binding domain
AL504_RS16570	PF07729	FCD domain
AL504_RS16570	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS16575	PF00795	Carbon-nitrogen hydrolase
AL504_RS16580	PF00005	ABC transporter
AL504_RS16585	PF00005	ABC transporter
AL504_RS16590	PF02653	Branched-chain amino acid transport system / permease component
AL504_RS16590	PF11862	Domain of unknown function (DUF3382)
AL504_RS16595	PF02653	Branched-chain amino acid transport system / permease component
AL504_RS16605	PF01557	Fumarylacetoacetate (FAA) hydrolase family
AL504_RS16610	PF07883	Cupin domain
AL504_RS16620	PF13609	Gram-negative porin
AL504_RS16625	PF07690	Major Facilitator Superfamily
AL504_RS16630	PF03466	LysR substrate binding domain
AL504_RS16630	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS16640	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
AL504_RS16645	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
AL504_RS16645	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
AL504_RS16645	PF18321	3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain
AL504_RS16655	PF02770	Acyl-CoA dehydrogenase, middle domain
AL504_RS16655	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL504_RS16655	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL504_RS16660	PF00440	Bacterial regulatory proteins, tetR family
AL504_RS16665	PF03060	Nitronate monooxygenase
AL504_RS16670	PF00378	Enoyl-CoA hydratase/isomerase
AL504_RS16675	PF00378	Enoyl-CoA hydratase/isomerase
AL504_RS16680	PF01256	Carbohydrate kinase
AL504_RS16690	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL504_RS16695	PF03466	LysR substrate binding domain
AL504_RS16695	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS16705	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
AL504_RS16710	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL504_RS16715	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS16720	PF12911	N-terminal TM domain of oligopeptide transport permease C
AL504_RS16720	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS16725	PF00005	ABC transporter
AL504_RS16725	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL504_RS16730	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL504_RS16730	PF00005	ABC transporter
AL504_RS16740	PF07687	Peptidase dimerisation domain
AL504_RS16740	PF01546	Peptidase family M20/M25/M40
AL504_RS16745	PF14789	Tetrahydrodipicolinate N-succinyltransferase middle
AL504_RS16745	PF14602	Hexapeptide repeat of succinyl-transferase
AL504_RS16750	PF01965	DJ-1/PfpI family
AL504_RS16750	PF12833	Helix-turn-helix domain
AL504_RS16755	PF00106	short chain dehydrogenase
AL504_RS16760	PF01380	SIS domain
AL504_RS16765	PF01212	Beta-eliminating lyase
AL504_RS16770	PF12833	Helix-turn-helix domain
AL504_RS16775	PF00580	UvrD/REP helicase N-terminal domain
AL504_RS16775	PF13361	UvrD-like helicase C-terminal domain
AL504_RS16780	PF00270	DEAD/DEAH box helicase
AL504_RS16780	PF18074	Primosomal protein N C-terminal domain
AL504_RS16780	PF00271	Helicase conserved C-terminal domain
AL504_RS16780	PF17764	3′ DNA-binding domain (3′BD)
AL504_RS16780	PF18319	PriA DNA helicase Cys-rich region (CRR) domain
AL504_RS16785	PF01208	Uroporphyrinogen decarboxylase (URO-D)
AL504_RS16795	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
AL504_RS16800	PF02874	ATP synthase alpha/beta family, beta-barrel domain
AL504_RS16800	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AL504_RS16805	PF00231	ATP synthase
AL504_RS16815	PF00213	ATP synthase delta (OSCP) subunit
AL504_RS16820	PF00430	ATP synthase B/B' CF(0)
AL504_RS16825	PF00137	ATP synthase subunit C
AL504_RS16830	PF00119	ATP synthase A chain
AL504_RS16845	PF00378	Enoyl-CoA hydratase/isomerase
AL504_RS16855	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS16860	PF01144	Coenzyme A transferase
AL504_RS16865	PF01144	Coenzyme A transferase
AL504_RS16870	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS16875	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS16875	PF03466	LysR substrate binding domain
AL504_RS16880	PF17645	Arylmalonate decarboxylase
AL504_RS16900	PF08406	CbbQ/NirQ/NorQ C-terminal 
AL504_RS16900	PF07728	AAA domain (dynein-related subfamily)
AL504_RS16905	PF00795	Carbon-nitrogen hydrolase
AL504_RS16910	PF00005	ABC transporter
AL504_RS16915	PF00005	ABC transporter
AL504_RS16915	PF12399	Branched-chain amino acid ATP-binding cassette transporter
AL504_RS16920	PF02653	Branched-chain amino acid transport system / permease component
AL504_RS16925	PF02653	Branched-chain amino acid transport system / permease component
AL504_RS16930	PF13458	Periplasmic binding protein
AL504_RS16940	PF00593	TonB dependent receptor
AL504_RS16940	PF07660	Secretin and TonB N terminus short domain
AL504_RS16940	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS16945	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS16945	PF03466	LysR substrate binding domain
AL504_RS16950	PF12146	Serine aminopeptidase, S33
AL504_RS16960	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL504_RS16970	PF01171	PP-loop family
AL504_RS16975	PF01842	ACT domain
AL504_RS16975	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AL504_RS16975	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL504_RS16980	PF10411	Disulfide bond isomerase protein N-terminus
AL504_RS16980	PF13098	Thioredoxin-like domain
AL504_RS16985	PF01494	FAD binding domain
AL504_RS16995	PF04379	ApaG domain 
AL504_RS17000	PF00834	Ribulose-phosphate 3 epimerase family
AL504_RS17005	PF13419	Haloacid dehalogenase-like hydrolase
AL504_RS17010	PF00425	chorismate binding enzyme
AL504_RS17010	PF04715	Anthranilate synthase component I, N terminal region
AL504_RS17015	PF00117	Glutamine amidotransferase class-I
AL504_RS17020	PF02885	Glycosyl transferase family, helical bundle domain
AL504_RS17020	PF00591	Glycosyl transferase family, a/b domain
AL504_RS17025	PF00218	Indole-3-glycerol phosphate synthase
AL504_RS17030	PF00158	Sigma-54 interaction domain
AL504_RS17030	PF02954	Bacterial regulatory protein, Fis family
AL504_RS17030	PF01590	GAF domain
AL504_RS17035	PF00171	Aldehyde dehydrogenase family
AL504_RS17045	PF01323	DSBA-like thioredoxin domain
AL504_RS17055	PF03466	LysR substrate binding domain
AL504_RS17055	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS17075	PF00578	AhpC/TSA family
AL504_RS17080	PF00535	Glycosyl transferase family 2
AL504_RS17080	PF01501	Glycosyl transferase family 8
AL504_RS17090	PF00009	Elongation factor Tu GTP binding domain
AL504_RS17090	PF09106	Elongation factor SelB, winged helix 
AL504_RS17090	PF03144	Elongation factor Tu domain 2
AL504_RS17090	PF09107	Elongation factor SelB, winged helix 
AL504_RS17095	PF03841	L-seryl-tRNA selenium transferase
AL504_RS17095	PF12390	Selenocysteine synthase N terminal
AL504_RS17100	PF04216	Protein involved in formate dehydrogenase formation
AL504_RS17105	PF01292	Prokaryotic cytochrome b561
AL504_RS17110	PF13247	4Fe-4S dicluster domain
AL504_RS17110	PF12800	4Fe-4S binding domain
AL504_RS17110	PF09163	Formate dehydrogenase N, transmembrane
AL504_RS17115	PF01568	Molydopterin dinucleotide binding domain
AL504_RS17115	PF00384	Molybdopterin oxidoreductase
AL504_RS17115	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AL504_RS17120	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AL504_RS17120	PF00384	Molybdopterin oxidoreductase
AL504_RS17120	PF01568	Molydopterin dinucleotide binding domain
AL504_RS17130	PF03061	Thioesterase superfamily
AL504_RS17165	PF03459	TOBE domain
AL504_RS17170	PF00005	ABC transporter
AL504_RS17175	PF03180	NLPA lipoprotein
AL504_RS17180	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS17185	PF09383	NIL domain
AL504_RS17185	PF00005	ABC transporter
AL504_RS17190	PF08028	Acyl-CoA dehydrogenase, C-terminal domain
AL504_RS17190	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL504_RS17195	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS17200	PF00296	Luciferase-like monooxygenase
AL504_RS17205	PF09084	NMT1/THI5 like
AL504_RS17210	PF03358	NADPH-dependent FMN reductase
AL504_RS17215	PF03180	NLPA lipoprotein
AL504_RS17220	PF00296	Luciferase-like monooxygenase
AL504_RS17225	PF08028	Acyl-CoA dehydrogenase, C-terminal domain
AL504_RS17225	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL504_RS17230	PF08028	Acyl-CoA dehydrogenase, C-terminal domain
AL504_RS17230	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL504_RS17240	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL504_RS17245	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS17250	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS17250	PF12911	N-terminal TM domain of oligopeptide transport permease C
AL504_RS17255	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL504_RS17255	PF00005	ABC transporter
AL504_RS17260	PF00582	Universal stress protein family
AL504_RS17265	PF00970	Oxidoreductase FAD-binding domain
AL504_RS17265	PF00175	Oxidoreductase NAD-binding domain 
AL504_RS17265	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL504_RS17275	PF00171	Aldehyde dehydrogenase family
AL504_RS17290	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS17290	PF07729	FCD domain
AL504_RS17350	PF00577	Outer membrane usher protein
AL504_RS17350	PF13954	PapC N-terminal domain
AL504_RS17350	PF13953	PapC C-terminal domain
AL504_RS17365	PF07690	Major Facilitator Superfamily
AL504_RS17370	PF00672	HAMP domain
AL504_RS17370	PF02203	Tar ligand binding domain homologue
AL504_RS17370	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL504_RS17375	PF01979	Amidohydrolase family
AL504_RS17380	PF00221	Aromatic amino acid lyase
AL504_RS17385	PF02133	Permease for cytosine/purines, uracil, thiamine, allantoin
AL504_RS17390	PF17392	Urocanase C-terminal domain
AL504_RS17390	PF17391	Urocanase N-terminal domain
AL504_RS17390	PF01175	Urocanase Rossmann-like domain
AL504_RS17395	PF05962	HutD
AL504_RS17400	PF07702	UTRA domain
AL504_RS17400	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS17405	PF02583	Metal-sensitive transcriptional repressor
AL504_RS17410	PF08240	Alcohol dehydrogenase GroES-like domain
AL504_RS17410	PF00107	Zinc-binding dehydrogenase
AL504_RS17430	PF00672	HAMP domain
AL504_RS17430	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS17430	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS17435	PF00072	Response regulator receiver domain
AL504_RS17435	PF00486	Transcriptional regulatory protein, C terminal
AL504_RS17445	PF02321	Outer membrane efflux protein
AL504_RS17450	PF00529	HlyD membrane-fusion protein of T1SS
AL504_RS17450	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
AL504_RS17455	PF00873	AcrB/AcrD/AcrF family
AL504_RS17460	PF00535	Glycosyl transferase family 2
AL504_RS17465	PF02366	Dolichyl-phosphate-mannose-protein mannosyltransferase  
AL504_RS17470	PF00491	Arginase family
AL504_RS17475	PF00474	Sodium:solute symporter family
AL504_RS17480	PF03466	LysR substrate binding domain
AL504_RS17480	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS17485	PF02548	Ketopantoate hydroxymethyltransferase
AL504_RS17490	PF01926	50S ribosome-binding GTPase
AL504_RS17495	PF00563	EAL domain
AL504_RS17495	PF08448	PAS fold
AL504_RS17495	PF00990	Diguanylate cyclase, GGDEF domain
AL504_RS17495	PF08447	PAS fold
AL504_RS17500	PF02423	Ornithine cyclodeaminase/mu-crystallin family
AL504_RS17505	PF03466	LysR substrate binding domain
AL504_RS17505	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS17510	PF07690	Major Facilitator Superfamily
AL504_RS17520	PF17284	Spermidine synthase tetramerisation domain
AL504_RS17535	PF00296	Luciferase-like monooxygenase
AL504_RS17540	PF00005	ABC transporter
AL504_RS17550	PF01032	FecCD transport family
AL504_RS17555	PF01497	Periplasmic binding protein
AL504_RS17560	PF00593	TonB dependent receptor
AL504_RS17560	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS17565	PF12833	Helix-turn-helix domain
AL504_RS17580	PF01613	Flavin reductase like domain
AL504_RS17595	PF08281	Sigma-70, region 4
AL504_RS17595	PF04542	Sigma-70 region 2 
AL504_RS17605	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS17605	PF00593	TonB dependent receptor
AL504_RS17610	PF01380	SIS domain
AL504_RS17635	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
AL504_RS17635	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
AL504_RS17635	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
AL504_RS17640	PF07690	Major Facilitator Superfamily
AL504_RS17645	PF14602	Hexapeptide repeat of succinyl-transferase
AL504_RS17645	PF00132	Bacterial transferase hexapeptide (six repeats)
AL504_RS17645	PF12804	MobA-like NTP transferase domain
AL504_RS17665	PF02630	SCO1/SenC
AL504_RS17670	PF01040	UbiA prenyltransferase family
AL504_RS17675	PF02628	Cytochrome oxidase assembly protein
AL504_RS17695	PF00510	Cytochrome c oxidase subunit III
AL504_RS17705	PF00115	Cytochrome C and Quinol oxidase polypeptide I
AL504_RS17710	PF02790	Cytochrome C oxidase subunit II, transmembrane domain
AL504_RS17710	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
AL504_RS17720	PF00999	Sodium/hydrogen exchanger family
AL504_RS17725	PF00149	Calcineurin-like phosphoesterase
AL504_RS17730	PF00140	Sigma-70 factor, region 1.2
AL504_RS17730	PF04545	Sigma-70, region 4
AL504_RS17730	PF04542	Sigma-70 region 2 
AL504_RS17740	PF00756	Putative esterase
AL504_RS17750	PF00310	Glutamine amidotransferases class-II
AL504_RS17750	PF04898	Glutamate synthase central domain
AL504_RS17750	PF01645	Conserved region in glutamate synthase
AL504_RS17750	PF01493	GXGXG motif
AL504_RS17760	PF02417	Chromate transporter
AL504_RS17775	PF02626	Carboxyltransferase domain, subdomain A and B 
AL504_RS17785	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AL504_RS17785	PF02785	Biotin carboxylase C-terminal domain
AL504_RS17785	PF00289	Biotin carboxylase, N-terminal domain
AL504_RS17790	PF00364	Biotin-requiring enzyme
AL504_RS17795	PF03746	LamB/YcsF family
AL504_RS17800	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS17800	PF03466	LysR substrate binding domain
AL504_RS17805	PF03922	OmpW family
AL504_RS17810	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS17810	PF03466	LysR substrate binding domain
AL504_RS17815	PF06779	Uncharacterised MFS-type transporter YbfB
AL504_RS17820	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS17825	PF03060	Nitronate monooxygenase
AL504_RS17830	PF00005	ABC transporter
AL504_RS17835	PF02405	Permease MlaE
AL504_RS17840	PF02470	MlaD protein
AL504_RS17845	PF04333	MlaA lipoprotein
AL504_RS17855	PF00005	ABC transporter
AL504_RS17860	PF01061	ABC-2 type transporter
AL504_RS17870	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
AL504_RS17875	PF01634	ATP phosphoribosyltransferase
AL504_RS17880	PF00815	Histidinol dehydrogenase
AL504_RS17885	PF00155	Aminotransferase class I and II
AL504_RS17890	PF00475	Imidazoleglycerol-phosphate dehydratase
AL504_RS17895	PF00117	Glutamine amidotransferase class-I
AL504_RS17900	PF00977	Histidine biosynthesis protein
AL504_RS17905	PF00977	Histidine biosynthesis protein
AL504_RS17910	PF01502	Phosphoribosyl-AMP cyclohydrolase
AL504_RS17915	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
AL504_RS17920	PF01230	HIT domain
AL504_RS17925	PF02416	mttA/Hcf106 family
AL504_RS17930	PF02416	mttA/Hcf106 family
AL504_RS17935	PF00902	Sec-independent protein translocase protein (TatC)
AL504_RS17950	PF01784	NIF3 (NGG1p interacting factor 3)
AL504_RS17955	PF01741	Large-conductance mechanosensitive channel, MscL
AL504_RS17960	PF00355	Rieske [2Fe-2S] domain
AL504_RS17960	PF10399	Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal
AL504_RS17965	PF00032	Cytochrome b(C-terminal)/b6/petD
AL504_RS17965	PF00033	Cytochrome b/b6/petB
AL504_RS17970	PF02167	Cytochrome C1 family
AL504_RS17975	PF00043	Glutathione S-transferase, C-terminal domain
AL504_RS17975	PF02798	Glutathione S-transferase, N-terminal domain
AL504_RS17980	PF04386	Stringent starvation protein B
AL504_RS18020	PF06067	Domain of unknown function (DUF932)
AL504_RS18025	PF02195	ParB-like nuclease domain
AL504_RS18040	PF05284	Protein of unknown function (DUF736)
AL504_RS18050	PF01381	Helix-turn-helix
AL504_RS18075	PF13614	AAA domain
AL504_RS18090	PF10502	Signal peptidase, peptidase S26 
AL504_RS18100	PF00378	Enoyl-CoA hydratase/isomerase
AL504_RS18105	PF00106	short chain dehydrogenase
AL504_RS18110	PF00378	Enoyl-CoA hydratase/isomerase
AL504_RS18115	PF02803	Thiolase, C-terminal domain
AL504_RS18115	PF00108	Thiolase, N-terminal domain
AL504_RS18120	PF00501	AMP-binding enzyme
AL504_RS18120	PF13193	AMP-binding enzyme C-terminal domain
AL504_RS18125	PF02515	CoA-transferase family III
AL504_RS18130	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL504_RS18130	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL504_RS18130	PF02770	Acyl-CoA dehydrogenase, middle domain
AL504_RS18145	PF07690	Major Facilitator Superfamily
AL504_RS18150	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL504_RS18150	PF02770	Acyl-CoA dehydrogenase, middle domain
AL504_RS18150	PF12806	Acetyl-CoA dehydrogenase C-terminal like
AL504_RS18150	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL504_RS18155	PF01575	MaoC like domain
AL504_RS18160	PF01012	Electron transfer flavoprotein domain
AL504_RS18165	PF00766	Electron transfer flavoprotein FAD-binding domain
AL504_RS18165	PF01012	Electron transfer flavoprotein domain
AL504_RS18170	PF03466	LysR substrate binding domain
AL504_RS18170	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS18180	PF02534	Type IV secretory system Conjugative DNA transfer
AL504_RS18190	PF00437	Type II/IV secretion system protein
AL504_RS18195	PF04956	TrbC/VIRB2 family
AL504_RS18205	PF03135	CagE, TrbE, VirB family, component of type IV transporter system
AL504_RS18215	PF04610	TrbL/VirB6 plasmid conjugal transfer protein
AL504_RS18225	PF03524	Conjugal transfer protein
AL504_RS18250	PF02447	GntP family permease
AL504_RS18265	PF03466	LysR substrate binding domain
AL504_RS18265	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS18275	PF00266	Aminotransferase class-V
AL504_RS18285	PF12833	Helix-turn-helix domain
AL504_RS18285	PF06445	GyrI-like small molecule binding domain
AL504_RS18295	PF01926	50S ribosome-binding GTPase
AL504_RS18295	PF12631	MnmE helical domain
AL504_RS18295	PF10396	GTP-binding protein TrmE N-terminus
AL504_RS18300	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL504_RS18305	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS18310	PF12911	N-terminal TM domain of oligopeptide transport permease C
AL504_RS18310	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS18315	PF00005	ABC transporter
AL504_RS18315	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL504_RS18320	PF01979	Amidohydrolase family
AL504_RS18325	PF06097	Bacterial protein of unknown function (DUF945)
AL504_RS18330	PF06097	Bacterial protein of unknown function (DUF945)
AL504_RS18335	PF00271	Helicase conserved C-terminal domain
AL504_RS18335	PF00270	DEAD/DEAH box helicase
AL504_RS18340	PF01810	LysE type translocator
AL504_RS18355	PF00210	Ferritin-like domain
AL504_RS18360	PF00892	EamA-like transporter family
AL504_RS18365	PF03466	LysR substrate binding domain
AL504_RS18365	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS18380	PF04963	Sigma-54 factor, core binding domain
AL504_RS18380	PF00309	Sigma-54 factor, Activator interacting domain (AID) 
AL504_RS18380	PF04552	Sigma-54, DNA binding domain
AL504_RS18390	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS18395	PF00682	HMGL-like
AL504_RS18395	PF08502	LeuA allosteric (dimerisation) domain
AL504_RS18400	PF01425	Amidase
AL504_RS18405	PF00356	Bacterial regulatory proteins, lacI family
AL504_RS18410	PF00149	Calcineurin-like phosphoesterase
AL504_RS18415	PF00005	ABC transporter
AL504_RS18415	PF08402	TOBE domain
AL504_RS18420	PF13416	Bacterial extracellular solute-binding protein
AL504_RS18425	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS18430	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS18465	PF00750	tRNA synthetases class I (R)
AL504_RS18465	PF03485	Arginyl tRNA synthetase N terminal domain
AL504_RS18465	PF05746	DALR anticodon binding domain
AL504_RS18475	PF00085	Thioredoxin
AL504_RS18475	PF01323	DSBA-like thioredoxin domain
AL504_RS18485	PF00561	alpha/beta hydrolase fold
AL504_RS18490	PF01053	Cys/Met metabolism PLP-dependent enzyme
AL504_RS18500	PF01810	LysE type translocator
AL504_RS18510	PF09278	MerR, DNA binding
AL504_RS18510	PF00376	MerR family regulatory protein
AL504_RS18515	PF02694	Uncharacterised BCR, YnfA/UPF0060 family
AL504_RS18525	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS18530	PF07687	Peptidase dimerisation domain
AL504_RS18530	PF01546	Peptidase family M20/M25/M40
AL504_RS18535	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL504_RS18535	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL504_RS18535	PF02770	Acyl-CoA dehydrogenase, middle domain
AL504_RS18540	PF06315	Isocitrate dehydrogenase kinase/phosphatase (AceK)
AL504_RS18550	PF01039	Carboxyl transferase domain
AL504_RS18555	PF00364	Biotin-requiring enzyme
AL504_RS18555	PF02785	Biotin carboxylase C-terminal domain
AL504_RS18555	PF00289	Biotin carboxylase, N-terminal domain
AL504_RS18555	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AL504_RS18570	PF05977	Transmembrane secretion effector
AL504_RS18590	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS18615	PF00501	AMP-binding enzyme
AL504_RS18615	PF13193	AMP-binding enzyme C-terminal domain
AL504_RS18620	PF08281	Sigma-70, region 4
AL504_RS18620	PF04542	Sigma-70 region 2 
AL504_RS18630	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS18630	PF07660	Secretin and TonB N terminus short domain
AL504_RS18630	PF00593	TonB dependent receptor
AL504_RS18640	PF07702	UTRA domain
AL504_RS18640	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS18650	PF00857	Isochorismatase family
AL504_RS18655	PF01810	LysE type translocator
AL504_RS18670	PF06803	Protein of unknown function (DUF1232)
AL504_RS18675	PF13332	Hemagglutinin repeat
AL504_RS18675	PF05860	haemagglutination activity domain
AL504_RS18675	PF04829	Pre-toxin domain with VENN motif
AL504_RS18675	PF13332	Hemagglutinin repeat
AL504_RS18675	PF04829	Pre-toxin domain with VENN motif
AL504_RS18675	PF05860	haemagglutination activity domain
AL504_RS18680	PF06296	RelE toxin of RelE / RelB toxin-antitoxin system
AL504_RS18705	PF01965	DJ-1/PfpI family
AL504_RS18705	PF12833	Helix-turn-helix domain
AL504_RS18725	PF08281	Sigma-70, region 4
AL504_RS18725	PF04542	Sigma-70 region 2 
AL504_RS18730	PF04773	FecR protein
AL504_RS18730	PF16220	Domain of unknown function (DUF4880)
AL504_RS18735	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS18735	PF00593	TonB dependent receptor
AL504_RS18740	PF00202	Aminotransferase class-III
AL504_RS18745	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS18760	PF00440	Bacterial regulatory proteins, tetR family
AL504_RS18760	PF08362	YcdC-like protein, C-terminal region
AL504_RS18765	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL504_RS18770	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS18775	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS18780	PF00005	ABC transporter
AL504_RS18790	PF01168	Alanine racemase, N-terminal domain
AL504_RS18790	PF14031	Putative serine dehydratase domain
AL504_RS18795	PF16868	NMT1-like family
AL504_RS18805	PF04361	Protein of unknown function (DUF494)
AL504_RS18810	PF00749	tRNA synthetases class I (E and Q), catalytic domain
AL504_RS18820	PF01751	Toprim domain
AL504_RS18820	PF01131	DNA topoisomerase
AL504_RS18830	PF00005	ABC transporter
AL504_RS18835	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS18845	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AL504_RS18845	PF00205	Thiamine pyrophosphate enzyme, central domain
AL504_RS18845	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AL504_RS18850	PF01037	Lrp/AsnC ligand binding domain
AL504_RS18855	PF01062	Bestrophin, RFP-TM, chloride channel
AL504_RS18865	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
AL504_RS18870	PF07690	Major Facilitator Superfamily
AL504_RS18875	PF00440	Bacterial regulatory proteins, tetR family
AL504_RS18885	PF01613	Flavin reductase like domain
AL504_RS18900	PF02558	Ketopantoate reductase PanE/ApbA
AL504_RS18900	PF08546	Ketopantoate reductase PanE/ApbA C terminal
AL504_RS18910	PF02608	ABC transporter substrate-binding protein PnrA-like
AL504_RS18915	PF00005	ABC transporter
AL504_RS18920	PF02653	Branched-chain amino acid transport system / permease component
AL504_RS18930	PF07969	Amidohydrolase family
AL504_RS18935	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS18940	PF01266	FAD dependent oxidoreductase
AL504_RS18945	PF03466	LysR substrate binding domain
AL504_RS18945	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS18950	PF01042	Endoribonuclease L-PSP
AL504_RS18960	PF04324	BFD-like [2Fe-2S] binding domain
AL504_RS18960	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL504_RS18970	PF01266	FAD dependent oxidoreductase
AL504_RS18975	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS18980	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS18985	PF08402	TOBE domain
AL504_RS18985	PF00005	ABC transporter
AL504_RS18995	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS19005	PF05378	Hydantoinase/oxoprolinase N-terminal region
AL504_RS19005	PF01968	Hydantoinase/oxoprolinase
AL504_RS19010	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS19015	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS19015	PF03466	LysR substrate binding domain
AL504_RS19025	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL504_RS19040	PF04324	BFD-like [2Fe-2S] binding domain
AL504_RS19040	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL504_RS19050	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS19055	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS19060	PF00005	ABC transporter
AL504_RS19060	PF08402	TOBE domain
AL504_RS19075	PF01070	FMN-dependent dehydrogenase
AL504_RS19085	PF00708	Acylphosphatase
AL504_RS19090	PF00892	EamA-like transporter family
AL504_RS19095	PF01212	Beta-eliminating lyase
AL504_RS19100	PF00005	ABC transporter
AL504_RS19105	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS19110	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS19115	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL504_RS19120	PF03466	LysR substrate binding domain
AL504_RS19120	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS19130	PF07969	Amidohydrolase family
AL504_RS19140	PF02678	Pirin
AL504_RS19140	PF17954	Quercetinase C-terminal cupin domain
AL504_RS19145	PF07690	Major Facilitator Superfamily
AL504_RS19155	PF03466	LysR substrate binding domain
AL504_RS19155	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS19160	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS19160	PF18053	DNA gyrase B subunit insert domain
AL504_RS19160	PF00986	DNA gyrase B subunit, carboxyl terminus
AL504_RS19160	PF00204	DNA gyrase B
AL504_RS19160	PF01751	Toprim domain
AL504_RS19165	PF02767	DNA polymerase III beta subunit, central domain
AL504_RS19165	PF02768	DNA polymerase III beta subunit, C-terminal domain
AL504_RS19165	PF00712	DNA polymerase III beta subunit, N-terminal domain
AL504_RS19170	PF00308	Bacterial dnaA  protein
AL504_RS19170	PF08299	Bacterial dnaA protein helix-turn-helix
AL504_RS19170	PF11638	DnaA N-terminal domain
AL504_RS19175	PF00468	Ribosomal protein L34
AL504_RS19180	PF00825	Ribonuclease P
AL504_RS19190	PF06628	Catalase-related immune-responsive
AL504_RS19190	PF00199	Catalase
AL504_RS19195	PF00291	Pyridoxal-phosphate dependent enzyme
AL504_RS19205	PF16220	Domain of unknown function (DUF4880)
AL504_RS19205	PF04773	FecR protein
AL504_RS19210	PF07660	Secretin and TonB N terminus short domain
AL504_RS19210	PF00593	TonB dependent receptor
AL504_RS19210	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS19215	PF02668	Taurine catabolism dioxygenase TauD, TfdA family
AL504_RS19220	PF07687	Peptidase dimerisation domain
AL504_RS19220	PF01546	Peptidase family M20/M25/M40
AL504_RS19225	PF00005	ABC transporter
AL504_RS19225	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL504_RS19230	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL504_RS19230	PF00005	ABC transporter
AL504_RS19235	PF12911	N-terminal TM domain of oligopeptide transport permease C
AL504_RS19235	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS19240	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS19245	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL504_RS19250	PF01926	50S ribosome-binding GTPase
AL504_RS19250	PF12631	MnmE helical domain
AL504_RS19250	PF10396	GTP-binding protein TrmE N-terminus
AL504_RS19260	PF00654	Voltage gated chloride channel
AL504_RS19265	PF00486	Transcriptional regulatory protein, C terminal
AL504_RS19265	PF00072	Response regulator receiver domain
AL504_RS19285	PF01970	Tripartite tricarboxylate transporter TctA family
AL504_RS19290	PF00155	Aminotransferase class I and II
AL504_RS19295	PF05145	Transition state regulatory protein AbrB
AL504_RS19300	PF00313	'Cold-shock' DNA-binding domain
AL504_RS19305	PF13932	GidA associated domain
AL504_RS19305	PF01134	Glucose inhibited division protein A
AL504_RS19310	PF02527	rRNA small subunit methyltransferase G
AL504_RS19315	PF13614	AAA domain
AL504_RS19325	PF17762	HTH domain found in ParB protein
AL504_RS19325	PF02195	ParB-like nuclease domain
AL504_RS19330	PF17763	Glutaminase/Asparaginase C-terminal domain
AL504_RS19330	PF00710	Asparaginase, N-terminal
AL504_RS19335	PF03466	LysR substrate binding domain
AL504_RS19335	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS19345	PF01053	Cys/Met metabolism PLP-dependent enzyme
AL504_RS19355	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS19360	PF00455	DeoR C terminal sensor domain
AL504_RS19360	PF08220	DeoR-like helix-turn-helix domain
AL504_RS19370	PF08402	TOBE domain
AL504_RS19370	PF00005	ABC transporter
AL504_RS19380	PF00459	Inositol monophosphatase family
AL504_RS19385	PF00120	Glutamine synthetase, catalytic domain
AL504_RS19390	PF00171	Aldehyde dehydrogenase family
AL504_RS19395	PF00465	Iron-containing alcohol dehydrogenase 
AL504_RS19415	PF03143	Elongation factor Tu C-terminal domain
AL504_RS19415	PF00009	Elongation factor Tu GTP binding domain
AL504_RS19415	PF03144	Elongation factor Tu domain 2
AL504_RS19425	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
AL504_RS19430	PF02357	Transcription termination factor nusG
AL504_RS19430	PF00467	KOW motif
AL504_RS19435	PF00298	Ribosomal protein L11, RNA binding domain
AL504_RS19435	PF03946	Ribosomal protein L11, N-terminal domain
AL504_RS19440	PF00687	Ribosomal protein L1p/L10e family
AL504_RS19445	PF00466	Ribosomal protein L10
AL504_RS19450	PF16320	Ribosomal protein L7/L12 dimerisation domain
AL504_RS19450	PF00542	Ribosomal protein L7/L12 C-terminal domain
AL504_RS19455	PF04563	RNA polymerase beta subunit
AL504_RS19455	PF04561	RNA polymerase Rpb2, domain 2
AL504_RS19455	PF10385	RNA polymerase beta subunit external 1 domain
AL504_RS19455	PF00562	RNA polymerase Rpb2, domain 6
AL504_RS19455	PF04565	RNA polymerase Rpb2, domain 3
AL504_RS19455	PF04560	RNA polymerase Rpb2, domain 7
AL504_RS19460	PF04998	RNA polymerase Rpb1, domain 5
AL504_RS19460	PF04983	RNA polymerase Rpb1, domain 3
AL504_RS19460	PF04997	RNA polymerase Rpb1, domain 1
AL504_RS19460	PF00623	RNA polymerase Rpb1, domain 2
AL504_RS19460	PF05000	RNA polymerase Rpb1, domain 4
AL504_RS19475	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS19475	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS19475	PF00989	PAS fold
AL504_RS19475	PF16736	Single Cache-like 
AL504_RS19485	PF00072	Response regulator receiver domain
AL504_RS19485	PF00486	Transcriptional regulatory protein, C terminal
AL504_RS19490	PF00072	Response regulator receiver domain
AL504_RS19490	PF00486	Transcriptional regulatory protein, C terminal
AL504_RS19495	PF00164	Ribosomal protein S12/S23
AL504_RS19500	PF00177	Ribosomal protein S7p/S5e
AL504_RS19505	PF03144	Elongation factor Tu domain 2
AL504_RS19505	PF00679	Elongation factor G C-terminus
AL504_RS19505	PF14492	Elongation Factor G, domain II
AL504_RS19505	PF00009	Elongation factor Tu GTP binding domain
AL504_RS19505	PF03764	Elongation factor G, domain IV
AL504_RS19510	PF03143	Elongation factor Tu C-terminal domain
AL504_RS19510	PF00009	Elongation factor Tu GTP binding domain
AL504_RS19510	PF03144	Elongation factor Tu domain 2
AL504_RS19515	PF00338	Ribosomal protein S10p/S20e
AL504_RS19520	PF00297	Ribosomal protein L3
AL504_RS19525	PF00573	Ribosomal protein L4/L1 family
AL504_RS19530	PF00276	Ribosomal protein L23
AL504_RS19535	PF03947	Ribosomal Proteins L2, C-terminal domain
AL504_RS19535	PF00181	Ribosomal Proteins L2, RNA binding domain
AL504_RS19540	PF00203	Ribosomal protein S19
AL504_RS19545	PF00237	Ribosomal protein L22p/L17e
AL504_RS19550	PF00189	Ribosomal protein S3, C-terminal domain
AL504_RS19550	PF07650	KH domain
AL504_RS19555	PF00252	Ribosomal protein L16p/L10e
AL504_RS19560	PF00831	Ribosomal L29 protein
AL504_RS19565	PF00366	Ribosomal protein S17
AL504_RS19575	PF13807	G-rich domain on putative tyrosine kinase
AL504_RS19575	PF13614	AAA domain
AL504_RS19575	PF02706	Chain length determinant protein
AL504_RS19580	PF04932	O-Antigen ligase
AL504_RS19590	PF00535	Glycosyl transferase family 2
AL504_RS19605	PF01757	Acyltransferase family
AL504_RS19620	PF00732	GMC oxidoreductase
AL504_RS19620	PF00732	GMC oxidoreductase
AL504_RS19620	PF05199	GMC oxidoreductase
AL504_RS19620	PF05199	GMC oxidoreductase
AL504_RS19635	PF03808	Glycosyl transferase WecB/TagA/CpsF family
AL504_RS19645	PF02397	Bacterial sugar transferase
AL504_RS19650	PF01050	Mannose-6-phosphate isomerase
AL504_RS19650	PF00483	Nucleotidyl transferase
AL504_RS19665	PF10609	NUBPL iron-transfer P-loop NTPase
AL504_RS19670	PF03552	Cellulose synthase
AL504_RS19670	PF00535	Glycosyl transferase family 2
AL504_RS19670	PF07238	PilZ domain
AL504_RS19675	PF03170	Bacterial cellulose synthase subunit
AL504_RS19680	PF03170	Bacterial cellulose synthase subunit
AL504_RS19685	PF01270	Glycosyl hydrolases family 8
AL504_RS19690	PF13181	Tetratricopeptide repeat
AL504_RS19690	PF05420	Cellulose synthase operon protein C C-terminus (BCSC_C)
AL504_RS19705	PF03062	MBOAT, membrane-bound O-acyltransferase family
AL504_RS19710	PF16824	C-terminal carbohydrate-binding module
AL504_RS19710	PF16822	SGNH hydrolase-like domain, acetyltransferase AlgX
AL504_RS19725	PF02653	Branched-chain amino acid transport system / permease component
AL504_RS19725	PF11862	Domain of unknown function (DUF3382)
AL504_RS19730	PF00005	ABC transporter
AL504_RS19735	PF00005	ABC transporter
AL504_RS19735	PF12399	Branched-chain amino acid ATP-binding cassette transporter
AL504_RS19750	PF14525	AraC-binding-like domain
AL504_RS19750	PF12833	Helix-turn-helix domain
AL504_RS19760	PF00171	Aldehyde dehydrogenase family
AL504_RS19770	PF00238	Ribosomal protein L14p/L23e
AL504_RS19775	PF17136	Ribosomal proteins 50S L24/mitochondrial 39S L24
AL504_RS19780	PF00673	ribosomal L5P family C-terminus
AL504_RS19780	PF00281	Ribosomal protein L5
AL504_RS19785	PF00253	Ribosomal protein S14p/S29e
AL504_RS19790	PF00410	Ribosomal protein S8
AL504_RS19795	PF00347	Ribosomal protein L6
AL504_RS19800	PF00861	Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
AL504_RS19805	PF03719	Ribosomal protein S5, C-terminal domain
AL504_RS19805	PF00333	Ribosomal protein S5, N-terminal domain
AL504_RS19810	PF00327	Ribosomal protein L30p/L7e
AL504_RS19815	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
AL504_RS19820	PF00344	SecY translocase
AL504_RS19825	PF01176	Translation initiation factor 1A / IF-1
AL504_RS19830	PF00416	Ribosomal protein S13/S18
AL504_RS19835	PF00411	Ribosomal protein S11
AL504_RS19840	PF00163	Ribosomal protein S4/S9 N-terminal domain
AL504_RS19840	PF01479	S4 domain
AL504_RS19845	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
AL504_RS19845	PF01000	RNA polymerase Rpb3/RpoA insert domain
AL504_RS19845	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
AL504_RS19850	PF01196	Ribosomal protein L17
AL504_RS19855	PF01230	HIT domain
AL504_RS19860	PF03091	CutA1 divalent ion tolerance protein
AL504_RS19865	PF11412	Disulphide bond corrector protein DsbC
AL504_RS19865	PF02683	Cytochrome C biogenesis protein transmembrane region
AL504_RS19875	PF00490	Delta-aminolevulinic acid dehydratase
AL504_RS19880	PF01926	50S ribosome-binding GTPase
AL504_RS19895	PF01578	Cytochrome C assembly protein
AL504_RS19900	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
AL504_RS19900	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
AL504_RS19905	PF01491	Frataxin-like domain
AL504_RS19910	PF00912	Transglycosylase
AL504_RS19910	PF17092	Penicillin-binding protein OB-like domain
AL504_RS19910	PF00905	Penicillin binding protein transpeptidase domain
AL504_RS19915	PF01202	Shikimate kinase
AL504_RS19920	PF01761	3-dehydroquinate synthase
AL504_RS19925	PF01966	HD domain
AL504_RS19925	PF13286	Phosphohydrolase-associated domain
AL504_RS19930	PF02798	Glutathione S-transferase, N-terminal domain
AL504_RS19930	PF14497	Glutathione S-transferase, C-terminal domain
AL504_RS19935	PF17760	UvrA interaction domain
AL504_RS19935	PF17755	UvrA DNA-binding domain
AL504_RS19940	PF07690	Major Facilitator Superfamily
AL504_RS19945	PF00436	Single-strand binding protein family
AL504_RS19950	PF08241	Methyltransferase domain
AL504_RS19980	PF01274	Malate synthase
AL504_RS19985	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS19985	PF07729	FCD domain
AL504_RS20005	PF01040	UbiA prenyltransferase family
AL504_RS20010	PF00155	Aminotransferase class I and II
AL504_RS20015	PF13185	GAF domain
AL504_RS20020	PF00701	Dihydrodipicolinate synthetase family
AL504_RS20035	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
AL504_RS20035	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
AL504_RS20060	PF01336	OB-fold nucleic acid binding domain
AL504_RS20060	PF00152	tRNA synthetases class II (D, K and N) 
AL504_RS20060	PF02938	GAD domain
AL504_RS20065	PF03372	Endonuclease/Exonuclease/phosphatase family
AL504_RS20070	PF13091	PLD-like domain
AL504_RS20080	PF07690	Major Facilitator Superfamily
AL504_RS20090	PF16363	GDP-mannose 4,6 dehydratase
AL504_RS20095	PF04321	RmlD substrate binding domain
AL504_RS20100	PF00483	Nucleotidyl transferase
AL504_RS20105	PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase
AL504_RS20110	PF00953	Glycosyl transferase family 4
AL504_RS20145	PF00005	ABC transporter
AL504_RS20145	PF08239	Bacterial SH3 domain
AL504_RS20160	PF00202	Aminotransferase class-III
AL504_RS20170	PF02348	Cytidylyltransferase
AL504_RS20180	PF00483	Nucleotidyl transferase
AL504_RS20190	PF08666	SAF domain
AL504_RS20190	PF03102	NeuB family
AL504_RS20195	PF02350	UDP-N-acetylglucosamine 2-epimerase
AL504_RS20200	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
AL504_RS20205	PF16363	GDP-mannose 4,6 dehydratase
AL504_RS20210	PF02719	Polysaccharide biosynthesis protein
AL504_RS20225	PF00534	Glycosyl transferases group 1
AL504_RS20230	PF02397	Bacterial sugar transferase
AL504_RS20235	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
AL504_RS20245	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
AL504_RS20250	PF00132	Bacterial transferase hexapeptide (six repeats)
AL504_RS20255	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
AL504_RS20255	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
AL504_RS20260	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
AL504_RS20265	PF00534	Glycosyl transferases group 1
AL504_RS20265	PF04413	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
AL504_RS20270	PF03309	Type III pantothenate kinase
AL504_RS20280	PF02405	Permease MlaE
AL504_RS20285	PF00005	ABC transporter
AL504_RS20305	PF07943	Penicillin-binding protein 5, C-terminal domain
AL504_RS20305	PF00768	D-alanyl-D-alanine carboxypeptidase
AL504_RS20310	PF01063	Amino-transferase class IV
AL504_RS20315	PF04359	Protein of unknown function (DUF493)
AL504_RS20320	PF03099	Biotin/lipoate A/B protein ligase family
AL504_RS20335	PF04055	Radical SAM superfamily
AL504_RS20335	PF16881	N-terminal domain of lipoyl synthase of Radical_SAM family
AL504_RS20340	PF01923	Cobalamin adenosyltransferase
AL504_RS20350	PF00004	ATPase family associated with various cellular activities (AAA)
AL504_RS20350	PF07724	AAA domain (Cdc48 subfamily)
AL504_RS20355	PF00227	Proteasome subunit
AL504_RS20360	PF01258	Prokaryotic dksA/traR C4-type zinc finger
AL504_RS20365	PF02492	CobW/HypB/UreG, nucleotide-binding domain
AL504_RS20365	PF07683	Cobalamin synthesis protein cobW C-terminal domain
AL504_RS20370	PF01475	Ferric uptake regulator family
AL504_RS20375	PF00005	ABC transporter
AL504_RS20380	PF00950	ABC 3 transport family
AL504_RS20385	PF01297	Zinc-uptake complex component A periplasmic
AL504_RS20400	PF02899	Phage integrase, N-terminal SAM-like domain
AL504_RS20400	PF00589	Phage integrase family
AL504_RS20410	PF01678	Diaminopimelate epimerase
AL504_RS20415	PF03279	Bacterial lipid A biosynthesis acyltransferase
AL504_RS20425	PF02772	S-adenosylmethionine synthetase, central domain
AL504_RS20425	PF02773	S-adenosylmethionine synthetase, C-terminal domain
AL504_RS20425	PF00438	S-adenosylmethionine synthetase, N-terminal domain
AL504_RS20430	PF01425	Amidase
AL504_RS20435	PF00083	Sugar (and other) transporter
AL504_RS20445	PF03466	LysR substrate binding domain
AL504_RS20445	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS20450	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS20455	PF00330	Aconitase family (aconitate hydratase)
AL504_RS20460	PF00694	Aconitase C-terminal domain
AL504_RS20465	PF00561	alpha/beta hydrolase fold
AL504_RS20475	PF00534	Glycosyl transferases group 1
AL504_RS20475	PF13439	Glycosyltransferase Family 4
AL504_RS20480	PF00670	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
AL504_RS20480	PF05221	S-adenosyl-L-homocysteine hydrolase
AL504_RS20485	PF04020	Mycobacterial 4 TMS phage holin, superfamily IV
AL504_RS20490	PF02219	Methylenetetrahydrofolate reductase
AL504_RS20495	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS20505	PF01841	Transglutaminase-like superfamily
AL504_RS20505	PF08379	Bacterial transglutaminase-like N-terminal region
AL504_RS20515	PF14403	Circularly permuted ATP-grasp type 2 
AL504_RS20525	PF01464	Transglycosylase SLT domain
AL504_RS20525	PF14718	Soluble lytic murein transglycosylase L domain
AL504_RS20530	PF01743	Poly A polymerase head domain
AL504_RS20530	PF12627	Probable RNA and SrmB- binding site of polymerase A
AL504_RS20540	PF00271	Helicase conserved C-terminal domain
AL504_RS20540	PF00270	DEAD/DEAH box helicase
AL504_RS20545	PF03167	Uracil DNA glycosylase superfamily
AL504_RS20550	PF17287	POTRA domain
AL504_RS20550	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
AL504_RS20550	PF08479	POTRA domain, ShlB-type
AL504_RS20555	PF05860	haemagglutination activity domain
AL504_RS20555	PF15526	Novel toxin 21
AL504_RS20555	PF04829	Pre-toxin domain with VENN motif
AL504_RS20555	PF05594	Haemagluttinin repeat
AL504_RS20555	PF04829	Pre-toxin domain with VENN motif
AL504_RS20555	PF15526	Novel toxin 21
AL504_RS20555	PF05860	haemagglutination activity domain
AL504_RS20555	PF13332	Hemagglutinin repeat
AL504_RS20555	PF05594	Haemagluttinin repeat
AL504_RS20555	PF13332	Hemagglutinin repeat
AL504_RS20565	PF03070	TENA/THI-4/PQQC family
AL504_RS20565	PF02581	Thiamine monophosphate synthase
AL504_RS20565	PF08543	Phosphomethylpyrimidine kinase
AL504_RS20600	PF04343	Protein of unknown function, DUF488
AL504_RS20605	PF06965	Na+/H+ antiporter 1
AL504_RS20620	PF03976	Polyphosphate kinase 2 (PPK2)
AL504_RS20625	PF00753	Metallo-beta-lactamase superfamily
AL504_RS20635	PF04143	Sulphur transport
AL504_RS20650	PF14535	AMP-binding enzyme C-terminal domain
AL504_RS20650	PF00501	AMP-binding enzyme
AL504_RS20655	PF00005	ABC transporter
AL504_RS20670	PF02653	Branched-chain amino acid transport system / permease component
AL504_RS20675	PF00005	ABC transporter
AL504_RS20675	PF12399	Branched-chain amino acid ATP-binding cassette transporter
AL504_RS20680	PF00501	AMP-binding enzyme
AL504_RS20690	PF01047	MarR family
AL504_RS20695	PF02566	OsmC-like protein
AL504_RS20705	PF00005	ABC transporter
AL504_RS20710	PF00005	ABC transporter
AL504_RS20710	PF12399	Branched-chain amino acid ATP-binding cassette transporter
AL504_RS20720	PF13458	Periplasmic binding protein
AL504_RS20725	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS20725	PF03466	LysR substrate binding domain
AL504_RS20735	PF01810	LysE type translocator
AL504_RS20740	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS20740	PF03466	LysR substrate binding domain
AL504_RS20750	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
AL504_RS20750	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AL504_RS20755	PF03372	Endonuclease/Exonuclease/phosphatase family
AL504_RS20760	PF00156	Phosphoribosyl transferase domain
AL504_RS20770	PF02637	GatB domain
AL504_RS20770	PF02934	GatB/GatE catalytic domain
AL504_RS20775	PF01425	Amidase
AL504_RS20780	PF02686	Glu-tRNAGln amidotransferase C subunit
AL504_RS20790	PF04085	rod shape-determining protein MreC
AL504_RS20800	PF00905	Penicillin binding protein transpeptidase domain
AL504_RS20800	PF03717	Penicillin-binding Protein dimerisation domain
AL504_RS20805	PF01098	Cell cycle protein
AL504_RS20815	PF02615	Malate/L-lactate dehydrogenase
AL504_RS20820	PF00939	Sodium:sulfate symporter transmembrane region
AL504_RS20825	PF00440	Bacterial regulatory proteins, tetR family
AL504_RS20835	PF00696	Amino acid kinase family
AL504_RS20840	PF03180	NLPA lipoprotein
AL504_RS20845	PF00578	AhpC/TSA family
AL504_RS20850	PF04972	BON domain
AL504_RS20855	PF13580	SIS domain
AL504_RS20860	PF02021	Uncharacterised protein family UPF0102
AL504_RS20865	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
AL504_RS20870	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
AL504_RS20870	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
AL504_RS20875	PF05036	Sporulation related domain
AL504_RS20875	PF03330	Lytic transglycolase
AL504_RS20880	PF03668	P-loop ATPase protein family
AL504_RS20890	PF00034	Cytochrome c
AL504_RS20890	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
AL504_RS20895	PF00155	Aminotransferase class I and II
AL504_RS20895	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS20900	PF02603	HPr Serine kinase N terminus
AL504_RS20900	PF07475	HPr Serine kinase C-terminal domain
AL504_RS20905	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL504_RS20910	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
AL504_RS20915	PF00005	ABC transporter
AL504_RS20935	PF00571	CBS domain
AL504_RS20935	PF01380	SIS domain
AL504_RS20940	PF02222	ATP-grasp domain
AL504_RS20950	PF01654	Cytochrome bd terminal oxidase subunit I
AL504_RS20955	PF02322	Cytochrome bd terminal oxidase subunit II
AL504_RS20960	PF00005	ABC transporter
AL504_RS20960	PF00664	ABC transporter transmembrane region
AL504_RS20965	PF00005	ABC transporter
AL504_RS20965	PF00664	ABC transporter transmembrane region
AL504_RS20970	PF00156	Phosphoribosyl transferase domain
AL504_RS20975	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS20975	PF03466	LysR substrate binding domain
AL504_RS20985	PF13609	Gram-negative porin
AL504_RS20990	PF00291	Pyridoxal-phosphate dependent enzyme
AL504_RS20990	PF00585	C-terminal regulatory domain of Threonine dehydratase
AL504_RS21010	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS21015	PF01168	Alanine racemase, N-terminal domain
AL504_RS21020	PF00155	Aminotransferase class I and II
AL504_RS21025	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL504_RS21035	PF00682	HMGL-like
AL504_RS21040	PF02481	DNA recombination-mediator protein A
AL504_RS21040	PF17782	DprA winged helix domain
AL504_RS21045	PF01327	Polypeptide deformylase
AL504_RS21050	PF02911	Formyl transferase, C-terminal domain
AL504_RS21050	PF00551	Formyl transferase
AL504_RS21060	PF13419	Haloacid dehalogenase-like hydrolase
AL504_RS21070	PF03641	Possible lysine decarboxylase
AL504_RS21080	PF01638	HxlR-like helix-turn-helix
AL504_RS21085	PF00893	Small Multidrug Resistance protein
AL504_RS21090	PF00919	Uncharacterized protein family UPF0004
AL504_RS21090	PF04055	Radical SAM superfamily
AL504_RS21090	PF18693	TRAM domain
AL504_RS21095	PF01810	LysE type translocator
AL504_RS21100	PF01029	NusB family
AL504_RS21100	PF01189	16S rRNA methyltransferase RsmB/F
AL504_RS21110	PF00672	HAMP domain
AL504_RS21110	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS21110	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS21110	PF00989	PAS fold
AL504_RS21115	PF00158	Sigma-54 interaction domain
AL504_RS21115	PF00072	Response regulator receiver domain
AL504_RS21115	PF02954	Bacterial regulatory protein, Fis family
AL504_RS21120	PF02254	TrkA-N domain
AL504_RS21120	PF02080	TrkA-C domain
AL504_RS21125	PF02386	Cation transport protein
AL504_RS21130	PF04107	Glutamate-cysteine ligase family 2(GCS2)
AL504_RS21135	PF08241	Methyltransferase domain
AL504_RS21145	PF00588	SpoU rRNA Methylase family
AL504_RS21150	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS21155	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
AL504_RS21155	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
AL504_RS21160	PF02556	Preprotein translocase subunit SecB
AL504_RS21165	PF00462	Glutaredoxin
AL504_RS21170	PF17773	UPF0176 acylphosphatase like domain
AL504_RS21170	PF12368	Rhodanase C-terminal
AL504_RS21170	PF00581	Rhodanese-like domain
AL504_RS21175	PF00300	Histidine phosphatase superfamily (branch 1)
AL504_RS21180	PF01551	Peptidase family M23
AL504_RS21185	PF13180	PDZ domain
AL504_RS21185	PF03572	Peptidase family S41
AL504_RS21190	PF00899	ThiF family
AL504_RS21195	PF00563	EAL domain
AL504_RS21195	PF00990	Diguanylate cyclase, GGDEF domain
AL504_RS21195	PF13188	PAS domain
AL504_RS21195	PF03707	Bacterial signalling protein N terminal repeat
AL504_RS21200	PF07729	FCD domain
AL504_RS21200	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS21205	PF02913	FAD linked oxidases, C-terminal domain
AL504_RS21205	PF01565	FAD binding domain 
AL504_RS21210	PF01964	Radical SAM ThiC family
AL504_RS21210	PF13667	ThiC-associated domain 
AL504_RS21215	PF02355	Protein export membrane protein
AL504_RS21215	PF07549	SecD/SecF GG Motif
AL504_RS21230	PF00696	Amino acid kinase family
AL504_RS21230	PF01472	PUA domain
AL504_RS21235	PF01018	GTP1/OBG
AL504_RS21235	PF01926	50S ribosome-binding GTPase
AL504_RS21240	PF01016	Ribosomal L27 protein
AL504_RS21245	PF00829	Ribosomal prokaryotic L21 protein
AL504_RS21250	PF00348	Polyprenyl synthetase
AL504_RS21265	PF02423	Ornithine cyclodeaminase/mu-crystallin family
AL504_RS21275	PF00221	Aromatic amino acid lyase
AL504_RS21280	PF00795	Carbon-nitrogen hydrolase
AL504_RS21295	PF00107	Zinc-binding dehydrogenase
AL504_RS21295	PF08240	Alcohol dehydrogenase GroES-like domain
AL504_RS21315	PF12697	Alpha/beta hydrolase family
AL504_RS21340	PF00596	Class II Aldolase and Adducin N-terminal domain
AL504_RS21345	PF01261	Xylose isomerase-like TIM barrel
AL504_RS21350	PF01370	NAD dependent epimerase/dehydratase family
AL504_RS21355	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AL504_RS21355	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
AL504_RS21360	PF17042	Nucleotide-binding C-terminal domain
AL504_RS21360	PF07005	Sugar-binding N-terminal domain
AL504_RS21365	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS21365	PF07729	FCD domain
AL504_RS21370	PF03466	LysR substrate binding domain
AL504_RS21370	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS21375	PF07690	Major Facilitator Superfamily
AL504_RS21385	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS21385	PF00593	TonB dependent receptor
AL504_RS21390	PF01261	Xylose isomerase-like TIM barrel
AL504_RS21395	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS21400	PF00892	EamA-like transporter family
AL504_RS21410	PF01037	Lrp/AsnC ligand binding domain
AL504_RS21415	PF01810	LysE type translocator
AL504_RS21425	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
AL504_RS21425	PF01488	Shikimate / quinate 5-dehydrogenase
AL504_RS21425	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
AL504_RS21430	PF03462	PCRF domain
AL504_RS21430	PF00472	RF-1 domain
AL504_RS21435	PF05175	Methyltransferase small domain
AL504_RS21435	PF17827	PrmC N-terminal domain
AL504_RS21440	PF00462	Glutaredoxin
AL504_RS21445	PF02441	Flavoprotein
AL504_RS21455	PF03180	NLPA lipoprotein
AL504_RS21460	PF03079	ARD/ARD' family
AL504_RS21475	PF13193	AMP-binding enzyme C-terminal domain
AL504_RS21475	PF00501	AMP-binding enzyme
AL504_RS21480	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS21495	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
AL504_RS21495	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
AL504_RS21500	PF07690	Major Facilitator Superfamily
AL504_RS21515	PF03466	LysR substrate binding domain
AL504_RS21515	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS21530	PF13417	Glutathione S-transferase, N-terminal domain
AL504_RS21530	PF00043	Glutathione S-transferase, C-terminal domain
AL504_RS21535	PF00890	FAD binding domain
AL504_RS21550	PF00005	ABC transporter
AL504_RS21555	PF12399	Branched-chain amino acid ATP-binding cassette transporter
AL504_RS21555	PF00005	ABC transporter
AL504_RS21560	PF11862	Domain of unknown function (DUF3382)
AL504_RS21560	PF02653	Branched-chain amino acid transport system / permease component
AL504_RS21565	PF02653	Branched-chain amino acid transport system / permease component
AL504_RS21580	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS21580	PF07729	FCD domain
AL504_RS21585	PF00484	Carbonic anhydrase
AL504_RS21605	PF12146	Serine aminopeptidase, S33
AL504_RS21615	PF02426	Muconolactone delta-isomerase
AL504_RS21620	PF01144	Coenzyme A transferase
AL504_RS21625	PF01144	Coenzyme A transferase
AL504_RS21630	PF01614	Bacterial transcriptional regulator
AL504_RS21630	PF09339	IclR helix-turn-helix domain
AL504_RS21640	PF02667	Short chain fatty acid transporter
AL504_RS21645	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
AL504_RS21645	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
AL504_RS21650	PF00311	Phosphoenolpyruvate carboxylase
AL504_RS21655	PF06508	Queuosine biosynthesis protein QueC
AL504_RS21675	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS21675	PF03466	LysR substrate binding domain
AL504_RS21680	PF00682	HMGL-like
AL504_RS21680	PF08502	LeuA allosteric (dimerisation) domain
AL504_RS21695	PF00920	Dehydratase family
AL504_RS21700	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS21700	PF03466	LysR substrate binding domain
AL504_RS21705	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AL504_RS21705	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL504_RS21710	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
AL504_RS21710	PF02817	e3 binding domain
AL504_RS21710	PF00364	Biotin-requiring enzyme
AL504_RS21720	PF00676	Dehydrogenase E1 component
AL504_RS21730	PF00005	ABC transporter
AL504_RS21735	PF00005	ABC transporter
AL504_RS21735	PF12399	Branched-chain amino acid ATP-binding cassette transporter
AL504_RS21745	PF02653	Branched-chain amino acid transport system / permease component
AL504_RS21750	PF13458	Periplasmic binding protein
AL504_RS21765	PF07729	FCD domain
AL504_RS21765	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS21775	PF06941	5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
AL504_RS21785	PF02321	Outer membrane efflux protein
AL504_RS21790	PF00873	AcrB/AcrD/AcrF family
AL504_RS21795	PF13533	Biotin-lipoyl like
AL504_RS21800	PF03466	LysR substrate binding domain
AL504_RS21800	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS21805	PF01594	AI-2E family transporter
AL504_RS21815	PF07690	Major Facilitator Superfamily
AL504_RS21830	PF03551	Transcriptional regulator PadR-like family
AL504_RS21835	PF04954	Siderophore-interacting protein
AL504_RS21835	PF08021	Siderophore-interacting FAD-binding domain
AL504_RS21840	PF03466	LysR substrate binding domain
AL504_RS21840	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS21860	PF04542	Sigma-70 region 2 
AL504_RS21860	PF08281	Sigma-70, region 4
AL504_RS21870	PF00072	Response regulator receiver domain
AL504_RS21870	PF02954	Bacterial regulatory protein, Fis family
AL504_RS21870	PF00158	Sigma-54 interaction domain
AL504_RS21985	PF03466	LysR substrate binding domain
AL504_RS21985	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS22000	PF05853	beta-keto acid cleavage enzyme
AL504_RS22005	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
AL504_RS22005	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
AL504_RS22010	PF02653	Branched-chain amino acid transport system / permease component
AL504_RS22020	PF00005	ABC transporter
AL504_RS22030	PF05698	Bacterial trigger factor protein (TF) C-terminus
AL504_RS22035	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL504_RS22060	PF00860	Permease family
AL504_RS22070	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS22070	PF00183	Hsp90 protein
AL504_RS22075	PF01381	Helix-turn-helix
AL504_RS22080	PF07804	HipA-like C-terminal domain
AL504_RS22080	PF13657	HipA N-terminal domain
AL504_RS22085	PF07690	Major Facilitator Superfamily
AL504_RS22090	PF00593	TonB dependent receptor
AL504_RS22090	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS22105	PF00005	ABC transporter
AL504_RS22110	PF07690	Major Facilitator Superfamily
AL504_RS22115	PF13378	Enolase C-terminal domain-like
AL504_RS22115	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
AL504_RS22120	PF01081	KDPG and KHG aldolase
AL504_RS22130	PF01614	Bacterial transcriptional regulator
AL504_RS22130	PF09339	IclR helix-turn-helix domain
AL504_RS22150	PF13657	HipA N-terminal domain
AL504_RS22150	PF07804	HipA-like C-terminal domain
AL504_RS22165	PF00664	ABC transporter transmembrane region
AL504_RS22165	PF00005	ABC transporter
AL504_RS22170	PF00529	HlyD membrane-fusion protein of T1SS
AL504_RS22175	PF02321	Outer membrane efflux protein
AL504_RS22180	PF03466	LysR substrate binding domain
AL504_RS22180	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS22185	PF00171	Aldehyde dehydrogenase family
AL504_RS22190	PF01370	NAD dependent epimerase/dehydratase family
AL504_RS22205	PF13417	Glutathione S-transferase, N-terminal domain
AL504_RS22205	PF00043	Glutathione S-transferase, C-terminal domain
AL504_RS22210	PF01510	N-acetylmuramoyl-L-alanine amidase
AL504_RS22220	PF01578	Cytochrome C assembly protein
AL504_RS22225	PF02978	Signal peptide binding domain
AL504_RS22225	PF02881	SRP54-type protein, helical bundle domain
AL504_RS22225	PF00448	SRP54-type protein, GTPase domain
AL504_RS22230	PF01476	LysM domain
AL504_RS22230	PF04972	BON domain
AL504_RS22240	PF13333	Integrase core domain
AL504_RS22240	PF00665	Integrase core domain
AL504_RS22240	PF13276	HTH-like domain
AL504_RS22245	PF05690	Thiazole biosynthesis protein ThiG
AL504_RS22245	PF02597	ThiS family
AL504_RS22250	PF00561	alpha/beta hydrolase fold
AL504_RS22255	PF02390	Putative methyltransferase 
AL504_RS22260	PF03466	LysR substrate binding domain
AL504_RS22260	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS22265	PF02515	CoA-transferase family III
AL504_RS22270	PF00682	HMGL-like
AL504_RS22275	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS22290	PF01425	Amidase
AL504_RS22300	PF04055	Radical SAM superfamily
AL504_RS22320	PF05853	beta-keto acid cleavage enzyme
AL504_RS22335	PF07690	Major Facilitator Superfamily
AL504_RS22335	PF00083	Sugar (and other) transporter
AL504_RS22340	PF13417	Glutathione S-transferase, N-terminal domain
AL504_RS22365	PF01494	FAD binding domain
AL504_RS22380	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS22380	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS22380	PF00672	HAMP domain
AL504_RS22390	PF00072	Response regulator receiver domain
AL504_RS22390	PF01627	Hpt domain
AL504_RS22390	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS22390	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS22395	PF00072	Response regulator receiver domain
AL504_RS22395	PF00196	Bacterial regulatory proteins, luxR family
AL504_RS22400	PF14698	Argininosuccinate lyase C-terminal
AL504_RS22400	PF00206	Lyase
AL504_RS22410	PF04303	PrpF protein
AL504_RS22415	PF00330	Aconitase family (aconitate hydratase)
AL504_RS22415	PF00694	Aconitase C-terminal domain
AL504_RS22425	PF00444	Ribosomal protein L36
AL504_RS22435	PF01926	50S ribosome-binding GTPase
AL504_RS22435	PF12631	MnmE helical domain
AL504_RS22435	PF10396	GTP-binding protein TrmE N-terminus
AL504_RS22450	PF05426	Alginate lyase
AL504_RS22470	PF07687	Peptidase dimerisation domain
AL504_RS22470	PF01546	Peptidase family M20/M25/M40
AL504_RS22475	PF01979	Amidohydrolase family
AL504_RS22480	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS22480	PF03466	LysR substrate binding domain
AL504_RS22490	PF01175	Urocanase Rossmann-like domain
AL504_RS22490	PF17392	Urocanase C-terminal domain
AL504_RS22490	PF17391	Urocanase N-terminal domain
AL504_RS22495	PF07690	Major Facilitator Superfamily
AL504_RS22500	PF12706	Beta-lactamase superfamily domain
AL504_RS22505	PF00221	Aromatic amino acid lyase
AL504_RS22510	PF02798	Glutathione S-transferase, N-terminal domain
AL504_RS22510	PF00043	Glutathione S-transferase, C-terminal domain
AL504_RS22515	PF00034	Cytochrome c
AL504_RS22515	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
AL504_RS22520	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
AL504_RS22525	PF03466	LysR substrate binding domain
AL504_RS22525	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS22530	PF01266	FAD dependent oxidoreductase
AL504_RS22540	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS22555	PF00155	Aminotransferase class I and II
AL504_RS22555	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS22560	PF02322	Cytochrome bd terminal oxidase subunit II
AL504_RS22565	PF01654	Cytochrome bd terminal oxidase subunit I
AL504_RS22570	PF01361	Tautomerase enzyme
AL504_RS22580	PF03466	LysR substrate binding domain
AL504_RS22580	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS22585	PF00892	EamA-like transporter family
AL504_RS22590	PF03466	LysR substrate binding domain
AL504_RS22590	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS22595	PF00106	short chain dehydrogenase
AL504_RS22615	PF13533	Biotin-lipoyl like
AL504_RS22620	PF02321	Outer membrane efflux protein
AL504_RS22620	PF08139	Prokaryotic membrane lipoprotein lipid attachment site
AL504_RS22625	PF00561	alpha/beta hydrolase fold
AL504_RS22625	PF07167	Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus
AL504_RS22630	PF00440	Bacterial regulatory proteins, tetR family
AL504_RS22635	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS22635	PF00593	TonB dependent receptor
AL504_RS22645	PF08281	Sigma-70, region 4
AL504_RS22645	PF04542	Sigma-70 region 2 
AL504_RS22670	PF13698	Domain of unknown function (DUF4156)
AL504_RS22675	PF07885	Ion channel
AL504_RS22675	PF02254	TrkA-N domain
AL504_RS22680	PF00486	Transcriptional regulatory protein, C terminal
AL504_RS22680	PF00072	Response regulator receiver domain
AL504_RS22690	PF01757	Acyltransferase family
AL504_RS22705	PF00581	Rhodanese-like domain
AL504_RS22705	PF17773	UPF0176 acylphosphatase like domain
AL504_RS22710	PF01588	Putative tRNA binding domain
AL504_RS22710	PF09334	tRNA synthetases class I (M)
AL504_RS22720	PF10609	NUBPL iron-transfer P-loop NTPase
AL504_RS22735	PF00692	dUTPase
AL504_RS22745	PF08448	PAS fold
AL504_RS22745	PF00990	Diguanylate cyclase, GGDEF domain
AL504_RS22750	PF00583	Acetyltransferase (GNAT) family
AL504_RS22760	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
AL504_RS22760	PF01276	Orn/Lys/Arg decarboxylase, major domain
AL504_RS22760	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
AL504_RS22770	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
AL504_RS22770	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
AL504_RS22775	PF02535	ZIP Zinc transporter
AL504_RS22780	PF01571	Aminomethyltransferase folate-binding domain
AL504_RS22780	PF08669	Glycine cleavage T-protein C-terminal barrel domain
AL504_RS22785	PF01597	Glycine cleavage H-protein
AL504_RS22790	PF02347	Glycine cleavage system P-protein
AL504_RS22805	PF01425	Amidase
AL504_RS22810	PF00005	ABC transporter
AL504_RS22810	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL504_RS22815	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS22820	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS22835	PF00171	Aldehyde dehydrogenase family
AL504_RS22840	PF00202	Aminotransferase class-III
AL504_RS22845	PF00155	Aminotransferase class I and II
AL504_RS22850	PF00186	Dihydrofolate reductase
AL504_RS22855	PF00563	EAL domain
AL504_RS22855	PF00990	Diguanylate cyclase, GGDEF domain
AL504_RS22855	PF03707	Bacterial signalling protein N terminal repeat
AL504_RS22860	PF00303	Thymidylate synthase
AL504_RS22875	PF00953	Glycosyl transferase family 4
AL504_RS22880	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
AL504_RS22880	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
AL504_RS22880	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
AL504_RS22885	PF01370	NAD dependent epimerase/dehydratase family
AL504_RS22890	PF03023	Lipid II flippase MurJ
AL504_RS22895	PF00534	Glycosyl transferases group 1
AL504_RS22895	PF13439	Glycosyltransferase Family 4
AL504_RS22900	PF13537	Glutamine amidotransferase domain
AL504_RS22900	PF00733	Asparagine synthase
AL504_RS22905	PF13439	Glycosyltransferase Family 4
AL504_RS22905	PF00534	Glycosyl transferases group 1
AL504_RS22915	PF13477	Glycosyl transferase 4-like
AL504_RS22915	PF00534	Glycosyl transferases group 1
AL504_RS22925	PF00342	Phosphoglucose isomerase
AL504_RS22930	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AL504_RS22930	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AL504_RS22930	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AL504_RS22930	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AL504_RS22940	PF01565	FAD binding domain 
AL504_RS22940	PF02913	FAD linked oxidases, C-terminal domain
AL504_RS22945	PF00486	Transcriptional regulatory protein, C terminal
AL504_RS22945	PF00072	Response regulator receiver domain
AL504_RS22950	PF00672	HAMP domain
AL504_RS22950	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS22950	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS22960	PF04290	Tripartite ATP-independent periplasmic transporters, DctQ component
AL504_RS22960	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
AL504_RS22970	PF03480	Bacterial extracellular solute-binding protein, family 7
AL504_RS22975	PF01370	NAD dependent epimerase/dehydratase family
AL504_RS22980	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS22980	PF07729	FCD domain
AL504_RS22985	PF00884	Sulfatase
AL504_RS22990	PF01553	Acyltransferase
AL504_RS23000	PF04209	homogentisate 1,2-dioxygenase
AL504_RS23005	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS23005	PF03466	LysR substrate binding domain
AL504_RS23015	PF01494	FAD binding domain
AL504_RS23025	PF06827	Zinc finger found in FPG and IleRS
AL504_RS23025	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
AL504_RS23025	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
AL504_RS23035	PF03550	Outer membrane lipoprotein LolB
AL504_RS23040	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL504_RS23040	PF02203	Tar ligand binding domain homologue
AL504_RS23040	PF00672	HAMP domain
AL504_RS23045	PF08544	GHMP kinases C terminal 
AL504_RS23045	PF00288	GHMP kinases N terminal domain
AL504_RS23055	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
AL504_RS23055	PF14572	Phosphoribosyl synthetase-associated domain
AL504_RS23060	PF01386	Ribosomal L25p family
AL504_RS23060	PF14693	Ribosomal protein TL5, C-terminal domain
AL504_RS23065	PF01195	Peptidyl-tRNA hydrolase
AL504_RS23075	PF01926	50S ribosome-binding GTPase
AL504_RS23075	PF06071	Protein of unknown function (DUF933)
AL504_RS23080	PF17761	DUF1016 N-terminal domain
AL504_RS23080	PF06250	YhcG PDDEXK nuclease domain
AL504_RS23085	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS23085	PF00593	TonB dependent receptor
AL504_RS23090	PF12848	ABC transporter
AL504_RS23090	PF00005	ABC transporter
AL504_RS23105	PF07690	Major Facilitator Superfamily
AL504_RS23120	PF03594	Benzoate membrane transport protein
AL504_RS23125	PF00037	4Fe-4S binding domain
AL504_RS23130	PF01467	Cytidylyltransferase-like
AL504_RS23140	PF00448	SRP54-type protein, GTPase domain
AL504_RS23140	PF02881	SRP54-type protein, helical bundle domain
AL504_RS23155	PF12951	Passenger-associated-transport-repeat
AL504_RS23160	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS23165	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS23170	PF00005	ABC transporter
AL504_RS23190	PF00925	GTP cyclohydrolase II
AL504_RS23190	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
AL504_RS23195	PF00885	6,7-dimethyl-8-ribityllumazine synthase
AL504_RS23200	PF01029	NusB family
AL504_RS23205	PF02769	AIR synthase related protein, C-terminal domain
AL504_RS23205	PF00586	AIR synthase related protein, N-terminal domain
AL504_RS23215	PF00994	Probable molybdopterin binding domain
AL504_RS23215	PF18146	Damage-inducible protein CinA KH domain
AL504_RS23215	PF02464	Competence-damaged protein
AL504_RS23220	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
AL504_RS23225	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL504_RS23230	PF01219	Prokaryotic diacylglycerol kinase
AL504_RS23235	PF08125	Mannitol dehydrogenase C-terminal domain
AL504_RS23235	PF01232	Mannitol dehydrogenase Rossmann domain
AL504_RS23240	PF00005	ABC transporter
AL504_RS23245	PF00005	ABC transporter
AL504_RS23245	PF12399	Branched-chain amino acid ATP-binding cassette transporter
AL504_RS23270	PF06052	3-hydroxyanthranilic acid dioxygenase
AL504_RS23275	PF03466	LysR substrate binding domain
AL504_RS23275	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS23280	PF01042	Endoribonuclease L-PSP
AL504_RS23285	PF00171	Aldehyde dehydrogenase family
AL504_RS23290	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS23290	PF00593	TonB dependent receptor
AL504_RS23305	PF01047	MarR family
AL504_RS23315	PF00118	TCP-1/cpn60 chaperonin family
AL504_RS23320	PF00166	Chaperonin 10 Kd subunit
AL504_RS23330	PF12951	Passenger-associated-transport-repeat
AL504_RS23355	PF00701	Dihydrodipicolinate synthetase family
AL504_RS23375	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS23380	PF00285	Citrate synthase, C-terminal domain
AL504_RS23390	PF00171	Aldehyde dehydrogenase family
AL504_RS23400	PF06719	AraC-type transcriptional regulator N-terminus
AL504_RS23400	PF12833	Helix-turn-helix domain
AL504_RS23410	PF03466	LysR substrate binding domain
AL504_RS23410	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS23425	PF00384	Molybdopterin oxidoreductase
AL504_RS23430	PF00654	Voltage gated chloride channel
AL504_RS23435	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS23435	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS23440	PF00072	Response regulator receiver domain
AL504_RS23440	PF02954	Bacterial regulatory protein, Fis family
AL504_RS23440	PF00158	Sigma-54 interaction domain
AL504_RS23455	PF07690	Major Facilitator Superfamily
AL504_RS23460	PF04940	Sensors of blue-light using FAD
AL504_RS23460	PF00563	EAL domain
AL504_RS23465	PF00106	short chain dehydrogenase
AL504_RS23470	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS23470	PF03466	LysR substrate binding domain
AL504_RS23480	PF08021	Siderophore-interacting FAD-binding domain
AL504_RS23480	PF00664	ABC transporter transmembrane region
AL504_RS23480	PF00005	ABC transporter
AL504_RS23480	PF04954	Siderophore-interacting protein
AL504_RS23485	PF00005	ABC transporter
AL504_RS23490	PF01032	FecCD transport family
AL504_RS23495	PF01032	FecCD transport family
AL504_RS23500	PF00005	ABC transporter
AL504_RS23505	PF01497	Periplasmic binding protein
AL504_RS23510	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS23510	PF00593	TonB dependent receptor
AL504_RS23560	PF07859	alpha/beta hydrolase fold
AL504_RS23580	PF02567	Phenazine biosynthesis-like protein
AL504_RS23585	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS23595	PF01590	GAF domain
AL504_RS23595	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS23595	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS23595	PF08446	PAS fold
AL504_RS23595	PF00360	Phytochrome region
AL504_RS23600	PF01339	CheB methylesterase
AL504_RS23605	PF03705	CheR methyltransferase, all-alpha domain
AL504_RS23605	PF01739	CheR methyltransferase, SAM binding domain
AL504_RS23610	PF00672	HAMP domain
AL504_RS23610	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS23610	PF00072	Response regulator receiver domain
AL504_RS23610	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS23610	PF01627	Hpt domain
AL504_RS23610	PF09984	Uncharacterised signal transduction histidine kinase domain (DUF2222)
AL504_RS23615	PF00072	Response regulator receiver domain
AL504_RS23615	PF00486	Transcriptional regulatory protein, C terminal
AL504_RS23625	PF03466	LysR substrate binding domain
AL504_RS23625	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS23635	PF01568	Molydopterin dinucleotide binding domain
AL504_RS23635	PF00384	Molybdopterin oxidoreductase
AL504_RS23640	PF00581	Rhodanese-like domain
AL504_RS23645	PF02627	Carboxymuconolactone decarboxylase family
AL504_RS23650	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS23655	PF10397	Adenylosuccinate lyase C-terminus
AL504_RS23655	PF00206	Lyase
AL504_RS23660	PF02913	FAD linked oxidases, C-terminal domain
AL504_RS23660	PF01565	FAD binding domain 
AL504_RS23675	PF03572	Peptidase family S41
AL504_RS23675	PF13180	PDZ domain
AL504_RS23690	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS23695	PF12697	Alpha/beta hydrolase family
AL504_RS23705	PF03466	LysR substrate binding domain
AL504_RS23705	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS23710	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS23710	PF03466	LysR substrate binding domain
AL504_RS23720	PF01425	Amidase
AL504_RS23730	PF04542	Sigma-70 region 2 
AL504_RS23730	PF08281	Sigma-70, region 4
AL504_RS23745	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS23745	PF00593	TonB dependent receptor
AL504_RS23745	PF07660	Secretin and TonB N terminus short domain
AL504_RS23750	PF16220	Domain of unknown function (DUF4880)
AL504_RS23750	PF04773	FecR protein
AL504_RS23755	PF04542	Sigma-70 region 2 
AL504_RS23755	PF08281	Sigma-70, region 4
AL504_RS23760	PF03583	Secretory lipase 
AL504_RS23775	PF03466	LysR substrate binding domain
AL504_RS23775	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS23780	PF03466	LysR substrate binding domain
AL504_RS23780	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS23785	PF00155	Aminotransferase class I and II
AL504_RS23795	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS23800	PF07687	Peptidase dimerisation domain
AL504_RS23800	PF01546	Peptidase family M20/M25/M40
AL504_RS23805	PF00892	EamA-like transporter family
AL504_RS23810	PF02515	CoA-transferase family III
AL504_RS23815	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS23820	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL504_RS23820	PF02770	Acyl-CoA dehydrogenase, middle domain
AL504_RS23820	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL504_RS23825	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS23825	PF03466	LysR substrate binding domain
AL504_RS23835	PF02627	Carboxymuconolactone decarboxylase family
AL504_RS23845	PF01593	Flavin containing amine oxidoreductase
AL504_RS23850	PF08240	Alcohol dehydrogenase GroES-like domain
AL504_RS23850	PF00107	Zinc-binding dehydrogenase
AL504_RS23855	PF07690	Major Facilitator Superfamily
AL504_RS23865	PF13098	Thioredoxin-like domain
AL504_RS23880	PF04542	Sigma-70 region 2 
AL504_RS23880	PF08281	Sigma-70, region 4
AL504_RS23890	PF03358	NADPH-dependent FMN reductase
AL504_RS23915	PF00905	Penicillin binding protein transpeptidase domain
AL504_RS23920	PF00768	D-alanyl-D-alanine carboxypeptidase
AL504_RS23930	PF12911	N-terminal TM domain of oligopeptide transport permease C
AL504_RS23930	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS23935	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS23940	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL504_RS23950	PF05378	Hydantoinase/oxoprolinase N-terminal region
AL504_RS23950	PF01968	Hydantoinase/oxoprolinase
AL504_RS23975	PF00593	TonB dependent receptor
AL504_RS23975	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS23975	PF07660	Secretin and TonB N terminus short domain
AL504_RS23985	PF00005	ABC transporter
AL504_RS23985	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL504_RS23990	PF04679	ATP dependent DNA ligase C terminal region        
AL504_RS23990	PF01068	ATP dependent DNA ligase domain
AL504_RS23990	PF04675	DNA ligase N terminus
AL504_RS23995	PF04675	DNA ligase N terminus
AL504_RS23995	PF04679	ATP dependent DNA ligase C terminal region        
AL504_RS23995	PF01068	ATP dependent DNA ligase domain
AL504_RS24000	PF00271	Helicase conserved C-terminal domain
AL504_RS24000	PF08494	DEAD/H associated
AL504_RS24000	PF00270	DEAD/DEAH box helicase
AL504_RS24010	PF00005	ABC transporter
AL504_RS24010	PF00664	ABC transporter transmembrane region
AL504_RS24015	PF04954	Siderophore-interacting protein
AL504_RS24015	PF08021	Siderophore-interacting FAD-binding domain
AL504_RS24015	PF00005	ABC transporter
AL504_RS24015	PF00664	ABC transporter transmembrane region
AL504_RS24025	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS24025	PF00593	TonB dependent receptor
AL504_RS24035	PF02583	Metal-sensitive transcriptional repressor
AL504_RS24060	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS24060	PF00593	TonB dependent receptor
AL504_RS24060	PF07660	Secretin and TonB N terminus short domain
AL504_RS24065	PF04773	FecR protein
AL504_RS24065	PF16220	Domain of unknown function (DUF4880)
AL504_RS24075	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AL504_RS24075	PF00205	Thiamine pyrophosphate enzyme, central domain
AL504_RS24075	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AL504_RS24090	PF01047	MarR family
AL504_RS24095	PF01494	FAD binding domain
AL504_RS24115	PF00155	Aminotransferase class I and II
AL504_RS24115	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS24120	PF00596	Class II Aldolase and Adducin N-terminal domain
AL504_RS24130	PF03466	LysR substrate binding domain
AL504_RS24130	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS24135	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AL504_RS24135	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL504_RS24135	PF01842	ACT domain
AL504_RS24140	PF07690	Major Facilitator Superfamily
AL504_RS24145	PF00581	Rhodanese-like domain
AL504_RS24150	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
AL504_RS24150	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AL504_RS24155	PF13673	Acetyltransferase (GNAT) domain
AL504_RS24160	PF12697	Alpha/beta hydrolase family
AL504_RS24165	PF00384	Molybdopterin oxidoreductase
AL504_RS24165	PF01568	Molydopterin dinucleotide binding domain
AL504_RS24170	PF00701	Dihydrodipicolinate synthetase family
AL504_RS24175	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS24190	PF07690	Major Facilitator Superfamily
AL504_RS24195	PF00574	Clp protease
AL504_RS24205	PF01022	Bacterial regulatory protein, arsR family
AL504_RS24210	PF00990	Diguanylate cyclase, GGDEF domain
AL504_RS24210	PF13185	GAF domain
AL504_RS24215	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL504_RS24215	PF00672	HAMP domain
AL504_RS24215	PF02203	Tar ligand binding domain homologue
AL504_RS24225	PF01970	Tripartite tricarboxylate transporter TctA family
AL504_RS24240	PF13378	Enolase C-terminal domain-like
AL504_RS24245	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS24245	PF03466	LysR substrate binding domain
AL504_RS24250	PF00583	Acetyltransferase (GNAT) family
AL504_RS24260	PF01253	Translation initiation factor SUI1
AL504_RS24265	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS24265	PF03466	LysR substrate binding domain
AL504_RS24270	PF00248	Aldo/keto reductase family
AL504_RS24280	PF00248	Aldo/keto reductase family
AL504_RS24290	PF01568	Molydopterin dinucleotide binding domain
AL504_RS24290	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AL504_RS24290	PF00384	Molybdopterin oxidoreductase
AL504_RS24295	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
AL504_RS24295	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL504_RS24295	PF04324	BFD-like [2Fe-2S] binding domain
AL504_RS24295	PF13806	Rieske-like [2Fe-2S] domain
AL504_RS24295	PF18267	Rubredoxin NAD+ reductase C-terminal domain
AL504_RS24295	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
AL504_RS24300	PF13806	Rieske-like [2Fe-2S] domain
AL504_RS24300	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL504_RS24300	PF18267	Rubredoxin NAD+ reductase C-terminal domain
AL504_RS24300	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
AL504_RS24300	PF04324	BFD-like [2Fe-2S] binding domain
AL504_RS24300	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
AL504_RS24305	PF08376	Nitrate and nitrite sensing
AL504_RS24305	PF03861	ANTAR domain
AL504_RS24320	PF05506	Domain of unknown function (DUF756)
AL504_RS24320	PF04185	Phosphoesterase family
AL504_RS24330	PF00196	Bacterial regulatory proteins, luxR family
AL504_RS24355	PF02798	Glutathione S-transferase, N-terminal domain
AL504_RS24365	PF00581	Rhodanese-like domain
AL504_RS24380	PF13609	Gram-negative porin
AL504_RS24385	PF13609	Gram-negative porin
AL504_RS24395	PF03626	Prokaryotic Cytochrome C oxidase subunit IV 
AL504_RS24400	PF00510	Cytochrome c oxidase subunit III
AL504_RS24405	PF00115	Cytochrome C and Quinol oxidase polypeptide I
AL504_RS24410	PF06481	COX Aromatic Rich Motif
AL504_RS24410	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
AL504_RS24415	PF00083	Sugar (and other) transporter
AL504_RS24415	PF07690	Major Facilitator Superfamily
AL504_RS24425	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL504_RS24430	PF00202	Aminotransferase class-III
AL504_RS24440	PF00850	Histone deacetylase domain
AL504_RS24470	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS24470	PF03466	LysR substrate binding domain
AL504_RS24475	PF03741	Integral membrane protein TerC family
AL504_RS24490	PF02311	AraC-like ligand binding domain
AL504_RS24490	PF12833	Helix-turn-helix domain
AL504_RS24495	PF07690	Major Facilitator Superfamily
AL504_RS24505	PF02868	Thermolysin metallopeptidase, alpha-helical domain
AL504_RS24505	PF01447	Thermolysin metallopeptidase, catalytic domain
AL504_RS24505	PF16485	Protealysin propeptide
AL504_RS24520	PF01145	SPFH domain / Band 7 family
AL504_RS24525	PF02378	Phosphotransferase system, EIIC 
AL504_RS24540	PF16220	Domain of unknown function (DUF4880)
AL504_RS24540	PF04773	FecR protein
AL504_RS24545	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS24545	PF07660	Secretin and TonB N terminus short domain
AL504_RS24545	PF00593	TonB dependent receptor
AL504_RS24550	PF00106	short chain dehydrogenase
AL504_RS24555	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS24555	PF03466	LysR substrate binding domain
AL504_RS24565	PF04773	FecR protein
AL504_RS24565	PF16220	Domain of unknown function (DUF4880)
AL504_RS24570	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS24570	PF07660	Secretin and TonB N terminus short domain
AL504_RS24570	PF00593	TonB dependent receptor
AL504_RS24575	PF04542	Sigma-70 region 2 
AL504_RS24575	PF08281	Sigma-70, region 4
AL504_RS24580	PF16220	Domain of unknown function (DUF4880)
AL504_RS24580	PF04773	FecR protein
AL504_RS24585	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS24585	PF00593	TonB dependent receptor
AL504_RS24595	PF00694	Aconitase C-terminal domain
AL504_RS24595	PF00330	Aconitase family (aconitate hydratase)
AL504_RS24600	PF09859	Oxygenase, catalysing oxidative methylation of damaged DNA
AL504_RS24610	PF13419	Haloacid dehalogenase-like hydrolase
AL504_RS24620	PF02308	MgtC family
AL504_RS24625	PF04209	homogentisate 1,2-dioxygenase
AL504_RS24640	PF03781	Sulfatase-modifying factor enzyme 1
AL504_RS24655	PF13532	2OG-Fe(II) oxygenase superfamily
AL504_RS24660	PF09859	Oxygenase, catalysing oxidative methylation of damaged DNA
AL504_RS24665	PF13091	PLD-like domain
AL504_RS24670	PF01381	Helix-turn-helix
AL504_RS24670	PF07883	Cupin domain
AL504_RS24690	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS24690	PF03466	LysR substrate binding domain
AL504_RS24710	PF03466	LysR substrate binding domain
AL504_RS24710	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS24725	PF00892	EamA-like transporter family
AL504_RS24730	PF02311	AraC-like ligand binding domain
AL504_RS24730	PF12833	Helix-turn-helix domain
AL504_RS24740	PF00390	Malic enzyme, N-terminal domain
AL504_RS24740	PF03949	Malic enzyme, NAD binding domain
AL504_RS24740	PF01515	Phosphate acetyl/butaryl transferase
AL504_RS24755	PF04102	SlyX
AL504_RS24760	PF00593	TonB dependent receptor
AL504_RS24760	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS24765	PF04891	NifQ
AL504_RS24775	PF03626	Prokaryotic Cytochrome C oxidase subunit IV 
AL504_RS24780	PF00510	Cytochrome c oxidase subunit III
AL504_RS24785	PF00115	Cytochrome C and Quinol oxidase polypeptide I
AL504_RS24790	PF06481	COX Aromatic Rich Motif
AL504_RS24790	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
AL504_RS24795	PF00072	Response regulator receiver domain
AL504_RS24800	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS24800	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS24815	PF02630	SCO1/SenC
AL504_RS24840	PF00005	ABC transporter
AL504_RS24845	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS24850	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL504_RS24855	PF03576	Peptidase family S58 
AL504_RS24860	PF03006	Haemolysin-III related
AL504_RS24865	PF01037	Lrp/AsnC ligand binding domain
AL504_RS24870	PF00266	Aminotransferase class-V
AL504_RS24875	PF00324	Amino acid permease
AL504_RS24880	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS24880	PF03466	LysR substrate binding domain
AL504_RS24890	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS24890	PF03466	LysR substrate binding domain
AL504_RS24905	PF13280	WYL domain
AL504_RS24905	PF08279	HTH domain
AL504_RS24915	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS24935	PF08281	Sigma-70, region 4
AL504_RS24935	PF04542	Sigma-70 region 2 
AL504_RS24940	PF04773	FecR protein
AL504_RS24940	PF16220	Domain of unknown function (DUF4880)
AL504_RS24950	PF05171	Haemin-degrading HemS.ChuX domain
AL504_RS24955	PF01497	Periplasmic binding protein
AL504_RS24960	PF01032	FecCD transport family
AL504_RS24965	PF00005	ABC transporter
AL504_RS24970	PF04461	Protein of unknown function (DUF520)
AL504_RS24975	PF00730	HhH-GPD superfamily base excision DNA repair protein
AL504_RS24975	PF02805	Metal binding domain of Ada
AL504_RS24975	PF06029	AlkA N-terminal domain
AL504_RS24975	PF12833	Helix-turn-helix domain
AL504_RS24980	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
AL504_RS24980	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
AL504_RS24985	PF01569	PAP2 superfamily
AL504_RS25000	PF00196	Bacterial regulatory proteins, luxR family
AL504_RS25000	PF00072	Response regulator receiver domain
AL504_RS25005	PF03960	ArsC family
AL504_RS25015	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS25015	PF00593	TonB dependent receptor
AL504_RS25025	PF00005	ABC transporter
AL504_RS25030	PF12399	Branched-chain amino acid ATP-binding cassette transporter
AL504_RS25030	PF00005	ABC transporter
AL504_RS25050	PF01425	Amidase
AL504_RS25055	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AL504_RS25055	PF02785	Biotin carboxylase C-terminal domain
AL504_RS25055	PF00364	Biotin-requiring enzyme
AL504_RS25055	PF02785	Biotin carboxylase C-terminal domain
AL504_RS25055	PF00289	Biotin carboxylase, N-terminal domain
AL504_RS25055	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AL504_RS25055	PF00289	Biotin carboxylase, N-terminal domain
AL504_RS25055	PF00364	Biotin-requiring enzyme
AL504_RS25070	PF04542	Sigma-70 region 2 
AL504_RS25070	PF08281	Sigma-70, region 4
AL504_RS25080	PF00583	Acetyltransferase (GNAT) family
AL504_RS25085	PF03466	LysR substrate binding domain
AL504_RS25085	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS25090	PF04303	PrpF protein
AL504_RS25095	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS25115	PF00127	Copper binding proteins, plastocyanin/azurin family
AL504_RS25120	PF07995	Glucose / Sorbosone dehydrogenase
AL504_RS25140	PF00072	Response regulator receiver domain
AL504_RS25140	PF00486	Transcriptional regulatory protein, C terminal
AL504_RS25145	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS25150	PF00582	Universal stress protein family
AL504_RS25155	PF00582	Universal stress protein family
AL504_RS25160	PF01177	Asp/Glu/Hydantoin racemase
AL504_RS25165	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS25165	PF03466	LysR substrate binding domain
AL504_RS25190	PF07690	Major Facilitator Superfamily
AL504_RS25200	PF02634	FdhD/NarQ family
AL504_RS25205	PF12838	4Fe-4S dicluster domain
AL504_RS25205	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AL504_RS25205	PF01568	Molydopterin dinucleotide binding domain
AL504_RS25205	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AL504_RS25205	PF00384	Molybdopterin oxidoreductase
AL504_RS25210	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
AL504_RS25210	PF00037	4Fe-4S binding domain
AL504_RS25210	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AL504_RS25225	PF06463	Molybdenum Cofactor Synthesis C
AL504_RS25225	PF04055	Radical SAM superfamily
AL504_RS25230	PF12804	MobA-like NTP transferase domain
AL504_RS25240	PF00994	Probable molybdopterin binding domain
AL504_RS25245	PF02391	MoaE protein
AL504_RS25255	PF01967	MoaC family
AL504_RS25265	PF01738	Dienelactone hydrolase family
AL504_RS25275	PF08534	Redoxin
AL504_RS25290	PF04055	Radical SAM superfamily
AL504_RS25290	PF06968	Biotin and Thiamin Synthesis associated domain
AL504_RS25295	PF00196	Bacterial regulatory proteins, luxR family
AL504_RS25330	PF00248	Aldo/keto reductase family
AL504_RS25335	PF00795	Carbon-nitrogen hydrolase
AL504_RS25340	PF03471	Transporter associated domain
AL504_RS25340	PF00571	CBS domain
AL504_RS25345	PF02130	Uncharacterized protein family UPF0054
AL504_RS25350	PF02562	PhoH-like protein
AL504_RS25355	PF01938	TRAM domain
AL504_RS25355	PF00919	Uncharacterized protein family UPF0004
AL504_RS25355	PF04055	Radical SAM superfamily
AL504_RS25365	PF01411	tRNA synthetases class II (A)
AL504_RS25365	PF02272	DHHA1 domain
AL504_RS25365	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
AL504_RS25385	PF02355	Protein export membrane protein
AL504_RS25385	PF07549	SecD/SecF GG Motif
AL504_RS25390	PF07549	SecD/SecF GG Motif
AL504_RS25390	PF02355	Protein export membrane protein
AL504_RS25390	PF13721	SecD export protein N-terminal TM region
AL504_RS25395	PF02699	Preprotein translocase subunit
AL504_RS25400	PF04221	RelB antitoxin
AL504_RS25410	PF01702	Queuine tRNA-ribosyltransferase
AL504_RS25415	PF02547	Queuosine biosynthesis protein
AL504_RS25425	PF00296	Luciferase-like monooxygenase
AL504_RS25430	PF01613	Flavin reductase like domain
AL504_RS25435	PF13458	Periplasmic binding protein
AL504_RS25440	PF02113	D-Ala-D-Ala carboxypeptidase 3 (S13) family
AL504_RS25450	PF14824	Sirohaem biosynthesis protein central
AL504_RS25450	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
AL504_RS25450	PF10414	Sirohaem synthase dimerisation region
AL504_RS25460	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS25465	PF00005	ABC transporter
AL504_RS25475	PF05957	Bacterial protein of unknown function (DUF883)
AL504_RS25490	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
AL504_RS25495	PF11873	Membrane-bound lytic murein transglycosylase C, N-terminal domain
AL504_RS25495	PF01464	Transglycosylase SLT domain
AL504_RS25505	PF00155	Aminotransferase class I and II
AL504_RS25515	PF00390	Malic enzyme, N-terminal domain
AL504_RS25515	PF03949	Malic enzyme, NAD binding domain
AL504_RS25515	PF01515	Phosphate acetyl/butaryl transferase
AL504_RS25520	PF01734	Patatin-like phospholipase
AL504_RS25525	PF01337	Barstar (barnase inhibitor)
AL504_RS25530	PF04452	RNA methyltransferase
AL504_RS25545	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
AL504_RS25545	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AL504_RS25550	PF00162	Phosphoglycerate kinase
AL504_RS25555	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS25560	PF01740	STAS domain
AL504_RS25560	PF00916	Sulfate permease family
AL504_RS25570	PF00871	Acetokinase family
AL504_RS25575	PF01515	Phosphate acetyl/butaryl transferase
AL504_RS25580	PF11339	Protein of unknown function (DUF3141)
AL504_RS25590	PF02798	Glutathione S-transferase, N-terminal domain
AL504_RS25590	PF14834	Glutathione S-transferase, C-terminal domain
AL504_RS25600	PF00583	Acetyltransferase (GNAT) family
AL504_RS25605	PF00226	DnaJ domain
AL504_RS25605	PF01556	DnaJ C terminal domain
AL504_RS25625	PF01384	Phosphate transporter family
AL504_RS25635	PF00994	Probable molybdopterin binding domain
AL504_RS25645	PF01476	LysM domain
AL504_RS25645	PF01551	Peptidase family M23
AL504_RS25645	PF08525	Opacity-associated protein A N-terminal motif
AL504_RS25655	PF01176	Translation initiation factor 1A / IF-1
AL504_RS25665	PF01022	Bacterial regulatory protein, arsR family
AL504_RS25675	PF00005	ABC transporter
AL504_RS25685	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS25695	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS25705	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS25705	PF03466	LysR substrate binding domain
AL504_RS25715	PF06299	Protein of unknown function (DUF1045)
AL504_RS25720	PF07969	Amidohydrolase family
AL504_RS25725	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS25725	PF07702	UTRA domain
AL504_RS25730	PF06754	Phosphonate metabolism protein PhnG
AL504_RS25735	PF05845	Bacterial phosphonate metabolism protein (PhnH)
AL504_RS25740	PF05861	Bacterial phosphonate metabolism protein (PhnI)
AL504_RS25745	PF06007	Phosphonate metabolism protein PhnJ
AL504_RS25750	PF00005	ABC transporter
AL504_RS25755	PF00005	ABC transporter
AL504_RS25760	PF07969	Amidohydrolase family
AL504_RS25775	PF00375	Sodium:dicarboxylate symporter family
AL504_RS25785	PF01116	Fructose-bisphosphate aldolase class-II
AL504_RS25795	PF01259	SAICAR synthetase
AL504_RS25800	PF02600	Disulfide bond formation protein DsbB
AL504_RS25805	PF00731	AIR carboxylase
AL504_RS25810	PF17769	Phosphoribosylaminoimidazole carboxylase C-terminal domain
AL504_RS25810	PF02222	ATP-grasp domain
AL504_RS25815	PF03481	Putative GTP-binding controlling metal-binding
AL504_RS25815	PF01300	Telomere recombination
AL504_RS25820	PF01614	Bacterial transcriptional regulator
AL504_RS25820	PF09339	IclR helix-turn-helix domain
AL504_RS25825	PF01144	Coenzyme A transferase
AL504_RS25830	PF01144	Coenzyme A transferase
AL504_RS25835	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS25840	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL504_RS25845	PF01614	Bacterial transcriptional regulator
AL504_RS25845	PF09339	IclR helix-turn-helix domain
AL504_RS25850	PF00491	Arginase family
AL504_RS25855	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL504_RS25860	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS25865	PF00005	ABC transporter
AL504_RS25870	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AL504_RS25870	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AL504_RS25875	PF00005	ABC transporter
AL504_RS25880	PF00005	ABC transporter
AL504_RS25880	PF12399	Branched-chain amino acid ATP-binding cassette transporter
AL504_RS25885	PF02653	Branched-chain amino acid transport system / permease component
AL504_RS25890	PF02653	Branched-chain amino acid transport system / permease component
AL504_RS25905	PF13193	AMP-binding enzyme C-terminal domain
AL504_RS25905	PF00501	AMP-binding enzyme
AL504_RS25915	PF01202	Shikimate kinase
AL504_RS25920	PF00378	Enoyl-CoA hydratase/isomerase
AL504_RS25930	PF00970	Oxidoreductase FAD-binding domain
AL504_RS25930	PF00175	Oxidoreductase NAD-binding domain 
AL504_RS25930	PF00037	4Fe-4S binding domain
AL504_RS25935	PF01575	MaoC like domain
AL504_RS25960	PF00205	Thiamine pyrophosphate enzyme, central domain
AL504_RS25960	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AL504_RS25960	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AL504_RS25965	PF03466	LysR substrate binding domain
AL504_RS25965	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS25970	PF02899	Phage integrase, N-terminal SAM-like domain
AL504_RS25970	PF00589	Phage integrase family
AL504_RS25975	PF04073	Aminoacyl-tRNA editing domain
AL504_RS25985	PF08240	Alcohol dehydrogenase GroES-like domain
AL504_RS25985	PF00107	Zinc-binding dehydrogenase
AL504_RS25995	PF00768	D-alanyl-D-alanine carboxypeptidase
AL504_RS26005	PF00378	Enoyl-CoA hydratase/isomerase
AL504_RS26010	PF00501	AMP-binding enzyme
AL504_RS26010	PF13193	AMP-binding enzyme C-terminal domain
AL504_RS26015	PF00682	HMGL-like
AL504_RS26025	PF00378	Enoyl-CoA hydratase/isomerase
AL504_RS26030	PF02515	CoA-transferase family III
AL504_RS26035	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS26045	PF03060	Nitronate monooxygenase
AL504_RS26060	PF13361	UvrD-like helicase C-terminal domain
AL504_RS26060	PF00580	UvrD/REP helicase N-terminal domain
AL504_RS26060	PF12705	PD-(D/E)XK nuclease superfamily
AL504_RS26075	PF07660	Secretin and TonB N terminus short domain
AL504_RS26075	PF00593	TonB dependent receptor
AL504_RS26075	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS26085	PF12170	DNA polymerase III tau subunit V interacting with alpha
AL504_RS26085	PF12168	DNA polymerase III subunits tau domain IV DnaB-binding
AL504_RS26085	PF12169	DNA polymerase III subunits gamma and tau domain III
AL504_RS26090	PF02575	YbaB/EbfC DNA-binding family
AL504_RS26095	PF02132	RecR protein
AL504_RS26095	PF13662	Toprim domain
AL504_RS26100	PF02515	CoA-transferase family III
AL504_RS26110	PF00005	ABC transporter
AL504_RS26115	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS26120	PF01126	Heme oxygenase
AL504_RS26130	PF00072	Response regulator receiver domain
AL504_RS26130	PF00486	Transcriptional regulatory protein, C terminal
AL504_RS26135	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS26135	PF00360	Phytochrome region
AL504_RS26135	PF08446	PAS fold
AL504_RS26135	PF01590	GAF domain
AL504_RS26135	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS26145	PF00923	Transaldolase/Fructose-6-phosphate aldolase
AL504_RS26150	PF00117	Glutamine amidotransferase class-I
AL504_RS26150	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
AL504_RS26155	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AL504_RS26155	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AL504_RS26155	PF02142	MGS-like domain
AL504_RS26170	PF00300	Histidine phosphatase superfamily (branch 1)
AL504_RS26175	PF03466	LysR substrate binding domain
AL504_RS26175	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS26180	PF08402	TOBE domain
AL504_RS26180	PF00005	ABC transporter
AL504_RS26185	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS26200	PF00860	Permease family
AL504_RS26205	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL504_RS26205	PF02203	Tar ligand binding domain homologue
AL504_RS26205	PF00672	HAMP domain
AL504_RS26210	PF03449	Transcription elongation factor, N-terminal
AL504_RS26210	PF01272	Transcription elongation factor, GreA/GreB, C-term
AL504_RS26215	PF01985	CRS1 / YhbY (CRM) domain
AL504_RS26220	PF01728	FtsJ-like methyltransferase
AL504_RS26225	PF00004	ATPase family associated with various cellular activities (AAA)
AL504_RS26225	PF17862	AAA+ lid domain
AL504_RS26225	PF06480	FtsH Extracellular
AL504_RS26225	PF01434	Peptidase family M41
AL504_RS26230	PF00809	Pterin binding enzyme
AL504_RS26235	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AL504_RS26235	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AL504_RS26235	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AL504_RS26235	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AL504_RS26245	PF02541	Ppx/GppA phosphatase family
AL504_RS26250	PF13089	Polyphosphate kinase N-terminal domain
AL504_RS26250	PF17941	Polyphosphate kinase C-terminal domain 1
AL504_RS26250	PF02503	Polyphosphate kinase middle domain
AL504_RS26250	PF13090	Polyphosphate kinase C-terminal domain 2
AL504_RS26255	PF12849	PBP superfamily domain
AL504_RS26260	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS26265	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS26270	PF00005	ABC transporter
AL504_RS26275	PF07690	Major Facilitator Superfamily
AL504_RS26285	PF08946	Osmosensory transporter coiled coil
AL504_RS26285	PF00083	Sugar (and other) transporter
AL504_RS26290	PF02627	Carboxymuconolactone decarboxylase family
AL504_RS26295	PF01810	LysE type translocator
AL504_RS26305	PF04325	Protein of unknown function (DUF465)
AL504_RS26320	PF04545	Sigma-70, region 4
AL504_RS26320	PF04542	Sigma-70 region 2 
AL504_RS26330	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS26330	PF03466	LysR substrate binding domain
AL504_RS26335	PF12833	Helix-turn-helix domain
AL504_RS26335	PF06719	AraC-type transcriptional regulator N-terminus
AL504_RS26340	PF00248	Aldo/keto reductase family
AL504_RS26365	PF02469	Fasciclin domain
AL504_RS26370	PF05724	Thiopurine S-methyltransferase (TPMT)
AL504_RS26380	PF06434	Aconitate hydratase 2 N-terminus
AL504_RS26380	PF00330	Aconitase family (aconitate hydratase)
AL504_RS26380	PF11791	Aconitate B N-terminal domain
AL504_RS26400	PF00571	CBS domain
AL504_RS26410	PF05544	Proline racemase
AL504_RS26415	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS26420	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS26425	PF08402	TOBE domain
AL504_RS26425	PF00005	ABC transporter
AL504_RS26445	PF13426	PAS domain
AL504_RS26445	PF08447	PAS fold
AL504_RS26445	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL504_RS26485	PF00924	Mechanosensitive ion channel
AL504_RS26485	PF12795	Mechanosensitive ion channel porin domain
AL504_RS26485	PF12794	Mechanosensitive ion channel inner membrane domain 1
AL504_RS26490	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS26490	PF03466	LysR substrate binding domain
AL504_RS26495	PF02550	Acetyl-CoA hydrolase/transferase N-terminal domain
AL504_RS26495	PF13336	Acetyl-CoA hydrolase/transferase C-terminal domain
AL504_RS26500	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS26500	PF03466	LysR substrate binding domain
AL504_RS26540	PF00596	Class II Aldolase and Adducin N-terminal domain
AL504_RS26550	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS26550	PF03466	LysR substrate binding domain
AL504_RS26565	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
AL504_RS26565	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
AL504_RS26575	PF07690	Major Facilitator Superfamily
AL504_RS26585	PF01425	Amidase
AL504_RS26605	PF00171	Aldehyde dehydrogenase family
AL504_RS26620	PF09334	tRNA synthetases class I (M)
AL504_RS26620	PF13603	Leucyl-tRNA synthetase, Domain 2
AL504_RS26620	PF00133	tRNA synthetases class I (I, L, M and V)
AL504_RS26620	PF08264	Anticodon-binding domain of tRNA
AL504_RS26625	PF07690	Major Facilitator Superfamily
AL504_RS26630	PF01047	MarR family
AL504_RS26640	PF00768	D-alanyl-D-alanine carboxypeptidase
AL504_RS26640	PF07943	Penicillin-binding protein 5, C-terminal domain
AL504_RS26655	PF00916	Sulfate permease family
AL504_RS26655	PF01740	STAS domain
AL504_RS26660	PF12399	Branched-chain amino acid ATP-binding cassette transporter
AL504_RS26660	PF00005	ABC transporter
AL504_RS26670	PF13458	Periplasmic binding protein
AL504_RS26675	PF00471	Ribosomal protein L33
AL504_RS26680	PF00830	Ribosomal L28 family
AL504_RS26685	PF07690	Major Facilitator Superfamily
AL504_RS26700	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS26705	PF00005	ABC transporter
AL504_RS26705	PF00571	CBS domain
AL504_RS26710	PF01361	Tautomerase enzyme
AL504_RS26715	PF00356	Bacterial regulatory proteins, lacI family
AL504_RS26720	PF01370	NAD dependent epimerase/dehydratase family
AL504_RS26725	PF10282	Lactonase, 7-bladed beta-propeller
AL504_RS26730	PF02653	Branched-chain amino acid transport system / permease component
AL504_RS26735	PF00005	ABC transporter
AL504_RS26740	PF13407	Periplasmic binding protein domain
AL504_RS26745	PF04966	Carbohydrate-selective porin, OprB family
AL504_RS26750	PF02803	Thiolase, C-terminal domain
AL504_RS26750	PF00108	Thiolase, N-terminal domain
AL504_RS26760	PF07729	FCD domain
AL504_RS26760	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS26770	PF00378	Enoyl-CoA hydratase/isomerase
AL504_RS26775	PF00501	AMP-binding enzyme
AL504_RS26775	PF13193	AMP-binding enzyme C-terminal domain
AL504_RS26780	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS26785	PF00248	Aldo/keto reductase family
AL504_RS26795	PF02653	Branched-chain amino acid transport system / permease component
AL504_RS26800	PF00005	ABC transporter
AL504_RS26810	PF01266	FAD dependent oxidoreductase
AL504_RS26840	PF02675	S-adenosylmethionine decarboxylase 
AL504_RS26850	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS26855	PF03459	TOBE domain
AL504_RS26855	PF00005	ABC transporter
AL504_RS26860	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS26860	PF03459	TOBE domain
AL504_RS26880	PF00529	HlyD membrane-fusion protein of T1SS
AL504_RS26880	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
AL504_RS26885	PF00873	AcrB/AcrD/AcrF family
AL504_RS26890	PF02321	Outer membrane efflux protein
AL504_RS26895	PF03740	Pyridoxal phosphate biosynthesis protein PdxJ
AL504_RS26900	PF01648	4'-phosphopantetheinyl transferase superfamily
AL504_RS26905	PF00933	Glycosyl hydrolase family 3 N terminal domain
AL504_RS26910	PF01541	GIY-YIG catalytic domain
AL504_RS26910	PF08459	UvrC Helix-hairpin-helix N-terminal
AL504_RS26910	PF02151	UvrB/uvrC motif
AL504_RS26915	PF01066	CDP-alcohol phosphatidyltransferase
AL504_RS26925	PF00180	Isocitrate/isopropylmalate dehydrogenase
AL504_RS26930	PF03466	LysR substrate binding domain
AL504_RS26930	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS26935	PF00034	Cytochrome c
AL504_RS26935	PF03150	Di-haem cytochrome c peroxidase
AL504_RS26940	PF14489	QueF-like protein
AL504_RS26940	PF14819	Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term
AL504_RS26945	PF00463	Isocitrate lyase family
AL504_RS26960	PF13649	Methyltransferase domain
AL504_RS26965	PF00561	alpha/beta hydrolase fold
AL504_RS26970	PF00155	Aminotransferase class I and II
AL504_RS26975	PF00202	Aminotransferase class-III
AL504_RS26990	PF00115	Cytochrome C and Quinol oxidase polypeptide I
AL504_RS27005	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
AL504_RS27005	PF14715	N-terminal domain of cytochrome oxidase-cbb3, FixP 
AL504_RS27010	PF13746	4Fe-4S dicluster domain
AL504_RS27010	PF11614	IG-like fold at C-terminal of FixG, putative oxidoreductase
AL504_RS27010	PF12801	4Fe-4S binding domain
AL504_RS27030	PF00171	Aldehyde dehydrogenase family
AL504_RS27035	PF00005	ABC transporter
AL504_RS27040	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL504_RS27045	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS27050	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS27055	PF01266	FAD dependent oxidoreductase
AL504_RS27090	PF04229	GrpB protein
AL504_RS27100	PF00534	Glycosyl transferases group 1
AL504_RS27100	PF13439	Glycosyltransferase Family 4
AL504_RS27115	PF02321	Outer membrane efflux protein
AL504_RS27120	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
AL504_RS27120	PF00529	HlyD membrane-fusion protein of T1SS
AL504_RS27135	PF03466	LysR substrate binding domain
AL504_RS27135	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS27140	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS27140	PF00155	Aminotransferase class I and II
AL504_RS27145	PF09335	SNARE associated Golgi protein
AL504_RS27150	PF13609	Gram-negative porin
AL504_RS27155	PF02129	X-Pro dipeptidyl-peptidase (S15 family)
AL504_RS27155	PF08530	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
AL504_RS27160	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL504_RS27165	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL504_RS27165	PF00005	ABC transporter
AL504_RS27170	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL504_RS27170	PF00005	ABC transporter
AL504_RS27175	PF12911	N-terminal TM domain of oligopeptide transport permease C
AL504_RS27175	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS27180	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS27185	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS27185	PF03466	LysR substrate binding domain
AL504_RS27190	PF00106	short chain dehydrogenase
AL504_RS27195	PF02566	OsmC-like protein
AL504_RS27200	PF00672	HAMP domain
AL504_RS27200	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS27200	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS27200	PF16527	Two-component sensor protein CpxA, periplasmic domain
AL504_RS27205	PF00486	Transcriptional regulatory protein, C terminal
AL504_RS27205	PF00072	Response regulator receiver domain
AL504_RS27210	PF17991	Thioredoxin like C-terminal domain
AL504_RS27210	PF00578	AhpC/TSA family
AL504_RS27210	PF02683	Cytochrome C biogenesis protein transmembrane region
AL504_RS27215	PF02683	Cytochrome C biogenesis protein transmembrane region
AL504_RS27215	PF00578	AhpC/TSA family
AL504_RS27215	PF17991	Thioredoxin like C-terminal domain
AL504_RS27225	PF00595	PDZ domain
AL504_RS27235	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS27240	PF07729	FCD domain
AL504_RS27240	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS27255	PF08281	Sigma-70, region 4
AL504_RS27255	PF04542	Sigma-70 region 2 
AL504_RS27265	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS27265	PF00593	TonB dependent receptor
AL504_RS27275	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
AL504_RS27275	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AL504_RS27280	PF01557	Fumarylacetoacetate (FAA) hydrolase family
AL504_RS27285	PF12833	Helix-turn-helix domain
AL504_RS27285	PF02311	AraC-like ligand binding domain
AL504_RS27295	PF13091	PLD-like domain
AL504_RS27320	PF00561	alpha/beta hydrolase fold
AL504_RS27360	PF01810	LysE type translocator
AL504_RS27365	PF12445	Flagellin protein 
AL504_RS27365	PF00669	Bacterial flagellin N-terminal helical region
AL504_RS27365	PF00700	Bacterial flagellin C-terminal helical region
AL504_RS27370	PF00072	Response regulator receiver domain
AL504_RS27370	PF00486	Transcriptional regulatory protein, C terminal
AL504_RS27385	PF00593	TonB dependent receptor
AL504_RS27385	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS27390	PF16220	Domain of unknown function (DUF4880)
AL504_RS27390	PF04773	FecR protein
AL504_RS27395	PF08281	Sigma-70, region 4
AL504_RS27395	PF04542	Sigma-70 region 2 
AL504_RS27405	PF02753	Pili assembly chaperone PapD, C-terminal domain
AL504_RS27405	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
AL504_RS27410	PF13953	PapC C-terminal domain
AL504_RS27410	PF13954	PapC N-terminal domain
AL504_RS27410	PF00577	Outer membrane usher protein
AL504_RS27415	PF00419	Fimbrial protein
AL504_RS27425	PF00072	Response regulator receiver domain
AL504_RS27425	PF00486	Transcriptional regulatory protein, C terminal
AL504_RS27430	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS27430	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS27430	PF08521	Two-component sensor kinase N-terminal
AL504_RS27435	PF02195	ParB-like nuclease domain
AL504_RS27440	PF11922	Domain of unknown function (DUF3440)
AL504_RS27440	PF01507	Phosphoadenosine phosphosulfate reductase family
AL504_RS27445	PF02659	Putative manganese efflux pump
AL504_RS27450	PF01588	Putative tRNA binding domain
AL504_RS27510	PF01300	Telomere recombination
AL504_RS27515	PF02163	Peptidase family M50
AL504_RS27520	PF00701	Dihydrodipicolinate synthetase family
AL504_RS27525	PF06804	NlpB/DapX lipoprotein
AL504_RS27535	PF08007	Cupin superfamily protein
AL504_RS27540	PF00488	MutS domain V
AL504_RS27540	PF01624	MutS domain I
AL504_RS27540	PF05188	MutS domain II
AL504_RS27540	PF05190	MutS family domain IV
AL504_RS27540	PF05192	MutS domain III
AL504_RS27560	PF07660	Secretin and TonB N terminus short domain
AL504_RS27560	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS27560	PF00593	TonB dependent receptor
AL504_RS27575	PF01872	RibD C-terminal domain
AL504_RS27585	PF03466	LysR substrate binding domain
AL504_RS27585	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS27610	PF04235	Protein of unknown function (DUF418)
AL504_RS27625	PF00107	Zinc-binding dehydrogenase
AL504_RS27625	PF08240	Alcohol dehydrogenase GroES-like domain
AL504_RS27630	PF00106	short chain dehydrogenase
AL504_RS27635	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS27635	PF03466	LysR substrate binding domain
AL504_RS27645	PF07311	Dodecin
AL504_RS27650	PF03358	NADPH-dependent FMN reductase
AL504_RS27665	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS27665	PF07729	FCD domain
AL504_RS27670	PF01425	Amidase
AL504_RS27680	PF00005	ABC transporter
AL504_RS27685	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS27690	PF09084	NMT1/THI5 like
AL504_RS27695	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS27695	PF03466	LysR substrate binding domain
AL504_RS27705	PF00083	Sugar (and other) transporter
AL504_RS27730	PF00924	Mechanosensitive ion channel
AL504_RS27730	PF05552	Conserved TM helix
AL504_RS27745	PF03358	NADPH-dependent FMN reductase
AL504_RS27750	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS27750	PF03466	LysR substrate binding domain
AL504_RS27760	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS27770	PF00459	Inositol monophosphatase family
AL504_RS27775	PF17761	DUF1016 N-terminal domain
AL504_RS27775	PF06250	YhcG PDDEXK nuclease domain
AL504_RS27780	PF02424	ApbE family
AL504_RS27790	PF12679	ABC-2 family transporter protein
AL504_RS27795	PF00005	ABC transporter
AL504_RS27800	PF05048	Periplasmic copper-binding protein (NosD)
AL504_RS27805	PF18764	Nitrous oxide reductase propeller repeat
AL504_RS27805	PF18793	Nitrous oxide reductase propeller repeat 2
AL504_RS27805	PF13473	Cupredoxin-like domain
AL504_RS27815	PF00127	Copper binding proteins, plastocyanin/azurin family
AL504_RS27820	PF01502	Phosphoribosyl-AMP cyclohydrolase
AL504_RS27825	PF01979	Amidohydrolase family
AL504_RS27830	PF00132	Bacterial transferase hexapeptide (six repeats)
AL504_RS27835	PF03471	Transporter associated domain
AL504_RS27835	PF03741	Integral membrane protein TerC family
AL504_RS27840	PF02673	Bacitracin resistance protein BacA
AL504_RS27845	PF00149	Calcineurin-like phosphoesterase
AL504_RS27850	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
AL504_RS27860	PF01406	tRNA synthetases class I (C) catalytic domain
AL504_RS27860	PF09190	DALR domain
AL504_RS27870	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
AL504_RS27875	PF09179	TilS substrate binding domain
AL504_RS27875	PF01171	PP-loop family
AL504_RS27880	PF01842	ACT domain
AL504_RS27880	PF00696	Amino acid kinase family
AL504_RS27880	PF13840	ACT domain 
AL504_RS27895	PF12801	4Fe-4S binding domain
AL504_RS27895	PF11614	IG-like fold at C-terminal of FixG, putative oxidoreductase
AL504_RS27895	PF13746	4Fe-4S dicluster domain
AL504_RS27900	PF14715	N-terminal domain of cytochrome oxidase-cbb3, FixP 
AL504_RS27900	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
AL504_RS27915	PF00115	Cytochrome C and Quinol oxidase polypeptide I
AL504_RS27930	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
AL504_RS27935	PF00034	Cytochrome c
AL504_RS27940	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS27940	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS27940	PF09456	RcsC Alpha-Beta-Loop (ABL)
AL504_RS27940	PF00072	Response regulator receiver domain
AL504_RS27945	PF12792	CSS motif domain associated with EAL 
AL504_RS27945	PF00563	EAL domain
AL504_RS27950	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS27950	PF00072	Response regulator receiver domain
AL504_RS27950	PF09456	RcsC Alpha-Beta-Loop (ABL)
AL504_RS27950	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS27955	PF00581	Rhodanese-like domain
AL504_RS27960	PF04185	Phosphoesterase family
AL504_RS27965	PF17932	Tetracyclin repressor-like, C-terminal domain
AL504_RS27965	PF00440	Bacterial regulatory proteins, tetR family
AL504_RS27970	PF00005	ABC transporter
AL504_RS28010	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS28010	PF03466	LysR substrate binding domain
AL504_RS28035	PF02146	Sir2 family
AL504_RS28040	PF05995	Cysteine dioxygenase type I
AL504_RS28045	PF09339	IclR helix-turn-helix domain
AL504_RS28045	PF01614	Bacterial transcriptional regulator
AL504_RS28050	PF02515	CoA-transferase family III
AL504_RS28055	PF00378	Enoyl-CoA hydratase/isomerase
AL504_RS28060	PF01144	Coenzyme A transferase
AL504_RS28065	PF01144	Coenzyme A transferase
AL504_RS28075	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
AL504_RS28085	PF03812	2-keto-3-deoxygluconate permease
AL504_RS28090	PF00005	ABC transporter
AL504_RS28090	PF00664	ABC transporter transmembrane region
AL504_RS28100	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS28105	PF16347	Domain of unknown function (DUF4976)
AL504_RS28105	PF00884	Sulfatase
AL504_RS28110	PF13193	AMP-binding enzyme C-terminal domain
AL504_RS28110	PF00501	AMP-binding enzyme
AL504_RS28125	PF02803	Thiolase, C-terminal domain
AL504_RS28125	PF00108	Thiolase, N-terminal domain
AL504_RS28130	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
AL504_RS28130	PF00378	Enoyl-CoA hydratase/isomerase
AL504_RS28130	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
AL504_RS28140	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
AL504_RS28140	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
AL504_RS28140	PF00378	Enoyl-CoA hydratase/isomerase
AL504_RS28145	PF00108	Thiolase, N-terminal domain
AL504_RS28145	PF02803	Thiolase, C-terminal domain
AL504_RS28150	PF09317	Domain of unknown function (DUF1974)
AL504_RS28150	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL504_RS28150	PF02770	Acyl-CoA dehydrogenase, middle domain
AL504_RS28150	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL504_RS28155	PF08361	MAATS-type transcriptional repressor, C-terminal region
AL504_RS28155	PF00440	Bacterial regulatory proteins, tetR family
AL504_RS28165	PF00196	Bacterial regulatory proteins, luxR family
AL504_RS28165	PF00072	Response regulator receiver domain
AL504_RS28170	PF00072	Response regulator receiver domain
AL504_RS28170	PF00196	Bacterial regulatory proteins, luxR family
AL504_RS28175	PF13579	Glycosyl transferase 4-like domain
AL504_RS28175	PF00534	Glycosyl transferases group 1
AL504_RS28180	PF00132	Bacterial transferase hexapeptide (six repeats)
AL504_RS28185	PF00535	Glycosyl transferase family 2
AL504_RS28190	PF00534	Glycosyl transferases group 1
AL504_RS28190	PF13439	Glycosyltransferase Family 4
AL504_RS28200	PF00535	Glycosyl transferase family 2
AL504_RS28210	PF01370	NAD dependent epimerase/dehydratase family
AL504_RS28215	PF16363	GDP-mannose 4,6 dehydratase
AL504_RS28225	PF00483	Nucleotidyl transferase
AL504_RS28225	PF01050	Mannose-6-phosphate isomerase
AL504_RS28230	PF00293	NUDIX domain
AL504_RS28235	PF02397	Bacterial sugar transferase
AL504_RS28240	PF10531	SLBB domain
AL504_RS28240	PF02563	Polysaccharide biosynthesis/export protein
AL504_RS28245	PF13807	G-rich domain on putative tyrosine kinase
AL504_RS28245	PF02706	Chain length determinant protein
AL504_RS28245	PF13614	AAA domain
AL504_RS28250	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AL504_RS28250	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AL504_RS28250	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AL504_RS28250	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AL504_RS28255	PF00342	Phosphoglucose isomerase
AL504_RS28260	PF16363	GDP-mannose 4,6 dehydratase
AL504_RS28265	PF00132	Bacterial transferase hexapeptide (six repeats)
AL504_RS28270	PF02146	Sir2 family
AL504_RS28275	PF00459	Inositol monophosphatase family
AL504_RS28280	PF00171	Aldehyde dehydrogenase family
AL504_RS28285	PF00202	Aminotransferase class-III
AL504_RS28290	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS28290	PF00155	Aminotransferase class I and II
AL504_RS28300	PF13361	UvrD-like helicase C-terminal domain
AL504_RS28300	PF00580	UvrD/REP helicase N-terminal domain
AL504_RS28305	PF01544	CorA-like Mg2+ transporter protein
AL504_RS28320	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS28325	PF12911	N-terminal TM domain of oligopeptide transport permease C
AL504_RS28325	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS28330	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL504_RS28330	PF00005	ABC transporter
AL504_RS28335	PF01494	FAD binding domain
AL504_RS28340	PF01047	MarR family
AL504_RS28350	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
AL504_RS28350	PF08479	POTRA domain, ShlB-type
AL504_RS28355	PF03707	Bacterial signalling protein N terminal repeat
AL504_RS28355	PF00563	EAL domain
AL504_RS28355	PF00990	Diguanylate cyclase, GGDEF domain
AL504_RS28385	PF04972	BON domain
AL504_RS28385	PF00263	Bacterial type II and III secretion system protein
AL504_RS28385	PF13629	Pilus formation protein N terminal region
AL504_RS28395	PF00437	Type II/IV secretion system protein
AL504_RS28425	PF02954	Bacterial regulatory protein, Fis family
AL504_RS28425	PF00072	Response regulator receiver domain
AL504_RS28425	PF00158	Sigma-54 interaction domain
AL504_RS28440	PF01132	Elongation factor P (EF-P) OB domain
AL504_RS28440	PF08207	Elongation factor P (EF-P) KOW-like domain
AL504_RS28440	PF09285	Elongation factor P, C-terminal
AL504_RS28455	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
AL504_RS28460	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS28460	PF03466	LysR substrate binding domain
AL504_RS28470	PF07690	Major Facilitator Superfamily
AL504_RS28475	PF00529	HlyD membrane-fusion protein of T1SS
AL504_RS28475	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
AL504_RS28480	PF02321	Outer membrane efflux protein
AL504_RS28485	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS28485	PF03466	LysR substrate binding domain
AL504_RS28490	PF01389	OmpA-like transmembrane domain
AL504_RS28490	PF00691	OmpA family
AL504_RS28495	PF00694	Aconitase C-terminal domain
AL504_RS28495	PF00330	Aconitase family (aconitate hydratase)
AL504_RS28500	PF03466	LysR substrate binding domain
AL504_RS28500	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS28510	PF00593	TonB dependent receptor
AL504_RS28510	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS28520	PF00107	Zinc-binding dehydrogenase
AL504_RS28520	PF14765	Polyketide synthase dehydratase
AL504_RS28520	PF08240	Alcohol dehydrogenase GroES-like domain
AL504_RS28520	PF00698	Acyl transferase domain
AL504_RS28520	PF02801	Beta-ketoacyl synthase, C-terminal domain
AL504_RS28520	PF00109	Beta-ketoacyl synthase, N-terminal domain
AL504_RS28520	PF16197	Ketoacyl-synthetase C-terminal extension
AL504_RS28520	PF00550	Phosphopantetheine attachment site
AL504_RS28520	PF08659	KR domain
AL504_RS28525	PF00005	ABC transporter
AL504_RS28530	PF00005	ABC transporter
AL504_RS28530	PF12399	Branched-chain amino acid ATP-binding cassette transporter
AL504_RS28535	PF02653	Branched-chain amino acid transport system / permease component
AL504_RS28540	PF13458	Periplasmic binding protein
AL504_RS28550	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
AL504_RS28550	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
AL504_RS28555	PF05853	beta-keto acid cleavage enzyme
AL504_RS28560	PF00465	Iron-containing alcohol dehydrogenase 
AL504_RS28565	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS28565	PF07729	FCD domain
AL504_RS28570	PF00456	Transketolase, thiamine diphosphate binding domain
AL504_RS28575	PF02780	Transketolase, C-terminal domain
AL504_RS28575	PF02779	Transketolase, pyrimidine binding domain
AL504_RS28580	PF01488	Shikimate / quinate 5-dehydrogenase
AL504_RS28580	PF18317	Shikimate 5'-dehydrogenase C-terminal domain
AL504_RS28580	PF08501	Shikimate dehydrogenase substrate binding domain
AL504_RS28585	PF05199	GMC oxidoreductase
AL504_RS28585	PF00732	GMC oxidoreductase
AL504_RS28590	PF13378	Enolase C-terminal domain-like
AL504_RS28590	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
AL504_RS28595	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL504_RS28600	PF00005	ABC transporter
AL504_RS28605	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS28610	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS28615	PF04295	D-galactarate dehydratase / Altronate hydrolase, C terminus
AL504_RS28615	PF08666	SAF domain
AL504_RS28630	PF01557	Fumarylacetoacetate (FAA) hydrolase family
AL504_RS28635	PF01614	Bacterial transcriptional regulator
AL504_RS28635	PF09339	IclR helix-turn-helix domain
AL504_RS28655	PF00561	alpha/beta hydrolase fold
AL504_RS28665	PF00196	Bacterial regulatory proteins, luxR family
AL504_RS28675	PF13545	Crp-like helix-turn-helix domain
AL504_RS28675	PF00027	Cyclic nucleotide-binding domain
AL504_RS28685	PF01032	FecCD transport family
AL504_RS28690	PF00005	ABC transporter
AL504_RS28705	PF00593	TonB dependent receptor
AL504_RS28705	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS28720	PF13018	Extended Signal Peptide of Type V secretion system
AL504_RS28720	PF05658	Head domain of trimeric autotransporter adhesin
AL504_RS28720	PF05662	Coiled stalk of trimeric autotransporter adhesin
AL504_RS28720	PF03895	YadA-like membrane anchor domain
AL504_RS28730	PF03895	YadA-like membrane anchor domain
AL504_RS28730	PF05662	Coiled stalk of trimeric autotransporter adhesin
AL504_RS28730	PF13018	Extended Signal Peptide of Type V secretion system
AL504_RS28730	PF05658	Head domain of trimeric autotransporter adhesin
AL504_RS28735	PF13018	Extended Signal Peptide of Type V secretion system
AL504_RS28735	PF03895	YadA-like membrane anchor domain
AL504_RS28735	PF05658	Head domain of trimeric autotransporter adhesin
AL504_RS28735	PF05662	Coiled stalk of trimeric autotransporter adhesin
AL504_RS28740	PF00072	Response regulator receiver domain
AL504_RS28740	PF00196	Bacterial regulatory proteins, luxR family
AL504_RS28750	PF00072	Response regulator receiver domain
AL504_RS28750	PF00196	Bacterial regulatory proteins, luxR family
AL504_RS28755	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS28755	PF00512	His Kinase A (phospho-acceptor) domain
AL504_RS28755	PF01627	Hpt domain
AL504_RS28755	PF00072	Response regulator receiver domain
AL504_RS28755	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL504_RS28760	PF07690	Major Facilitator Superfamily
AL504_RS28760	PF00083	Sugar (and other) transporter
AL504_RS28765	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS28765	PF00155	Aminotransferase class I and II
AL504_RS28770	PF00202	Aminotransferase class-III
AL504_RS28780	PF07687	Peptidase dimerisation domain
AL504_RS28780	PF01546	Peptidase family M20/M25/M40
AL504_RS28790	PF02735	Ku70/Ku80 beta-barrel domain
AL504_RS28795	PF04679	ATP dependent DNA ligase C terminal region        
AL504_RS28795	PF01068	ATP dependent DNA ligase domain
AL504_RS28795	PF13298	DNA polymerase Ligase (LigD)
AL504_RS28800	PF00324	Amino acid permease
AL504_RS28805	PF00128	Alpha amylase, catalytic domain
AL504_RS28815	PF00128	Alpha amylase, catalytic domain
AL504_RS28815	PF11941	Domain of unknown function (DUF3459)
AL504_RS28815	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
AL504_RS28820	PF00128	Alpha amylase, catalytic domain
AL504_RS28820	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
AL504_RS28825	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
AL504_RS28825	PF02806	Alpha amylase, C-terminal all-beta domain
AL504_RS28825	PF00128	Alpha amylase, catalytic domain
AL504_RS28830	PF00128	Alpha amylase, catalytic domain
AL504_RS28830	PF16657	Maltogenic Amylase, C-terminal domain
AL504_RS28835	PF11896	Domain of unknown function (DUF3416)
AL504_RS28835	PF00128	Alpha amylase, catalytic domain
AL504_RS28840	PF08323	Starch synthase catalytic domain
AL504_RS28840	PF00534	Glycosyl transferases group 1
AL504_RS28845	PF03706	Lysylphosphatidylglycerol synthase TM region
AL504_RS28850	PF13091	PLD-like domain
AL504_RS28855	PF03372	Endonuclease/Exonuclease/phosphatase family
AL504_RS28860	PF01699	Sodium/calcium exchanger protein
AL504_RS28875	PF05974	Domain of unknown function (DUF892)
AL504_RS28885	PF00342	Phosphoglucose isomerase
AL504_RS28895	PF00924	Mechanosensitive ion channel
AL504_RS28905	PF00107	Zinc-binding dehydrogenase
AL504_RS28905	PF13823	Alcohol dehydrogenase GroES-associated
AL504_RS28905	PF08240	Alcohol dehydrogenase GroES-like domain
AL504_RS28965	PF00107	Zinc-binding dehydrogenase
AL504_RS28965	PF08240	Alcohol dehydrogenase GroES-like domain
AL504_RS28975	PF17042	Nucleotide-binding C-terminal domain
AL504_RS28975	PF07005	Sugar-binding N-terminal domain
AL504_RS28980	PF00016	Ribulose bisphosphate carboxylase large chain, catalytic domain
AL504_RS28980	PF02788	Ribulose bisphosphate carboxylase large chain, N-terminal domain
AL504_RS28990	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
AL504_RS28995	PF03480	Bacterial extracellular solute-binding protein, family 7
AL504_RS29000	PF00356	Bacterial regulatory proteins, lacI family
AL504_RS29005	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
AL504_RS29005	PF00356	Bacterial regulatory proteins, lacI family
AL504_RS29010	PF00171	Aldehyde dehydrogenase family
AL504_RS29015	PF06441	Epoxide hydrolase N terminus
AL504_RS29030	PF18011	C-terminal domain found in long catalases
AL504_RS29030	PF00199	Catalase
AL504_RS29030	PF06628	Catalase-related immune-responsive
AL504_RS29055	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS29065	PF00596	Class II Aldolase and Adducin N-terminal domain
AL504_RS29070	PF01381	Helix-turn-helix
AL504_RS29070	PF08671	Anti-repressor SinI
AL504_RS29125	PF01618	MotA/TolQ/ExbB proton channel family
AL504_RS29130	PF02472	Biopolymer transport protein ExbD/TolR
AL504_RS29170	PF08543	Phosphomethylpyrimidine kinase
AL504_RS29175	PF02560	Cyanate lyase C-terminal domain
AL504_RS29180	PF00005	ABC transporter
AL504_RS29185	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS29190	PF00005	ABC transporter
AL504_RS29195	PF00196	Bacterial regulatory proteins, luxR family
AL504_RS29195	PF00072	Response regulator receiver domain
AL504_RS29200	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL504_RS29200	PF07730	Histidine kinase
AL504_RS29200	PF05231	MASE1
AL504_RS29205	PF00005	ABC transporter
AL504_RS29210	PF01061	ABC-2 type transporter
AL504_RS29215	PF13417	Glutathione S-transferase, N-terminal domain
AL504_RS29225	PF02803	Thiolase, C-terminal domain
AL504_RS29225	PF00108	Thiolase, N-terminal domain
AL504_RS29235	PF00196	Bacterial regulatory proteins, luxR family
AL504_RS29235	PF00072	Response regulator receiver domain
AL504_RS29240	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
AL504_RS29250	PF03480	Bacterial extracellular solute-binding protein, family 7
AL504_RS29265	PF00975	Thioesterase domain
AL504_RS29265	PF00550	Phosphopantetheine attachment site
AL504_RS29265	PF00391	PEP-utilising enzyme, mobile domain
AL504_RS29265	PF08241	Methyltransferase domain
AL504_RS29265	PF00668	Condensation domain
AL504_RS29265	PF13193	AMP-binding enzyme C-terminal domain
AL504_RS29265	PF00501	AMP-binding enzyme
AL504_RS29270	PF16197	Ketoacyl-synthetase C-terminal extension
AL504_RS29270	PF00109	Beta-ketoacyl synthase, N-terminal domain
AL504_RS29270	PF02801	Beta-ketoacyl synthase, C-terminal domain
AL504_RS29270	PF08659	KR domain
AL504_RS29270	PF00698	Acyl transferase domain
AL504_RS29270	PF00550	Phosphopantetheine attachment site
AL504_RS29270	PF14765	Polyketide synthase dehydratase
AL504_RS29270	PF08240	Alcohol dehydrogenase GroES-like domain
AL504_RS29285	PF00848	Ring hydroxylating alpha subunit (catalytic domain)
AL504_RS29285	PF00355	Rieske [2Fe-2S] domain
AL504_RS29310	PF01494	FAD binding domain
AL504_RS29315	PF03006	Haemolysin-III related
AL504_RS29345	PF12833	Helix-turn-helix domain
AL504_RS29345	PF02805	Metal binding domain of Ada
AL504_RS29355	PF01979	Amidohydrolase family
AL504_RS29360	PF00795	Carbon-nitrogen hydrolase
AL504_RS29365	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS29365	PF03466	LysR substrate binding domain
AL504_RS29370	PF01177	Asp/Glu/Hydantoin racemase
AL504_RS29375	PF00005	ABC transporter
AL504_RS29375	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL504_RS29380	PF01979	Amidohydrolase family
AL504_RS29385	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL504_RS29390	PF12911	N-terminal TM domain of oligopeptide transport permease C
AL504_RS29390	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS29395	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS29400	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS29405	PF00561	alpha/beta hydrolase fold
AL504_RS29410	PF07690	Major Facilitator Superfamily
AL504_RS29415	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS29415	PF03466	LysR substrate binding domain
AL504_RS29435	PF00350	Dynamin family
AL504_RS29440	PF00350	Dynamin family
AL504_RS29505	PF00561	alpha/beta hydrolase fold
AL504_RS29510	PF04261	Dyp-type peroxidase family 
AL504_RS29525	PF00175	Oxidoreductase NAD-binding domain 
AL504_RS29525	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL504_RS29525	PF00970	Oxidoreductase FAD-binding domain
AL504_RS29530	PF00155	Aminotransferase class I and II
AL504_RS29530	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS29535	PF02567	Phenazine biosynthesis-like protein
AL504_RS29545	PF03466	LysR substrate binding domain
AL504_RS29545	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS29550	PF07690	Major Facilitator Superfamily
AL504_RS29555	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS29555	PF03466	LysR substrate binding domain
AL504_RS29560	PF01266	FAD dependent oxidoreductase
AL504_RS29565	PF00144	Beta-lactamase
AL504_RS29570	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
AL504_RS29570	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
AL504_RS29585	PF07690	Major Facilitator Superfamily
AL504_RS29595	PF03180	NLPA lipoprotein
AL504_RS29600	PF00005	ABC transporter
AL504_RS29600	PF09383	NIL domain
AL504_RS29605	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS29610	PF01053	Cys/Met metabolism PLP-dependent enzyme
AL504_RS29625	PF03976	Polyphosphate kinase 2 (PPK2)
AL504_RS29630	PF01479	S4 domain
AL504_RS29635	PF00990	Diguanylate cyclase, GGDEF domain
AL504_RS29635	PF03707	Bacterial signalling protein N terminal repeat
AL504_RS29635	PF00563	EAL domain
AL504_RS29640	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS29650	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS29650	PF03466	LysR substrate binding domain
AL504_RS29655	PF06472	ABC transporter transmembrane region 2
AL504_RS29655	PF00005	ABC transporter
AL504_RS29660	PF03447	Homoserine dehydrogenase, NAD binding domain
AL504_RS29660	PF01958	Domain of unknown function DUF108
AL504_RS29665	PF00583	Acetyltransferase (GNAT) family
AL504_RS29675	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS29680	PF01546	Peptidase family M20/M25/M40
AL504_RS29680	PF07687	Peptidase dimerisation domain
AL504_RS29685	PF07690	Major Facilitator Superfamily
AL504_RS29695	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS29700	PF00135	Carboxylesterase family
AL504_RS29705	PF00962	Adenosine/AMP deaminase
AL504_RS29710	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS29710	PF03466	LysR substrate binding domain
AL504_RS29720	PF01554	MatE
AL504_RS29735	PF13673	Acetyltransferase (GNAT) domain
AL504_RS29735	PF00958	GMP synthase C terminal domain
AL504_RS29735	PF13302	Acetyltransferase (GNAT) domain
AL504_RS29735	PF03352	Methyladenine glycosylase
AL504_RS29735	PF00117	Glutamine amidotransferase class-I
AL504_RS29740	PF03352	Methyladenine glycosylase
AL504_RS29740	PF00117	Glutamine amidotransferase class-I
AL504_RS29740	PF13302	Acetyltransferase (GNAT) domain
AL504_RS29740	PF13673	Acetyltransferase (GNAT) domain
AL504_RS29740	PF00958	GMP synthase C terminal domain
AL504_RS29750	PF12911	N-terminal TM domain of oligopeptide transport permease C
AL504_RS29750	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS29755	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS29760	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL504_RS29765	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL504_RS29765	PF00005	ABC transporter
AL504_RS29775	PF01037	Lrp/AsnC ligand binding domain
AL504_RS29775	PF13404	AsnC-type helix-turn-helix domain
AL504_RS29790	PF00990	Diguanylate cyclase, GGDEF domain
AL504_RS29795	PF03069	Acetamidase/Formamidase family
AL504_RS29825	PF00043	Glutathione S-transferase, C-terminal domain
AL504_RS29825	PF13417	Glutathione S-transferase, N-terminal domain
AL504_RS29840	PF12843	Putative quorum-sensing-regulated virulence factor
AL504_RS29855	PF01965	DJ-1/PfpI family
AL504_RS29860	PF12833	Helix-turn-helix domain
AL504_RS29865	PF00593	TonB dependent receptor
AL504_RS29865	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS29870	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS29870	PF00593	TonB dependent receptor
AL504_RS29890	PF03466	LysR substrate binding domain
AL504_RS29890	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS29895	PF08240	Alcohol dehydrogenase GroES-like domain
AL504_RS29895	PF00107	Zinc-binding dehydrogenase
AL504_RS29900	PF00293	NUDIX domain
AL504_RS29910	PF02627	Carboxymuconolactone decarboxylase family
AL504_RS29915	PF00083	Sugar (and other) transporter
AL504_RS29925	PF13545	Crp-like helix-turn-helix domain
AL504_RS29925	PF00027	Cyclic nucleotide-binding domain
AL504_RS29935	PF00004	ATPase family associated with various cellular activities (AAA)
AL504_RS29935	PF07724	AAA domain (Cdc48 subfamily)
AL504_RS29935	PF17871	AAA lid domain
AL504_RS29935	PF02861	Clp amino terminal domain, pathogenicity island component
AL504_RS29935	PF10431	C-terminal, D2-small domain, of ClpB protein 
AL504_RS29965	PF09370	Phosphoenolpyruvate hydrolase-like
AL504_RS29975	PF03466	LysR substrate binding domain
AL504_RS29975	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS29980	PF07969	Amidohydrolase family
AL504_RS29985	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS29995	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
AL504_RS30015	PF00842	Alanine racemase, C-terminal domain
AL504_RS30015	PF01168	Alanine racemase, N-terminal domain
AL504_RS30025	PF03328	HpcH/HpaI aldolase/citrate lyase family
AL504_RS30030	PF01557	Fumarylacetoacetate (FAA) hydrolase family
AL504_RS30035	PF01557	Fumarylacetoacetate (FAA) hydrolase family
AL504_RS30040	PF01557	Fumarylacetoacetate (FAA) hydrolase family
AL504_RS30045	PF00171	Aldehyde dehydrogenase family
AL504_RS30050	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
AL504_RS30065	PF18073	Rubredoxin metal binding domain
AL504_RS30080	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL504_RS30080	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AL504_RS30085	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS30090	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS30100	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS30100	PF07729	FCD domain
AL504_RS30105	PF02615	Malate/L-lactate dehydrogenase
AL504_RS30110	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS30115	PF03328	HpcH/HpaI aldolase/citrate lyase family
AL504_RS30120	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
AL504_RS30120	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
AL504_RS30125	PF03466	LysR substrate binding domain
AL504_RS30125	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS30130	PF01649	Ribosomal protein S20
AL504_RS30140	PF03023	Lipid II flippase MurJ
AL504_RS30145	PF00106	short chain dehydrogenase
AL504_RS30150	PF05191	Adenylate kinase, active site lid
AL504_RS30155	PF02348	Cytidylyltransferase
AL504_RS30160	PF03966	Trm112p-like protein
AL504_RS30165	PF07095	Intracellular growth attenuator protein IgaA
AL504_RS30170	PF02606	Tetraacyldisaccharide-1-P 4'-kinase
AL504_RS30180	PF01618	MotA/TolQ/ExbB proton channel family
AL504_RS30185	PF13742	OB-fold nucleic acid binding domain
AL504_RS30185	PF02601	Exonuclease VII, large subunit
AL504_RS30195	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
AL504_RS30195	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
AL504_RS30200	PF00672	HAMP domain
AL504_RS30200	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL504_RS30200	PF02203	Tar ligand binding domain homologue
AL504_RS30205	PF00654	Voltage gated chloride channel
AL504_RS30210	PF00108	Thiolase, N-terminal domain
AL504_RS30210	PF02803	Thiolase, C-terminal domain
AL504_RS30220	PF00313	'Cold-shock' DNA-binding domain
AL504_RS30225	PF02617	ATP-dependent Clp protease adaptor protein ClpS
AL504_RS30230	PF07703	Alpha-2-macroglobulin bait region domain
AL504_RS30230	PF01835	MG2 domain
AL504_RS30230	PF17962	Bacterial macroglobulin domain 6
AL504_RS30230	PF00207	Alpha-2-macroglobulin family
AL504_RS30230	PF17970	Bacterial Alpha-2-macroglobulin MG1 domain 
AL504_RS30230	PF17972	Bacterial Alpha-2-macroglobulin MG5 domain
AL504_RS30230	PF17973	Bacterial Alpha-2-macroglobulin MG10 domain
AL504_RS30230	PF11974	Bacterial alpha-2-macroglobulin MG3 domain
AL504_RS30235	PF00905	Penicillin binding protein transpeptidase domain
AL504_RS30235	PF06832	Penicillin-Binding Protein C-terminus Family
AL504_RS30235	PF00912	Transglycosylase
AL504_RS30240	PF00004	ATPase family associated with various cellular activities (AAA)
AL504_RS30240	PF17871	AAA lid domain
AL504_RS30240	PF10431	C-terminal, D2-small domain, of ClpB protein 
AL504_RS30240	PF02861	Clp amino terminal domain, pathogenicity island component
AL504_RS30240	PF07724	AAA domain (Cdc48 subfamily)
AL504_RS30245	PF04403	Paraquat-inducible protein A
AL504_RS30250	PF02470	MlaD protein
AL504_RS30260	PF18327	Proline utilization A proline dehydrogenase N-terminal domain 
AL504_RS30260	PF14850	DNA-binding domain of Proline dehydrogenase
AL504_RS30260	PF01619	Proline dehydrogenase
AL504_RS30260	PF00171	Aldehyde dehydrogenase family
AL504_RS30265	PF13458	Periplasmic binding protein
AL504_RS30270	PF02653	Branched-chain amino acid transport system / permease component
AL504_RS30275	PF02653	Branched-chain amino acid transport system / permease component
AL504_RS30275	PF11862	Domain of unknown function (DUF3382)
AL504_RS30280	PF00005	ABC transporter
AL504_RS30280	PF12399	Branched-chain amino acid ATP-binding cassette transporter
AL504_RS30285	PF00005	ABC transporter
AL504_RS30290	PF13333	Integrase core domain
AL504_RS30290	PF00665	Integrase core domain
AL504_RS30290	PF13276	HTH-like domain
AL504_RS30305	PF07690	Major Facilitator Superfamily
AL504_RS30320	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS30320	PF03466	LysR substrate binding domain
AL504_RS30325	PF04632	Fusaric acid resistance protein family
AL504_RS30335	PF00529	HlyD membrane-fusion protein of T1SS
AL504_RS30335	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
AL504_RS30345	PF03466	LysR substrate binding domain
AL504_RS30345	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS30350	PF02798	Glutathione S-transferase, N-terminal domain
AL504_RS30350	PF00043	Glutathione S-transferase, C-terminal domain
AL504_RS30355	PF00296	Luciferase-like monooxygenase
AL504_RS30360	PF01566	Natural resistance-associated macrophage protein
AL504_RS30365	PF02566	OsmC-like protein
AL504_RS30370	PF02423	Ornithine cyclodeaminase/mu-crystallin family
AL504_RS30380	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL504_RS30385	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS30390	PF00528	Binding-protein-dependent transport system inner membrane component
AL504_RS30395	PF00005	ABC transporter
AL504_RS30400	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
AL504_RS30430	PF03575	Peptidase family S51
AL504_RS30440	PF03401	Tripartite tricarboxylate transporter family receptor
AL504_RS30445	PF04127	DNA / pantothenate metabolism flavoprotein
AL504_RS30445	PF02441	Flavoprotein
AL504_RS30450	PF01252	Signal peptidase (SPase) II
AL504_RS30455	PF08264	Anticodon-binding domain of tRNA
AL504_RS30455	PF00133	tRNA synthetases class I (I, L, M and V)
AL504_RS30455	PF06827	Zinc finger found in FPG and IleRS
AL504_RS30460	PF01687	Riboflavin kinase
AL504_RS30460	PF06574	FAD synthetase
AL504_RS30465	PF00551	Formyl transferase
AL504_RS30480	PF13542	Helix-turn-helix domain of transposase family ISL3
AL504_RS30480	PF14690	zinc-finger of transposase IS204/IS1001/IS1096/IS1165
AL504_RS30480	PF01610	Transposase
AL504_RS30485	PF00580	UvrD/REP helicase N-terminal domain
AL504_RS30485	PF13361	UvrD-like helicase C-terminal domain
AL504_RS30500	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS30505	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS30510	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS30525	PF12848	ABC transporter
AL504_RS30525	PF00005	ABC transporter
AL504_RS30530	PF05175	Methyltransferase small domain
AL504_RS30535	PF01546	Peptidase family M20/M25/M40
AL504_RS30535	PF07687	Peptidase dimerisation domain
AL504_RS30540	PF00132	Bacterial transferase hexapeptide (six repeats)
AL504_RS30540	PF14602	Hexapeptide repeat of succinyl-transferase
AL504_RS30540	PF14805	Tetrahydrodipicolinate N-succinyltransferase N-terminal
AL504_RS30545	PF00155	Aminotransferase class I and II
AL504_RS30710	PF00574	Clp protease
AL504_RS30860	PF00230	Major intrinsic protein
AL504_RS30875	PF01292	Prokaryotic cytochrome b561
AL504_RS30880	PF00793	DAHP synthetase I family
AL504_RS30905	PF08361	MAATS-type transcriptional repressor, C-terminal region
AL504_RS30905	PF00440	Bacterial regulatory proteins, tetR family
AL504_RS30930	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL504_RS30930	PF03466	LysR substrate binding domain
AL504_RS30935	PF01168	Alanine racemase, N-terminal domain
AL504_RS30935	PF14031	Putative serine dehydratase domain
AL504_RS30940	PF01042	Endoribonuclease L-PSP
AL504_RS30965	PF00313	'Cold-shock' DNA-binding domain
AL504_RS30975	PF00313	'Cold-shock' DNA-binding domain
AL504_RS30980	PF03350	Uncharacterized protein family, UPF0114
AL504_RS30985	PF01435	Peptidase family M48
AL504_RS30990	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AL504_RS30990	PF05698	Bacterial trigger factor protein (TF) C-terminus
AL504_RS30990	PF05697	Bacterial trigger factor protein (TF)
AL504_RS30995	PF00574	Clp protease
AL504_RS31000	PF10431	C-terminal, D2-small domain, of ClpB protein 
AL504_RS31000	PF06689	ClpX C4-type zinc finger
AL504_RS31000	PF07724	AAA domain (Cdc48 subfamily)
AL504_RS31005	PF00004	ATPase family associated with various cellular activities (AAA)
AL504_RS31005	PF02190	ATP-dependent protease La (LON) substrate-binding domain 
AL504_RS31005	PF05362	Lon protease (S16) C-terminal proteolytic domain
AL504_RS31010	PF01726	LexA DNA binding domain
AL504_RS31010	PF00717	Peptidase S24-like
AL504_RS31015	PF00155	Aminotransferase class I and II
AL504_RS31020	PF04851	Type III restriction enzyme, res subunit
AL504_RS31020	PF00271	Helicase conserved C-terminal domain
AL504_RS31020	PF12344	Ultra-violet resistance protein B
AL504_RS31020	PF02151	UvrB/uvrC motif
AL504_RS31020	PF17757	UvrB interaction domain
AL504_RS31025	PF01451	Low molecular weight phosphotyrosine protein phosphatase
AL504_RS31030	PF02082	Transcriptional regulator
AL504_RS31035	PF00266	Aminotransferase class-V
AL504_RS31040	PF01592	NifU-like N terminal domain
AL504_RS31045	PF01521	Iron-sulphur cluster biosynthesis
AL504_RS31050	PF07743	HSCB C-terminal oligomerisation domain
AL504_RS31055	PF00012	Hsp70 protein
AL504_RS31060	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL504_RS31065	PF04384	Iron-sulphur cluster assembly
AL504_RS31070	PF02142	MGS-like domain
AL504_RS31075	PF00593	TonB dependent receptor
AL504_RS31075	PF07715	TonB-dependent Receptor Plug Domain
AL504_RS31080	PF00378	Enoyl-CoA hydratase/isomerase
AL504_RS31085	PF00005	ABC transporter
AL504_RS31085	PF12399	Branched-chain amino acid ATP-binding cassette transporter
AL504_RS31105	PF00005	ABC transporter
AL504_RS31110	PF00501	AMP-binding enzyme
AL504_RS31115	PF02803	Thiolase, C-terminal domain
AL504_RS31115	PF00108	Thiolase, N-terminal domain
AL504_RS31120	PF17932	Tetracyclin repressor-like, C-terminal domain
AL504_RS31120	PF00440	Bacterial regulatory proteins, tetR family
AL504_RS31145	PF01168	Alanine racemase, N-terminal domain
AL504_RS31150	PF03594	Benzoate membrane transport protein
AL504_RS31155	PF00155	Aminotransferase class I and II
AL504_RS31155	PF00392	Bacterial regulatory proteins, gntR family
AL504_RS31165	PF00152	tRNA synthetases class II (D, K and N) 
AL504_RS31165	PF01336	OB-fold nucleic acid binding domain
AL504_RS31170	PF00106	short chain dehydrogenase
AL504_RS31175	PF03462	PCRF domain
AL504_RS31175	PF00472	RF-1 domain
AL504_RS31180	PF07690	Major Facilitator Superfamily
AL504_RS31185	PF03797	Autotransporter beta-domain
AL504_RS31190	PF01368	DHH family
AL504_RS31190	PF02272	DHHA1 domain
AL504_RS31190	PF17768	RecJ OB domain
