AL504_RS00195	PWY-6897	thiamin salvage II
AL504_RS00195	PWY-7356	thiamin salvage IV (yeast)
AL504_RS00195	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AL504_RS00370	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
AL504_RS00370	PWY-7494	choline degradation IV
AL504_RS00390	PWY-6454	vancomycin resistance I
AL504_RS00390	PWY-6901	superpathway of glucose and xylose degradation
AL504_RS00440	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
AL504_RS00440	PWY-7494	choline degradation IV
AL504_RS00515	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AL504_RS00515	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AL504_RS00515	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AL504_RS01030	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AL504_RS01110	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AL504_RS01110	PWY-6596	adenosine nucleotides degradation I
AL504_RS01110	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AL504_RS01115	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AL504_RS01355	PWY-4983	L-citrulline-nitric oxide cycle
AL504_RS01355	PWY-4984	urea cycle
AL504_RS01355	PWY-5	canavanine biosynthesis
AL504_RS01355	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL504_RS01355	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL504_RS01415	PWY-4261	glycerol degradation I
AL504_RS01420	PWY-4261	glycerol degradation I
AL504_RS01420	PWY-6118	glycerol-3-phosphate shuttle
AL504_RS01420	PWY-6952	glycerophosphodiester degradation
AL504_RS01435	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
AL504_RS01705	PWY-1361	benzoyl-CoA degradation I (aerobic)
AL504_RS01705	PWY-5109	2-methylbutanoate biosynthesis
AL504_RS01705	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AL504_RS01705	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AL504_RS01705	PWY-5177	glutaryl-CoA degradation
AL504_RS01705	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AL504_RS01705	PWY-6435	4-hydroxybenzoate biosynthesis V
AL504_RS01705	PWY-6583	pyruvate fermentation to butanol I
AL504_RS01705	PWY-6863	pyruvate fermentation to hexanol
AL504_RS01705	PWY-6883	pyruvate fermentation to butanol II
AL504_RS01705	PWY-6944	androstenedione degradation
AL504_RS01705	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AL504_RS01705	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AL504_RS01705	PWY-7007	methyl ketone biosynthesis
AL504_RS01705	PWY-7046	4-coumarate degradation (anaerobic)
AL504_RS01705	PWY-7094	fatty acid salvage
AL504_RS01705	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AL504_RS01705	PWY-735	jasmonic acid biosynthesis
AL504_RS01705	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AL504_RS01705	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AL504_RS01705	PWY-7726	AL504_RS01705
AL504_RS01745	PWY-1042	glycolysis IV (plant cytosol)
AL504_RS01745	PWY-1622	formaldehyde assimilation I (serine pathway)
AL504_RS01745	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AL504_RS01745	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL504_RS01745	PWY-5723	Rubisco shunt
AL504_RS01745	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL504_RS01745	PWY-6886	1-butanol autotrophic biosynthesis
AL504_RS01745	PWY-6901	superpathway of glucose and xylose degradation
AL504_RS01745	PWY-7003	glycerol degradation to butanol
AL504_RS01745	PWY-7124	ethylene biosynthesis V (engineered)
AL504_RS01745	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AL504_RS01760	PWY-6854	ethylene biosynthesis III (microbes)
AL504_RS02215	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AL504_RS02215	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AL504_RS02215	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL504_RS02215	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AL504_RS02215	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AL504_RS02215	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AL504_RS02340	PWY-7294	xylose degradation IV
AL504_RS02340	PWY-7295	L-arabinose degradation IV
AL504_RS02395	PWY-1281	sulfoacetaldehyde degradation I
AL504_RS02395	PWY-6637	sulfolactate degradation II
AL504_RS02400	PWY-1281	sulfoacetaldehyde degradation I
AL504_RS02400	PWY-5482	pyruvate fermentation to acetate II
AL504_RS02400	PWY-5485	pyruvate fermentation to acetate IV
AL504_RS02400	PWY-5497	purine nucleobases degradation II (anaerobic)
AL504_RS02400	PWY-6637	sulfolactate degradation II
AL504_RS02455	PWY-5663	tetrahydrobiopterin biosynthesis I
AL504_RS02455	PWY-5664	tetrahydrobiopterin biosynthesis II
AL504_RS02455	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AL504_RS02455	PWY-6703	preQ<sub>0</sub> biosynthesis
AL504_RS02455	PWY-6983	tetrahydrobiopterin biosynthesis III
AL504_RS02455	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AL504_RS02555	PWY-723	alkylnitronates degradation
AL504_RS02570	PWY-6174	mevalonate pathway II (archaea)
AL504_RS02570	PWY-7391	isoprene biosynthesis II (engineered)
AL504_RS02570	PWY-7524	mevalonate pathway III (archaea)
AL504_RS02570	PWY-922	mevalonate pathway I
AL504_RS02585	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL504_RS02585	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL504_RS02585	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL504_RS02590	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL504_RS02590	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL504_RS02590	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL504_RS02690	PWY-6823	molybdenum cofactor biosynthesis
AL504_RS02695	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AL504_RS02695	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL504_RS02695	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AL504_RS02695	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AL504_RS02745	PWY-5344	L-homocysteine biosynthesis
AL504_RS02745	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
AL504_RS02840	PWY-1042	glycolysis IV (plant cytosol)
AL504_RS02840	PWY-1622	formaldehyde assimilation I (serine pathway)
AL504_RS02840	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AL504_RS02840	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL504_RS02840	PWY-5723	Rubisco shunt
AL504_RS02840	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL504_RS02840	PWY-6886	1-butanol autotrophic biosynthesis
AL504_RS02840	PWY-6901	superpathway of glucose and xylose degradation
AL504_RS02840	PWY-7003	glycerol degradation to butanol
AL504_RS02840	PWY-7124	ethylene biosynthesis V (engineered)
AL504_RS02840	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AL504_RS02980	PWY-6936	seleno-amino acid biosynthesis
AL504_RS03000	PWY-5350	thiosulfate disproportionation III (rhodanese)
AL504_RS03085	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL504_RS03085	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL504_RS03130	PWY-723	alkylnitronates degradation
AL504_RS03230	PWY-6409	pyoverdine I biosynthesis
AL504_RS03230	PWY-6562	norspermidine biosynthesis
AL504_RS03230	PWY-761	rhizobactin 1021 biosynthesis
AL504_RS03330	PWY-5913	TCA cycle VI (obligate autotrophs)
AL504_RS03330	PWY-6549	L-glutamine biosynthesis III
AL504_RS03330	PWY-6728	methylaspartate cycle
AL504_RS03330	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL504_RS03330	PWY-7124	ethylene biosynthesis V (engineered)
AL504_RS03330	PWY-7254	TCA cycle VII (acetate-producers)
AL504_RS03330	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AL504_RS03410	PWY-6486	D-galacturonate degradation II
AL504_RS03410	PWY-6497	D-galactarate degradation II
AL504_RS03410	PWY-6499	D-glucarate degradation II
AL504_RS03410	PWY-6501	D-glucuronate degradation II
AL504_RS03420	PWY-6486	D-galacturonate degradation II
AL504_RS03420	PWY-6497	D-galactarate degradation II
AL504_RS03420	PWY-6499	D-glucarate degradation II
AL504_RS03420	PWY-6501	D-glucuronate degradation II
AL504_RS03425	PWY-6497	D-galactarate degradation II
AL504_RS03560	PWY-6936	seleno-amino acid biosynthesis
AL504_RS03605	PWY-43	putrescine biosynthesis II
AL504_RS03655	PWY-5747	2-methylcitrate cycle II
AL504_RS03745	PWY-7254	TCA cycle VII (acetate-producers)
AL504_RS03945	PWY-6936	seleno-amino acid biosynthesis
AL504_RS03975	PWY-6654	phosphopantothenate biosynthesis III
AL504_RS04195	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
AL504_RS04405	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AL504_RS04405	PWY-6164	3-dehydroquinate biosynthesis I
AL504_RS04405	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AL504_RS04445	PWY-5669	phosphatidylethanolamine biosynthesis I
AL504_RS04500	PWY-31	canavanine degradation
AL504_RS04500	PWY-4984	urea cycle
AL504_RS04500	PWY-6305	putrescine biosynthesis IV
AL504_RS04500	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AL504_RS04550	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AL504_RS04550	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AL504_RS04585	PWY-3341	L-proline biosynthesis III
AL504_RS04585	PWY-4981	L-proline biosynthesis II (from arginine)
AL504_RS04585	PWY-6344	L-ornithine degradation II (Stickland reaction)
AL504_RS04795	PWY-381	nitrate reduction II (assimilatory)
AL504_RS04795	PWY-5675	nitrate reduction V (assimilatory)
AL504_RS04795	PWY-6549	L-glutamine biosynthesis III
AL504_RS04795	PWY-6963	ammonia assimilation cycle I
AL504_RS04795	PWY-6964	ammonia assimilation cycle II
AL504_RS04805	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
AL504_RS04840	PWY-6617	adenosine nucleotides degradation III
AL504_RS04875	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AL504_RS04930	PWY-5381	pyridine nucleotide cycling (plants)
AL504_RS04990	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AL504_RS05025	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AL504_RS05025	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AL504_RS05025	PWY-5989	stearate biosynthesis II (bacteria and plants)
AL504_RS05025	PWY-6113	superpathway of mycolate biosynthesis
AL504_RS05025	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AL504_RS05025	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AL504_RS05025	PWY-7663	gondoate biosynthesis (anaerobic)
AL504_RS05025	PWY-7664	oleate biosynthesis IV (anaerobic)
AL504_RS05025	PWYG-321	mycolate biosynthesis
AL504_RS05150	PWY-5381	pyridine nucleotide cycling (plants)
AL504_RS05150	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AL504_RS05150	PWY-6596	adenosine nucleotides degradation I
AL504_RS05150	PWY-6606	guanosine nucleotides degradation II
AL504_RS05150	PWY-6607	guanosine nucleotides degradation I
AL504_RS05150	PWY-6608	guanosine nucleotides degradation III
AL504_RS05150	PWY-7185	UTP and CTP dephosphorylation I
AL504_RS05160	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
AL504_RS05160	PWY-5368	dimorphecolate biosynthesis
AL504_RS05160	PWY-5995	linoleate biosynthesis I (plants)
AL504_RS05160	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
AL504_RS05160	PWY-6803	phosphatidylcholine acyl editing
AL504_RS05160	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
AL504_RS05160	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AL504_RS05160	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AL504_RS05160	PWY-7470	phosphatidylcholine biosynthesis VII
AL504_RS05160	PWY-7618	ricinoleate biosynthesis
AL504_RS05455	PWY-4261	glycerol degradation I
AL504_RS05455	PWY-6118	glycerol-3-phosphate shuttle
AL504_RS05455	PWY-6952	glycerophosphodiester degradation
AL504_RS05550	PWY-6703	preQ<sub>0</sub> biosynthesis
AL504_RS05665	PWY-5381	pyridine nucleotide cycling (plants)
AL504_RS05905	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
AL504_RS05905	PWY-7494	choline degradation IV
AL504_RS06035	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL504_RS06080	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AL504_RS06080	PWY-622	starch biosynthesis
AL504_RS06090	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AL504_RS06090	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AL504_RS06090	PWY-5989	stearate biosynthesis II (bacteria and plants)
AL504_RS06090	PWY-5994	palmitate biosynthesis I (animals and fungi)
AL504_RS06090	PWY-6113	superpathway of mycolate biosynthesis
AL504_RS06090	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AL504_RS06090	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AL504_RS06090	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AL504_RS06090	PWY-7663	gondoate biosynthesis (anaerobic)
AL504_RS06090	PWY-7664	oleate biosynthesis IV (anaerobic)
AL504_RS06090	PWYG-321	mycolate biosynthesis
AL504_RS06115	PWY-7294	xylose degradation IV
AL504_RS06115	PWY-7295	L-arabinose degradation IV
AL504_RS06115	PWY-7560	methylerythritol phosphate pathway II
AL504_RS06120	PWY-5667	CDP-diacylglycerol biosynthesis I
AL504_RS06120	PWY-5981	CDP-diacylglycerol biosynthesis III
AL504_RS06175	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AL504_RS06175	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AL504_RS06175	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AL504_RS06175	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AL504_RS06190	PWY-2161	folate polyglutamylation
AL504_RS06275	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AL504_RS06525	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
AL504_RS06590	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AL504_RS06590	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AL504_RS06600	PWY-6891	thiazole biosynthesis II (Bacillus)
AL504_RS06600	PWY-6892	thiazole biosynthesis I (E. coli)
AL504_RS06600	PWY-7560	methylerythritol phosphate pathway II
AL504_RS06615	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AL504_RS06615	PWY-2201	folate transformations I
AL504_RS06615	PWY-3841	folate transformations II
AL504_RS06615	PWY-5030	L-histidine degradation III
AL504_RS06615	PWY-5497	purine nucleobases degradation II (anaerobic)
AL504_RS06615	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AL504_RS06665	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
AL504_RS06665	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
AL504_RS06665	PWY-6148	tetrahydromethanopterin biosynthesis
AL504_RS06720	PWY-4041	&gamma;-glutamyl cycle
AL504_RS06720	PWY-5826	hypoglycin biosynthesis
AL504_RS06820	PWY-5381	pyridine nucleotide cycling (plants)
AL504_RS06820	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AL504_RS06830	PWY-4983	L-citrulline-nitric oxide cycle
AL504_RS06830	PWY-4984	urea cycle
AL504_RS06830	PWY-5	canavanine biosynthesis
AL504_RS06830	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL504_RS06830	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL504_RS06840	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AL504_RS06840	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AL504_RS06855	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AL504_RS06915	PWY-6167	flavin biosynthesis II (archaea)
AL504_RS06915	PWY-6168	flavin biosynthesis III (fungi)
AL504_RS06915	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AL504_RS06960	PWY-6012	acyl carrier protein metabolism I
AL504_RS06960	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AL504_RS06975	PWY-723	alkylnitronates degradation
AL504_RS07025	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AL504_RS07395	PWY-5101	L-isoleucine biosynthesis II
AL504_RS07395	PWY-5103	L-isoleucine biosynthesis III
AL504_RS07395	PWY-5104	L-isoleucine biosynthesis IV
AL504_RS07395	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AL504_RS07410	PWY-1361	benzoyl-CoA degradation I (aerobic)
AL504_RS07410	PWY-5109	2-methylbutanoate biosynthesis
AL504_RS07410	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AL504_RS07410	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AL504_RS07410	PWY-5177	glutaryl-CoA degradation
AL504_RS07410	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AL504_RS07410	PWY-6435	4-hydroxybenzoate biosynthesis V
AL504_RS07410	PWY-6583	pyruvate fermentation to butanol I
AL504_RS07410	PWY-6863	pyruvate fermentation to hexanol
AL504_RS07410	PWY-6883	pyruvate fermentation to butanol II
AL504_RS07410	PWY-6944	androstenedione degradation
AL504_RS07410	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AL504_RS07410	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AL504_RS07410	PWY-7007	methyl ketone biosynthesis
AL504_RS07410	PWY-7046	4-coumarate degradation (anaerobic)
AL504_RS07410	PWY-7094	fatty acid salvage
AL504_RS07410	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AL504_RS07410	PWY-735	jasmonic acid biosynthesis
AL504_RS07410	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AL504_RS07410	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AL504_RS07410	PWY-7726	AL504_RS07410
AL504_RS07665	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AL504_RS07735	PWY-4081	glutathione redox reactions I
AL504_RS07755	PWY-6523	nitrite-dependent anaerobic methane oxidation
AL504_RS07755	PWY-6748	nitrate reduction VII (denitrification)
AL504_RS07755	PWY-7084	nitrifier denitrification
AL504_RS07775	PWY-3781	aerobic respiration I (cytochrome c)
AL504_RS07775	PWY-4521	arsenite oxidation I (respiratory)
AL504_RS07775	PWY-6692	Fe(II) oxidation
AL504_RS07775	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AL504_RS07785	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AL504_RS07785	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AL504_RS07835	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AL504_RS07835	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AL504_RS07880	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
AL504_RS07880	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AL504_RS07905	PWY-6012	acyl carrier protein metabolism I
AL504_RS07905	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AL504_RS07985	PWY-5367	petroselinate biosynthesis
AL504_RS07985	PWY-5515	L-arabinose degradation II
AL504_RS07985	PWY-5525	D-glucuronate degradation I
AL504_RS07985	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AL504_RS07985	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AL504_RS07985	PWY-5989	stearate biosynthesis II (bacteria and plants)
AL504_RS07985	PWY-5994	palmitate biosynthesis I (animals and fungi)
AL504_RS07985	PWY-6113	superpathway of mycolate biosynthesis
AL504_RS07985	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AL504_RS07985	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AL504_RS07985	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AL504_RS07985	PWY-7663	gondoate biosynthesis (anaerobic)
AL504_RS07985	PWY-7664	oleate biosynthesis IV (anaerobic)
AL504_RS07985	PWYG-321	mycolate biosynthesis
AL504_RS08465	PWY-5101	L-isoleucine biosynthesis II
AL504_RS08465	PWY-5103	L-isoleucine biosynthesis III
AL504_RS08465	PWY-5104	L-isoleucine biosynthesis IV
AL504_RS08465	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AL504_RS08535	PWY-2941	L-lysine biosynthesis II
AL504_RS08535	PWY-2942	L-lysine biosynthesis III
AL504_RS08535	PWY-5097	L-lysine biosynthesis VI
AL504_RS08535	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL504_RS08535	PWY-6559	spermidine biosynthesis II
AL504_RS08535	PWY-6562	norspermidine biosynthesis
AL504_RS08535	PWY-7153	grixazone biosynthesis
AL504_RS08535	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL504_RS08540	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AL504_RS08560	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AL504_RS08610	PWY-702	L-methionine biosynthesis II
AL504_RS09020	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AL504_RS09085	PWY-2201	folate transformations I
AL504_RS09090	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AL504_RS09090	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AL504_RS09090	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AL504_RS09090	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL504_RS09090	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AL504_RS09090	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AL504_RS09090	PWY-7205	CMP phosphorylation
AL504_RS09090	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AL504_RS09090	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL504_RS09090	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AL504_RS09090	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL504_RS09090	PWY-7224	purine deoxyribonucleosides salvage
AL504_RS09090	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AL504_RS09090	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AL504_RS09125	PWY-6829	tRNA methylation (yeast)
AL504_RS09125	PWY-7285	methylwyosine biosynthesis
AL504_RS09125	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
AL504_RS09175	PWY-5155	&beta;-alanine biosynthesis III
AL504_RS09195	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AL504_RS09195	PWY-6416	quinate degradation II
AL504_RS09195	PWY-6707	gallate biosynthesis
AL504_RS09200	PWY-6409	pyoverdine I biosynthesis
AL504_RS09200	PWY-6562	norspermidine biosynthesis
AL504_RS09200	PWY-761	rhizobactin 1021 biosynthesis
AL504_RS09255	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AL504_RS09290	PWY-6967	methylamine degradation I
AL504_RS09305	PWY-6967	methylamine degradation I
AL504_RS09375	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AL504_RS09375	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AL504_RS09375	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AL504_RS09380	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AL504_RS09380	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AL504_RS09385	PWY-5381	pyridine nucleotide cycling (plants)
AL504_RS09385	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AL504_RS09395	PWY-6825	phosphatidylcholine biosynthesis V
AL504_RS09865	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL504_RS09885	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AL504_RS09885	PWY-5723	Rubisco shunt
AL504_RS09895	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AL504_RS09940	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
AL504_RS09940	PWY-7676	Kdo8N transfer to lipid IV<sub>A</sub>
AL504_RS09980	PWY-4981	L-proline biosynthesis II (from arginine)
AL504_RS09980	PWY-4984	urea cycle
AL504_RS09980	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL504_RS10040	PWY-4983	L-citrulline-nitric oxide cycle
AL504_RS10040	PWY-4984	urea cycle
AL504_RS10040	PWY-5	canavanine biosynthesis
AL504_RS10040	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL504_RS10040	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL504_RS10160	PWY-7255	ergothioneine biosynthesis I (bacteria)
AL504_RS10365	PWY-6123	inosine-5'-phosphate biosynthesis I
AL504_RS10365	PWY-6124	inosine-5'-phosphate biosynthesis II
AL504_RS10365	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AL504_RS10365	PWY-7234	inosine-5'-phosphate biosynthesis III
AL504_RS10435	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AL504_RS10435	PWY-6164	3-dehydroquinate biosynthesis I
AL504_RS10435	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AL504_RS10575	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AL504_RS10575	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AL504_RS10580	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AL504_RS10580	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AL504_RS10595	PWY-5392	reductive TCA cycle II
AL504_RS10595	PWY-5537	pyruvate fermentation to acetate V
AL504_RS10595	PWY-5538	pyruvate fermentation to acetate VI
AL504_RS10595	PWY-5690	TCA cycle II (plants and fungi)
AL504_RS10595	PWY-5913	TCA cycle VI (obligate autotrophs)
AL504_RS10595	PWY-6728	methylaspartate cycle
AL504_RS10595	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL504_RS10595	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AL504_RS10600	PWY-5392	reductive TCA cycle II
AL504_RS10600	PWY-5537	pyruvate fermentation to acetate V
AL504_RS10600	PWY-5538	pyruvate fermentation to acetate VI
AL504_RS10600	PWY-5690	TCA cycle II (plants and fungi)
AL504_RS10600	PWY-5913	TCA cycle VI (obligate autotrophs)
AL504_RS10600	PWY-6728	methylaspartate cycle
AL504_RS10600	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL504_RS10600	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AL504_RS10615	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AL504_RS10615	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AL504_RS10615	PWY-6936	seleno-amino acid biosynthesis
AL504_RS10615	PWY-702	L-methionine biosynthesis II
AL504_RS10665	PWY-5686	UMP biosynthesis
AL504_RS10760	PWY-7294	xylose degradation IV
AL504_RS10760	PWY-7295	L-arabinose degradation IV
AL504_RS10805	PWY-5663	tetrahydrobiopterin biosynthesis I
AL504_RS10805	PWY-5664	tetrahydrobiopterin biosynthesis II
AL504_RS10805	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AL504_RS10805	PWY-6703	preQ<sub>0</sub> biosynthesis
AL504_RS10805	PWY-6983	tetrahydrobiopterin biosynthesis III
AL504_RS10805	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AL504_RS10810	PWY-6891	thiazole biosynthesis II (Bacillus)
AL504_RS10810	PWY-6892	thiazole biosynthesis I (E. coli)
AL504_RS10810	PWY-7560	methylerythritol phosphate pathway II
AL504_RS10880	PWY-5350	thiosulfate disproportionation III (rhodanese)
AL504_RS11065	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
AL504_RS11065	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
AL504_RS11065	PWY-7717	AL504_RS11065
AL504_RS11065	PWY-7733	AL504_RS11065
AL504_RS11065	PWY-7734	AL504_RS11065
AL504_RS11090	PWY-1341	phenylacetate degradation II (anaerobic)
AL504_RS11090	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
AL504_RS11090	PWY-7716	AL504_RS11090
AL504_RS11130	PWY-5176	coumarin biosynthesis (via 2-coumarate)
AL504_RS11140	PWY-6938	NADH repair
AL504_RS11185	PWY-5278	sulfite oxidation III
AL504_RS11185	PWY-5340	sulfate activation for sulfonation
AL504_RS11185	PWY-6683	sulfate reduction III (assimilatory)
AL504_RS11185	PWY-6932	selenate reduction
AL504_RS11190	PWY-5278	sulfite oxidation III
AL504_RS11190	PWY-5340	sulfate activation for sulfonation
AL504_RS11190	PWY-6683	sulfate reduction III (assimilatory)
AL504_RS11190	PWY-6932	selenate reduction
AL504_RS11235	PWY-5913	TCA cycle VI (obligate autotrophs)
AL504_RS11235	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
AL504_RS11235	PWY-6638	sulfolactate degradation III
AL504_RS11235	PWY-6642	(<i>R</i>)-cysteate degradation
AL504_RS11235	PWY-6643	coenzyme M biosynthesis II
AL504_RS11235	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AL504_RS11235	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AL504_RS11235	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AL504_RS11265	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
AL504_RS11265	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
AL504_RS11265	PWY-7717	AL504_RS11265
AL504_RS11265	PWY-7733	AL504_RS11265
AL504_RS11265	PWY-7734	AL504_RS11265
AL504_RS11280	PWY-6936	seleno-amino acid biosynthesis
AL504_RS11320	PWY-7205	CMP phosphorylation
AL504_RS11325	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AL504_RS11330	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
AL504_RS11340	PWY-3461	L-tyrosine biosynthesis II
AL504_RS11340	PWY-3462	L-phenylalanine biosynthesis II
AL504_RS11340	PWY-6120	L-tyrosine biosynthesis III
AL504_RS11340	PWY-6627	salinosporamide A biosynthesis
AL504_RS11340	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
AL504_RS11340	PWY-7626	bacilysin biosynthesis
AL504_RS11360	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
AL504_RS11360	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
AL504_RS11360	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
AL504_RS11360	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
AL504_RS11360	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
AL504_RS11360	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
AL504_RS11360	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
AL504_RS11360	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
AL504_RS11360	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
AL504_RS11360	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
AL504_RS11365	PWY-181	photorespiration
AL504_RS11415	PWY-7052	cyanophycin metabolism
AL504_RS11420	PWY-7052	cyanophycin metabolism
AL504_RS11480	PWY-5676	acetyl-CoA fermentation to butanoate II
AL504_RS11480	PWY-5741	ethylmalonyl-CoA pathway
AL504_RS11480	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AL504_RS11565	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AL504_RS11565	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AL504_RS11575	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AL504_RS11595	PWY-5691	urate degradation to allantoin I
AL504_RS11595	PWY-7394	urate degradation to allantoin II
AL504_RS11615	PWY-1281	sulfoacetaldehyde degradation I
AL504_RS11615	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AL504_RS11615	PWY-5482	pyruvate fermentation to acetate II
AL504_RS11615	PWY-5485	pyruvate fermentation to acetate IV
AL504_RS11615	PWY-5497	purine nucleobases degradation II (anaerobic)
AL504_RS11615	PWY-6637	sulfolactate degradation II
AL504_RS11615	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AL504_RS11640	PWY-3781	aerobic respiration I (cytochrome c)
AL504_RS11640	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AL504_RS11640	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AL504_RS11640	PWY-5690	TCA cycle II (plants and fungi)
AL504_RS11640	PWY-6728	methylaspartate cycle
AL504_RS11640	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL504_RS11640	PWY-7254	TCA cycle VII (acetate-producers)
AL504_RS11640	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AL504_RS11645	PWY-3781	aerobic respiration I (cytochrome c)
AL504_RS11645	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AL504_RS11645	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AL504_RS11645	PWY-5690	TCA cycle II (plants and fungi)
AL504_RS11645	PWY-6728	methylaspartate cycle
AL504_RS11645	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL504_RS11645	PWY-7254	TCA cycle VII (acetate-producers)
AL504_RS11645	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AL504_RS11665	PWY-1622	formaldehyde assimilation I (serine pathway)
AL504_RS11665	PWY-5392	reductive TCA cycle II
AL504_RS11665	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AL504_RS11665	PWY-5690	TCA cycle II (plants and fungi)
AL504_RS11665	PWY-5913	TCA cycle VI (obligate autotrophs)
AL504_RS11665	PWY-6728	methylaspartate cycle
AL504_RS11665	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL504_RS11665	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AL504_RS11665	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AL504_RS11670	PWY-5747	2-methylcitrate cycle II
AL504_RS11690	PWY-6825	phosphatidylcholine biosynthesis V
AL504_RS11740	PWY-1042	glycolysis IV (plant cytosol)
AL504_RS11740	PWY-1622	formaldehyde assimilation I (serine pathway)
AL504_RS11740	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AL504_RS11740	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL504_RS11740	PWY-5723	Rubisco shunt
AL504_RS11740	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL504_RS11740	PWY-6886	1-butanol autotrophic biosynthesis
AL504_RS11740	PWY-6901	superpathway of glucose and xylose degradation
AL504_RS11740	PWY-7003	glycerol degradation to butanol
AL504_RS11740	PWY-7124	ethylene biosynthesis V (engineered)
AL504_RS11740	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AL504_RS11750	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AL504_RS11750	PWY-7177	UTP and CTP dephosphorylation II
AL504_RS11750	PWY-7185	UTP and CTP dephosphorylation I
AL504_RS11770	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL504_RS11865	PWY-6672	<i>cis</i>-genanyl-CoA degradation
AL504_RS11865	PWY-7118	chitin degradation to ethanol
AL504_RS11880	PWY-3941	&beta;-alanine biosynthesis II
AL504_RS11880	PWY-5104	L-isoleucine biosynthesis IV
AL504_RS11880	PWY-5747	2-methylcitrate cycle II
AL504_RS11880	PWY-6672	<i>cis</i>-genanyl-CoA degradation
AL504_RS11880	PWY-7118	chitin degradation to ethanol
AL504_RS11900	PWY-5642	2,4-dinitrotoluene degradation
AL504_RS11900	PWY-6373	acrylate degradation
AL504_RS12030	PWY-5367	petroselinate biosynthesis
AL504_RS12030	PWY-5515	L-arabinose degradation II
AL504_RS12030	PWY-5525	D-glucuronate degradation I
AL504_RS12030	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AL504_RS12030	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AL504_RS12030	PWY-5989	stearate biosynthesis II (bacteria and plants)
AL504_RS12030	PWY-5994	palmitate biosynthesis I (animals and fungi)
AL504_RS12030	PWY-6113	superpathway of mycolate biosynthesis
AL504_RS12030	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AL504_RS12030	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AL504_RS12030	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AL504_RS12030	PWY-7663	gondoate biosynthesis (anaerobic)
AL504_RS12030	PWY-7664	oleate biosynthesis IV (anaerobic)
AL504_RS12030	PWYG-321	mycolate biosynthesis
AL504_RS12035	PWY-4381	fatty acid biosynthesis initiation I
AL504_RS12035	PWY-6799	fatty acid biosynthesis (plant mitochondria)
AL504_RS12035	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AL504_RS12040	PWY-4381	fatty acid biosynthesis initiation I
AL504_RS12065	PWY-2201	folate transformations I
AL504_RS12115	PWY-4381	fatty acid biosynthesis initiation I
AL504_RS12115	PWY-5743	3-hydroxypropanoate cycle
AL504_RS12115	PWY-5744	glyoxylate assimilation
AL504_RS12115	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AL504_RS12115	PWY-6679	jadomycin biosynthesis
AL504_RS12115	PWY-6722	candicidin biosynthesis
AL504_RS12115	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AL504_RS12130	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL504_RS12160	PWY-5381	pyridine nucleotide cycling (plants)
AL504_RS12320	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
AL504_RS12320	PWY-5368	dimorphecolate biosynthesis
AL504_RS12320	PWY-5995	linoleate biosynthesis I (plants)
AL504_RS12320	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
AL504_RS12320	PWY-6803	phosphatidylcholine acyl editing
AL504_RS12320	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
AL504_RS12320	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AL504_RS12320	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AL504_RS12320	PWY-7470	phosphatidylcholine biosynthesis VII
AL504_RS12320	PWY-7618	ricinoleate biosynthesis
AL504_RS12350	PWY-7560	methylerythritol phosphate pathway II
AL504_RS12355	PWY-7560	methylerythritol phosphate pathway II
AL504_RS12395	PWY-3781	aerobic respiration I (cytochrome c)
AL504_RS12395	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AL504_RS12395	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AL504_RS12395	PWY-6692	Fe(II) oxidation
AL504_RS12490	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AL504_RS12490	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AL504_RS12490	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AL504_RS12695	PWY-5676	acetyl-CoA fermentation to butanoate II
AL504_RS12695	PWY-5741	ethylmalonyl-CoA pathway
AL504_RS12695	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AL504_RS12915	PWY-1042	glycolysis IV (plant cytosol)
AL504_RS12915	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL504_RS12915	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL504_RS12915	PWY-7003	glycerol degradation to butanol
AL504_RS13015	PWY-5669	phosphatidylethanolamine biosynthesis I
AL504_RS13020	PWY-5103	L-isoleucine biosynthesis III
AL504_RS13020	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AL504_RS13025	PWY-5101	L-isoleucine biosynthesis II
AL504_RS13025	PWY-5103	L-isoleucine biosynthesis III
AL504_RS13025	PWY-5104	L-isoleucine biosynthesis IV
AL504_RS13025	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AL504_RS13025	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AL504_RS13025	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AL504_RS13025	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AL504_RS13030	PWY-5101	L-isoleucine biosynthesis II
AL504_RS13030	PWY-5103	L-isoleucine biosynthesis III
AL504_RS13030	PWY-5104	L-isoleucine biosynthesis IV
AL504_RS13030	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AL504_RS13030	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AL504_RS13030	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AL504_RS13030	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AL504_RS13070	PWY-1042	glycolysis IV (plant cytosol)
AL504_RS13070	PWY-1622	formaldehyde assimilation I (serine pathway)
AL504_RS13070	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AL504_RS13070	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL504_RS13070	PWY-5723	Rubisco shunt
AL504_RS13070	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL504_RS13070	PWY-6886	1-butanol autotrophic biosynthesis
AL504_RS13070	PWY-6901	superpathway of glucose and xylose degradation
AL504_RS13070	PWY-7003	glycerol degradation to butanol
AL504_RS13070	PWY-7124	ethylene biosynthesis V (engineered)
AL504_RS13070	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AL504_RS13100	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
AL504_RS13235	PWY-2941	L-lysine biosynthesis II
AL504_RS13235	PWY-2942	L-lysine biosynthesis III
AL504_RS13235	PWY-5097	L-lysine biosynthesis VI
AL504_RS13255	PWY-5913	TCA cycle VI (obligate autotrophs)
AL504_RS13255	PWY-6549	L-glutamine biosynthesis III
AL504_RS13255	PWY-6728	methylaspartate cycle
AL504_RS13255	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL504_RS13255	PWY-7124	ethylene biosynthesis V (engineered)
AL504_RS13255	PWY-7254	TCA cycle VII (acetate-producers)
AL504_RS13255	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AL504_RS13345	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AL504_RS13345	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AL504_RS13345	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AL504_RS13365	PWY-2941	L-lysine biosynthesis II
AL504_RS13365	PWY-2942	L-lysine biosynthesis III
AL504_RS13365	PWY-5097	L-lysine biosynthesis VI
AL504_RS13370	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AL504_RS13370	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AL504_RS13460	PWY-5686	UMP biosynthesis
AL504_RS13530	PWY-5057	L-valine degradation II
AL504_RS13530	PWY-5076	L-leucine degradation III
AL504_RS13530	PWY-5078	L-isoleucine degradation II
AL504_RS13530	PWY-5101	L-isoleucine biosynthesis II
AL504_RS13530	PWY-5103	L-isoleucine biosynthesis III
AL504_RS13530	PWY-5104	L-isoleucine biosynthesis IV
AL504_RS13530	PWY-5108	L-isoleucine biosynthesis V
AL504_RS13555	PWY-3801	sucrose degradation II (sucrose synthase)
AL504_RS13555	PWY-6527	stachyose degradation
AL504_RS13555	PWY-7238	sucrose biosynthesis II
AL504_RS13555	PWY-7343	UDP-glucose biosynthesis
AL504_RS13610	PWY-6123	inosine-5'-phosphate biosynthesis I
AL504_RS13610	PWY-6124	inosine-5'-phosphate biosynthesis II
AL504_RS13610	PWY-7234	inosine-5'-phosphate biosynthesis III
AL504_RS13670	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AL504_RS13815	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
AL504_RS13815	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
AL504_RS13815	PWY-7717	AL504_RS13815
AL504_RS13815	PWY-7733	AL504_RS13815
AL504_RS13815	PWY-7734	AL504_RS13815
AL504_RS13865	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AL504_RS13865	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AL504_RS13865	PWY-7242	D-fructuronate degradation
AL504_RS13865	PWY-7310	D-glucosaminate degradation
AL504_RS13865	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
AL504_RS13955	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AL504_RS13955	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AL504_RS13970	PWY-2201	folate transformations I
AL504_RS13970	PWY-5497	purine nucleobases degradation II (anaerobic)
AL504_RS14035	PWY-4041	&gamma;-glutamyl cycle
AL504_RS14035	PWY-5826	hypoglycin biosynthesis
AL504_RS14055	PWY-5392	reductive TCA cycle II
AL504_RS14055	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AL504_RS14055	PWY-5690	TCA cycle II (plants and fungi)
AL504_RS14055	PWY-5913	TCA cycle VI (obligate autotrophs)
AL504_RS14055	PWY-6728	methylaspartate cycle
AL504_RS14055	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL504_RS14055	PWY-7254	TCA cycle VII (acetate-producers)
AL504_RS14055	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AL504_RS14080	PWY-2781	<i>cis</i>-zeatin biosynthesis
AL504_RS14090	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AL504_RS14090	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AL504_RS14090	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AL504_RS14110	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AL504_RS14110	PWY-6148	tetrahydromethanopterin biosynthesis
AL504_RS14110	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AL504_RS14110	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AL504_RS14175	PWY-723	alkylnitronates degradation
AL504_RS14210	PWY-5392	reductive TCA cycle II
AL504_RS14210	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AL504_RS14210	PWY-5690	TCA cycle II (plants and fungi)
AL504_RS14210	PWY-5913	TCA cycle VI (obligate autotrophs)
AL504_RS14210	PWY-6728	methylaspartate cycle
AL504_RS14210	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL504_RS14210	PWY-7254	TCA cycle VII (acetate-producers)
AL504_RS14210	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AL504_RS14245	PWY-6832	2-aminoethylphosphonate degradation II
AL504_RS14250	PWY-5386	methylglyoxal degradation I
AL504_RS14270	PWY-1042	glycolysis IV (plant cytosol)
AL504_RS14270	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AL504_RS14270	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL504_RS14270	PWY-5723	Rubisco shunt
AL504_RS14270	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL504_RS14270	PWY-6886	1-butanol autotrophic biosynthesis
AL504_RS14270	PWY-6901	superpathway of glucose and xylose degradation
AL504_RS14270	PWY-7003	glycerol degradation to butanol
AL504_RS14270	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AL504_RS14270	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AL504_RS14325	PWY-7158	L-phenylalanine degradation V
AL504_RS14500	PWY-2301	<i>myo</i>-inositol biosynthesis
AL504_RS14500	PWY-4702	phytate degradation I
AL504_RS14500	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
AL504_RS14560	PWY-5331	taurine biosynthesis
AL504_RS14600	PWY-2201	folate transformations I
AL504_RS14600	PWY-5497	purine nucleobases degradation II (anaerobic)
AL504_RS14620	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AL504_RS14620	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AL504_RS14625	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AL504_RS14625	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AL504_RS14630	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AL504_RS14630	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AL504_RS14630	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AL504_RS14630	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AL504_RS14640	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AL504_RS14640	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AL504_RS14645	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AL504_RS14645	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AL504_RS14645	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AL504_RS14650	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AL504_RS14650	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AL504_RS14665	PWY-2201	folate transformations I
AL504_RS14685	PWY-5686	UMP biosynthesis
AL504_RS14760	PWY-5101	L-isoleucine biosynthesis II
AL504_RS14760	PWY-5103	L-isoleucine biosynthesis III
AL504_RS14760	PWY-5104	L-isoleucine biosynthesis IV
AL504_RS14760	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AL504_RS14800	PWY-4041	&gamma;-glutamyl cycle
AL504_RS14800	PWY-5826	hypoglycin biosynthesis
AL504_RS15090	PWY-5386	methylglyoxal degradation I
AL504_RS15100	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AL504_RS15100	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AL504_RS15100	PWY-5989	stearate biosynthesis II (bacteria and plants)
AL504_RS15100	PWY-6113	superpathway of mycolate biosynthesis
AL504_RS15100	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AL504_RS15100	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AL504_RS15100	PWY-7663	gondoate biosynthesis (anaerobic)
AL504_RS15100	PWY-7664	oleate biosynthesis IV (anaerobic)
AL504_RS15100	PWYG-321	mycolate biosynthesis
AL504_RS15120	PWY-5316	nicotine biosynthesis
AL504_RS15120	PWY-5381	pyridine nucleotide cycling (plants)
AL504_RS15120	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AL504_RS15120	PWY-7342	superpathway of nicotine biosynthesis
AL504_RS15145	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AL504_RS15220	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AL504_RS15330	PWY-6840	homoglutathione biosynthesis
AL504_RS15330	PWY-7255	ergothioneine biosynthesis I (bacteria)
AL504_RS15400	PWY-5525	D-glucuronate degradation I
AL504_RS15420	PWY-1622	formaldehyde assimilation I (serine pathway)
AL504_RS15420	PWY-181	photorespiration
AL504_RS15420	PWY-2161	folate polyglutamylation
AL504_RS15420	PWY-2201	folate transformations I
AL504_RS15420	PWY-3661	glycine betaine degradation I
AL504_RS15420	PWY-3661-1	glycine betaine degradation II (mammalian)
AL504_RS15420	PWY-3841	folate transformations II
AL504_RS15420	PWY-5497	purine nucleobases degradation II (anaerobic)
AL504_RS15460	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL504_RS15460	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL504_RS15540	PWY-5392	reductive TCA cycle II
AL504_RS15540	PWY-5537	pyruvate fermentation to acetate V
AL504_RS15540	PWY-5538	pyruvate fermentation to acetate VI
AL504_RS15540	PWY-5690	TCA cycle II (plants and fungi)
AL504_RS15540	PWY-5913	TCA cycle VI (obligate autotrophs)
AL504_RS15540	PWY-6728	methylaspartate cycle
AL504_RS15540	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL504_RS15540	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AL504_RS15545	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AL504_RS15585	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AL504_RS15585	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AL504_RS15585	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AL504_RS15585	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AL504_RS15585	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL504_RS15585	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL504_RS15585	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AL504_RS15585	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AL504_RS15590	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AL504_RS15590	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AL504_RS15590	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AL504_RS15590	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AL504_RS15590	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL504_RS15590	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL504_RS15590	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AL504_RS15590	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AL504_RS15660	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AL504_RS15660	PWY-6416	quinate degradation II
AL504_RS15660	PWY-6707	gallate biosynthesis
AL504_RS15810	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AL504_RS15810	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AL504_RS15810	PWY-6897	thiamin salvage II
AL504_RS15810	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AL504_RS15810	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AL504_RS15810	PWY-7356	thiamin salvage IV (yeast)
AL504_RS15810	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AL504_RS15815	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AL504_RS15960	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL504_RS15970	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AL504_RS15970	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AL504_RS15970	PWY-6897	thiamin salvage II
AL504_RS15970	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AL504_RS15970	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AL504_RS15970	PWY-7356	thiamin salvage IV (yeast)
AL504_RS15970	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AL504_RS16060	PWY-4261	glycerol degradation I
AL504_RS16090	PWY-3461	L-tyrosine biosynthesis II
AL504_RS16090	PWY-3462	L-phenylalanine biosynthesis II
AL504_RS16090	PWY-6120	L-tyrosine biosynthesis III
AL504_RS16090	PWY-6627	salinosporamide A biosynthesis
AL504_RS16090	PWY-7626	bacilysin biosynthesis
AL504_RS16245	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AL504_RS16250	PWY-6531	mannitol cycle
AL504_RS16255	PWY-1042	glycolysis IV (plant cytosol)
AL504_RS16255	PWY-1622	formaldehyde assimilation I (serine pathway)
AL504_RS16255	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AL504_RS16255	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL504_RS16255	PWY-5723	Rubisco shunt
AL504_RS16255	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL504_RS16255	PWY-6886	1-butanol autotrophic biosynthesis
AL504_RS16255	PWY-6901	superpathway of glucose and xylose degradation
AL504_RS16255	PWY-7003	glycerol degradation to butanol
AL504_RS16255	PWY-7124	ethylene biosynthesis V (engineered)
AL504_RS16255	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AL504_RS16295	PWY-2201	folate transformations I
AL504_RS16295	PWY-3841	folate transformations II
AL504_RS16310	PWY-6891	thiazole biosynthesis II (Bacillus)
AL504_RS16310	PWY-6892	thiazole biosynthesis I (E. coli)
AL504_RS16315	PWY-6910	hydroxymethylpyrimidine salvage
AL504_RS16315	PWY-7356	thiamin salvage IV (yeast)
AL504_RS16315	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AL504_RS16355	PWY-5839	menaquinol-7 biosynthesis
AL504_RS16355	PWY-5844	menaquinol-9 biosynthesis
AL504_RS16355	PWY-5849	menaquinol-6 biosynthesis
AL504_RS16355	PWY-5890	menaquinol-10 biosynthesis
AL504_RS16355	PWY-5891	menaquinol-11 biosynthesis
AL504_RS16355	PWY-5892	menaquinol-12 biosynthesis
AL504_RS16355	PWY-5895	menaquinol-13 biosynthesis
AL504_RS16480	PWY-5344	L-homocysteine biosynthesis
AL504_RS16540	PWY-6840	homoglutathione biosynthesis
AL504_RS16540	PWY-7255	ergothioneine biosynthesis I (bacteria)
AL504_RS16645	PWY-1361	benzoyl-CoA degradation I (aerobic)
AL504_RS16645	PWY-5109	2-methylbutanoate biosynthesis
AL504_RS16645	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AL504_RS16645	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AL504_RS16645	PWY-5177	glutaryl-CoA degradation
AL504_RS16645	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AL504_RS16645	PWY-6435	4-hydroxybenzoate biosynthesis V
AL504_RS16645	PWY-6583	pyruvate fermentation to butanol I
AL504_RS16645	PWY-6863	pyruvate fermentation to hexanol
AL504_RS16645	PWY-6883	pyruvate fermentation to butanol II
AL504_RS16645	PWY-6944	androstenedione degradation
AL504_RS16645	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AL504_RS16645	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AL504_RS16645	PWY-7007	methyl ketone biosynthesis
AL504_RS16645	PWY-7046	4-coumarate degradation (anaerobic)
AL504_RS16645	PWY-7094	fatty acid salvage
AL504_RS16645	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AL504_RS16645	PWY-735	jasmonic acid biosynthesis
AL504_RS16645	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AL504_RS16645	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AL504_RS16645	PWY-7726	AL504_RS16645
AL504_RS16665	PWY-723	alkylnitronates degradation
AL504_RS16785	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AL504_RS16785	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AL504_RS16800	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AL504_RS16880	PWY-5033	nicotinate degradation II
AL504_RS16880	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AL504_RS16880	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AL504_RS16880	PWY-6993	nicotine degradation II (pyrrolidine pathway)
AL504_RS16880	PWY-7128	nicotine degradation III (VPP pathway)
AL504_RS16880	PWY-722	nicotinate degradation I
AL504_RS16950	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
AL504_RS16965	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AL504_RS16965	PWY-6148	tetrahydromethanopterin biosynthesis
AL504_RS16965	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AL504_RS16965	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AL504_RS17000	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AL504_RS17000	PWY-5723	Rubisco shunt
AL504_RS17005	PWY-181	photorespiration
AL504_RS17010	PWY-5958	acridone alkaloid biosynthesis
AL504_RS17010	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AL504_RS17010	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AL504_RS17015	PWY-5958	acridone alkaloid biosynthesis
AL504_RS17015	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AL504_RS17015	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AL504_RS17210	PWY-7723	AL504_RS17210
AL504_RS17375	PWY-5028	L-histidine degradation II
AL504_RS17375	PWY-5030	L-histidine degradation III
AL504_RS17380	PWY-5028	L-histidine degradation II
AL504_RS17380	PWY-5030	L-histidine degradation III
AL504_RS17390	PWY-5028	L-histidine degradation II
AL504_RS17390	PWY-5030	L-histidine degradation III
AL504_RS17410	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AL504_RS17410	PWY-3162	L-tryptophan degradation V (side chain pathway)
AL504_RS17410	PWY-5057	L-valine degradation II
AL504_RS17410	PWY-5076	L-leucine degradation III
AL504_RS17410	PWY-5078	L-isoleucine degradation II
AL504_RS17410	PWY-5079	L-phenylalanine degradation III
AL504_RS17410	PWY-5082	L-methionine degradation III
AL504_RS17410	PWY-5480	pyruvate fermentation to ethanol I
AL504_RS17410	PWY-5486	pyruvate fermentation to ethanol II
AL504_RS17410	PWY-5751	phenylethanol biosynthesis
AL504_RS17410	PWY-6313	serotonin degradation
AL504_RS17410	PWY-6333	acetaldehyde biosynthesis I
AL504_RS17410	PWY-6342	noradrenaline and adrenaline degradation
AL504_RS17410	PWY-6454	vancomycin resistance I
AL504_RS17410	PWY-6587	pyruvate fermentation to ethanol III
AL504_RS17410	PWY-6802	salidroside biosynthesis
AL504_RS17410	PWY-6871	3-methylbutanol biosynthesis
AL504_RS17410	PWY-6901	superpathway of glucose and xylose degradation
AL504_RS17410	PWY-7013	L-1,2-propanediol degradation
AL504_RS17410	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AL504_RS17410	PWY-7118	chitin degradation to ethanol
AL504_RS17410	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AL504_RS17470	PWY-40	putrescine biosynthesis I
AL504_RS17470	PWY-6305	putrescine biosynthesis IV
AL504_RS17485	PWY-6654	phosphopantothenate biosynthesis III
AL504_RS17575	PWY-2201	folate transformations I
AL504_RS17575	PWY-3841	folate transformations II
AL504_RS17610	PWY-6749	CMP-legionaminate biosynthesis I
AL504_RS17635	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
AL504_RS17645	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AL504_RS17645	PWY-5667	CDP-diacylglycerol biosynthesis I
AL504_RS17645	PWY-6453	stigma estolide biosynthesis
AL504_RS17645	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AL504_RS17645	PWY-7587	oleate biosynthesis III (cyanobacteria)
AL504_RS17705	PWY-3781	aerobic respiration I (cytochrome c)
AL504_RS17705	PWY-4521	arsenite oxidation I (respiratory)
AL504_RS17705	PWY-6692	Fe(II) oxidation
AL504_RS17705	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AL504_RS17740	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AL504_RS17825	PWY-723	alkylnitronates degradation
AL504_RS17870	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AL504_RS17870	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AL504_RS17960	PWY-3781	aerobic respiration I (cytochrome c)
AL504_RS17960	PWY-6692	Fe(II) oxidation
AL504_RS17960	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
AL504_RS17960	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AL504_RS18025	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
AL504_RS18395	PWY-6871	3-methylbutanol biosynthesis
AL504_RS18400	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AL504_RS18490	PWY-6936	seleno-amino acid biosynthesis
AL504_RS18550	PWY-4381	fatty acid biosynthesis initiation I
AL504_RS18550	PWY-5743	3-hydroxypropanoate cycle
AL504_RS18550	PWY-5744	glyoxylate assimilation
AL504_RS18550	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AL504_RS18550	PWY-6679	jadomycin biosynthesis
AL504_RS18550	PWY-6722	candicidin biosynthesis
AL504_RS18550	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AL504_RS18595	PWY-5392	reductive TCA cycle II
AL504_RS18595	PWY-5537	pyruvate fermentation to acetate V
AL504_RS18595	PWY-5538	pyruvate fermentation to acetate VI
AL504_RS18595	PWY-5690	TCA cycle II (plants and fungi)
AL504_RS18595	PWY-5913	TCA cycle VI (obligate autotrophs)
AL504_RS18595	PWY-6728	methylaspartate cycle
AL504_RS18595	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL504_RS18595	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AL504_RS18790	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AL504_RS18845	PWY-5101	L-isoleucine biosynthesis II
AL504_RS18845	PWY-5103	L-isoleucine biosynthesis III
AL504_RS18845	PWY-5104	L-isoleucine biosynthesis IV
AL504_RS18845	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AL504_RS18845	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AL504_RS18845	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AL504_RS18845	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AL504_RS18865	PWY-6167	flavin biosynthesis II (archaea)
AL504_RS18865	PWY-6168	flavin biosynthesis III (fungi)
AL504_RS18900	PWY-6654	phosphopantothenate biosynthesis III
AL504_RS19345	PWY-6936	seleno-amino acid biosynthesis
AL504_RS19385	PWY-381	nitrate reduction II (assimilatory)
AL504_RS19385	PWY-5675	nitrate reduction V (assimilatory)
AL504_RS19385	PWY-6549	L-glutamine biosynthesis III
AL504_RS19385	PWY-6963	ammonia assimilation cycle I
AL504_RS19385	PWY-6964	ammonia assimilation cycle II
AL504_RS19635	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AL504_RS19635	PWY-622	starch biosynthesis
AL504_RS19645	PWY-6655	xanthan biosynthesis
AL504_RS19645	PWY-6658	acetan biosynthesis
AL504_RS19650	PWY-5659	GDP-mannose biosynthesis
AL504_RS19650	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
AL504_RS19670	PWY-1001	cellulose biosynthesis
AL504_RS19685	PWY-6788	cellulose degradation II (fungi)
AL504_RS19875	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AL504_RS19875	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AL504_RS19900	PWY-2941	L-lysine biosynthesis II
AL504_RS19900	PWY-2942	L-lysine biosynthesis III
AL504_RS19900	PWY-5097	L-lysine biosynthesis VI
AL504_RS19915	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AL504_RS19920	PWY-6164	3-dehydroquinate biosynthesis I
AL504_RS19980	PWY-6728	methylaspartate cycle
AL504_RS19980	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL504_RS19980	PWY-7118	chitin degradation to ethanol
AL504_RS19980	PWY-7294	xylose degradation IV
AL504_RS19980	PWY-7295	L-arabinose degradation IV
AL504_RS20020	PWY-2941	L-lysine biosynthesis II
AL504_RS20020	PWY-2942	L-lysine biosynthesis III
AL504_RS20020	PWY-5097	L-lysine biosynthesis VI
AL504_RS20035	PWY-4381	fatty acid biosynthesis initiation I
AL504_RS20090	PWY-3221	dTDP-L-rhamnose biosynthesis II
AL504_RS20090	PWY-6808	dTDP-D-forosamine biosynthesis
AL504_RS20090	PWY-6942	dTDP-D-desosamine biosynthesis
AL504_RS20090	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AL504_RS20090	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AL504_RS20090	PWY-6974	dTDP-L-olivose biosynthesis
AL504_RS20090	PWY-6976	dTDP-L-mycarose biosynthesis
AL504_RS20090	PWY-7104	dTDP-L-megosamine biosynthesis
AL504_RS20090	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AL504_RS20090	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AL504_RS20090	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AL504_RS20090	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AL504_RS20090	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AL504_RS20090	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AL504_RS20090	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AL504_RS20090	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AL504_RS20090	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AL504_RS20090	PWY-7688	AL504_RS20090
AL504_RS20100	PWY-3221	dTDP-L-rhamnose biosynthesis II
AL504_RS20100	PWY-6808	dTDP-D-forosamine biosynthesis
AL504_RS20100	PWY-6942	dTDP-D-desosamine biosynthesis
AL504_RS20100	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AL504_RS20100	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AL504_RS20100	PWY-6974	dTDP-L-olivose biosynthesis
AL504_RS20100	PWY-6976	dTDP-L-mycarose biosynthesis
AL504_RS20100	PWY-7104	dTDP-L-megosamine biosynthesis
AL504_RS20100	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AL504_RS20100	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AL504_RS20100	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AL504_RS20100	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AL504_RS20100	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AL504_RS20100	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AL504_RS20100	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AL504_RS20100	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AL504_RS20100	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AL504_RS20100	PWY-7688	AL504_RS20100
AL504_RS20110	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AL504_RS20110	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AL504_RS20110	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AL504_RS20170	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AL504_RS20190	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
AL504_RS20190	PWY-6749	CMP-legionaminate biosynthesis I
AL504_RS20190	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
AL504_RS20190	PWY-7102	bisabolene biosynthesis
AL504_RS20190	PWY-7131	CMP-legionaminate biosynthesis II
AL504_RS20190	PWY-7721	AL504_RS20190
AL504_RS20190	PWY-7736	AL504_RS20190
AL504_RS20265	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
AL504_RS20270	PWY-3961	phosphopantothenate biosynthesis II
AL504_RS20305	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AL504_RS20305	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AL504_RS20320	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AL504_RS20320	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AL504_RS20335	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AL504_RS20335	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AL504_RS20340	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AL504_RS20340	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AL504_RS20340	PWY-6268	adenosylcobalamin salvage from cobalamin
AL504_RS20340	PWY-6269	adenosylcobalamin salvage from cobinamide II
AL504_RS20410	PWY-2941	L-lysine biosynthesis II
AL504_RS20410	PWY-5097	L-lysine biosynthesis VI
AL504_RS20425	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AL504_RS20425	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
AL504_RS20430	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AL504_RS20480	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AL504_RS20490	PWY-2201	folate transformations I
AL504_RS20490	PWY-3841	folate transformations II
AL504_RS20565	PWY-6899	base-degraded thiamin salvage
AL504_RS20565	PWY-7356	thiamin salvage IV (yeast)
AL504_RS20760	PWY-5686	UMP biosynthesis
AL504_RS20775	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AL504_RS20835	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL504_RS20835	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL504_RS20855	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
AL504_RS20865	PWY-2201	folate transformations I
AL504_RS20930	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AL504_RS20930	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AL504_RS20970	PWY-6605	adenine and adenosine salvage II
AL504_RS20970	PWY-6610	adenine and adenosine salvage IV
AL504_RS21015	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AL504_RS21035	PWY-5074	mevalonate degradation
AL504_RS21100	PWY-6825	phosphatidylcholine biosynthesis V
AL504_RS21130	PWY-6840	homoglutathione biosynthesis
AL504_RS21130	PWY-7255	ergothioneine biosynthesis I (bacteria)
AL504_RS21145	PWY-6004	glycine betaine biosynthesis V (from glycine)
AL504_RS21155	PWY-5667	CDP-diacylglycerol biosynthesis I
AL504_RS21155	PWY-5981	CDP-diacylglycerol biosynthesis III
AL504_RS21175	PWY-1622	formaldehyde assimilation I (serine pathway)
AL504_RS21175	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL504_RS21210	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
AL504_RS21230	PWY-3341	L-proline biosynthesis III
AL504_RS21230	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AL504_RS21425	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AL504_RS21460	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
AL504_RS21460	PWY-5389	3-methylthiopropanoate biosynthesis
AL504_RS21495	PWY-6683	sulfate reduction III (assimilatory)
AL504_RS21585	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AL504_RS21585	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL504_RS21585	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AL504_RS21585	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AL504_RS21600	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
AL504_RS21600	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
AL504_RS21600	PWY-7717	AL504_RS21600
AL504_RS21600	PWY-7733	AL504_RS21600
AL504_RS21600	PWY-7734	AL504_RS21600
AL504_RS21605	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
AL504_RS21615	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
AL504_RS21645	PWY-1361	benzoyl-CoA degradation I (aerobic)
AL504_RS21645	PWY-5109	2-methylbutanoate biosynthesis
AL504_RS21645	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AL504_RS21645	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AL504_RS21645	PWY-5177	glutaryl-CoA degradation
AL504_RS21645	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AL504_RS21645	PWY-6435	4-hydroxybenzoate biosynthesis V
AL504_RS21645	PWY-6583	pyruvate fermentation to butanol I
AL504_RS21645	PWY-6863	pyruvate fermentation to hexanol
AL504_RS21645	PWY-6883	pyruvate fermentation to butanol II
AL504_RS21645	PWY-6944	androstenedione degradation
AL504_RS21645	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AL504_RS21645	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AL504_RS21645	PWY-7007	methyl ketone biosynthesis
AL504_RS21645	PWY-7046	4-coumarate degradation (anaerobic)
AL504_RS21645	PWY-7094	fatty acid salvage
AL504_RS21645	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AL504_RS21645	PWY-735	jasmonic acid biosynthesis
AL504_RS21645	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AL504_RS21645	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AL504_RS21645	PWY-7726	AL504_RS21645
AL504_RS21650	PWY-1622	formaldehyde assimilation I (serine pathway)
AL504_RS21650	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AL504_RS21650	PWY-5913	TCA cycle VI (obligate autotrophs)
AL504_RS21650	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL504_RS21650	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
AL504_RS21650	PWY-6549	L-glutamine biosynthesis III
AL504_RS21650	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AL504_RS21650	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AL504_RS21650	PWY-7124	ethylene biosynthesis V (engineered)
AL504_RS21655	PWY-6703	preQ<sub>0</sub> biosynthesis
AL504_RS21680	PWY-6871	3-methylbutanol biosynthesis
AL504_RS21695	PWY-5101	L-isoleucine biosynthesis II
AL504_RS21695	PWY-5103	L-isoleucine biosynthesis III
AL504_RS21695	PWY-5104	L-isoleucine biosynthesis IV
AL504_RS21695	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AL504_RS21705	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AL504_RS21705	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AL504_RS21895	PWY-5694	allantoin degradation to glyoxylate I
AL504_RS21895	PWY-5705	allantoin degradation to glyoxylate III
AL504_RS22005	PWY-4261	glycerol degradation I
AL504_RS22115	PWY-1042	glycolysis IV (plant cytosol)
AL504_RS22115	PWY-1622	formaldehyde assimilation I (serine pathway)
AL504_RS22115	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AL504_RS22115	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL504_RS22115	PWY-5723	Rubisco shunt
AL504_RS22115	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL504_RS22115	PWY-6886	1-butanol autotrophic biosynthesis
AL504_RS22115	PWY-6901	superpathway of glucose and xylose degradation
AL504_RS22115	PWY-7003	glycerol degradation to butanol
AL504_RS22115	PWY-7124	ethylene biosynthesis V (engineered)
AL504_RS22115	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AL504_RS22120	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AL504_RS22120	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AL504_RS22120	PWY-7242	D-fructuronate degradation
AL504_RS22120	PWY-7310	D-glucosaminate degradation
AL504_RS22120	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
AL504_RS22125	PWY-7130	L-glucose degradation
AL504_RS22290	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AL504_RS22300	PWY-2201	folate transformations I
AL504_RS22330	PWY-5392	reductive TCA cycle II
AL504_RS22330	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AL504_RS22330	PWY-5690	TCA cycle II (plants and fungi)
AL504_RS22330	PWY-5913	TCA cycle VI (obligate autotrophs)
AL504_RS22330	PWY-6728	methylaspartate cycle
AL504_RS22330	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL504_RS22330	PWY-7254	TCA cycle VII (acetate-producers)
AL504_RS22330	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AL504_RS22400	PWY-4983	L-citrulline-nitric oxide cycle
AL504_RS22400	PWY-4984	urea cycle
AL504_RS22400	PWY-5	canavanine biosynthesis
AL504_RS22400	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL504_RS22400	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL504_RS22450	PWY-6986	alginate degradation
AL504_RS22490	PWY-5028	L-histidine degradation II
AL504_RS22490	PWY-5030	L-histidine degradation III
AL504_RS22595	PWY-5676	acetyl-CoA fermentation to butanoate II
AL504_RS22595	PWY-5741	ethylmalonyl-CoA pathway
AL504_RS22595	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AL504_RS22735	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL504_RS22770	PWY-6854	ethylene biosynthesis III (microbes)
AL504_RS22805	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AL504_RS22835	PWY-5642	2,4-dinitrotoluene degradation
AL504_RS22835	PWY-6373	acrylate degradation
AL504_RS22850	PWY-3841	folate transformations II
AL504_RS22850	PWY-6614	tetrahydrofolate biosynthesis
AL504_RS22860	PWY-3841	folate transformations II
AL504_RS22860	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AL504_RS22860	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL504_RS22860	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AL504_RS22860	PWY-7199	pyrimidine deoxyribonucleosides salvage
AL504_RS22860	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AL504_RS22875	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AL504_RS22875	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AL504_RS22875	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AL504_RS22920	PWY-4041	&gamma;-glutamyl cycle
AL504_RS22920	PWY-5826	hypoglycin biosynthesis
AL504_RS22925	PWY-3801	sucrose degradation II (sucrose synthase)
AL504_RS22925	PWY-5054	sorbitol biosynthesis I
AL504_RS22925	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
AL504_RS22925	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AL504_RS22925	PWY-5659	GDP-mannose biosynthesis
AL504_RS22925	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL504_RS22925	PWY-621	sucrose degradation III (sucrose invertase)
AL504_RS22925	PWY-622	starch biosynthesis
AL504_RS22925	PWY-6981	chitin biosynthesis
AL504_RS22925	PWY-6992	1,5-anhydrofructose degradation
AL504_RS22925	PWY-7238	sucrose biosynthesis II
AL504_RS22925	PWY-7347	sucrose biosynthesis III
AL504_RS22925	PWY-7385	1,3-propanediol biosynthesis (engineered)
AL504_RS22930	PWY-6749	CMP-legionaminate biosynthesis I
AL504_RS23045	PWY-7560	methylerythritol phosphate pathway II
AL504_RS23065	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
AL504_RS23135	PWY-6825	phosphatidylcholine biosynthesis V
AL504_RS23190	PWY-6167	flavin biosynthesis II (archaea)
AL504_RS23190	PWY-6168	flavin biosynthesis III (fungi)
AL504_RS23190	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AL504_RS23195	PWY-6167	flavin biosynthesis II (archaea)
AL504_RS23195	PWY-6168	flavin biosynthesis III (fungi)
AL504_RS23205	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AL504_RS23205	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AL504_RS23205	PWY-6896	thiamin salvage I
AL504_RS23205	PWY-6897	thiamin salvage II
AL504_RS23210	PWY-5269	cardiolipin biosynthesis II
AL504_RS23210	PWY-5668	cardiolipin biosynthesis I
AL504_RS23220	PWY-5686	UMP biosynthesis
AL504_RS23230	PWY-7039	phosphatidate metabolism, as a signaling molecule
AL504_RS23235	PWY-6531	mannitol cycle
AL504_RS23265	PWY-5647	2-nitrobenzoate degradation I
AL504_RS23265	PWY-5652	2-amino-3-carboxymuconate semialdehyde degradation to glutaryl-CoA
AL504_RS23265	PWY-5654	2-amino-3-carboxymuconate semialdehyde degradation to 2-oxopentenoate
AL504_RS23270	PWY-5647	2-nitrobenzoate degradation I
AL504_RS23270	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
AL504_RS23270	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
AL504_RS23270	PWY-6505	L-tryptophan degradation XII (Geobacillus)
AL504_RS23355	PWY-2941	L-lysine biosynthesis II
AL504_RS23355	PWY-2942	L-lysine biosynthesis III
AL504_RS23355	PWY-5097	L-lysine biosynthesis VI
AL504_RS23630	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
AL504_RS23630	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
AL504_RS23630	PWY-7717	AL504_RS23630
AL504_RS23630	PWY-7733	AL504_RS23630
AL504_RS23630	PWY-7734	AL504_RS23630
AL504_RS23640	PWY-5350	thiosulfate disproportionation III (rhodanese)
AL504_RS23655	PWY-6123	inosine-5'-phosphate biosynthesis I
AL504_RS23655	PWY-6124	inosine-5'-phosphate biosynthesis II
AL504_RS23655	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AL504_RS23655	PWY-7234	inosine-5'-phosphate biosynthesis III
AL504_RS23720	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AL504_RS23760	PWY-6857	retinol biosynthesis
AL504_RS23800	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL504_RS24145	PWY-5350	thiosulfate disproportionation III (rhodanese)
AL504_RS24240	PWY-1042	glycolysis IV (plant cytosol)
AL504_RS24240	PWY-1622	formaldehyde assimilation I (serine pathway)
AL504_RS24240	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AL504_RS24240	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL504_RS24240	PWY-5723	Rubisco shunt
AL504_RS24240	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL504_RS24240	PWY-6886	1-butanol autotrophic biosynthesis
AL504_RS24240	PWY-6901	superpathway of glucose and xylose degradation
AL504_RS24240	PWY-7003	glycerol degradation to butanol
AL504_RS24240	PWY-7124	ethylene biosynthesis V (engineered)
AL504_RS24240	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AL504_RS24295	PWY-6683	sulfate reduction III (assimilatory)
AL504_RS24365	PWY-5350	thiosulfate disproportionation III (rhodanese)
AL504_RS24405	PWY-3781	aerobic respiration I (cytochrome c)
AL504_RS24405	PWY-4521	arsenite oxidation I (respiratory)
AL504_RS24405	PWY-6692	Fe(II) oxidation
AL504_RS24405	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AL504_RS24405	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
AL504_RS24485	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AL504_RS24485	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AL504_RS24485	PWY-6936	seleno-amino acid biosynthesis
AL504_RS24485	PWY-702	L-methionine biosynthesis II
AL504_RS24740	PWY-1281	sulfoacetaldehyde degradation I
AL504_RS24740	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AL504_RS24740	PWY-5482	pyruvate fermentation to acetate II
AL504_RS24740	PWY-5485	pyruvate fermentation to acetate IV
AL504_RS24740	PWY-5497	purine nucleobases degradation II (anaerobic)
AL504_RS24740	PWY-6637	sulfolactate degradation II
AL504_RS24740	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AL504_RS24785	PWY-3781	aerobic respiration I (cytochrome c)
AL504_RS24785	PWY-4521	arsenite oxidation I (respiratory)
AL504_RS24785	PWY-6692	Fe(II) oxidation
AL504_RS24785	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AL504_RS24785	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
AL504_RS24855	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL504_RS24870	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
AL504_RS24870	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
AL504_RS25005	PWY-4202	arsenate detoxification I (glutaredoxin)
AL504_RS25005	PWY-4621	arsenate detoxification II (glutaredoxin)
AL504_RS25050	PWY-5169	cyanurate degradation
AL504_RS25050	PWY-5703	urea degradation I
AL504_RS25050	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AL504_RS25055	PWY-5169	cyanurate degradation
AL504_RS25055	PWY-5703	urea degradation I
AL504_RS25160	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AL504_RS25160	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AL504_RS25205	PWY-1881	formate oxidation to CO<sub>2</sub>
AL504_RS25205	PWY-5497	purine nucleobases degradation II (anaerobic)
AL504_RS25205	PWY-6696	oxalate degradation III
AL504_RS25225	PWY-6823	molybdenum cofactor biosynthesis
AL504_RS25230	PWY-5964	guanylyl molybdenum cofactor biosynthesis
AL504_RS25230	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
AL504_RS25245	PWY-6823	molybdenum cofactor biosynthesis
AL504_RS25290	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AL504_RS25410	PWY-6700	queuosine biosynthesis
AL504_RS25415	PWY-6700	queuosine biosynthesis
AL504_RS25440	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AL504_RS25440	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AL504_RS25445	PWY-7183	pyrimidine nucleobases salvage I
AL504_RS25450	PWY-5194	siroheme biosynthesis
AL504_RS25450	PWY-5441	S-methyl-L-methionine cycle
AL504_RS25450	PWY-702	L-methionine biosynthesis II
AL504_RS25450	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AL504_RS25490	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
AL504_RS25490	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
AL504_RS25490	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
AL504_RS25490	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
AL504_RS25490	PWY-6978	plastoquinol-9 biosynthesis II
AL504_RS25515	PWY-1281	sulfoacetaldehyde degradation I
AL504_RS25515	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AL504_RS25515	PWY-5482	pyruvate fermentation to acetate II
AL504_RS25515	PWY-5485	pyruvate fermentation to acetate IV
AL504_RS25515	PWY-5497	purine nucleobases degradation II (anaerobic)
AL504_RS25515	PWY-6637	sulfolactate degradation II
AL504_RS25515	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AL504_RS25530	PWY-2201	folate transformations I
AL504_RS25545	PWY-1042	glycolysis IV (plant cytosol)
AL504_RS25545	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL504_RS25545	PWY-6901	superpathway of glucose and xylose degradation
AL504_RS25545	PWY-7003	glycerol degradation to butanol
AL504_RS25550	PWY-1042	glycolysis IV (plant cytosol)
AL504_RS25550	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL504_RS25550	PWY-6886	1-butanol autotrophic biosynthesis
AL504_RS25550	PWY-6901	superpathway of glucose and xylose degradation
AL504_RS25550	PWY-7003	glycerol degradation to butanol
AL504_RS25565	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AL504_RS25565	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AL504_RS25565	PWY-5989	stearate biosynthesis II (bacteria and plants)
AL504_RS25565	PWY-6113	superpathway of mycolate biosynthesis
AL504_RS25565	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AL504_RS25565	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AL504_RS25565	PWY-7663	gondoate biosynthesis (anaerobic)
AL504_RS25565	PWY-7664	oleate biosynthesis IV (anaerobic)
AL504_RS25565	PWYG-321	mycolate biosynthesis
AL504_RS25570	PWY-5482	pyruvate fermentation to acetate II
AL504_RS25570	PWY-5485	pyruvate fermentation to acetate IV
AL504_RS25570	PWY-5497	purine nucleobases degradation II (anaerobic)
AL504_RS25575	PWY-1281	sulfoacetaldehyde degradation I
AL504_RS25575	PWY-5482	pyruvate fermentation to acetate II
AL504_RS25575	PWY-5485	pyruvate fermentation to acetate IV
AL504_RS25575	PWY-5497	purine nucleobases degradation II (anaerobic)
AL504_RS25575	PWY-6637	sulfolactate degradation II
AL504_RS25670	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AL504_RS25710	PWY-5532	adenosine nucleotides degradation IV
AL504_RS25715	PWY-5532	adenosine nucleotides degradation IV
AL504_RS25720	PWY-7399	methylphosphonate degradation II
AL504_RS25730	PWY-7399	methylphosphonate degradation II
AL504_RS25745	PWY-7399	methylphosphonate degradation II
AL504_RS25755	PWY-7399	methylphosphonate degradation II
AL504_RS25760	PWY-7399	methylphosphonate degradation II
AL504_RS25785	PWY-1042	glycolysis IV (plant cytosol)
AL504_RS25785	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AL504_RS25785	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL504_RS25785	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL504_RS25785	PWY-7385	1,3-propanediol biosynthesis (engineered)
AL504_RS25790	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AL504_RS25795	PWY-6123	inosine-5'-phosphate biosynthesis I
AL504_RS25795	PWY-6124	inosine-5'-phosphate biosynthesis II
AL504_RS25795	PWY-7234	inosine-5'-phosphate biosynthesis III
AL504_RS25805	PWY-6123	inosine-5'-phosphate biosynthesis I
AL504_RS25805	PWY-7234	inosine-5'-phosphate biosynthesis III
AL504_RS25915	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AL504_RS25920	PWY-1361	benzoyl-CoA degradation I (aerobic)
AL504_RS25925	PWY-6085	2,4-dichlorophenoxyacetate  degradation
AL504_RS25925	PWY-6086	4-chloro-2-methylphenoxyacetate degradation
AL504_RS25930	PWY-101	photosynthesis light reactions
AL504_RS25930	PWY-6085	2,4-dichlorophenoxyacetate  degradation
AL504_RS25930	PWY-6086	4-chloro-2-methylphenoxyacetate degradation
AL504_RS25930	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
AL504_RS26045	PWY-723	alkylnitronates degradation
AL504_RS26145	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AL504_RS26145	PWY-5723	Rubisco shunt
AL504_RS26150	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL504_RS26150	PWY-5686	UMP biosynthesis
AL504_RS26150	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL504_RS26155	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL504_RS26155	PWY-5686	UMP biosynthesis
AL504_RS26155	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL504_RS26230	PWY-6614	tetrahydrofolate biosynthesis
AL504_RS26235	PWY-6749	CMP-legionaminate biosynthesis I
AL504_RS26380	PWY-5747	2-methylcitrate cycle II
AL504_RS26545	PWY-7425	2-chloroacrylate degradation I
AL504_RS26565	PWY-1361	benzoyl-CoA degradation I (aerobic)
AL504_RS26565	PWY-5109	2-methylbutanoate biosynthesis
AL504_RS26565	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AL504_RS26565	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AL504_RS26565	PWY-5177	glutaryl-CoA degradation
AL504_RS26565	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AL504_RS26565	PWY-6435	4-hydroxybenzoate biosynthesis V
AL504_RS26565	PWY-6583	pyruvate fermentation to butanol I
AL504_RS26565	PWY-6863	pyruvate fermentation to hexanol
AL504_RS26565	PWY-6883	pyruvate fermentation to butanol II
AL504_RS26565	PWY-6944	androstenedione degradation
AL504_RS26565	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AL504_RS26565	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AL504_RS26565	PWY-7007	methyl ketone biosynthesis
AL504_RS26565	PWY-7046	4-coumarate degradation (anaerobic)
AL504_RS26565	PWY-7094	fatty acid salvage
AL504_RS26565	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AL504_RS26565	PWY-735	jasmonic acid biosynthesis
AL504_RS26565	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AL504_RS26565	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AL504_RS26565	PWY-7726	AL504_RS26565
AL504_RS26585	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AL504_RS26605	PWY-3341	L-proline biosynthesis III
AL504_RS26605	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AL504_RS26640	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AL504_RS26640	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AL504_RS26840	PWY-6834	spermidine biosynthesis III
AL504_RS26900	PWY-6012	acyl carrier protein metabolism I
AL504_RS26900	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AL504_RS26905	PWY-6902	chitin degradation II
AL504_RS26915	PWY-5269	cardiolipin biosynthesis II
AL504_RS26915	PWY-5668	cardiolipin biosynthesis I
AL504_RS26940	PWY-6700	queuosine biosynthesis
AL504_RS26945	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL504_RS26960	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AL504_RS26970	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AL504_RS26970	PWY-6578	8-amino-7-oxononanoate biosynthesis III
AL504_RS26970	PWY-7147	8-amino-7-oxononanoate biosynthesis II
AL504_RS26990	PWY-3781	aerobic respiration I (cytochrome c)
AL504_RS26990	PWY-4521	arsenite oxidation I (respiratory)
AL504_RS26990	PWY-6692	Fe(II) oxidation
AL504_RS26990	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AL504_RS26995	PWY-3781	aerobic respiration I (cytochrome c)
AL504_RS26995	PWY-4521	arsenite oxidation I (respiratory)
AL504_RS26995	PWY-6692	Fe(II) oxidation
AL504_RS26995	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AL504_RS27025	PWY-6803	phosphatidylcholine acyl editing
AL504_RS27025	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AL504_RS27025	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AL504_RS27025	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
AL504_RS27230	PWY-4041	&gamma;-glutamyl cycle
AL504_RS27230	PWY-5826	hypoglycin biosynthesis
AL504_RS27520	PWY-2941	L-lysine biosynthesis II
AL504_RS27520	PWY-2942	L-lysine biosynthesis III
AL504_RS27520	PWY-5097	L-lysine biosynthesis VI
AL504_RS27555	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AL504_RS27555	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AL504_RS27670	PWY-5169	cyanurate degradation
AL504_RS27670	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AL504_RS27770	PWY-2301	<i>myo</i>-inositol biosynthesis
AL504_RS27770	PWY-4702	phytate degradation I
AL504_RS27770	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
AL504_RS27805	PWY-6748	nitrate reduction VII (denitrification)
AL504_RS27805	PWY-7084	nitrifier denitrification
AL504_RS27825	PWY-5686	UMP biosynthesis
AL504_RS27840	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
AL504_RS27870	PWY-4381	fatty acid biosynthesis initiation I
AL504_RS27870	PWY-5743	3-hydroxypropanoate cycle
AL504_RS27870	PWY-5744	glyoxylate assimilation
AL504_RS27870	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AL504_RS27870	PWY-6679	jadomycin biosynthesis
AL504_RS27870	PWY-6722	candicidin biosynthesis
AL504_RS27870	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AL504_RS27880	PWY-2941	L-lysine biosynthesis II
AL504_RS27880	PWY-2942	L-lysine biosynthesis III
AL504_RS27880	PWY-5097	L-lysine biosynthesis VI
AL504_RS27880	PWY-6559	spermidine biosynthesis II
AL504_RS27880	PWY-6562	norspermidine biosynthesis
AL504_RS27880	PWY-7153	grixazone biosynthesis
AL504_RS27910	PWY-3781	aerobic respiration I (cytochrome c)
AL504_RS27910	PWY-4521	arsenite oxidation I (respiratory)
AL504_RS27910	PWY-6692	Fe(II) oxidation
AL504_RS27910	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AL504_RS27915	PWY-3781	aerobic respiration I (cytochrome c)
AL504_RS27915	PWY-4521	arsenite oxidation I (respiratory)
AL504_RS27915	PWY-6692	Fe(II) oxidation
AL504_RS27915	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AL504_RS28040	PWY-5331	taurine biosynthesis
AL504_RS28075	PWY-7294	xylose degradation IV
AL504_RS28075	PWY-7295	L-arabinose degradation IV
AL504_RS28130	PWY-1361	benzoyl-CoA degradation I (aerobic)
AL504_RS28130	PWY-5109	2-methylbutanoate biosynthesis
AL504_RS28130	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AL504_RS28130	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AL504_RS28130	PWY-5177	glutaryl-CoA degradation
AL504_RS28130	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AL504_RS28130	PWY-6435	4-hydroxybenzoate biosynthesis V
AL504_RS28130	PWY-6583	pyruvate fermentation to butanol I
AL504_RS28130	PWY-6863	pyruvate fermentation to hexanol
AL504_RS28130	PWY-6883	pyruvate fermentation to butanol II
AL504_RS28130	PWY-6944	androstenedione degradation
AL504_RS28130	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AL504_RS28130	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AL504_RS28130	PWY-7007	methyl ketone biosynthesis
AL504_RS28130	PWY-7046	4-coumarate degradation (anaerobic)
AL504_RS28130	PWY-7094	fatty acid salvage
AL504_RS28130	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AL504_RS28130	PWY-735	jasmonic acid biosynthesis
AL504_RS28130	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AL504_RS28130	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AL504_RS28130	PWY-7726	AL504_RS28130
AL504_RS28140	PWY-1361	benzoyl-CoA degradation I (aerobic)
AL504_RS28140	PWY-5109	2-methylbutanoate biosynthesis
AL504_RS28140	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AL504_RS28140	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AL504_RS28140	PWY-5177	glutaryl-CoA degradation
AL504_RS28140	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AL504_RS28140	PWY-6435	4-hydroxybenzoate biosynthesis V
AL504_RS28140	PWY-6583	pyruvate fermentation to butanol I
AL504_RS28140	PWY-6863	pyruvate fermentation to hexanol
AL504_RS28140	PWY-6883	pyruvate fermentation to butanol II
AL504_RS28140	PWY-6944	androstenedione degradation
AL504_RS28140	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AL504_RS28140	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AL504_RS28140	PWY-7007	methyl ketone biosynthesis
AL504_RS28140	PWY-7046	4-coumarate degradation (anaerobic)
AL504_RS28140	PWY-7094	fatty acid salvage
AL504_RS28140	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AL504_RS28140	PWY-735	jasmonic acid biosynthesis
AL504_RS28140	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AL504_RS28140	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AL504_RS28140	PWY-7726	AL504_RS28140
AL504_RS28210	PWY-5481	pyruvate fermentation to lactate
AL504_RS28210	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
AL504_RS28210	PWY-6901	superpathway of glucose and xylose degradation
AL504_RS28215	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
AL504_RS28215	PWY-5739	GDP-D-perosamine biosynthesis
AL504_RS28215	PWY-5740	GDP-L-colitose biosynthesis
AL504_RS28215	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
AL504_RS28215	PWY-7573	GDP-mycosamine biosynthesis
AL504_RS28225	PWY-5659	GDP-mannose biosynthesis
AL504_RS28225	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
AL504_RS28235	PWY-6655	xanthan biosynthesis
AL504_RS28235	PWY-6658	acetan biosynthesis
AL504_RS28250	PWY-6749	CMP-legionaminate biosynthesis I
AL504_RS28255	PWY-3801	sucrose degradation II (sucrose synthase)
AL504_RS28255	PWY-5054	sorbitol biosynthesis I
AL504_RS28255	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
AL504_RS28255	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AL504_RS28255	PWY-5659	GDP-mannose biosynthesis
AL504_RS28255	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL504_RS28255	PWY-621	sucrose degradation III (sucrose invertase)
AL504_RS28255	PWY-622	starch biosynthesis
AL504_RS28255	PWY-6981	chitin biosynthesis
AL504_RS28255	PWY-6992	1,5-anhydrofructose degradation
AL504_RS28255	PWY-7238	sucrose biosynthesis II
AL504_RS28255	PWY-7347	sucrose biosynthesis III
AL504_RS28255	PWY-7385	1,3-propanediol biosynthesis (engineered)
AL504_RS28260	PWY-3821	galactose degradation III
AL504_RS28260	PWY-6317	galactose degradation I (Leloir pathway)
AL504_RS28260	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AL504_RS28260	PWY-6527	stachyose degradation
AL504_RS28260	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AL504_RS28260	PWY-7344	UDP-D-galactose biosynthesis
AL504_RS28550	PWY-1361	benzoyl-CoA degradation I (aerobic)
AL504_RS28550	PWY-5109	2-methylbutanoate biosynthesis
AL504_RS28550	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AL504_RS28550	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AL504_RS28550	PWY-5177	glutaryl-CoA degradation
AL504_RS28550	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AL504_RS28550	PWY-6435	4-hydroxybenzoate biosynthesis V
AL504_RS28550	PWY-6583	pyruvate fermentation to butanol I
AL504_RS28550	PWY-6863	pyruvate fermentation to hexanol
AL504_RS28550	PWY-6883	pyruvate fermentation to butanol II
AL504_RS28550	PWY-6944	androstenedione degradation
AL504_RS28550	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AL504_RS28550	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AL504_RS28550	PWY-7007	methyl ketone biosynthesis
AL504_RS28550	PWY-7046	4-coumarate degradation (anaerobic)
AL504_RS28550	PWY-7094	fatty acid salvage
AL504_RS28550	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AL504_RS28550	PWY-735	jasmonic acid biosynthesis
AL504_RS28550	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AL504_RS28550	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AL504_RS28550	PWY-7726	AL504_RS28550
AL504_RS28570	PWY-6891	thiazole biosynthesis II (Bacillus)
AL504_RS28570	PWY-6892	thiazole biosynthesis I (E. coli)
AL504_RS28570	PWY-7560	methylerythritol phosphate pathway II
AL504_RS28580	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AL504_RS28585	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
AL504_RS28585	PWY-7494	choline degradation IV
AL504_RS28590	PWY-1042	glycolysis IV (plant cytosol)
AL504_RS28590	PWY-1622	formaldehyde assimilation I (serine pathway)
AL504_RS28590	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AL504_RS28590	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL504_RS28590	PWY-5723	Rubisco shunt
AL504_RS28590	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL504_RS28590	PWY-6886	1-butanol autotrophic biosynthesis
AL504_RS28590	PWY-6901	superpathway of glucose and xylose degradation
AL504_RS28590	PWY-7003	glycerol degradation to butanol
AL504_RS28590	PWY-7124	ethylene biosynthesis V (engineered)
AL504_RS28590	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AL504_RS28805	PWY-2661	trehalose biosynthesis V
AL504_RS28815	PWY-2661	trehalose biosynthesis V
AL504_RS28815	PWY-6902	chitin degradation II
AL504_RS28825	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AL504_RS28825	PWY-622	starch biosynthesis
AL504_RS28830	PWY-2622	trehalose biosynthesis IV
AL504_RS28840	PWY-622	starch biosynthesis
AL504_RS28885	PWY-3801	sucrose degradation II (sucrose synthase)
AL504_RS28885	PWY-5054	sorbitol biosynthesis I
AL504_RS28885	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
AL504_RS28885	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AL504_RS28885	PWY-5659	GDP-mannose biosynthesis
AL504_RS28885	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL504_RS28885	PWY-621	sucrose degradation III (sucrose invertase)
AL504_RS28885	PWY-622	starch biosynthesis
AL504_RS28885	PWY-6981	chitin biosynthesis
AL504_RS28885	PWY-6992	1,5-anhydrofructose degradation
AL504_RS28885	PWY-7238	sucrose biosynthesis II
AL504_RS28885	PWY-7347	sucrose biosynthesis III
AL504_RS28885	PWY-7385	1,3-propanediol biosynthesis (engineered)
AL504_RS28980	PWY-5532	adenosine nucleotides degradation IV
AL504_RS28980	PWY-5723	Rubisco shunt
AL504_RS29075	PWY-5692	allantoin degradation to glyoxylate II
AL504_RS29075	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
AL504_RS29170	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AL504_RS29170	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AL504_RS29175	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AL504_RS29175	PWY-6416	quinate degradation II
AL504_RS29175	PWY-6707	gallate biosynthesis
AL504_RS29230	PWY-6012	acyl carrier protein metabolism I
AL504_RS29230	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AL504_RS29370	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AL504_RS29370	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AL504_RS29570	PWY-1361	benzoyl-CoA degradation I (aerobic)
AL504_RS29570	PWY-5109	2-methylbutanoate biosynthesis
AL504_RS29570	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AL504_RS29570	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AL504_RS29570	PWY-5177	glutaryl-CoA degradation
AL504_RS29570	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AL504_RS29570	PWY-6435	4-hydroxybenzoate biosynthesis V
AL504_RS29570	PWY-6583	pyruvate fermentation to butanol I
AL504_RS29570	PWY-6863	pyruvate fermentation to hexanol
AL504_RS29570	PWY-6883	pyruvate fermentation to butanol II
AL504_RS29570	PWY-6944	androstenedione degradation
AL504_RS29570	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AL504_RS29570	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AL504_RS29570	PWY-7007	methyl ketone biosynthesis
AL504_RS29570	PWY-7046	4-coumarate degradation (anaerobic)
AL504_RS29570	PWY-7094	fatty acid salvage
AL504_RS29570	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AL504_RS29570	PWY-735	jasmonic acid biosynthesis
AL504_RS29570	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AL504_RS29570	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AL504_RS29570	PWY-7726	AL504_RS29570
AL504_RS29575	PWY-5667	CDP-diacylglycerol biosynthesis I
AL504_RS29575	PWY-5981	CDP-diacylglycerol biosynthesis III
AL504_RS29705	PWY-6610	adenine and adenosine salvage IV
AL504_RS29815	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AL504_RS30015	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AL504_RS30120	PWY-2941	L-lysine biosynthesis II
AL504_RS30120	PWY-2942	L-lysine biosynthesis III
AL504_RS30120	PWY-5097	L-lysine biosynthesis VI
AL504_RS30150	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AL504_RS30155	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AL504_RS30195	PWY-6854	ethylene biosynthesis III (microbes)
AL504_RS30210	PWY-1361	benzoyl-CoA degradation I (aerobic)
AL504_RS30210	PWY-2361	3-oxoadipate degradation
AL504_RS30210	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
AL504_RS30260	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
AL504_RS30260	PWY-6853	ethylene biosynthesis II (microbes)
AL504_RS30260	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AL504_RS30460	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
AL504_RS30460	PWY-6167	flavin biosynthesis II (archaea)
AL504_RS30460	PWY-6168	flavin biosynthesis III (fungi)
AL504_RS30465	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AL504_RS30465	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AL504_RS30490	PWY-3461	L-tyrosine biosynthesis II
AL504_RS30490	PWY-3462	L-phenylalanine biosynthesis II
AL504_RS30490	PWY-6120	L-tyrosine biosynthesis III
AL504_RS30490	PWY-6627	salinosporamide A biosynthesis
AL504_RS30490	PWY-7626	bacilysin biosynthesis
AL504_RS30880	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AL504_RS30880	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AL504_RS30935	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AL504_RS31015	PWY-5913	TCA cycle VI (obligate autotrophs)
AL504_RS31015	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
AL504_RS31015	PWY-6638	sulfolactate degradation III
AL504_RS31015	PWY-6642	(<i>R</i>)-cysteate degradation
AL504_RS31015	PWY-6643	coenzyme M biosynthesis II
AL504_RS31015	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AL504_RS31015	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AL504_RS31015	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AL504_RS31035	PWY-6823	molybdenum cofactor biosynthesis
AL504_RS31035	PWY-6891	thiazole biosynthesis II (Bacillus)
AL504_RS31035	PWY-6892	thiazole biosynthesis I (E. coli)
AL504_RS31035	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AL504_RS31145	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
